Your job contains 1 sequence.
>014485
MNHCVPDFEFDDDHSIPTSSVLNRPRKSAMAEEDVMELLWQNGPVVLHNQNQRSLKKSQP
SFPADQSAPREIPSSHHHQQEQQDHLFMQEDEMASWLHYPLNDTNFDSDFCTDLLYPAPC
ITSTTTTTATATATPPVRATRVRDSRPQLNTATTVASAPPLRPPIPPPPRRTENFGLFAR
HMPREVASGPSNSKSVTIRESTVVDSSDTPAPGPDSRASEAMRSMEGASGVNNNNRCRNT
SGAGAAATSSGGGGGSSGARDLTMCEMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRETD
DEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCN
KSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQYMPNMGMGIGMGMGMGRAW
IWE
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 014485
(423 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2061634 - symbol:PIL5 "phytochrome interacting... 429 2.9e-64 2
TAIR|locus:4010713915 - symbol:AT4G28811 species:3702 "Ar... 327 9.4e-45 3
TAIR|locus:2012345 - symbol:PIF3 "AT1G09530" species:3702... 356 2.1e-40 2
TAIR|locus:2053733 - symbol:PIF4 "AT2G43010" species:3702... 331 8.3e-39 2
TAIR|locus:2077680 - symbol:PIL6 "AT3G59060" species:3702... 328 1.7e-38 2
UNIPROTKB|Q8GRJ1 - symbol:OJ1343_B12.103 "Transcription f... 346 2.4e-37 2
UNIPROTKB|Q5NAE0 - symbol:P0498A12.33 "Putative BP-5 prot... 340 9.4e-36 3
TAIR|locus:2117788 - symbol:AT4G28800 species:3702 "Arabi... 280 1.7e-35 2
TAIR|locus:2117773 - symbol:AT4G28790 species:3702 "Arabi... 298 2.4e-35 2
TAIR|locus:4010713916 - symbol:AT4G28815 species:3702 "Ar... 259 1.2e-32 3
TAIR|locus:2041369 - symbol:PIL1 "phytochrome interacting... 277 2.0e-27 2
TAIR|locus:2126876 - symbol:UNE10 "AT4G00050" species:370... 250 2.7e-27 2
UNIPROTKB|Q7FA23 - symbol:OSJNBa0058K23.6 "Os04g0618600 p... 300 1.2e-26 1
TAIR|locus:2115080 - symbol:SPT "AT4G36930" species:3702 ... 292 8.4e-26 1
UNIPROTKB|Q5VRS4 - symbol:OSJNBa0015I14.14 "Basic helix-l... 281 1.2e-24 1
UNIPROTKB|Q948F6 - symbol:OSJNBa0049O12.18 "Putative SPAT... 278 2.6e-24 1
TAIR|locus:2155503 - symbol:ALC "AT5G67110" species:3702 ... 240 2.7e-20 1
TAIR|locus:2163163 - symbol:PIF7 "AT5G61270" species:3702... 227 3.3e-19 2
TAIR|locus:2098008 - symbol:PIL2 "phytochrome interacting... 212 9.8e-17 2
TAIR|locus:2126624 - symbol:LRL2 "AT4G30980" species:3702... 209 2.0e-15 1
TAIR|locus:2047555 - symbol:LRL1 "AT2G24260" species:3702... 212 2.2e-15 1
UNIPROTKB|Q69Y51 - symbol:P0698A06.26-2 "Putative bHLH tr... 210 7.0e-15 1
TAIR|locus:2147760 - symbol:LRL3 "AT5G58010" species:3702... 202 1.2e-14 1
UNIPROTKB|Q7Y1H4 - symbol:OSJNBa0094F01.11 "Putative unch... 197 5.1e-14 1
UNIPROTKB|Q94LR3 - symbol:OSJNBa0010C11.7 "Helix-loop-hel... 183 7.6e-14 1
TAIR|locus:2201906 - symbol:AT1G10120 "AT1G10120" species... 197 1.9e-13 1
UNIPROTKB|Q2QMM0 - symbol:LOC_Os12g40710 "Helix-loop-heli... 188 2.3e-13 1
UNIPROTKB|Q84T08 - symbol:OSJNBa0087C10.10 "BHLH transcri... 182 2.3e-13 2
TAIR|locus:2132303 - symbol:UNE12 "AT4G02590" species:370... 193 2.7e-13 1
TAIR|locus:505006688 - symbol:AT5G50915 "AT5G50915" speci... 190 3.5e-13 1
TAIR|locus:2202867 - symbol:BPEp "AT1G59640" species:3702... 194 3.5e-13 1
TAIR|locus:2205420 - symbol:AT1G68920 species:3702 "Arabi... 184 5.8e-13 2
TAIR|locus:2204898 - symbol:HFR1 "AT1G02340" species:3702... 179 8.9e-13 2
TAIR|locus:2007534 - symbol:AT1G03040 "AT1G03040" species... 187 1.3e-12 1
UNIPROTKB|Q8GZV6 - symbol:OJ1017C11.10 "Putative uncharac... 196 1.3e-12 1
TAIR|locus:2115200 - symbol:BEE2 "AT4G36540" species:3702... 182 1.4e-12 2
UNIPROTKB|Q75M33 - symbol:P0668H12.5 "BHLH transcription ... 187 2.3e-12 1
TAIR|locus:2028804 - symbol:CIB5 "AT1G26260" species:3702... 188 2.8e-12 1
UNIPROTKB|Q6Z2G7 - symbol:P0680A05.9 "Putative bHLH trans... 186 3.8e-12 1
UNIPROTKB|Q69WS3 - symbol:OJ1118_E12.15 "Putative bHLH pr... 180 4.0e-12 1
UNIPROTKB|Q6Z7E7 - symbol:P0020C11.18 "Putative bHLH tran... 189 4.3e-12 1
TAIR|locus:2032990 - symbol:CES "AT1G25330" species:3702 ... 167 4.8e-12 1
TAIR|locus:2139484 - symbol:CIB1 "AT4G34530" species:3702... 183 6.6e-12 1
TAIR|locus:2172209 - symbol:AT5G62610 "AT5G62610" species... 177 1.5e-11 1
UNIPROTKB|Q2QMN2 - symbol:LOC_Os12g40590 "Helix-loop-heli... 168 1.5e-11 2
UNIPROTKB|Q84LH4 - symbol:OSJNBb0011H13.2 "Putative Helix... 179 1.8e-11 1
TAIR|locus:2152551 - symbol:AT5G48560 "AT5G48560" species... 182 2.5e-11 1
UNIPROTKB|Q6ZCV8 - symbol:P0028A08.20 "Os08g0487700 prote... 179 2.6e-11 1
TAIR|locus:2014144 - symbol:BEE1 "BR enhanced expression ... 172 3.4e-11 1
UNIPROTKB|Q69JJ6 - symbol:OSJNBa0026C08.22 "TA1 protein-l... 180 3.8e-11 2
UNIPROTKB|Q2QMV9 - symbol:LOC_Os12g39850 "Helix-loop-heli... 174 5.4e-11 1
UNIPROTKB|Q6EPZ6 - symbol:P0014G10.34 "BHLH transcription... 179 5.5e-11 1
UNIPROTKB|Q84QW1 - symbol:OJ1191_A10.109 "BHLH transcript... 177 6.0e-11 1
TAIR|locus:2199307 - symbol:AT1G68240 species:3702 "Arabi... 155 1.0e-10 1
TAIR|locus:2095198 - symbol:AT3G23690 "AT3G23690" species... 174 1.1e-10 1
TAIR|locus:2079676 - symbol:AT3G07340 "AT3G07340" species... 175 1.3e-10 1
UNIPROTKB|Q5VR96 - symbol:P0038C05.31-1 "Os06g0275600 pro... 172 2.7e-10 1
TAIR|locus:2053766 - symbol:AT2G42300 "AT2G42300" species... 169 2.8e-10 1
TAIR|locus:2118934 - symbol:RSL2 "AT4G33880" species:3702... 169 3.5e-10 1
UNIPROTKB|Q5N802 - symbol:P0004D12.24 "BHLH transcription... 169 7.1e-10 1
UNIPROTKB|Q2QQ32 - symbol:LOC_Os12g32400 "Helix-loop-heli... 146 1.0e-09 1
UNIPROTKB|Q6K8Y4 - symbol:OJ1695_H09.18 "Basic helix-loop... 167 1.5e-09 2
TAIR|locus:2199221 - symbol:RSL4 "AT1G27740" species:3702... 159 1.6e-09 1
TAIR|locus:2027809 - symbol:BEE3 "AT1G73830" species:3702... 159 1.7e-09 1
UNIPROTKB|Q2QML8 - symbol:LOC_Os12g40730 "Helix-loop-heli... 157 1.7e-09 2
TAIR|locus:504954900 - symbol:AT5G43175 "AT5G43175" speci... 153 2.6e-09 1
UNIPROTKB|Q2R0R9 - symbol:LOC_Os11g41640 "Helix-loop-heli... 156 2.7e-09 1
TAIR|locus:2144791 - symbol:HEC3 "AT5G09750" species:3702... 150 7.3e-09 1
UNIPROTKB|Q8W5G3 - symbol:OSJNBa0002J24.23 "Helix-loop-he... 155 1.0e-08 1
UNIPROTKB|Q8S490 - symbol:rau1 "Transcription factor RAU1... 136 1.3e-08 1
UNIPROTKB|Q6AV35 - symbol:OSJNBa0063J18.7 "Putative trans... 153 1.7e-08 1
TAIR|locus:2008693 - symbol:FBH1 "AT1G35460" species:3702... 144 1.1e-07 1
UNIPROTKB|Q2QMM8 - symbol:LOC_Os12g40630 "Helix-loop-heli... 143 1.2e-07 1
UNIPROTKB|Q6ZFY4 - symbol:OJ1311_H06.19 "BHLH protein-lik... 144 1.7e-07 1
TAIR|locus:2141573 - symbol:FBH2 "AT4G09180" species:3702... 141 2.5e-07 1
TAIR|locus:2046198 - symbol:FRU "AT2G28160" species:3702 ... 143 2.7e-07 1
TAIR|locus:2126856 - symbol:IND "AT4G00120" species:3702 ... 134 3.4e-07 1
UNIPROTKB|E9PKF0 - symbol:ARNTL "Aryl hydrocarbon recepto... 123 3.4e-07 1
UNIPROTKB|Q8S0N2 - symbol:P0692C11.41-1 "BHLH transcripti... 142 5.6e-07 1
UNIPROTKB|Q67TR8 - symbol:B1342C04.6 "Basic helix-loop-he... 131 6.4e-07 2
TAIR|locus:2076581 - symbol:AT3G57800 "AT3G57800" species... 120 6.6e-07 2
UNIPROTKB|Q8QGQ7 - symbol:ARNTL2 "Aryl hydrocarbon recept... 143 9.3e-07 1
UNIPROTKB|F1NQL8 - symbol:ARNTL2 "Aryl hydrocarbon recept... 143 9.3e-07 1
UNIPROTKB|E1C1C5 - symbol:ARNTL2 "Aryl hydrocarbon recept... 143 9.4e-07 1
UNIPROTKB|Q69TX2 - symbol:P0021C04.13 "BHLH protein-like"... 132 1.1e-06 1
UNIPROTKB|Q6Z9R3 - symbol:P0461F06.33 "BHLH protein famil... 134 1.4e-06 1
TAIR|locus:2074865 - symbol:HEC2 "AT3G50330" species:3702... 133 1.4e-06 1
UNIPROTKB|Q7XT55 - symbol:OSJNBa0084K20.3 "OSJNBa0076N16.... 132 1.4e-06 1
UNIPROTKB|Q651K2 - symbol:B1089G05.30 "BHLH protein-like"... 136 1.4e-06 1
TAIR|locus:2045263 - symbol:AT2G31730 species:3702 "Arabi... 117 1.5e-06 1
TAIR|locus:2155543 - symbol:HEC1 "HECATE 1" species:3702 ... 133 1.6e-06 1
TAIR|locus:2059979 - symbol:FBH4 "AT2G42280" species:3702... 137 1.7e-06 1
UNIPROTKB|Q657A4 - symbol:P0022F12.30 "Regulatory protein... 137 1.8e-06 1
TAIR|locus:2205455 - symbol:BIM2 "AT1G69010" species:3702... 135 2.1e-06 1
TAIR|locus:2156015 - symbol:RSL1 "AT5G37800" species:3702... 134 2.7e-06 1
TAIR|locus:2062235 - symbol:NAI1 "AT2G22770" species:3702... 134 2.9e-06 1
UNIPROTKB|Q75GI1 - symbol:OSJNBa0013A09.16 "Putative tran... 136 3.1e-06 2
TAIR|locus:2028957 - symbol:RHD6 "AT1G66470" species:3702... 133 3.2e-06 1
RGD|3092 - symbol:Mitf "microphthalmia-associated transcr... 113 4.2e-06 1
UNIPROTKB|O88368 - symbol:Mitf "Microphthalmia-associated... 113 4.2e-06 1
WARNING: Descriptions of 126 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2061634 [details] [associations]
symbol:PIL5 "phytochrome interacting factor 3-like 5"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0015995 "chlorophyll
biosynthetic process" evidence=IMP] [GO:0010187 "negative
regulation of seed germination" evidence=IGI;IMP] [GO:0010313
"phytochrome binding" evidence=IDA] [GO:0009959 "negative
gravitropism" evidence=IMP;TAS] [GO:0010029 "regulation of seed
germination" evidence=TAS] [GO:0010099 "regulation of
photomorphogenesis" evidence=TAS] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=IMP] [GO:0010161 "red
light signaling pathway" evidence=IDA] [GO:0006783 "heme
biosynthetic process" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0009686 "gibberellin biosynthetic
process" evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0048608 "reproductive structure development" evidence=RCA]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010187 GO:GO:0006783 Gene3D:4.10.280.10
SUPFAM:SSF47459 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30
GO:GO:0010161 EMBL:AC006081 HSSP:P61244 HOGENOM:HOG000240264
GO:GO:0015995 GO:GO:0010100 GO:GO:0009740 GO:GO:0009959
EMBL:AF488560 EMBL:AB103113 EMBL:AK228820 EMBL:BT029775
IPI:IPI00527244 IPI:IPI00537020 PIR:A84586 RefSeq:NP_001189559.1
RefSeq:NP_179608.2 RefSeq:NP_849996.1 UniGene:At.43003
UniGene:At.69322 ProteinModelPortal:Q8GZM7 SMR:Q8GZM7 IntAct:Q8GZM7
STRING:Q8GZM7 PRIDE:Q8GZM7 EnsemblPlants:AT2G20180.2
EnsemblPlants:AT2G20180.3 GeneID:816538 KEGG:ath:AT2G20180
TAIR:At2g20180 eggNOG:NOG264707 InParanoid:Q8GZM7 OMA:QEDEMTS
PhylomeDB:Q8GZM7 ProtClustDB:CLSN2690808 Genevestigator:Q8GZM7
GO:GO:0010313 Uniprot:Q8GZM7
Length = 478
Score = 429 (156.1 bits), Expect = 2.9e-64, Sum P(2) = 2.9e-64
Identities = 85/144 (59%), Positives = 106/144 (73%)
Query: 262 LTMCEMTVTXXXXXXXXXXXXXXQKPAAEDRKRKGRETDDEYHSEDVELESADAKKQSRG 321
+T + +T +K +DRKRK RE +++ E S + K+
Sbjct: 220 MTAPAIEITGTSSSVVSKSEIEPEKTNVDDRKRKEREATT---TDETESRSEETKQARVS 276
Query: 322 STSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQ 381
+TS KRSRAAEVHNLSER+RRDRINE+M+ALQELIPRCNKSDKASMLDEAIEY+KSLQLQ
Sbjct: 277 TTSTKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQ 336
Query: 382 VQMMSMGCGVVPMMFPGVQQYMPN 405
+QMMSMGCG++PMM+PG+QQYMP+
Sbjct: 337 IQMMSMGCGMMPMMYPGMQQYMPH 360
Score = 244 (91.0 bits), Expect = 2.9e-64, Sum P(2) = 2.9e-64
Identities = 64/129 (49%), Positives = 78/129 (60%)
Query: 1 MNHCVPDFEFDDDHSIPTSSVLNR-PRKS--AMAEED-VMELLWQNGPVVLHNQNQRSLK 56
M+H VPDF+ DDD+ +S LN PRKS M E+D +MELLWQNG VV+ QNQR L
Sbjct: 1 MHHFVPDFDTDDDYVNNHNSSLNHLPRKSITTMGEDDDLMELLWQNGQVVV--QNQR-LH 57
Query: 57 KSQPSFPADQSAPREIPSSXXXXX-XXXXXLFMQEDEMASWLHYPLNDTNFDSDFCTDLL 115
+PS S P+ +PS LF+QEDEM SWLHYPL D DFC+DLL
Sbjct: 58 TKKPS----SSPPKLLPSMDPQQQPSSDQNLFIQEDEMTSWLHYPLRD----DDFCSDLL 109
Query: 116 YPA-PCITS 123
+ A P T+
Sbjct: 110 FSAAPTATA 118
Score = 72 (30.4 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 42/160 (26%), Positives = 59/160 (36%)
Query: 188 SGPSNSKSVTIRESTVVDSSDTPAPGPDSRASEAMRSMEGASGVNNNNRCRNXXXXXXXX 247
SGP SK+V +REST V S TP+ + ASE SG+ R
Sbjct: 163 SGPLLSKAV-VRESTQVSPSATPS----AAASE--------SGLTR----RTDGTDSSAV 205
Query: 248 XXXXXXXXXXXXRDLTMCEMTVTXXXXXXXXXXXXXXQKPAAEDRKRKGRE--TDDEYHS 305
+T + +T +K +DRKRK RE T DE S
Sbjct: 206 AGGGAYNRKGKAVAMTAPAIEITGTSSSVVSKSEIEPEKTNVDDRKRKEREATTTDETES 265
Query: 306 EDVELESA----DAKKQSRGSTSAKRSRAAEVHNLSERRR 341
E + A + K+SR + S ++ER +
Sbjct: 266 RSEETKQARVSTTSTKRSRAAEVHNLSERKRRDRINERMK 305
>TAIR|locus:4010713915 [details] [associations]
symbol:AT4G28811 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
HOGENOM:HOG000240264 EMBL:AJ519811 IPI:IPI00518617 PIR:H85335
PIR:T04518 RefSeq:NP_001078462.1 UniGene:At.46149
ProteinModelPortal:Q8GT73 SMR:Q8GT73 PRIDE:Q8GT73
EnsemblPlants:AT4G28811.1 GeneID:5008170 KEGG:ath:AT4G28811
TAIR:At4g28811 eggNOG:NOG314238 PhylomeDB:Q8GT73
ProtClustDB:CLSN2699107 Genevestigator:Q8GT73 Uniprot:Q8GT73
Length = 544
Score = 327 (120.2 bits), Expect = 9.4e-45, Sum P(3) = 9.4e-45
Identities = 66/116 (56%), Positives = 92/116 (79%)
Query: 293 KRKGRETDDEYHSEDV-ELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRA 351
+R+ + T+D+ E + E++ + ++ GSTS KRSRAA++HNLSERRRR+RINE+M+
Sbjct: 323 ERETKITEDKKREETIAEIQGTE---EAHGSTSRKRSRAADMHNLSERRRRERINERMKT 379
Query: 352 LQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVP-MMFPG-VQQYMPN 405
LQEL+PRC K+DK SML++ IEY+KSLQLQ+QMMSMG G++P MM G QQ+MP+
Sbjct: 380 LQELLPRCRKTDKVSMLEDVIEYVKSLQLQIQMMSMGHGMMPPMMHEGNTQQFMPH 435
Score = 135 (52.6 bits), Expect = 9.4e-45, Sum P(3) = 9.4e-45
Identities = 38/94 (40%), Positives = 48/94 (51%)
Query: 17 PTSSV-LNRPRKSAMAEEDVMELLWQNGPVVLHNQNQRSLKKSQPSFPADQSAP-REIPS 74
P SSV L P A +E+DV+ELLW++G VV Q QR + P F S E
Sbjct: 92 PQSSVSLPPPPPIAPSEDDVVELLWKSGQVVQSIQTQRPIPP--PIFRGSGSGGGEETVL 149
Query: 75 SXXXXXXXXXXLFMQEDEMASWLHYPLNDTNFDS 108
+F+QEDEMASWL++PL F S
Sbjct: 150 PLPPLHPSHQNIFIQEDEMASWLYHPLRQDYFSS 183
Score = 116 (45.9 bits), Expect = 8.9e-43, Sum P(3) = 8.9e-43
Identities = 31/80 (38%), Positives = 44/80 (55%)
Query: 30 MAEEDVMELLWQNGPVVLHNQNQR-SLKKSQPSFP---------ADQSAPREIPSSXXXX 79
M E+D++ELLW NG VV +Q QR S K P+ P +++AP +P
Sbjct: 1 MGEDDIVELLW-NGQVVRTSQPQRPSSGKPSPTPPILRGSGSGSGEENAPLPLPLLQPPR 59
Query: 80 XXXXXXLFMQEDEMASWLHY 99
LF++E+EM+SWLHY
Sbjct: 60 PLHHQNLFIREEEMSSWLHY 79
Score = 50 (22.7 bits), Expect = 9.4e-45, Sum P(3) = 9.4e-45
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 172 TENFGLFARHMPREVASGPSNSKSVTIRESTVVDSSDTPA 211
TENF F R + + SG + EST + SS TP+
Sbjct: 219 TENFMNFLR-LRGNIFSGGRVEAGPVVIESTQIGSSATPS 257
>TAIR|locus:2012345 [details] [associations]
symbol:PIF3 "AT1G09530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009639 "response to red or far red
light" evidence=IMP] [GO:0010017 "red or far-red light signaling
pathway" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0031539
"positive regulation of anthocyanin metabolic process"
evidence=IMP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=IMP] [GO:0009704 "de-etiolation" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0007165 "signal transduction"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC003970
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0010017
GO:GO:0009704 GO:GO:0009740 GO:GO:0031539 EMBL:AF100166
EMBL:AF251693 EMBL:AF088280 EMBL:AK117255 EMBL:EF193482
EMBL:EF193483 EMBL:EF193484 EMBL:EF193485 EMBL:EF193486
EMBL:EF193487 EMBL:EF193488 EMBL:EF193489 EMBL:EF193490
EMBL:EF193491 EMBL:EF193492 EMBL:EF193493 EMBL:EF193494
EMBL:EF193495 EMBL:EF193496 IPI:IPI00530297 PIR:H86228
RefSeq:NP_172424.1 RefSeq:NP_849626.1 UniGene:At.10926
ProteinModelPortal:O80536 SMR:O80536 DIP:DIP-33892N IntAct:O80536
STRING:O80536 EnsemblPlants:AT1G09530.1 EnsemblPlants:AT1G09530.2
GeneID:837479 KEGG:ath:AT1G09530 TAIR:At1g09530 eggNOG:NOG285764
InParanoid:O80536 KO:K12126 OMA:WENGQIS PhylomeDB:O80536
ProtClustDB:CLSN2679266 Genevestigator:O80536 GermOnline:AT1G09530
Uniprot:O80536
Length = 524
Score = 356 (130.4 bits), Expect = 2.1e-40, Sum P(2) = 2.1e-40
Identities = 79/125 (63%), Positives = 93/125 (74%)
Query: 285 QKPAAEDRKRKGRETDDEYHSEDVELESADAKKQ---SRGSTSAKRSRAAEVHNLSERRR 341
+ P+ +++ D + HSEDVE ES D +K+ SR +KRSR+AEVHNLSERRR
Sbjct: 296 ESPSLSLKRKHSNIQDIDCHSEDVEEESGDGRKEAGPSRTGLGSKRSRSAEVHNLSERRR 355
Query: 342 RDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGV-VP--MMFP- 397
RDRINEKMRALQELIP CNK DKASMLDEAIEYLKSLQLQVQ+MSM G +P +MFP
Sbjct: 356 RDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMSMASGYYLPPAVMFPP 415
Query: 398 GVQQY 402
G+ Y
Sbjct: 416 GMGHY 420
Score = 92 (37.4 bits), Expect = 2.1e-40, Sum P(2) = 2.1e-40
