BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014484
(423 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 104/222 (46%), Gaps = 36/222 (16%)
Query: 47 LANLIGCCYEADERLLVAEFMPNETLAKHLFHW-ETQP-MKWAMRLRVALYLAQALEY-- 102
L L G C ERLLV +M N ++A L E+QP + W R R+AL A+ L Y
Sbjct: 97 LLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLH 156
Query: 103 --CSSKGRALYHDLNAYRILFDKDGNPRLSSFGL-----MKNSRDGKSYSTNLAFTPPEY 155
C K ++ D+ A IL D++ + FGL K+ + + PEY
Sbjct: 157 DHCDPK--IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEY 214
Query: 156 MRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIR------------------SKNF 197
+ TG+ + ++ V+ +G MLL+L++G+ A DL R K
Sbjct: 215 LSTGKSSEKTDVFGYGVMLLELITGQR-----AFDLARLANDDDVMLLDWVKGLLKEKKL 269
Query: 198 LLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
L+D L+G++ ++E +L+++A C QS ERP +V
Sbjct: 270 EALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVV 311
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 104/217 (47%), Gaps = 26/217 (11%)
Query: 47 LANLIGCCYEADERLLVAEFMPNETLAKHLFHW-ETQP-MKWAMRLRVALYLAQALEY-- 102
L L G C ERLLV +M N ++A L E+QP + W R R+AL A+ L Y
Sbjct: 89 LLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLH 148
Query: 103 --CSSKGRALYHDLNAYRILFDKDGNPRLSSFGL-----MKNSRDGKSYSTNLAFTPPEY 155
C K ++ D+ A IL D++ + FGL K+ + + PEY
Sbjct: 149 DHCDPK--IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEY 206
Query: 156 MRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHAL-------------DLIRSKNFLLLMD 202
+ TG+ + ++ V+ +G MLL+L++G+ L L++ K L+D
Sbjct: 207 LSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVD 266
Query: 203 SALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
L+G++ ++E +L+++A C QS ERP +V
Sbjct: 267 VDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVV 303
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 82/148 (55%), Gaps = 11/148 (7%)
Query: 43 RSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE--TQPMKWAMRLRVALYLAQAL 100
R L +LIG C E +E +L+ ++M N L +HL+ + T M W RL + + A+ L
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 101 EYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRD-GKSY-----STNLAFTPP 153
Y + RA+ H D+ + IL D++ P+++ FG+ K + G+++ L + P
Sbjct: 153 HYLHT--RAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDP 210
Query: 154 EYMRTGRVTPESVVYSFGTMLLDLLSGK 181
EY GR+T +S VYSFG +L ++L +
Sbjct: 211 EYFIKGRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 78/148 (52%), Gaps = 11/148 (7%)
Query: 43 RSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE--TQPMKWAMRLRVALYLAQAL 100
R L +LIG C E +E +L+ ++M N L +HL+ + T M W RL + + A+ L
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 101 EYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRD------GKSYSTNLAFTPP 153
Y + RA+ H D+ + IL D++ P+++ FG+ K + L + P
Sbjct: 153 HYLHT--RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDP 210
Query: 154 EYMRTGRVTPESVVYSFGTMLLDLLSGK 181
EY GR+T +S VYSFG +L ++L +
Sbjct: 211 EYFIKGRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 28/226 (12%)
Query: 34 EEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE-TQPMKWAMRLRV 92
+E K + + E L L+G + D+ LV +MPN +L L + T P+ W MR ++
Sbjct: 79 QEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKI 138
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD------GKSYST 146
A A + + + ++ D+ + IL D+ ++S FGL + S
Sbjct: 139 AQGAANGINFLH-ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVG 197
Query: 147 NLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA-- 204
A+ PE +R G +TP+S +YSFG +LL++++G +P A+D R LL +
Sbjct: 198 TTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG--LP---AVDEHREPQLLLDIKEEIE 251
Query: 205 ---------LEGHFSNDEGTE---LVRLASRCLQSEARERPNAKSL 238
++ ++ + T + +AS+CL + +RP+ K +
Sbjct: 252 DEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 297
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 28/226 (12%)
Query: 34 EEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE-TQPMKWAMRLRV 92
+E K + + E L L+G + D+ LV +MPN +L L + T P+ W MR ++
Sbjct: 79 QEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKI 138
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD------GKSYST 146
A A + + + ++ D+ + IL D+ ++S FGL + S
Sbjct: 139 AQGAANGINFLH-ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVG 197
Query: 147 NLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA-- 204
A+ PE +R G +TP+S +YSFG +LL++++G +P A+D R LL +
Sbjct: 198 TTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG--LP---AVDEHREPQLLLDIKEEIE 251
Query: 205 ---------LEGHFSNDEGTE---LVRLASRCLQSEARERPNAKSL 238
++ ++ + T + +AS+CL + +RP+ K +
Sbjct: 252 DEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 297
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 28/226 (12%)
Query: 34 EEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE-TQPMKWAMRLRV 92
+E K + + E L L+G + D+ LV +MPN +L L + T P+ W MR ++
Sbjct: 73 QEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKI 132
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD------GKSYST 146
A A + + + ++ D+ + IL D+ ++S FGL + S
Sbjct: 133 AQGAANGINFLH-ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVG 191
Query: 147 NLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA-- 204
A+ PE +R G +TP+S +YSFG +LL++++G +P A+D R LL +
Sbjct: 192 TTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG--LP---AVDEHREPQLLLDIKEEIE 245
Query: 205 ---------LEGHFSNDEGTE---LVRLASRCLQSEARERPNAKSL 238
++ ++ + T + +AS+CL + +RP+ K +
Sbjct: 246 DEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 291
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 103/226 (45%), Gaps = 28/226 (12%)
Query: 34 EEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE-TQPMKWAMRLRV 92
+E K + E L L+G + D+ LV + PN +L L + T P+ W R ++
Sbjct: 70 QEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKI 129
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD------GKSYST 146
A A + + + ++ D+ + IL D+ ++S FGL + S
Sbjct: 130 AQGAANGINFLH-ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVG 188
Query: 147 NLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALE 206
A+ PE +R G +TP+S +YSFG +LL++++G +P A+D R LL + +E
Sbjct: 189 TTAYXAPEALR-GEITPKSDIYSFGVVLLEIITG--LP---AVDEHREPQLLLDIKEEIE 242
Query: 207 GHF----------SNDEGTELVR----LASRCLQSEARERPNAKSL 238
ND + V +AS+CL + +RP+ K +
Sbjct: 243 DEEKTIEDYIDKKXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKV 288
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 112/237 (47%), Gaps = 19/237 (8%)
Query: 21 VLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL---- 76
+++ + E +EEAK + NL E+L L G C + ++ E+M N L +L
Sbjct: 55 MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR 114
Query: 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136
++TQ + L + + +A+EY SK + L+ DL A L + G ++S FGL +
Sbjct: 115 HRFQTQQL-----LEMCKDVCEAMEYLESK-QFLHRDLAARNCLVNDQGVVKVSDFGLSR 168
Query: 137 NSRDGKSYST-----NLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDL 191
D + S+ + ++PPE + + + +S +++FG ++ ++ S +P +
Sbjct: 169 YVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS 228
Query: 192 IRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248
+++ + L + + ++ + C +A ERP K L+ +++ + E
Sbjct: 229 ETAEH----IAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 112/237 (47%), Gaps = 19/237 (8%)
Query: 21 VLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL---- 76
+++ + E +EEAK + NL E+L L G C + ++ E+M N L +L
Sbjct: 40 MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR 99
Query: 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136
++TQ + L + + +A+EY SK + L+ DL A L + G ++S FGL +
Sbjct: 100 HRFQTQQL-----LEMCKDVCEAMEYLESK-QFLHRDLAARNCLVNDQGVVKVSDFGLSR 153
Query: 137 NSRDGKSYST-----NLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDL 191
D + S+ + ++PPE + + + +S +++FG ++ ++ S +P +
Sbjct: 154 YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS 213
Query: 192 IRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248
+++ + L + + ++ + C +A ERP K L+ +++ + E
Sbjct: 214 ETAEH----IAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 266
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 112/237 (47%), Gaps = 19/237 (8%)
Query: 21 VLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL---- 76
+++ + E +EEAK + NL E+L L G C + ++ E+M N L +L
Sbjct: 46 MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR 105
Query: 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136
++TQ + L + + +A+EY SK + L+ DL A L + G ++S FGL +
Sbjct: 106 HRFQTQQL-----LEMCKDVCEAMEYLESK-QFLHRDLAARNCLVNDQGVVKVSDFGLSR 159
Query: 137 NSRDGKSYST-----NLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDL 191
D + S+ + ++PPE + + + +S +++FG ++ ++ S +P +
Sbjct: 160 YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS 219
Query: 192 IRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248
+++ + L + + ++ + C +A ERP K L+ +++ + E
Sbjct: 220 ETAEH----IAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 272
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 112/237 (47%), Gaps = 19/237 (8%)
Query: 21 VLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL---- 76
+++ + E +EEAK + NL E+L L G C + ++ E+M N L +L
Sbjct: 35 MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR 94
Query: 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136
++TQ + L + + +A+EY SK + L+ DL A L + G ++S FGL +
Sbjct: 95 HRFQTQQL-----LEMCKDVCEAMEYLESK-QFLHRDLAARNCLVNDQGVVKVSDFGLSR 148
Query: 137 NSRDGKSYST-----NLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDL 191
D + S+ + ++PPE + + + +S +++FG ++ ++ S +P +
Sbjct: 149 YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS 208
Query: 192 IRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248
+++ + L + + ++ + C +A ERP K L+ +++ + E
Sbjct: 209 ETAEH----IAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 261
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 112/237 (47%), Gaps = 19/237 (8%)
Query: 21 VLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL---- 76
+++ + E +EEAK + NL E+L L G C + ++ E+M N L +L
Sbjct: 39 MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR 98
Query: 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136
++TQ + L + + +A+EY SK + L+ DL A L + G ++S FGL +
Sbjct: 99 HRFQTQQL-----LEMCKDVCEAMEYLESK-QFLHRDLAARNCLVNDQGVVKVSDFGLSR 152
Query: 137 NSRDGKSYST-----NLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDL 191
D + S+ + ++PPE + + + +S +++FG ++ ++ S +P +
Sbjct: 153 YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS 212
Query: 192 IRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248
+++ + L + + ++ + C +A ERP K L+ +++ + E
Sbjct: 213 ETAEH----IAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 265
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 112/237 (47%), Gaps = 19/237 (8%)
Query: 21 VLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL---- 76
+++ + E +EEAK + NL E+L L G C + ++ E+M N L +L
Sbjct: 55 MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR 114
Query: 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136
++TQ + L + + +A+EY SK + L+ DL A L + G ++S FGL +
Sbjct: 115 HRFQTQQL-----LEMCKDVCEAMEYLESK-QFLHRDLAARNCLVNDQGVVKVSDFGLSR 168
Query: 137 NSRDGKSYST-----NLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDL 191
D + S+ + ++PPE + + + +S +++FG ++ ++ S +P +
Sbjct: 169 YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS 228
Query: 192 IRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248
+++ + L + + ++ + C +A ERP K L+ +++ + E
Sbjct: 229 ETAEH----IAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 111/234 (47%), Gaps = 19/234 (8%)
Query: 21 VLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL---- 76
+++ + E +EEAK + NL E+L L G C + ++ E+M N L +L
Sbjct: 40 MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR 99
Query: 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136
++TQ + L + + +A+EY SK + L+ DL A L + G ++S FGL +
Sbjct: 100 HRFQTQQL-----LEMCKDVCEAMEYLESK-QFLHRDLAARNCLVNDQGVVKVSDFGLSR 153
Query: 137 NSRDGKSYSTN-----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDL 191
D + S+ + ++PPE + + + +S +++FG ++ ++ S +P +
Sbjct: 154 YVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS 213
Query: 192 IRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245
+++ + L + + ++ + C +A ERP K L+ +++ +
Sbjct: 214 ETAEH----IAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDV 263
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 3/154 (1%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLR 91
L EA + LR L L+G E L +V E+M +L +L + L+
Sbjct: 62 LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK 121
Query: 92 VALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST-NLAF 150
+L + +A+EY ++ DL A +L +D ++S FGL K + + + +
Sbjct: 122 FSLDVCEAMEYLEGN-NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKW 180
Query: 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
T PE +R + + +S V+SFG +L ++ S +P
Sbjct: 181 TAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 214
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 3/154 (1%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLR 91
L EA + LR L L+G E L +V E+M +L +L + L+
Sbjct: 47 LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK 106
Query: 92 VALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST-NLAF 150
+L + +A+EY ++ DL A +L +D ++S FGL K + + + +
Sbjct: 107 FSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKW 165
Query: 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
T PE +R + + +S V+SFG +L ++ S +P
Sbjct: 166 TAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 199
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 3/154 (1%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLR 91
L EA + LR L L+G E L +V E+M +L +L + L+
Sbjct: 234 LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK 293
Query: 92 VALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST-NLAF 150
+L + +A+EY ++ DL A +L +D ++S FGL K + + + +
Sbjct: 294 FSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKW 352
Query: 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
T PE +R + + +S V+SFG +L ++ S +P
Sbjct: 353 TAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 386
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 111/237 (46%), Gaps = 17/237 (7%)
Query: 13 FHCHLKSSVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEAD-ERLLVAEFMPNE 70
HC +KS + +D+GE L E + + + +L+G C ++ L+V +M +
Sbjct: 77 IHCAVKS-LNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHG 135
Query: 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130
L ++ ET + L +A+ ++Y +SK + ++ DL A + D+ +++
Sbjct: 136 DL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVA 193
Query: 131 SFGLMKNSRDGKSYSTN--------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKH 182
FGL ++ D + YS + + + E ++T + T +S V+SFG +L +L++ +
Sbjct: 194 DFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RG 252
Query: 183 IPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
PP ++ +LL L+ + D L + +C +A RP+ LV
Sbjct: 253 APPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKAEMRPSFSELV 306
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 111/237 (46%), Gaps = 17/237 (7%)
Query: 13 FHCHLKSSVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEAD-ERLLVAEFMPNE 70
HC +KS + +D+GE L E + + + +L+G C ++ L+V +M +
Sbjct: 51 IHCAVKS-LNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHG 109
Query: 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130
L ++ ET + L +A+ ++Y +SK + ++ DL A + D+ +++
Sbjct: 110 DL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVA 167
Query: 131 SFGLMKNSRDGKSYSTN--------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKH 182
FGL ++ D + YS + + + E ++T + T +S V+SFG +L +L++ +
Sbjct: 168 DFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RG 226
Query: 183 IPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
PP ++ +LL L+ + D L + +C +A RP+ LV
Sbjct: 227 APPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKAEMRPSFSELV 280
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 111/237 (46%), Gaps = 17/237 (7%)
Query: 13 FHCHLKSSVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEAD-ERLLVAEFMPNE 70
HC +KS + +D+GE L E + + + +L+G C ++ L+V +M +
Sbjct: 59 IHCAVKS-LNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHG 117
Query: 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130
L ++ ET + L +A+ ++Y +SK + ++ DL A + D+ +++
Sbjct: 118 DL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVA 175
Query: 131 SFGLMKNSRDGKSYSTN--------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKH 182
FGL ++ D + YS + + + E ++T + T +S V+SFG +L +L++ +
Sbjct: 176 DFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RG 234
Query: 183 IPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
PP ++ +LL L+ + D L + +C +A RP+ LV
Sbjct: 235 APPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKAEMRPSFSELV 288
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 3/154 (1%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLR 91
L EA + LR L L+G E L +V E+M +L +L + L+
Sbjct: 53 LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK 112
Query: 92 VALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST-NLAF 150
+L + +A+EY ++ DL A +L +D ++S FGL K + + + +
Sbjct: 113 FSLDVCEAMEYLEGN-NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKW 171
Query: 151 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
T PE +R + +S V+SFG +L ++ S +P
Sbjct: 172 TAPEALREAAFSTKSDVWSFGILLWEIYSFGRVP 205
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 111/237 (46%), Gaps = 17/237 (7%)
Query: 13 FHCHLKSSVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEAD-ERLLVAEFMPNE 70
HC +KS + +D+GE L E + + + +L+G C ++ L+V +M +
Sbjct: 57 IHCAVKS-LNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHG 115
Query: 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130
L ++ ET + L +A+ ++Y +SK + ++ DL A + D+ +++
Sbjct: 116 DL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVA 173
Query: 131 SFGLMKNSRDGKSYSTN--------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKH 182
FGL ++ D + YS + + + E ++T + T +S V+SFG +L +L++ +
Sbjct: 174 DFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RG 232
Query: 183 IPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
PP ++ +LL L+ + D L + +C +A RP+ LV
Sbjct: 233 APPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKAEMRPSFSELV 286
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 111/237 (46%), Gaps = 17/237 (7%)
Query: 13 FHCHLKSSVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEAD-ERLLVAEFMPNE 70
HC +KS + +D+GE L E + + + +L+G C ++ L+V +M +
Sbjct: 58 IHCAVKS-LNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHG 116
Query: 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130
L ++ ET + L +A+ ++Y +SK + ++ DL A + D+ +++
Sbjct: 117 DL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVA 174
Query: 131 SFGLMKNSRDGKSYSTN--------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKH 182
FGL ++ D + YS + + + E ++T + T +S V+SFG +L +L++ +
Sbjct: 175 DFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RG 233
Query: 183 IPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
PP ++ +LL L+ + D L + +C +A RP+ LV
Sbjct: 234 APPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKAEMRPSFSELV 287
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 111/237 (46%), Gaps = 17/237 (7%)
Query: 13 FHCHLKSSVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEAD-ERLLVAEFMPNE 70
HC +KS + +D+GE L E + + + +L+G C ++ L+V +M +
Sbjct: 56 IHCAVKS-LNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHG 114
Query: 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130
L ++ ET + L +A+ ++Y +SK + ++ DL A + D+ +++
Sbjct: 115 DL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVA 172
Query: 131 SFGLMKNSRDGKSYSTN--------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKH 182
FGL ++ D + YS + + + E ++T + T +S V+SFG +L +L++ +
Sbjct: 173 DFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RG 231
Query: 183 IPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
PP ++ +LL L+ + D L + +C +A RP+ LV
Sbjct: 232 APPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKAEMRPSFSELV 285
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 111/237 (46%), Gaps = 17/237 (7%)
Query: 13 FHCHLKSSVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEAD-ERLLVAEFMPNE 70
HC +KS + +D+GE L E + + + +L+G C ++ L+V +M +
Sbjct: 78 IHCAVKS-LNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHG 136
Query: 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130
L ++ ET + L +A+ ++Y +SK + ++ DL A + D+ +++
Sbjct: 137 DL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVA 194
Query: 131 SFGLMKNSRDGKSYSTN--------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKH 182
FGL ++ D + YS + + + E ++T + T +S V+SFG +L +L++ +
Sbjct: 195 DFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RG 253
Query: 183 IPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
PP ++ +LL L+ + D L + +C +A RP+ LV
Sbjct: 254 APPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKAEMRPSFSELV 307
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 111/237 (46%), Gaps = 17/237 (7%)
Query: 13 FHCHLKSSVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEAD-ERLLVAEFMPNE 70
HC +KS + +D+GE L E + + + +L+G C ++ L+V +M +
Sbjct: 59 IHCAVKS-LNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHG 117
Query: 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130
L ++ ET + L +A+ ++Y +SK + ++ DL A + D+ +++
Sbjct: 118 DL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVA 175
Query: 131 SFGLMKNSRDGKSYSTN--------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKH 182
FGL ++ D + YS + + + E ++T + T +S V+SFG +L +L++ +
Sbjct: 176 DFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RG 234
Query: 183 IPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
PP ++ +LL L+ + D L + +C +A RP+ LV
Sbjct: 235 APPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKAEMRPSFSELV 288
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 111/237 (46%), Gaps = 17/237 (7%)
Query: 13 FHCHLKSSVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEAD-ERLLVAEFMPNE 70
HC +KS + +D+GE L E + + + +L+G C ++ L+V +M +
Sbjct: 54 IHCAVKS-LNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHG 112
Query: 71 TLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130
L ++ ET + L +A+ ++Y +SK + ++ DL A + D+ +++
Sbjct: 113 DL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVA 170
Query: 131 SFGLMKNSRDGKSYSTN--------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKH 182
FGL ++ D + YS + + + E ++T + T +S V+SFG +L +L++ +
Sbjct: 171 DFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RG 229
Query: 183 IPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
PP ++ +LL L+ + D L + +C +A RP+ LV
Sbjct: 230 APPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKAEMRPSFSELV 283
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 103/234 (44%), Gaps = 23/234 (9%)
Query: 34 EEAKAVGNLRSERLANLIGCCYEADER--LLVAEFMPNETLAKHLFHWETQPMKWAMRLR 91
+E + L E + GCC + E+ LV E++P +L +L + A L
Sbjct: 65 QEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHSIGLAQLLL 121
Query: 92 VALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY------- 144
A + + + Y S+ ++ +L A +L D D ++ FGL K +G Y
Sbjct: 122 FAQQICEGMAYLHSQ-HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDG 180
Query: 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS---GKHIPPSHALDLI---RSKNFL 198
+ + + PE ++ + S V+SFG L +LL+ PP+ L+LI + + +
Sbjct: 181 DSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTV 240
Query: 199 LLMDSALEGH----FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248
L + LE + E+ L C ++EA RP ++L+ L ++ ++
Sbjct: 241 LRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHEK 294
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 103/234 (44%), Gaps = 23/234 (9%)
Query: 34 EEAKAVGNLRSERLANLIGCCYEADER--LLVAEFMPNETLAKHLFHWETQPMKWAMRLR 91
+E + L E + GCC + E+ LV E++P +L +L + A L
Sbjct: 65 QEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHSIGLAQLLL 121
Query: 92 VALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY------- 144
A + + + Y ++ ++ +L A +L D D ++ FGL K +G Y
Sbjct: 122 FAQQICEGMAYLHAQ-HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDG 180
Query: 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS---GKHIPPSHALDLI---RSKNFL 198
+ + + PE ++ + S V+SFG L +LL+ PP+ L+LI + + +
Sbjct: 181 DSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTV 240
Query: 199 LLMDSALEGH----FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248
L + LE + E+ L C ++EA RP ++L+ L ++ ++
Sbjct: 241 LRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHEK 294
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 107/226 (47%), Gaps = 23/226 (10%)
Query: 39 VGNLRSERLAN-LIGCCYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMR--LRVAL 94
VG LR R N L+ Y +L +V ++ +L HL ET K+ M+ + +A
Sbjct: 71 VGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASET---KFEMKKLIDIAR 127
Query: 95 YLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL-MKNSRDGKSY-----STNL 148
A+ ++Y +K ++ DL + I +D ++ FGL + SR S+ S ++
Sbjct: 128 QTARGMDYLHAKS-IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSI 186
Query: 149 AFTPPEYMRTGRVTP---ESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL 205
+ PE +R P +S VY+FG +L +L++G+ +P S+ + R + ++ +L
Sbjct: 187 LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ-LPYSNINN--RDQIIEMVGRGSL 243
Query: 206 EGHFSNDEGT---ELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248
S + RL + CL+ + ERP+ ++ + L +E
Sbjct: 244 SPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELARE 289
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 104/226 (46%), Gaps = 23/226 (10%)
Query: 39 VGNLRSERLAN-LIGCCYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMR--LRVAL 94
VG LR R N L+ Y +L +V ++ +L HL ET K+ M+ + +A
Sbjct: 59 VGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASET---KFEMKKLIDIAR 115
Query: 95 YLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL------MKNSRDGKSYSTNL 148
A+ ++Y +K ++ DL + I +D ++ FGL S + S ++
Sbjct: 116 QTARGMDYLHAKS-IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSI 174
Query: 149 AFTPPEYMRTGRVTP---ESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL 205
+ PE +R P +S VY+FG +L +L++G+ +P S+ + R + ++ +L
Sbjct: 175 LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ-LPYSNINN--RDQIIEMVGRGSL 231
Query: 206 EGHFSNDEGT---ELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248
S + RL + CL+ + ERP+ ++ + L +E
Sbjct: 232 SPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELARE 277
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 114/261 (43%), Gaps = 21/261 (8%)
Query: 3 GRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLL 62
G K+S+ LK +E + L+EA + ++ L L+G C +
Sbjct: 34 GVWKKYSLTVAVKTLKEDTMEVEEF-----LKEAAVMKEIKHPNLVQLLGVCTREPPFYI 88
Query: 63 VAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD 122
+ EFM L +L Q + + L +A ++ A+EY K ++ DL A L
Sbjct: 89 ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVG 147
Query: 123 KDGNPRLSSFGLMKNSRDGKSYSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLD 176
++ +++ FGL + G +Y+ + + +T PE + + + +S V++FG +L +
Sbjct: 148 ENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 206
Query: 177 LLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEG--TELVRLASRCLQSEARERPN 234
+ + + P +DL + LL D +E EG ++ L C Q +RP+
Sbjct: 207 IAT-YGMSPYPGIDLSQVYE-LLEKDYRME----RPEGCPEKVYELMRACWQWNPSDRPS 260
Query: 235 AKSLVISLMSLQKEAEVPSYV 255
+ + ++ +E+ + V
Sbjct: 261 FAEIHQAFETMFQESSISDEV 281
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 107/226 (47%), Gaps = 23/226 (10%)
Query: 39 VGNLRSERLAN-LIGCCYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMR--LRVAL 94
VG LR R N L+ Y +L +V ++ +L HL ET K+ M+ + +A
Sbjct: 71 VGVLRKTRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHASET---KFEMKKLIDIAR 127
Query: 95 YLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL-MKNSRDGKSY-----STNL 148
A+ ++Y +K ++ DL + I +D ++ FGL + SR S+ S ++
Sbjct: 128 QTARGMDYLHAKS-IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSI 186
Query: 149 AFTPPEYMRTGRVTP---ESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL 205
+ PE +R P +S VY+FG +L +L++G+ +P S+ + R + ++ +L
Sbjct: 187 LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ-LPYSNINN--RDQIIEMVGRGSL 243
Query: 206 EGHFSNDEGT---ELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248
S + RL + CL+ + ERP+ ++ + L +E
Sbjct: 244 SPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELARE 289
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 114/261 (43%), Gaps = 21/261 (8%)
Query: 3 GRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLL 62
G K+S+ LK +E + L+EA + ++ L L+G C +
Sbjct: 34 GVWKKYSLTVAVKTLKEDTMEVEEF-----LKEAAVMKEIKHPNLVQLLGVCTREPPFYI 88
Query: 63 VAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD 122
+ EFM L +L Q + + L +A ++ A+EY K ++ DL A L
Sbjct: 89 ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVG 147
Query: 123 KDGNPRLSSFGLMKNSRDGKSYSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLD 176
++ +++ FGL + G +Y+ + + +T PE + + + +S V++FG +L +
Sbjct: 148 ENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 206
Query: 177 LLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEG--TELVRLASRCLQSEARERPN 234
+ + + P +DL + LL D +E EG ++ L C Q +RP+
Sbjct: 207 IAT-YGMSPYPGIDLSQVYE-LLEKDYRME----RPEGCPEKVYELMRACWQWNPSDRPS 260
Query: 235 AKSLVISLMSLQKEAEVPSYV 255
+ + ++ +E+ + V
Sbjct: 261 FAEIHQAFETMFQESSISDEV 281
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 113/257 (43%), Gaps = 21/257 (8%)
Query: 3 GRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLL 62
G K+S+ LK +E + L+EA + ++ L L+G C +
Sbjct: 37 GVWKKYSLTVAVKTLKEDTMEVEEF-----LKEAAVMKEIKHPNLVQLLGVCTREPPFYI 91
Query: 63 VAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD 122
+ EFM L +L Q + + L +A ++ A+EY K ++ DL A L
Sbjct: 92 ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVG 150
Query: 123 KDGNPRLSSFGLMKNSRDGKSYSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLD 176
++ +++ FGL + G +Y+ + + +T PE + + + +S V++FG +L +
Sbjct: 151 ENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 209
Query: 177 LLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEG--TELVRLASRCLQSEARERPN 234
+ + + P +DL + LL D +E EG ++ L C Q +RP+
Sbjct: 210 IAT-YGMSPYPGIDLSQVYE-LLEKDYRME----RPEGCPEKVYELMRACWQWNPSDRPS 263
Query: 235 AKSLVISLMSLQKEAEV 251
+ + ++ +E+ +
Sbjct: 264 FAEIHQAFETMFQESSI 280
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 113/257 (43%), Gaps = 21/257 (8%)
Query: 3 GRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLL 62
G K+S+ LK +E + L+EA + ++ L L+G C +
Sbjct: 45 GVWKKYSLTVAVKTLKEDTMEVEEF-----LKEAAVMKEIKHPNLVQLLGVCTREPPFYI 99
Query: 63 VAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD 122
+ EFM L +L Q + + L +A ++ A+EY K ++ DL A L
Sbjct: 100 ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVG 158
Query: 123 KDGNPRLSSFGLMKNSRDGKSYSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLD 176
++ +++ FGL + G +Y+ + + +T PE + + + +S V++FG +L +
Sbjct: 159 ENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 217
Query: 177 LLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEG--TELVRLASRCLQSEARERPN 234
+ + + P +DL + LL D +E EG ++ L C Q +RP+
Sbjct: 218 IAT-YGMSPYPGIDLSQVYE-LLEKDYRME----RPEGCPEKVYELMRACWQWNPSDRPS 271
Query: 235 AKSLVISLMSLQKEAEV 251
+ + ++ +E+ +
Sbjct: 272 FAEIHQAFETMFQESSI 288
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 102/222 (45%), Gaps = 27/222 (12%)
Query: 39 VGNLRSERLAN-LIGCCYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYL 96
VG LR R N L+ Y +L +V ++ +L HL ET+ + + +A
Sbjct: 55 VGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQT 113
Query: 97 AQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL------MKNSRDGKSYSTNLAF 150
AQ ++Y +K ++ DL + I +D ++ FGL S + S ++ +
Sbjct: 114 AQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 172
Query: 151 TPPEYMRTGRVTP---ESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEG 207
PE +R P +S VY+FG +L +L++G+ +P S+ I +++ ++ M G
Sbjct: 173 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ-LPYSN----INNRDQIIFMVG--RG 225
Query: 208 HFSNDEG-------TELVRLASRCLQSEARERPNAKSLVISL 242
+ S D + RL + CL+ + ERP ++ S+
Sbjct: 226 YLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 267
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 113/257 (43%), Gaps = 21/257 (8%)
Query: 3 GRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLL 62
G K+S+ LK +E + L+EA + ++ L L+G C +
Sbjct: 32 GVWKKYSLTVAVKTLKEDTMEVEEF-----LKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 63 VAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD 122
+ EFM L +L Q + + L +A ++ A+EY K ++ DL A L
Sbjct: 87 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVG 145
Query: 123 KDGNPRLSSFGLMKNSRDGKSYSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLD 176
++ +++ FGL + G +Y+ + + +T PE + + + +S V++FG +L +
Sbjct: 146 ENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 204
Query: 177 LLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEG--TELVRLASRCLQSEARERPN 234
+ + + P +DL + LL D +E EG ++ L C Q +RP+
Sbjct: 205 IAT-YGMSPYPGIDLSQVYE-LLEKDYRME----RPEGCPEKVYELMRACWQWNPSDRPS 258
Query: 235 AKSLVISLMSLQKEAEV 251
+ + ++ +E+ +
Sbjct: 259 FAEIHQAFETMFQESSI 275
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 105/222 (47%), Gaps = 27/222 (12%)
Query: 39 VGNLRSERLAN-LIGCCYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYL 96
VG LR R N L+ Y +L +V ++ +L HL ET+ + + +A
Sbjct: 55 VGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQT 113
Query: 97 AQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL-MKNSRDGKSY-----STNLAF 150
AQ ++Y +K ++ DL + I +D ++ FGL + SR S+ S ++ +
Sbjct: 114 AQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILW 172
Query: 151 TPPEYMRTGRVTP---ESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEG 207
PE +R P +S VY+FG +L +L++G+ +P S+ I +++ ++ M G
Sbjct: 173 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ-LPYSN----INNRDQIIFMVG--RG 225
Query: 208 HFSNDEG-------TELVRLASRCLQSEARERPNAKSLVISL 242
+ S D + RL + CL+ + ERP ++ S+
Sbjct: 226 YLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 267
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 113/257 (43%), Gaps = 21/257 (8%)
Query: 3 GRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLL 62
G K+S+ LK +E + L+EA + ++ L L+G C +
Sbjct: 37 GVWKKYSLTVAVKTLKEDTMEVEEF-----LKEAAVMKEIKHPNLVQLLGVCTREPPFYI 91
Query: 63 VAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD 122
+ EFM L +L Q + + L +A ++ A+EY K ++ DL A L
Sbjct: 92 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVG 150
Query: 123 KDGNPRLSSFGLMKNSRDGKSYSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLD 176
++ +++ FGL + G +Y+ + + +T PE + + + +S V++FG +L +
Sbjct: 151 ENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 209
Query: 177 LLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEG--TELVRLASRCLQSEARERPN 234
+ + + P +DL + LL D +E EG ++ L C Q +RP+
Sbjct: 210 IAT-YGMSPYPGIDLSQVYE-LLEKDYRME----RPEGCPEKVYELMRACWQWNPSDRPS 263
Query: 235 AKSLVISLMSLQKEAEV 251
+ + ++ +E+ +
Sbjct: 264 FAEIHQAFETMFQESSI 280
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 98/213 (46%), Gaps = 27/213 (12%)
Query: 39 VGNLRSERLAN-LIGCCYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYL 96
VG LR R N L+ Y +L +V ++ +L HL ET+ + + +A
Sbjct: 60 VGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQT 118
Query: 97 AQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL------MKNSRDGKSYSTNLAF 150
AQ ++Y +K ++ DL + I +D ++ FGL S + S ++ +
Sbjct: 119 AQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 177
Query: 151 TPPEYMRTGRVTP---ESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEG 207
PE +R P +S VY+FG +L +L++G+ +P S+ I +++ ++ M G
Sbjct: 178 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ-LPYSN----INNRDQIIFMVG--RG 230
Query: 208 HFSNDEG-------TELVRLASRCLQSEARERP 233
+ S D + RL + CL+ + ERP
Sbjct: 231 YLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 263
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 113/257 (43%), Gaps = 21/257 (8%)
Query: 3 GRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLL 62
G K+S+ LK +E + L+EA + ++ L L+G C +
Sbjct: 32 GVWKKYSLTVAVKTLKEDTMEVEEF-----LKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 63 VAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD 122
+ EFM L +L Q + + L +A ++ A+EY K ++ DL A L
Sbjct: 87 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVG 145
Query: 123 KDGNPRLSSFGLMKNSRDGKSYSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLD 176
++ +++ FGL + G +Y+ + + +T PE + + + +S V++FG +L +
Sbjct: 146 ENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 204
Query: 177 LLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEG--TELVRLASRCLQSEARERPN 234
+ + + P +DL + LL D +E EG ++ L C Q +RP+
Sbjct: 205 IAT-YGMSPYPGIDLSQVYE-LLEKDYRME----RPEGCPEKVYELMRACWQWNPSDRPS 258
Query: 235 AKSLVISLMSLQKEAEV 251
+ + ++ +E+ +
Sbjct: 259 FAEIHQAFETMFQESSI 275