Identities = 27/94 (28%), Positives = 46/94 (48%)
Query: 33 EDVMELLWQNGPVVLHNQNQRSLKKSQPSFPADQSAPREIPSSXXXXXXXXXXLFM---- 88
++V+EL+W+NG + +Q+ RS ++ P A+ S REI + + +
Sbjct: 27 DEVVELVWENGQISTQSQSSRS--RNIPPPQANSSRAREIGNGSKTTMVDEIPMSVPSLM 84
Query: 89 ----QEDEMASWL-HYPLNDTNFDSDFCTDLLYP 117
Q+D+ WL H+P D + SDF D+ P
Sbjct: 85 TGLSQDDDFVPWLNHHPSLD-GYCSDFLRDVSSP 117
>TAIR|locus:2053733 [details] [associations]
symbol:PIF4 "AT2G43010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA;IMP] [GO:0010161 "red light
signaling pathway" evidence=IGI] [GO:0009704 "de-etiolation"
evidence=IMP] [GO:0010600 "regulation of auxin biosynthetic
process" evidence=IDA] [GO:0010928 "regulation of auxin mediated
signaling pathway" evidence=IDA] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0009862 "systemic
acquired resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0009585 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0010161 GO:GO:0009704 GO:GO:0010928
EMBL:AC006224 EMBL:AJ440755 EMBL:AF251694 EMBL:AY142625
EMBL:AF360221 EMBL:EF193514 EMBL:EF193515 EMBL:EF193516
EMBL:EF193517 EMBL:EF193518 EMBL:EF193519 EMBL:EF193520
EMBL:EF193521 EMBL:EF193522 EMBL:EF193523 EMBL:EF193524
EMBL:EF193525 EMBL:EF193526 EMBL:EF193527 IPI:IPI00520232
IPI:IPI00534557 PIR:H84860 RefSeq:NP_565991.2 UniGene:At.19015
ProteinModelPortal:Q8W2F3 SMR:Q8W2F3 IntAct:Q8W2F3 STRING:Q8W2F3
EnsemblPlants:AT2G43010.1 GeneID:818903 KEGG:ath:AT2G43010
TAIR:At2g43010 eggNOG:NOG244119 InParanoid:Q8W2F3 KO:K16189
OMA:IRETEME PhylomeDB:Q8W2F3 ProtClustDB:CLSN2680212
Genevestigator:Q8W2F3 GermOnline:AT2G43010 GO:GO:0010600
Uniprot:Q8W2F3
Length = 430
Score = 331 (121.6 bits), Expect = 8.3e-39, Sum P(2) = 8.3e-39
Identities = 74/116 (63%), Positives = 86/116 (74%)
Query: 291 DRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMR 350
DRKRK DE V L A K ++ S S +RSRAAEVHNLSERRRRDRINE+M+
Sbjct: 223 DRKRKRINHTDE----SVSLSDAIGNKSNQRSGSNRRSRAAEVHNLSERRRRDRINERMK 278
Query: 351 ALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVV------PMMFPGVQ 400
ALQELIP C+K+DKAS+LDEAI+YLKSLQLQ+Q+M MG G+ PMMFPGVQ
Sbjct: 279 ALQELIPHCSKTDKASILDEAIDYLKSLQLQLQVMWMGSGMAAAAASAPMMFPGVQ 334
Score = 100 (40.3 bits), Expect = 8.3e-39, Sum P(2) = 8.3e-39
Identities = 26/102 (25%), Positives = 55/102 (53%)
Query: 8 FEFDDDHSIPTSSVLNRPRKSAMAEEDVMELLWQNGPVVLHNQNQRSLKKSQPSFPADQS 67
+ F++++S+ T+ R+S +++++ELLW++G VVL +Q R ++Q +++
Sbjct: 6 WSFEENYSLSTN------RRSIRPQDELVELLWRDGQVVLQSQTHREQTQTQKQDHHEEA 59
Query: 68 APREIPSSXXXXXXXXXXLFMQEDEMASWLHYPLNDTNFDSD 109
+ SS F+++ E SW+ YP ++ F+ D
Sbjct: 60 ----LRSST----------FLEDQETVSWIQYPPDEDPFEPD 87
>TAIR|locus:2077680 [details] [associations]
symbol:PIL6 "AT3G59060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009585 "red,
far-red light phototransduction" evidence=IMP] [GO:0009693
"ethylene biosynthetic process" evidence=IMP] [GO:0010600
"regulation of auxin biosynthetic process" evidence=IDA]
[GO:0010928 "regulation of auxin mediated signaling pathway"
evidence=IDA] [GO:0000096 "sulfur amino acid metabolic process"
evidence=RCA] [GO:0006546 "glycine catabolic process" evidence=RCA]
[GO:0006636 "unsaturated fatty acid biosynthetic process"
evidence=RCA] [GO:0006733 "oxidoreduction coenzyme metabolic
process" evidence=RCA] [GO:0006766 "vitamin metabolic process"
evidence=RCA] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=RCA] [GO:0009072 "aromatic amino acid family metabolic
process" evidence=RCA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=RCA] [GO:0009106 "lipoate metabolic
process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic process"
evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009684
"indoleacetic acid biosynthetic process" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA] [GO:0009965
"leaf morphogenesis" evidence=RCA] [GO:0010017 "red or far-red
light signaling pathway" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] [GO:0019748 "secondary metabolic process"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009693 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL163527 GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240264 HSSP:P22415 GO:GO:0010928
ProtClustDB:CLSN2680212 GO:GO:0010600 EMBL:AF488598 EMBL:AB103112
EMBL:AY081271 EMBL:BT000049 IPI:IPI00541791 IPI:IPI00543835
IPI:IPI00890365 PIR:T47788 RefSeq:NP_001030889.1
RefSeq:NP_001030890.1 RefSeq:NP_191465.3 RefSeq:NP_851021.1
UniGene:At.43437 UniGene:At.67329 ProteinModelPortal:Q84LH8
SMR:Q84LH8 IntAct:Q84LH8 STRING:Q84LH8 EnsemblPlants:AT3G59060.2
EnsemblPlants:AT3G59060.3 EnsemblPlants:AT3G59060.4 GeneID:825075
KEGG:ath:AT3G59060 TAIR:At3g59060 eggNOG:NOG259206
InParanoid:Q84LH8 OMA:SHCGSNQ PhylomeDB:Q84LH8
Genevestigator:Q84LH8 Uniprot:Q84LH8
Length = 444
Score = 328 (120.5 bits), Expect = 1.7e-38, Sum P(2) = 1.7e-38
Identities = 75/124 (60%), Positives = 91/124 (73%)
Query: 291 DRKRKG-RETDDEYHSE-DVELESAD----AKKQSRGSTSAKRSRAAEVHNLSERRRRDR 344
DRKRK + D E S+ D+ L S D K S+ S S +RSRAAEVHNLSERRRRDR
Sbjct: 212 DRKRKHVMDADQESVSQSDIGLTSTDDQTMGNKSSQRSGSTRRSRAAEVHNLSERRRRDR 271
Query: 345 INEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVV--------PMMF 396
INE+M+ALQELIP C+++DKAS+LDEAI+YLKSLQ+Q+Q+M MG G+ PMMF
Sbjct: 272 INERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQLQVMWMGSGMAAAAAAAASPMMF 331
Query: 397 PGVQ 400
PGVQ
Sbjct: 332 PGVQ 335
Score = 100 (40.3 bits), Expect = 1.7e-38, Sum P(2) = 1.7e-38
Identities = 28/113 (24%), Positives = 51/113 (45%)
Query: 1 MNHCVPDFEFDDDHSIPTSSVLNRPRKSAMAEEDVMELLWQNGPVVLHNQNQRSLKKSQP 60
M D+ F+D+ + T+ ++S E++++ELLW++G VVL +Q +R
Sbjct: 1 MEQVFADWNFEDNFHMSTN------KRSIRPEDELVELLWRDGQVVLQSQARREPSVQVQ 54
Query: 61 SFPADQ-SAPREIPSSXXXXXXXXXXLFMQEDEMASWLHYPLNDT--NFDSDF 110
+ + P I + + E SW+ YP +D F+S+F
Sbjct: 55 THKQETLRKPNNIFLDNQETVQKPNYAALDDQETVSWIQYPPDDVIDPFESEF 107
>UNIPROTKB|Q8GRJ1 [details] [associations]
symbol:OJ1343_B12.103 "Transcription factor BHLH9-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 EMBL:AP003824 EMBL:AP004010
Uniprot:Q8GRJ1
Length = 417
Score = 346 (126.9 bits), Expect = 2.4e-37, Sum P(2) = 2.4e-37
Identities = 67/94 (71%), Positives = 79/94 (84%)
Query: 311 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDE 370
E AD + S+ + +R+RAAEVHNLSERRRRDRINEK+RALQEL+P CNK+DKAS+LDE
Sbjct: 210 EVADETRPSKRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDE 269
Query: 371 AIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQYMP 404
AIEYLKSLQ+QVQ+M M G+VPMMFPG Q MP
Sbjct: 270 AIEYLKSLQMQVQIMWMTTGIVPMMFPGTHQLMP 303
Score = 71 (30.1 bits), Expect = 2.4e-37, Sum P(2) = 2.4e-37
Identities = 13/35 (37%), Positives = 24/35 (68%)
Query: 18 TSSVLNRPRKSAMAEEDVMELLWQNGPVVLHNQNQ 52
+SS + +K +++ +++ELLWQ+G VV H Q +
Sbjct: 11 SSSAMMMNQKKPLSDGELVELLWQDGGVVAHAQTR 45
>UNIPROTKB|Q5NAE0 [details] [associations]
symbol:P0498A12.33 "Putative BP-5 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003020
ProteinModelPortal:Q5NAE0 Gramene:Q5NAE0 Uniprot:Q5NAE0
Length = 565
Score = 340 (124.7 bits), Expect = 9.4e-36, Sum P(3) = 9.4e-36
Identities = 72/114 (63%), Positives = 85/114 (74%)
Query: 292 RKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRA 351
+KRK + + S+D +L+ + G+ S KRSR AEVHNLSERRRRDRINEKMRA
Sbjct: 275 QKRKCQAQAECSASQDDDLDDEPGVLRKSGTRSTKRSRTAEVHNLSERRRRDRINEKMRA 334
Query: 352 LQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCG--VVPMMFPGVQQYM 403
LQELIP CNK DKASMLDEAIEYLK+LQLQVQMMSMG G + PM+ P Q++
Sbjct: 335 LQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMSMGTGLCIPPMLLPTAMQHL 388
Score = 48 (22.0 bits), Expect = 9.4e-36, Sum P(3) = 9.4e-36
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 90 EDEMASWLHYPLND 103
+D+ W+HYP+ D
Sbjct: 21 DDDTVPWIHYPIID 34
Score = 38 (18.4 bits), Expect = 9.4e-36, Sum P(3) = 9.4e-36
Identities = 23/61 (37%), Positives = 28/61 (45%)
Query: 174 NFGLFARH--MPR---EVAS---GPSNSKS-VTIR---ESTVVDSSDTPAPGP---DSRA 218
NF LF+R + R E A G N S VT ESTVV ++ P P D RA
Sbjct: 142 NFSLFSRPAVLARATLESAQRTQGTDNKASNVTASNRVESTVVQTASGPRSAPAFADQRA 201
Query: 219 S 219
+
Sbjct: 202 A 202
>TAIR|locus:2117788 [details] [associations]
symbol:AT4G28800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 IPI:IPI00517558
IPI:IPI01020410 PIR:T04519 RefSeq:NP_194609.5 UniGene:At.71648
ProteinModelPortal:Q9SVU7 SMR:Q9SVU7 GeneID:829001
KEGG:ath:AT4G28800 TAIR:At4g28800 InParanoid:Q9SVU7
Genevestigator:Q9SVU7 Uniprot:Q9SVU7
Length = 445
Score = 280 (103.6 bits), Expect = 1.7e-35, Sum P(2) = 1.7e-35
Identities = 60/97 (61%), Positives = 74/97 (76%)
Query: 311 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDE 370
E +++RGSTS KRSR AE+HNL+ERRRR++INEKM+ LQ+LIPRCNKS K S LD+
Sbjct: 237 EETHGTEEARGSTSRKRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKSTKVSTLDD 296
Query: 371 AIEYLKSLQLQVQ-MMSMGCGVVPMMFPG-VQQYMPN 405
AIEY+KSLQ Q+Q MMS PMM G QQ+MP+
Sbjct: 297 AIEYVKSLQSQIQGMMS------PMMNAGNTQQFMPH 327
Score = 125 (49.1 bits), Expect = 1.7e-35, Sum P(2) = 1.7e-35
Identities = 34/90 (37%), Positives = 43/90 (47%)
Query: 32 EEDVMELLWQNGPVVLHNQNQRSLKKSQPSFPADQSAPRE--IPSSXXXXXXXXXXLFMQ 89
E+D++ELLWQ+G VV NQ R P S E P S LF+Q
Sbjct: 19 EDDIVELLWQSGQVVGTNQTHRQSYDPPPILRGSGSGRGEENAPLSQPPPHLHQQNLFIQ 78
Query: 90 EDEMASWLHYPLNDTNFDSDFCTDLLYPAP 119
E EM SWLH+ N+ FC++LL P
Sbjct: 79 EGEMYSWLHHSYRQ-NY---FCSELLNSTP 104
>TAIR|locus:2117773 [details] [associations]
symbol:AT4G28790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 EMBL:BT015828
EMBL:BT020214 IPI:IPI00521625 IPI:IPI00529771 IPI:IPI00915578
PIR:T04520 RefSeq:NP_194608.3 RefSeq:NP_974634.1 UniGene:At.31988
ProteinModelPortal:Q9SVU6 SMR:Q9SVU6 PRIDE:Q9SVU6
EnsemblPlants:AT4G28790.1 GeneID:829000 KEGG:ath:AT4G28790
TAIR:At4g28790 HOGENOM:HOG000240264 InParanoid:Q9SVU6
PhylomeDB:Q9SVU6 ProtClustDB:CLSN2680993 Genevestigator:Q9SVU6
Uniprot:Q9SVU6
Length = 413
Score = 298 (110.0 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 66/119 (55%), Positives = 88/119 (73%)
Query: 290 EDRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKM 349
++RKRK RE +VE + + ++R STS+KRSRAA +H LSERRRR +INE M
Sbjct: 247 DERKRKTRE------ETNVENQGTE---EARDSTSSKRSRAAIMHKLSERRRRQKINEMM 297
Query: 350 RALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVP-MMFPG--VQQYMPN 405
+ALQEL+PRC K+D++SMLD+ IEY+KSLQ Q+QM SMG ++P MM+ G QQYMP+
Sbjct: 298 KALQELLPRCTKTDRSSMLDDVIEYVKSLQSQIQMFSMGHVMIPPMMYAGNIQQQYMPH 356
Score = 100 (40.3 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 28/82 (34%), Positives = 39/82 (47%)
Query: 25 PRKSAMAEEDVMELLWQNGPVVLHNQNQRS------LKKSQPSFPADQSAPREIPSSXXX 78
P K M E+D++ELL ++ VV +Q Q + + S + + P P
Sbjct: 17 PEKYIMGEDDIVELLGKSSQVVTSSQTQTPSCDPPLILRGSGSGDGEGNGPLPQPPPPLY 76
Query: 79 XXXXXXXLFMQEDEMASWLHYP 100
LF+QEDEMASWLH P
Sbjct: 77 HQQS---LFIQEDEMASWLHQP 95
>TAIR|locus:4010713916 [details] [associations]
symbol:AT4G28815 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
PIR:H85335 PIR:T04518 EMBL:AJ577586 IPI:IPI00530422
RefSeq:NP_001078463.1 UniGene:At.71260 ProteinModelPortal:Q7XHI7
SMR:Q7XHI7 EnsemblPlants:AT4G28815.1 GeneID:5008171
KEGG:ath:AT4G28815 TAIR:At4g28815 eggNOG:NOG83291 PhylomeDB:Q7XHI7
Genevestigator:Q7XHI7 Uniprot:Q7XHI7
Length = 307
Score = 259 (96.2 bits), Expect = 1.2e-32, Sum P(3) = 1.2e-32
Identities = 50/85 (58%), Positives = 67/85 (78%)
Query: 317 KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLK 376
+++RGSTS KRSRAAE+HNL+ERRRR++INE+M+ LQ+LIPRCNKS K SML++ IEY+K
Sbjct: 138 EEARGSTSRKRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKSTKVSMLEDVIEYVK 197
Query: 377 SLQLQVQM----MSMGCGVVPMMFP 397
SL++Q+ M+MG P P
Sbjct: 198 SLEMQINQFMPHMAMGMNQPPAYIP 222
Score = 86 (35.3 bits), Expect = 1.2e-32, Sum P(3) = 1.2e-32
Identities = 25/88 (28%), Positives = 41/88 (46%)
Query: 32 EEDVMELLWQNGPVVLHNQNQRSLKKSQPSFPADQSAPREIPSSXXXXXXXXXXLFMQED 91
E+D++ELL + G + + + + + S +++ P P LF+QED
Sbjct: 23 EDDIVELLCKIGQTQIPSSDPLPILRGSGSGGREENTPLPPPLPHQN-------LFIQED 75
Query: 92 EMASWLHYPLNDTNFDSDFCTDLLYPAP 119
EM+SW H+PL S+ PAP
Sbjct: 76 EMSSWPHHPLRQDYLCSELYAST--PAP 101
Score = 37 (18.1 bits), Expect = 1.2e-32, Sum P(3) = 1.2e-32
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 207 SDTPAPGPDSRASEA 221
+ TPAP P S S A
Sbjct: 96 ASTPAPHPQSSVSLA 110
>TAIR|locus:2041369 [details] [associations]
symbol:PIL1 "phytochrome interacting factor 3-like 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009641 "shade
avoidance" evidence=IEP] [GO:0010017 "red or far-red light
signaling pathway" evidence=IEP;IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 EMBL:AC004411 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0010017 GO:GO:0009641 HOGENOM:HOG000115543
ProtClustDB:CLSN2680935 EMBL:AB090873 EMBL:AY219127 EMBL:AY954840
IPI:IPI00545843 PIR:T02190 RefSeq:NP_182220.2 UniGene:At.36425
ProteinModelPortal:Q8L5W8 SMR:Q8L5W8 IntAct:Q8L5W8 STRING:Q8L5W8
PRIDE:Q8L5W8 EnsemblPlants:AT2G46970.1 GeneID:819311
KEGG:ath:AT2G46970 TAIR:At2g46970 eggNOG:NOG291407
InParanoid:Q8L5W8 OMA:MELVCEN PhylomeDB:Q8L5W8
Genevestigator:Q8L5W8 Uniprot:Q8L5W8
Length = 416
Score = 277 (102.6 bits), Expect = 2.0e-27, Sum P(2) = 2.0e-27
Identities = 63/120 (52%), Positives = 81/120 (67%)
Query: 293 KRKGRETDDE---YHSEDVELESADAKKQSRGSTS---AKRSRAAEVHNLSERRRRDRIN 346
KRK + ++E Y S + + ES DAK Q T KR R+ EVH L ER+RRD N
Sbjct: 187 KRKYGDIEEEESTYLSNNSDDESDDAKTQVHARTRKPVTKRKRSTEVHKLYERKRRDEFN 246
Query: 347 EKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVV--PMMFPGVQQYMP 404
+KMRALQ+L+P C K DKAS+LDEAI+Y+++LQLQVQMMSMG G++ P M P + Y P
Sbjct: 247 KKMRALQDLLPNCYKDDKASLLDEAIKYMRTLQLQVQMMSMGNGLIRPPTMLP-MGHYSP 305
Score = 47 (21.6 bits), Expect = 2.0e-27, Sum P(2) = 2.0e-27
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 27 KSAMAEEDVMELLWQNGPV---VLHNQNQRSLKKSQ 59
K + +ED MEL+ +NG + + +N S +K +
Sbjct: 23 KPKLKDEDYMELVCENGQILAKIRRPKNNGSFQKQR 58
>TAIR|locus:2126876 [details] [associations]
symbol:UNE10 "AT4G00050" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009567
"double fertilization forming a zygote and endosperm" evidence=IMP]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0009506 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AL161471 HSSP:P22415 GO:GO:0009567
EMBL:AF069299 EMBL:AF488561 EMBL:AK117229 EMBL:BT025971
IPI:IPI00517893 PIR:T01333 RefSeq:NP_191916.3 UniGene:At.44779
ProteinModelPortal:Q8GZ38 SMR:Q8GZ38 IntAct:Q8GZ38
EnsemblPlants:AT4G00050.1 GeneID:828175 KEGG:ath:AT4G00050
TAIR:At4g00050 eggNOG:NOG239145 HOGENOM:HOG000084918
InParanoid:Q8GZ38 OMA:MMSRMNM PhylomeDB:Q8GZ38
ProtClustDB:CLSN2690671 Genevestigator:Q8GZ38 Uniprot:Q8GZ38
Length = 399
Score = 250 (93.1 bits), Expect = 2.7e-27, Sum P(2) = 2.7e-27
Identities = 54/103 (52%), Positives = 69/103 (66%)
Query: 300 DDEYHSEDVELESADAKKQS-RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPR 358
D HS ++E + KK + S S KRSRAA +HN SER+RRD+IN++M+ LQ+L+P
Sbjct: 184 DSVCHSRP-QMEDEEEKKAGGKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPN 242
Query: 359 CNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQ 401
+K+DKASMLDE IEYLK LQ QV MMS + MM P Q
Sbjct: 243 SSKTDKASMLDEVIEYLKQLQAQVSMMSR-MNMPSMMLPMAMQ 284
Score = 76 (31.8 bits), Expect = 2.7e-27, Sum P(2) = 2.7e-27
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 1 MNHCVPDFEFDDDHSIPTSSVLNRPRKSA-MAEEDVMELLWQNGPVVLH 48
M+ CVP+ DD + T++V + + + +V EL W+NG + LH
Sbjct: 1 MSQCVPNCHIDDTPAAATTTVRSTTAADIPILDYEVAELTWENGQLGLH 49
>UNIPROTKB|Q7FA23 [details] [associations]
symbol:OSJNBa0058K23.6 "Os04g0618600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP008210
EMBL:CM000141 EMBL:AL662970 RefSeq:NP_001053893.1 UniGene:Os.4548
EnsemblPlants:LOC_Os04g52770.1 GeneID:4337015 KEGG:osa:4337015
eggNOG:NOG275283 OMA:RSAEFHN ProtClustDB:CLSN2695118 Uniprot:Q7FA23
Length = 181
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 57/86 (66%), Positives = 72/86 (83%)
Query: 318 QSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKS 377