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 98/213 (46%), Gaps = 27/213 (12%)
Query: 39 VGNLRSERLAN-LIGCCYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYL 96
VG LR R N L+ Y +L +V ++ +L HL ET+ + + +A
Sbjct: 57 VGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQT 115
Query: 97 AQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL------MKNSRDGKSYSTNLAF 150
AQ ++Y +K ++ DL + I +D ++ FGL S + S ++ +
Sbjct: 116 AQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 174
Query: 151 TPPEYMRTGRVTP---ESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEG 207
PE +R P +S VY+FG +L +L++G+ +P S+ I +++ ++ M G
Sbjct: 175 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ-LPYSN----INNRDQIIFMVG--RG 227
Query: 208 HFSNDEG-------TELVRLASRCLQSEARERP 233
+ S D + RL + CL+ + ERP
Sbjct: 228 YLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 260
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 98/213 (46%), Gaps = 27/213 (12%)
Query: 39 VGNLRSERLAN-LIGCCYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYL 96
VG LR R N L+ Y +L +V ++ +L HL ET+ + + +A
Sbjct: 60 VGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQT 118
Query: 97 AQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL------MKNSRDGKSYSTNLAF 150
AQ ++Y +K ++ DL + I +D ++ FGL S + S ++ +
Sbjct: 119 AQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 177
Query: 151 TPPEYMRTGRVTP---ESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEG 207
PE +R P +S VY+FG +L +L++G+ +P S+ I +++ ++ M G
Sbjct: 178 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ-LPYSN----INNRDQIIFMVG--RG 230
Query: 208 HFSNDEG-------TELVRLASRCLQSEARERP 233
+ S D + RL + CL+ + ERP
Sbjct: 231 YLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 263
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 113/257 (43%), Gaps = 21/257 (8%)
Query: 3 GRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLL 62
G K+S+ LK +E + L+EA + ++ L L+G C +
Sbjct: 32 GVWKKYSLTVAVKTLKEDTMEVEEF-----LKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 63 VAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD 122
+ EFM L +L Q + + L +A ++ A+EY K ++ DL A L
Sbjct: 87 IIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVG 145
Query: 123 KDGNPRLSSFGLMKNSRDGKSYSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLD 176
++ +++ FGL + G +Y+ + + +T PE + + + +S V++FG +L +
Sbjct: 146 ENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 204
Query: 177 LLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEG--TELVRLASRCLQSEARERPN 234
+ + + P +DL + LL D +E EG ++ L C Q +RP+
Sbjct: 205 IAT-YGMSPYPGIDLSQVYE-LLEKDYRME----RPEGCPEKVYELMRACWQWNPSDRPS 258
Query: 235 AKSLVISLMSLQKEAEV 251
+ + ++ +E+ +
Sbjct: 259 FAEIHQAFETMFQESSI 275
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 101/213 (47%), Gaps = 27/213 (12%)
Query: 39 VGNLRSERLAN-LIGCCYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYL 96
VG LR R N L+ Y +L +V ++ +L HL ET+ + + +A
Sbjct: 75 VGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQT 133
Query: 97 AQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL-MKNSRDGKSY-----STNLAF 150
AQ ++Y +K ++ DL + I +D ++ FGL + SR S+ S ++ +
Sbjct: 134 AQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILW 192
Query: 151 TPPEYMRTGRVTP---ESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEG 207
PE +R P +S VY+FG +L +L++G+ +P S+ I +++ ++ M G
Sbjct: 193 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ-LPYSN----INNRDQIIFMVG--RG 245
Query: 208 HFSNDEG-------TELVRLASRCLQSEARERP 233
+ S D + RL + CL+ + ERP
Sbjct: 246 YLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 278
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 100/238 (42%), Gaps = 30/238 (12%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL--------FHWETQP--- 83
EA+ + NL+ E + G C E D ++V E+M + L K L E P
Sbjct: 65 EAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTE 124
Query: 84 MKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS 143
+ + L +A +A + Y +S+ ++ DL L ++ ++ FG+ ++
Sbjct: 125 LTQSQMLHIAQQIAAGMVYLASQ-HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDY 183
Query: 144 YSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKN 196
Y + + PPE + + T ES V+S G +L ++ + GK P + L S N
Sbjct: 184 YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQ--PWYQL----SNN 237
Query: 197 FLLLMDSALEGHFSNDEGT---ELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEV 251
++ + +G T E+ L C Q E R N K + L +L K + V
Sbjct: 238 EVI--ECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKASPV 293
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 101/213 (47%), Gaps = 27/213 (12%)
Query: 39 VGNLRSERLAN-LIGCCYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYL 96
VG LR R N L+ Y +L +V ++ +L HL ET+ + + +A
Sbjct: 83 VGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQT 141
Query: 97 AQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL-MKNSRDGKSY-----STNLAF 150
AQ ++Y +K ++ DL + I +D ++ FGL + SR S+ S ++ +
Sbjct: 142 AQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILW 200
Query: 151 TPPEYMRTGRVTP---ESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEG 207
PE +R P +S VY+FG +L +L++G+ +P S+ I +++ ++ M G
Sbjct: 201 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ-LPYSN----INNRDQIIFMVG--RG 253
Query: 208 HFSNDEG-------TELVRLASRCLQSEARERP 233
+ S D + RL + CL+ + ERP
Sbjct: 254 YLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 286
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 98/213 (46%), Gaps = 27/213 (12%)
Query: 39 VGNLRSERLAN-LIGCCYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYL 96
VG LR R N L+ Y +L +V ++ +L HL ET+ + + +A
Sbjct: 83 VGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQT 141
Query: 97 AQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL------MKNSRDGKSYSTNLAF 150
AQ ++Y +K ++ DL + I +D ++ FGL S + S ++ +
Sbjct: 142 AQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 200
Query: 151 TPPEYMRTGRVTP---ESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEG 207
PE +R P +S VY+FG +L +L++G+ +P S+ I +++ ++ M G
Sbjct: 201 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ-LPYSN----INNRDQIIFMVG--RG 253
Query: 208 HFSNDEG-------TELVRLASRCLQSEARERP 233
+ S D + RL + CL+ + ERP
Sbjct: 254 YLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 286
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 98/213 (46%), Gaps = 27/213 (12%)
Query: 39 VGNLRSERLAN-LIGCCYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYL 96
VG LR R N L+ Y +L +V ++ +L HL ET+ + + +A
Sbjct: 82 VGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQT 140
Query: 97 AQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL------MKNSRDGKSYSTNLAF 150
AQ ++Y +K ++ DL + I +D ++ FGL S + S ++ +
Sbjct: 141 AQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 199
Query: 151 TPPEYMRTGRVTP---ESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEG 207
PE +R P +S VY+FG +L +L++G+ +P S+ I +++ ++ M G
Sbjct: 200 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ-LPYSN----INNRDQIIFMVG--RG 252
Query: 208 HFSNDEG-------TELVRLASRCLQSEARERP 233
+ S D + RL + CL+ + ERP
Sbjct: 253 YLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 285
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 113/257 (43%), Gaps = 21/257 (8%)
Query: 3 GRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLL 62
G K+S+ LK +E + L+EA + ++ L L+G C +
Sbjct: 32 GVWKKYSLTVAVKTLKEDTMEVEEF-----LKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 63 VAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD 122
+ EFM L +L Q + + L +A ++ A+EY K ++ DL A L
Sbjct: 87 IIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVG 145
Query: 123 KDGNPRLSSFGLMKNSRDGKSYSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLD 176
++ +++ FGL + G +Y+ + + +T PE + + + +S V++FG +L +
Sbjct: 146 ENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 204
Query: 177 LLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEG--TELVRLASRCLQSEARERPN 234
+ + + P +DL + LL D +E EG ++ L C Q +RP+
Sbjct: 205 IAT-YGMSPYPGIDLSQVYE-LLEKDYRME----RPEGCPEKVYELMRACWQWNPSDRPS 258
Query: 235 AKSLVISLMSLQKEAEV 251
+ + ++ +E+ +
Sbjct: 259 FAEIHQAFETMFQESSI 275
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 102/222 (45%), Gaps = 27/222 (12%)
Query: 39 VGNLRSERLAN-LIGCCYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYL 96
VG LR R N L+ Y +L +V ++ +L HL ET+ + + +A
Sbjct: 55 VGVLRKTRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQT 113
Query: 97 AQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL------MKNSRDGKSYSTNLAF 150
AQ ++Y +K ++ DL + I +D ++ FGL S + S ++ +
Sbjct: 114 AQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 172
Query: 151 TPPEYMRTGRVTP---ESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEG 207
PE +R P +S VY+FG +L +L++G+ +P S+ I +++ ++ M G
Sbjct: 173 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ-LPYSN----INNRDQIIFMVG--RG 225
Query: 208 HFSNDEG-------TELVRLASRCLQSEARERPNAKSLVISL 242
+ S D + RL + CL+ + ERP ++ S+
Sbjct: 226 YLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 267
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 11/159 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMR--L 90
+EEA+ + L +L L G C E LV EFM + L+ +L TQ +A L
Sbjct: 50 IEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL---RTQRGLFAAETLL 106
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN--- 147
+ L + + + Y + ++ DL A L ++ ++S FG+ + D + S+
Sbjct: 107 GMCLDVCEGMAYL-EEASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK 165
Query: 148 --LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ + PE R + +S V+SFG ++ ++ S IP
Sbjct: 166 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP 204
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 105/240 (43%), Gaps = 21/240 (8%)
Query: 3 GRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLL 62
G K+S+ LK +E + L+EA + ++ L L+G C +
Sbjct: 37 GVWKKYSLTVAVKTLKEDTMEVEEF-----LKEAAVMKEIKHPNLVQLLGVCTREPPFYI 91
Query: 63 VAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD 122
+ EFM L +L Q + + L +A ++ A+EY K ++ DL A L
Sbjct: 92 ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVG 150
Query: 123 KDGNPRLSSFGLMKNSRDGKSYSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLD 176
++ +++ FGL + G +Y+ + + +T PE + + + +S V++FG +L +
Sbjct: 151 ENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 209
Query: 177 LLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEG--TELVRLASRCLQSEARERPN 234
+ + + P +DL + LL D +E EG ++ L C Q +RP+
Sbjct: 210 IAT-YGMSPYPGIDLSQVYE-LLEKDYRME----RPEGCPEKVYELMRACWQWNPSDRPS 263
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 105/240 (43%), Gaps = 21/240 (8%)
Query: 3 GRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLL 62
G K+S+ LK +E + L+EA + ++ L L+G C +
Sbjct: 36 GVWKKYSLTVAVKTLKEDTMEVEEF-----LKEAAVMKEIKHPNLVQLLGVCTREPPFYI 90
Query: 63 VAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD 122
+ EFM L +L Q + + L +A ++ A+EY K ++ DL A L
Sbjct: 91 ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVG 149
Query: 123 KDGNPRLSSFGLMKNSRDGKSYSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLD 176
++ +++ FGL + G +Y+ + + +T PE + + + +S V++FG +L +
Sbjct: 150 ENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 208
Query: 177 LLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEG--TELVRLASRCLQSEARERPN 234
+ + + P +DL + LL D +E EG ++ L C Q +RP+
Sbjct: 209 IAT-YGMSPYPGIDLSQVYE-LLEKDYRME----RPEGCPEKVYELMRACWQWNPSDRPS 262
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 105/240 (43%), Gaps = 21/240 (8%)
Query: 3 GRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLL 62
G K+S+ LK +E + L+EA + ++ L L+G C +
Sbjct: 32 GVWKKYSLTVAVKTLKEDTMEVEEF-----LKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 63 VAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD 122
+ EFM L +L Q + + L +A ++ A+EY K ++ DL A L
Sbjct: 87 ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVG 145
Query: 123 KDGNPRLSSFGLMKNSRDGKSYSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLD 176
++ +++ FGL + G +Y+ + + +T PE + + + +S V++FG +L +
Sbjct: 146 ENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 204
Query: 177 LLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEG--TELVRLASRCLQSEARERPN 234
++ + P +DL + LL D +E EG ++ L C Q +RP+
Sbjct: 205 -IATYGMSPYPGIDLSQVYE-LLEKDYRME----RPEGCPEKVYELMRACWQWNPSDRPS 258
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 112/257 (43%), Gaps = 21/257 (8%)
Query: 3 GRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLL 62
G K+S+ LK +E + L+EA + ++ L L+G C +
Sbjct: 33 GVWKKYSLTVAVKTLKEDTMEVEEF-----LKEAAVMKEIKHPNLVQLLGVCTREPPFYI 87
Query: 63 VAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD 122
+ EFM L +L Q + + L +A ++ A+EY K ++ DL A L
Sbjct: 88 ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVG 146
Query: 123 KDGNPRLSSFGLMKNSRDGKSYST------NLAFTPPEYMRTGRVTPESVVYSFGTMLLD 176
++ +++ FGL + G +Y+ + +T PE + + + +S V++FG +L +
Sbjct: 147 ENHLVKVADFGLSR-LMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 205
Query: 177 LLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEG--TELVRLASRCLQSEARERPN 234
+ + + P +DL + LL D +E EG ++ L C Q +RP+
Sbjct: 206 IAT-YGMSPYPGIDLSQVYE-LLEKDYRME----RPEGCPEKVYELMRACWQWNPSDRPS 259
Query: 235 AKSLVISLMSLQKEAEV 251
+ + ++ +E+ +
Sbjct: 260 FAEIHQAFETMFQESSI 276
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 11/159 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMR--L 90
+EEA+ + L +L L G C E LV EFM + L+ +L TQ +A L
Sbjct: 51 IEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYL---RTQRGLFAAETLL 107
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN--- 147
+ L + + + Y + ++ DL A L ++ ++S FG+ + D + S+
Sbjct: 108 GMCLDVCEGMAYL-EEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK 166
Query: 148 --LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ + PE R + +S V+SFG ++ ++ S IP
Sbjct: 167 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP 205
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 105/240 (43%), Gaps = 21/240 (8%)
Query: 3 GRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLL 62
G K+S+ LK +E + L+EA + ++ L L+G C +
Sbjct: 32 GVWKKYSLTVAVKTLKEDTMEVEEF-----LKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 63 VAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD 122
+ EFM L +L Q + + L +A ++ A+EY K ++ DL A L
Sbjct: 87 ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVG 145
Query: 123 KDGNPRLSSFGLMKNSRDGKSYSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLD 176
++ +++ FGL + G +Y+ + + +T PE + + + +S V++FG +L +
Sbjct: 146 ENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 204
Query: 177 LLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEG--TELVRLASRCLQSEARERPN 234
++ + P +DL + LL D +E EG ++ L C Q +RP+
Sbjct: 205 -IATYGMSPYPGIDLSQVYE-LLEKDYRME----RPEGCPEKVYELMRACWQWNPSDRPS 258
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 112/257 (43%), Gaps = 21/257 (8%)
Query: 3 GRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLL 62
G K+S+ LK +E + L+EA + ++ L L+G C +
Sbjct: 34 GVWKKYSLTVAVKTLKEDTMEVEEF-----LKEAAVMKEIKHPNLVQLLGVCTREPPFYI 88
Query: 63 VAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD 122
+ EFM L +L Q + + L +A ++ A+EY K ++ DL A L
Sbjct: 89 ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVG 147
Query: 123 KDGNPRLSSFGLMKNSRDGKSYST------NLAFTPPEYMRTGRVTPESVVYSFGTMLLD 176
++ +++ FGL + G +Y+ + +T PE + + + +S V++FG +L +
Sbjct: 148 ENHLVKVADFGLSR-LMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 206
Query: 177 LLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEG--TELVRLASRCLQSEARERPN 234
+ + + P +DL + LL D +E EG ++ L C Q +RP+
Sbjct: 207 IAT-YGMSPYPGIDLSQVYE-LLEKDYRME----RPEGCPEKVYELMRACWQWNPSDRPS 260
Query: 235 AKSLVISLMSLQKEAEV 251
+ + ++ +E+ +
Sbjct: 261 FAEIHQAFETMFQESSI 277
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 105/240 (43%), Gaps = 21/240 (8%)
Query: 3 GRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLL 62
G K+S+ LK +E + L+EA + ++ L L+G C +
Sbjct: 37 GVWKKYSLTVAVKTLKEDTMEVEEF-----LKEAAVMKEIKHPNLVQLLGVCTREPPFYI 91
Query: 63 VAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD 122
+ EFM L +L Q + + L +A ++ A+EY K ++ DL A L
Sbjct: 92 IIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVG 150
Query: 123 KDGNPRLSSFGLMKNSRDGKSYSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLD 176
++ +++ FGL + G +Y+ + + +T PE + + + +S V++FG +L +
Sbjct: 151 ENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 209
Query: 177 LLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEG--TELVRLASRCLQSEARERPN 234
+ + + P +DL + LL D +E EG ++ L C Q +RP+
Sbjct: 210 IAT-YGMSPYPGIDLSQVYE-LLEKDYRME----RPEGCPEKVYELMRACWQWNPSDRPS 263
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 88/192 (45%), Gaps = 13/192 (6%)
Query: 2 GGRCSKFSICWFHCHLKSSV--LESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADE 59
G+ + + +++ H K +V L+ + L EA + L+ +RL L + +
Sbjct: 23 AGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EP 81
Query: 60 RLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRI 119
++ E+M N +L L + L +A +A+ + + + ++ DL A I
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANI 140
Query: 120 LFDKDGNPRLSSFGLMK-------NSRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGT 172
L + +++ FGL + +R+G + + +T PE + G T +S V+SFG
Sbjct: 141 LVSDTLSCKIADFGLARLIEDAEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGI 198
Query: 173 MLLDLLSGKHIP 184
+L ++++ IP
Sbjct: 199 LLTEIVTHGRIP 210
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 81/185 (43%), Gaps = 33/185 (17%)
Query: 98 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----P 153
QALE+ S + ++ D+ + IL DG+ +L+ FG +S + + TP P
Sbjct: 128 QALEFLHS-NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAP 186
Query: 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDE 213
E + P+ ++S G M ++++ G+ PP + +R+ L L+ + N E
Sbjct: 187 EVVTRKAYGPKVDIWSLGIMAIEMIEGE--PPYLNENPLRA---LYLIATNGTPELQNPE 241
Query: 214 GTELV--RLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLLGIQHETAPSTKPL- 270
+ +RCL+ + +R +AK L IQH+ KPL
Sbjct: 242 KLSAIFRDFLNRCLEMDVEKRGSAKEL--------------------IQHQFLKIAKPLS 281
Query: 271 SLTPL 275
SLTPL
Sbjct: 282 SLTPL 286
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 11/159 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMR--L 90
+EEA+ + L +L L G C E LV EFM + L+ +L TQ +A L
Sbjct: 48 IEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL---RTQRGLFAAETLL 104
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN--- 147
+ L + + + Y + ++ DL A L ++ ++S FG+ + D + S+
Sbjct: 105 GMCLDVCEGMAYL-EEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK 163
Query: 148 --LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ + PE R + +S V+SFG ++ ++ S IP
Sbjct: 164 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP 202
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 104/241 (43%), Gaps = 25/241 (10%)
Query: 34 EEAKAVGNLRSERLANLIGCCYEADER--LLVAEFMPNETLAKHLFHWETQPMKWAMRLR 91
+E + L E + GCC +A LV E++P +L +L + A L
Sbjct: 82 QEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL---PRHSIGLAQLLL 138
Query: 92 VALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY------- 144
A + + + Y ++ ++ DL A +L D D ++ FGL K +G
Sbjct: 139 FAQQICEGMAYLHAQ-HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDG 197
Query: 145 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS---GKHIPPSHALDLI---RSKNFL 198
+ + + PE ++ + S V+SFG L +LL+ PP+ L+LI + + +
Sbjct: 198 DSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTV 257
Query: 199 LLMDSALEGH----FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQK--EAEVP 252
L + LE + E+ L C ++EA RP ++L+ L ++ + + + P
Sbjct: 258 LRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQAP 317
Query: 253 S 253
S
Sbjct: 318 S 318
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 11/170 (6%)
Query: 22 LESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWET 81
++ + E +EEA+ + L +L L G C E LV EFM + L+ +L T
Sbjct: 59 IKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL---RT 115
Query: 82 QPMKWAMR--LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSR 139
Q +A L + L + + + Y + ++ DL A L ++ ++S FG+ +
Sbjct: 116 QRGLFAAETLLGMCLDVCEGMAYL-EEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVL 174
Query: 140 DGKSYSTN-----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
D + S+ + + PE R + +S V+SFG ++ ++ S IP
Sbjct: 175 DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP 224
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 105/245 (42%), Gaps = 22/245 (8%)
Query: 17 LKSSVLESSDLGETLNLE-------EAKAVGNLRSERLANLIGCCYEADERLLVAEFMPN 69
+KS +L S+ GET +E E + NL + L G + +V EF+P
Sbjct: 49 IKSLILGDSE-GETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPC 105
Query: 70 ETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDK-DGN- 126
L L + P+KW+++LR+ L +A +EY ++ + H DL + I D N
Sbjct: 106 GDLYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENA 164
Query: 127 ---PRLSSFGLMKNSRDGKS-YSTNLAFTPPEYM--RTGRVTPESVVYSFGTMLLDLLSG 180
+++ FGL + S S N + PE + T ++ YSF +L +L+G
Sbjct: 165 PVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG 224
Query: 181 KHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVI 240
+ ++ I+ N ++ + L D L + C + ++RP+ +V
Sbjct: 225 EGPFDEYSYGKIKFIN--MIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK 282
Query: 241 SLMSL 245
L L
Sbjct: 283 ELSEL 287
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 11/159 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMR--L 90
+EEA+ + L +L L G C E LV EFM + L+ +L TQ +A L
Sbjct: 50 IEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL---RTQRGLFAAETLL 106
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN--- 147
+ L + + + Y + ++ DL A L ++ ++S FG+ + D + S+
Sbjct: 107 GMCLDVCEGMAYL-EEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK 165
Query: 148 --LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ + PE R + +S V+SFG ++ ++ S IP
Sbjct: 166 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP 204
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN----- 147
L +A+ +EY + + + ++ DL A + D+ +++ FGL ++ D + YS
Sbjct: 130 GLQVARGMEYLAEQ-KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHA 188
Query: 148 ---LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA 204
+ +T E ++T R T +S V+SFG +L +LL+ + PP +D +FL
Sbjct: 189 RLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLT-RGAPPYRHIDPFDLTHFLAQGRRL 247
Query: 205 LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
+ + D L ++ +C +++ RP + LV
Sbjct: 248 PQPEYCPD---SLYQVMQQCWEADPAVRPTFRVLV 279
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 11/159 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMR--L 90
+EEA+ + L +L L G C E LV EFM + L+ +L TQ +A L
Sbjct: 53 IEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL---RTQRGLFAAETLL 109
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN--- 147
+ L + + + Y + ++ DL A L ++ ++S FG+ + D + S+
Sbjct: 110 GMCLDVCEGMAYL-EEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK 168
Query: 148 --LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ + PE R + +S V+SFG ++ ++ S IP
Sbjct: 169 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP 207
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 88/192 (45%), Gaps = 13/192 (6%)
Query: 2 GGRCSKFSICWFHCHLKSSV--LESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADE 59
G+ + + +++ H K +V L+ + L EA + L+ +RL L + +
Sbjct: 18 AGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EP 76
Query: 60 RLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRI 119
++ E+M N +L L + L +A +A+ + + + ++ DL A I
Sbjct: 77 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANI 135
Query: 120 LFDKDGNPRLSSFGLMK-------NSRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGT 172
L + +++ FGL + +R+G + + +T PE + G T +S V+SFG
Sbjct: 136 LVSDTLSCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGI 193
Query: 173 MLLDLLSGKHIP 184
+L ++++ IP
Sbjct: 194 LLTEIVTHGRIP 205
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 93/214 (43%), Gaps = 17/214 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
LEEA+ + L+ ++L L E + +V E+M +L L E + +K + +
Sbjct: 52 LEEAQIMKKLKHDKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDM 110
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYS 145
A +A + Y + ++ DL + IL +++ FGL + +R G +
Sbjct: 111 AAQVAAGMAYIE-RMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFP 169
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-PSHALDLIRSKNFLLLMDSA 204
+ +T PE GR T +S V+SFG +L +L++ +P P + ++ L ++
Sbjct: 170 --IKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPG-----MNNREVLEQVERG 222
Query: 205 LEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
D L L C + + ERP + L
Sbjct: 223 YRMPCPQDCPISLHELMIHCWKKDPEERPTFEYL 256
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 88/192 (45%), Gaps = 13/192 (6%)
Query: 2 GGRCSKFSICWFHCHLKSSV--LESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADE 59
G+ + + +++ H K +V L+ + L EA + L+ +RL L + +
Sbjct: 31 AGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EP 89
Query: 60 RLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRI 119
++ E+M N +L L + L +A +A+ + + + ++ DL A I
Sbjct: 90 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANI 148
Query: 120 LFDKDGNPRLSSFGLMK-------NSRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGT 172
L + +++ FGL + +R+G + + +T PE + G T +S V+SFG
Sbjct: 149 LVSDTLSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGI 206
Query: 173 MLLDLLSGKHIP 184
+L ++++ IP
Sbjct: 207 LLTEIVTHGRIP 218
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 88/192 (45%), Gaps = 13/192 (6%)
Query: 2 GGRCSKFSICWFHCHLKSSV--LESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADE 59
G+ + + +++ H K +V L+ + L EA + L+ +RL L + +
Sbjct: 29 AGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EP 87
Query: 60 RLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRI 119
++ E+M N +L L + L +A +A+ + + + ++ DL A I
Sbjct: 88 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANI 146
Query: 120 LFDKDGNPRLSSFGLMK-------NSRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGT 172
L + +++ FGL + +R+G + + +T PE + G T +S V+SFG
Sbjct: 147 LVSDTLSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGI 204
Query: 173 MLLDLLSGKHIP 184
+L ++++ IP
Sbjct: 205 LLTEIVTHGRIP 216
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 88/192 (45%), Gaps = 13/192 (6%)
Query: 2 GGRCSKFSICWFHCHLKSSV--LESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADE 59
G+ + + +++ H K +V L+ + L EA + L+ +RL L + +
Sbjct: 23 AGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EP 81
Query: 60 RLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRI 119
++ E+M N +L L + L +A +A+ + + + ++ DL A I
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANI 140
Query: 120 LFDKDGNPRLSSFGLMK-------NSRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGT 172
L + +++ FGL + +R+G + + +T PE + G T +S V+SFG
Sbjct: 141 LVSDTLSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGI 198
Query: 173 MLLDLLSGKHIP 184
+L ++++ IP
Sbjct: 199 LLTEIVTHGRIP 210
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 88/192 (45%), Gaps = 13/192 (6%)
Query: 2 GGRCSKFSICWFHCHLKSSV--LESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADE 59
G+ + + +++ H K +V L+ + L EA + L+ +RL L + +
Sbjct: 32 AGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EP 90
Query: 60 RLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRI 119
++ E+M N +L L + L +A +A+ + + + ++ DL A I
Sbjct: 91 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANI 149
Query: 120 LFDKDGNPRLSSFGLMK-------NSRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGT 172
L + +++ FGL + +R+G + + +T PE + G T +S V+SFG
Sbjct: 150 LVSDTLSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGI 207
Query: 173 MLLDLLSGKHIP 184
+L ++++ IP
Sbjct: 208 LLTEIVTHGRIP 219
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 88/192 (45%), Gaps = 13/192 (6%)
Query: 2 GGRCSKFSICWFHCHLKSSV--LESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADE 59
G+ + + +++ H K +V L+ + L EA + L+ +RL L + +
Sbjct: 33 AGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EP 91
Query: 60 RLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRI 119
++ E+M N +L L + L +A +A+ + + + ++ DL A I
Sbjct: 92 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANI 150
Query: 120 LFDKDGNPRLSSFGLMK-------NSRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGT 172
L + +++ FGL + +R+G + + +T PE + G T +S V+SFG
Sbjct: 151 LVSDTLSCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGI 208
Query: 173 MLLDLLSGKHIP 184
+L ++++ IP
Sbjct: 209 LLTEIVTHGRIP 220
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 88/192 (45%), Gaps = 13/192 (6%)
Query: 2 GGRCSKFSICWFHCHLKSSV--LESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADE 59
G+ + + +++ H K +V L+ + L EA + L+ +RL L + +
Sbjct: 29 AGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EP 87
Query: 60 RLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRI 119
++ E+M N +L L + L +A +A+ + + + ++ DL A I
Sbjct: 88 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANI 146
Query: 120 LFDKDGNPRLSSFGLMK-------NSRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGT 172
L + +++ FGL + +R+G + + +T PE + G T +S V+SFG
Sbjct: 147 LVSDTLSCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGI 204
Query: 173 MLLDLLSGKHIP 184
+L ++++ IP
Sbjct: 205 LLTEIVTHGRIP 216
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 11/159 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA+ + LR E+L L E + +V E+M +L L + ++ + +
Sbjct: 227 LQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDM 285
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYS 145
A +A + Y + ++ DL A IL ++ +++ FGL + +R G +
Sbjct: 286 AAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 344
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ +T PE GR T +S V+SFG +L +L + +P
Sbjct: 345 --IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 93/227 (40%), Gaps = 24/227 (10%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA+ + + LIG C + +V E + L T+ RLRV
Sbjct: 160 LQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL---RTE----GARLRV 212
Query: 93 ALYL------AQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST 146
L A +EY SK ++ DL A L + ++S FG+ + DG ++
Sbjct: 213 KTLLQMVGDAAAGMEYLESKC-CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAAS 271
Query: 147 N------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLL 200
+ +T PE + GR + ES V+SFG +L + S P L +++ F+
Sbjct: 272 GGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS-LGASPYPNLSNQQTREFVEK 330
Query: 201 MDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQK 247
D + RL +C E +RP+ ++ L S++K
Sbjct: 331 GGRLPCPELCPD---AVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 88/192 (45%), Gaps = 13/192 (6%)
Query: 2 GGRCSKFSICWFHCHLKSSV--LESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADE 59
G+ + + +++ H K +V L+ + L EA + L+ +RL L + +
Sbjct: 28 AGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EP 86
Query: 60 RLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRI 119
++ E+M N +L L + L +A +A+ + + + ++ DL A I
Sbjct: 87 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANI 145
Query: 120 LFDKDGNPRLSSFGLMK-------NSRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGT 172
L + +++ FGL + +R+G + + +T PE + G T +S V+SFG
Sbjct: 146 LVSDTLSCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGI 203
Query: 173 MLLDLLSGKHIP 184
+L ++++ IP
Sbjct: 204 LLTEIVTHGRIP 215
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 88/192 (45%), Gaps = 13/192 (6%)
Query: 2 GGRCSKFSICWFHCHLKSSV--LESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADE 59
G+ + + +++ H K +V L+ + L EA + L+ +RL L + +
Sbjct: 24 AGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EP 82
Query: 60 RLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRI 119
++ E+M N +L L + L +A +A+ + + + ++ DL A I
Sbjct: 83 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANI 141
Query: 120 LFDKDGNPRLSSFGLMK-------NSRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGT 172
L + +++ FGL + +R+G + + +T PE + G T +S V+SFG
Sbjct: 142 LVSDTLSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGI 199
Query: 173 MLLDLLSGKHIP 184
+L ++++ IP
Sbjct: 200 LLTEIVTHGRIP 211
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 11/159 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA+ + LR E+L L E + +V E+M +L L + ++ + +
Sbjct: 227 LQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM 285
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYS 145
A +A + Y + ++ DL A IL ++ +++ FGL + +R G +
Sbjct: 286 AAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 344
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ +T PE GR T +S V+SFG +L +L + +P
Sbjct: 345 --IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 88/192 (45%), Gaps = 13/192 (6%)
Query: 2 GGRCSKFSICWFHCHLKSSV--LESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADE 59
G+ + + +++ H K +V L+ + L EA + L+ +RL L + +
Sbjct: 23 AGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EP 81
Query: 60 RLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRI 119
++ E+M N +L L + L +A +A+ + + + ++ DL A I
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANI 140
Query: 120 LFDKDGNPRLSSFGLMK-------NSRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGT 172
L + +++ FGL + +R+G + + +T PE + G T +S V+SFG
Sbjct: 141 LVSDTLSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGI 198
Query: 173 MLLDLLSGKHIP 184
+L ++++ IP
Sbjct: 199 LLTEIVTHGRIP 210
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 99/228 (43%), Gaps = 22/228 (9%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADER--LLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
E + + +L+ + + G CY A R L+ E++P +L +L + + L+
Sbjct: 61 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQY 119
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-------S 145
+ + +EY +K R ++ DL IL + + ++ FGL K K +
Sbjct: 120 TSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGE 178
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS---GKHIPPSHALDLI-RSKNFLLLM 201
+ + + PE + + + S V+SFG +L +L + PP+ + +I K +++
Sbjct: 179 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 238
Query: 202 DSALE-----GHFSNDEG--TELVRLASRCLQSEARERPNAKSLVISL 242
+E G +G E+ + + C + +RP+ + L + +
Sbjct: 239 FHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 286
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 88/192 (45%), Gaps = 13/192 (6%)
Query: 2 GGRCSKFSICWFHCHLKSSV--LESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADE 59
G+ + + +++ H K +V L+ + L EA + L+ +RL L + +
Sbjct: 25 AGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EP 83
Query: 60 RLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRI 119
++ E+M N +L L + L +A +A+ + + + ++ DL A I
Sbjct: 84 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANI 142
Query: 120 LFDKDGNPRLSSFGLMK-------NSRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGT 172
L + +++ FGL + +R+G + + +T PE + G T +S V+SFG
Sbjct: 143 LVSDTLSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGI 200
Query: 173 MLLDLLSGKHIP 184
+L ++++ IP
Sbjct: 201 LLTEIVTHGRIP 212
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 113/257 (43%), Gaps = 21/257 (8%)
Query: 3 GRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLL 62
G K+S+ LK +E + L+EA + ++ L L+G C +
Sbjct: 236 GVWKKYSLTVAVKTLKEDTMEVEEF-----LKEAAVMKEIKHPNLVQLLGVCTREPPFYI 290
Query: 63 VAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD 122
+ EFM L +L Q + + L +A ++ A+EY K ++ +L A L
Sbjct: 291 ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK-NFIHRNLAARNCLVG 349
Query: 123 KDGNPRLSSFGLMKNSRDGKSYSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLD 176
++ +++ FGL + G +Y+ + + +T PE + + + +S V++FG +L +
Sbjct: 350 ENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 408
Query: 177 LLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEG--TELVRLASRCLQSEARERPN 234
+ + + P +DL + LL D +E EG ++ L C Q +RP+
Sbjct: 409 IAT-YGMSPYPGIDLSQVYE-LLEKDYRME----RPEGCPEKVYELMRACWQWNPSDRPS 462
Query: 235 AKSLVISLMSLQKEAEV 251
+ + ++ +E+ +
Sbjct: 463 FAEIHQAFETMFQESSI 479
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 88/192 (45%), Gaps = 13/192 (6%)
Query: 2 GGRCSKFSICWFHCHLKSSV--LESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADE 59
G+ + + +++ H K +V L+ + L EA + L+ +RL L + +
Sbjct: 23 AGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EP 81
Query: 60 RLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRI 119
++ E+M N +L L + L +A +A+ + + + ++ DL A I
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANI 140
Query: 120 LFDKDGNPRLSSFGLMK-------NSRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGT 172
L + +++ FGL + +R+G + + +T PE + G T +S V+SFG
Sbjct: 141 LVSDTLSCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGI 198
Query: 173 MLLDLLSGKHIP 184
+L ++++ IP
Sbjct: 199 LLTEIVTHGRIP 210
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 11/159 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA+ + LR E+L L E + +V E+M +L L + ++ + +
Sbjct: 227 LQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM 285
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYS 145
A +A + Y + ++ DL A IL ++ +++ FGL + +R G +
Sbjct: 286 AAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 344
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ +T PE GR T +S V+SFG +L +L + +P
Sbjct: 345 --IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 94/229 (41%), Gaps = 17/229 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
E A + L + L G C+ DE +LV EF+ +L +L + +L V
Sbjct: 60 FEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKK-NKNCINILWKLEV 118
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILF-----DKDGNP---RLSSFGLMKNSRDGKSY 144
A LA A+ + + ++ ++ A IL K GNP +LS G+
Sbjct: 119 AKQLAWAMHFL-EENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDIL 177
Query: 145 STNLAFTPPEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 203
+ + PPE + + + + +SFGT L ++ SG P S ALD R F
Sbjct: 178 QERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLS-ALDSQRKLQFY----- 231
Query: 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVP 252
+ EL L + C+ E RP+ ++++ L SL VP
Sbjct: 232 EDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVP 280
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 11/159 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA+ + LR E+L L E + +V E+M +L L + ++ + +
Sbjct: 310 LQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM 368
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYS 145
A +A + Y + ++ DL A IL ++ +++ FGL + +R G +
Sbjct: 369 AAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 427
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ +T PE GR T +S V+SFG +L +L + +P
Sbjct: 428 --IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 464
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 93/227 (40%), Gaps = 24/227 (10%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA+ + + LIG C + +V E + L T+ RLRV
Sbjct: 160 LQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL---RTE----GARLRV 212
Query: 93 ALYL------AQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST 146
L A +EY SK ++ DL A L + ++S FG+ + DG ++
Sbjct: 213 KTLLQMVGDAAAGMEYLESKC-CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAAS 271
Query: 147 N------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLL 200
+ +T PE + GR + ES V+SFG +L + S P L +++ F+
Sbjct: 272 GGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS-LGASPYPNLSNQQTREFVEK 330
Query: 201 MDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQK 247
D + RL +C E +RP+ ++ L S++K
Sbjct: 331 GGRLPCPELCPD---AVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 91/202 (45%), Gaps = 14/202 (6%)
Query: 3 GRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLL 62
G K+S+ LK +E + L+EA + ++ L L+G C +
Sbjct: 51 GVWKKYSLTVAVKTLKEDTMEVEEF-----LKEAAVMKEIKHPNLVQLLGVCTLEPPFYI 105
Query: 63 VAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD 122
V E+MP L +L + + + L +A ++ A+EY K ++ DL A L
Sbjct: 106 VTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVG 164
Query: 123 KDGNPRLSSFGLMKNSRDGKSYSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLD 176
++ +++ FGL + G +Y+ + + +T PE + + +S V++FG +L +
Sbjct: 165 ENHVVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWE 223
Query: 177 LLSGKHIPPSHALDLIRSKNFL 198
+ + + P +DL + + L
Sbjct: 224 IAT-YGMSPYPGIDLSQVYDLL 244
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 113/257 (43%), Gaps = 21/257 (8%)
Query: 3 GRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLL 62
G K+S+ LK +E + L+EA + ++ L L+G C +
Sbjct: 278 GVWKKYSLTVAVKTLKEDTMEVEEF-----LKEAAVMKEIKHPNLVQLLGVCTREPPFYI 332
Query: 63 VAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD 122
+ EFM L +L Q + + L +A ++ A+EY K ++ +L A L
Sbjct: 333 ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK-NFIHRNLAARNCLVG 391
Query: 123 KDGNPRLSSFGLMKNSRDGKSYSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLD 176
++ +++ FGL + G +Y+ + + +T PE + + + +S V++FG +L +
Sbjct: 392 ENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 450
Query: 177 LLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEG--TELVRLASRCLQSEARERPN 234
+ + + P +DL + LL D +E EG ++ L C Q +RP+
Sbjct: 451 IAT-YGMSPYPGIDLSQVYE-LLEKDYRME----RPEGCPEKVYELMRACWQWNPSDRPS 504
Query: 235 AKSLVISLMSLQKEAEV 251
+ + ++ +E+ +
Sbjct: 505 FAEIHQAFETMFQESSI 521
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 99/228 (43%), Gaps = 22/228 (9%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADER--LLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
E + + +L+ + + G CY A R L+ EF+P +L ++L + + L+
Sbjct: 64 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYL-QKHKERIDHIKLLQY 122
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-------S 145
+ + +EY +K R ++ DL IL + + ++ FGL K K
Sbjct: 123 TSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 181
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS---GKHIPPSHALDLI-RSKNFLLLM 201
+ + + PE + + + S V+SFG +L +L + PP+ + +I K +++
Sbjct: 182 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 241
Query: 202 DSALE-----GHFSNDEG--TELVRLASRCLQSEARERPNAKSLVISL 242
+E G +G E+ + + C + +RP+ + L + +
Sbjct: 242 FHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 289
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 113/257 (43%), Gaps = 21/257 (8%)
Query: 3 GRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLL 62
G K+S+ LK +E + L+EA + ++ L L+G C +
Sbjct: 239 GVWKKYSLTVAVKTLKEDTMEVEEF-----LKEAAVMKEIKHPNLVQLLGVCTREPPFYI 293
Query: 63 VAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD 122
+ EFM L +L Q + + L +A ++ A+EY K ++ +L A L
Sbjct: 294 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK-NFIHRNLAARNCLVG 352
Query: 123 KDGNPRLSSFGLMKNSRDGKSYSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLD 176
++ +++ FGL + G +Y+ + + +T PE + + + +S V++FG +L +
Sbjct: 353 ENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 411
Query: 177 LLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEG--TELVRLASRCLQSEARERPN 234
+ + + P +DL + LL D +E EG ++ L C Q +RP+
Sbjct: 412 IAT-YGMSPYPGIDLSQVYE-LLEKDYRME----RPEGCPEKVYELMRACWQWNPSDRPS 465
Query: 235 AKSLVISLMSLQKEAEV 251
+ + ++ +E+ +
Sbjct: 466 FAEIHQAFETMFQESSI 482
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 93/213 (43%), Gaps = 15/213 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA+ + LR E+L L E + +V E+M +L L + ++ + +
Sbjct: 51 LQEAQVMKKLRHEKLVQLYAVVSE-EPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM 109
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYS 145
A +A + Y + ++ DL A IL ++ +++ FGL + +R G +
Sbjct: 110 AAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFP 168
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL 205
+ +T PE GR T +S V+SFG +L +L + +P ++ + L ++
Sbjct: 169 --IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN----REVLDQVERGY 222
Query: 206 EGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
+ L L +C + E ERP + L
Sbjct: 223 RMPCPPECPESLHDLMCQCWRKEPEERPTFEYL 255
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 93/213 (43%), Gaps = 15/213 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA+ + LR E+L L E + +V E+M +L L + ++ + +
Sbjct: 54 LQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM 112
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYS 145
A +A + Y + ++ DL A IL ++ +++ FGL + +R G +
Sbjct: 113 AAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 171
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL 205
+ +T PE GR T +S V+SFG +L +L + +P ++ + L ++
Sbjct: 172 --IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN----REVLDQVERGY 225
Query: 206 EGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
+ L L +C + E ERP + L
Sbjct: 226 RMPCPPECPESLHDLMCQCWRKEPEERPTFEYL 258
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 81/185 (43%), Gaps = 33/185 (17%)
Query: 98 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----P 153
QALE+ S + ++ D+ + IL DG+ +L+ FG +S + + TP P
Sbjct: 127 QALEFLHS-NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAP 185
Query: 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDE 213
E + P+ ++S G M ++++ G+ PP + +R+ L L+ + N E
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGE--PPYLNENPLRA---LYLIATNGTPELQNPE 240
Query: 214 GTELV--RLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLLGIQHETAPSTKPL- 270
+ +RCL+ + +R +AK L +QH+ KPL
Sbjct: 241 KLSAIFRDFLNRCLEMDVEKRGSAKEL--------------------LQHQFLKIAKPLS 280
Query: 271 SLTPL 275
SLTPL
Sbjct: 281 SLTPL 285
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 111/258 (43%), Gaps = 23/258 (8%)
Query: 3 GRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLL 62
G K+S+ LK +E + L+EA + ++ L L+G C +
Sbjct: 33 GVWKKYSLTVAVKTLKEDTMEVEEF-----LKEAAVMKEIKHPNLVQLLGVCTREPPFYI 87
Query: 63 VAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD 122
+ EFM L +L Q + + L +A ++ A+EY K ++ DL A L
Sbjct: 88 IIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVG 146
Query: 123 KDGNPRLSSFGLMK-------NSRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLL 175
++ +++ FGL + + G + + +T PE + + + +S V++FG +L
Sbjct: 147 ENHLVKVADFGLSRLMTGDTXTAHAGAKFP--IKWTAPESLAYNKFSIKSDVWAFGVLLW 204
Query: 176 DLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEG--TELVRLASRCLQSEARERP 233
++ + + P +DL + LL D +E EG ++ L C Q +RP
Sbjct: 205 EIAT-YGMSPYPGIDLSQVYE-LLEKDYRME----RPEGCPEKVYELMRACWQWNPSDRP 258
Query: 234 NAKSLVISLMSLQKEAEV 251
+ + + ++ +E+ +
Sbjct: 259 SFAEIHQAFETMFQESSI 276
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 81/185 (43%), Gaps = 33/185 (17%)
Query: 98 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----P 153
QALE+ S + ++ ++ + IL DG+ +L+ FG +S + + TP P
Sbjct: 128 QALEFLHS-NQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP 186
Query: 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDE 213
E + P+ ++S G M ++++ G+ PP + +R+ L L+ + N E
Sbjct: 187 EVVTRKAYGPKVDIWSLGIMAIEMIEGE--PPYLNENPLRA---LYLIATNGTPELQNPE 241
Query: 214 GTELV--RLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLLGIQHETAPSTKPL- 270
+ +RCL+ + +R +AK L IQH+ KPL
Sbjct: 242 KLSAIFRDFLNRCLEMDVEKRGSAKEL--------------------IQHQFLKIAKPLS 281
Query: 271 SLTPL 275
SLTPL
Sbjct: 282 SLTPL 286
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 99/228 (43%), Gaps = 22/228 (9%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADER--LLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
E + + +L+ + + G CY A R L+ E++P +L +L + + L+
Sbjct: 62 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQY 120
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-------S 145
+ + +EY +K R ++ +L IL + + ++ FGL K K Y
Sbjct: 121 TSQICKGMEYLGTK-RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGE 179
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS---GKHIPPSHALDLI-RSKNFLLLM 201
+ + + PE + + + S V+SFG +L +L + PP+ + +I K +++
Sbjct: 180 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 239
Query: 202 DSALE-----GHFSNDEG--TELVRLASRCLQSEARERPNAKSLVISL 242
+E G +G E+ + + C + +RP+ + L + +
Sbjct: 240 FHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 287
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
LEEA + L+ ++L L + + ++ EFM +L L E + +
Sbjct: 55 LEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDF 114
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYS 145
+ +A+ + Y K ++ DL A +L + +++ FGL + +R+G +
Sbjct: 115 SAQIAEGMAYIERKNY-IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFP 173
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ +T PE + G T +S V+SFG +L ++++ IP
Sbjct: 174 --IKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIP 210
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 11/159 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA+ + LR E+L L E + +V E+M +L L + ++ + +
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM 119
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYS 145
A +A + Y + ++ DL A IL ++ +++ FGL + +R G +
Sbjct: 120 AAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ +T PE GR T +S V+SFG +L +L + +P
Sbjct: 179 --IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 103/241 (42%), Gaps = 23/241 (9%)
Query: 3 GRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLL 62
G K+S+ LK +E + L+EA + ++ L L+G C +
Sbjct: 37 GVWKKYSLTVAVKTLKEDTMEVEEF-----LKEAAVMKEIKHPNLVQLLGVCTREPPFYI 91
Query: 63 VAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD 122
+ EFM L +L Q + + L +A ++ A+EY K ++ DL A L
Sbjct: 92 ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVG 150
Query: 123 KDGNPRLSSFGLMK-------NSRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLL 175
++ +++ FGL + + G + + +T PE + + + +S V++FG +L
Sbjct: 151 ENHLVKVADFGLSRLMTGDTXTAHAGAKFP--IKWTAPESLAYNKFSIKSDVWAFGVLLW 208
Query: 176 DLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEG--TELVRLASRCLQSEARERP 233
++ + + P +DL + LL D +E EG ++ L C Q +RP
Sbjct: 209 EIAT-YGMSPYPGIDLSQVYE-LLEKDYRME----RPEGCPEKVYELMRACWQWNPSDRP 262
Query: 234 N 234
+
Sbjct: 263 S 263
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 11/159 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA+ + LR E+L L E + +V E+M +L L + ++ + +
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDM 119
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYS 145
A +A + Y + ++ DL A IL ++ +++ FGL + +R G +
Sbjct: 120 AAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ +T PE GR T +S V+SFG +L +L + +P
Sbjct: 179 --IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 11/159 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA+ + LR E+L L E + +V E+M +L L + ++ + +
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDM 119
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYS 145
A +A + Y + ++ DL A IL ++ +++ FGL + +R G +
Sbjct: 120 AAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFP 178
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ +T PE GR T +S V+SFG +L +L + +P
Sbjct: 179 --IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 104/245 (42%), Gaps = 22/245 (8%)
Query: 17 LKSSVLESSDLGETLNLE-------EAKAVGNLRSERLANLIGCCYEADERLLVAEFMPN 69
+KS +L S+ GET +E E + NL + L G + +V EF+P
Sbjct: 49 IKSLILGDSE-GETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPC 105
Query: 70 ETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDK-DGN- 126
L L + P+KW+++LR+ L +A +EY ++ + H DL + I D N
Sbjct: 106 GDLYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENA 164
Query: 127 ---PRLSSFGLMKNSRDGKS-YSTNLAFTPPEYM--RTGRVTPESVVYSFGTMLLDLLSG 180
+++ FG + S S N + PE + T ++ YSF +L +L+G
Sbjct: 165 PVCAKVADFGTSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG 224
Query: 181 KHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVI 240
+ ++ I+ N ++ + L D L + C + ++RP+ +V
Sbjct: 225 EGPFDEYSYGKIKFIN--MIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK 282
Query: 241 SLMSL 245
L L
Sbjct: 283 ELSEL 287
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 11/159 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA+ + LR E+L L E + +V E+M +L L + ++ + +
Sbjct: 52 LQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM 110
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYS 145
A +A + Y + ++ DL A IL ++ +++ FGL + +R G +
Sbjct: 111 AAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 169
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ +T PE GR T +S V+SFG +L +L + +P
Sbjct: 170 --IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 206
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 33/185 (17%)
Query: 98 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----P 153
QALE+ S + ++ D+ + IL DG+ +L+ FG +S + + TP P
Sbjct: 127 QALEFLHS-NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP 185
Query: 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDE 213
E + P+ ++S G M ++++ G+ PP + +R+ L L+ + N E
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGE--PPYLNENPLRA---LYLIATNGTPELQNPE 240
Query: 214 GTELV--RLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLLGIQHETAPSTKPL- 270
+ +RCL + +R +AK L +QH+ KPL
Sbjct: 241 KLSAIFRDFLNRCLDMDVEKRGSAKEL--------------------LQHQFLKIAKPLS 280
Query: 271 SLTPL 275
SLTPL
Sbjct: 281 SLTPL 285
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 89/201 (44%), Gaps = 18/201 (8%)
Query: 3 GRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLL 62
G K+S+ LK +E + L+EA + ++ L L+G C +
Sbjct: 30 GVWKKYSLTVAVKTLKEDTMEVEEF-----LKEAAVMKEIKHPNLVQLLGVCTREPPFYI 84
Query: 63 VAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD 122
+ EFM L +L Q + + L +A ++ A+EY K ++ DL A L
Sbjct: 85 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVG 143
Query: 123 KDGNPRLSSFGLMKNSRDGKSYSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLD 176
++ +++ FGL + G +++ + + +T PE + + + +S V++FG +L +
Sbjct: 144 ENHLVKVADFGLSR-LMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 202
Query: 177 LLSGKHIP-----PSHALDLI 192
+ + P PS +L+
Sbjct: 203 IATYGMSPYPGIDPSQVYELL 223
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 11/159 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA+ + LR E+L L E + +V E+M +L L + ++ + +
Sbjct: 228 LQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM 286
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYS 145
A +A + Y + ++ DL A IL ++ +++ FGL + +R G +
Sbjct: 287 AAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFP 345
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ +T PE GR T +S V+SFG +L +L + +P
Sbjct: 346 --IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 382
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 33/185 (17%)
Query: 98 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----P 153
QALE+ S + ++ D+ + IL DG+ +L+ FG +S + + TP P
Sbjct: 127 QALEFLHS-NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAP 185
Query: 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDE 213
E + P+ ++S G M ++++ G+ PP + +R+ L L+ + N E
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGE--PPYLNENPLRA---LYLIATNGTPELQNPE 240
Query: 214 GTELV--RLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLLGIQHETAPSTKPL- 270
+ +RCL + +R +AK L +QH+ KPL
Sbjct: 241 KLSAIFRDFLNRCLDMDVEKRGSAKEL--------------------LQHQFLKIAKPLS 280
Query: 271 SLTPL 275
SLTPL
Sbjct: 281 SLTPL 285
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 110/252 (43%), Gaps = 39/252 (15%)
Query: 17 LKSSVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75
LKS E DL + ++ +E K +G + + + NL+G C + ++ E+ L ++
Sbjct: 68 LKSDATEK-DLSDLISEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREY 124
Query: 76 LFHWETQPMKWAMR--------------LRVALYLAQALEYCSSKGRALYHDLNAYRILF 121
L E ++++ + A +A+ +EY +SK + ++ DL A +L
Sbjct: 125 LQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLV 183
Query: 122 DKDGNPRLSSFGLMKNSRDGKSY--STN----LAFTPPEYMRTGRVTPESVVYSFGTMLL 175
+D +++ FGL ++ Y +TN + + PE + T +S V+SFG +L
Sbjct: 184 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLW 243
Query: 176 DL--LSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEG---TELVRLASRCLQSEAR 230
++ L G P +L F LL EGH + EL + C +
Sbjct: 244 EIFTLGGSPYPGVPVEEL-----FKLLK----EGHRMDKPSNCTNELYMMMRDCWHAVPS 294
Query: 231 ERPNAKSLVISL 242
+RP K LV L
Sbjct: 295 QRPTFKQLVEDL 306
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 11/159 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA+ + LR E+L L E + +V E+M +L L + ++ + +
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDM 119
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYS 145
A +A + Y + ++ DL A IL ++ +++ FGL + +R G +
Sbjct: 120 AAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ +T PE GR T +S V+SFG +L +L + +P
Sbjct: 179 --IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 11/159 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA+ + LR E+L L E + +V E+M +L L + ++ + +
Sbjct: 50 LQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM 108
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYS 145
A +A + Y + ++ DL A IL ++ +++ FGL + +R G +
Sbjct: 109 AAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 167
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ +T PE GR T +S V+SFG +L +L + +P
Sbjct: 168 --IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 204
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 11/159 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA+ + LR E+L L E + +V E+M +L L + ++ + +
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM 119
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYS 145
A +A + Y + ++ DL A IL ++ +++ FGL + +R G +
Sbjct: 120 AAQIASGMAYVE-RMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ +T PE GR T +S V+SFG +L +L + +P
Sbjct: 179 --IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 101/235 (42%), Gaps = 23/235 (9%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADER--LLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
E + + L E + GCC + E+ LV E++P +L +L + A L
Sbjct: 61 EIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL---PRHCVGLAQLLLF 117
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-------S 145
A + + + Y ++ ++ L A +L D D ++ FGL K +G Y
Sbjct: 118 AQQICEGMAYLHAQ-HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGD 176
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS---GKHIPPSHALDLI---RSKNFLL 199
+ + + PE ++ + S V+SFG L +LL+ P + +LI + + +L
Sbjct: 177 SPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVL 236
Query: 200 LMDSALEGH----FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAE 250
+ LE + E+ L C ++EA RP ++LV L + Q++ +
Sbjct: 237 RLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQTAQEKYQ 291
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 98/226 (43%), Gaps = 27/226 (11%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLR 91
L+E K + L + IG Y+ D+RL + E++ TL + ++Q W+ R+
Sbjct: 55 LKEVKVMRCLEHPNVLKFIGVLYK-DKRLNFITEYIKGGTLRGIIKSMDSQ-YPWSQRVS 112
Query: 92 VALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL----------------M 135
A +A + Y S ++ DLN++ L ++ N ++ FGL +
Sbjct: 113 FAKDIASGMAYLHSMN-IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSL 171
Query: 136 KNSRDGKSYST--NLAFTPPEYMRTGRVTPESV-VYSFGTMLLDLLSGKHIPPSHALDLI 192
K K Y+ N + PE M GR E V V+SFG +L +++ + P + L
Sbjct: 172 KKPDRKKRYTVVGNPYWMAPE-MINGRSYDEKVDVFSFGIVLCEIIGRVNADPDY---LP 227
Query: 193 RSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
R+ +F L + L+ + + + RC + +RP+ L
Sbjct: 228 RTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKL 273
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 91 RVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN 147
R Y A+ L++ SKG +Y DL IL DKDG+ +++ FG+ K + G + +
Sbjct: 120 RATFYAAEIILGLQFLHSKG-IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNE 178
Query: 148 LAFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALD 190
TP PE + + +SFG +L ++L G+ P H D
Sbjct: 179 FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ--SPFHGQD 223
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 88/192 (45%), Gaps = 13/192 (6%)
Query: 2 GGRCSKFSICWFHCHLKSSV--LESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADE 59
G+ + + +++ H K +V L+ + L EA + L+ +RL L + +
Sbjct: 19 AGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EP 77
Query: 60 RLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRI 119
++ E+M N +L L + L +A +A+ + + + ++ +L A I
Sbjct: 78 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRNLRAANI 136
Query: 120 LFDKDGNPRLSSFGLMK-------NSRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGT 172
L + +++ FGL + +R+G + + +T PE + G T +S V+SFG
Sbjct: 137 LVSDTLSCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGI 194
Query: 173 MLLDLLSGKHIP 184
+L ++++ IP
Sbjct: 195 LLTEIVTHGRIP 206
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 11/159 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA+ + +R E+L L E + +V E+M +L L + ++ + +
Sbjct: 61 LQEAQVMKKIRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM 119
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYS 145
A +A + Y + ++ DL A IL ++ +++ FGL + +R G +
Sbjct: 120 AAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ +T PE GR T +S V+SFG +L +L + +P
Sbjct: 179 --IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 101/235 (42%), Gaps = 23/235 (9%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADER--LLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
E + + L E + GCC + E+ LV E++P +L +L + A L
Sbjct: 60 EIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL---PRHCVGLAQLLLF 116
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-------S 145
A + + + Y ++ ++ L A +L D D ++ FGL K +G Y
Sbjct: 117 AQQICEGMAYLHAQ-HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGD 175
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS---GKHIPPSHALDLI---RSKNFLL 199
+ + + PE ++ + S V+SFG L +LL+ P + +LI + + +L
Sbjct: 176 SPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVL 235
Query: 200 LMDSALEGH----FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAE 250
+ LE + E+ L C ++EA RP ++LV L + Q++ +
Sbjct: 236 RLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQTAQEKYQ 290
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 101/234 (43%), Gaps = 22/234 (9%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADER--LLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
E + + +L+ + + G CY A R L+ E++P +L +L + + L+
Sbjct: 92 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQY 150
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-------S 145
+ + +EY +K R ++ DL IL + + ++ FGL K K
Sbjct: 151 TSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 209
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS---GKHIPPSHALDLI-RSKNFLLLM 201
+ + + PE + + + S V+SFG +L +L + PP+ + +I K +++
Sbjct: 210 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 269
Query: 202 DSALE-----GHFSNDEG--TELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248
+E G +G E+ + + C + +RP+ + L + + ++ +
Sbjct: 270 FHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 91 RVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN 147
R Y A+ L++ SKG +Y DL IL DKDG+ +++ FG+ K + G + +
Sbjct: 119 RATFYAAEIILGLQFLHSKG-IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNX 177
Query: 148 LAFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALD 190
TP PE + + +SFG +L ++L G+ P H D
Sbjct: 178 FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ--SPFHGQD 222
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 11/159 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA+ + LR E+L L E + +V E+M L L + ++ + +
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDM 119
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYS 145
A +A + Y + ++ DL A IL ++ +++ FGL + +R G +
Sbjct: 120 AAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ +T PE GR T +S V+SFG +L +L + +P
Sbjct: 179 --IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 101/234 (43%), Gaps = 22/234 (9%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADER--LLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
E + + +L+ + + G CY A R L+ E++P +L +L + + L+
Sbjct: 59 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQY 117
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-------S 145
+ + +EY +K R ++ DL IL + + ++ FGL K K
Sbjct: 118 TSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 176
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS---GKHIPPSHALDLI-RSKNFLLLM 201
+ + + PE + + + S V+SFG +L +L + PP+ + +I K +++
Sbjct: 177 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 236
Query: 202 DSALE-----GHFSNDEG--TELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248
+E G +G E+ + + C + +RP+ + L + + ++ +
Sbjct: 237 FHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 290
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 87/202 (43%), Gaps = 20/202 (9%)
Query: 3 GRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLL 62
G K+S+ LK +E + L+EA + ++ L L+G C +
Sbjct: 30 GVWKKYSLTVAVKTLKEDTMEVEEF-----LKEAAVMKEIKHPNLVQLLGVCTREPPFYI 84
Query: 63 VAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD 122
+ EFM L +L Q + + L +A ++ A+EY K ++ DL A L
Sbjct: 85 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVG 143
Query: 123 KDGNPRLSSFGLMK-------NSRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLL 175
++ +++ FGL + + G + + +T PE + + + +S V++FG +L
Sbjct: 144 ENHLVKVADFGLSRLMTGDTXTAHAGAKFP--IKWTAPESLAYNKFSIKSDVWAFGVLLW 201
Query: 176 DLLSGKHIP-----PSHALDLI 192
++ + P PS +L+
Sbjct: 202 EIATYGMSPYPGIDPSQVYELL 223
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 98/228 (42%), Gaps = 22/228 (9%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADER--LLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
E + + +L+ + + G CY A R L+ E++P +L +L + + L+
Sbjct: 64 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQY 122
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-------S 145
+ + +EY +K R ++ DL IL + + ++ FGL K K
Sbjct: 123 TSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 181
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS---GKHIPPSHALDLI-RSKNFLLLM 201
+ + + PE + + + S V+SFG +L +L + PP+ + +I K +++
Sbjct: 182 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 241
Query: 202 DSALE-----GHFSNDEG--TELVRLASRCLQSEARERPNAKSLVISL 242
+E G +G E+ + + C + +RP+ + L + +
Sbjct: 242 FHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 289
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 98/228 (42%), Gaps = 22/228 (9%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADER--LLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
E + + +L+ + + G CY A R L+ E++P +L +L + + L+
Sbjct: 64 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QAHAERIDHIKLLQY 122
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-------S 145
+ + +EY +K R ++ DL IL + + ++ FGL K K
Sbjct: 123 TSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 181
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS---GKHIPPSHALDLI-RSKNFLLLM 201
+ + + PE + + + S V+SFG +L +L + PP+ + +I K +++
Sbjct: 182 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 241
Query: 202 DSALE-----GHFSNDEG--TELVRLASRCLQSEARERPNAKSLVISL 242
+E G +G E+ + + C + +RP+ + L + +
Sbjct: 242 FHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 289
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 98/228 (42%), Gaps = 22/228 (9%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADER--LLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
E + + +L+ + + G CY A R L+ E++P +L +L + + L+
Sbjct: 68 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQY 126
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-------S 145
+ + +EY +K R ++ DL IL + + ++ FGL K K
Sbjct: 127 TSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 185
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS---GKHIPPSHALDLI-RSKNFLLLM 201
+ + + PE + + + S V+SFG +L +L + PP+ + +I K +++
Sbjct: 186 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 245
Query: 202 DSALE-----GHFSNDEG--TELVRLASRCLQSEARERPNAKSLVISL 242
+E G +G E+ + + C + +RP+ + L + +
Sbjct: 246 FHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 293
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 98/228 (42%), Gaps = 22/228 (9%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADER--LLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
E + + +L+ + + G CY A R L+ E++P +L +L + + L+
Sbjct: 66 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQY 124
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-------S 145
+ + +EY +K R ++ DL IL + + ++ FGL K K
Sbjct: 125 TSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 183
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS---GKHIPPSHALDLI-RSKNFLLLM 201
+ + + PE + + + S V+SFG +L +L + PP+ + +I K +++
Sbjct: 184 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 243
Query: 202 DSALE-----GHFSNDEG--TELVRLASRCLQSEARERPNAKSLVISL 242
+E G +G E+ + + C + +RP+ + L + +
Sbjct: 244 FHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 291
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 98/228 (42%), Gaps = 22/228 (9%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADER--LLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
E + + +L+ + + G CY A R L+ E++P +L +L + + L+
Sbjct: 79 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQY 137
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-------S 145
+ + +EY +K R ++ DL IL + + ++ FGL K K
Sbjct: 138 TSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 196
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS---GKHIPPSHALDLI-RSKNFLLLM 201
+ + + PE + + + S V+SFG +L +L + PP+ + +I K +++
Sbjct: 197 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 256
Query: 202 DSALE-----GHFSNDEG--TELVRLASRCLQSEARERPNAKSLVISL 242
+E G +G E+ + + C + +RP+ + L + +
Sbjct: 257 FHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 304
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 104/245 (42%), Gaps = 22/245 (8%)
Query: 17 LKSSVLESSDLGETLNLE-------EAKAVGNLRSERLANLIGCCYEADERLLVAEFMPN 69
+KS +L S+ GET +E E + NL + L G + +V EF+P
Sbjct: 49 IKSLILGDSE-GETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPC 105
Query: 70 ETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDK-DGN- 126
L L + P+KW+++LR+ L +A +EY ++ + H DL + I D N
Sbjct: 106 GDLYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENA 164
Query: 127 ---PRLSSFGLMKNSRDGKS-YSTNLAFTPPEYM--RTGRVTPESVVYSFGTMLLDLLSG 180
+++ F L + S S N + PE + T ++ YSF +L +L+G
Sbjct: 165 PVCAKVADFSLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG 224
Query: 181 KHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVI 240
+ ++ I+ N ++ + L D L + C + ++RP+ +V
Sbjct: 225 EGPFDEYSYGKIKFIN--MIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK 282
Query: 241 SLMSL 245
L L
Sbjct: 283 ELSEL 287
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 98/228 (42%), Gaps = 22/228 (9%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADER--LLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
E + + +L+ + + G CY A R L+ E++P +L +L + + L+
Sbjct: 61 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQY 119
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-------S 145
+ + +EY +K R ++ DL IL + + ++ FGL K K
Sbjct: 120 TSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 178
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS---GKHIPPSHALDLI-RSKNFLLLM 201
+ + + PE + + + S V+SFG +L +L + PP+ + +I K +++
Sbjct: 179 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 238
Query: 202 DSALE-----GHFSNDEG--TELVRLASRCLQSEARERPNAKSLVISL 242
+E G +G E+ + + C + +RP+ + L + +
Sbjct: 239 FHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 286
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 8/96 (8%)
Query: 92 VALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD--GKSYS- 145
V YLA+ AL++ S G +Y DL IL D++G+ +L+ FGL K S D K+YS
Sbjct: 129 VKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 187
Query: 146 -TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSG 180
+ + PE + T + +SFG ++ ++L+G
Sbjct: 188 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 93/213 (43%), Gaps = 15/213 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA+ + LR E+L L E + +V E+M +L L + ++ + +
Sbjct: 58 LQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDM 116
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYS 145
+ +A + Y + ++ DL A IL ++ +++ FGL + +R G +
Sbjct: 117 SAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFP 175
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL 205
+ +T PE GR T +S V+SFG +L +L + +P ++ + L ++
Sbjct: 176 --IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN----REVLDQVERGY 229
Query: 206 EGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
+ L L +C + E ERP + L
Sbjct: 230 RMPCPPECPESLHDLMCQCWRKEPEERPTFEYL 262
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 93/229 (40%), Gaps = 17/229 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
E A + L + L G C DE +LV EF+ +L +L + +L V
Sbjct: 60 FEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYL-KKNKNCINILWKLEV 118
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILF-----DKDGNP---RLSSFGLMKNSRDGKSY 144
A LA A+ + + ++ ++ A IL K GNP +LS G+
Sbjct: 119 AKQLAAAMHFLE-ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDIL 177
Query: 145 STNLAFTPPEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 203
+ + PPE + + + + +SFGT L ++ SG P S ALD R F
Sbjct: 178 QERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLS-ALDSQRKLQFY----- 231
Query: 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVP 252
+ EL L + C+ E RP+ ++++ L SL VP
Sbjct: 232 EDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVP 280
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 98/228 (42%), Gaps = 22/228 (9%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADER--LLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
E + + +L+ + + G CY A R L+ E++P +L +L + + L+
Sbjct: 61 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQY 119
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-------S 145
+ + +EY +K R ++ DL IL + + ++ FGL K K
Sbjct: 120 TSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 178