++R T +RSR+AE HN SERRRRDRINEK++ALQEL+P C K+DK SMLDEAI+YLKS
Sbjct: 2 EARRPTPTRRSRSAEFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKS 61
Query: 378 LQLQVQMMSMGCGVVPMMFPGVQQYM 403
LQLQ+QM+ MG G+ P++ P +QQYM
Sbjct: 62 LQLQLQMLVMGKGMAPVVPPELQQYM 87
>TAIR|locus:2115080 [details] [associations]
symbol:SPT "AT4G36930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009908 "flower
development" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009409 "response to cold" evidence=IMP] [GO:0010114 "response
to red light" evidence=IMP] [GO:0010187 "negative regulation of
seed germination" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048440 "carpel development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007623 "circadian
rhythm" evidence=IEP] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0007623 GO:GO:0009409 GO:GO:0003700 GO:GO:0006351
GO:GO:0010114 GO:GO:0010187 GO:GO:0048440 GO:GO:0010154
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:Z99707 EMBL:AL161590 EMBL:AF319540
EMBL:AK229267 EMBL:BT026462 IPI:IPI00541204 PIR:B85436
RefSeq:NP_568010.1 UniGene:At.4639 ProteinModelPortal:Q9FUA4
SMR:Q9FUA4 IntAct:Q9FUA4 STRING:Q9FUA4 EnsemblPlants:AT4G36930.1
GeneID:829847 KEGG:ath:AT4G36930 TAIR:At4g36930 eggNOG:NOG276771
HOGENOM:HOG000090429 InParanoid:Q9FUA4 OMA:NAPEMIN PhylomeDB:Q9FUA4
ProtClustDB:CLSN2917674 Genevestigator:Q9FUA4 GermOnline:AT4G36930
Uniprot:Q9FUA4
Length = 373
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 67/111 (60%), Positives = 79/111 (71%)
Query: 296 GRETDDEYHSEDVE-----LESADAKKQSRGS-TSAKRSRAAEVHNLSERRRRDRINEKM 349
G ETD EY E E ++ A + K S +S+KR RAAEVHNLSE+RRR RINEKM
Sbjct: 159 GNETD-EYDCESEEGGEAVVDEAPSSKSGPSSRSSSKRCRAAEVHNLSEKRRRSRINEKM 217
Query: 350 RALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM--GCGVVPMMFPG 398
+ALQ LIP NK+DKASMLDEAIEYLK LQLQVQM++M G + P+ PG
Sbjct: 218 KALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMRNGINLHPLCLPG 268
>UNIPROTKB|Q5VRS4 [details] [associations]
symbol:OSJNBa0015I14.14 "Basic helix-loop-helix protein
SPATULA-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 EMBL:CM000143
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AP002536 KEGG:dosa:Os06t0164400-01
Uniprot:Q5VRS4
Length = 315
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 60/83 (72%), Positives = 69/83 (83%)
Query: 309 ELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASML 368
E E+A A + RG + +KRSRAAEVHNLSE+RRR +INEKM+ALQ LIP NK+DKASML
Sbjct: 84 EPEAA-AGARPRGGSGSKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKASML 142
Query: 369 DEAIEYLKSLQLQVQMMSMGCGV 391
DEAIEYLK LQLQVQM+SM GV
Sbjct: 143 DEAIEYLKQLQLQVQMLSMRNGV 165
>UNIPROTKB|Q948F6 [details] [associations]
symbol:OSJNBa0049O12.18 "Putative SPATULA" species:4530
"Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AC069158
ProteinModelPortal:Q948F6 Gramene:Q948F6 Genevestigator:Q948F6
Uniprot:Q948F6
Length = 298
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 61/107 (57%), Positives = 80/107 (74%)
Query: 301 DEYHSEDVELESADAKKQSRGSTS-AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRC 359
D SE+ L S+++++ +R + KRSRAAEVHNLSE+RRR RINEKM+ALQ LIP
Sbjct: 4 DRCESEEA-LGSSESEQPTRPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNS 62
Query: 360 NKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVV--PMMFPGVQQYMP 404
+K+DKASMLD+AIEYLK LQLQVQM+SM G+ P+ G +++P
Sbjct: 63 SKTDKASMLDDAIEYLKQLQLQVQMLSMRNGLYLPPVNLSGAPEHLP 109
>TAIR|locus:2155503 [details] [associations]
symbol:ALC "AT5G67110" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0010047 "fruit dehiscence" evidence=IMP]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010047 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:BT028946 EMBL:AF488605 IPI:IPI00537617
IPI:IPI00846166 IPI:IPI00846501 RefSeq:NP_001078810.1
RefSeq:NP_001078811.1 RefSeq:NP_201512.1 UniGene:At.28825
HSSP:P36956 ProteinModelPortal:Q9FHA2 SMR:Q9FHA2 IntAct:Q9FHA2
STRING:Q9FHA2 EnsemblPlants:AT5G67110.1 GeneID:836846
KEGG:ath:AT5G67110 TAIR:At5g67110 eggNOG:NOG329583
HOGENOM:HOG000033902 InParanoid:Q9FHA2 OMA:HTRINET PhylomeDB:Q9FHA2
ProtClustDB:CLSN2686902 Genevestigator:Q9FHA2 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 Uniprot:Q9FHA2
Length = 210
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 50/78 (64%), Positives = 62/78 (79%)
Query: 324 SAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQ 383
S KR+ A+ HNLSE++RR +INEKM+ALQ+LIP NK+DKASMLDEAIEYLK LQLQVQ
Sbjct: 88 SLKRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQ 147
Query: 384 MMSM--GCGVVPMMFPGV 399
+++ G G+ PM P V
Sbjct: 148 TLAVMNGLGLNPMRLPQV 165
>TAIR|locus:2163163 [details] [associations]
symbol:PIF7 "AT5G61270" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0009416
"response to light stimulus" evidence=IDA] [GO:0009704
"de-etiolation" evidence=IMP] [GO:0016607 "nuclear speck"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016607
GO:GO:0003700 GO:GO:0006351 GO:GO:0003690 GO:GO:0009585
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB010073 HSSP:P22415
GO:GO:0009704 EMBL:AF488604 EMBL:BX831447 EMBL:AY568656
EMBL:AJ630484 EMBL:AK220640 IPI:IPI00537261 IPI:IPI00656604
RefSeq:NP_001032117.1 RefSeq:NP_200935.2 UniGene:At.29114
ProteinModelPortal:Q570R7 SMR:Q570R7 IntAct:Q570R7 STRING:Q570R7
EnsemblPlants:AT5G61270.1 GeneID:836248 KEGG:ath:AT5G61270
TAIR:At5g61270 eggNOG:NOG286182 HOGENOM:HOG000097081
InParanoid:Q9FLK6 OMA:HNESERR PhylomeDB:Q570R7
ProtClustDB:CLSN2681114 Genevestigator:Q570R7 Uniprot:Q570R7
Length = 366
Score = 227 (85.0 bits), Expect = 3.3e-19, Sum P(2) = 3.3e-19
Identities = 49/109 (44%), Positives = 70/109 (64%)
Query: 294 RKGRETDDEYHSEDVELESADAKKQ-SRGS---TSAKRSRAAEVHNLSERRRRDRINEKM 349
+ R D +Y E + + +Q +RG ++ +R RAA +HN SERRRRDRIN++M
Sbjct: 127 KTARTGDRDYFRSGSETQDTEGDEQETRGEAGRSNGRRGRAAAIHNESERRRRDRINQRM 186
Query: 350 RALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVP-MMFP 397
R LQ+L+P +K+DK S+LD+ IE+LK LQ QVQ MS+ + MM P
Sbjct: 187 RTLQKLLPTASKADKVSILDDVIEHLKQLQAQVQFMSLRANLPQQMMIP 235
Score = 48 (22.0 bits), Expect = 3.3e-19, Sum P(2) = 3.3e-19
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 30 MAEEDVMELLWQNGPVVLH 48
M+ V EL W+NG + +H
Sbjct: 1 MSNYGVKELTWENGQLTVH 19
>TAIR|locus:2098008 [details] [associations]
symbol:PIL2 "phytochrome interacting factor 3-like 2"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0010017 "red or far-red light signaling
pathway" evidence=IEP] [GO:0010089 "xylem development"
evidence=RCA] [GO:0044036 "cell wall macromolecule metabolic
process" evidence=RCA] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 GO:GO:0010017
EMBL:AL138651 EMBL:AB090874 EMBL:BT033108 IPI:IPI00525935
IPI:IPI00846835 PIR:T48001 RefSeq:NP_001078329.1 RefSeq:NP_191768.2
UniGene:At.1005 UniGene:At.50304 ProteinModelPortal:Q8L5W7
SMR:Q8L5W7 IntAct:Q8L5W7 STRING:Q8L5W7 EnsemblPlants:AT3G62090.2
GeneID:825382 KEGG:ath:AT3G62090 TAIR:At3g62090 eggNOG:NOG305930
HOGENOM:HOG000115543 InParanoid:Q8L5W7 OMA:ETNMLES PhylomeDB:Q8L5W7
ProtClustDB:CLSN2680935 Genevestigator:Q8L5W7 Uniprot:Q8L5W7
Length = 363
Score = 212 (79.7 bits), Expect = 9.8e-17, Sum P(2) = 9.8e-17
Identities = 55/115 (47%), Positives = 67/115 (58%)
Query: 291 DRKRKGRETDDE---YHSEDVELESADAKKQSRGSTS---AKRSRAAEVHNLSERRRRDR 344
D G D E Y S ++ ES DA+ Q T KR R AE +N ER +R+
Sbjct: 144 DTSSVGFTEDSEGSMYLSSSLDDESDDARPQVPARTRKALVKRKRNAEAYNSPERNQRND 203
Query: 345 INEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCG-VVP-MMFP 397
IN+KMR LQ L+P +K D SMLDEAI Y+ +LQLQVQMM+MG V P MM P
Sbjct: 204 INKKMRTLQNLLPNSHKDDNESMLDEAINYMTNLQLQVQMMTMGNRFVTPSMMMP 258
Score = 46 (21.3 bits), Expect = 9.8e-17, Sum P(2) = 9.8e-17
Identities = 10/35 (28%), Positives = 22/35 (62%)
Query: 30 MAEEDVMELLWQNGPVV---------LHNQNQRSL 55
+++++ MEL+++NG ++ LHNQ +S+
Sbjct: 12 LSDQEYMELVFENGQILAKGQRSNVSLHNQRTKSI 46
>TAIR|locus:2126624 [details] [associations]
symbol:LRL2 "AT4G30980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL022198
EMBL:AL161578 HOGENOM:HOG000239571 GO:GO:0080147
ProtClustDB:CLSN2683027 EMBL:AF488601 IPI:IPI00524968 PIR:G85362
RefSeq:NP_194827.2 UniGene:At.31786 ProteinModelPortal:Q8S3D5
SMR:Q8S3D5 EnsemblPlants:AT4G30980.1 GeneID:829223
KEGG:ath:AT4G30980 TAIR:At4g30980 eggNOG:NOG295725
InParanoid:O65552 OMA:GGSHENT PhylomeDB:Q8S3D5
Genevestigator:Q8S3D5 Uniprot:Q8S3D5
Length = 310
Score = 209 (78.6 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 40/75 (53%), Positives = 60/75 (80%)
Query: 313 ADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAI 372
A A+ Q++ A+R +A + H+++ER RR+RI E+M++LQEL+P NK+DKASMLDE I
Sbjct: 120 ATAQPQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEII 179
Query: 373 EYLKSLQLQVQMMSM 387
+Y+K LQLQV+++SM
Sbjct: 180 DYVKFLQLQVKVLSM 194
>TAIR|locus:2047555 [details] [associations]
symbol:LRL1 "AT2G24260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC005967
HOGENOM:HOG000239571 GO:GO:0080147 EMBL:AF488599 EMBL:AK176370
EMBL:AK176390 EMBL:BT026512 IPI:IPI00528969 PIR:E84634
RefSeq:NP_180003.1 UniGene:At.20792 ProteinModelPortal:Q9ZUG9
SMR:Q9ZUG9 EnsemblPlants:AT2G24260.1 GeneID:816961
KEGG:ath:AT2G24260 TAIR:At2g24260 eggNOG:NOG284260
InParanoid:Q9ZUG9 OMA:STATCHS PhylomeDB:Q9ZUG9
ProtClustDB:CLSN2683027 Genevestigator:Q9ZUG9 Uniprot:Q9ZUG9
Length = 350
Score = 212 (79.7 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 42/73 (57%), Positives = 58/73 (79%)
Query: 315 AKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEY 374
A QSR A+R +A + H+++ER RR+RI E+M+ALQEL+P NK+DKASMLDE I+Y
Sbjct: 130 APPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDY 189
Query: 375 LKSLQLQVQMMSM 387
+K LQLQV+++SM
Sbjct: 190 VKFLQLQVKVLSM 202
>UNIPROTKB|Q69Y51 [details] [associations]
symbol:P0698A06.26-2 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP003514
ProteinModelPortal:Q69Y51 EnsemblPlants:LOC_Os06g09370.3
Gramene:Q69Y51 HOGENOM:HOG000241730 Uniprot:Q69Y51
Length = 401
Score = 210 (79.0 bits), Expect = 7.0e-15, P = 7.0e-15
Identities = 43/87 (49%), Positives = 64/87 (73%)
Query: 304 HSEDVELESADAKKQSRGS---TSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCN 360
HS DVE ++ A S + T A+R +A + H+++ER RR++I+E+M+ LQ L+P N
Sbjct: 217 HSSDVEPQANSAPGNSANAKPRTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSN 276
Query: 361 KSDKASMLDEAIEYLKSLQLQVQMMSM 387
K+DKASMLDE I+Y+K LQLQV+++SM
Sbjct: 277 KADKASMLDEIIDYVKFLQLQVKVLSM 303
>TAIR|locus:2147760 [details] [associations]
symbol:LRL3 "AT5G58010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0080147 "root hair cell development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P36956 HOGENOM:HOG000239571 GO:GO:0080147
EMBL:AB026635 EMBL:AF488614 IPI:IPI00540554 RefSeq:NP_200609.1
UniGene:At.29300 ProteinModelPortal:Q9LSQ3 SMR:Q9LSQ3 PRIDE:Q9LSQ3
EnsemblPlants:AT5G58010.1 GeneID:835913 KEGG:ath:AT5G58010
TAIR:At5g58010 eggNOG:NOG252939 InParanoid:Q9LSQ3 OMA:TEQRVAK
PhylomeDB:Q9LSQ3 ProtClustDB:CLSN2916934 Genevestigator:Q9LSQ3
Uniprot:Q9LSQ3
Length = 297
Score = 202 (76.2 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 41/80 (51%), Positives = 60/80 (75%)
Query: 308 VELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASM 367
V SA +Q + A+R +A + H+++ER RR+RI E+M++LQEL+P NK+DKASM
Sbjct: 85 VSTTSAPVVRQ-KPRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASM 143
Query: 368 LDEAIEYLKSLQLQVQMMSM 387
LDE IEY++ LQLQV+++SM
Sbjct: 144 LDEIIEYVRFLQLQVKVLSM 163
>UNIPROTKB|Q7Y1H4 [details] [associations]
symbol:OSJNBa0094F01.11 "Putative uncharacterized protein
OSJNBa0094F01.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0009567
EMBL:AC093713 EMBL:AK104412 RefSeq:NP_001051563.1 UniGene:Os.27522
EnsemblPlants:LOC_Os03g58330.1 GeneID:4334429 KEGG:osa:4334429
OMA:TDGTERQ ProtClustDB:CLSN2694399 Uniprot:Q7Y1H4
Length = 294
Score = 197 (74.4 bits), Expect = 5.1e-14, P = 5.1e-14
Identities = 39/80 (48%), Positives = 59/80 (73%)
Query: 320 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 379
R A+R +A + H+++ER RR+RI E+MRALQEL+P NK+D+A+MLDE ++Y+K L+
Sbjct: 130 RPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR 189
Query: 380 LQVQMMSM----GCGVVPMM 395
LQV+++SM G G V +
Sbjct: 190 LQVKVLSMSRLGGAGAVAQL 209
>UNIPROTKB|Q94LR3 [details] [associations]
symbol:OSJNBa0010C11.7 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC069300 RefSeq:NP_001065353.1
UniGene:Os.27587 IntAct:Q94LR3 STRING:Q94LR3 GeneID:4349351
KEGG:osa:4349351 ProtClustDB:CLSN2714538 Uniprot:Q94LR3
Length = 191
Score = 183 (69.5 bits), Expect = 7.6e-14, P = 7.6e-14
Identities = 36/59 (61%), Positives = 48/59 (81%)
Query: 337 SERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMS-MGCGVVPM 394
+ +RRDRIN+KM+ LQ+L+P +K+DKASMLDE I+YLK LQ QVQ+MS MG ++PM
Sbjct: 9 NNHKRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIDYLKQLQAQVQVMSRMGSMMMPM 67
>TAIR|locus:2201906 [details] [associations]
symbol:AT1G10120 "AT1G10120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC004122 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:BT012655 EMBL:AK221806 EMBL:AK229309
EMBL:AK230347 EMBL:AF488606 IPI:IPI00541831 PIR:T00632
RefSeq:NP_172483.4 UniGene:At.43391 UniGene:At.69296
ProteinModelPortal:Q6NKN9 SMR:Q6NKN9 EnsemblPlants:AT1G10120.1
GeneID:837549 KEGG:ath:AT1G10120 TAIR:At1g10120 eggNOG:NOG271189
HOGENOM:HOG000090626 InParanoid:Q6NKN9 OMA:GESSHED PhylomeDB:Q6NKN9
ProtClustDB:CLSN2681496 Genevestigator:Q6NKN9 Uniprot:Q6NKN9
Length = 366
Score = 197 (74.4 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 44/104 (42%), Positives = 67/104 (64%)
Query: 291 DRKRKGRETDDEYHSEDVEL-ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKM 349
D+ +K + D + + E +S +A K++ A+R +A H+L+ER RR++I+E+M
Sbjct: 173 DQSQKKHKNDQSKETVNKESSQSEEAPKENYIHMRARRGQATNSHSLAERVRREKISERM 232
Query: 350 RALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSMGCGVV 392
R LQEL+P CNK + KA MLDE I Y++SLQ QV+ +SM V
Sbjct: 233 RLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATV 276
>UNIPROTKB|Q2QMM0 [details] [associations]
symbol:LOC_Os12g40710 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 Gramene:Q2QMM0 Uniprot:Q2QMM0
Length = 266
Score = 188 (71.2 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 45/110 (40%), Positives = 70/110 (63%)
Query: 304 HSEDVELESADAKKQSRGSTSA--KRSR---AAEVHNLSERRRRDRINEKMRALQELIPR 358
+ ++ +S + KK+ + ++SA K SR AA HNL+E+RRR +I E+ R LQ L+P
Sbjct: 52 NKDEASDDSGERKKKKKKASSAAGKASRHRHAAGAHNLTEKRRRFKITERFRTLQRLVPG 111
Query: 359 C-NKSDKASMLDEAIEYLKSLQLQVQMMS-MGCGVVPMMFPGV---QQYM 403
C NKS++AS LD+ I+Y+KSLQ Q++ S +G +++P Q YM
Sbjct: 112 CDNKSNQASTLDQTIQYMKSLQHQLEATSAVGSPAAAVLYPAAVHPQSYM 161
>UNIPROTKB|Q84T08 [details] [associations]
symbol:OSJNBa0087C10.10 "BHLH transcription factor,
putative, expressed" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC108906 RefSeq:NP_001051605.1
UniGene:Os.33544 STRING:Q84T08 EnsemblPlants:LOC_Os03g58830.1
GeneID:4334471 KEGG:osa:4334471 OMA:GTSTSEW ProtClustDB:CLSN2694415
Uniprot:Q84T08
Length = 265
Score = 182 (69.1 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 44/115 (38%), Positives = 68/115 (59%)
Query: 294 RKGRETDDEYHSE--DVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRA 351
R ETD S+ D + KQ A+R +A + H+L+ER RR++I+E+M+
Sbjct: 105 RTEAETDSRNASKSGDQNPPPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKI 164
Query: 352 LQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQMMSMGCGVVPM-MFPGVQQYMP 404
LQ+L+P CNK KAS+LDE I Y+++LQ QV+ +SM V + G++ + P
Sbjct: 165 LQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSMKLEAVNAHVNNGIEAFPP 219
Score = 37 (18.1 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 201 STVVDSSDTPAPGPDSRASEAMR-SMEGASGVNNNNR 236
S +V +S G D SEA R +SG N++ R
Sbjct: 69 SRIVSTSGGGGGGQDLTDSEAKRFKASKSSGDNSSLR 105
>TAIR|locus:2132303 [details] [associations]
symbol:UNE12 "AT4G02590" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009567 "double fertilization forming a zygote and endosperm"