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS---GKHIPPSHALDLI-RSKNFLLLM 201
+ + + PE + + + S V+SFG +L +L + PP+ + +I K +++
Sbjct: 179 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 238
Query: 202 DSALE-----GHFSNDEG--TELVRLASRCLQSEARERPNAKSLVISL 242
+E G +G E+ + + C + +RP+ + L + +
Sbjct: 239 FHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 286
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 89/210 (42%), Gaps = 16/210 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
LEEA + L+ ++L L + ++ E+M +L L E + +
Sbjct: 56 LEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDF 115
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYS 145
+ +A+ + Y K ++ DL A +L + +++ FGL + +R+G +
Sbjct: 116 SAQIAEGMAYIERKNY-IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFP 174
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-PSHALDLIRSKNFLLLMDSA 204
+ +T PE + G T +S V+SFG +L ++++ IP P + + + +
Sbjct: 175 --IKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRT-----NADVMTALSQG 227
Query: 205 LEGHFSNDEGTELVRLASRCLQSEARERPN 234
+ EL + C + +A ERP
Sbjct: 228 YRMPRVENCPDELYDIMKMCWKEKAEERPT 257
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 93/213 (43%), Gaps = 15/213 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA+ + LR E+L L E + +V E+M +L L + ++ + +
Sbjct: 58 LQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDM 116
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYS 145
+ +A + Y + ++ DL A IL ++ +++ FGL + +R G +
Sbjct: 117 SAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 175
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL 205
+ +T PE GR T +S V+SFG +L +L + +P ++ + L ++
Sbjct: 176 --IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN----REVLDQVERGY 229
Query: 206 EGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
+ L L +C + E ERP + L
Sbjct: 230 RMPCPPECPESLHDLMCQCWRKEPEERPTFEYL 262
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 98/228 (42%), Gaps = 22/228 (9%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADER--LLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
E + + +L+ + + G CY A R L+ E++P +L +L + + L+
Sbjct: 67 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQY 125
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-------S 145
+ + +EY +K R ++ DL IL + + ++ FGL K K
Sbjct: 126 TSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 184
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS---GKHIPPSHALDLI-RSKNFLLLM 201
+ + + PE + + + S V+SFG +L +L + PP+ + +I K +++
Sbjct: 185 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 244
Query: 202 DSALE-----GHFSNDEG--TELVRLASRCLQSEARERPNAKSLVISL 242
+E G +G E+ + + C + +RP+ + L + +
Sbjct: 245 FHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 292
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 98/228 (42%), Gaps = 22/228 (9%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADER--LLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
E + + +L+ + + G CY A R L+ E++P +L +L + + L+
Sbjct: 79 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQY 137
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-------S 145
+ + +EY +K R ++ DL IL + + ++ FGL K K
Sbjct: 138 TSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 196
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS---GKHIPPSHALDLI-RSKNFLLLM 201
+ + + PE + + + S V+SFG +L +L + PP+ + +I K +++
Sbjct: 197 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 256
Query: 202 DSALE-----GHFSNDEG--TELVRLASRCLQSEARERPNAKSLVISL 242
+E G +G E+ + + C + +RP+ + L + +
Sbjct: 257 FHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 304
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 98/228 (42%), Gaps = 22/228 (9%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADER--LLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
E + + +L+ + + G CY A R L+ E++P +L +L + + L+
Sbjct: 60 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQY 118
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-------S 145
+ + +EY +K R ++ DL IL + + ++ FGL K K
Sbjct: 119 TSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 177
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS---GKHIPPSHALDLI-RSKNFLLLM 201
+ + + PE + + + S V+SFG +L +L + PP+ + +I K +++
Sbjct: 178 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 237
Query: 202 DSALE-----GHFSNDEG--TELVRLASRCLQSEARERPNAKSLVISL 242
+E G +G E+ + + C + +RP+ + L + +
Sbjct: 238 FHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 285
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 8/96 (8%)
Query: 92 VALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD--GKSYS- 145
V YLA+ AL++ S G +Y DL IL D++G+ +L+ FGL K S D K+YS
Sbjct: 128 VKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 186
Query: 146 -TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSG 180
+ + PE + T + +SFG ++ ++L+G
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 11/159 (6%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L+EA+ + LR E+L L E + +V E+M L L + ++ + +
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDM 119
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYS 145
A +A + Y + ++ DL A IL ++ +++ FGL + +R G +
Sbjct: 120 AAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ +T PE GR T +S V+SFG +L +L + +P
Sbjct: 179 --IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 109/263 (41%), Gaps = 33/263 (12%)
Query: 3 GRCSKFSICWFHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLL 62
G K+S+ LK +E + L+EA + ++ L L+G C +
Sbjct: 30 GVWKKYSLTVAVKTLKEDTMEVEEF-----LKEAAVMKEIKHPNLVQLLGVCTREPPFYI 84
Query: 63 VAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFD 122
+ EFM L +L Q + + L +A ++ A+EY K ++ DL A L
Sbjct: 85 IIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVG 143
Query: 123 KDGNPRLSSFGLMK-------NSRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLL 175
++ +++ FGL + + G + + +T PE + + + +S V++FG +L
Sbjct: 144 ENHLVKVADFGLSRLMTGDTXTAHAGAKFP--IKWTAPESLAYNKFSIKSDVWAFGVLLW 201
Query: 176 DLLSGKHIP-----PSHALDLIRSKNFLLLMDSALEGHFSNDEG--TELVRLASRCLQSE 228
++ + P PS +L+ D +E EG ++ L C Q
Sbjct: 202 EIATYGMSPYPGIDPSQVYELLEK-------DYRME----RPEGCPEKVYELMRACWQWN 250
Query: 229 ARERPNAKSLVISLMSLQKEAEV 251
+RP+ + + ++ +E+ +
Sbjct: 251 PSDRPSFAEIHQAFETMFQESSI 273
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 98/228 (42%), Gaps = 22/228 (9%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADER--LLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
E + + +L+ + + G CY A R L+ E++P +L +L + + L+
Sbjct: 65 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQY 123
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-------S 145
+ + +EY +K R ++ DL IL + + ++ FGL K K
Sbjct: 124 TSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 182
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS---GKHIPPSHALDLI-RSKNFLLLM 201
+ + + PE + + + S V+SFG +L +L + PP+ + +I K +++
Sbjct: 183 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 242
Query: 202 DSALE-----GHFSNDEG--TELVRLASRCLQSEARERPNAKSLVISL 242
+E G +G E+ + + C + +RP+ + L + +
Sbjct: 243 FHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 290
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 8/96 (8%)
Query: 92 VALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD--GKSYS- 145
V YLA+ AL++ S G +Y DL IL D++G+ +L+ FGL K S D K+YS
Sbjct: 128 VKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 186
Query: 146 -TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSG 180
+ + PE + T + +SFG ++ ++L+G
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 109/252 (43%), Gaps = 39/252 (15%)
Query: 17 LKSSVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75
LKS E DL + ++ +E K +G + + + NL+G C + ++ E+ L ++
Sbjct: 68 LKSDATEK-DLSDLISEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREY 124
Query: 76 LFHWETQPMKWAMR--------------LRVALYLAQALEYCSSKGRALYHDLNAYRILF 121
L ++++ + A +A+ +EY +SK + ++ DL A +L
Sbjct: 125 LQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLV 183
Query: 122 DKDGNPRLSSFGLMKNSR--DGKSYSTN----LAFTPPEYMRTGRVTPESVVYSFGTMLL 175
+D +++ FGL ++ D +TN + + PE + T +S V+SFG +L
Sbjct: 184 TEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLW 243
Query: 176 DL--LSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEG---TELVRLASRCLQSEAR 230
++ L G P +L F LL EGH + EL + C +
Sbjct: 244 EIFTLGGSPYPGVPVEEL-----FKLLK----EGHRMDKPSNCTNELYMMMRDCWHAVPS 294
Query: 231 ERPNAKSLVISL 242
+RP K LV L
Sbjct: 295 QRPTFKQLVEDL 306
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 76/175 (43%), Gaps = 17/175 (9%)
Query: 18 KSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLL-VAEFMPNETLAKHL 76
K +L+ D+ T+ E + + R+ + CC++ +RL V EF+ L H+
Sbjct: 58 KDVILQDDDVECTMT--EKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHI 115
Query: 77 FHWETQPMKWAMRLRVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFG 133
Q + R Y A+ AL + KG +Y DL +L D +G+ +L+ FG
Sbjct: 116 -----QKSRRFDEARARFYAAEIISALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFG 169
Query: 134 LMK----NSRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ K N ++ + PE ++ P ++ G +L ++L G H P
Sbjct: 170 MCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG-HAP 223
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 79/199 (39%), Gaps = 28/199 (14%)
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAF 150
++ L +AL + + ++ D+ IL D+ GN +L FG+ D + + +
Sbjct: 129 KITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGC 188
Query: 151 TPPEYMRTGRVTP---------ESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM 201
P YM R+ P S V+S G L +L +G+ P + + +
Sbjct: 189 RP--YMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYP-------KWNSVFDQL 239
Query: 202 DSALEG---HFSNDEGTE----LVRLASRCLQSEARERPNAKSLV---ISLMSLQKEAEV 251
++G SN E E + + CL + +RP K L+ LM ++ EV
Sbjct: 240 TQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYEERAVEV 299
Query: 252 PSYVLLGIQHETAPSTKPL 270
YV + A + P+
Sbjct: 300 ACYVCKILDQMPATPSSPM 318
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 71/171 (41%), Gaps = 12/171 (7%)
Query: 31 LNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRL 90
L E + + + E + + DE +V EF+ L + H + A
Sbjct: 63 LLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA-- 120
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAF 150
V L + QAL ++G ++ D+ + IL DG +LS FG L
Sbjct: 121 -VCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVG 178
Query: 151 TP----PEYMRTGRVTPESVVYSFGTMLLDLLSGK----HIPPSHALDLIR 193
TP PE + PE ++S G M+++++ G+ + PP A+ +IR
Sbjct: 179 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR 229
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 71/171 (41%), Gaps = 12/171 (7%)
Query: 31 LNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRL 90
L E + + + E + + DE +V EF+ L + H + A
Sbjct: 67 LLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA-- 124
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAF 150
V L + QAL ++G ++ D+ + IL DG +LS FG L
Sbjct: 125 -VCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVG 182
Query: 151 TP----PEYMRTGRVTPESVVYSFGTMLLDLLSGK----HIPPSHALDLIR 193
TP PE + PE ++S G M+++++ G+ + PP A+ +IR
Sbjct: 183 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR 233
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 71/171 (41%), Gaps = 12/171 (7%)
Query: 31 LNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRL 90
L E + + + E + + DE +V EF+ L + H + A
Sbjct: 72 LLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA-- 129
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAF 150
V L + QAL ++G ++ D+ + IL DG +LS FG L
Sbjct: 130 -VCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVG 187
Query: 151 TP----PEYMRTGRVTPESVVYSFGTMLLDLLSGK----HIPPSHALDLIR 193
TP PE + PE ++S G M+++++ G+ + PP A+ +IR
Sbjct: 188 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR 238
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 71/171 (41%), Gaps = 12/171 (7%)
Query: 31 LNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRL 90
L E + + + E + + DE +V EF+ L + H + A
Sbjct: 74 LLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA-- 131
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAF 150
V L + QAL ++G ++ D+ + IL DG +LS FG L
Sbjct: 132 -VCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVG 189
Query: 151 TP----PEYMRTGRVTPESVVYSFGTMLLDLLSGK----HIPPSHALDLIR 193
TP PE + PE ++S G M+++++ G+ + PP A+ +IR
Sbjct: 190 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR 240
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 72/165 (43%), Gaps = 21/165 (12%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL--------FHWETQP--- 83
EA+ + NL+ E + G C + D ++V E+M + L K L + QP
Sbjct: 67 EAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQA 126
Query: 84 ---MKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD 140
+ + L +A +A + Y +S+ ++ DL L + ++ FG+ ++
Sbjct: 127 KGELGLSQMLHIASQIASGMVYLASQ-HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYS 185
Query: 141 GKSYSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS 179
Y + + PPE + + T ES V+SFG +L ++ +
Sbjct: 186 TDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 80/181 (44%), Gaps = 19/181 (10%)
Query: 15 CHLKS------SVLESSDLGETLNL--EEAKAVGNLRSERLANLIGCCYEADERLLVAEF 66
CH+ + +++ + LG L E +A+ NLR + + L A++ +V E+
Sbjct: 30 CHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEY 89
Query: 67 MPNETLAKHLFHWETQPMKWAMRLRVAL-YLAQALEYCSSKGRALYHDLNAYRILFDKDG 125
P L ++ +Q RV + A+ Y S+G A + DL +LFD+
Sbjct: 90 CPGGELFDYII---SQDRLSEEETRVVFRQIVSAVAYVHSQGYA-HRDLKPENLLFDEYH 145
Query: 126 NPRLSSFGLMKNSRDGKSYST-----NLAFTPPEYMR-TGRVTPESVVYSFGTMLLDLLS 179
+L FGL + K Y +LA+ PE ++ + E+ V+S G +L L+
Sbjct: 146 KLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMC 205
Query: 180 G 180
G
Sbjct: 206 G 206
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 109/252 (43%), Gaps = 39/252 (15%)
Query: 17 LKSSVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75
LKS E DL + ++ +E K +G + + + NL+G C + ++ E+ L ++
Sbjct: 109 LKSDATEK-DLSDLISEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREY 165
Query: 76 LFHWETQPMKWAMR--------------LRVALYLAQALEYCSSKGRALYHDLNAYRILF 121
L ++++ + A +A+ +EY +SK + ++ DL A +L
Sbjct: 166 LQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLV 224
Query: 122 DKDGNPRLSSFGLMKNSRDGKSY--STN----LAFTPPEYMRTGRVTPESVVYSFGTMLL 175
+D +++ FGL ++ Y +TN + + PE + T +S V+SFG +L
Sbjct: 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLW 284
Query: 176 DL--LSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEG---TELVRLASRCLQSEAR 230
++ L G P +L F LL EGH + EL + C +
Sbjct: 285 EIFTLGGSPYPGVPVEEL-----FKLLK----EGHRMDKPSNCTNELYMMMRDCWHAVPS 335
Query: 231 ERPNAKSLVISL 242
+RP K LV L
Sbjct: 336 QRPTFKQLVEDL 347
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 109/252 (43%), Gaps = 39/252 (15%)
Query: 17 LKSSVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75
LKS E DL + ++ +E K +G + + + NL+G C + ++ E+ L ++
Sbjct: 60 LKSDATEK-DLSDLISEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREY 116
Query: 76 LFHWETQPMKWAMR--------------LRVALYLAQALEYCSSKGRALYHDLNAYRILF 121
L ++++ + A +A+ +EY +SK + ++ DL A +L
Sbjct: 117 LQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLV 175
Query: 122 DKDGNPRLSSFGLMKNSRDGKSY--STN----LAFTPPEYMRTGRVTPESVVYSFGTMLL 175
+D +++ FGL ++ Y +TN + + PE + T +S V+SFG +L
Sbjct: 176 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLW 235
Query: 176 DL--LSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEG---TELVRLASRCLQSEAR 230
++ L G P +L F LL EGH + EL + C +
Sbjct: 236 EIFTLGGSPYPGVPVEEL-----FKLLK----EGHRMDKPSNCTNELYMMMRDCWHAVPS 286
Query: 231 ERPNAKSLVISL 242
+RP K LV L
Sbjct: 287 QRPTFKQLVEDL 298
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 88/217 (40%), Gaps = 21/217 (9%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE---TQPMKWAMR 89
L EA + L + + IG ++ R ++ E M L L +QP AM
Sbjct: 96 LMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 155
Query: 90 --LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD------- 140
L VA +A +Y + ++ D+ A L G R++ G +RD
Sbjct: 156 DLLHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 214
Query: 141 --GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-PSHALDLIRSKNF 197
G + + PPE G T ++ +SFG +L ++ S ++P PS + ++
Sbjct: 215 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-----NQEV 269
Query: 198 LLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234
L + S + + R+ ++C Q + +RPN
Sbjct: 270 LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 306
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 109/252 (43%), Gaps = 39/252 (15%)
Query: 17 LKSSVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75
LKS E DL + ++ +E K +G + + + NL+G C + ++ E+ L ++
Sbjct: 57 LKSDATEK-DLSDLISEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREY 113
Query: 76 LFHWETQPMKWAMR--------------LRVALYLAQALEYCSSKGRALYHDLNAYRILF 121
L ++++ + A +A+ +EY +SK + ++ DL A +L
Sbjct: 114 LQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLV 172
Query: 122 DKDGNPRLSSFGLMKNSRDGKSY--STN----LAFTPPEYMRTGRVTPESVVYSFGTMLL 175
+D +++ FGL ++ Y +TN + + PE + T +S V+SFG +L
Sbjct: 173 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLW 232
Query: 176 DL--LSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEG---TELVRLASRCLQSEAR 230
++ L G P +L F LL EGH + EL + C +
Sbjct: 233 EIFTLGGSPYPGVPVEEL-----FKLLK----EGHRMDKPSNCTNELYMMMRDCWHAVPS 283
Query: 231 ERPNAKSLVISL 242
+RP K LV L
Sbjct: 284 QRPTFKQLVEDL 295
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 88/217 (40%), Gaps = 21/217 (9%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE---TQPMKWAMR 89
L EA + L + + IG ++ R ++ E M L L +QP AM
Sbjct: 82 LMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 141
Query: 90 --LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD------- 140
L VA +A +Y + ++ D+ A L G R++ G +RD
Sbjct: 142 DLLHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 200
Query: 141 --GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-PSHALDLIRSKNF 197
G + + PPE G T ++ +SFG +L ++ S ++P PS + ++
Sbjct: 201 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-----NQEV 255
Query: 198 LLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234
L + S + + R+ ++C Q + +RPN
Sbjct: 256 LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 292
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 14/150 (9%)
Query: 96 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP--- 152
+ + L+Y S+ R ++ D+ A +L + G+ +L+ FG+ D + TP
Sbjct: 125 ILKGLDYLHSE-RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWM 183
Query: 153 -PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS--ALEGHF 209
PE ++ ++ ++S G ++L G+ PP+ L +R FL+ +S LEG
Sbjct: 184 APEVIKQSAYDFKADIWSLGITAIELAKGE--PPNSDLHPMRVL-FLIPKNSPPTLEGQH 240
Query: 210 SNDEGTELVRLASRCLQSEARERPNAKSLV 239
S CL + R RP AK L+
Sbjct: 241 SK----PFKEFVEACLNKDPRFRPTAKELL 266
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 109/252 (43%), Gaps = 39/252 (15%)
Query: 17 LKSSVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75
LKS E DL + ++ +E K +G + + + NL+G C + ++ E+ L ++
Sbjct: 68 LKSDATEK-DLSDLISEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREY 124
Query: 76 LFHWETQPMKWAMR--------------LRVALYLAQALEYCSSKGRALYHDLNAYRILF 121
L ++++ + A +A+ +EY +SK + ++ DL A +L
Sbjct: 125 LQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLV 183
Query: 122 DKDGNPRLSSFGLMKNSRDGKSY--STN----LAFTPPEYMRTGRVTPESVVYSFGTMLL 175
+D +++ FGL ++ Y +TN + + PE + T +S V+SFG +L
Sbjct: 184 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLW 243
Query: 176 DL--LSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEG---TELVRLASRCLQSEAR 230
++ L G P +L F LL EGH + EL + C +
Sbjct: 244 EIFTLGGSPYPGVPVEEL-----FKLLK----EGHRMDKPSNCTNELYMMMRDCWHAVPS 294
Query: 231 ERPNAKSLVISL 242
+RP K LV L
Sbjct: 295 QRPTFKQLVEDL 306
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 109/252 (43%), Gaps = 39/252 (15%)
Query: 17 LKSSVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75
LKS E DL + ++ +E K +G + + + NL+G C + ++ E+ L ++
Sbjct: 61 LKSDATEK-DLSDLISEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREY 117
Query: 76 LFHWETQPMKWAMR--------------LRVALYLAQALEYCSSKGRALYHDLNAYRILF 121
L ++++ + A +A+ +EY +SK + ++ DL A +L
Sbjct: 118 LQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLV 176
Query: 122 DKDGNPRLSSFGLMKNSRDGKSY--STN----LAFTPPEYMRTGRVTPESVVYSFGTMLL 175
+D +++ FGL ++ Y +TN + + PE + T +S V+SFG +L
Sbjct: 177 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLW 236
Query: 176 DL--LSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEG---TELVRLASRCLQSEAR 230
++ L G P +L F LL EGH + EL + C +
Sbjct: 237 EIFTLGGSPYPGVPVEEL-----FKLLK----EGHRMDKPSNCTNELYMMMRDCWHAVPS 287
Query: 231 ERPNAKSLVISL 242
+RP K LV L
Sbjct: 288 QRPTFKQLVEDL 299
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 108/252 (42%), Gaps = 39/252 (15%)
Query: 17 LKSSVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75
LKS E DL + ++ +E K +G + + + NL+G C + ++ E+ L ++
Sbjct: 53 LKSDATEK-DLSDLISEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREY 109
Query: 76 L--------------FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILF 121
L H + + + A +A+ +EY +SK + ++ DL A +L
Sbjct: 110 LQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLV 168
Query: 122 DKDGNPRLSSFGLMKNSRDGKSY--STN----LAFTPPEYMRTGRVTPESVVYSFGTMLL 175
+D +++ FGL ++ Y +TN + + PE + T +S V+SFG +L
Sbjct: 169 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLW 228
Query: 176 DL--LSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEG---TELVRLASRCLQSEAR 230
++ L G P +L F LL EGH + EL + C +
Sbjct: 229 EIFTLGGSPYPGVPVEEL-----FKLLK----EGHRMDKPSNCTNELYMMMRDCWHAVPS 279
Query: 231 ERPNAKSLVISL 242
+RP K LV L
Sbjct: 280 QRPTFKQLVEDL 291
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 71/171 (41%), Gaps = 12/171 (7%)
Query: 31 LNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRL 90
L E + + + E + + DE +V EF+ L + H + A
Sbjct: 117 LLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA-- 174
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAF 150
V L + QAL ++G ++ D+ + IL DG +LS FG L
Sbjct: 175 -VCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVG 232
Query: 151 TP----PEYMRTGRVTPESVVYSFGTMLLDLLSGK----HIPPSHALDLIR 193
TP PE + PE ++S G M+++++ G+ + PP A+ +IR
Sbjct: 233 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR 283
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 108/252 (42%), Gaps = 39/252 (15%)
Query: 17 LKSSVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75
LKS E DL + ++ +E K +G + + + NL+G C + ++ E+ L ++
Sbjct: 68 LKSDATEK-DLSDLISEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREY 124
Query: 76 L--------------FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILF 121
L H + + + A +A+ +EY +SK + ++ DL A +L
Sbjct: 125 LQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLV 183
Query: 122 DKDGNPRLSSFGLMKNSRDGKSY--STN----LAFTPPEYMRTGRVTPESVVYSFGTMLL 175
+D +++ FGL ++ Y +TN + + PE + T +S V+SFG +L
Sbjct: 184 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLW 243
Query: 176 DL--LSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEG---TELVRLASRCLQSEAR 230
++ L G P +L F LL EGH + EL + C +
Sbjct: 244 EIFTLGGSPYPGVPVEEL-----FKLLK----EGHRMDKPSNCTNELYMMMRDCWHAVPS 294
Query: 231 ERPNAKSLVISL 242
+RP K LV L
Sbjct: 295 QRPTFKQLVEDL 306
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 102/235 (43%), Gaps = 37/235 (15%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRL-R 91
+E K +G + + + NL+G C + ++ E+ L ++L M+++ + R
Sbjct: 91 MEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 92 V-------------ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-- 136
V LA+ +EY +S+ + ++ DL A +L ++ R++ FGL +
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMRIADFGLARDI 207
Query: 137 NSRDGKSYSTN----LAFTPPEYMRTGRVTPESVVYSFGTMLLDL--LSGKHIPPSHALD 190
N+ D +TN + + PE + T +S V+SFG ++ ++ L G P +
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 191 LIRSKNFLLLMDSALEGHFSNDEG---TELVRLASRCLQSEARERPNAKSLVISL 242
L F LL EGH + EL + C + +RP K LV L
Sbjct: 268 L-----FKLLK----EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 71/171 (41%), Gaps = 12/171 (7%)
Query: 31 LNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRL 90
L E + + + E + + DE +V EF+ L + H + A
Sbjct: 194 LLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA-- 251
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAF 150
V L + QAL ++G ++ D+ + IL DG +LS FG L
Sbjct: 252 -VCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVG 309
Query: 151 TP----PEYMRTGRVTPESVVYSFGTMLLDLLSGK----HIPPSHALDLIR 193
TP PE + PE ++S G M+++++ G+ + PP A+ +IR
Sbjct: 310 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR 360
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 87/217 (40%), Gaps = 21/217 (9%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE---TQPMKWAMR 89
L EA + + + IG ++ R ++ E M L L +QP AM
Sbjct: 81 LMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAML 140
Query: 90 --LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD------- 140
L VA +A +Y + ++ D+ A L G R++ G +RD
Sbjct: 141 DLLHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 199
Query: 141 --GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-PSHALDLIRSKNF 197
G + + PPE G T ++ +SFG +L ++ S ++P PS + ++
Sbjct: 200 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-----NQEV 254
Query: 198 LLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234
L + S + + R+ ++C Q + +RPN
Sbjct: 255 LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 291
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 94/216 (43%), Gaps = 17/216 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ--PMKWAMRL 90
L EA +G + L G ++ ++V E M N +L L + Q ++ L
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTN- 147
R +A ++Y S G A++ DL A IL + + ++S FGL + D +Y+T
Sbjct: 154 R---GIASGMKYLSDMG-AVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 148 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 203
+ +T PE + + T S V+S+G +L +++S P + +++ + +D
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVDE 265
Query: 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
D L +L C Q + RP + +V
Sbjct: 266 GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 102/235 (43%), Gaps = 37/235 (15%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRL-R 91
+E K +G + + + NL+G C + ++ E+ L ++L M+++ + R
Sbjct: 91 MEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 92 V-------------ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-- 136
V LA+ +EY +S+ + ++ DL A +L ++ +++ FGL +
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 137 NSRDGKSYSTN----LAFTPPEYMRTGRVTPESVVYSFGTMLLDL--LSGKHIPPSHALD 190
N+ D +TN + + PE + T +S V+SFG ++ ++ L G P +
Sbjct: 208 NNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 191 LIRSKNFLLLMDSALEGHFSNDEG---TELVRLASRCLQSEARERPNAKSLVISL 242
L F LL EGH + EL + C + +RP K LV L
Sbjct: 268 L-----FKLLK----EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 17/216 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ--PMKWAMRL 90
L EA +G + L G ++ ++V E+M N +L L + Q ++ L
Sbjct: 82 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 141
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTN- 147
R +A ++Y S G ++ DL A IL + + ++S FGL + D +Y+T
Sbjct: 142 R---GIASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 197
Query: 148 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 203
+ +T PE + + T S V+S+G +L +++S P + +++ + +D
Sbjct: 198 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVDE 253
Query: 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
D L +L C Q + RP + +V
Sbjct: 254 GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 289
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 17/216 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ--PMKWAMRL 90
L EA +G + L G ++ ++V E+M N +L L + Q ++ L
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTN- 147
R +A ++Y S G ++ DL A IL + + ++S FGL + D +Y+T
Sbjct: 154 R---GIASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRG 209
Query: 148 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 203
+ +T PE + + T S V+S+G +L +++S P + +++ + +D
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVDE 265
Query: 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
D L +L C Q + RP + +V
Sbjct: 266 GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 97/248 (39%), Gaps = 24/248 (9%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE---TQPMKWAMR 89
L EA + + + IG ++ R ++ E M L L +QP AM
Sbjct: 96 LMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAML 155
Query: 90 --LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD------- 140
L VA +A +Y + ++ D+ A L G R++ G +RD
Sbjct: 156 DLLHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 214
Query: 141 --GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-PSHALDLIRSKNF 197
G + + PPE G T ++ +SFG +L ++ S ++P PS + ++
Sbjct: 215 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-----NQEV 269
Query: 198 LLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLL 257
L + S + + R+ ++C Q + +RPN I L ++ + P +
Sbjct: 270 LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN---FAIILERIEYCTQDPDVINT 326
Query: 258 GIQHETAP 265
+ E P
Sbjct: 327 ALPIEYGP 334
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 68/172 (39%), Gaps = 4/172 (2%)
Query: 13 FHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72
+ C GE + L E + + + S + +L D LV M L
Sbjct: 212 YACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDL 271
Query: 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSF 132
H++H A + A + LE + R +Y DL IL D G+ R+S
Sbjct: 272 KFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE-RIVYRDLKPENILLDDHGHIRISDL 330
Query: 133 GLMKNSRDG---KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGK 181
GL + +G K + + PE ++ R T ++ G +L ++++G+
Sbjct: 331 GLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 17/216 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ--PMKWAMRL 90
L EA +G + L G ++ ++V E+M N +L L + Q ++ L
Sbjct: 65 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 124
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTN- 147
R +A ++Y S G ++ DL A IL + + ++S FGL + D +Y+T
Sbjct: 125 R---GIASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 180
Query: 148 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 203
+ +T PE + + T S V+S+G +L +++S P + +++ + +D
Sbjct: 181 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVDE 236
Query: 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
D L +L C Q + RP + +V
Sbjct: 237 GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 272
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 68/172 (39%), Gaps = 4/172 (2%)
Query: 13 FHCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL 72
+ C GE + L E + + + S + +L D LV M L
Sbjct: 212 YACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDL 271
Query: 73 AKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSF 132
H++H A + A + LE + R +Y DL IL D G+ R+S
Sbjct: 272 KFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE-RIVYRDLKPENILLDDHGHIRISDL 330
Query: 133 GLMKNSRDG---KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGK 181
GL + +G K + + PE ++ R T ++ G +L ++++G+
Sbjct: 331 GLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 87/217 (40%), Gaps = 21/217 (9%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE---TQPMKWAMR 89
L EA + + + IG ++ R ++ E M L L +QP AM
Sbjct: 81 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 140
Query: 90 --LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD------- 140
L VA +A +Y + ++ D+ A L G R++ G +RD
Sbjct: 141 DLLHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 199
Query: 141 --GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-PSHALDLIRSKNF 197
G + + PPE G T ++ +SFG +L ++ S ++P PS + ++
Sbjct: 200 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-----NQEV 254
Query: 198 LLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234
L + S + + R+ ++C Q + +RPN
Sbjct: 255 LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 291
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 102/235 (43%), Gaps = 37/235 (15%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRL-R 91
+E K +G + + + NL+G C + ++ E+ L ++L M+++ + R
Sbjct: 78 MEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 135
Query: 92 V-------------ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-- 136
V LA+ +EY +S+ + ++ DL A +L ++ +++ FGL +
Sbjct: 136 VPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLTARNVLVTENNVMKIADFGLARDI 194
Query: 137 NSRDGKSYSTN----LAFTPPEYMRTGRVTPESVVYSFGTMLLDL--LSGKHIPPSHALD 190
N+ D +TN + + PE + T +S V+SFG ++ ++ L G P +
Sbjct: 195 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 254
Query: 191 LIRSKNFLLLMDSALEGHFSNDEG---TELVRLASRCLQSEARERPNAKSLVISL 242
L F LL EGH + EL + C + +RP K LV L
Sbjct: 255 L-----FKLLK----EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 300
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 87/217 (40%), Gaps = 21/217 (9%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE---TQPMKWAMR 89
L EA + + + IG ++ R ++ E M L L +QP AM
Sbjct: 73 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 132
Query: 90 --LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD------- 140
L VA +A +Y + ++ D+ A L G R++ G +RD
Sbjct: 133 DLLHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 191
Query: 141 --GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-PSHALDLIRSKNF 197
G + + PPE G T ++ +SFG +L ++ S ++P PS + ++
Sbjct: 192 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-----NQEV 246
Query: 198 LLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234
L + S + + R+ ++C Q + +RPN
Sbjct: 247 LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 283
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 17/216 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ--PMKWAMRL 90
L EA +G + L G ++ ++V E+M N +L L + Q ++ L
Sbjct: 92 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 151
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTN- 147
R +A ++Y S G ++ DL A IL + + ++S FGL + D +Y+T
Sbjct: 152 R---GIASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 207
Query: 148 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 203
+ +T PE + + T S V+S+G +L +++S P + +++ + +D
Sbjct: 208 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVDE 263
Query: 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
D L +L C Q + RP + +V
Sbjct: 264 GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 299
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 17/216 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ--PMKWAMRL 90
L EA +G + L G ++ ++V E+M N +L L + Q ++ L
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTN- 147
R +A ++Y S G ++ DL A IL + + ++S FGL + D +Y+T
Sbjct: 154 R---GIASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 148 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 203
+ +T PE + + T S V+S+G +L +++S P + +++ + +D
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVDE 265
Query: 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
D L +L C Q + RP + +V
Sbjct: 266 GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 87/217 (40%), Gaps = 21/217 (9%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE---TQPMKWAMR 89
L EA + + + IG ++ R ++ E M L L +QP AM
Sbjct: 98 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 157
Query: 90 --LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD------- 140
L VA +A +Y + ++ D+ A L G R++ G +RD
Sbjct: 158 DLLHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 216
Query: 141 --GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-PSHALDLIRSKNF 197
G + + PPE G T ++ +SFG +L ++ S ++P PS + ++
Sbjct: 217 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-----NQEV 271
Query: 198 LLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234
L + S + + R+ ++C Q + +RPN
Sbjct: 272 LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 308
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 17/216 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ--PMKWAMRL 90
L EA +G + L G ++ ++V E+M N +L L + Q ++ L
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTN- 147
R +A ++Y S G ++ DL A IL + + ++S FGL + D +Y+T
Sbjct: 154 R---GIASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 148 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 203
+ +T PE + + T S V+S+G +L +++S P + +++ + +D
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVDE 265
Query: 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
D L +L C Q + RP + +V
Sbjct: 266 GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 97/248 (39%), Gaps = 24/248 (9%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE---TQPMKWAMR 89
L EA + + + IG ++ R ++ E M L L +QP AM
Sbjct: 82 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 141
Query: 90 --LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD------- 140
L VA +A +Y + ++ D+ A L G R++ G +RD
Sbjct: 142 DLLHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 200