evidence=IMP] [GO:0031347 "regulation of defense response"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0007275 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000239571
ProtClustDB:CLSN2687635 EMBL:AC002330 EMBL:AL161494 GO:GO:0031347
GO:GO:0009567 EMBL:AF488592 EMBL:AF367328 EMBL:AY143951
EMBL:AY088218 IPI:IPI00545077 IPI:IPI00892352 PIR:T01090
RefSeq:NP_001031577.1 RefSeq:NP_001118919.1 RefSeq:NP_567245.1
UniGene:At.20028 ProteinModelPortal:O22768 SMR:O22768 IntAct:O22768
PaxDb:O22768 PRIDE:O22768 EnsemblPlants:AT4G02590.1
EnsemblPlants:AT4G02590.2 GeneID:828126 KEGG:ath:AT4G02590
TAIR:At4g02590 eggNOG:euNOG02041 InParanoid:O22768 OMA:PAWEKWS
PhylomeDB:O22768 Genevestigator:O22768 Uniprot:O22768
Length = 310
Score = 193 (73.0 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 41/101 (40%), Positives = 68/101 (67%)
Query: 303 YHSEDVELESADAKKQS---RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRC 359
+H + ++ A Q R A+R +A + H+++ER RR+RI E++RALQEL+P
Sbjct: 123 FHGQPMQQPPPSAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTV 182
Query: 360 NKSDKASMLDEAIEYLKSLQLQVQMMSM----GCGVV-PMM 395
NK+D+A+M+DE ++Y+K L+LQV+++SM G G V P++
Sbjct: 183 NKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLV 223
>TAIR|locus:505006688 [details] [associations]
symbol:AT5G50915 "AT5G50915" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0009739 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB017063 EMBL:AF428350 EMBL:AY057549 EMBL:AY113059
EMBL:AY087602 IPI:IPI00536793 RefSeq:NP_568745.1 RefSeq:NP_851163.1
UniGene:At.23601 ProteinModelPortal:Q93W88 SMR:Q93W88
EnsemblPlants:AT5G50915.1 EnsemblPlants:AT5G50915.2 GeneID:835164
KEGG:ath:AT5G50915 TAIR:At5g50915 eggNOG:NOG262059
HOGENOM:HOG000242938 InParanoid:Q93W88 OMA:ISERMRT PhylomeDB:Q93W88
ProtClustDB:CLSN2689980 Genevestigator:Q93W88 Uniprot:Q93W88
Length = 286
Score = 190 (71.9 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 45/116 (38%), Positives = 74/116 (63%)
Query: 293 KRKGRETDDEYHSEDVELESADAKKQSRGSTS----------AKRSRAAEVHNLSERRRR 342
K +GR+ + +S++ +E +KKQ RGS A+R +A + H+L+ER RR
Sbjct: 97 KTRGRKARNSNNSKE-GVEGRKSKKQKRGSKEEPPTDYIHVRARRGQATDSHSLAERVRR 155
Query: 343 DRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSMGC-GVVPMMF 396
++I+E+MR LQ L+P C+K + KA MLDE I Y+++LQ QV+ +SM + P+++
Sbjct: 156 EKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFLSMKLTSISPVVY 211
>TAIR|locus:2202867 [details] [associations]
symbol:BPEp "AT1G59640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048446 "petal morphogenesis" evidence=IMP] [GO:0009062 "fatty
acid catabolic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009753 "response to jasmonic
acid stimulus" evidence=RCA] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0048441 "petal development" evidence=RCA] [GO:0048443 "stamen
development" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 EMBL:AM269753 EMBL:AM269754
EMBL:AC009317 EMBL:BT003964 EMBL:BT005064 EMBL:AY086373
EMBL:AB028232 IPI:IPI00530097 IPI:IPI00531813 PIR:B96620 PIR:T52428
RefSeq:NP_564749.1 RefSeq:NP_849829.1 UniGene:At.455
ProteinModelPortal:Q0JXE7 SMR:Q0JXE7 IntAct:Q0JXE7 STRING:Q0JXE7
PRIDE:Q0JXE7 EnsemblPlants:AT1G59640.2 GeneID:842254
KEGG:ath:AT1G59640 TAIR:At1g59640 eggNOG:NOG296410
InParanoid:Q0JXE7 OMA:RGASPEW PhylomeDB:Q0JXE7
ProtClustDB:CLSN2688917 Genevestigator:Q0JXE7 GO:GO:0048446
Uniprot:Q0JXE7
Length = 343
Score = 194 (73.4 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 46/123 (37%), Positives = 76/123 (61%)
Query: 290 EDRKRKGRET-DDEYHSEDVELESADAKKQSRGSTS-----AKRSRAAEVHNLSERRRRD 343
E++++K E D + +E + E+ K+Q + A+R +A + H+L+ER RR+
Sbjct: 97 ENKRQKIDEVCDGKAEAESLGTETEQKKQQMEPTKDYIHVRARRGQATDSHSLAERARRE 156
Query: 344 RINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQMMSMGCGVV-PMMFPGVQQ 401
+I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ QV+ +SM V M PG++
Sbjct: 157 KISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNPGIEV 216
Query: 402 YMP 404
+ P
Sbjct: 217 FPP 219
>TAIR|locus:2205420 [details] [associations]
symbol:AT1G68920 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC011665 EMBL:AF488584 EMBL:AY128299
EMBL:BT002259 IPI:IPI00536565 IPI:IPI00545990 PIR:G96713
RefSeq:NP_001031255.1 RefSeq:NP_177058.1 RefSeq:NP_849863.2
UniGene:At.28096 ProteinModelPortal:Q9CAA9 SMR:Q9CAA9 STRING:Q9CAA9
EnsemblPlants:AT1G68920.1 EnsemblPlants:AT1G68920.2 GeneID:843225
KEGG:ath:AT1G68920 TAIR:At1g68920 eggNOG:NOG301979
HOGENOM:HOG000238007 InParanoid:Q3E6P7 OMA:MLKGGIF PhylomeDB:Q9CAA9
ProtClustDB:CLSN2682343 Genevestigator:Q9CAA9 Uniprot:Q9CAA9
Length = 486
Score = 184 (69.8 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 40/87 (45%), Positives = 58/87 (66%)
Query: 311 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLD 369
+S+D K A+R +A H+L+ER RR++I+E+M+ LQ+L+P CNK + KA MLD
Sbjct: 291 QSSDPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLD 350
Query: 370 EAIEYLKSLQLQVQMMSMGCGVV-PMM 395
E I Y++SLQ QV+ +SM V P M
Sbjct: 351 EIINYVQSLQRQVEFLSMKLATVNPQM 377
Score = 52 (23.4 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 17/51 (33%), Positives = 21/51 (41%)
Query: 190 PSNSKSVTIRESTVVDSSDTPAPGPDS-RASEAMRSMEGASGVNNNNRCRN 239
P N SV ++ESTV S P S SE +S G +G N
Sbjct: 185 PHNDVSVAVKESTVRSSEQAKPNVPGSGNVSEDTQS-SGGNGQKGRETSSN 234
>TAIR|locus:2204898 [details] [associations]
symbol:HFR1 "AT1G02340" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009585 "red, far-red light
phototransduction" evidence=TAS] [GO:0009642 "response to light
intensity" evidence=IEP] [GO:0009785 "blue light signaling pathway"
evidence=TAS] [GO:0003712 "transcription cofactor activity"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009738
"abscisic acid mediated signaling pathway" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634 GO:GO:0009738
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0003712
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC064879
GO:GO:0009642 GO:GO:0009785 EMBL:AF288287 EMBL:AF324245
EMBL:AF323182 EMBL:AK117248 IPI:IPI00545685 PIR:G86153
RefSeq:NP_563650.1 UniGene:At.24795 ProteinModelPortal:Q9FE22
SMR:Q9FE22 IntAct:Q9FE22 STRING:Q9FE22 PRIDE:Q9FE22
EnsemblPlants:AT1G02340.1 GeneID:839300 KEGG:ath:AT1G02340
TAIR:At1g02340 eggNOG:NOG274868 HOGENOM:HOG000112891 OMA:FSSHAMR
PhylomeDB:Q9FE22 ProtClustDB:CLSN2916946 Genevestigator:Q9FE22
GermOnline:AT1G02340 Uniprot:Q9FE22
Length = 292
Score = 179 (68.1 bits), Expect = 8.9e-13, Sum P(2) = 8.9e-13
Identities = 36/62 (58%), Positives = 49/62 (79%)
Query: 337 SERRRRD-RINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVPMM 395
S+RRRRD +++ KMR LQ+L+P C+K+DK S+LD+ IEY+K+LQLQ+QMMS GV P
Sbjct: 141 SKRRRRDEKMSNKMRKLQQLVPNCHKTDKVSVLDKTIEYMKNLQLQLQMMST-VGVNPYF 199
Query: 396 FP 397
P
Sbjct: 200 LP 201
Score = 43 (20.2 bits), Expect = 8.9e-13, Sum P(2) = 8.9e-13
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 298 ETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEV 333
ETDD +H +D E +D + R + R +V
Sbjct: 85 ETDDHHHIKDFS-ERSDHRFYLRNKHENPKKRRIQV 119
>TAIR|locus:2007534 [details] [associations]
symbol:AT1G03040 "AT1G03040" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF251692
EMBL:AC006550 EMBL:AY054469 EMBL:AY114633 IPI:IPI00529284
PIR:B86161 RefSeq:NP_001184895.1 RefSeq:NP_563672.1
UniGene:At.20497 ProteinModelPortal:Q93Y00 SMR:Q93Y00 IntAct:Q93Y00
PaxDb:Q93Y00 PRIDE:Q93Y00 EnsemblPlants:AT1G03040.1 GeneID:839446
KEGG:ath:AT1G03040 TAIR:At1g03040 eggNOG:NOG281566
HOGENOM:HOG000239571 InParanoid:Q93Y00 OMA:SIVKPEM PhylomeDB:Q93Y00
ProtClustDB:CLSN2687635 Genevestigator:Q93Y00 Uniprot:Q93Y00
Length = 302
Score = 187 (70.9 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 37/81 (45%), Positives = 61/81 (75%)
Query: 320 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 379
R A+R +A + H+++ER RR+RI E++R+LQEL+P NK+D+A+M+DE ++Y+K L+
Sbjct: 141 RPRVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKTDRAAMIDEIVDYVKFLR 200
Query: 380 LQVQMMSM----GCGVV-PMM 395
LQV+++SM G G V P++
Sbjct: 201 LQVKVLSMSRLGGAGAVAPLV 221
>UNIPROTKB|Q8GZV6 [details] [associations]
symbol:OJ1017C11.10 "Putative uncharacterized protein
OJ1017C11.10" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR001810
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50181 PROSITE:PS50888
SMART:SM00256 SMART:SM00353 GO:GO:0005634 SUPFAM:SSF81383
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR019955
PROSITE:PS50053 EMBL:AC135157 ProteinModelPortal:Q8GZV6
Gramene:Q8GZV6 Uniprot:Q8GZV6
Length = 776
Score = 196 (74.1 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 43/92 (46%), Positives = 61/92 (66%)
Query: 297 RETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELI 356
RE E+ E + ADA ++ AKR +A H+L+ER RR++INE+M+ LQ+L+
Sbjct: 604 RELSMEHAGE--KAGDADASREEYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLV 661
Query: 357 PRCNK-SDKASMLDEAIEYLKSLQLQVQMMSM 387
P CNK + KA MLDE I Y++SLQ QV+ +SM
Sbjct: 662 PGCNKITGKAMMLDEIINYVQSLQRQVEFLSM 693
>TAIR|locus:2115200 [details] [associations]
symbol:BEE2 "AT4G36540" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
PROSITE:PS00678 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161589 EMBL:Z99708
EMBL:AF488591 EMBL:AF370231 EMBL:AY059122 EMBL:AY054588
EMBL:BT000388 EMBL:AY084997 EMBL:AY138254 IPI:IPI00540245
IPI:IPI00548266 PIR:D85431 RefSeq:NP_195372.1 RefSeq:NP_849508.1
UniGene:At.25403 ProteinModelPortal:Q93VJ4 SMR:Q93VJ4 IntAct:Q93VJ4
PRIDE:Q93VJ4 EnsemblPlants:AT4G36540.1 GeneID:829806
KEGG:ath:AT4G36540 TAIR:At4g36540 eggNOG:NOG240651
InParanoid:Q93VJ4 OMA:ELECHID PhylomeDB:Q93VJ4
ProtClustDB:CLSN2685556 Genevestigator:Q93VJ4 Uniprot:Q93VJ4
Length = 304
Score = 182 (69.1 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 36/82 (43%), Positives = 57/82 (69%)
Query: 312 SADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDE 370
S++ +K A+R A + H+L+ER RR++I++KM+ LQ+++P CNK + KA MLDE
Sbjct: 130 SSEIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDE 189
Query: 371 AIEYLKSLQLQVQMMSMGCGVV 392
I Y++SLQ QV+ +SM V+
Sbjct: 190 IINYVQSLQQQVEFLSMKLSVI 211
Score = 39 (18.8 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 91 DEMASWLHYPLNDTNFDS-DFC 111
DE+ S+ H+P ++D+ D C
Sbjct: 46 DELQSFRHFPEFGPDYDTTDGC 67
>UNIPROTKB|Q75M33 [details] [associations]
symbol:P0668H12.5 "BHLH transcription factor" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008211 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000142 EMBL:AC084818 EMBL:AC073405 EMBL:HQ858853
EMBL:AK065864 RefSeq:NP_001054390.1 UniGene:Os.23082
EnsemblPlants:LOC_Os05g01256.1 EnsemblPlants:LOC_Os05g01256.2
GeneID:4337537 KEGG:osa:4337537 eggNOG:NOG296531 Uniprot:Q75M33
Length = 339
Score = 187 (70.9 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 44/119 (36%), Positives = 74/119 (62%)
Query: 293 KRKGRETDDEYHSEDVELESADAK--KQSRG--STSAKRSRAAEVHNLSERRRRDRINEK 348
++K R H +DV+ ++ +A + G A+R +A + H+L+ER RR++I+E+
Sbjct: 146 EKKARRVVLHQHDDDVKKKAKEAAGGEPPAGYIHVRARRGQATDSHSLAERVRREKISER 205
Query: 349 MRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSMG-CGVVPMMF---PGVQQY 402
M+ LQ L+P C+K + KA MLDE I Y++SLQ QV+ +SM + P+M+ PG+ +
Sbjct: 206 MKMLQSLVPGCDKVTGKALMLDEIISYVQSLQNQVEFLSMKLASLSPLMYEFGPGIDMH 264
>TAIR|locus:2028804 [details] [associations]
symbol:CIB5 "AT1G26260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009911 "positive regulation of flower development"
evidence=IGI] [GO:0048513 "organ development" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC079829 GO:GO:0009911
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238007
EMBL:AK117355 EMBL:BT005334 EMBL:AJ630483 EMBL:AY568655
EMBL:AF488608 IPI:IPI00529982 IPI:IPI00547855 PIR:H86388
RefSeq:NP_001031093.1 RefSeq:NP_173950.1 RefSeq:NP_973913.1
UniGene:At.41276 ProteinModelPortal:Q9C670 SMR:Q9C670 IntAct:Q9C670
STRING:Q9C670 EnsemblPlants:AT1G26260.1 EnsemblPlants:AT1G26260.2
GeneID:839167 KEGG:ath:AT1G26260 TAIR:At1g26260 eggNOG:NOG284637
InParanoid:Q9C670 OMA:ETHGYES PhylomeDB:Q9C670
ProtClustDB:CLSN2682645 Genevestigator:Q9C670 Uniprot:Q9C670
Length = 390
Score = 188 (71.2 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 41/109 (37%), Positives = 70/109 (64%)
Query: 290 EDRKRKGRETD-DEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEK 348
ED+K+K ++ + + E + +D+ K A+R +A H+L+ER RR++I+E+
Sbjct: 189 EDKKQKDEQSPTSNANKTNSEKQPSDSLKDGYIHMRARRGQATNSHSLAERVRREKISER 248
Query: 349 MRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSMGCGVV-PMM 395
M+ LQ+L+P C+K + KA MLDE I Y++SLQ Q++ +SM V P++
Sbjct: 249 MKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLSMKLSAVNPVL 297
>UNIPROTKB|Q6Z2G7 [details] [associations]
symbol:P0680A05.9 "Putative bHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008208 eggNOG:NOG251551 EMBL:AP005323 EMBL:AK119183
RefSeq:NP_001047868.1 UniGene:Os.7751
EnsemblPlants:LOC_Os02g47660.1 GeneID:4330462 KEGG:osa:4330462
OMA:TVESLCQ ProtClustDB:CLSN2693116 Uniprot:Q6Z2G7
Length = 361
Score = 186 (70.5 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 46/103 (44%), Positives = 64/103 (62%)
Query: 291 DRKRKGRETDDEYHS-EDVELESADA----KKQSRGSTSAKRSRAAEVHNLSERRRRDRI 345
+R R G + E S +D SA +K A+R +A + H+L+ER RR+RI
Sbjct: 127 ERARPGAKKKAEVASPKDSPATSASTVTAGQKTDYIHVRARRGQATDSHSLAERVRRERI 186
Query: 346 NEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSM 387
+E+MR LQEL+P CNK + KA MLDE I Y++SLQ QV+ +SM
Sbjct: 187 SERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEFLSM 229
>UNIPROTKB|Q69WS3 [details] [associations]
symbol:OJ1118_E12.15 "Putative bHLH protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003743
ProteinModelPortal:Q69WS3 Gramene:Q69WS3 Uniprot:Q69WS3
Length = 268
Score = 180 (68.4 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 38/95 (40%), Positives = 59/95 (62%)
Query: 292 RKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRA 351
R G ++ + + D + KQ A+R +A + H+L+ER RR++I+E+M+
Sbjct: 97 RTEAGTDSGNSSKAADKNATPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKI 156
Query: 352 LQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQMM 385
LQ+L+P CNK KAS+LDE I Y++SLQ QV+ M
Sbjct: 157 LQDLVPGCNKVIGKASVLDEIINYIQSLQHQVEFM 191
>UNIPROTKB|Q6Z7E7 [details] [associations]
symbol:P0020C11.18 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:CM000139
EMBL:AP004865 EMBL:AK241924 EnsemblPlants:LOC_Os02g35660.1
OMA:TTAMQYL Uniprot:Q6Z7E7
Length = 524
Score = 189 (71.6 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 38/76 (50%), Positives = 60/76 (78%)
Query: 325 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 384
A+R +A + H+++ER RR++I+++M+ LQEL+P NK++KASMLDE I+Y+K LQLQV++
Sbjct: 316 ARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNKTNKASMLDEIIDYVKFLQLQVKV 375
Query: 385 MSM---GCG--VVPMM 395
+SM G VVP++
Sbjct: 376 LSMSRLGAAEAVVPLL 391
>TAIR|locus:2032990 [details] [associations]
symbol:CES "AT1G25330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:2000488 "positive regulation of brassinosteroid biosynthetic
process" evidence=IMP] [GO:0048441 "petal development"
evidence=RCA] [GO:0048443 "stamen development" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG264296 EMBL:AC079374 EMBL:DQ446289 EMBL:DQ652859
EMBL:AK175757 EMBL:AY088885 EMBL:AF488607 IPI:IPI00519962
PIR:B86383 PIR:D86381 RefSeq:NP_564229.1 UniGene:At.48236
UniGene:At.63980 ProteinModelPortal:A4D998 SMR:A4D998
EnsemblPlants:AT1G25330.1 GeneID:839117 KEGG:ath:AT1G25330
GeneFarm:2907 TAIR:At1g25330 InParanoid:A4D998 PhylomeDB:A4D998
Genevestigator:A4D998 GO:GO:2000488 Uniprot:A4D998
Length = 223
Score = 167 (63.8 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 38/103 (36%), Positives = 64/103 (62%)
Query: 293 KRKGRETDD-----EYHSEDVELESADAKKQSRG--STSAKRSRAAEVHNLSERRRRDRI 345
+RKG + + SE+ E + D ++ + AKR +A + H+L+ER RR++I
Sbjct: 67 RRKGNKEESGSKRRRKRSEEEEAMNGDETQKPKDVVHVRAKRGQATDSHSLAERVRREKI 126
Query: 346 NEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQMMSM 387