Query: 141 --GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-PSHALDLIRSKNF 197
G + + PPE G T ++ +SFG +L ++ S ++P PS + ++
Sbjct: 201 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-----NQEV 255
Query: 198 LLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLL 257
L + S + + R+ ++C Q + +RPN I L ++ + P +
Sbjct: 256 LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN---FAIILERIEYCTQDPDVINT 312
Query: 258 GIQHETAP 265
+ E P
Sbjct: 313 ALPIEYGP 320
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/233 (18%), Positives = 102/233 (43%), Gaps = 11/233 (4%)
Query: 21 VLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE 80
+++ + E +EA+ + L +L G C + +V E++ N L +L
Sbjct: 39 MIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYL-RSH 97
Query: 81 TQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD 140
+ ++ + L + + + + + S + ++ DL A L D+D ++S FG+ + D
Sbjct: 98 GKGLEPSQLLEMCYDVCEGMAFLESH-QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD 156
Query: 141 GKSYST-----NLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSK 195
+ S+ + ++ PE + + +S V++FG ++ ++ S +P DL +
Sbjct: 157 DQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMP----YDLYTNS 212
Query: 196 NFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248
+L + + + + ++ C +RP + L+ S+ L+++
Sbjct: 213 EVVLKVSQGHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 17/216 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ--PMKWAMRL 90
L EA +G + L G ++ ++V E+M N +L L + Q ++ L
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTN- 147
R +A ++Y S G ++ DL A IL + + ++S FGL + D +Y+T
Sbjct: 154 R---GIASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 148 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 203
+ +T PE + + T S V+S+G +L +++S P + +++ + +D
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVDE 265
Query: 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
D L +L C Q + RP + +V
Sbjct: 266 GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 17/216 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ--PMKWAMRL 90
L EA +G + L G ++ ++V E+M N +L L + Q ++ L
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTN- 147
R +A ++Y S G ++ DL A IL + + ++S FGL + D +Y+T
Sbjct: 154 R---GIASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 148 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 203
+ +T PE + + T S V+S+G +L +++S P + +++ + +D
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVDE 265
Query: 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
D L +L C Q + RP + +V
Sbjct: 266 GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 87/217 (40%), Gaps = 21/217 (9%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE---TQPMKWAMR 89
L EA + + + IG ++ R ++ E M L L +QP AM
Sbjct: 99 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 158
Query: 90 --LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD------- 140
L VA +A +Y + ++ D+ A L G R++ G +RD
Sbjct: 159 DLLHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYY 217
Query: 141 --GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-PSHALDLIRSKNF 197
G + + PPE G T ++ +SFG +L ++ S ++P PS + ++
Sbjct: 218 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-----NQEV 272
Query: 198 LLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234
L + S + + R+ ++C Q + +RPN
Sbjct: 273 LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 309
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 87/217 (40%), Gaps = 21/217 (9%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE---TQPMKWAMR 89
L EA + + + IG ++ R ++ E M L L +QP AM
Sbjct: 122 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 181
Query: 90 --LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD------- 140
L VA +A +Y + ++ D+ A L G R++ G +RD
Sbjct: 182 DLLHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYY 240
Query: 141 --GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-PSHALDLIRSKNF 197
G + + PPE G T ++ +SFG +L ++ S ++P PS + ++
Sbjct: 241 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-----NQEV 295
Query: 198 LLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234
L + S + + R+ ++C Q + +RPN
Sbjct: 296 LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 332
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 17/216 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ--PMKWAMRL 90
L EA +G + L G ++ ++V E+M N +L L + Q ++ L
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTN- 147
R +A ++Y S G ++ DL A IL + + ++S FGL + D +Y+T
Sbjct: 154 R---GIASGMKYLSDMG-FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 148 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 203
+ +T PE + + T S V+S+G +L +++S P + +++ + +D
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVDE 265
Query: 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
D L +L C Q + RP + +V
Sbjct: 266 GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 87/217 (40%), Gaps = 21/217 (9%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE---TQPMKWAMR 89
L EA + + + IG ++ R ++ E M L L +QP AM
Sbjct: 88 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 147
Query: 90 --LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD------- 140
L VA +A +Y + ++ D+ A L G R++ G +RD
Sbjct: 148 DLLHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 206
Query: 141 --GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-PSHALDLIRSKNF 197
G + + PPE G T ++ +SFG +L ++ S ++P PS + ++
Sbjct: 207 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-----NQEV 261
Query: 198 LLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234
L + S + + R+ ++C Q + +RPN
Sbjct: 262 LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 298
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 87/217 (40%), Gaps = 21/217 (9%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE---TQPMKWAMR 89
L EA + + + IG ++ R ++ E M L L +QP AM
Sbjct: 96 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 155
Query: 90 --LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD------- 140
L VA +A +Y + ++ D+ A L G R++ G +RD
Sbjct: 156 DLLHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 214
Query: 141 --GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-PSHALDLIRSKNF 197
G + + PPE G T ++ +SFG +L ++ S ++P PS + ++
Sbjct: 215 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-----NQEV 269
Query: 198 LLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234
L + S + + R+ ++C Q + +RPN
Sbjct: 270 LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 306
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 17/216 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ--PMKWAMRL 90
L EA +G + L G ++ ++V E+M N +L L + Q ++ L
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTN- 147
R +A ++Y S G ++ DL A IL + + ++S FGL + D +Y+T
Sbjct: 154 R---GIASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRG 209
Query: 148 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 203
+ +T PE + + T S V+S+G +L +++S P + +++ + +D
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVDE 265
Query: 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
D L +L C Q + RP + +V
Sbjct: 266 GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 97/230 (42%), Gaps = 19/230 (8%)
Query: 14 HCHLKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLA 73
H + ++ + L EA + L+ ++L L + + ++ EFM +L
Sbjct: 39 HTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLL 97
Query: 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFG 133
L E + + +A+ + + + ++ DL A IL +++ FG
Sbjct: 98 DFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY-IHRDLRAANILVSASLVCKIADFG 156
Query: 134 LMK-------NSRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-P 185
L + +R+G + + +T PE + G T +S V+SFG +L+++++ IP P
Sbjct: 157 LARVIEDNEYTAREGAKFP--IKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYP 214
Query: 186 SHA-LDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234
+ ++IR+ ++ + EL + RC ++ ERP
Sbjct: 215 GMSNPEVIRA------LERGYRMPRPENCPEELYNIMMRCWKNRPEERPT 258
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 87/217 (40%), Gaps = 21/217 (9%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE---TQPMKWAMR 89
L EA + + + IG ++ R ++ E M L L +QP AM
Sbjct: 108 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 167
Query: 90 --LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD------- 140
L VA +A +Y + ++ D+ A L G R++ G +RD
Sbjct: 168 DLLHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 226
Query: 141 --GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-PSHALDLIRSKNF 197
G + + PPE G T ++ +SFG +L ++ S ++P PS + ++
Sbjct: 227 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-----NQEV 281
Query: 198 LLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234
L + S + + R+ ++C Q + +RPN
Sbjct: 282 LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 318
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 102/235 (43%), Gaps = 37/235 (15%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRL-R 91
+E K +G + + + NL+G C + ++ E+ L ++L M+++ + R
Sbjct: 91 MEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 92 V-------------ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-- 136
V LA+ +EY +S+ + ++ DL A +L ++ +++ FGL +
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 137 NSRDGKSYSTN----LAFTPPEYMRTGRVTPESVVYSFGTMLLDL--LSGKHIPPSHALD 190
N+ D +TN + + PE + T +S V+SFG ++ ++ L G P +
Sbjct: 208 NNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 191 LIRSKNFLLLMDSALEGHFSNDEG---TELVRLASRCLQSEARERPNAKSLVISL 242
L F LL EGH + EL + C + +RP K LV L
Sbjct: 268 L-----FKLLK----EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 104/244 (42%), Gaps = 24/244 (9%)
Query: 5 CSKFSICW---FHCHLKSSV--LESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADE 59
+F W ++ H K +V ++ + L EA + L+ ++L L + +
Sbjct: 198 AGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EP 256
Query: 60 RLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRI 119
++ EFM +L L E + + +A+ + + + ++ DL A I
Sbjct: 257 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN-YIHRDLRAANI 315
Query: 120 LFDKDGNPRLSSFGLMK-------NSRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGT 172
L +++ FGL + +R+G + + +T PE + G T +S V+SFG
Sbjct: 316 LVSASLVCKIADFGLARVIEDNEYTAREGAKFP--IKWTAPEAINFGSFTIKSDVWSFGI 373
Query: 173 MLLDLLSGKHIP-PSHA-LDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEAR 230
+L+++++ IP P + ++IR+ ++ + EL + RC ++
Sbjct: 374 LLMEIVTYGRIPYPGMSNPEVIRA------LERGYRMPRPENCPEELYNIMMRCWKNRPE 427
Query: 231 ERPN 234
ERP
Sbjct: 428 ERPT 431
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 102/235 (43%), Gaps = 37/235 (15%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRL-R 91
+E K +G + + + NL+G C + ++ E+ L ++L M+++ + R
Sbjct: 91 MEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 92 V-------------ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-- 136
V LA+ +EY +S+ + ++ DL A +L ++ +++ FGL +
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 137 NSRDGKSYSTN----LAFTPPEYMRTGRVTPESVVYSFGTMLLDL--LSGKHIPPSHALD 190
N+ D +TN + + PE + T +S V+SFG ++ ++ L G P +
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 191 LIRSKNFLLLMDSALEGHFSNDEG---TELVRLASRCLQSEARERPNAKSLVISL 242
L F LL EGH + EL + C + +RP K LV L
Sbjct: 268 L-----FKLLK----EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 102/235 (43%), Gaps = 37/235 (15%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRL-R 91
+E K +G + + + NL+G C + ++ E+ L ++L M+++ + R
Sbjct: 83 MEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 140
Query: 92 V-------------ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-- 136
V LA+ +EY +S+ + ++ DL A +L ++ +++ FGL +
Sbjct: 141 VPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDI 199
Query: 137 NSRDGKSYSTN----LAFTPPEYMRTGRVTPESVVYSFGTMLLDL--LSGKHIPPSHALD 190
N+ D +TN + + PE + T +S V+SFG ++ ++ L G P +
Sbjct: 200 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 259
Query: 191 LIRSKNFLLLMDSALEGHFSNDEG---TELVRLASRCLQSEARERPNAKSLVISL 242
L F LL EGH + EL + C + +RP K LV L
Sbjct: 260 L-----FKLLK----EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 305
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 102/235 (43%), Gaps = 37/235 (15%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRL-R 91
+E K +G + + + NL+G C + ++ E+ L ++L M+++ + R
Sbjct: 80 MEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 137
Query: 92 V-------------ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-- 136
V LA+ +EY +S+ + ++ DL A +L ++ +++ FGL +
Sbjct: 138 VPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDI 196
Query: 137 NSRDGKSYSTN----LAFTPPEYMRTGRVTPESVVYSFGTMLLDL--LSGKHIPPSHALD 190
N+ D +TN + + PE + T +S V+SFG ++ ++ L G P +
Sbjct: 197 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 256
Query: 191 LIRSKNFLLLMDSALEGHFSNDEG---TELVRLASRCLQSEARERPNAKSLVISL 242
L F LL EGH + EL + C + +RP K LV L
Sbjct: 257 L-----FKLLK----EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 302
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 67/156 (42%), Gaps = 15/156 (9%)
Query: 98 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL---------MKNSRDGKSYSTNL 148
+ LEY G+ ++ D+ A IL +DG+ +++ FG+ + ++ K++
Sbjct: 127 EGLEYLHKNGQ-IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 185
Query: 149 AFTPPEYMRTGR-VTPESVVYSFGTMLLDLLSG----KHIPPSHALDLIRSKNFLLLMDS 203
+ PE M R ++ ++SFG ++L +G PP L L + L
Sbjct: 186 CWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETG 245
Query: 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
+ G ++ S CLQ + +RP A L+
Sbjct: 246 VQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 281
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 67/156 (42%), Gaps = 15/156 (9%)
Query: 98 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL---------MKNSRDGKSYSTNL 148
+ LEY G+ ++ D+ A IL +DG+ +++ FG+ + ++ K++
Sbjct: 132 EGLEYLHKNGQ-IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 190
Query: 149 AFTPPEYMRTGR-VTPESVVYSFGTMLLDLLSG----KHIPPSHALDLIRSKNFLLLMDS 203
+ PE M R ++ ++SFG ++L +G PP L L + L
Sbjct: 191 CWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETG 250
Query: 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
+ G ++ S CLQ + +RP A L+
Sbjct: 251 VQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 286
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 102/235 (43%), Gaps = 37/235 (15%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRL-R 91
+E K +G + + + NL+G C + ++ E+ L ++L M+++ + R
Sbjct: 137 MEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 194
Query: 92 V-------------ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-- 136
V LA+ +EY +S+ + ++ DL A +L ++ +++ FGL +
Sbjct: 195 VPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDI 253
Query: 137 NSRDGKSYSTN----LAFTPPEYMRTGRVTPESVVYSFGTMLLDL--LSGKHIPPSHALD 190
N+ D +TN + + PE + T +S V+SFG ++ ++ L G P +
Sbjct: 254 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 313
Query: 191 LIRSKNFLLLMDSALEGHFSNDEG---TELVRLASRCLQSEARERPNAKSLVISL 242
L F LL EGH + EL + C + +RP K LV L
Sbjct: 314 L-----FKLLK----EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 359
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 106/259 (40%), Gaps = 28/259 (10%)
Query: 20 SVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78
+V ES+ L E + L EA + + L+G + L+V E M + L +L
Sbjct: 54 TVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS 113
Query: 79 WETQ--------PMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130
+ P +++A +A + Y ++K + ++ DL A + D ++
Sbjct: 114 LRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIG 172
Query: 131 SFGLMKN------SRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
FG+ ++ R G + + PE ++ G T S ++SFG +L ++ S P
Sbjct: 173 DFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP 232
Query: 185 PSHALDLIRSKNFLLLMDSALEGHFSN--DEGTELVRLASRCLQSEARERPNAKSLVISL 242
L + +MD N + T+L+R+ C Q PN + + +
Sbjct: 233 YQ---GLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRM---CWQF----NPNMRPTFLEI 282
Query: 243 MSLQKEAEVPSYVLLGIQH 261
++L K+ PS+ + H
Sbjct: 283 VNLLKDDLHPSFPEVSFFH 301
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 102/237 (43%), Gaps = 20/237 (8%)
Query: 5 CSKFSICW---FHCHLKSSV--LESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADE 59
+F W ++ H K +V ++ + L EA + L+ ++L L + +
Sbjct: 192 AGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EP 250
Query: 60 RLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRI 119
++ EFM +L L E + + +A+ + + + ++ DL A I
Sbjct: 251 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN-YIHRDLRAANI 309
Query: 120 LFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS 179
L +++ FGL +R G + + +T PE + G T +S V+SFG +L+++++
Sbjct: 310 LVSASLVCKIADFGL---ARVGAKFP--IKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 364
Query: 180 GKHIP-PSHA-LDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234
IP P + ++IR+ ++ + EL + RC ++ ERP
Sbjct: 365 YGRIPYPGMSNPEVIRA------LERGYRMPRPENCPEELYNIMMRCWKNRPEERPT 415
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 106/259 (40%), Gaps = 28/259 (10%)
Query: 20 SVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78
+V ES+ L E + L EA + + L+G + L+V E M + L +L
Sbjct: 54 TVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS 113
Query: 79 WETQ--------PMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130
+ P +++A +A + Y ++K + ++ DL A + D ++
Sbjct: 114 LRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIG 172
Query: 131 SFGLMKN------SRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
FG+ ++ R G + + PE ++ G T S ++SFG +L ++ S P
Sbjct: 173 DFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP 232
Query: 185 PSHALDLIRSKNFLLLMDSALEGHFSN--DEGTELVRLASRCLQSEARERPNAKSLVISL 242
L + +MD N + T+L+R+ C Q + RP + +
Sbjct: 233 YQ---GLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRM---CWQFNPKMRPT----FLEI 282
Query: 243 MSLQKEAEVPSYVLLGIQH 261
++L K+ PS+ + H
Sbjct: 283 VNLLKDDLHPSFPEVSFFH 301
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 100/235 (42%), Gaps = 37/235 (15%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL-----------FHWET 81
+E K +G + + + NL+G C + ++ E+ L ++L +
Sbjct: 91 MEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINR 148
Query: 82 QP---MKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-- 136
P M + + LA+ +EY +S+ + ++ DL A +L ++ +++ FGL +
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 137 NSRDGKSYSTN----LAFTPPEYMRTGRVTPESVVYSFGTMLLDL--LSGKHIPPSHALD 190
N+ D +TN + + PE + T +S V+SFG ++ ++ L G P +
Sbjct: 208 NNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 191 LIRSKNFLLLMDSALEGHFSNDEG---TELVRLASRCLQSEARERPNAKSLVISL 242
L F LL EGH + EL + C + +RP K LV L
Sbjct: 268 L-----FKLLK----EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 106/259 (40%), Gaps = 28/259 (10%)
Query: 20 SVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78
+V ES+ L E + L EA + + L+G + L+V E M + L +L
Sbjct: 51 TVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS 110
Query: 79 WETQ--------PMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130
+ P +++A +A + Y ++K + ++ DL A + D ++
Sbjct: 111 LRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIG 169
Query: 131 SFGLMKN------SRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
FG+ ++ R G + + PE ++ G T S ++SFG +L ++ S P
Sbjct: 170 DFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP 229
Query: 185 PSHALDLIRSKNFLLLMDSALEGHFSN--DEGTELVRLASRCLQSEARERPNAKSLVISL 242
L + +MD N + T+L+R+ C Q + RP + +
Sbjct: 230 YQ---GLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRM---CWQFNPKMRPT----FLEI 279
Query: 243 MSLQKEAEVPSYVLLGIQH 261
++L K+ PS+ + H
Sbjct: 280 VNLLKDDLHPSFPEVSFFH 298
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 89/217 (41%), Gaps = 21/217 (9%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWE---TQPMKWAMR 89
L EA + + + IG ++ R ++ E M L L +QP AM
Sbjct: 82 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 141
Query: 90 --LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSS---FGLMKN------S 138
L VA +A +Y + ++ D+ A L G R++ FG+ ++
Sbjct: 142 DLLHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYY 200
Query: 139 RDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-PSHALDLIRSKNF 197
R G + + PPE G T ++ +SFG +L ++ S ++P PS + ++
Sbjct: 201 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-----NQEV 255
Query: 198 LLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 234
L + S + + R+ ++C Q + +RPN
Sbjct: 256 LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 292
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 93/216 (43%), Gaps = 17/216 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ--PMKWAMRL 90
L EA +G + L G ++ ++V E M N +L L + Q ++ L
Sbjct: 65 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGML 124
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTN- 147
R +A ++Y S G ++ DL A IL + + ++S FGL + D +Y+T
Sbjct: 125 R---GIASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 180
Query: 148 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 203
+ +T PE + + T S V+S+G +L +++S P + +++ + +D
Sbjct: 181 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVDE 236
Query: 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
D L +L C Q + RP + +V
Sbjct: 237 GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 272
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 106/259 (40%), Gaps = 28/259 (10%)
Query: 20 SVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78
+V ES+ L E + L EA + + L+G + L+V E M + L +L
Sbjct: 53 TVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS 112
Query: 79 WETQ--------PMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130
+ P +++A +A + Y ++K + ++ DL A + D ++
Sbjct: 113 LRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIG 171
Query: 131 SFGLMKN------SRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
FG+ ++ R G + + PE ++ G T S ++SFG +L ++ S P
Sbjct: 172 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP 231
Query: 185 PSHALDLIRSKNFLLLMDSALEGHFSN--DEGTELVRLASRCLQSEARERPNAKSLVISL 242
L + +MD N + T+L+R+ C Q + RP + +
Sbjct: 232 YQ---GLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRM---CWQFNPKMRPT----FLEI 281
Query: 243 MSLQKEAEVPSYVLLGIQH 261
++L K+ PS+ + H
Sbjct: 282 VNLLKDDLHPSFPEVSFFH 300
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 93/216 (43%), Gaps = 17/216 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ--PMKWAMRL 90
L EA +G + L G ++ ++V E M N +L L + Q ++ L
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTN- 147
R +A ++Y S G ++ DL A IL + + ++S FGL + D +Y+T
Sbjct: 154 R---GIASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 148 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 203
+ +T PE + + T S V+S+G +L +++S P + +++ + +D
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVDE 265
Query: 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
D L +L C Q + RP + +V
Sbjct: 266 GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 106/259 (40%), Gaps = 28/259 (10%)
Query: 20 SVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78
+V ES+ L E + L EA + + L+G + L+V E M + L +L
Sbjct: 54 TVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS 113
Query: 79 WETQ--------PMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130
+ P +++A +A + Y ++K + ++ DL A + D ++
Sbjct: 114 LRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIG 172
Query: 131 SFGLMKN------SRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
FG+ ++ R G + + PE ++ G T S ++SFG +L ++ S P
Sbjct: 173 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP 232
Query: 185 PSHALDLIRSKNFLLLMDSALEGHFSN--DEGTELVRLASRCLQSEARERPNAKSLVISL 242
L + +MD N + T+L+R+ C Q + RP + +
Sbjct: 233 YQ---GLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRM---CWQFNPKMRPT----FLEI 282
Query: 243 MSLQKEAEVPSYVLLGIQH 261
++L K+ PS+ + H
Sbjct: 283 VNLLKDDLHPSFPEVSFFH 301
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 106/259 (40%), Gaps = 28/259 (10%)
Query: 20 SVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78
+V ES+ L E + L EA + + L+G + L+V E M + L +L
Sbjct: 54 TVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS 113
Query: 79 WETQ--------PMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130
+ P +++A +A + Y ++K + ++ DL A + D ++
Sbjct: 114 LRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIG 172
Query: 131 SFGLMKN------SRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
FG+ ++ R G + + PE ++ G T S ++SFG +L ++ S P
Sbjct: 173 DFGMTRDIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP 232
Query: 185 PSHALDLIRSKNFLLLMDSALEGHFSN--DEGTELVRLASRCLQSEARERPNAKSLVISL 242
L + +MD N + T+L+R+ C Q + RP + +
Sbjct: 233 YQ---GLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRM---CWQFNPKMRPT----FLEI 282
Query: 243 MSLQKEAEVPSYVLLGIQH 261
++L K+ PS+ + H
Sbjct: 283 VNLLKDDLHPSFPEVSFFH 301
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 10/131 (7%)
Query: 99 ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PE 154
ALEY SK +Y DL IL DK+G+ +++ FG K D + L TP PE
Sbjct: 118 ALEYLHSKD-IIYRDLKPENILLDKNGHIKITDFGFAKYVPD---VTYXLCGTPDYIAPE 173
Query: 155 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEG 214
+ T +SFG ++ ++L+G P + + +++ +L + F+ D
Sbjct: 174 VVSTKPYNKSIDWWSFGILIYEMLAG--YTPFYDSNTMKTYEKILNAELRFPPFFNEDVK 231
Query: 215 TELVRLASRCL 225
L RL +R L
Sbjct: 232 DLLSRLITRDL 242
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 12/145 (8%)
Query: 57 ADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNA 116
DE +V EF+ L + H + A V L + +AL Y ++G ++ D+ +
Sbjct: 114 GDELWVVMEFLEGGALTDIVTHTRMNEEQIAT---VCLSVLRALSYLHNQG-VIHRDIKS 169
Query: 117 YRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPESVVYSFGT 172
IL DG +LS FG L TP PE + E ++S G
Sbjct: 170 DSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGI 229
Query: 173 MLLDLLSGK----HIPPSHALDLIR 193
M+++++ G+ + PP A+ IR
Sbjct: 230 MVIEMIDGEPPYFNEPPLQAMRRIR 254
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 74/176 (42%), Gaps = 11/176 (6%)
Query: 12 WFHCHLKSSVLESSDL-GETLN--LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMP 68
W + +L D E +N L E + LR + +G + +V E++
Sbjct: 58 WHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLS 117
Query: 69 NETLAKHLFHWE--TQPMKWAMRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDG 125
+L + L H + + RL +A +A+ + Y ++ + H DL + +L DK
Sbjct: 118 RGSLYR-LLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKY 176
Query: 126 NPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPESVVYSFGTMLLDL 177
++ FGL + S A TP PE +R +S VYSFG +L +L
Sbjct: 177 TVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWEL 232
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 75/169 (44%), Gaps = 15/169 (8%)
Query: 17 LKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76
+ VL SD+ + E + LR + L DE ++V E+ NE L
Sbjct: 37 INKKVLAKSDMQGRIE-REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE-----L 90
Query: 77 FHWETQPMKWAMR--LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL 134
F + Q K + + R + A+EYC + + ++ DL +L D+ N +++ FGL
Sbjct: 91 FDYIVQRDKMSEQEARRFFQQIISAVEYCH-RHKIVHRDLKPENLLLDEHLNVKIADFGL 149
Query: 135 MKNSRDGKSYSTNLA---FTPPEYMRTGRVT--PESVVYSFGTMLLDLL 178
DG T+ + PE + +G++ PE V+S G +L +L
Sbjct: 150 SNIMTDGNFLKTSCGSPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVML 197
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 91/214 (42%), Gaps = 17/214 (7%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ--PMKWAMRLRV 92
EA +G + +L G ++V EFM N L L + Q ++ LR
Sbjct: 94 EASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLR- 152
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS--YSTN--- 147
+A + Y + G ++ DL A IL + + ++S FGL + D Y+T
Sbjct: 153 --GIAAGMRYLADMG-YVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGK 209
Query: 148 --LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSAL 205
+ +T PE ++ + T S V+S+G ++ +++S P + +++ + ++
Sbjct: 210 IPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD----MSNQDVIKAIEEGY 265
Query: 206 EGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
D L +L C Q E ERP + +V
Sbjct: 266 RLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIV 299
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 75/169 (44%), Gaps = 15/169 (8%)
Query: 17 LKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76
+ VL SD+ + E + LR + L DE ++V E+ NE L
Sbjct: 46 INKKVLAKSDMQGRIE-REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE-----L 99
Query: 77 FHWETQPMKWAMR--LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL 134
F + Q K + + R + A+EYC + + ++ DL +L D+ N +++ FGL
Sbjct: 100 FDYIVQRDKMSEQEARRFFQQIISAVEYCH-RHKIVHRDLKPENLLLDEHLNVKIADFGL 158
Query: 135 MKNSRDGKSYSTNLA---FTPPEYMRTGRVT--PESVVYSFGTMLLDLL 178
DG T+ + PE + +G++ PE V+S G +L +L
Sbjct: 159 SNIMTDGNFLKTSCGSPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVML 206
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 75/169 (44%), Gaps = 15/169 (8%)
Query: 17 LKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76
+ VL SD+ + E + LR + L DE ++V E+ NE L
Sbjct: 41 INKKVLAKSDMQGRIE-REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE-----L 94
Query: 77 FHWETQPMKWAMR--LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL 134
F + Q K + + R + A+EYC + + ++ DL +L D+ N +++ FGL
Sbjct: 95 FDYIVQRDKMSEQEARRFFQQIISAVEYCH-RHKIVHRDLKPENLLLDEHLNVKIADFGL 153
Query: 135 MKNSRDGKSYSTNLA---FTPPEYMRTGRVT--PESVVYSFGTMLLDLL 178
DG T+ + PE + +G++ PE V+S G +L +L
Sbjct: 154 SNIMTDGNFLKTSCGSPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVML 201
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 75/169 (44%), Gaps = 15/169 (8%)
Query: 17 LKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76
+ VL SD+ + E + LR + L DE ++V E+ NE L
Sbjct: 47 INKKVLAKSDMQGRIE-REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE-----L 100
Query: 77 FHWETQPMKWAMR--LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL 134
F + Q K + + R + A+EYC + + ++ DL +L D+ N +++ FGL
Sbjct: 101 FDYIVQRDKMSEQEARRFFQQIISAVEYCH-RHKIVHRDLKPENLLLDEHLNVKIADFGL 159
Query: 135 MKNSRDGKSYSTNLA---FTPPEYMRTGRVT--PESVVYSFGTMLLDLL 178
DG T+ + PE + +G++ PE V+S G +L +L
Sbjct: 160 SNIMTDGNFLKTSCGSPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVML 207
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 12/142 (8%)
Query: 96 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNS-RDG---KSYSTNLAFT 151
+ AL+Y S+ +Y DL ++ DKDG+ +++ FGL K +DG K++ +
Sbjct: 257 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYL 316
Query: 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNF-LLLMDSALEGHFS 210
PE + + G ++ +++ G+ P + D K F L+LM+ E F
Sbjct: 317 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQD--HEKLFELILME---EIRFP 369
Query: 211 NDEGTELVRLASRCLQSEARER 232
G E L S L+ + ++R
Sbjct: 370 RTLGPEAKSLLSGLLKKDPKQR 391
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Query: 96 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP--- 152
+ A++YC K R ++ DL A +L D D N +++ FG G T P
Sbjct: 120 IVSAVQYCHQK-RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAA 178
Query: 153 PEYMRTGRVT-PESVVYSFGTMLLDLLSG 180
PE + + PE V+S G +L L+SG
Sbjct: 179 PELFQGKKYDGPEVDVWSLGVILYTLVSG 207
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 12/142 (8%)
Query: 96 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNS-RDG---KSYSTNLAFT 151
+ AL+Y S+ +Y DL ++ DKDG+ +++ FGL K +DG K++ +
Sbjct: 260 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYL 319
Query: 152 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNF-LLLMDSALEGHFS 210
PE + + G ++ +++ G+ P + D K F L+LM+ E F
Sbjct: 320 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQD--HEKLFELILME---EIRFP 372
Query: 211 NDEGTELVRLASRCLQSEARER 232
G E L S L+ + ++R
Sbjct: 373 RTLGPEAKSLLSGLLKKDPKQR 394
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 14/138 (10%)
Query: 53 CCYEADERL-LVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALY 111
C ++ D+ L +V E+MP L + +++ P KWA + LA L+ S G ++
Sbjct: 142 CAFQDDKYLYMVMEYMPGGDLVNLMSNYDV-PEKWAKFYTAEVVLA--LDAIHSMG-LIH 197
Query: 112 HDLNAYRILFDKDGNPRLSSFGL-MKNSRDGKSYSTNLAFTP----PEYMRT----GRVT 162
D+ +L DK G+ +L+ FG MK G + TP PE +++ G
Sbjct: 198 RDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYG 257
Query: 163 PESVVYSFGTMLLDLLSG 180
E +S G L ++L G
Sbjct: 258 RECDWWSVGVFLFEMLVG 275
>pdb|1A17|A Chain A, Tetratricopeptide Repeats Of Protein Phosphatase 5
Length = 166
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 322 KKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPT---VYARRCLSYLMNDMPQEALGDAMQ 378
K + F+AKD+ AI Y+Q I+ ++P+ Y R L+YL + ALGDA +
Sbjct: 17 KTQANDYFKAKDYENAIKFYSQAIE----LNPSNAIYYGNRSLAYLRTECYGYALGDATR 72
Query: 379 AQVVSPDWPTALYLQAACLFSLG 401
A + + Y +AA +LG
Sbjct: 73 AIELDKKYIKGYYRRAASNMALG 95
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 106/259 (40%), Gaps = 28/259 (10%)
Query: 20 SVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78
+V ES+ L E + L EA + + L+G + L+V E M + L +L
Sbjct: 55 TVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS 114
Query: 79 WETQ--------PMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130
+ P +++A +A + Y ++K + ++ +L A + D ++
Sbjct: 115 LRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK-KFVHRNLAARNCMVAHDFTVKIG 173
Query: 131 SFGLMKNSRDGKSYSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
FG+ ++ + Y + + PE ++ G T S ++SFG +L ++ S P
Sbjct: 174 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP 233
Query: 185 PSHALDLIRSKNFLLLMDSALEGHFSN--DEGTELVRLASRCLQSEARERPNAKSLVISL 242
L + +MD N + T+L+R+ C Q PN + + +
Sbjct: 234 YQ---GLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRM---CWQF----NPNMRPTFLEI 283
Query: 243 MSLQKEAEVPSYVLLGIQH 261
++L K+ PS+ + H
Sbjct: 284 VNLLKDDLHPSFPEVSFFH 302
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 106/259 (40%), Gaps = 28/259 (10%)
Query: 20 SVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78
+V ES+ L E + L EA + + L+G + L+V E M + L +L
Sbjct: 54 TVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS 113
Query: 79 WETQ--------PMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130
+ P +++A +A + Y ++K + ++ +L A + D ++
Sbjct: 114 LRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK-KFVHRNLAARNCMVAHDFTVKIG 172
Query: 131 SFGLMKNSRDGKSYSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
FG+ ++ + Y + + PE ++ G T S ++SFG +L ++ S P
Sbjct: 173 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP 232
Query: 185 PSHALDLIRSKNFLLLMDSALEGHFSN--DEGTELVRLASRCLQSEARERPNAKSLVISL 242
L + +MD N + T+L+R+ C Q PN + + +
Sbjct: 233 YQ---GLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRM---CWQF----NPNMRPTFLEI 282
Query: 243 MSLQKEAEVPSYVLLGIQH 261
++L K+ PS+ + H
Sbjct: 283 VNLLKDDLHPSFPEVSFFH 301
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 8/96 (8%)
Query: 92 VALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD--GKSYS- 145
V YLA+ L++ S G +Y DL IL D++G+ +L+ FGL K + D K+YS
Sbjct: 132 VKFYLAELALGLDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSF 190
Query: 146 -TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSG 180
+ + PE + + + +S+G ++ ++L+G
Sbjct: 191 CGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|1WAO|1 Chain 1, Pp5 Structure
pdb|1WAO|2 Chain 2, Pp5 Structure
pdb|1WAO|3 Chain 3, Pp5 Structure
pdb|1WAO|4 Chain 4, Pp5 Structure
Length = 477
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 322 KKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPT---VYARRCLSYLMNDMPQEALGDAMQ 378
K + F+AKD+ AI Y+Q I+ ++P+ Y R L+YL + ALGDA +
Sbjct: 10 KTQANDYFKAKDYENAIKFYSQAIE----LNPSNAIYYGNRSLAYLRTECYGYALGDATR 65
Query: 379 AQVVSPDWPTALYLQAACLFSLG 401
A + + Y +AA +LG
Sbjct: 66 AIELDKKYIKGYYRRAASNMALG 88
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 83/215 (38%), Gaps = 12/215 (5%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+ EA + NL + LIG E + ++ E P L H +K +
Sbjct: 73 MSEAVIMKNLDHPHIVKLIGII-EEEPTWIIMELYPYGELG-HYLERNKNSLKVLTLVLY 130
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
+L + +A+ Y S ++ D+ IL +L FGL + D Y ++ P
Sbjct: 131 SLQICKAMAYLESIN-CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP 189
Query: 153 -----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEG 207
PE + R T S V+ F + ++LS P + +K+ + +++
Sbjct: 190 IKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP----FFWLENKDVIGVLEKGDRL 245
Query: 208 HFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242
+ L L +RC + +RP LV SL
Sbjct: 246 PKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSL 280
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 83/215 (38%), Gaps = 12/215 (5%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+ EA + NL + LIG E + ++ E P L H +K +
Sbjct: 61 MSEAVIMKNLDHPHIVKLIGII-EEEPTWIIMELYPYGELG-HYLERNKNSLKVLTLVLY 118
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
+L + +A+ Y S ++ D+ IL +L FGL + D Y ++ P
Sbjct: 119 SLQICKAMAYLESIN-CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP 177
Query: 153 -----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEG 207
PE + R T S V+ F + ++LS P + +K+ + +++
Sbjct: 178 IKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP----FFWLENKDVIGVLEKGDRL 233
Query: 208 HFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242
+ L L +RC + +RP LV SL
Sbjct: 234 PKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSL 268
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 92/223 (41%), Gaps = 19/223 (8%)
Query: 17 LKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75
LK V+ + D + TL E + + N R L L D V E+ L
Sbjct: 42 LKKEVIVAKDEVAHTLT--ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL--- 96
Query: 76 LFHWETQPMKWAMRLRV-ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL 134
FH + + R R + AL+Y S+ +Y DL ++ DKDG+ +++ FGL
Sbjct: 97 FFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL 156
Query: 135 MKNS-RDG---KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALD 190
K +DG K + + PE + + G ++ +++ G+ P + D
Sbjct: 157 CKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQD 214
Query: 191 LIRSKNF-LLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232
K F L+LM+ E F G E L S L+ + ++R
Sbjct: 215 --HEKLFELILME---EIRFPRTLGPEAKSLLSGLLKKDPKQR 252
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 67/158 (42%), Gaps = 14/158 (8%)
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAF 150
++A+ + +ALE+ SK ++ D+ +L + G ++ FG+ D + + +
Sbjct: 157 KIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGC 216
Query: 151 TPPEYMRTGRVTPE---------SVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM 201
P YM R+ PE S ++S G +++L + S + K +
Sbjct: 217 KP--YMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEP 274
Query: 202 DSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
L ++ E V S+CL+ ++ERP L+
Sbjct: 275 SPQLP---ADKFSAEFVDFTSQCLKKNSKERPTYPELM 309
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 92/223 (41%), Gaps = 19/223 (8%)
Query: 17 LKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75
LK V+ + D + TL E + + N R L L D V E+ L
Sbjct: 43 LKKEVIVAKDEVAHTLT--ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL--- 97
Query: 76 LFHWETQPMKWAMRLRV-ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL 134
FH + + R R + AL+Y S+ +Y DL ++ DKDG+ +++ FGL
Sbjct: 98 FFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL 157
Query: 135 MKNS-RDG---KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALD 190
K +DG K + + PE + + G ++ +++ G+ P + D
Sbjct: 158 CKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL--PFYNQD 215
Query: 191 LIRSKNF-LLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232
K F L+LM+ E F G E L S L+ + ++R
Sbjct: 216 --HEKLFELILME---EIRFPRTLGPEAKSLLSGLLKKDPKQR 253
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 92/223 (41%), Gaps = 19/223 (8%)
Query: 17 LKSSVLESSD-LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75
LK V+ + D + TL E + + N R L L D V E+ L
Sbjct: 41 LKKEVIVAKDEVAHTLT--ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL--- 95
Query: 76 LFHWETQPMKWAMRLRV-ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL 134
FH + + R R + AL+Y S+ +Y DL ++ DKDG+ +++ FGL
Sbjct: 96 FFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL 155
Query: 135 MKNS-RDG---KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALD 190
K +DG K + + PE + + G ++ +++ G+ P + D
Sbjct: 156 CKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQD 213
Query: 191 LIRSKNF-LLLMDSALEGHFSNDEGTELVRLASRCLQSEARER 232
K F L+LM+ E F G E L S L+ + ++R
Sbjct: 214 --HEKLFELILME---EIRFPRTLGPEAKSLLSGLLKKDPKQR 251
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 83/215 (38%), Gaps = 12/215 (5%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
+ EA + NL + LIG E + ++ E P L H +K +
Sbjct: 57 MSEAVIMKNLDHPHIVKLIGII-EEEPTWIIMELYPYGELG-HYLERNKNSLKVLTLVLY 114
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 152
+L + +A+ Y S ++ D+ IL +L FGL + D Y ++ P
Sbjct: 115 SLQICKAMAYLESIN-CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP 173
Query: 153 -----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEG 207
PE + R T S V+ F + ++LS P + +K+ + +++
Sbjct: 174 IKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP----FFWLENKDVIGVLEKGDRL 229
Query: 208 HFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 242
+ L L +RC + +RP LV SL
Sbjct: 230 PKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSL 264
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 11/176 (6%)
Query: 12 WFHCHLKSSVLESSDL-GETLN--LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMP 68
W + +L D E +N L E + LR + +G + +V E++
Sbjct: 58 WHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLS 117
Query: 69 NETLAKHLFHWE--TQPMKWAMRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDG 125
+L + L H + + RL +A +A+ + Y ++ + H +L + +L DK
Sbjct: 118 RGSLYR-LLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKY 176
Query: 126 NPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPESVVYSFGTMLLDL 177
++ FGL + S + A TP PE +R +S VYSFG +L +L
Sbjct: 177 TVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWEL 232
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 95/218 (43%), Gaps = 21/218 (9%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ--PMKWAMRL 90
L EA +G + +L G ++ ++V E+M N +L L + Q ++ L
Sbjct: 71 LGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGML 130
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK--SYSTN- 147
R ++ ++Y S G ++ DL A IL + + ++S FGL + D +Y+T
Sbjct: 131 R---GISAGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 186
Query: 148 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHAL--DLIRSKNFLLLM 201
+ +T PE + + T S V+S+G ++ +++S P D+I++ +
Sbjct: 187 GKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRL 246
Query: 202 DSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
S + D L +L C Q E RP +V
Sbjct: 247 PSPM------DCPAALYQLMLDCWQKERNSRPKFDEIV 278
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 96 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTP 152
+ A++YC K R ++ DL A +L D D N +++ FG G ++ +
Sbjct: 123 IVSAVQYCHQK-RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAA 181
Query: 153 PEYMRTGRVT-PESVVYSFGTMLLDLLSG 180
PE + + PE V+S G +L L+SG
Sbjct: 182 PELFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 73/176 (41%), Gaps = 21/176 (11%)
Query: 17 LKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76
LK V+ D E +E+ + L L C D V E++ L H+
Sbjct: 374 LKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHI 433
Query: 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136
+ K + A +A L + SKG +Y DL ++ D +G+ +++ FG+ K
Sbjct: 434 --QQVGRFKEPHAVFYAAEIAIGLFFLQSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCK 490
Query: 137 -NSRDGKSYSTNLAFTPPEYMRTGRVTPESVVY----------SFGTMLLDLLSGK 181
N DG +T P+Y + PE + Y +FG +L ++L+G+
Sbjct: 491 ENIWDG--VTTKXFCGTPDY-----IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 102/234 (43%), Gaps = 19/234 (8%)
Query: 22 LESSD--LGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAK-HLFH 78
LES D + + + + E K + LR E L NL+ C + LV EF+ + L LF
Sbjct: 59 LESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELF- 117
Query: 79 WETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN- 137
+ + + + + + +C S ++ D+ IL + G +L FG +
Sbjct: 118 --PNGLDYQVVQKYLFQIINGIGFCHSHN-IIHRDIKPENILVSQSGVVKLCDFGFARTL 174
Query: 138 SRDGKSYSTNLA---FTPPEYMRTGRVTPESV-VYSFGTMLLDLLSGKHIPPSHALDLIR 193
+ G+ Y +A + PE + ++V V++ G ++ ++ G+ + P + D+ +
Sbjct: 175 AAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDS-DIDQ 233
Query: 194 SKNFLLLMDSALEGH---FSNDEGTELVRLASRCLQSEARER--PNAKSLVISL 242
+ ++ + + + H F+ + VRL + E ER P +VI L
Sbjct: 234 LYHIMMCLGNLIPRHQELFNKNPVFAGVRLPE-IKEREPLERRYPKLSEVVIDL 286
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 66/158 (41%), Gaps = 14/158 (8%)
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAF 150
++A+ + +ALE+ SK ++ D+ +L + G ++ FG+ D + +
Sbjct: 113 KIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGC 172
Query: 151 TPPEYMRTGRVTPE---------SVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM 201
P YM R+ PE S ++S G +++L + S + K +
Sbjct: 173 KP--YMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEP 230
Query: 202 DSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
L ++ E V S+CL+ ++ERP L+
Sbjct: 231 SPQLP---ADKFSAEFVDFTSQCLKKNSKERPTYPELM 265
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 73/176 (41%), Gaps = 21/176 (11%)
Query: 17 LKSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHL 76
LK V+ D E +E+ + L L C D V E++ L H+
Sbjct: 53 LKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHI 112
Query: 77 FHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136
+ K + A +A L + SKG +Y DL ++ D +G+ +++ FG+ K
Sbjct: 113 --QQVGRFKEPHAVFYAAEIAIGLFFLQSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCK 169
Query: 137 -NSRDGKSYSTNLAFTPPEYMRTGRVTPESVVY----------SFGTMLLDLLSGK 181
N DG +T P+Y + PE + Y +FG +L ++L+G+
Sbjct: 170 ENIWDG--VTTKXFCGTPDY-----IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ--PMKWAMRL 90
L EA +G + +L G ++ +++ EFM N +L L + Q ++ L
Sbjct: 82 LSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGML 141
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS---YSTN 147
R +A ++Y + ++ DL A IL + + ++S FGL + D S Y++
Sbjct: 142 R---GIAAGMKYLADMN-YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSA 197
Query: 148 LA------FTPPEYMRTGRVTPESVVYSFGTMLLDLLS 179
L +T PE ++ + T S V+S+G ++ +++S
Sbjct: 198 LGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 64/139 (46%), Gaps = 10/139 (7%)
Query: 50 LIG--CCYEADERLL-VAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSK 106
L+G C++ + RL V E++ L H+ P + A + LA L Y +
Sbjct: 115 LVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNYLHER 172
Query: 107 GRALYHDLNAYRILFDKDGNPRLSSFGLMKNS-RDGKSYSTNLA---FTPPEYMRTGRVT 162
G +Y DL +L D +G+ +L+ +G+ K R G + ST + PE +R
Sbjct: 173 G-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYG 231
Query: 163 PESVVYSFGTMLLDLLSGK 181
++ G ++ ++++G+
Sbjct: 232 FSVDWWALGVLMFEMMAGR 250
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 69/161 (42%), Gaps = 17/161 (10%)
Query: 96 LAQALEYCSSKGRALYHDLNAYRILFD-KDGNPRLSSFG--LMKNSRDGKSYSTNLAFTP 152
+ A+++C S+G ++ D+ IL D + G +L FG + + + ++P
Sbjct: 148 VVAAIQHCHSRG-VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSP 206
Query: 153 PEYM-RTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSN 211
PE++ R + V+S G +L D++ G IP +++ + E HF
Sbjct: 207 PEWISRHQYHALPATVWSLGILLYDMVCGD-IPFERDQEILEA-----------ELHFPA 254
Query: 212 DEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVP 252
+ L RCL + RP+ + +++ +VP
Sbjct: 255 HVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAEDVP 295
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 92/216 (42%), Gaps = 17/216 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH--WETQPMKWAMRL 90
L EA +G + L G + +++ E+M N L K L E ++ L
Sbjct: 94 LGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGML 153
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTN- 147
R +A ++Y ++ ++ DL A IL + + ++S FGL + D +Y+T+
Sbjct: 154 R---GIAAGMKYLANMN-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSG 209
Query: 148 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 203
+ +T PE + + T S V+SFG ++ ++++ P + + + ++
Sbjct: 210 GKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWE----LSNHEVMKAIND 265
Query: 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
D + + +L +C Q E RP +V
Sbjct: 266 GFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIV 301
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 99/240 (41%), Gaps = 24/240 (10%)
Query: 20 SVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78
+V E++ + E + L EA + + L+G + L++ E M L +L
Sbjct: 56 TVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 115
Query: 79 WETQ--------PMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130
+ P + +++A +A + Y ++ + ++ DL A + +D ++
Sbjct: 116 LRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIG 174
Query: 131 SFGLMKN------SRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
FG+ ++ R G + + PE ++ G T S V+SFG +L ++ + P
Sbjct: 175 DFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 234
Query: 185 PSHALDLIRSKNFLLLMDSALEGHFSN--DEGTELVRLASRCLQSEARERPNAKSLVISL 242
L + +M+ L N D EL+R+ C Q + RP+ ++ S+
Sbjct: 235 YQ---GLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSI 288
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 99/240 (41%), Gaps = 24/240 (10%)
Query: 20 SVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78
+V E++ + E + L EA + + L+G + L++ E M L +L
Sbjct: 47 TVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 106
Query: 79 WETQ--------PMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130
+ P + +++A +A + Y ++ + ++ DL A + +D ++
Sbjct: 107 LRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIG 165
Query: 131 SFGLMKN------SRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
FG+ ++ R G + + PE ++ G T S V+SFG +L ++ + P
Sbjct: 166 DFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 225
Query: 185 PSHALDLIRSKNFLLLMDSALEGHFSN--DEGTELVRLASRCLQSEARERPNAKSLVISL 242
L + +M+ L N D EL+R+ C Q + RP+ ++ S+
Sbjct: 226 YQ---GLSNEQVLRFVMEGGLLDKPDNCPDMLLELMRM---CWQYNPKMRPSFLEIISSI 279
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 7/92 (7%)
Query: 98 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----P 153
QAL Y ++G ++ D+ + IL DG +LS FG L TP P
Sbjct: 152 QALAYLHAQG-VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAP 210
Query: 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPP 185
E + E ++S G M+++++ G+ PP
Sbjct: 211 EVISRSLYATEVDIWSLGIMVIEMVDGE--PP 240
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 85/224 (37%), Gaps = 37/224 (16%)
Query: 47 LANLIGCCYEADERLLVA------------------EFMPNETLAKHLFHWETQPMKWAM 88
+ NL+G C + L+V EF+P + L K E
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHL------ 146
Query: 89 RLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN- 147
+ + +A+ +E+ +S+ + ++ DL A IL + ++ FGL ++ Y
Sbjct: 147 -IXYSFQVAKGMEFLASR-KXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKG 204
Query: 148 -----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLM 201
L + PE + T +S V+SFG +L ++ S G P +D + F +
Sbjct: 205 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFXRRL 260
Query: 202 DSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245
+ E+ + C E +RP LV L +L
Sbjct: 261 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 304
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 99/240 (41%), Gaps = 24/240 (10%)
Query: 20 SVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78
+V E++ + E + L EA + + L+G + L++ E M L +L
Sbjct: 56 TVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 115
Query: 79 WETQ--------PMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130
+ P + +++A +A + Y ++ + ++ DL A + +D ++
Sbjct: 116 LRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIG 174
Query: 131 SFGLMKNSRDGKSYSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
FG+ ++ + Y + + PE ++ G T S V+SFG +L ++ + P
Sbjct: 175 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 234
Query: 185 PSHALDLIRSKNFLLLMDSALEGHFSN--DEGTELVRLASRCLQSEARERPNAKSLVISL 242
L + +M+ L N D EL+R+ C Q + RP+ ++ S+
Sbjct: 235 YQ---GLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSI 288
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 99/240 (41%), Gaps = 24/240 (10%)
Query: 20 SVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78
+V E++ + E + L EA + + L+G + L++ E M L +L
Sbjct: 55 TVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 114
Query: 79 WETQ--------PMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130
+ P + +++A +A + Y ++ + ++ DL A + +D ++
Sbjct: 115 LRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIG 173
Query: 131 SFGLMKNSRDGKSYSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
FG+ ++ + Y + + PE ++ G T S V+SFG +L ++ + P
Sbjct: 174 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 233
Query: 185 PSHALDLIRSKNFLLLMDSALEGHFSN--DEGTELVRLASRCLQSEARERPNAKSLVISL 242
L + +M+ L N D EL+R+ C Q + RP+ ++ S+
Sbjct: 234 YQ---GLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSI 287
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 99/240 (41%), Gaps = 24/240 (10%)
Query: 20 SVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78
+V E++ + E + L EA + + L+G + L++ E M L +L
Sbjct: 53 TVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 112
Query: 79 WETQ--------PMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130
+ P + +++A +A + Y ++ + ++ DL A + +D ++
Sbjct: 113 LRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIG 171
Query: 131 SFGLMKNSRDGKSYSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
FG+ ++ + Y + + PE ++ G T S V+SFG +L ++ + P
Sbjct: 172 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 231
Query: 185 PSHALDLIRSKNFLLLMDSALEGHFSN--DEGTELVRLASRCLQSEARERPNAKSLVISL 242
L + +M+ L N D EL+R+ C Q + RP+ ++ S+
Sbjct: 232 YQ---GLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSI 285
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 99/240 (41%), Gaps = 24/240 (10%)
Query: 20 SVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78
+V E++ + E + L EA + + L+G + L++ E M L +L
Sbjct: 49 TVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 108
Query: 79 WETQ--------PMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130
+ P + +++A +A + Y ++ + ++ DL A + +D ++
Sbjct: 109 LRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIG 167
Query: 131 SFGLMKNSRDGKSYSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
FG+ ++ + Y + + PE ++ G T S V+SFG +L ++ + P
Sbjct: 168 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 227
Query: 185 PSHALDLIRSKNFLLLMDSALEGHFSN--DEGTELVRLASRCLQSEARERPNAKSLVISL 242
L + +M+ L N D EL+R+ C Q + RP+ ++ S+
Sbjct: 228 YQ---GLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSI 281
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Query: 96 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP--- 152
+ A++YC K ++ DL A +L D D N +++ FG G T P
Sbjct: 115 IVSAVQYCHQKF-IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAA 173
Query: 153 PEYMRTGRVT-PESVVYSFGTMLLDLLSG 180
PE + + PE V+S G +L L+SG
Sbjct: 174 PELFQGKKYDGPEVDVWSLGVILYTLVSG 202
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 99/240 (41%), Gaps = 24/240 (10%)
Query: 20 SVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78
+V E++ + E + L EA + + L+G + L++ E M L +L
Sbjct: 55 TVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 114
Query: 79 WETQ--------PMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130
+ P + +++A +A + Y ++ + ++ DL A + +D ++
Sbjct: 115 LRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIG 173
Query: 131 SFGLMKNSRDGKSYSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
FG+ ++ + Y + + PE ++ G T S V+SFG +L ++ + P
Sbjct: 174 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 233
Query: 185 PSHALDLIRSKNFLLLMDSALEGHFSN--DEGTELVRLASRCLQSEARERPNAKSLVISL 242
L + +M+ L N D EL+R+ C Q + RP+ ++ S+
Sbjct: 234 YQ---GLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSI 287
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 99/240 (41%), Gaps = 24/240 (10%)
Query: 20 SVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78
+V E++ + E + L EA + + L+G + L++ E M L +L
Sbjct: 62 TVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 121
Query: 79 WETQ--------PMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130
+ P + +++A +A + Y ++ + ++ DL A + +D ++
Sbjct: 122 LRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIG 180
Query: 131 SFGLMKNSRDGKSYSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
FG+ ++ + Y + + PE ++ G T S V+SFG +L ++ + P
Sbjct: 181 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 240
Query: 185 PSHALDLIRSKNFLLLMDSALEGHFSN--DEGTELVRLASRCLQSEARERPNAKSLVISL 242
L + +M+ L N D EL+R+ C Q + RP+ ++ S+
Sbjct: 241 YQ---GLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSI 294
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 62/139 (44%), Gaps = 10/139 (7%)
Query: 50 LIG--CCYEADERLL-VAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSK 106
L+G C++ + RL V E++ L H+ P + A + LA L Y +
Sbjct: 83 LVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNYLHER 140
Query: 107 GRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVT 162
G +Y DL +L D +G+ +L+ +G+ K ++ TP PE +R
Sbjct: 141 G-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYG 199
Query: 163 PESVVYSFGTMLLDLLSGK 181
++ G ++ ++++G+
Sbjct: 200 FSVDWWALGVLMFEMMAGR 218
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Query: 96 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP--- 152
+ A++YC K ++ DL A +L D D N +++ FG G T P
Sbjct: 122 IVSAVQYCHQKF-IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAA 180
Query: 153 PEYMRTGRVT-PESVVYSFGTMLLDLLSG 180
PE + + PE V+S G +L L+SG
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Query: 96 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP--- 152
+ A++YC K ++ DL A +L D D N +++ FG G T P
Sbjct: 122 IVSAVQYCHQKF-IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAA 180
Query: 153 PEYMRTGRVT-PESVVYSFGTMLLDLLSG 180
PE + + PE V+S G +L L+SG
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3SZ7|A Chain A, Crystal Structure Of The Sgt2 Tpr Domain From Aspergillus
Fumigatus
Length = 164
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Query: 322 KKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQV 381
K G+ A K++S AID YTQ + +P + R +Y + ++A DA A V
Sbjct: 15 KSEGNAAMARKEYSKAIDLYTQALSIAP-ANPIYLSNRAAAYSASGQHEKAAEDAELATV 73
Query: 382 VSPDWPTALYLQAACLFSLGMENDARETLKDGTNLE 417
V P + A F + A+E + G E
Sbjct: 74 VDPKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAE 109
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Query: 96 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP--- 152
+ A++YC K ++ DL A +L D D N +++ FG G T P
Sbjct: 122 IVSAVQYCHQKF-IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAA 180
Query: 153 PEYMRTGRVT-PESVVYSFGTMLLDLLSG 180
PE + + PE V+S G +L L+SG
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 99/240 (41%), Gaps = 24/240 (10%)
Query: 20 SVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78
+V E++ + E + L EA + + L+G + L++ E M L +L
Sbjct: 84 TVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 143
Query: 79 WETQ--------PMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130
+ P + +++A +A + Y ++ + ++ DL A + +D ++
Sbjct: 144 LRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIG 202
Query: 131 SFGLMKNSRDGKSYSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
FG+ ++ + Y + + PE ++ G T S V+SFG +L ++ + P
Sbjct: 203 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 262
Query: 185 PSHALDLIRSKNFLLLMDSALEGHFSN--DEGTELVRLASRCLQSEARERPNAKSLVISL 242
L + +M+ L N D EL+R+ C Q + RP+ ++ S+
Sbjct: 263 YQ---GLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSI 316
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 13/156 (8%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L EA +G + L G ++V E+M N +L L T ++ + V
Sbjct: 98 LSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL---RTHDGQFTIMQLV 154
Query: 93 ALY--LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTN- 147
+ + + Y S G ++ DL A +L D + ++S FGL + D +Y+T
Sbjct: 155 GMLRGVGAGMRYLSDLG-YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTG 213
Query: 148 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS 179
+ +T PE + + S V+SFG ++ ++L+
Sbjct: 214 GKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 23/160 (14%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADER--LLVAEFMPNETLAKHLFHWETQPMKWAMRL-- 90
E + + L S+ + G Y + LV E++P+ L L + RL
Sbjct: 61 EIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL-------QRHRARLDA 113
Query: 91 -RVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-- 144
R+ LY +Q +EY S+ R ++ DL A IL + + + +++ FGL K K Y
Sbjct: 114 SRLLLYSSQICKGMEYLGSR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV 172
Query: 145 -----STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS 179
+ + + PE + + +S V+SFG +L +L +
Sbjct: 173 VREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 62/139 (44%), Gaps = 10/139 (7%)
Query: 50 LIG--CCYEADERLL-VAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSK 106
L+G C++ + RL V E++ L H+ P + A + LA L Y +
Sbjct: 68 LVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNYLHER 125
Query: 107 GRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVT 162
G +Y DL +L D +G+ +L+ +G+ K ++ TP PE +R
Sbjct: 126 G-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYG 184
Query: 163 PESVVYSFGTMLLDLLSGK 181
++ G ++ ++++G+
Sbjct: 185 FSVDWWALGVLMFEMMAGR 203
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 85/224 (37%), Gaps = 37/224 (16%)
Query: 47 LANLIGCCYEADERLLVA------------------EFMPNETLAKHLFHWETQPMKWAM 88
+ NL+G C + L+V EF+P + L K E
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHL------ 146
Query: 89 RLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN- 147
+ + +A+ +E+ +S+ + ++ DL A IL + ++ FGL ++ Y
Sbjct: 147 -ICYSFQVAKGMEFLASR-KXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 204
Query: 148 -----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLM 201
L + PE + T +S V+SFG +L ++ S G P +D + F +
Sbjct: 205 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFCRRL 260
Query: 202 DSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245
+ E+ + C E +RP LV L +L
Sbjct: 261 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 304
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 87/191 (45%), Gaps = 11/191 (5%)
Query: 17 LKSSVLESSDLG-ETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75
LK L++ D G + + E + L + +LI + LV EFM + L K
Sbjct: 50 LKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKD-LKKV 108
Query: 76 LFHWETQPMKWAMRLRVALY-LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL 134
L E + ++++ LY L + + +C + R L+ DL +L + DG +L+ FGL
Sbjct: 109 LD--ENKTGLQDSQIKIYLYQLLRGVAHCH-QHRILHRDLKPQNLLINSDGALKLADFGL 165
Query: 135 MKN-SRDGKSYS---TNLAFTPPEYMRTGRVTPESV-VYSFGTMLLDLLSGKHIPPSHAL 189
+ +SY+ L + P+ + + SV ++S G + ++++GK + P
Sbjct: 166 ARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTD 225
Query: 190 DLIRSKNFLLL 200
D K F +L
Sbjct: 226 DDQLPKIFSIL 236
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 23/160 (14%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADER--LLVAEFMPNETLAKHLFHWETQPMKWAMRL-- 90
E + + L S+ + G Y + LV E++P+ L L + RL
Sbjct: 62 EIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL-------QRHRARLDA 114
Query: 91 -RVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-- 144
R+ LY +Q +EY S+ R ++ DL A IL + + + +++ FGL K K Y
Sbjct: 115 SRLLLYSSQICKGMEYLGSR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV 173
Query: 145 -----STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS 179
+ + + PE + + +S V+SFG +L +L +
Sbjct: 174 VREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 62/139 (44%), Gaps = 10/139 (7%)
Query: 50 LIG--CCYEADERLL-VAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSK 106
L+G C++ + RL V E++ L H+ P + A + LA L Y +
Sbjct: 72 LVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNYLHER 129
Query: 107 GRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVT 162
G +Y DL +L D +G+ +L+ +G+ K ++ TP PE +R
Sbjct: 130 G-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYG 188
Query: 163 PESVVYSFGTMLLDLLSGK 181
++ G ++ ++++G+
Sbjct: 189 FSVDWWALGVLMFEMMAGR 207
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 72/174 (41%), Gaps = 24/174 (13%)
Query: 74 KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFG 133
K + E Q + W +++ +AL + L+ D+ + I KDG +L FG
Sbjct: 118 KGVLFQEDQILDWFVQICLALKHVH-------DRKILHRDIKSQNIFLTKDGTVQLGDFG 170
Query: 134 LMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHAL 189
+ + + TP PE +S +++ G +L +L + K HA
Sbjct: 171 IARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLK-----HAF 225
Query: 190 DLIRSKNFLLLMDSA----LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
+ KN +L + S + H+S D L L S+ + R+RP+ S++
Sbjct: 226 EAGSMKNLVLKIISGSFPPVSLHYSYD----LRSLVSQLFKRNPRDRPSVNSIL 275
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 12/131 (9%)
Query: 62 LVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILF 121
+V E++ TL + + H E PM + V QAL + G ++ D+ I+
Sbjct: 93 IVMEYVDGVTL-RDIVHTEG-PMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMI 149
Query: 122 DKDGNPRLSSFGLMKNSRDGKSYSTNLA-------FTPPEYMRTGRVTPESVVYSFGTML 174
++ FG+ + D + T A + PE R V S VYS G +L
Sbjct: 150 SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 209
Query: 175 LDLLSGKHIPP 185
++L+G+ PP
Sbjct: 210 YEVLTGE--PP 218
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 62/131 (47%), Gaps = 21/131 (16%)
Query: 62 LVAEFMPNETLAKHLFHWETQPMKWAMRL---RVALYLAQ---ALEYCSSKGRALYHDLN 115
LV E++P+ L L + RL R+ LY +Q +EY S+ R ++ DL
Sbjct: 103 LVMEYLPSGCLRDFL-------QRHRARLDASRLLLYSSQICKGMEYLGSR-RCVHRDLA 154
Query: 116 AYRILFDKDGNPRLSSFGLMKNSRDGKSY-------STNLAFTPPEYMRTGRVTPESVVY 168
A IL + + + +++ FGL K K Y + + + PE + + +S V+
Sbjct: 155 ARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVW 214
Query: 169 SFGTMLLDLLS 179
SFG +L +L +
Sbjct: 215 SFGVVLYELFT 225
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 12/131 (9%)
Query: 62 LVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILF 121
+V E++ TL + + H E PM + V QAL + G ++ D+ I+
Sbjct: 93 IVMEYVDGVTL-RDIVHTEG-PMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMI 149
Query: 122 DKDGNPRLSSFGLMKNSRDGKSYSTNLA-------FTPPEYMRTGRVTPESVVYSFGTML 174
++ FG+ + D + T A + PE R V S VYS G +L
Sbjct: 150 SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 209
Query: 175 LDLLSGKHIPP 185
++L+G+ PP
Sbjct: 210 YEVLTGE--PP 218
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 21/121 (17%)
Query: 90 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA 149
L + L +A+A+E+ SKG ++ DL I F D ++ FGL+ + T L
Sbjct: 121 LHIFLQIAEAVEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 179
Query: 150 FTPPEYMRTGRV------TPESV----------VYSFGTMLLDLLSGKHIPPSHALDLIR 193
P TG+V +PE + ++S G +L +LL P S ++ +R
Sbjct: 180 PMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL----YPFSTQMERVR 235
Query: 194 S 194
+
Sbjct: 236 T 236
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 87/191 (45%), Gaps = 11/191 (5%)
Query: 17 LKSSVLESSDLG-ETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKH 75
LK L++ D G + + E + L + +LI + LV EFM + L K
Sbjct: 50 LKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKD-LKKV 108
Query: 76 LFHWETQPMKWAMRLRVALY-LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL 134
L E + ++++ LY L + + +C + R L+ DL +L + DG +L+ FGL
Sbjct: 109 LD--ENKTGLQDSQIKIYLYQLLRGVAHCH-QHRILHRDLKPQNLLINSDGALKLADFGL 165
Query: 135 MKN-SRDGKSYS---TNLAFTPPEYMRTGRVTPESV-VYSFGTMLLDLLSGKHIPPSHAL 189
+ +SY+ L + P+ + + SV ++S G + ++++GK + P
Sbjct: 166 ARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTD 225
Query: 190 DLIRSKNFLLL 200
D K F +L
Sbjct: 226 DDQLPKIFSIL 236
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 12/131 (9%)
Query: 62 LVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILF 121
+V E++ TL + + H E PM + V QAL + G ++ D+ I+
Sbjct: 110 IVMEYVDGVTL-RDIVHTEG-PMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMI 166
Query: 122 DKDGNPRLSSFGLMKNSRDGKSYSTNLA-------FTPPEYMRTGRVTPESVVYSFGTML 174
++ FG+ + D + T A + PE R V S VYS G +L
Sbjct: 167 SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 226
Query: 175 LDLLSGKHIPP 185
++L+G+ PP
Sbjct: 227 YEVLTGE--PP 235
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 98/240 (40%), Gaps = 24/240 (10%)
Query: 20 SVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78
+V E++ + E + L EA + + L+G + L++ E M L +L
Sbjct: 52 TVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 111
Query: 79 WETQ--------PMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130
P + +++A +A + Y ++ + ++ DL A + +D ++
Sbjct: 112 LRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIG 170
Query: 131 SFGLMKNSRDGKSYSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
FG+ ++ + Y + + PE ++ G T S V+SFG +L ++ + P
Sbjct: 171 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 230
Query: 185 PSHALDLIRSKNFLLLMDSALEGHFSN--DEGTELVRLASRCLQSEARERPNAKSLVISL 242
L + +M+ L N D EL+R+ C Q + RP+ ++ S+
Sbjct: 231 YQ---GLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSI 284
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 56/131 (42%), Gaps = 12/131 (9%)
Query: 62 LVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILF 121
+V E++ TL + + H E PM + V QAL + G ++ D+ IL
Sbjct: 93 IVMEYVDGVTL-RDIVHTEG-PMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANILI 149
Query: 122 DKDGNPRLSSFGLMKNSRD-GKSYSTNLA------FTPPEYMRTGRVTPESVVYSFGTML 174
++ FG+ + D G S A + PE R V S VYS G +L
Sbjct: 150 SATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 209
Query: 175 LDLLSGKHIPP 185
++L+G+ PP
Sbjct: 210 YEVLTGE--PP 218
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 12/131 (9%)
Query: 62 LVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILF 121
+V E++ TL + + H E PM + V QAL + G ++ D+ I+
Sbjct: 93 IVMEYVDGVTL-RDIVHTEG-PMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMI 149
Query: 122 DKDGNPRLSSFGLMKNSRDGKSYSTNLA-------FTPPEYMRTGRVTPESVVYSFGTML 174
++ FG+ + D + T A + PE R V S VYS G +L
Sbjct: 150 SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 209
Query: 175 LDLLSGKHIPP 185
++L+G+ PP
Sbjct: 210 YEVLTGE--PP 218
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 12/131 (9%)
Query: 62 LVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILF 121
+V E++ TL + + H E PM + V QAL + G ++ D+ I+
Sbjct: 93 IVMEYVDGVTL-RDIVHTEG-PMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMI 149
Query: 122 DKDGNPRLSSFGLMKNSRDGKSYSTNLA-------FTPPEYMRTGRVTPESVVYSFGTML 174
++ FG+ + D + T A + PE R V S VYS G +L
Sbjct: 150 SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 209
Query: 175 LDLLSGKHIPP 185
++L+G+ PP
Sbjct: 210 YEVLTGE--PP 218
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 65/157 (41%), Gaps = 12/157 (7%)
Query: 96 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN------LA 149
+A+ +E+ +S+ + ++ DL A IL + ++ FGL ++ Y L
Sbjct: 148 VAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 206
Query: 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGH 208
+ PE + T +S V+SFG +L ++ S G P +D + F +
Sbjct: 207 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFCRRLKEGTRMR 262
Query: 209 FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245
+ E+ + C E +RP LV L +L
Sbjct: 263 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 66/160 (41%), Gaps = 12/160 (7%)
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN----- 147
+ +A+ +E+ +S+ + ++ DL A IL + ++ FGL ++ Y
Sbjct: 154 SFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 212
Query: 148 -LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSAL 205
L + PE + T +S V+SFG +L ++ S G P +D + F +
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFCRRLKEGT 268
Query: 206 EGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245
+ E+ + C E +RP LV L +L
Sbjct: 269 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 76/173 (43%), Gaps = 23/173 (13%)
Query: 26 DLGETLN--LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQP 83
D+ +T+ +EAK L+ + L G C + LV EF L + L P
Sbjct: 45 DISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPP 104
Query: 84 ---MKWAMRLRVALYLAQALEYCSSKGRA--LYHDLNAYRILF-DKDGNPRLSS------ 131
+ WA+++ A+ + Y + ++ DL + IL K N LS+
Sbjct: 105 DILVNWAVQI------ARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKIT 158
Query: 132 -FGLMKN-SRDGK-SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGK 181
FGL + R K S + A+ PE +R + S V+S+G +L +LL+G+
Sbjct: 159 DFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211
>pdb|2BUG|A Chain A, Solution Structure Of The Tpr Domain From Protein
Phosphatase 5 In Complex With Hsp90 Derived Peptide
Length = 140
Score = 38.1 bits (87), Expect = 0.010, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Query: 322 KKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPT---VYARRCLSYLMNDMPQEALGDAMQ 378
K + F+AKD+ AI Y+Q I+ ++P+ Y R L+YL + AL DA +
Sbjct: 25 KTQANDYFKAKDYENAIKFYSQAIE----LNPSNAIYYGNRSLAYLRTECYGYALNDATR 80
Query: 379 AQVVSPDWPTALYLQAACLFSLGMENDARETLKD 412
A + + Y +AA +LG R L+D
Sbjct: 81 AIELDKKYIKGYYRRAASNMALG---KFRAALRD 111
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 63/156 (40%), Gaps = 20/156 (12%)
Query: 109 ALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST--NLAFTPPEYMRTGRVTPESV 166
+Y DL IL D+ G+ R+S GL + K +++ + PE ++ G S
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSA 372
Query: 167 -VYSFGTMLLDLLSGKHIP-------PSHALDLIRSKNFLLLMD-------SALEGHFSN 211
+S G ML LL G H P H +D + + L D S LEG
Sbjct: 373 DWFSLGCMLFKLLRG-HSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQR 431
Query: 212 DEGTELVRLASRCLQSEARERPNAKSLVISLMSLQK 247
D L L E +E P +SL ++ LQK
Sbjct: 432 DVNRRLGCLGRGA--QEVKESPFFRSLDWQMVFLQK 465
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 63/156 (40%), Gaps = 20/156 (12%)
Query: 109 ALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST--NLAFTPPEYMRTGRVTPESV 166
+Y DL IL D+ G+ R+S GL + K +++ + PE ++ G S