NE+++ LQ+L+P C K+ A MLD I+Y++SLQ Q++ +SM
Sbjct: 127 NERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQIEFLSM 169
>TAIR|locus:2139484 [details] [associations]
symbol:CIB1 "AT4G34530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IDA]
[GO:0009911 "positive regulation of flower development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0009911
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161585 EMBL:AL023094
HOGENOM:HOG000238007 EMBL:AF488596 EMBL:AK117846 EMBL:AY120741
EMBL:BT005313 IPI:IPI00519970 PIR:T05273 RefSeq:NP_195179.2
UniGene:At.48937 ProteinModelPortal:Q8GY61 SMR:Q8GY61
DIP:DIP-59356N IntAct:Q8GY61 PRIDE:Q8GY61 EnsemblPlants:AT4G34530.1
GeneID:829604 KEGG:ath:AT4G34530 TAIR:At4g34530 eggNOG:NOG251551
InParanoid:Q8GY61 OMA:SGYSHEM PhylomeDB:Q8GY61
ProtClustDB:CLSN2915063 Genevestigator:Q8GY61 Uniprot:Q8GY61
Length = 335
Score = 183 (69.5 bits), Expect = 6.6e-12, P = 6.6e-12
Identities = 37/101 (36%), Positives = 66/101 (65%)
Query: 293 KRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRAL 352
K K ++ ++ + S D + + +K A+R +A + H+++ER RR++I+E+M+ L
Sbjct: 143 KHKAKKEENNF-SNDSSKVTKELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFL 201
Query: 353 QELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSMGCGVV 392
Q+L+P C+K + KA MLDE I Y++SLQ Q++ +SM +V
Sbjct: 202 QDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFLSMKLAIV 242
>TAIR|locus:2172209 [details] [associations]
symbol:AT5G62610 "AT5G62610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 EMBL:AB020751 HOGENOM:HOG000238007 EMBL:AY072104
EMBL:AY123023 EMBL:AY084578 EMBL:AF488611 IPI:IPI00518025
RefSeq:NP_201067.1 UniGene:At.24534 UniGene:At.24682
ProteinModelPortal:Q9LV17 SMR:Q9LV17 PaxDb:Q9LV17 PRIDE:Q9LV17
EnsemblPlants:AT5G62610.1 GeneID:836382 KEGG:ath:AT5G62610
GeneFarm:2935 TAIR:At5g62610 eggNOG:NOG269855 InParanoid:Q9LV17
OMA:DDSSKMV PhylomeDB:Q9LV17 ProtClustDB:CLSN2916786
Genevestigator:Q9LV17 Uniprot:Q9LV17
Length = 281
Score = 177 (67.4 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 37/69 (53%), Positives = 52/69 (75%)
Query: 325 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 383
A+R +A + H+L+ER RR++I+EKM ALQ++IP CNK KA +LDE I Y++SLQ QV+
Sbjct: 155 ARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVE 214
Query: 384 MMSMGCGVV 392
+SM VV
Sbjct: 215 FLSMKLEVV 223
>UNIPROTKB|Q2QMN2 [details] [associations]
symbol:LOC_Os12g40590 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 EMBL:CM000149 eggNOG:NOG272270
KEGG:dosa:Os12t0597800-01 Uniprot:Q2QMN2
Length = 265
Score = 168 (64.2 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 37/91 (40%), Positives = 57/91 (62%)
Query: 297 RETDDEYHSEDVELE-SADAKKQSRGSTSAKRSRA-AEVHNLSERRRRDRINEKMRALQE 354
++ D E +E ++ + +++ R A+R+ AE H L+E+RRR RINEK + LQ
Sbjct: 118 KKPDGEPLTEKMDKKLPTRTEERRRVKHKARRNPGYAETHGLTEKRRRSRINEKFKMLQR 177
Query: 355 LIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 385
L+P C+K ++S LD I Y+KSLQ Q+Q M
Sbjct: 178 LVPGCDKCSQSSTLDRTIHYMKSLQQQLQAM 208
Score = 41 (19.5 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 7/8 (87%), Positives = 8/8 (100%)
Query: 90 EDEMASWL 97
EDEMA+WL
Sbjct: 84 EDEMAAWL 91
>UNIPROTKB|Q84LH4 [details] [associations]
symbol:OSJNBb0011H13.2 "Putative Helix-loop-helix
DNA-binding domain containing protein" species:39947 "Oryza sativa
Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000009 EMBL:AP008209
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140 EMBL:AC120983
EMBL:AC135956 RefSeq:NP_001051150.1 UniGene:Os.24540
EnsemblPlants:LOC_Os03g51910.1 GeneID:4333984 KEGG:osa:4333984
eggNOG:NOG262475 OMA:SKQMMLS ProtClustDB:CLSN2694257 Uniprot:Q84LH4
Length = 327
Score = 179 (68.1 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 43/125 (34%), Positives = 71/125 (56%)
Query: 285 QKPAAEDRKRKGRETDDEYHSEDVELES----ADAKKQSRGSTSAKRSRAAEVHNLSERR 340
Q + ++R E D++ ++ + D K+ AKR +A H+L+ER
Sbjct: 105 QTEVSSQQERISMEEDNQKSCSKMQSKEDSSDGDGTKEDYVHVRAKRGQATNSHSLAERL 164
Query: 341 RRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSMGCGVV-PMMFPG 398
RR +I+E+M+ LQ+L+P C+K + KA MLDE I Y++SLQ QV+ +SM V P +
Sbjct: 165 RRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPELSFD 224
Query: 399 VQQYM 403
++Q +
Sbjct: 225 IEQIL 229
>TAIR|locus:2152551 [details] [associations]
symbol:AT5G48560 "AT5G48560" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB015468 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 eggNOG:NOG283912
ProtClustDB:CLSN2684837 EMBL:AF488610 EMBL:BT002945 EMBL:BT005637
IPI:IPI00543091 RefSeq:NP_199667.1 UniGene:At.43769
ProteinModelPortal:Q9FJL4 SMR:Q9FJL4 IntAct:Q9FJL4 PaxDb:Q9FJL4
PRIDE:Q9FJL4 EnsemblPlants:AT5G48560.1 GeneID:834912
KEGG:ath:AT5G48560 TAIR:At5g48560 InParanoid:Q9FJL4 OMA:SASCYAT
PhylomeDB:Q9FJL4 Genevestigator:Q9FJL4 Uniprot:Q9FJL4
Length = 498
Score = 182 (69.1 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 42/101 (41%), Positives = 62/101 (61%)
Query: 293 KRKGRETDDEYHSEDVELESADAKKQSRGSTS-----AKRSRAAEVHNLSERRRRDRINE 347
KR+ E DDE + E ++ K A+R +A + H+L+ER RR++I E
Sbjct: 266 KRRREEEDDEEEEGEGEGNKSNNTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKIGE 325
Query: 348 KMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSM 387
+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+ +SM
Sbjct: 326 RMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 366
>UNIPROTKB|Q6ZCV8 [details] [associations]
symbol:P0028A08.20 "Os08g0487700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000145 EMBL:AP004557 RefSeq:NP_001062102.1 UniGene:Os.60678
EnsemblPlants:LOC_Os08g38080.1 GeneID:4345892 KEGG:osa:4345892
eggNOG:NOG275480 Uniprot:Q6ZCV8
Length = 365
Score = 179 (68.1 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 35/83 (42%), Positives = 58/83 (69%)
Query: 311 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLD 369
++ +A+K+ A++ +A H+L+ER RR++I+E+M+ LQ+L+P C+K + KA MLD
Sbjct: 164 DAGEAQKEGYSHVRARKGQATNNHSLAERLRREKISERMKLLQDLVPGCSKVTGKALMLD 223
Query: 370 EAIEYLKSLQLQVQMMSMGCGVV 392
E I Y++SLQ QV+ +SM V
Sbjct: 224 EIINYVQSLQRQVEFLSMKLSAV 246
>TAIR|locus:2014144 [details] [associations]
symbol:BEE1 "BR enhanced expression 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC013354
EMBL:AY138253 EMBL:AF488579 EMBL:AK117269 EMBL:BT005268
IPI:IPI00539846 RefSeq:NP_173276.2 UniGene:At.46141
ProteinModelPortal:Q8GZ13 SMR:Q8GZ13 IntAct:Q8GZ13
EnsemblPlants:AT1G18400.1 GeneID:838421 KEGG:ath:AT1G18400
TAIR:At1g18400 eggNOG:euNOG17991 HOGENOM:HOG000090950
InParanoid:Q8GZ13 PhylomeDB:Q8GZ13 ProtClustDB:CLSN2680013
Genevestigator:Q8GZ13 Uniprot:Q8GZ13
Length = 260
Score = 172 (65.6 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 35/78 (44%), Positives = 54/78 (69%)
Query: 311 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLD 369
E D K++ A+R +A + H+L+ER RR +INE++R LQ+++P C K+ A+MLD
Sbjct: 133 EEEDEKEREVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLD 192
Query: 370 EAIEYLKSLQLQVQMMSM 387
E I Y++SLQ QV+ +SM
Sbjct: 193 EIINYVQSLQNQVEFLSM 210
>UNIPROTKB|Q69JJ6 [details] [associations]
symbol:OSJNBa0026C08.22 "TA1 protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008215
ProtClustDB:CLSN2697804 EMBL:AP006169 EMBL:HQ858863 EMBL:AK121418
RefSeq:NP_001063455.1 UniGene:Os.38400
EnsemblPlants:LOC_Os09g29830.3 GeneID:4347355 KEGG:osa:4347355
Uniprot:Q69JJ6
Length = 428
Score = 180 (68.4 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 36/83 (43%), Positives = 59/83 (71%)
Query: 311 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLD 369
E+++++K+ A+R +A H+L+ER RR++I+E+M+ LQ+L+P C+K + KA MLD
Sbjct: 236 ETSESQKEEYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLD 295
Query: 370 EAIEYLKSLQLQVQMMSMGCGVV 392
E I Y++SLQ QV+ +SM V
Sbjct: 296 EIINYVQSLQRQVEFLSMKLATV 318
Score = 37 (18.1 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 201 STVVDSSDTPAPGPDSRASEAMRSMEGASGVNNNN 235
S+ V D + G DS+ + G V+++N
Sbjct: 166 SSEVAGGDCSSKGSDSKKRRRPNEVMGTDQVHSSN 200
>UNIPROTKB|Q2QMV9 [details] [associations]
symbol:LOC_Os12g39850 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011 EMBL:CM000149
KEGG:dosa:Os12t0589000-00 OMA:DESEMMA Uniprot:Q2QMV9
Length = 304
Score = 174 (66.3 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 34/76 (44%), Positives = 53/76 (69%)
Query: 311 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDE 370
E ADA S+G + A R A + +L R+RR+RINE+++ LQ L+P K D ++ML+E
Sbjct: 204 EVADAGATSKGKSRAGRGAATDPQSLYARKRRERINERLKTLQNLVPNGTKVDISTMLEE 263
Query: 371 AIEYLKSLQLQVQMMS 386
A+ Y+K LQLQ++++S
Sbjct: 264 AVHYVKFLQLQIKLLS 279
>UNIPROTKB|Q6EPZ6 [details] [associations]
symbol:P0014G10.34 "BHLH transcription factor PTF1-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 HOGENOM:HOG000239571 EMBL:AP005784
RefSeq:NP_001175840.1 UniGene:Os.59658
EnsemblPlants:LOC_Os09g25040.1 GeneID:9272478 KEGG:osa:9272478
OMA:SMSVLTA Uniprot:Q6EPZ6
Length = 499
Score = 179 (68.1 bits), Expect = 5.5e-11, P = 5.5e-11
Identities = 37/67 (55%), Positives = 51/67 (76%)
Query: 320 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK---SDKASMLDEAIEYLK 376
R A+R +A + H+++ER RR+RI E+M+ALQEL+P NK +DKASMLDE I+Y+K
Sbjct: 247 RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDYVK 306
Query: 377 SLQLQVQ 383
LQLQV+
Sbjct: 307 FLQLQVK 313
>UNIPROTKB|Q84QW1 [details] [associations]
symbol:OJ1191_A10.109 "BHLH transcription
factor(GBOF-1)-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:AP008214
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003888
RefSeq:NP_001062289.1 UniGene:Os.10830
EnsemblPlants:LOC_Os08g41320.1 GeneID:4346087 KEGG:osa:4346087
eggNOG:NOG320619 OMA:ERISQRM ProtClustDB:CLSN2697487 Uniprot:Q84QW1
Length = 405
Score = 177 (67.4 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 37/74 (50%), Positives = 54/74 (72%)
Query: 325 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 383
A+R +A + H+L+ER RR+RI+++M+ LQ+L+P CNK KA MLDE I Y++SLQ QV+
Sbjct: 206 ARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVE 265
Query: 384 MMSMGCGVV-PMMF 396
+SM V P+ F
Sbjct: 266 FLSMKLATVNPLDF 279
>TAIR|locus:2199307 [details] [associations]
symbol:AT1G68240 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009686 "gibberellin biosynthetic process" evidence=RCA]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA] [GO:0016114 "terpenoid biosynthetic process"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC016447
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AJ577585 EMBL:AY735551
EMBL:AY735552 EMBL:AY924719 IPI:IPI00528459 IPI:IPI00657054
IPI:IPI00919318 PIR:H96705 RefSeq:NP_001031251.1 RefSeq:NP_176991.2
UniGene:At.35550 ProteinModelPortal:Q5XVH0 SMR:Q5XVH0
EnsemblPlants:AT1G68240.1 GeneID:843153 KEGG:ath:AT1G68240
TAIR:At1g68240 eggNOG:NOG270610 HOGENOM:HOG000095221 OMA:EGTHEEE
PhylomeDB:Q5XVH0 ProtClustDB:CLSN2681409 Genevestigator:Q5XVH0
Uniprot:Q5XVH0
Length = 185
Score = 155 (59.6 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 35/88 (39%), Positives = 48/88 (54%)
Query: 311 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPR-CNKSDKASMLD 369
E D + AKR R+ E + E++RR I +K+ LQ L+P C K D AS L+
Sbjct: 49 EKHDEEPDEESYRMAKRQRSMEYRMMMEKKRRKEIKDKVDILQGLMPNHCTKPDLASKLE 108
Query: 370 EAIEYLKSLQLQVQMMSMGCGVVPMMFP 397
IEY+KSL+ QV +MSM P+ P
Sbjct: 109 NIIEYIKSLKYQVDVMSMAYTTTPVYTP 136
>TAIR|locus:2095198 [details] [associations]
symbol:AT3G23690 "AT3G23690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
EMBL:AP000377 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 EMBL:AY065441 EMBL:AY096536
EMBL:EU550216 EMBL:EU550217 EMBL:EU550218 EMBL:EU550219
EMBL:EU550220 EMBL:EU550221 EMBL:EU550222 EMBL:EU550223
EMBL:EU550224 EMBL:EU550225 EMBL:EU550226 EMBL:EU550227
EMBL:EU550228 EMBL:EU550229 EMBL:EU550230 EMBL:EU550231
EMBL:EU550232 EMBL:EU550233 EMBL:EU550234 EMBL:EU550235
EMBL:EU550236 EMBL:EU550237 EMBL:EU550238 EMBL:EU550239
EMBL:AF488609 IPI:IPI00545445 RefSeq:NP_189011.2 UniGene:At.6666
ProteinModelPortal:Q9LK48 SMR:Q9LK48 PaxDb:Q9LK48 PRIDE:Q9LK48
EnsemblPlants:AT3G23690.1 GeneID:821950 KEGG:ath:AT3G23690
TAIR:At3g23690 eggNOG:NOG292697 InParanoid:Q9LK48 OMA:MEFNANA
PhylomeDB:Q9LK48 ProtClustDB:CLSN2917952 Genevestigator:Q9LK48
Uniprot:Q9LK48
Length = 371
Score = 174 (66.3 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 36/73 (49%), Positives = 53/73 (72%)
Query: 325 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 383
A+R +A + H+L+ER RR++I+E+M LQ+L+P CN+ + KA MLDE I Y++SLQ QV+
Sbjct: 193 ARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVE 252
Query: 384 MMSMGCGVV-PMM 395
+SM V P M
Sbjct: 253 FLSMKLATVNPRM 265
>TAIR|locus:2079676 [details] [associations]
symbol:AT3G07340 "AT3G07340" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC009853 EMBL:AK175369 EMBL:AK175496
EMBL:AK176563 EMBL:AK176663 EMBL:BT026497 EMBL:AF488595
IPI:IPI00521004 RefSeq:NP_187390.1 UniGene:At.40357
ProteinModelPortal:Q9SRT2 SMR:Q9SRT2 EnsemblPlants:AT3G07340.1
GeneID:819922 KEGG:ath:AT3G07340 GeneFarm:2908 TAIR:At3g07340
eggNOG:NOG283912 InParanoid:Q9SRT2 OMA:MENELFM PhylomeDB:Q9SRT2
ProtClustDB:CLSN2684837 Genevestigator:Q9SRT2 Uniprot:Q9SRT2
Length = 456
Score = 175 (66.7 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 34/64 (53%), Positives = 51/64 (79%)
Query: 325 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 383
A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 260 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 319
Query: 384 MMSM 387
+SM
Sbjct: 320 FLSM 323
>UNIPROTKB|Q5VR96 [details] [associations]
symbol:P0038C05.31-1 "Os06g0275600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008212 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003044 RefSeq:NP_001057380.1 UniGene:Os.32526
EnsemblPlants:LOC_Os06g16400.1 EnsemblPlants:LOC_Os06g16400.2
GeneID:4340749 KEGG:osa:4340749 ProtClustDB:CLSN2697804
Uniprot:Q5VR96
Length = 437
Score = 172 (65.6 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 35/78 (44%), Positives = 56/78 (71%)
Query: 311 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLD 369
++A + K+ A+R +A H+L+ER RR++I+E+M+ LQ+L+P C+K + KA MLD
Sbjct: 248 DNAGSPKEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLD 307
Query: 370 EAIEYLKSLQLQVQMMSM 387
E I Y++SLQ QV+ +SM
Sbjct: 308 EIINYVQSLQRQVEFLSM 325
>TAIR|locus:2053766 [details] [associations]
symbol:AT2G42300 "AT2G42300" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005956 EMBL:AY065411 EMBL:AY096521 EMBL:AK175584
EMBL:AK176019 EMBL:AK176634 EMBL:AF488583 IPI:IPI00532521
PIR:C84852 RefSeq:NP_850368.1 UniGene:At.28495
ProteinModelPortal:Q8VZ02 SMR:Q8VZ02 EnsemblPlants:AT2G42300.1
GeneID:818831 KEGG:ath:AT2G42300 TAIR:At2g42300 eggNOG:NOG301522
HOGENOM:HOG000037005 InParanoid:Q8VZ02 OMA:PEWGREE PhylomeDB:Q8VZ02
ProtClustDB:CLSN2680198 Genevestigator:Q8VZ02 Uniprot:Q8VZ02
Length = 327
Score = 169 (64.5 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 41/109 (37%), Positives = 63/109 (57%)
Query: 285 QKPAAEDRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDR 344
Q + KRK RE + S S ++ K A+R +A + H+L+ER RR++
Sbjct: 148 QNQSYSSGKRKEREKKVK-SSTKKNKSSVESDKLPYVHVRARRGQATDNHSLAERARREK 206
Query: 345 INEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSMGCGVV 392
IN +M+ LQEL+P C+K A +LDE I ++++LQ QV+M+SM V
Sbjct: 207 INARMKLLQELVPGCDKIQGTALVLDEIINHVQTLQRQVEMLSMRLAAV 255
>TAIR|locus:2118934 [details] [associations]
symbol:RSL2 "AT4G33880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0048766 "root hair initiation"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009733 GO:GO:0003677 GO:GO:0016049 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL031032
EMBL:AL161584 HOGENOM:HOG000240244 GO:GO:0048766 EMBL:AF488616
EMBL:BT003137 EMBL:AK228110 IPI:IPI00526320 PIR:T05216
RefSeq:NP_195114.2 UniGene:At.31542 ProteinModelPortal:Q84WK0
SMR:Q84WK0 EnsemblPlants:AT4G33880.1 GeneID:829531
KEGG:ath:AT4G33880 TAIR:At4g33880 eggNOG:NOG318365
InParanoid:Q84WK0 OMA:TINTNSY PhylomeDB:Q84WK0
ProtClustDB:CLSN2680247 Genevestigator:Q84WK0 Uniprot:Q84WK0
Length = 352
Score = 169 (64.5 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 36/89 (40%), Positives = 54/89 (60%)
Query: 300 DDEYHSEDVELESADAKK--QSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIP 357
D + ED + D K G T A R A + +L R+RR+RINE++R LQ L+P
Sbjct: 241 DQDGGGEDSSSKEDDPSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQNLVP 300
Query: 358 RCNKSDKASMLDEAIEYLKSLQLQVQMMS 386
K D ++ML+EA+ Y+K LQLQ++++S
Sbjct: 301 NGTKVDISTMLEEAVHYVKFLQLQIKLLS 329
>UNIPROTKB|Q5N802 [details] [associations]
symbol:P0004D12.24 "BHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008207 eggNOG:NOG283912 EMBL:AP003433 EMBL:HQ858864
EMBL:AK101063 RefSeq:NP_001045188.1 UniGene:Os.5763
EnsemblPlants:LOC_Os01g68700.2 GeneID:4324327 KEGG:osa:4324327
ProtClustDB:CLSN2692207 Uniprot:Q5N802
Length = 481
Score = 169 (64.5 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 34/69 (49%), Positives = 50/69 (72%)
Query: 325 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 383
A+R A + H+L+ER RR++I+++M+ LQ+L+P CNK KA MLDE I Y++SLQ QV+
Sbjct: 279 ARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVE 338
Query: 384 MMSMGCGVV 392
+SM V
Sbjct: 339 FLSMKLATV 347
>UNIPROTKB|Q2QQ32 [details] [associations]
symbol:LOC_Os12g32400 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011 EMBL:CM000149
eggNOG:NOG284967 Uniprot:Q2QQ32
Length = 198
Score = 146 (56.5 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 34/91 (37%), Positives = 56/91 (61%)
Query: 297 RETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEV-HNLSERRRRDRINEKMRALQEL 355
R+ + +E + S + + + S + K S +AE + + RR RINE++R LQEL
Sbjct: 81 RKVQMDTENELMTNRSKEVRTKMSVSKACKHSVSAESSQSYYAKNRRQRINERLRILQEL 140
Query: 356 IPRCNKSDKASMLDEAIEYLKSLQLQVQMMS 386
IP K D ++ML+EAI+Y+K L LQ++++S
Sbjct: 141 IPNGTKVDISTMLEEAIQYVKFLHLQIKLLS 171
>UNIPROTKB|Q6K8Y4 [details] [associations]
symbol:OJ1695_H09.18 "Basic helix-loop-helix (BHLH)-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000239571 EMBL:AP003975 EMBL:AP004094
EnsemblPlants:LOC_Os02g55250.1 OMA:GQDDFFD Uniprot:Q6K8Y4
Length = 463
Score = 167 (63.8 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 32/47 (68%), Positives = 42/47 (89%)
Query: 341 RRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM 387
RR+RI E+M+ALQEL+P NK+DKASMLDE I+Y+K LQLQV+++SM
Sbjct: 252 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSM 298
Score = 38 (18.4 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 6/15 (40%), Positives = 12/15 (80%)
Query: 325 AKRSRAAEVHNLSER 339
A+R +A + H+++ER
Sbjct: 214 ARRGQATDPHSIAER 228
>TAIR|locus:2199221 [details] [associations]
symbol:RSL4 "AT1G27740" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0048766 "root hair
initiation" evidence=IMP] [GO:0048765 "root hair cell
differentiation" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0009733
GO:GO:0003677 GO:GO:0016049 GO:GO:0003700 GO:GO:0006351
EMBL:AC012375 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AY085436
IPI:IPI00523669 PIR:B86402 RefSeq:NP_564293.1 UniGene:At.41015
ProteinModelPortal:Q8LEG1 SMR:Q8LEG1 EnsemblPlants:AT1G27740.1
GeneID:839667 KEGG:ath:AT1G27740 TAIR:At1g27740 eggNOG:NOG244031
HOGENOM:HOG000240244 InParanoid:Q8LEG1 OMA:DESNTNW PhylomeDB:Q8LEG1
ProtClustDB:CLSN2688032 Genevestigator:Q8LEG1 GO:GO:0048766
Uniprot:Q8LEG1
Length = 258
Score = 159 (61.0 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 32/79 (40%), Positives = 54/79 (68%)
Query: 312 SADAKKQS----RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASM 367
S+D +K S +G T A + A + +L R+RR++INE+++ LQ L+P K D ++M
Sbjct: 152 SSDDEKASVTSVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTM 211
Query: 368 LDEAIEYLKSLQLQVQMMS 386
L+EA+ Y+K LQLQ++++S
Sbjct: 212 LEEAVHYVKFLQLQIKLLS 230
>TAIR|locus:2027809 [details] [associations]
symbol:BEE3 "AT1G73830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000090950 ProtClustDB:CLSN2680013 EMBL:AF488585
EMBL:AC012679 EMBL:AK118781 EMBL:BT006055 IPI:IPI00541876
RefSeq:NP_177524.2 UniGene:At.34949 ProteinModelPortal:Q8GWK7
SMR:Q8GWK7 EnsemblPlants:AT1G73830.1 GeneID:843719
KEGG:ath:AT1G73830 TAIR:At1g73830 eggNOG:NOG264296
InParanoid:Q8GWK7 OMA:LENNFHQ PhylomeDB:Q8GWK7
Genevestigator:Q8GWK7 Uniprot:Q8GWK7
Length = 261
Score = 159 (61.0 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 30/64 (46%), Positives = 49/64 (76%)
Query: 325 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 383
A+R +A + H+++ER RR +INE+++ LQ+++P C K+ A+MLDE I Y++SLQ QV+
Sbjct: 149 ARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVE 208
Query: 384 MMSM 387
+SM
Sbjct: 209 FLSM 212
>UNIPROTKB|Q2QML8 [details] [associations]
symbol:LOC_Os12g40730 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 KEGG:dosa:Os12t0599400-00
KEGG:dosa:Os12t0599550-00 Gramene:Q2QML8 HOGENOM:HOG000244163
Uniprot:Q2QML8
Length = 387
Score = 157 (60.3 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 45/120 (37%), Positives = 68/120 (56%)
Query: 295 KGRETDDEYHSEDVELESADAK-KQS--RGSTSAK--RSRAAEVHNLSER--RRRDRINE 347
K +DD + + SA K KQ+ RG S++ R + L + RRR +I E
Sbjct: 173 KDETSDDSGERKKKKASSAAGKSKQASPRGCRSSQPYRKSGDSIDELFTKFHRRRFKITE 232
Query: 348 KMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVP-MMFPGV---QQYM 403
+ R LQ L+P C+KS++AS LD+ I+Y+KSLQ Q++ MS+ G P +++P Q YM
Sbjct: 233 RFRTLQRLVPGCDKSNQASTLDQTIQYMKSLQHQLKAMSV-VGSPPALLYPAAVHPQSYM 291
Score = 46 (21.3 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 31 AEEDVMELLWQNG 43
+ ED+ EL+WQ G
Sbjct: 49 SSEDLFELMWQGG 61
>TAIR|locus:504954900 [details] [associations]
symbol:AT5G43175 "AT5G43175" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB008267 HOGENOM:HOG000240244 ProtClustDB:CLSN2688032
IPI:IPI00519888 RefSeq:NP_680385.1 UniGene:At.55333
ProteinModelPortal:Q3E7L7 SMR:Q3E7L7 EnsemblPlants:AT5G43175.1
GeneID:834335 KEGG:ath:AT5G43175 TAIR:At5g43175 eggNOG:NOG323547
InParanoid:Q3E7L7 OMA:MENEAFV PhylomeDB:Q3E7L7
Genevestigator:Q3E7L7 Uniprot:Q3E7L7
Length = 223
Score = 153 (58.9 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 36/97 (37%), Positives = 59/97 (60%)
Query: 294 RKGRETDDEYHSEDVE----LESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKM 349
R G+ Y+S D E L S +K R A R A++ +L R+RR+RIN+++
Sbjct: 101 RDGQSLSS-YNSSDDEKALGLVSNTSKSLKR-KAKANRGIASDPQSLYARKRRERINDRL 158
Query: 350 RALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMS 386
+ LQ L+P K D ++ML++A+ Y+K LQLQ++++S
Sbjct: 159 KTLQSLVPNGTKVDISTMLEDAVHYVKFLQLQIKLLS 195
>UNIPROTKB|Q2R0R9 [details] [associations]
symbol:LOC_Os11g41640 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240244 KEGG:dosa:Os11t0634700-00 Gramene:Q2R0R9
OMA:SLYAKRR Uniprot:Q2R0R9
Length = 246
Score = 156 (60.0 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 31/70 (44%), Positives = 51/70 (72%)
Query: 317 KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLK 376
KQS S K+ + + +L +RRR+RINE++R LQ+L+P K D ++ML+EA++Y+K
Sbjct: 150 KQSDNSRGHKQC-SKDTQSLYAKRRRERINERLRILQQLVPNGTKVDISTMLEEAVQYVK 208
Query: 377 SLQLQVQMMS 386
LQLQ++++S
Sbjct: 209 FLQLQIKLLS 218
>TAIR|locus:2144791 [details] [associations]
symbol:HEC3 "AT5G09750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB020752
EMBL:AL353994 GO:GO:0048462 GO:GO:0010500 IPI:IPI00522404
PIR:T49923 RefSeq:NP_196537.1 UniGene:At.65500
ProteinModelPortal:Q9LXD8 SMR:Q9LXD8 IntAct:Q9LXD8 STRING:Q9LXD8
EnsemblPlants:AT5G09750.1 GeneID:830835 KEGG:ath:AT5G09750
TAIR:At5g09750 eggNOG:NOG238444 HOGENOM:HOG000210013
InParanoid:Q9LXD8 OMA:NDPIGMA ProtClustDB:CLSN2916890
Genevestigator:Q9LXD8 Uniprot:Q9LXD8
Length = 224
Score = 150 (57.9 bits), Expect = 7.3e-09, P = 7.3e-09
Identities = 32/88 (36%), Positives = 54/88 (61%)
Query: 306 EDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKA 365
+ V+++ A KK R + + + +++ R RR+RI+E++R LQ L+P K D A
Sbjct: 106 QSVDIDPATVKKPKRRNVRI----SDDPQSVAARHRRERISERIRILQRLVPGGTKMDTA 161
Query: 366 SMLDEAIEYLKSLQLQVQMMSMGCGVVP 393
SMLDEAI Y+K L+ Q+++++ G P
Sbjct: 162 SMLDEAIRYVKFLKRQIRLLNNNTGYTP 189
>UNIPROTKB|Q8W5G3 [details] [associations]
symbol:OSJNBa0002J24.23 "Helix-loop-helix DNA-binding
domain containing protein, expressed" species:39947 "Oryza sativa
Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000009 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:CM000140 HOGENOM:HOG000240244 EMBL:AC090713
EnsemblPlants:LOC_Os03g55550.1 eggNOG:NOG237829 OMA:WIWERRR
Uniprot:Q8W5G3
Length = 310
Score = 155 (59.6 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 34/96 (35%), Positives = 55/96 (57%)
Query: 290 EDRKRKGRETDDEYHSEDVELESAD-AKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEK 348
++ + G +D+E + V D G A+R A +L RRRR+RIN +
Sbjct: 176 QESMQSGSCSDNESNCSQVNRRKVDRVAGGGNGKVPARRRSATIAQSLYARRRRERINGR 235
Query: 349 MRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 384
+R LQ+L+P K D ++ML+EA+ Y+K LQLQ+++
Sbjct: 236 LRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKV 271
>UNIPROTKB|Q8S490 [details] [associations]
symbol:rau1 "Transcription factor RAU1" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF465824
ProteinModelPortal:Q8S490 Gramene:Q8S490 Genevestigator:Q8S490
Uniprot:Q8S490
Length = 150
Score = 136 (52.9 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 29/60 (48%), Positives = 43/60 (71%)
Query: 325 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 383
AKR A +++ER RR RI+E++R LQEL+P +K ++ A MLD A++Y+K LQ QV+
Sbjct: 71 AKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQVK 130
>UNIPROTKB|Q6AV35 [details] [associations]
symbol:OSJNBa0063J18.7 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140
EMBL:AC107206 RefSeq:NP_001050667.1 UniGene:Os.79759
EnsemblPlants:LOC_Os03g42100.1 GeneID:4333457 KEGG:osa:4333457
eggNOG:NOG300710 OMA:CTSENDS ProtClustDB:CLSN2694086 Uniprot:Q6AV35
Length = 310
Score = 153 (58.9 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 33/76 (43%), Positives = 52/76 (68%)
Query: 311 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDE 370
ES A K + + S RS A + +L R+RR+RINE+++ LQ L+P K D ++ML+E
Sbjct: 210 ESPVAAKSNGKAQSGHRS-ATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEE 268
Query: 371 AIEYLKSLQLQVQMMS 386
A+ Y+K LQLQ++++S
Sbjct: 269 AMHYVKFLQLQIKLLS 284
>TAIR|locus:2008693 [details] [associations]
symbol:FBH1 "AT1G35460" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AF488612 EMBL:AC023064 EMBL:AF411791 EMBL:AY093794
IPI:IPI00538359 PIR:F86475 RefSeq:NP_174776.1 UniGene:At.18017
ProteinModelPortal:Q9C8P8 SMR:Q9C8P8 PRIDE:Q9C8P8
EnsemblPlants:AT1G35460.1 GeneID:840438 KEGG:ath:AT1G35460
TAIR:At1g35460 eggNOG:NOG263612 HOGENOM:HOG000095218
InParanoid:Q9C8P8 OMA:NLCLTEL PhylomeDB:Q9C8P8
ProtClustDB:CLSN2679906 Genevestigator:Q9C8P8 Uniprot:Q9C8P8
Length = 259
Score = 144 (55.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 29/63 (46%), Positives = 47/63 (74%)
Query: 325 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 383
AKR A +++ER RR RI++++R LQEL+P +K ++ A ML+EA+EY+K+LQ Q+Q
Sbjct: 183 AKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQIQ 242
Query: 384 MMS 386
++
Sbjct: 243 ELT 245
>UNIPROTKB|Q2QMM8 [details] [associations]
symbol:LOC_Os12g40630 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011 Gramene:Q2QMM8
eggNOG:NOG272270 Uniprot:Q2QMM8
Length = 249
Score = 143 (55.4 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 30/67 (44%), Positives = 45/67 (67%)
Query: 340 RRRDRINEKMRALQELIPRCNKSD-KASMLDEAIEYLKSLQLQVQMMSMGCGVVPMMFPG 398
+RR +INE ++ LQ+L+P C+KS+ +AS LD+ I Y+KSLQ Q MS+GC + G
Sbjct: 107 KRRCKINENLKTLQQLVPVCDKSNNQASTLDKTIRYMKSLQQHAQAMSVGCSMKTAEAAG 166
Query: 399 VQ-QYMP 404
V ++P
Sbjct: 167 VTCPFLP 173
>UNIPROTKB|Q6ZFY4 [details] [associations]
symbol:OJ1311_H06.19 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003983
EMBL:AP004161 Uniprot:Q6ZFY4
Length = 298
Score = 144 (55.7 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 34/96 (35%), Positives = 59/96 (61%)
Query: 297 RETDDEYHSEDVELESADAKKQSRGSTSAKRSRAA------EVHNLSERRRRDRINEKMR 350
R + H+E + S +KKQ A ++++A + +L+ + RR+RI+E++R
Sbjct: 166 RGSQKRAHAESSQAMSP-SKKQCGAGRKAGKAKSAPTTPTKDPQSLAAKNRRERISERLR 224
Query: 351 ALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMS 386
LQEL+P K D +ML++AI Y+K LQLQV++++
Sbjct: 225 ILQELVPNGTKVDLVTMLEKAISYVKFLQLQVKVLA 260
>TAIR|locus:2141573 [details] [associations]
symbol:FBH2 "AT4G09180" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL161514 HOGENOM:HOG000095218 ProtClustDB:CLSN2679906
EMBL:AF488613 EMBL:BT010423 EMBL:AK230384 IPI:IPI00545642
PIR:B85093 RefSeq:NP_192657.1 UniGene:At.33710
ProteinModelPortal:Q9M0R0 SMR:Q9M0R0 PaxDb:Q9M0R0 PRIDE:Q9M0R0
EnsemblPlants:AT4G09180.1 GeneID:826499 KEGG:ath:AT4G09180
TAIR:At4g09180 eggNOG:NOG277140 InParanoid:Q9M0R0 OMA:MENLMED
PhylomeDB:Q9M0R0 Genevestigator:Q9M0R0 Uniprot:Q9M0R0
Length = 262
Score = 141 (54.7 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 29/63 (46%), Positives = 46/63 (73%)
Query: 325 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 383
AKR A +++ER RR RI++++R LQEL+P +K ++ A ML+EA+EY+K LQ Q+Q
Sbjct: 186 AKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQIQ 245
Query: 384 MMS 386
++
Sbjct: 246 ELT 248
>TAIR|locus:2046198 [details] [associations]
symbol:FRU "AT2G28160" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010039 "response to iron ion" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0034756 "regulation of iron ion
transport" evidence=IMP] [GO:0071281 "cellular response to iron
ion" evidence=IEP] [GO:0071369 "cellular response to ethylene
stimulus" evidence=IEP] [GO:0071732 "cellular response to nitric
oxide" evidence=IEP] [GO:0000041 "transition metal ion transport"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0071281 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC005851 GO:GO:0071732 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0071369 EMBL:AF488570 EMBL:BT026446 IPI:IPI00547189
PIR:E84681 RefSeq:NP_850114.1 UniGene:At.43510
ProteinModelPortal:Q0V7X4 SMR:Q0V7X4 IntAct:Q0V7X4 STRING:Q0V7X4
PaxDb:Q0V7X4 PRIDE:Q0V7X4 EnsemblPlants:AT2G28160.1 GeneID:817362
KEGG:ath:AT2G28160 TAIR:At2g28160 eggNOG:NOG236355
HOGENOM:HOG000006047 InParanoid:Q0V7X4 OMA:NLKLWIT PhylomeDB:Q0V7X4
ProtClustDB:CLSN2690963 Genevestigator:Q0V7X4 GO:GO:0034756
Uniprot:Q0V7X4
Length = 318
Score = 143 (55.4 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 32/95 (33%), Positives = 52/95 (54%)
Query: 291 DRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMR 350
D R G E D+E +++ + + T RSR +SERRRR R+ +K+
Sbjct: 93 DSVRAGGEEDEEDYNDGDDSSATTTNNDGTRKTKTDRSRTL----ISERRRRGRMKDKLY 148
Query: 351 ALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 385
AL+ L+P K DKAS++ +A+ Y++ LQ Q + +
Sbjct: 149 ALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKL 183
>TAIR|locus:2126856 [details] [associations]
symbol:IND "AT4G00120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010197 "polar nucleus fusion" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161471
GO:GO:0010197 EMBL:AF069299 EMBL:BT029443 EMBL:AF488578
IPI:IPI00532644 PIR:T01340 RefSeq:NP_191923.1 UniGene:At.34598
ProteinModelPortal:O81313 SMR:O81313 IntAct:O81313 STRING:O81313
PRIDE:O81313 EnsemblPlants:AT4G00120.1 GeneID:827911
KEGG:ath:AT4G00120 TAIR:At4g00120 eggNOG:NOG274244
HOGENOM:HOG000113070 InParanoid:O81313 OMA:DWNKAND PhylomeDB:O81313
ProtClustDB:CLSN2916160 Genevestigator:O81313 Uniprot:O81313
Length = 198
Score = 134 (52.2 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 35/101 (34%), Positives = 55/101 (54%)
Query: 306 EDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKA 365
+ V+++ A K +R + + + + RRRR+RI+EK+R L+ ++P K D A
Sbjct: 99 QPVDIDPATVPKPNRRNVRI----SDDPQTVVARRRRERISEKIRILKRIVPGGAKMDTA 154
Query: 366 SMLDEAIEYLKSLQLQVQMMSMGCGV-VPMMFPGVQQYMPN 405