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSA 372
Query: 167 -VYSFGTMLLDLLSGKHIP-------PSHALDLIRSKNFLLLMD-------SALEGHFSN 211
+S G ML LL G H P H +D + + L D S LEG
Sbjct: 373 DWFSLGCMLFKLLRG-HSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQR 431
Query: 212 DEGTELVRLASRCLQSEARERPNAKSLVISLMSLQK 247
D L L E +E P +SL ++ LQK
Sbjct: 432 DVNRRLGCLGRGA--QEVKESPFFRSLDWQMVFLQK 465
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 66/160 (41%), Gaps = 12/160 (7%)
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN----- 147
+ +A+ +E+ +S+ + ++ DL A IL + ++ FGL ++ Y
Sbjct: 156 SFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 214
Query: 148 -LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSAL 205
L + PE + T +S V+SFG +L ++ S G P +D + F +
Sbjct: 215 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFCRRLKEGT 270
Query: 206 EGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245
+ E+ + C E +RP LV L +L
Sbjct: 271 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 310
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 17/146 (11%)
Query: 58 DERLL--VAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLN 115
D+R L V E+MP L + +++ P KWA + LA L+ S G ++ D+
Sbjct: 140 DDRYLYMVMEYMPGGDLVNLMSNYDV-PEKWARFYTAEVVLA--LDAIHSMG-FIHRDVK 195
Query: 116 AYRILFDKDGNPRLSSFGL-MKNSRDGKSYSTNLAFTP----PEYMRT----GRVTPESV 166
+L DK G+ +L+ FG MK +++G TP PE +++ G E
Sbjct: 196 PDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECD 255
Query: 167 VYSFGTMLLDLLSGKHIPPSHALDLI 192
+S G L ++L G P +A L+
Sbjct: 256 WWSVGVFLYEMLVGD--TPFYADSLV 279
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 81/186 (43%), Gaps = 18/186 (9%)
Query: 33 LEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW--------ETQP 83
+ E K + +L + E + NL+G C L++ E+ L L + +P
Sbjct: 89 MSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRP 148
Query: 84 MKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS 143
++ L + +AQ + + +SK ++ D+ A +L ++ FGL ++ + +
Sbjct: 149 LELRDLLHFSSQVAQGMAFLASK-NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 207
Query: 144 YSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNF 197
Y + + PE + T +S V+S+G +L ++ S P + L+ SK +
Sbjct: 208 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP--YPGILVNSKFY 265
Query: 198 LLLMDS 203
L+ D
Sbjct: 266 KLVKDG 271
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 68/164 (41%), Gaps = 20/164 (12%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL----------AKHLFHWE---T 81
EA+ + L+ + + G C E L+V E+M + L AK L E
Sbjct: 93 EAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAP 152
Query: 82 QPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN---- 137
P+ L VA +A + Y + ++ DL L + ++ FG+ ++
Sbjct: 153 GPLGLGQLLAVASQVAAGMVYLAGL-HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYST 211
Query: 138 --SRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS 179
R G + + PPE + + T ES V+SFG +L ++ +
Sbjct: 212 DYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 17/146 (11%)
Query: 58 DERLL--VAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLN 115
D+R L V E+MP L + +++ P KWA + LA L+ S G ++ D+
Sbjct: 145 DDRYLYMVMEYMPGGDLVNLMSNYDV-PEKWARFYTAEVVLA--LDAIHSMG-FIHRDVK 200
Query: 116 AYRILFDKDGNPRLSSFGL-MKNSRDGKSYSTNLAFTP----PEYMRT----GRVTPESV 166
+L DK G+ +L+ FG MK +++G TP PE +++ G E
Sbjct: 201 PDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECD 260
Query: 167 VYSFGTMLLDLLSGKHIPPSHALDLI 192
+S G L ++L G P +A L+
Sbjct: 261 WWSVGVFLYEMLVGD--TPFYADSLV 284
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 98/240 (40%), Gaps = 24/240 (10%)
Query: 20 SVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78
+V E++ + E + L EA + + L+G + L++ E M L +L
Sbjct: 49 TVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 108
Query: 79 WETQ--------PMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130
+ P + +++A +A + Y ++ + ++ DL A +D ++
Sbjct: 109 LRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCXVAEDFTVKIG 167
Query: 131 SFGLMKNSRDGKSYSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
FG+ ++ + Y + + PE ++ G T S V+SFG +L ++ + P
Sbjct: 168 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 227
Query: 185 PSHALDLIRSKNFLLLMDSALEGHFSN--DEGTELVRLASRCLQSEARERPNAKSLVISL 242
L + +M+ L N D EL+R+ C Q + RP+ ++ S+
Sbjct: 228 YQ---GLSNEQVLRFVMEGGLLDKPDNCPDMLLELMRM---CWQYNPKMRPSFLEIISSI 281
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 17/146 (11%)
Query: 58 DERLL--VAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLN 115
D+R L V E+MP L + +++ P KWA + LA L+ S G ++ D+
Sbjct: 145 DDRYLYMVMEYMPGGDLVNLMSNYDV-PEKWARFYTAEVVLA--LDAIHSMG-FIHRDVK 200
Query: 116 AYRILFDKDGNPRLSSFGL-MKNSRDGKSYSTNLAFTP----PEYMRT----GRVTPESV 166
+L DK G+ +L+ FG MK +++G TP PE +++ G E
Sbjct: 201 PDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECD 260
Query: 167 VYSFGTMLLDLLSGKHIPPSHALDLI 192
+S G L ++L G P +A L+
Sbjct: 261 WWSVGVFLYEMLVGD--TPFYADSLV 284
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 65/157 (41%), Gaps = 12/157 (7%)
Query: 96 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN------LA 149
+A+ +E+ +S+ + ++ DL A IL + ++ FGL ++ Y L
Sbjct: 148 VAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 206
Query: 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGH 208
+ PE + T +S V+SFG +L ++ S G P +D + F +
Sbjct: 207 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFCRRLKEGTRMR 262
Query: 209 FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245
+ E+ + C E +RP LV L +L
Sbjct: 263 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 63/156 (40%), Gaps = 20/156 (12%)
Query: 109 ALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST--NLAFTPPEYMRTGRVTPESV 166
+Y DL IL D+ G+ R+S GL + K +++ + PE ++ G S
Sbjct: 312 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSA 371
Query: 167 -VYSFGTMLLDLLSGKHIP-------PSHALDLIRSKNFLLLMD-------SALEGHFSN 211
+S G ML LL G H P H +D + + L D S LEG
Sbjct: 372 DWFSLGCMLFKLLRG-HSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQR 430
Query: 212 DEGTELVRLASRCLQSEARERPNAKSLVISLMSLQK 247
D L L E +E P +SL ++ LQK
Sbjct: 431 DVNRRLGCLGRGA--QEVKESPFFRSLDWQMVFLQK 464
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 13/156 (8%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L EA +G + L G ++V E+M N +L L T ++ + V
Sbjct: 98 LSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL---RTHDGQFTIMQLV 154
Query: 93 ALY--LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL---MKNSRDGKSYSTN 147
+ + + Y S G ++ DL A +L D + ++S FGL +++ D +T
Sbjct: 155 GMLRGVGAGMRYLSDLG-YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTG 213
Query: 148 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS 179
+ +T PE + + S V+SFG ++ ++L+
Sbjct: 214 GKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 63/156 (40%), Gaps = 20/156 (12%)
Query: 109 ALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST--NLAFTPPEYMRTGRVTPESV 166
+Y DL IL D+ G+ R+S GL + K +++ + PE ++ G S
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSA 372
Query: 167 -VYSFGTMLLDLLSGKHIP-------PSHALDLIRSKNFLLLMD-------SALEGHFSN 211
+S G ML LL G H P H +D + + L D S LEG
Sbjct: 373 DWFSLGCMLFKLLRG-HSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQR 431
Query: 212 DEGTELVRLASRCLQSEARERPNAKSLVISLMSLQK 247
D L L E +E P +SL ++ LQK
Sbjct: 432 DVNRRLGCLGRGA--QEVKESPFFRSLDWQMVFLQK 465
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 66/160 (41%), Gaps = 12/160 (7%)
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN----- 147
+ +A+ +E+ +S+ + ++ DL A IL + ++ FGL ++ Y
Sbjct: 199 SFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 257
Query: 148 -LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSAL 205
L + PE + T +S V+SFG +L ++ S G P +D + F +
Sbjct: 258 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFCRRLKEGT 313
Query: 206 EGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245
+ E+ + C E +RP LV L +L
Sbjct: 314 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 353
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L EA +G + +L G + +++ E+M N +L L ++ + V
Sbjct: 78 LSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL---RKNDGRFTVIQLV 134
Query: 93 ALY--LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTN- 147
+ + ++Y S A++ DL A IL + + ++S FG+ + D +Y+T
Sbjct: 135 GMLRGIGSGMKYLSDMS-AVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRG 193
Query: 148 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS 179
+ +T PE + + T S V+S+G ++ +++S
Sbjct: 194 GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 94 LYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNS-RDG---KSYST 146
YLA+ AL + KG +Y DL I+ + G+ +L+ FGL K S DG ++
Sbjct: 125 FYLAEISMALGHLHQKG-IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCG 183
Query: 147 NLAFTPPEY-MRTGRVTPESVVYSFGTMLLDLLSGKHIPP 185
+ + PE MR+G +S G ++ D+L+G PP
Sbjct: 184 TIEYMAPEILMRSGHNRAVD-WWSLGALMYDMLTGA--PP 220
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 98/240 (40%), Gaps = 24/240 (10%)
Query: 20 SVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH 78
+V E++ + E + L EA + + L+G + L++ E M L +L
Sbjct: 62 TVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 121
Query: 79 WETQ--------PMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130
P + +++A +A + Y ++ + ++ DL A + +D ++
Sbjct: 122 LRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIG 180
Query: 131 SFGLMKNSRDGKSYSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
FG+ ++ + Y + + PE ++ G T S V+SFG +L ++ + P
Sbjct: 181 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 240
Query: 185 PSHALDLIRSKNFLLLMDSALEGHFSN--DEGTELVRLASRCLQSEARERPNAKSLVISL 242
L + +M+ L N D EL+R+ C Q + RP+ ++ S+
Sbjct: 241 YQ---GLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSI 294
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 66/160 (41%), Gaps = 12/160 (7%)
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN----- 147
+ +A+ +E+ +S+ + ++ DL A IL + ++ FGL ++ Y
Sbjct: 204 SFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 262
Query: 148 -LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSAL 205
L + PE + T +S V+SFG +L ++ S G P +D + F +
Sbjct: 263 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFCRRLKEGT 318
Query: 206 EGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245
+ E+ + C E +RP LV L +L
Sbjct: 319 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 358
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 66/160 (41%), Gaps = 12/160 (7%)
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN----- 147
+ +A+ +E+ +S+ + ++ DL A IL + ++ FGL ++ Y
Sbjct: 206 SFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 264
Query: 148 -LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSAL 205
L + PE + T +S V+SFG +L ++ S G P +D + F +
Sbjct: 265 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFCRRLKEGT 320
Query: 206 EGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245
+ E+ + C E +RP LV L +L
Sbjct: 321 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 360
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 66/160 (41%), Gaps = 12/160 (7%)
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN----- 147
+ +A+ +E+ +S+ + ++ DL A IL + ++ FGL ++ Y
Sbjct: 197 SFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 255
Query: 148 -LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSAL 205
L + PE + T +S V+SFG +L ++ S G P +D + F +
Sbjct: 256 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFCRRLKEGT 311
Query: 206 EGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245
+ E+ + C E +RP LV L +L
Sbjct: 312 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 351
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 65/157 (41%), Gaps = 12/157 (7%)
Query: 96 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN------LA 149
+A+ +E+ +S+ + ++ DL A IL + ++ FGL ++ Y L
Sbjct: 194 VAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 252
Query: 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGH 208
+ PE + T +S V+SFG +L ++ S G P +D + F +
Sbjct: 253 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFCRRLKEGTRMR 308
Query: 209 FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245
+ E+ + C E +RP LV L +L
Sbjct: 309 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 345
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 13/105 (12%)
Query: 99 ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL-MKNSRDGKSYSTNLAFTP----P 153
AL Y + ++ DL A ILF DG+ +L+ FG+ KN+R + TP P
Sbjct: 120 ALNYLHD-NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAP 178
Query: 154 EYM--RTGRVTP---ESVVYSFGTMLLDLLSGKHIPPSHALDLIR 193
E + T + P ++ V+S G L+++ + PP H L+ +R
Sbjct: 179 EVVMCETSKDRPYDYKADVWSLGITLIEMAEIE--PPHHELNPMR 221
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 69/169 (40%), Gaps = 11/169 (6%)
Query: 18 KSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77
K ++ ++ T+ E++ + N R L L D V E+ L F
Sbjct: 40 KEVIIAKDEVAHTVT--ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FF 94
Query: 78 HWETQPMKWAMRLRV-ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136
H + + R R + ALEY S+ +Y D+ ++ DKDG+ +++ FGL K
Sbjct: 95 HLSRERVFTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCK 153
Query: 137 NS-RDG---KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGK 181
DG K++ + PE + + G ++ +++ G+
Sbjct: 154 EGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 68/164 (41%), Gaps = 20/164 (12%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL----------AKHLFHWE---T 81
EA+ + L+ + + G C E L+V E+M + L AK L E
Sbjct: 64 EAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAP 123
Query: 82 QPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN---- 137
P+ L VA +A + Y + ++ DL L + ++ FG+ ++
Sbjct: 124 GPLGLGQLLAVASQVAAGMVYLAGL-HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYST 182
Query: 138 --SRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS 179
R G + + PPE + + T ES V+SFG +L ++ +
Sbjct: 183 DYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 8/98 (8%)
Query: 91 RVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KS 143
R Y AQ LE+ + +Y DL +L D DGN R+S GL + G K
Sbjct: 290 RAIFYTAQIVSGLEHLHQR-NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG 348
Query: 144 YSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGK 181
Y+ F PE + ++ G L ++++ +
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 81/186 (43%), Gaps = 18/186 (9%)
Query: 33 LEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHW--------ETQP 83
+ E K + +L + E + NL+G C L++ E+ L L + +P
Sbjct: 97 MSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRP 156
Query: 84 MKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS 143
++ L + +AQ + + +SK ++ D+ A +L ++ FGL ++ + +
Sbjct: 157 LELRDLLHFSSQVAQGMAFLASK-NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 215
Query: 144 YSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNF 197
Y + + PE + T +S V+S+G +L ++ S P + L+ SK +
Sbjct: 216 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP--YPGILVNSKFY 273
Query: 198 LLLMDS 203
L+ D
Sbjct: 274 KLVKDG 279
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 8/98 (8%)
Query: 91 RVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KS 143
R Y AQ LE+ + +Y DL +L D DGN R+S GL + G K
Sbjct: 290 RAIFYTAQIVSGLEHLHQR-NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG 348
Query: 144 YSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGK 181
Y+ F PE + ++ G L ++++ +
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 69/169 (40%), Gaps = 11/169 (6%)
Query: 18 KSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77
K ++ ++ T+ E++ + N R L L D V E+ L F
Sbjct: 43 KEVIIAKDEVAHTVT--ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FF 97
Query: 78 HWETQPMKWAMRLRV-ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136
H + + R R + ALEY S+ +Y D+ ++ DKDG+ +++ FGL K
Sbjct: 98 HLSRERVFTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCK 156
Query: 137 NS-RDG---KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGK 181
DG K++ + PE + + G ++ +++ G+
Sbjct: 157 EGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 8/98 (8%)
Query: 91 RVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KS 143
R Y AQ LE+ + +Y DL +L D DGN R+S GL + G K
Sbjct: 290 RAIFYTAQIVSGLEHLHQR-NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG 348
Query: 144 YSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGK 181
Y+ F PE + ++ G L ++++ +
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 69/169 (40%), Gaps = 11/169 (6%)
Query: 18 KSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77
K ++ ++ T+ E++ + N R L L D V E+ L F
Sbjct: 40 KEVIIAKDEVAHTVT--ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FF 94
Query: 78 HWETQPMKWAMRLRV-ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136
H + + R R + ALEY S+ +Y D+ ++ DKDG+ +++ FGL K
Sbjct: 95 HLSRERVFTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCK 153
Query: 137 NS-RDG---KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGK 181
DG K++ + PE + + G ++ +++ G+
Sbjct: 154 EGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 68/164 (41%), Gaps = 20/164 (12%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETL----------AKHLFHWE---T 81
EA+ + L+ + + G C E L+V E+M + L AK L E
Sbjct: 70 EAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAP 129
Query: 82 QPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN---- 137
P+ L VA +A + Y + ++ DL L + ++ FG+ ++
Sbjct: 130 GPLGLGQLLAVASQVAAGMVYLAGL-HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYST 188
Query: 138 --SRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS 179
R G + + PPE + + T ES V+SFG +L ++ +
Sbjct: 189 DYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 8/98 (8%)
Query: 91 RVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KS 143
R Y AQ LE+ + +Y DL +L D DGN R+S GL + G K
Sbjct: 290 RAIFYTAQIVSGLEHLHQR-NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG 348
Query: 144 YSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGK 181
Y+ F PE + ++ G L ++++ +
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 74/158 (46%), Gaps = 15/158 (9%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ--PMKWAMRL 90
L EA +G + +L G ++ +++ EFM N +L L + Q ++ L
Sbjct: 56 LSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGML 115
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS---YSTN 147
R +A ++Y + ++ L A IL + + ++S FGL + D S Y++
Sbjct: 116 R---GIAAGMKYLADMN-YVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSA 171
Query: 148 LA------FTPPEYMRTGRVTPESVVYSFGTMLLDLLS 179
L +T PE ++ + T S V+S+G ++ +++S
Sbjct: 172 LGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Query: 96 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP--- 152
+ A++YC K ++ DL A +L D D N +++ FG G P
Sbjct: 122 IVSAVQYCHQKF-IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAA 180
Query: 153 PEYMRTGRVT-PESVVYSFGTMLLDLLSG 180
PE + + PE V+S G +L L+SG
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA- 149
R+ + A++YC + ++ DL +L D N +++ FGL DG+ T+
Sbjct: 115 RLFQQILSAVDYCH-RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGS 173
Query: 150 --FTPPEYMRTGRV--TPESVVYSFGTMLLDLLSG------KHIP 184
+ PE + +GR+ PE ++S G +L LL G +H+P
Sbjct: 174 PNYAAPEVI-SGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP 217
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 72/169 (42%), Gaps = 12/169 (7%)
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN----- 147
A +A+ +E+ K ++ DL A +L ++ FGL ++ +Y
Sbjct: 178 AYQVAKGMEFLEFKS-CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARL 236
Query: 148 -LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSAL 205
+ + PE + G T +S V+S+G +L ++ S G + P +D NF L+ +
Sbjct: 237 PVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD----ANFYKLIQNGF 292
Query: 206 EGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSY 254
+ E+ + C ++R+RP+ +L L +AE Y
Sbjct: 293 KMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEEAMY 341
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 11/99 (11%)
Query: 92 VALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-----NSRDGKS 143
V +Y+ + ALE+ G +Y D+ IL D +G+ L+ FGL K +
Sbjct: 161 VQIYVGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYD 219
Query: 144 YSTNLAFTPPEYMRTGRVTPESVV--YSFGTMLLDLLSG 180
+ + + P+ +R G + V +S G ++ +LL+G
Sbjct: 220 FCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Query: 96 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS---YSTNLAFTP 152
+ A++YC K ++ DL A +L D D N +++ FG G + + +
Sbjct: 122 IVSAVQYCHQKF-IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAA 180
Query: 153 PEYMRTGRVT-PESVVYSFGTMLLDLLSG 180
PE + + PE V+S G +L L+SG
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 12/100 (12%)
Query: 94 LYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNS-RDG---KSYST 146
YLA+ AL + KG +Y DL I+ + G+ +L+ FGL K S DG +
Sbjct: 125 FYLAEISMALGHLHQKG-IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCG 183
Query: 147 NLAFTPPEY-MRTGRVTPESVVYSFGTMLLDLLSGKHIPP 185
+ + PE MR+G +S G ++ D+L+G PP
Sbjct: 184 TIEYMAPEILMRSGHNRAVD-WWSLGALMYDMLTGA--PP 220
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Query: 96 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP--- 152
+ A++YC K ++ DL A +L D D N +++ FG G P
Sbjct: 122 IVSAVQYCHQKF-IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAA 180
Query: 153 PEYMRTGRVT-PESVVYSFGTMLLDLLSG 180
PE + + PE V+S G +L L+SG
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 68/169 (40%), Gaps = 11/169 (6%)
Query: 18 KSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77
K ++ ++ T+ E++ + N R L L D V E+ L F
Sbjct: 45 KEVIIAKDEVAHTVT--ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FF 99
Query: 78 HWETQPMKWAMRLRV-ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136
H + + R R + ALEY S+ +Y D+ ++ DKDG+ +++ FGL K
Sbjct: 100 HLSRERVFTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCK 158
Query: 137 NS-RDG---KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGK 181
DG K + + PE + + G ++ +++ G+
Sbjct: 159 EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 80/189 (42%), Gaps = 34/189 (17%)
Query: 18 KSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERL-LVAEFMPNETLAKHL 76
K V++ D+ T+ E + + L + C++ +RL V E++ L H+
Sbjct: 54 KDVVIQDDDVECTMV--EKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHI 111
Query: 77 FHW----ETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSF 132
E Q + +A + + L+ K +Y DL ++ D +G+ +++ F
Sbjct: 112 QQVGKFKEPQAVFYAAEISIGLFFLH-------KRGIIYRDLKLDNVMLDSEGHIKIADF 164
Query: 133 GLMK-NSRDGKSYSTNLAFTPPEYMRTGRVTPESVVY----------SFGTMLLDLLSGK 181
G+ K + DG +T P+Y + PE + Y ++G +L ++L+G+
Sbjct: 165 GMCKEHMMDG--VTTREFCGTPDY-----IAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQ 217
Query: 182 HIPPSHALD 190
PP D
Sbjct: 218 --PPFDGED 224
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 99 ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA---FTPPEY 155
A+EYC + + ++ DL +L D + N +++ FGL DG T+ + PE
Sbjct: 120 AIEYCH-RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV 178
Query: 156 MRTGRVT--PESVVYSFGTMLLDLLSGK 181
+ G++ PE V+S G +L +L G+
Sbjct: 179 I-NGKLYAGPEVDVWSCGIVLYVMLVGR 205
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 68/169 (40%), Gaps = 11/169 (6%)
Query: 18 KSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77
K ++ ++ T+ E++ + N R L L D V E+ L F
Sbjct: 40 KEVIIAKDEVAHTVT--ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FF 94
Query: 78 HWETQPMKWAMRLRV-ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136
H + + R R + ALEY S+ +Y D+ ++ DKDG+ +++ FGL K
Sbjct: 95 HLSRERVFTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCK 153
Query: 137 NS-RDG---KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGK 181
DG K + + PE + + G ++ +++ G+
Sbjct: 154 EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 68/169 (40%), Gaps = 11/169 (6%)
Query: 18 KSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77
K ++ ++ T+ E++ + N R L L D V E+ L F
Sbjct: 40 KEVIIAKDEVAHTVT--ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FF 94
Query: 78 HWETQPMKWAMRLRV-ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136
H + + R R + ALEY S+ +Y D+ ++ DKDG+ +++ FGL K
Sbjct: 95 HLSRERVFTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCK 153
Query: 137 NS-RDG---KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGK 181
DG K + + PE + + G ++ +++ G+
Sbjct: 154 EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 68/169 (40%), Gaps = 11/169 (6%)
Query: 18 KSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77
K ++ ++ T+ E++ + N R L L D V E+ L F
Sbjct: 40 KEVIIAKDEVAHTVT--ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FF 94
Query: 78 HWETQPMKWAMRLRV-ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK 136
H + + R R + ALEY S+ +Y D+ ++ DKDG+ +++ FGL K
Sbjct: 95 HLSRERVFTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCK 153
Query: 137 NS-RDG---KSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGK 181
DG K + + PE + + G ++ +++ G+
Sbjct: 154 EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 68/161 (42%), Gaps = 14/161 (8%)
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN-------SRDGKSYS 145
+ +A+ +E+ +S+ + ++ DL A IL + ++ FGL ++ R G +
Sbjct: 154 SFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA-R 211
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSA 204
L + PE + T +S V+SFG +L ++ S G P +D + F +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFCRRLKEG 267
Query: 205 LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245
+ E+ + C E +RP LV L +L
Sbjct: 268 TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 17/105 (16%)
Query: 90 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA 149
L + + +A+A+E+ SKG ++ DL I F D ++ FGL+ + T L
Sbjct: 167 LHIFIQIAEAVEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 225
Query: 150 FTPPEYMRTGRV------TPESV----------VYSFGTMLLDLL 178
P G+V +PE + ++S G +L +LL
Sbjct: 226 PMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 68/161 (42%), Gaps = 14/161 (8%)
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN-------SRDGKSYS 145
+ +A+ +E+ +S+ + ++ DL A IL + ++ FGL ++ R G +
Sbjct: 154 SFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDA-R 211
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSA 204
L + PE + T +S V+SFG +L ++ S G P +D + F +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFCRRLKEG 267
Query: 205 LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245
+ E+ + C E +RP LV L +L
Sbjct: 268 TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 36.2 bits (82), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 68/161 (42%), Gaps = 14/161 (8%)
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN-------SRDGKSYS 145
+ +A+ +E+ +S+ + ++ DL A IL + ++ FGL ++ R G +
Sbjct: 145 SFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA-R 202
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSA 204
L + PE + T +S V+SFG +L ++ S G P +D + F +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFCRRLKEG 258
Query: 205 LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245
+ E+ + C E +RP LV L +L
Sbjct: 259 TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 68/161 (42%), Gaps = 14/161 (8%)
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN-------SRDGKSYS 145
+ +A+ +E+ +S+ + ++ DL A IL + ++ FGL ++ R G +
Sbjct: 145 SFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA-R 202
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSA 204
L + PE + T +S V+SFG +L ++ S G P +D + F +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFCRRLKEG 258
Query: 205 LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245
+ E+ + C E +RP LV L +L
Sbjct: 259 TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 68/161 (42%), Gaps = 14/161 (8%)
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN-------SRDGKSYS 145
+ +A+ +E+ +S+ + ++ DL A IL + ++ FGL ++ R G +
Sbjct: 154 SFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA-R 211
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSA 204
L + PE + T +S V+SFG +L ++ S G P +D + F +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFCRRLKEG 267
Query: 205 LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245
+ E+ + C E +RP LV L +L
Sbjct: 268 TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 99 ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL-MKNSRDGK---SYSTNLAFTPPE 154
AL Y + ++ DL A ILF DG+ +L+ FG+ KN+R + S+ + PE
Sbjct: 147 ALNYLHD-NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPE 205
Query: 155 YM--RTGRVTP---ESVVYSFGTMLLDLLSGKHIPPSHALDLIR 193
+ T + P ++ V+S G L+++ + PP H L+ +R
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEMAEIE--PPHHELNPMR 247
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 99 ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL-MKNSRDGK---SYSTNLAFTPPE 154
AL Y + ++ DL A ILF DG+ +L+ FG+ KN+R + S+ + PE
Sbjct: 147 ALNYLHD-NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPE 205
Query: 155 YM--RTGRVTP---ESVVYSFGTMLLDLLSGKHIPPSHALDLIR 193
+ T + P ++ V+S G L+++ + PP H L+ +R
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEMAEIE--PPHHELNPMR 247
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 83/202 (41%), Gaps = 48/202 (23%)
Query: 33 LEEAKAVGNL-RSERLANLIGCCYEADERLLVAEF------------------------M 67
+ E K + +L + E + NL+G C L++ E+ +
Sbjct: 97 MSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAI 156
Query: 68 PNETLA-KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGN 126
N TL+ + L H+ +Q +AQ + + +SK ++ D+ A +L
Sbjct: 157 ANSTLSTRDLLHFSSQ-------------VAQGMAFLASK-NCIHRDVAARNVLLTNGHV 202
Query: 127 PRLSSFGLMKNSRDGKSYSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSG 180
++ FGL ++ + +Y + + PE + T +S V+S+G +L ++ S
Sbjct: 203 AKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSL 262
Query: 181 KHIPPSHALDLIRSKNFLLLMD 202
P + L+ SK + L+ D
Sbjct: 263 GLNP--YPGILVNSKFYKLVKD 282
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 11/84 (13%)
Query: 59 ERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSS--------KGRAL 110
E LLV E+ PN +L K+L W R+A + + L Y + K
Sbjct: 86 EYLLVMEYYPNGSLXKYL---SLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAIS 142
Query: 111 YHDLNAYRILFDKDGNPRLSSFGL 134
+ DLN+ +L DG +S FGL
Sbjct: 143 HRDLNSRNVLVKNDGTCVISDFGL 166
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 35.8 bits (81), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 91/216 (42%), Gaps = 17/216 (7%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L EA +G + +L G + +++ E+M N +L L ++ + V
Sbjct: 57 LSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL---RKNDGRFTVIQLV 113
Query: 93 ALY--LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTN- 147
+ + ++Y S ++ DL A IL + + ++S FG+ + D +Y+T
Sbjct: 114 GMLRGIGSGMKYLSDMS-YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRG 172
Query: 148 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 203
+ +T PE + + T S V+S+G ++ +++S P + +++ + ++
Sbjct: 173 GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD----MSNQDVIKAIEE 228
Query: 204 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 239
D L +L C Q E +RP +V
Sbjct: 229 GYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIV 264
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 35.4 bits (80), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 68/161 (42%), Gaps = 14/161 (8%)
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN-------SRDGKSYS 145
+ +A+ +E+ +S+ + ++ DL A IL + ++ FGL ++ R G +
Sbjct: 154 SFQVAKGMEFLASR-KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA-R 211
Query: 146 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSA 204
L + PE + T +S V+SFG +L ++ S G P +D + F +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFCRRLKEG 267
Query: 205 LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 245
+ E+ + C E +RP LV L +L
Sbjct: 268 TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 23/160 (14%)
Query: 35 EAKAVGNLRSERLANLIGCCYEA--DERLLVAEFMPNETLAKHLFHWETQPMKWAMRL-- 90
E + + L S+ + G Y E LV E++P+ L L + RL
Sbjct: 58 EIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFL-------QRHRARLDA 110
Query: 91 -RVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-- 144
R+ LY +Q +EY S+ R ++ DL A IL + + + +++ FGL K K
Sbjct: 111 SRLLLYSSQICKGMEYLGSR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXV 169
Query: 145 -----STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS 179
+ + + PE + + +S V+SFG +L +L +
Sbjct: 170 VREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 71/156 (45%), Gaps = 13/156 (8%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRV 92
L EA +G + +L G + +++ E+M N +L L ++ + V
Sbjct: 63 LSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL---RKNDGRFTVIQLV 119
Query: 93 ALY--LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTN- 147
+ + ++Y S ++ DL A IL + + ++S FG+ + D +Y+T
Sbjct: 120 GMLRGIGSGMKYLSDMS-YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRG 178
Query: 148 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS 179
+ +T PE + + T S V+S+G ++ +++S
Sbjct: 179 GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 64/155 (41%), Gaps = 15/155 (9%)
Query: 41 NLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALY---LA 97
N++ L L AD+ V +++ L HL Q + + R Y +A
Sbjct: 95 NVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHL-----QRERCFLEPRARFYAAEIA 149
Query: 98 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----P 153
AL Y S +Y DL IL D G+ L+ FGL K + + S ++ TP P
Sbjct: 150 SALGYLHSLN-IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAP 208
Query: 154 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHA 188
E + + G +L ++L G +PP ++
Sbjct: 209 EVLHKQPYDRTVDWWCLGAVLYEMLYG--LPPFYS 241
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/130 (20%), Positives = 55/130 (42%), Gaps = 8/130 (6%)
Query: 35 EAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVAL 94
E + + ++++E G DE ++ E+M N+++ K ++ + + + +
Sbjct: 93 ELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQV 152
Query: 95 Y------LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST-- 146
+ + Y ++ + D+ IL DK+G +LS FG + D K +
Sbjct: 153 IKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRG 212
Query: 147 NLAFTPPEYM 156
F PPE+
Sbjct: 213 TYEFMPPEFF 222
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 35.4 bits (80), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 62/157 (39%), Gaps = 14/157 (8%)
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAF 150
++A+ + +ALE+ SK ++ D+ +L + G + FG+ D + +
Sbjct: 140 KIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGC 199
Query: 151 TPPEYMRTGRVTPE---------SVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM 201
P Y R+ PE S ++S G ++L + S + K +
Sbjct: 200 KP--YXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEP 257
Query: 202 DSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 238
L ++ E V S+CL+ ++ERP L
Sbjct: 258 SPQLP---ADKFSAEFVDFTSQCLKKNSKERPTYPEL 291
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 110 LYHDLNAYRILFDKDGNPRLSSFG-LMKNSRDGKSYSTNLAFTP----PEYMRT-----G 159
++ D+ IL D +G+ RL+ FG +K DG S+ TP PE ++ G
Sbjct: 197 VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKG 256
Query: 160 RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS 194
R PE +S G + ++L G+ P +A L+ +
Sbjct: 257 RYGPECDWWSLGVCMYEMLYGE--TPFYAESLVET 289
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 66/150 (44%), Gaps = 12/150 (8%)
Query: 42 LRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALE 101
L + + ++I E D LV E++ TL++++ P+ + + ++
Sbjct: 68 LSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI--ESHGPLSVDTAINFTNQILDGIK 125
Query: 102 YCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-----LAFTPPEYM 156
+ R ++ D+ IL D + ++ FG+ K + TN + + PE
Sbjct: 126 HAHDM-RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQA 184
Query: 157 RTGRVTPE-SVVYSFGTMLLDLLSGKHIPP 185
+ G T E + +YS G +L ++L G+ PP
Sbjct: 185 K-GEATDECTDIYSIGIVLYEMLVGE--PP 211
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 35.0 bits (79), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 13/105 (12%)
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA- 149
R+ + A++YC + ++ DL +L D N +++ FGL DG+ +
Sbjct: 115 RLFQQILSAVDYCH-RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGS 173
Query: 150 --FTPPEYMRTGRV--TPESVVYSFGTMLLDLLSG------KHIP 184
+ PE + +GR+ PE ++S G +L LL G +H+P
Sbjct: 174 PNYAAPEVI-SGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP 217
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 35.0 bits (79), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 12/104 (11%)
Query: 99 ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL-MKNSRDGKSYSTNLA---FTPPE 154
AL Y + ++ DL A ILF DG+ +L+ FG+ KN+R + + + PE
Sbjct: 147 ALNYLHD-NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPE 205
Query: 155 YM--RTGRVTP---ESVVYSFGTMLLDLLSGKHIPPSHALDLIR 193
+ T + P ++ V+S G L+++ + PP H L+ +R
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEMAEIE--PPHHELNPMR 247