SMLDEAI Y K L+ QV+++ + PM P Y N
Sbjct: 155 SMLDEAIRYTKFLKRQVRILQPHSQIGAPMANPSYLCYYHN 195
>UNIPROTKB|E9PKF0 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9606 "Homo sapiens"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000060 "protein import
into nucleus, translocation" evidence=IEA] [GO:0000982 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0001190
"RNA polymerase II transcription factor binding transcription
factor activity involved in positive regulation of transcription"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0016604 "nuclear
body" evidence=IEA] [GO:0032922 "circadian regulation of gene
expression" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0043425 "bHLH transcription
factor binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] InterPro:IPR001067
InterPro:IPR011598 Pfam:PF00010 PRINTS:PR00785 PROSITE:PS50888
SMART:SM00353 GO:GO:0005737 GO:GO:0003677 GO:GO:0007623
GO:GO:0005667 GO:GO:0000060 GO:GO:0000982 GO:GO:0001190
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0042176 EMBL:AC016884
EMBL:AC022878 IPI:IPI00413132 HGNC:HGNC:701
ProteinModelPortal:E9PKF0 SMR:E9PKF0 Ensembl:ENST00000529388
ArrayExpress:E9PKF0 Bgee:E9PKF0 Uniprot:E9PKF0
Length = 135
Score = 123 (48.4 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 31/94 (32%), Positives = 53/94 (56%)
Query: 291 DRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSR-AAEVHNLSERRRRDRINEKM 349
+RKRKG TD + E ++ + D + + R + A E H+ E+RRRD++N +
Sbjct: 36 NRKRKGSSTD---YQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFI 92
Query: 350 RALQELIPRCN----KSDKASMLDEAIEYLKSLQ 379
L L+P CN K DK ++L A++++K+L+
Sbjct: 93 DELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
>UNIPROTKB|Q8S0N2 [details] [associations]
symbol:P0692C11.41-1 "BHLH transcription factor-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:CM000138 EMBL:AP003381 EMBL:AP003273 EMBL:AK106119
RefSeq:NP_001044022.1 UniGene:Os.25546 GeneID:4327679
KEGG:osa:4327679 eggNOG:NOG254276 OMA:EPDMEAM
ProtClustDB:CLSN2919059 Uniprot:Q8S0N2
Length = 393
Score = 142 (55.0 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 31/74 (41%), Positives = 48/74 (64%)
Query: 330 AAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM-SMG 388
+++ ++ R RR+R+++++R LQ+L+P NK D ASMLDEA YLK L+ QVQ + ++G
Sbjct: 282 SSDPQTVAARLRRERVSDRLRVLQKLVPGGNKMDTASMLDEAASYLKFLKSQVQKLETLG 341
Query: 389 CGVVPMMFPGVQQY 402
P QQY
Sbjct: 342 TTTTTSKLP--QQY 353
>UNIPROTKB|Q67TR8 [details] [associations]
symbol:B1342C04.6 "Basic helix-loop-helix (BHLH)-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 EMBL:AP005655 EMBL:AP006057
EMBL:AK060477 EMBL:AK070458 RefSeq:NP_001063357.1 UniGene:Os.51063
EnsemblPlants:LOC_Os09g28210.1 GeneID:4347252 KEGG:osa:4347252
OMA:AYPAFHA ProtClustDB:CLSN2697769 Uniprot:Q67TR8
Length = 236
Score = 131 (51.2 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 27/51 (52%), Positives = 38/51 (74%)
Query: 335 NLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 385
+++ R RR+RI+E++R LQ L+P K D ASMLDEAI Y+K L+ QVQ +
Sbjct: 153 SVAARLRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKSQVQSL 203
Score = 40 (19.1 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 207 SDTPAP--GPDSRASEAMRSM 225
SD+ AP S +SEAMR M
Sbjct: 100 SDSGAPQGSSSSSSSEAMREM 120
>TAIR|locus:2076581 [details] [associations]
symbol:AT3G57800 "AT3G57800" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL049660 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000037005 ProtClustDB:CLSN2680198
EMBL:AF488593 EMBL:AL132977 EMBL:AY139773 EMBL:BT003037
EMBL:AY085849 IPI:IPI00532305 IPI:IPI00535946 PIR:T46002
RefSeq:NP_567057.2 RefSeq:NP_850745.1 UniGene:At.34797
ProteinModelPortal:Q3EAI1 EnsemblPlants:AT3G57800.1 GeneID:825530
KEGG:ath:AT3G57800 TAIR:At3g57800 eggNOG:NOG254513
InParanoid:Q3EAI1 OMA:MVASANL PhylomeDB:Q3EAI1
Genevestigator:Q3EAI1 Uniprot:Q3EAI1
Length = 426
Score = 120 (47.3 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 25/80 (31%), Positives = 44/80 (55%)
Query: 285 QKPAAEDRKRKGRETDDEYHSEDVELESADAKKQSR---GSTSAKRSRAAEVHNLSERRR 341
Q P R G+ D E + ++ +++ + A+R +A + H+L+ER R
Sbjct: 163 QIPCPNQNNRNGKRKDFEKKGKSSTKKNKSSEENEKLPYVHVRARRGQATDSHSLAERAR 222
Query: 342 RDRINEKMRALQELIPRCNK 361
R++IN +M+ LQEL+P C+K
Sbjct: 223 REKINARMKLLQELVPGCDK 242
Score = 64 (27.6 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 365 ASMLDEAIEYLKSLQLQVQMMSMGCGVV 392
A +LDE I +++SLQ QV+M+SM V
Sbjct: 294 ALVLDEIINHVQSLQRQVEMLSMRLAAV 321
>UNIPROTKB|Q8QGQ7 [details] [associations]
symbol:ARNTL2 "Aryl hydrocarbon receptor nuclear
translocator-like protein 2" species:9031 "Gallus gallus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0048511 "rhythmic process" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005737 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0048511 GO:GO:0005667 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 HOGENOM:HOG000234379 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P27540 HOVERGEN:HBG107503 EMBL:AF246958
IPI:IPI00819869 RefSeq:NP_989464.1 UniGene:Gga.2818
ProteinModelPortal:Q8QGQ7 GeneID:373925 KEGG:gga:373925 CTD:56938
eggNOG:NOG288887 KO:K09099 NextBio:20813457 Uniprot:Q8QGQ7
Length = 622
Score = 143 (55.4 bits), Expect = 9.3e-07, P = 9.3e-07
Identities = 33/92 (35%), Positives = 57/92 (61%)
Query: 292 RKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRA 351
RKRKG ++D++ + VE++ D +K++ K E H+ +E+RRRD++N +
Sbjct: 59 RKRKGSDSDNQ---DTVEVDG-DPQKRNEDEEHLKIKDFREAHSQTEKRRRDKMNNLIEE 114
Query: 352 LQELIPRCN----KSDKASMLDEAIEYLKSLQ 379
L +IP+CN K DK ++L A+++LKSL+
Sbjct: 115 LSAMIPQCNPMARKLDKLTVLRMAVQHLKSLK 146
>UNIPROTKB|F1NQL8 [details] [associations]
symbol:ARNTL2 "Aryl hydrocarbon receptor nuclear
translocator-like protein 2" species:9031 "Gallus gallus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10
SUPFAM:SSF47459 IPI:IPI00819869 EMBL:AADN02006684
Ensembl:ENSGALT00000037361 ArrayExpress:F1NQL8 Uniprot:F1NQL8
Length = 623
Score = 143 (55.4 bits), Expect = 9.3e-07, P = 9.3e-07
Identities = 33/92 (35%), Positives = 57/92 (61%)
Query: 292 RKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRA 351
RKRKG ++D++ + VE++ D +K++ K E H+ +E+RRRD++N +
Sbjct: 59 RKRKGSDSDNQ---DTVEVDG-DPQKRNEDEEHLKIKDFREAHSQTEKRRRDKMNNLIEE 114
Query: 352 LQELIPRCN----KSDKASMLDEAIEYLKSLQ 379
L +IP+CN K DK ++L A+++LKSL+
Sbjct: 115 LSAMIPQCNPMARKLDKLTVLRMAVQHLKSLK 146
>UNIPROTKB|E1C1C5 [details] [associations]
symbol:ARNTL2 "Aryl hydrocarbon receptor nuclear
translocator-like protein 2" species:9031 "Gallus gallus"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000982 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0007623 GO:GO:0045944 GO:GO:0005667 GO:GO:0004871
GO:GO:0000982 SMART:SM00086 TIGRFAMs:TIGR00229
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
OMA:IPQCNPM EMBL:AADN02006684 IPI:IPI00598933
Ensembl:ENSGALT00000022820 ArrayExpress:E1C1C5 Uniprot:E1C1C5
Length = 624
Score = 143 (55.4 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 33/92 (35%), Positives = 57/92 (61%)
Query: 292 RKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRA 351
RKRKG ++D++ + VE++ D +K++ K E H+ +E+RRRD++N +
Sbjct: 59 RKRKGSDSDNQ---DTVEVDG-DPQKRNEDEEHLKIKDFREAHSQTEKRRRDKMNNLIEE 114
Query: 352 LQELIPRCN----KSDKASMLDEAIEYLKSLQ 379
L +IP+CN K DK ++L A+++LKSL+
Sbjct: 115 LSAMIPQCNPMARKLDKLTVLRMAVQHLKSLK 146
>UNIPROTKB|Q69TX2 [details] [associations]
symbol:P0021C04.13 "BHLH protein-like" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP004687
ProteinModelPortal:Q69TX2 EnsemblPlants:LOC_Os06g10820.1
Gramene:Q69TX2 HOGENOM:HOG000241748 Uniprot:Q69TX2
Length = 211
Score = 132 (51.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 31/85 (36%), Positives = 49/85 (57%)
Query: 314 DAKKQSRGSTSAKRSRAAEV----HNLSERRRRDRINEKMRALQELIPRCNKSDKASMLD 369
DA ++ + R R A V +++ R RR+R++++MRALQ L+P + D ASML+
Sbjct: 101 DAAEEEEAAAPRPRRRNARVSSEPQSVAARLRRERVSQRMRALQRLVPGGARLDTASMLE 160
Query: 370 EAIEYLKSLQLQVQMMSMGCGVVPM 394
EAI Y+K L+ VQ + + M
Sbjct: 161 EAIRYVKFLKGHVQSLERAAAALHM 185
>UNIPROTKB|Q6Z9R3 [details] [associations]
symbol:P0461F06.33 "BHLH protein family-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000145
eggNOG:NOG315110 EMBL:AP004693 EnsemblPlants:LOC_Os08g36740.1
OMA:SAMREMI Uniprot:Q6Z9R3
Length = 246
Score = 134 (52.2 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 27/56 (48%), Positives = 40/56 (71%)
Query: 330 AAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 385
+ + +++ R RR+RI+E++R LQ L+P K D ASMLDEAI Y+K L+ QVQ +
Sbjct: 158 STDPQSVAARMRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 213
>TAIR|locus:2074865 [details] [associations]
symbol:HEC2 "AT3G50330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] [GO:0080126 "ovary
septum development" evidence=IGI] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL132976
HOGENOM:HOG000242863 ProtClustDB:CLSN2684406 GO:GO:0048462
GO:GO:0010500 EMBL:BT010607 EMBL:AK175679 EMBL:AK175912
EMBL:AK176020 IPI:IPI00532987 PIR:T45579 RefSeq:NP_190602.1
UniGene:At.35505 ProteinModelPortal:Q9SND4 SMR:Q9SND4 IntAct:Q9SND4
EnsemblPlants:AT3G50330.1 GeneID:824195 KEGG:ath:AT3G50330
TAIR:At3g50330 eggNOG:NOG315110 InParanoid:Q9SND4 OMA:NANMAAM
PhylomeDB:Q9SND4 Genevestigator:Q9SND4 GO:GO:0080126 Uniprot:Q9SND4
Length = 231
Score = 133 (51.9 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 27/51 (52%), Positives = 38/51 (74%)
Query: 335 NLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 385
+++ R RR+RI+E++R LQ L+P K D ASMLDEAI Y+K L+ QVQ +
Sbjct: 131 SVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSL 181
>UNIPROTKB|Q7XT55 [details] [associations]
symbol:OSJNBa0084K20.3 "OSJNBa0076N16.1 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000141 EMBL:AL606613 EMBL:AL731617 Uniprot:Q7XT55
Length = 218
Score = 132 (51.5 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 325 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKAS-MLDEAIEYLKSLQLQVQ 383
AKR A +++ER RR RI+EK+R LQ L+P +K S MLD A++++K LQ Q+Q
Sbjct: 136 AKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQSQLQ 195
Query: 384 MM 385
+
Sbjct: 196 TL 197
>UNIPROTKB|Q651K2 [details] [associations]
symbol:B1089G05.30 "BHLH protein-like" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CM000143 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP005967 EnsemblPlants:LOC_Os06g30090.1 Uniprot:Q651K2
Length = 294
Score = 136 (52.9 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 27/63 (42%), Positives = 45/63 (71%)
Query: 325 AKRSRA--AEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQV 382
+K+ RA E + + + RR+RI+E++RALQEL+P K D +MLD AI Y+K +Q+Q+
Sbjct: 189 SKKQRANNKETQSSAAKSRRERISERLRALQELVPSGGKVDMVTMLDRAISYVKFMQMQL 248
Query: 383 QMM 385
+++
Sbjct: 249 RVL 251
>TAIR|locus:2045263 [details] [associations]
symbol:AT2G31730 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0009723 "response to
ethylene stimulus" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] InterPro:IPR011598
PROSITE:PS50888 SMART:SM00353 EMBL:CP002685 GO:GO:0003700
GO:GO:0009739 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240890 OMA:SKGLCLV EMBL:AJ576041 IPI:IPI00539360
RefSeq:NP_180732.3 UniGene:At.38180 ProteinModelPortal:Q7XJU1
SMR:Q7XJU1 DNASU:817730 EnsemblPlants:AT2G31730.1 GeneID:817730
KEGG:ath:AT2G31730 TAIR:At2g31730 InParanoid:Q7XJU1
PhylomeDB:Q7XJU1 ProtClustDB:CLSN2687695 Genevestigator:Q7XJU1
Uniprot:Q7XJU1
Length = 153
Score = 117 (46.2 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 27/87 (31%), Positives = 54/87 (62%)
Query: 302 EYHSEDVELESADAKKQ--SRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRC 359
EY + E+ + K+ S KR +++++ + S + R+D++ E++ ALQ+L+
Sbjct: 2 EYSRDSAEM-MMETKRNVYSLEDNKIKRHKSSDL-SFSSKERKDKLAERISALQQLVSPY 59
Query: 360 NKSDKASMLDEAIEYLKSLQLQVQMMS 386
K+D AS+L E ++Y++ LQ QV+++S
Sbjct: 60 GKTDTASVLLEGMQYIQFLQEQVKVLS 86
>TAIR|locus:2155543 [details] [associations]
symbol:HEC1 "HECATE 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010500 "transmitting tissue
development" evidence=IGI] [GO:0048462 "carpel formation"
evidence=IMP] [GO:0048445 "carpel morphogenesis" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:AF488618 EMBL:AK228927 IPI:IPI00530790
RefSeq:NP_201507.1 UniGene:At.28829 ProteinModelPortal:Q9FHA7
SMR:Q9FHA7 IntAct:Q9FHA7 EnsemblPlants:AT5G67060.1 GeneID:836841
KEGG:ath:AT5G67060 TAIR:At5g67060 eggNOG:NOG267961
HOGENOM:HOG000242863 InParanoid:Q9FHA7 OMA:FLFNSTH PhylomeDB:Q9FHA7
ProtClustDB:CLSN2684406 Genevestigator:Q9FHA7 GO:GO:0048462
GO:GO:0010500 Uniprot:Q9FHA7
Length = 241
Score = 133 (51.9 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 27/51 (52%), Positives = 38/51 (74%)
Query: 335 NLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 385
+++ R RR+RI+E++R LQ L+P K D ASMLDEAI Y+K L+ QVQ +
Sbjct: 134 SVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSL 184
>TAIR|locus:2059979 [details] [associations]
symbol:FBH4 "AT2G42280" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP] [GO:0046685
"response to arsenic-containing substance" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC002561 GO:GO:0048573
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG312535
HOGENOM:HOG000242890 EMBL:BT015339 EMBL:BT015712 EMBL:AK228981
IPI:IPI00530686 IPI:IPI00538142 PIR:T00937 RefSeq:NP_181757.2
RefSeq:NP_973670.1 UniGene:At.12448 UniGene:At.43726
ProteinModelPortal:Q66GR3 SMR:Q66GR3 PRIDE:Q66GR3
EnsemblPlants:AT2G42280.1 GeneID:818829 KEGG:ath:AT2G42280
TAIR:At2g42280 InParanoid:Q66GR3 OMA:NDNRANC PhylomeDB:Q66GR3
ProtClustDB:CLSN2681218 Genevestigator:Q66GR3 Uniprot:Q66GR3
Length = 359
Score = 137 (53.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 29/63 (46%), Positives = 43/63 (68%)
Query: 325 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKAS-MLDEAIEYLKSLQLQVQ 383
AKR A +++ER RR RI+E+MR LQEL+P +K S MLD A++Y+K LQ Q +
Sbjct: 281 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQYK 340
Query: 384 MMS 386
+++
Sbjct: 341 ILN 343
>UNIPROTKB|Q657A4 [details] [associations]
symbol:P0022F12.30 "Regulatory protein B-Peru-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP002908 EMBL:AP003310 EnsemblPlants:LOC_Os01g39580.1
Uniprot:Q657A4
Length = 370
Score = 137 (53.3 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 27/55 (49%), Positives = 38/55 (69%)
Query: 334 HNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMG 388
H +SERRRR+++NE L+ L+P +K DKAS+L E I YLK L+ +VQ + G
Sbjct: 189 HVMSERRRREKLNEMFLILKSLVPSIDKVDKASILSETIAYLKELERRVQELESG 243
>TAIR|locus:2205455 [details] [associations]
symbol:BIM2 "AT1G69010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC011665 EMBL:BT002352 EMBL:AY080650 EMBL:AY086798
EMBL:AF488627 IPI:IPI00519398 PIR:E96714 RefSeq:NP_177064.1
UniGene:At.35458 ProteinModelPortal:Q9CAA4 SMR:Q9CAA4 PaxDb:Q9CAA4
PRIDE:Q9CAA4 EnsemblPlants:AT1G69010.1 GeneID:843233
KEGG:ath:AT1G69010 TAIR:At1g69010 eggNOG:NOG246683
HOGENOM:HOG000070523 InParanoid:Q9CAA4 OMA:YVQYLQE PhylomeDB:Q9CAA4
ProtClustDB:CLSN2682349 Genevestigator:Q9CAA4 GermOnline:AT1G69010
Uniprot:Q9CAA4
Length = 311
Score = 135 (52.6 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 34/99 (34%), Positives = 58/99 (58%)
Query: 292 RKRKGRETDDEYHSEDV--ELESADAKKQSRGSTSAKRS-RAAEV---HNLSERRRRDRI 345
R KG + +++Y ED + E + + +K + +A+ + H+++E+RRR +I
Sbjct: 2 RTGKGNQEEEDYGEEDFNSKREGPSSNTTVHSNRDSKENDKASAIRSKHSVTEQRRRSKI 61
Query: 346 NEKMRALQELIPRCN-KSDKASMLDEAIEYLKSLQLQVQ 383
NE+ + L+ELIP K D AS L E I+Y++ LQ +VQ
Sbjct: 62 NERFQILRELIPNSEQKRDTASFLLEVIDYVQYLQEKVQ 100
>TAIR|locus:2156015 [details] [associations]
symbol:RSL1 "AT5G37800" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000006063 ProtClustDB:CLSN2681768 EMBL:AB016873
IPI:IPI00523734 RefSeq:NP_198596.1 UniGene:At.55195
ProteinModelPortal:Q9FJ00 SMR:Q9FJ00 EnsemblPlants:AT5G37800.1
GeneID:833758 KEGG:ath:AT5G37800 TAIR:At5g37800 eggNOG:NOG303056