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 35.0 bits (79), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 85/199 (42%), Gaps = 31/199 (15%)
Query: 33 LEEAKAVGNL-RSERLANLIGCCYEADERLLVAEF----------------MPNETLA-- 73
+ E K + +L + E + NL+G C L++ E+ M +LA
Sbjct: 82 MSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPG 141
Query: 74 ---KHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLS 130
+ L + +P++ L + +AQ + + +SK ++ D+ A +L ++
Sbjct: 142 QDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASK-NCIHRDVAARNVLLTNGHVAKIG 200
Query: 131 SFGLMKNSRDGKSYSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
FGL ++ + +Y + + PE + T +S V+S+G +L ++ S P
Sbjct: 201 DFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP 260
Query: 185 PSHALDLIRSKNFLLLMDS 203
+ L+ SK + L+ D
Sbjct: 261 --YPGILVNSKFYKLVKDG 277
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 35.0 bits (79), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 93/224 (41%), Gaps = 32/224 (14%)
Query: 47 LANLIGCCYEADERLLVAEFMPNETLAKHLFH---WETQP-----------MKWAMRLRV 92
+ NL+G C L E+ P+ L L ET P + L
Sbjct: 78 IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 137
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-STNLAFT 151
A +A+ ++Y S K + ++ DL A IL ++ +++ FGL SR + Y +
Sbjct: 138 AADVARGMDYLSQK-QFIHRDLAARNILVGENYVAKIADFGL---SRGQEVYVKKTMGRL 193
Query: 152 PPEYMRTGRV-----TPESVVYSFGTMLLDLLSGKHIP--PSHALDLIRSKNFLLLMDSA 204
P +M + T S V+S+G +L +++S P +L L
Sbjct: 194 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK----LPQGYR 249
Query: 205 LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248
LE + D+ E+ L +C + + ERP+ +++SL + +E
Sbjct: 250 LEKPLNCDD--EVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 291
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 34.7 bits (78), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 44/95 (46%), Gaps = 12/95 (12%)
Query: 110 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYMR----------TG 159
++ D+ +L D +G+ RL+ FG D + +++A P+Y+ G
Sbjct: 197 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 256
Query: 160 RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS 194
+ PE +S G + ++L G+ P +A L+ +
Sbjct: 257 KYGPECDWWSLGVCMYEMLYGE--TPFYAESLVET 289
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 34.7 bits (78), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 93/224 (41%), Gaps = 32/224 (14%)
Query: 47 LANLIGCCYEADERLLVAEFMPNETLAKHLFH---WETQP-----------MKWAMRLRV 92
+ NL+G C L E+ P+ L L ET P + L
Sbjct: 88 IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 147
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-STNLAFT 151
A +A+ ++Y S K + ++ DL A IL ++ +++ FGL SR + Y +
Sbjct: 148 AADVARGMDYLSQK-QFIHRDLAARNILVGENYVAKIADFGL---SRGQEVYVKKTMGRL 203
Query: 152 PPEYMRTGRV-----TPESVVYSFGTMLLDLLSGKHIP--PSHALDLIRSKNFLLLMDSA 204
P +M + T S V+S+G +L +++S P +L L
Sbjct: 204 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK----LPQGYR 259
Query: 205 LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248
LE + D+ E+ L +C + + ERP+ +++SL + +E
Sbjct: 260 LEKPLNCDD--EVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 301
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 34.7 bits (78), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 44/95 (46%), Gaps = 12/95 (12%)
Query: 110 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYMR----------TG 159
++ D+ +L D +G+ RL+ FG D + +++A P+Y+ G
Sbjct: 213 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 272
Query: 160 RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS 194
+ PE +S G + ++L G+ P +A L+ +
Sbjct: 273 KYGPECDWWSLGVCMYEMLYGE--TPFYAESLVET 305
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 34.7 bits (78), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 82/190 (43%), Gaps = 24/190 (12%)
Query: 33 LEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKHLFH----WETQPMKWA 87
+ E K + +L + E + NL+G C L++ E+ L L ET P +A
Sbjct: 97 MSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDP-AFA 155
Query: 88 MR---------LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNS 138
+ L + +AQ + + +SK ++ D+ A +L ++ FGL ++
Sbjct: 156 IANSTASTRDLLHFSSQVAQGMAFLASK-NCIHRDVAARNVLLTNGHVAKIGDFGLARDI 214
Query: 139 RDGKSYSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLI 192
+ +Y + + PE + T +S V+S+G +L ++ S P + L+
Sbjct: 215 MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP--YPGILV 272
Query: 193 RSKNFLLLMD 202
SK + L+ D
Sbjct: 273 NSKFYKLVKD 282
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 97/234 (41%), Gaps = 36/234 (15%)
Query: 62 LVAEFMPNETLAKHLFHWETQPMKWAMRLRVALY-LAQALEYCSSKGRALYHDLNAYRIL 120
LV E++ N T K L+ T +R +Y L +AL+YC SKG ++ D+ + ++
Sbjct: 112 LVFEYI-NNTDFKQLYQILTD-----FDIRFYMYELLKALDYCHSKG-IMHRDVKPHNVM 164
Query: 121 FDKDGNP-RLSSFGLMKNSRDGKSYSTNLA---FTPPEYMRTGRVTPESV-VYSFGTMLL 175
D RL +GL + + Y+ +A F PE + ++ S+ ++S G ML
Sbjct: 165 IDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 224
Query: 176 DLLSGKHIPPSHALD----LIRSKN---------FLLLMDSALEGHFSNDEGTELVRLAS 222
++ + P H D L+R +L L+ HF++ G +
Sbjct: 225 SMIFRRE-PFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLDPHFNDILGQHSRKRWE 283
Query: 223 RCLQSEARE--RPNAKSLVISLMSLQ-------KEAEVPSYVLLGIQHETAPST 267
+ SE R P A L+ L+ KEA Y ++ ++ PS
Sbjct: 284 NFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYFYPVVKEQSQPSA 337
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 80/191 (41%), Gaps = 24/191 (12%)
Query: 33 LEEAKAVGNL-RSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQPMKWAMR-- 89
+ E K + +L + E + NL+G C L++ E+ L L ++++
Sbjct: 97 MSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPS 156
Query: 90 ------------LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN 137
L + +AQ + + +SK ++ D+ A +L ++ FGL ++
Sbjct: 157 HNPEEQLSSRDLLHFSSQVAQGMAFLASK-NCIHRDVAARNVLLTNGHVAKIGDFGLARD 215
Query: 138 SRDGKSYSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDL 191
+ +Y + + PE + T +S V+S+G +L ++ S P + L
Sbjct: 216 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP--YPGIL 273
Query: 192 IRSKNFLLLMD 202
+ SK + L+ D
Sbjct: 274 VNSKFYKLVKD 284
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 73/164 (44%), Gaps = 17/164 (10%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ--PMKWAMRL 90
L EA +G + L G + +++ EFM N L L + Q ++ L
Sbjct: 63 LSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGML 122
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK----NSRDGKSYST 146
R +A + Y + ++ DL A IL + + ++S FGL + NS D +Y++
Sbjct: 123 R---GIASGMRYLAEMS-YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSD-PTYTS 177
Query: 147 NLA------FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+L +T PE + + T S +S+G ++ +++S P
Sbjct: 178 SLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP 221
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 13/105 (12%)
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA- 149
R+ + ++YC + ++ DL +L D N +++ FGL DG+ +
Sbjct: 120 RLFQQILSGVDYCH-RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGS 178
Query: 150 --FTPPEYMRTGRVT--PESVVYSFGTMLLDLLSG------KHIP 184
+ PE + +GR+ PE ++S G +L LL G H+P
Sbjct: 179 PNYAAPEVI-SGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP 222
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 13/123 (10%)
Query: 62 LVAEFMPNETLAKHLFHWETQPMKWAMRLRVALY-LAQALEYCSSKGRALYHDLNAYRIL 120
LV E++ N T K L+ T +R +Y L +AL+YC SKG ++ D+ + ++
Sbjct: 117 LVFEYI-NNTDFKQLYQILTD-----FDIRFYMYELLKALDYCHSKG-IMHRDVKPHNVM 169
Query: 121 FDKDGNP-RLSSFGLMKNSRDGKSYSTNLA---FTPPEYMRTGRVTPESV-VYSFGTMLL 175
D RL +GL + + Y+ +A F PE + ++ S+ ++S G ML
Sbjct: 170 IDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 229
Query: 176 DLL 178
++
Sbjct: 230 SMI 232
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 93/224 (41%), Gaps = 32/224 (14%)
Query: 47 LANLIGCCYEADERLLVAEFMPNETLAKHLFH---WETQP-----------MKWAMRLRV 92
+ NL+G C L E+ P+ L L ET P + L
Sbjct: 85 IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 144
Query: 93 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-STNLAFT 151
A +A+ ++Y S K + ++ +L A IL ++ +++ FGL SR + Y +
Sbjct: 145 AADVARGMDYLSQK-QFIHRNLAARNILVGENYVAKIADFGL---SRGQEVYVKKTMGRL 200
Query: 152 PPEYMRTGRV-----TPESVVYSFGTMLLDLLSGKHIP--PSHALDLIRSKNFLLLMDSA 204
P +M + T S V+S+G +L +++S P +L L
Sbjct: 201 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK----LPQGYR 256
Query: 205 LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 248
LE + D+ E+ L +C + + ERP+ +++SL + +E
Sbjct: 257 LEKPLNCDD--EVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 298
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 15/163 (9%)
Query: 33 LEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLFHWETQ--PMKWAMRL 90
L EA +G + L G + +++ EFM N L L + Q ++ L
Sbjct: 65 LSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGML 124
Query: 91 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK----NSRDGKSYST 146
R +A + Y + ++ DL A IL + + ++S FGL + NS D S+
Sbjct: 125 R---GIASGMRYLAEMS-YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSS 180
Query: 147 -----NLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 184
+ +T PE + + T S +S+G ++ +++S P
Sbjct: 181 LGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP 223
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 68/160 (42%), Gaps = 26/160 (16%)
Query: 17 LKSSVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEA--------DERLLVAEFM 67
LK ++E+ G + L E K + L+ E + NLI C LV +F
Sbjct: 47 LKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFC 106
Query: 68 PNET---LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD 124
++ L+ L + +K M++ L L Y + + L+ D+ A +L +D
Sbjct: 107 EHDLAGLLSNVLVKFTLSEIKRVMQM-----LLNGLYYIH-RNKILHRDMKAANVLITRD 160
Query: 125 GNPRLSSFG------LMKNSRDGKSYS--TNLAFTPPEYM 156
G +L+ FG L KNS+ + + L + PPE +
Sbjct: 161 GVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELL 200
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 68/160 (42%), Gaps = 26/160 (16%)
Query: 17 LKSSVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEA--------DERLLVAEFM 67
LK ++E+ G + L E K + L+ E + NLI C LV +F
Sbjct: 48 LKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFC 107
Query: 68 PNET---LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD 124
++ L+ L + +K M++ L L Y + + L+ D+ A +L +D
Sbjct: 108 EHDLAGLLSNVLVKFTLSEIKRVMQM-----LLNGLYYIH-RNKILHRDMKAANVLITRD 161
Query: 125 GNPRLSSFG------LMKNSRDGKSYS--TNLAFTPPEYM 156
G +L+ FG L KNS+ + + L + PPE +
Sbjct: 162 GVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELL 201
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 68/160 (42%), Gaps = 26/160 (16%)
Query: 17 LKSSVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEA--------DERLLVAEFM 67
LK ++E+ G + L E K + L+ E + NLI C LV +F
Sbjct: 48 LKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFC 107
Query: 68 PNET---LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD 124
++ L+ L + +K M++ L L Y + + L+ D+ A +L +D
Sbjct: 108 EHDLAGLLSNVLVKFTLSEIKRVMQM-----LLNGLYYIH-RNKILHRDMKAANVLITRD 161
Query: 125 GNPRLSSFG------LMKNSRDGKSYS--TNLAFTPPEYM 156
G +L+ FG L KNS+ + + L + PPE +
Sbjct: 162 GVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELL 201
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 32.3 bits (72), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 68/160 (42%), Gaps = 26/160 (16%)
Query: 17 LKSSVLESSDLGETLN-LEEAKAVGNLRSERLANLIGCCYEADERL--------LVAEFM 67
LK ++E+ G + L E K + L+ E + NLI C LV +F
Sbjct: 48 LKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFC 107
Query: 68 PNET---LAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKD 124
++ L+ L + +K M++ L L Y + + L+ D+ A +L +D
Sbjct: 108 EHDLAGLLSNVLVKFTLSEIKRVMQM-----LLNGLYYIH-RNKILHRDMKAANVLITRD 161
Query: 125 GNPRLSSFG------LMKNSRDGKSYS--TNLAFTPPEYM 156
G +L+ FG L KNS+ + + L + PPE +
Sbjct: 162 GVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELL 201
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 96 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST------NLA 149
+A +EY SS ++ DL +L N ++S GL + Y +
Sbjct: 154 IAAGMEYLSSH-HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIR 212
Query: 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLS 179
+ PE + G+ + +S ++S+G +L ++ S
Sbjct: 213 WMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 32.3 bits (72), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 96 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST------NLA 149
+A +EY SS ++ DL +L N ++S GL + Y +
Sbjct: 137 IAAGMEYLSSH-HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIR 195
Query: 150 FTPPEYMRTGRVTPESVVYSFGTMLLDLLS 179
+ PE + G+ + +S ++S+G +L ++ S
Sbjct: 196 WMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 32.0 bits (71), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 80/202 (39%), Gaps = 20/202 (9%)
Query: 18 KSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77
K V++ + TLN E + + + L L + +V E+MP + HL
Sbjct: 76 KQKVVKLKQIEHTLN--EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHL- 132
Query: 78 HWETQPMKWAMRLRVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL 134
+ + Y AQ EY S +Y DL +L D+ G +++ FG
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIKVADFGF 187
Query: 135 MKNSRDGKSYSTNLAFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALD 190
K + G+++ L TP PE + + ++ G ++ ++ +G PP A
Sbjct: 188 AKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQ 242
Query: 191 LIRSKNFLLLMDSALEGHFSND 212
I+ ++ HFS+D
Sbjct: 243 PIQIYEKIVSGKVRFPSHFSSD 264
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 32.0 bits (71), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 80/202 (39%), Gaps = 20/202 (9%)
Query: 18 KSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77
K V++ + TLN E + + + L L + +V E+MP + HL
Sbjct: 76 KQKVVKLKQIEHTLN--EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHL- 132
Query: 78 HWETQPMKWAMRLRVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL 134
+ + Y AQ EY S +Y DL +L D+ G +++ FG
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIKVADFGF 187
Query: 135 MKNSRDGKSYSTNLAFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALD 190
K + G+++ L TP PE + + ++ G ++ ++ +G PP A
Sbjct: 188 AKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQ 242
Query: 191 LIRSKNFLLLMDSALEGHFSND 212
I+ ++ HFS+D
Sbjct: 243 PIQIYEKIVSGKVRFPSHFSSD 264
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 31.6 bits (70), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 9/107 (8%)
Query: 110 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPES 165
+Y DL +L D+ G +++ FG K + G+++ LA TP PE + +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LAGTPEYLAPEIILSKGYNKAV 219
Query: 166 VVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212
++ G ++ ++ +G PP A I+ ++ HFS+D
Sbjct: 220 DWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSD 264
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 81/202 (40%), Gaps = 20/202 (9%)
Query: 18 KSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77
K V++ + TLN E + + + L L + +V E++P + HL
Sbjct: 62 KQKVVKLKQIEHTLN--EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL- 118
Query: 78 HWETQPMKWAMRLRVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL 134
+ + Y AQ EY S +Y DL +L D+ G +++ FG
Sbjct: 119 ----RRIGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGF 173
Query: 135 MKNSRDGKSYSTNLAFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALD 190
K + G++++ L TP PE + + ++ G ++ ++ +G PP A
Sbjct: 174 AKRVK-GRTWT--LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQ 228
Query: 191 LIRSKNFLLLMDSALEGHFSND 212
I+ ++ HFS+D
Sbjct: 229 PIQIYEKIVSGKVRFPSHFSSD 250
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 81/202 (40%), Gaps = 20/202 (9%)
Query: 18 KSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77
K V++ + TLN E + + + L L + +V E++P + HL
Sbjct: 77 KQKVVKLKQIEHTLN--EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL- 133
Query: 78 HWETQPMKWAMRLRVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL 134
+ + Y AQ EY S +Y DL +L D+ G +++ FG
Sbjct: 134 ----RRIGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGF 188
Query: 135 MKNSRDGKSYSTNLAFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALD 190
K + G++++ L TP PE + + ++ G ++ ++ +G PP A
Sbjct: 189 AKRVK-GRTWT--LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQ 243
Query: 191 LIRSKNFLLLMDSALEGHFSND 212
I+ ++ HFS+D
Sbjct: 244 PIQIYEKIVSGKVRFPSHFSSD 265
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 49/107 (45%), Gaps = 9/107 (8%)
Query: 110 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPES 165
+Y DL ++ D+ G +++ FGL K + G+++ L TP PE + +
Sbjct: 163 IYRDLKPENLMIDQQGYIKVTDFGLAKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAV 219
Query: 166 VVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212
++ G ++ ++ +G PP A I+ ++ HFS+D
Sbjct: 220 DWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSD 264
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 80/202 (39%), Gaps = 20/202 (9%)
Query: 18 KSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77
K V++ + TLN E + + + L L + +V E++P + HL
Sbjct: 77 KQKVVKLKQIEHTLN--EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL- 133
Query: 78 HWETQPMKWAMRLRVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL 134
+ + Y AQ EY S +Y DL +L D+ G +++ FG
Sbjct: 134 ----RRIGRFXEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGF 188
Query: 135 MKNSRDGKSYSTNLAFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALD 190
K + G+++ L TP PE + + ++ G ++ ++ +G PP A
Sbjct: 189 AKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQ 243
Query: 191 LIRSKNFLLLMDSALEGHFSND 212
I+ ++ HFS+D
Sbjct: 244 PIQIYEKIVSGKVRFPSHFSSD 265
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 80/202 (39%), Gaps = 20/202 (9%)
Query: 18 KSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77
K V++ + TLN E + + + L L + +V E++P + HL
Sbjct: 76 KQKVVKLKQIEHTLN--EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL- 132
Query: 78 HWETQPMKWAMRLRVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL 134
+ + Y AQ EY S +Y DL +L D+ G +++ FG
Sbjct: 133 ----RRIGRFXEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 135 MKNSRDGKSYSTNLAFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALD 190
K + G+++ L TP PE + + ++ G ++ ++ +G PP A
Sbjct: 188 AKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQ 242
Query: 191 LIRSKNFLLLMDSALEGHFSND 212
I+ ++ HFS+D
Sbjct: 243 PIQIYEKIVSGKVRFPSHFSSD 264
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 80/202 (39%), Gaps = 20/202 (9%)
Query: 18 KSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77
K V++ + TLN E + + + L L + +V E++P + HL
Sbjct: 76 KQKVVKLKQIEHTLN--EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL- 132
Query: 78 HWETQPMKWAMRLRVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL 134
+ + Y AQ EY S +Y DL +L D+ G +++ FG
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIKVADFGF 187
Query: 135 MKNSRDGKSYSTNLAFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALD 190
K + G+++ L TP PE + + ++ G ++ ++ +G PP A
Sbjct: 188 AKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQ 242
Query: 191 LIRSKNFLLLMDSALEGHFSND 212
I+ ++ HFS+D
Sbjct: 243 PIQIYEKIVSGKVRFPSHFSSD 264
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 80/202 (39%), Gaps = 20/202 (9%)
Query: 18 KSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77
K V++ + TLN E + + + L L + +V E++P + HL
Sbjct: 76 KQKVVKLKQIEHTLN--EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL- 132
Query: 78 HWETQPMKWAMRLRVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL 134
+ + Y AQ EY S +Y DL +L D+ G +++ FG
Sbjct: 133 ----RRIGRFXEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 135 MKNSRDGKSYSTNLAFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALD 190
K + G+++ L TP PE + + ++ G ++ ++ +G PP A
Sbjct: 188 AKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQ 242
Query: 191 LIRSKNFLLLMDSALEGHFSND 212
I+ ++ HFS+D
Sbjct: 243 PIQIYEKIVSGKVRFPSHFSSD 264
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 80/202 (39%), Gaps = 20/202 (9%)
Query: 18 KSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77
K V++ + TLN E + + + L L + +V E++P + HL
Sbjct: 69 KQKVVKLKQIEHTLN--EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL- 125
Query: 78 HWETQPMKWAMRLRVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL 134
+ + Y AQ EY S +Y DL +L D+ G +++ FG
Sbjct: 126 ----RRIGRFXEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGF 180
Query: 135 MKNSRDGKSYSTNLAFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALD 190
K + G+++ L TP PE + + ++ G ++ ++ +G PP A
Sbjct: 181 AKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQ 235
Query: 191 LIRSKNFLLLMDSALEGHFSND 212
I+ ++ HFS+D
Sbjct: 236 PIQIYEKIVSGKVRFPSHFSSD 257
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 49/107 (45%), Gaps = 9/107 (8%)
Query: 110 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPES 165
+Y DL +L D+ G +++ FG K + G+++ L TP PE + +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAV 219
Query: 166 VVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212
++ G ++ ++ +G PP A + I+ ++ HFS+D
Sbjct: 220 DWWALGVLIYEMAAG--YPPFFADEPIQIYEKIVSGKVRFPSHFSSD 264
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 110 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPES 165
+Y DL +L D+ G +++ FG K + G+++ L TP PE + +
Sbjct: 164 IYRDLKPENLLIDQQGYIKVADFGFAKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAV 220
Query: 166 VVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212
++ G ++ ++ +G PP A I+ ++ HFS+D
Sbjct: 221 DWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSD 265
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 49/107 (45%), Gaps = 9/107 (8%)
Query: 110 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPES 165
+Y DL ++ D+ G +++ FGL K + G+++ L TP PE + +
Sbjct: 163 IYRDLKPENLMIDQQGYIQVTDFGLAKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAV 219
Query: 166 VVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212
++ G ++ ++ +G PP A I+ ++ HFS+D
Sbjct: 220 DWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSD 264
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 80/202 (39%), Gaps = 20/202 (9%)
Query: 18 KSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77
K V++ + TLN E + + + L L + +V E++P + HL
Sbjct: 97 KQKVVKLKQIEHTLN--EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL- 153
Query: 78 HWETQPMKWAMRLRVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL 134
+ + Y AQ EY S +Y DL +L D+ G +++ FG
Sbjct: 154 ----RRIGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGF 208
Query: 135 MKNSRDGKSYSTNLAFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALD 190
K + G+++ L TP PE + + ++ G ++ ++ +G PP A
Sbjct: 209 AKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQ 263
Query: 191 LIRSKNFLLLMDSALEGHFSND 212
I+ ++ HFS+D
Sbjct: 264 PIQIYEKIVSGKVRFPSHFSSD 285
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 80/202 (39%), Gaps = 20/202 (9%)
Query: 18 KSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77
K V++ + TLN E + + + L L + +V E++P + HL
Sbjct: 77 KQKVVKLKQIEHTLN--EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL- 133
Query: 78 HWETQPMKWAMRLRVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL 134
+ + Y AQ EY S +Y DL +L D+ G +++ FG
Sbjct: 134 ----RRIGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGF 188
Query: 135 MKNSRDGKSYSTNLAFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALD 190
K + G+++ L TP PE + + ++ G ++ ++ +G PP A
Sbjct: 189 AKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQ 243
Query: 191 LIRSKNFLLLMDSALEGHFSND 212
I+ ++ HFS+D
Sbjct: 244 PIQIYEKIVSGKVRFPSHFSSD 265
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 80/202 (39%), Gaps = 20/202 (9%)
Query: 18 KSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77
K V++ + TLN E + + + L L + +V E++P + HL
Sbjct: 77 KQKVVKLKQIEHTLN--EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL- 133
Query: 78 HWETQPMKWAMRLRVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL 134
+ + Y AQ EY S +Y DL +L D+ G +++ FG
Sbjct: 134 ----RRIGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGF 188
Query: 135 MKNSRDGKSYSTNLAFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALD 190
K + G+++ L TP PE + + ++ G ++ ++ +G PP A
Sbjct: 189 AKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQ 243
Query: 191 LIRSKNFLLLMDSALEGHFSND 212
I+ ++ HFS+D
Sbjct: 244 PIQIYEKIVSGKVRFPSHFSSD 265
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 80/202 (39%), Gaps = 20/202 (9%)
Query: 18 KSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77
K V++ + TLN E + + + L L + +V E++P + HL
Sbjct: 77 KQKVVKLKQIEHTLN--EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL- 133
Query: 78 HWETQPMKWAMRLRVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL 134
+ + Y AQ EY S +Y DL +L D+ G +++ FG
Sbjct: 134 ----RRIGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGF 188
Query: 135 MKNSRDGKSYSTNLAFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALD 190
K + G+++ L TP PE + + ++ G ++ ++ +G PP A
Sbjct: 189 AKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQ 243
Query: 191 LIRSKNFLLLMDSALEGHFSND 212
I+ ++ HFS+D
Sbjct: 244 PIQIYEKIVSGKVRFPSHFSSD 265
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 80/202 (39%), Gaps = 20/202 (9%)
Query: 18 KSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77
K V++ + TLN E + + + L L + +V E++P + HL
Sbjct: 76 KQKVVKLKQIEHTLN--EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL- 132
Query: 78 HWETQPMKWAMRLRVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL 134
+ + Y AQ EY S +Y DL +L D+ G +++ FG
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 135 MKNSRDGKSYSTNLAFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALD 190
K + G+++ L TP PE + + ++ G ++ ++ +G PP A
Sbjct: 188 AKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQ 242
Query: 191 LIRSKNFLLLMDSALEGHFSND 212
I+ ++ HFS+D
Sbjct: 243 PIQIYEKIVSGKVRFPSHFSSD 264
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 80/202 (39%), Gaps = 20/202 (9%)
Query: 18 KSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77
K V++ + TLN E + + + L L + +V E++P + HL
Sbjct: 76 KQKVVKLKQIEHTLN--EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL- 132
Query: 78 HWETQPMKWAMRLRVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL 134
+ + Y AQ EY S +Y DL +L D+ G +++ FG
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 135 MKNSRDGKSYSTNLAFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALD 190
K + G+++ L TP PE + + ++ G ++ ++ +G PP A
Sbjct: 188 AKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQ 242
Query: 191 LIRSKNFLLLMDSALEGHFSND 212
I+ ++ HFS+D
Sbjct: 243 PIQIYEKIVSGKVRFPSHFSSD 264
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 80/202 (39%), Gaps = 20/202 (9%)
Query: 18 KSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77
K V++ + TLN E + + + L L + +V E++P + HL
Sbjct: 76 KQKVVKLKQIEHTLN--EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL- 132
Query: 78 HWETQPMKWAMRLRVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL 134
+ + Y AQ EY S +Y DL +L D+ G +++ FG
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 135 MKNSRDGKSYSTNLAFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALD 190
K + G+++ L TP PE + + ++ G ++ ++ +G PP A
Sbjct: 188 AKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQ 242
Query: 191 LIRSKNFLLLMDSALEGHFSND 212
I+ ++ HFS+D
Sbjct: 243 PIQIYEKIVSGKVRFPSHFSSD 264
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 80/202 (39%), Gaps = 20/202 (9%)
Query: 18 KSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77
K V++ + TLN E + + + L L + +V E++P + HL
Sbjct: 69 KQKVVKLKQIEHTLN--EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL- 125
Query: 78 HWETQPMKWAMRLRVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL 134
+ + Y AQ EY S +Y DL +L D+ G +++ FG
Sbjct: 126 ----RRIGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGF 180
Query: 135 MKNSRDGKSYSTNLAFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALD 190
K + G+++ L TP PE + + ++ G ++ ++ +G PP A
Sbjct: 181 AKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQ 235
Query: 191 LIRSKNFLLLMDSALEGHFSND 212
I+ ++ HFS+D
Sbjct: 236 PIQIYEKIVSGKVRFPSHFSSD 257
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 80/202 (39%), Gaps = 20/202 (9%)
Query: 18 KSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77
K V++ + TLN E + + + L L + +V E++P + HL
Sbjct: 76 KQKVVKLKQIEHTLN--EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL- 132
Query: 78 HWETQPMKWAMRLRVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL 134
+ + Y AQ EY S +Y DL +L D+ G +++ FG
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 135 MKNSRDGKSYSTNLAFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALD 190
K + G+++ L TP PE + + ++ G ++ ++ +G PP A
Sbjct: 188 AKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQ 242
Query: 191 LIRSKNFLLLMDSALEGHFSND 212
I+ ++ HFS+D
Sbjct: 243 PIQIYEKIVSGKVRFPSHFSSD 264
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 80/202 (39%), Gaps = 20/202 (9%)
Query: 18 KSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77
K V++ + TLN E + + + L L + +V E++P + HL
Sbjct: 76 KQKVVKLKQIEHTLN--EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL- 132
Query: 78 HWETQPMKWAMRLRVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL 134
+ + Y AQ EY S +Y DL +L D+ G +++ FG
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 135 MKNSRDGKSYSTNLAFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALD 190
K + G+++ L TP PE + + ++ G ++ ++ +G PP A
Sbjct: 188 AKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQ 242
Query: 191 LIRSKNFLLLMDSALEGHFSND 212
I+ ++ HFS+D
Sbjct: 243 PIQIYEKIVSGKVRFPSHFSSD 264
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 80/202 (39%), Gaps = 20/202 (9%)
Query: 18 KSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77
K V++ + TLN E + + + L L + +V E++P + HL
Sbjct: 76 KQKVVKLKQIEHTLN--EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL- 132
Query: 78 HWETQPMKWAMRLRVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL 134
+ + Y AQ EY S +Y DL +L D+ G +++ FG
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 135 MKNSRDGKSYSTNLAFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALD 190
K + G+++ L TP PE + + ++ G ++ ++ +G PP A
Sbjct: 188 AKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQ 242
Query: 191 LIRSKNFLLLMDSALEGHFSND 212
I+ ++ HFS+D
Sbjct: 243 PIQIYEKIVSGKVRFPSHFSSD 264
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 80/202 (39%), Gaps = 20/202 (9%)
Query: 18 KSSVLESSDLGETLNLEEAKAVGNLRSERLANLIGCCYEADERLLVAEFMPNETLAKHLF 77
K V++ + TLN E + + + L L + +V E++P + HL
Sbjct: 77 KQKVVKLKQIEHTLN--EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL- 133
Query: 78 HWETQPMKWAMRLRVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL 134
+ + Y AQ EY S +Y DL +L D+ G +++ FG
Sbjct: 134 ----RRIGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGF 188
Query: 135 MKNSRDGKSYSTNLAFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALD 190
K + G+++ L TP PE + + ++ G ++ ++ +G PP A
Sbjct: 189 AKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQ 243
Query: 191 LIRSKNFLLLMDSALEGHFSND 212
I+ ++ HFS+D
Sbjct: 244 PIQIYEKIVSGKVRFPSHFSSD 265
>pdb|1PX5|A Chain A, Crystal Structure Of The 2'-Specific And Double-Stranded
Rna-Activated Interferon-Induced Antiviral Protein
2'-5'- Oligoadenylate Synthetase
pdb|1PX5|B Chain B, Crystal Structure Of The 2'-Specific And Double-Stranded
Rna-Activated Interferon-Induced Antiviral Protein
2'-5'- Oligoadenylate Synthetase
Length = 349
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Query: 225 LQSEARERPNAKSLVISLMSLQKEAE---VPSYVLLGIQHETAPSTKP 269
+QS RE P A S V+S LQ+E E +P++ LG + P KP
Sbjct: 120 VQSPRRENPRALSFVLSSPQLQQEVEFDVLPAFDALG---QWTPGYKP 164
>pdb|3FP2|A Chain A, Crystal Structure Of Tom71 Complexed With Hsp82 C-Terminal
Fragment
pdb|3FP3|A Chain A, Crystal Structure Of Tom71
pdb|3FP4|A Chain A, Crystal Structure Of Tom71 Complexed With Ssa1 C-Terminal
Fragment
Length = 537
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Query: 322 KKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQV 381
K G+ F AK+F+ AI Y I+ P Y+ Y+ ++ + +A
Sbjct: 29 KNRGNHFFTAKNFNEAIKYYQYAIELDPN-EPVFYSNISACYISTGDLEKVIEFTTKALE 87
Query: 382 VSPDWPTALYLQAACLFSLGMENDA 406
+ PD AL +A+ SLG DA
Sbjct: 88 IKPDHSKALLRRASANESLGNFTDA 112
>pdb|3LCA|A Chain A, Structure Of Tom71 Complexed With Hsp70 Ssa1 C Terminal
Tail Indicating Conformational Plasticity
Length = 533
Score = 29.3 bits (64), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Query: 322 KKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQV 381
K G+ F AK+F+ AI Y I+ P Y+ Y+ ++ + +A
Sbjct: 25 KNRGNHFFTAKNFNEAIKYYQYAIELDPN-EPVFYSNISACYISTGDLEKVIEFTTKALE 83
Query: 382 VSPDWPTALYLQAACLFSLGMENDA 406
+ PD AL +A+ SLG DA
Sbjct: 84 IKPDHSKALLRRASANESLGNFTDA 108
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 28.9 bits (63), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 110 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPES 165
+Y DL +L D+ G +++ FG K + G +++ L TP PE + +
Sbjct: 184 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GATWT--LCGTPEYLAPEIILSKGYNKAV 240
Query: 166 VVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 212
++ G ++ ++ +G PP A I+ ++ HFS+D
Sbjct: 241 DWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSD 285
>pdb|3NRC|A Chain A, Crystal Stucture Of The Francisella Tularensis Enoyl-Acyl
Carrier Protein Reductase (Fabi) In Complex With Nad+
And Triclosan
pdb|3NRC|B Chain B, Crystal Stucture Of The Francisella Tularensis Enoyl-Acyl
Carrier Protein Reductase (Fabi) In Complex With Nad+
And Triclosan
pdb|3UIC|A Chain A, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|B Chain B, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|C Chain C, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|D Chain D, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|E Chain E, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|F Chain F, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|G Chain G, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|H Chain H, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|I Chain I, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|J Chain J, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|K Chain K, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|L Chain L, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|M Chain M, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|N Chain N, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|O Chain O, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|P Chain P, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
Length = 280
Score = 28.5 bits (62), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 53/126 (42%), Gaps = 3/126 (2%)
Query: 225 LQSEARER-PNAKSLVISLMSLQKEAEVPSYVLLGIQHETAPSTKPLSLTPLGEACSRLD 283
L E R N + +++L + E +PSY +G+ + +T + LGE +++
Sbjct: 146 LAKEGRSMMKNRNASMVALTYIGAEKAMPSYNTMGVAKASLEATVRYTALALGEDGIKVN 205
Query: 284 LTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDT-AFRAKDFSTAIDCYT 342
+ I + + L + S +++ ++ + G+T AF D +T I
Sbjct: 206 AVSAGPI-KTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAFLCSDMATGITGEV 264
Query: 343 QFIDGG 348
+D G
Sbjct: 265 VHVDAG 270
>pdb|2JJY|A Chain A, Crystal Structure Of Francisella Tularensis Enoyl
Reductase (Ftfabi) With Bound Nad
pdb|2JJY|B Chain B, Crystal Structure Of Francisella Tularensis Enoyl
Reductase (Ftfabi) With Bound Nad
pdb|2JJY|C Chain C, Crystal Structure Of Francisella Tularensis Enoyl
Reductase (Ftfabi) With Bound Nad
pdb|2JJY|D Chain D, Crystal Structure Of Francisella Tularensis Enoyl
Reductase (Ftfabi) With Bound Nad
Length = 268
Score = 28.5 bits (62), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 53/126 (42%), Gaps = 3/126 (2%)
Query: 225 LQSEARER-PNAKSLVISLMSLQKEAEVPSYVLLGIQHETAPSTKPLSLTPLGEACSRLD 283
L E R N + +++L + E +PSY +G+ + +T + LGE +++
Sbjct: 126 LAKEGRSMMKNRNASMVALTYIGAEKAMPSYNTMGVAKASLEATVRYTALALGEDGIKVN 185
Query: 284 LTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDT-AFRAKDFSTAIDCYT 342
+ I + + L + S +++ ++ + G+T AF D +T I
Sbjct: 186 AVSAGPI-KTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAFLCSDMATGITGEV 244
Query: 343 QFIDGG 348
+D G
Sbjct: 245 VHVDAG 250
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.132 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,234,770
Number of Sequences: 62578
Number of extensions: 487126
Number of successful extensions: 1526
Number of sequences better than 100.0: 414
Number of HSP's better than 100.0 without gapping: 117
Number of HSP's successfully gapped in prelim test: 297
Number of HSP's that attempted gapping in prelim test: 1298
Number of HSP's gapped (non-prelim): 416
length of query: 423
length of database: 14,973,337
effective HSP length: 101
effective length of query: 322
effective length of database: 8,652,959
effective search space: 2786252798
effective search space used: 2786252798
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)