InParanoid:Q9FJ00 OMA:MDFNASS PhylomeDB:Q9FJ00
Genevestigator:Q9FJ00 Uniprot:Q9FJ00
Length = 307
Score = 134 (52.2 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 28/76 (36%), Positives = 51/76 (67%)
Query: 315 AKKQSRGSTSAKRSRAA----EVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDE 370
+KK S G+ + +A + +L+ + RR+RI+E+++ LQEL+P K D +ML++
Sbjct: 189 SKKPSSGTNGKIKPKATTSPKDPQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEK 248
Query: 371 AIEYLKSLQLQVQMMS 386
AI Y+K LQ+QV++++
Sbjct: 249 AIGYVKFLQVQVKVLA 264
>TAIR|locus:2062235 [details] [associations]
symbol:NAI1 "AT2G22770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0007029 "endoplasmic reticulum organization" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000240300 ProtClustDB:CLSN2690866
EMBL:AF488564 EMBL:AK176248 IPI:IPI00531737 PIR:F84616
RefSeq:NP_850031.2 UniGene:At.43434 ProteinModelPortal:Q8S3F1
SMR:Q8S3F1 STRING:Q8S3F1 PRIDE:Q8S3F1 EnsemblPlants:AT2G22770.1
GeneID:816807 KEGG:ath:AT2G22770 TAIR:At2g22770 eggNOG:NOG310015
InParanoid:Q8S3F1 OMA:TDEYLID PhylomeDB:Q8S3F1
Genevestigator:Q8S3F1 Uniprot:Q8S3F1
Length = 320
Score = 134 (52.2 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 32/97 (32%), Positives = 58/97 (59%)
Query: 291 DRKRKGRETDDEYHSEDVELES-ADAKKQSRGSTSAKRS-RAAEVHNLSERRRRDRINEK 348
D K ET + S V ++ +K++ + +R + H L+ER+RR ++NE+
Sbjct: 89 DTKTNPVETSLNF-SNQVSMDQKVGSKRKDCVNNGGRREPHLLKEHVLAERKRRQKLNER 147
Query: 349 MRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 385
+ AL L+P K+DKA++L++AI++LK LQ +V+ +
Sbjct: 148 LIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKKL 184
>UNIPROTKB|Q75GI1 [details] [associations]
symbol:OSJNBa0013A09.16 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC145380
EMBL:AC135228 EMBL:AK120539 RefSeq:NP_001051131.1 UniGene:Os.7441
EnsemblPlants:LOC_Os03g51580.1 GeneID:4333965 KEGG:osa:4333965
OMA:DSCITEQ Uniprot:Q75GI1
Length = 359
Score = 136 (52.9 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 29/72 (40%), Positives = 48/72 (66%)
Query: 312 SADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEA 371
+AD K + S S+ E H L+ER+RR++++++ AL +++P K DKAS+L +A
Sbjct: 161 AADVAKAPAAAASRPASQNQE-HILAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDA 219
Query: 372 IEYLKSLQLQVQ 383
I+Y+K LQ QV+
Sbjct: 220 IKYVKQLQDQVK 231
Score = 37 (18.1 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 179 ARHMPREVASGPSNSKSVTIRESTVVDSS 207
A H PR+ A ++ S + + DSS
Sbjct: 66 AEHRPRKAAKVNTSWDSCITEQGSPADSS 94
>TAIR|locus:2028957 [details] [associations]
symbol:RHD6 "AT1G66470" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0048766 "root
hair initiation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048766 EMBL:AC074025
EMBL:AY128310 EMBL:BT006320 EMBL:AF488615 IPI:IPI00529158
PIR:C96690 RefSeq:NP_176820.1 UniGene:At.35765
ProteinModelPortal:Q9C707 SMR:Q9C707 IntAct:Q9C707
EnsemblPlants:AT1G66470.1 GeneID:842965 KEGG:ath:AT1G66470
TAIR:At1g66470 eggNOG:NOG301765 HOGENOM:HOG000006063
InParanoid:Q9C707 OMA:HESFPPP PhylomeDB:Q9C707
ProtClustDB:CLSN2681768 Genevestigator:Q9C707 Uniprot:Q9C707
Length = 298
Score = 133 (51.9 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 28/76 (36%), Positives = 50/76 (65%)
Query: 315 AKKQSRGSTSAKRSRAA----EVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDE 370
+KK S G T + + + +L+ + RR+RI+E+++ LQEL+P K D +ML++
Sbjct: 183 SKKLSSGVTGKTKPKPTTSPKDPQSLAAKNRRERISERLKILQELVPNGTKVDLVTMLEK 242
Query: 371 AIEYLKSLQLQVQMMS 386
AI Y+K LQ+QV++++
Sbjct: 243 AISYVKFLQVQVKVLA 258
>RGD|3092 [details] [associations]
symbol:Mitf "microphthalmia-associated transcription factor"
species:10116 "Rattus norvegicus" [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding transcription
factor activity involved in positive regulation of transcription"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003677 "DNA binding" evidence=IEA;ISO] [GO:0003682 "chromatin
binding" evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISO] [GO:0006461 "protein complex
assembly" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0010468 "regulation of gene expression"
evidence=ISO] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA;ISO] [GO:0030154 "cell differentiation" evidence=ISO]
[GO:0030316 "osteoclast differentiation" evidence=IEA;ISO]
[GO:0030318 "melanocyte differentiation" evidence=IEA;ISO]
[GO:0042127 "regulation of cell proliferation" evidence=IEA;ISO]
[GO:0042981 "regulation of apoptotic process" evidence=ISO]
[GO:0043010 "camera-type eye development" evidence=IEA;ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA;ISO] [GO:0043234 "protein complex" evidence=IEA;ISO]
[GO:0043473 "pigmentation" evidence=ISO] [GO:0045165 "cell fate
commitment" evidence=IEA;ISO] [GO:0045670 "regulation of osteoclast
differentiation" evidence=IEA;ISO] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0046849 "bone remodeling" evidence=IEA;ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 InterPro:IPR024097 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 RGD:3092 GO:GO:0005634 GO:GO:0043066 GO:GO:0043234
GO:GO:0006461 GO:GO:0016055 GO:GO:0003677 GO:GO:0046849 GO:GO:0003682
GO:GO:0003705 GO:GO:0042127 GO:GO:0001077 GO:GO:0043010 GO:GO:0045670
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014 GO:GO:0030318
GO:GO:0045165 GO:GO:0030316 eggNOG:NOG251286 HOGENOM:HOG000231368
OrthoDB:EOG495ZRR EMBL:AF029886 IPI:IPI00563001 UniGene:Rn.31427
ProteinModelPortal:O88368 STRING:O88368 UCSC:RGD:3092
InParanoid:O88368 ArrayExpress:O88368 Genevestigator:O88368
GermOnline:ENSRNOG00000008658 Uniprot:O88368
Length = 110
Score = 113 (44.8 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 25/70 (35%), Positives = 41/70 (58%)
Query: 318 QSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSD----KASMLDEAIE 373
+S AK + + HNL ERRRR IN++++ L LIP+ N D K ++L +++
Sbjct: 9 ESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVD 68
Query: 374 YLKSLQLQVQ 383
Y++ LQ + Q
Sbjct: 69 YIRKLQREQQ 78
>UNIPROTKB|O88368 [details] [associations]
symbol:Mitf "Microphthalmia-associated transcription
factor" species:10116 "Rattus norvegicus" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR011598
InterPro:IPR024097 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
RGD:3092 GO:GO:0005634 GO:GO:0043066 GO:GO:0043234 GO:GO:0006461
GO:GO:0016055 GO:GO:0003677 GO:GO:0046849 GO:GO:0003682
GO:GO:0003705 GO:GO:0042127 GO:GO:0001077 GO:GO:0043010
GO:GO:0045670 Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
GO:GO:0030318 GO:GO:0045165 GO:GO:0030316 eggNOG:NOG251286
HOGENOM:HOG000231368 OrthoDB:EOG495ZRR EMBL:AF029886
IPI:IPI00563001 UniGene:Rn.31427 ProteinModelPortal:O88368
STRING:O88368 UCSC:RGD:3092 InParanoid:O88368 ArrayExpress:O88368
Genevestigator:O88368 GermOnline:ENSRNOG00000008658 Uniprot:O88368
Length = 110
Score = 113 (44.8 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 25/70 (35%), Positives = 41/70 (58%)
Query: 318 QSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSD----KASMLDEAIE 373
+S AK + + HNL ERRRR IN++++ L LIP+ N D K ++L +++
Sbjct: 9 ESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVD 68
Query: 374 YLKSLQLQVQ 383
Y++ LQ + Q
Sbjct: 69 YIRKLQREQQ 78
>TAIR|locus:2039445 [details] [associations]
symbol:AMS "AT2G16910" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009555 "pollen development" evidence=IMP] [GO:0048658 "tapetal
layer development" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009555 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC005167 EMBL:AF488565 IPI:IPI00529182 PIR:G84545
RefSeq:NP_179283.2 UniGene:At.48482 UniGene:At.70395
ProteinModelPortal:Q9ZVX2 SMR:Q9ZVX2 STRING:Q9ZVX2 PRIDE:Q9ZVX2
EnsemblPlants:AT2G16910.1 GeneID:816194 KEGG:ath:AT2G16910
TAIR:At2g16910 eggNOG:NOG313389 HOGENOM:HOG000033929
InParanoid:Q9ZVX2 OMA:PRTKSCE PhylomeDB:Q9ZVX2
ProtClustDB:CLSN2690121 ArrayExpress:Q9ZVX2 Genevestigator:Q9ZVX2
GO:GO:0048658 Uniprot:Q9ZVX2
Length = 571
Score = 136 (52.9 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 33/90 (36%), Positives = 54/90 (60%)
Query: 290 EDRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKM 349
+D GR S+ ++ E D K + + S K S+A + ++ERRRR ++N+++
Sbjct: 277 KDMNENGRVDSGSDCSDQIDDED-DPKYKKK---SGKGSQAKNL--MAERRRRKKLNDRL 330
Query: 350 RALQELIPRCNKSDKASMLDEAIEYLKSLQ 379
AL+ L+PR K D+AS+L +AI Y+K LQ
Sbjct: 331 YALRSLVPRITKLDRASILGDAINYVKELQ 360
>TAIR|locus:2012393 [details] [associations]
symbol:AT1G68810 "AT1G68810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC011914 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC011665 EMBL:AY072161 EMBL:AY122983
IPI:IPI00517468 PIR:H96712 RefSeq:NP_564944.1 UniGene:At.46879
HSSP:P22415 ProteinModelPortal:Q9S7Y1 SMR:Q9S7Y1
EnsemblPlants:AT1G68810.1 GeneID:843213 KEGG:ath:AT1G68810
TAIR:At1g68810 eggNOG:NOG328059 HOGENOM:HOG000243133
InParanoid:Q9S7Y1 OMA:FVIKASL PhylomeDB:Q9S7Y1
ProtClustDB:CLSN2689090 Genevestigator:Q9S7Y1 Uniprot:Q9S7Y1
Length = 368
Score = 133 (51.9 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 310 LESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLD 369
L++ K ++ AK A++ H+ +ERRRR+RIN + L+ ++P K+DKAS+L
Sbjct: 154 LQAELGKMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLA 213
Query: 370 EAIEYLKSLQLQVQMMS 386
E I+++K L+ + ++S
Sbjct: 214 EVIQHVKELKRETSVIS 230
>TAIR|locus:2033015 [details] [associations]
symbol:MEE8 "AT1G25310" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=IMP]
InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0009793 Gene3D:4.10.280.10 EMBL:AC079374
IPI:IPI00520631 RefSeq:NP_173902.1 UniGene:At.51765
ProteinModelPortal:Q9FRI0 SMR:Q9FRI0 EnsemblPlants:AT1G25310.1
GeneID:839115 KEGG:ath:AT1G25310 TAIR:At1g25310
Genevestigator:Q9FRI0 Uniprot:Q9FRI0
Length = 145
Score = 112 (44.5 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 32/103 (31%), Positives = 50/103 (48%)
Query: 288 AAEDRKRKGRETDDEYHSEDVELESADAKKQSRGSTSA--KRSRAAEVHNLSERRRRDRI 345
A D +R E E + ES K+ R T K S ++ L +++RR+RI
Sbjct: 23 ANSDLRRINNEKGVEKVGQKRSAESRREGKKKRVKTQCVIKSSDKSDHDTLLKKKRRERI 82
Query: 346 NEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMG 388
++ L+E+ P C +SD ++LD IEY +L+L S G
Sbjct: 83 RRQLETLKEITPNCPQSDINAILDCVIEYTNNLRLAHYKGSQG 125
>UNIPROTKB|Q2R3F6 [details] [associations]
symbol:Os11g0523700 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000010 EMBL:AP008217 GO:GO:0050826
GO:GO:0010440 Gene3D:4.10.280.10 SUPFAM:SSF47459
RefSeq:NP_001067987.2 UniGene:Os.56356
EnsemblPlants:LOC_Os11g32100.1 GeneID:4350609 KEGG:osa:4350609
OMA:DGKDSNA Uniprot:Q2R3F6
Length = 524
Score = 135 (52.6 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 31/83 (37%), Positives = 52/83 (62%)
Query: 303 YHSEDVEL-ESADAKKQSRGSTSAK-----RSRAAEVHNL-SERRRRDRINEKMRALQEL 355
Y SED E + AKK+S +++ + + NL +ERRRR ++N+++ L+ +
Sbjct: 299 YDSEDARGGEDSGAKKESNANSTVTGDGKGKKKGMPAKNLMAERRRRKKLNDRLYMLRSV 358
Query: 356 IPRCNKSDKASMLDEAIEYLKSL 378
+P+ +K D+AS+L +AIEYLK L
Sbjct: 359 VPKISKMDRASILGDAIEYLKEL 381
>UNIPROTKB|Q8S0C6 [details] [associations]
symbol:B1112D09.6 "Uncharacterized protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000138
HSSP:P01106 EMBL:AP003432 EMBL:AK106333
EnsemblPlants:LOC_Os01g39330.1 eggNOG:NOG273636 OMA:LNDSFHT
Uniprot:Q8S0C6
Length = 454
Score = 134 (52.2 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 23/67 (34%), Positives = 46/67 (68%)
Query: 317 KQSRGSTSAKRSRAAEV-HNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYL 375
+Q + +A + ++++ H +SER+RR+++N+ L+ L+P C+K DK ++L A +YL
Sbjct: 249 RQQEEAAAASATNSSQLYHMMSERKRREKLNDSFHTLRSLLPPCSKKDKTTVLINAAKYL 308
Query: 376 KSLQLQV 382
KSL+ ++
Sbjct: 309 KSLETEI 315
>UNIPROTKB|Q6ZA99 [details] [associations]
symbol:P0431A03.9 "Os08g0432800 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:AP008214 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP004666 EMBL:AK109616 RefSeq:NP_001061870.1
UniGene:Os.56209 EnsemblPlants:LOC_Os08g33590.1 GeneID:4345648
KEGG:osa:4345648 eggNOG:NOG311977 OMA:TSAMMED
ProtClustDB:CLSN2697339 Uniprot:Q6ZA99
Length = 345
Score = 132 (51.5 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 28/61 (45%), Positives = 39/61 (63%)
Query: 325 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 384
AK A+ H+ +ERRRR RIN + L+ L+P K+DKAS+L E IE++K L+ Q
Sbjct: 116 AKALAASRSHSEAERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVIEHVKELKRQTSA 175
Query: 385 M 385
M
Sbjct: 176 M 176
>TAIR|locus:2089418 [details] [associations]
symbol:AT3G21330 "AT3G21330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP001305 EMBL:AF488617 EMBL:BT004279 EMBL:BT020364
IPI:IPI00541948 RefSeq:NP_188770.1 UniGene:At.38078
ProteinModelPortal:Q8S3D2 SMR:Q8S3D2 EnsemblPlants:AT3G21330.1
GeneID:821687 KEGG:ath:AT3G21330 TAIR:At3g21330 eggNOG:NOG330001
HOGENOM:HOG000095219 InParanoid:Q9LIG3 OMA:LMARELC PhylomeDB:Q8S3D2
ProtClustDB:CLSN2685101 Genevestigator:Q8S3D2 Uniprot:Q8S3D2
Length = 373
Score = 132 (51.5 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 330 AAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 385
+ + ++ R+RR+RI+EK+R LQ L+P K D ASMLDEA YLK L+ QV+ +
Sbjct: 276 STDPQTVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKAL 331
>UNIPROTKB|Q7X7U7 [details] [associations]
symbol:OSJNBb0091E11.4 "OJ990528_30.9 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008210
EMBL:CM000141 EMBL:AL606629 EMBL:AK059273 EMBL:AK101636
EMBL:AL662938 RefSeq:NP_001053182.1 UniGene:Os.55009
EnsemblPlants:LOC_Os04g41570.1 EnsemblPlants:LOC_Os04g41570.2
EnsemblPlants:LOC_Os04g41570.3 GeneID:4336261 KEGG:osa:4336261
eggNOG:NOG241248 OMA:SKGLCLV Uniprot:Q7X7U7
Length = 156
Score = 113 (44.8 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 28/87 (32%), Positives = 49/87 (56%)
Query: 304 HSEDVELESADAKKQSR--GSTSAKRSRAAEVHN--LSERRRRDRINEKMRALQELIPRC 359
H+E A S GS ++K+ R + +S + ++D+I E++ ALQ+L+
Sbjct: 14 HNESYFTGKAAVTSSSEEFGSMTSKKPRNTSPRDAPVSPKEKKDKIGERVAALQQLVSPF 73
Query: 360 NKSDKASMLDEAIEYLKSLQLQVQMMS 386
K+D AS+L EA Y+K L Q++++S
Sbjct: 74 GKTDTASVLQEASGYIKFLHQQLEVLS 100
>TAIR|locus:2134583 [details] [associations]
symbol:AT4G00870 "AT4G00870" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161472 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF013294 EMBL:AJ519812 IPI:IPI00537799 PIR:T01559
RefSeq:NP_567195.1 UniGene:At.34506 ProteinModelPortal:O23090
SMR:O23090 EnsemblPlants:AT4G00870.1 GeneID:827990
KEGG:ath:AT4G00870 TAIR:At4g00870 eggNOG:NOG285642
InParanoid:O23090 OMA:SIECELM PhylomeDB:O23090
ProtClustDB:CLSN2917469 Genevestigator:O23090 Uniprot:O23090
Length = 423
Score = 134 (52.2 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 27/97 (27%), Positives = 56/97 (57%)
Query: 286 KPAAEDRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRI 345
KPA D + G + ++ SE + + + +T K A H +E++RR+++
Sbjct: 206 KPAVSDHSKSGNQ---QFGSERKRRRKLETTRVA-AATKEKHHPAVLSHVEAEKQRREKL 261
Query: 346 NEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQV 382
N + AL+ ++P+ ++ DKAS+L +A+ Y++SL+ ++
Sbjct: 262 NHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKI 298
Score = 37 (18.1 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 11/34 (32%), Positives = 14/34 (41%)
Query: 25 PRKSAMAEEDVMELLWQNGPVVLHNQNQRSLKKS 58
PRK E L+W GP L N K++
Sbjct: 120 PRKEVSDES----LVWLTGPDELRFSNYERAKEA 149
>UNIPROTKB|Q6Z339 [details] [associations]
symbol:B1121A12.20 "Os02g0726700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
EMBL:AP008208 EMBL:AP005284 RefSeq:NP_001047993.1 UniGene:Os.52592
GeneID:4330593 KEGG:osa:4330593 ProtClustDB:CLSN2919237
Uniprot:Q6Z339
Length = 344
Score = 130 (50.8 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 30/75 (40%), Positives = 49/75 (65%)
Query: 311 ESADAKKQSRGSTSAKR-SRAAEVHNLSERRRRDRINEKMRALQELIPRCN-KSDKASML 368
E+ A+ +S S++ + S H+ +E+RRR +IN+++ L+EL+P + K DKAS L
Sbjct: 126 EATRAEGRSSASSADQGPSTPRSKHSATEQRRRTKINDRLEILRELLPHTDQKRDKASFL 185
Query: 369 DEAIEYLKSLQLQVQ 383
E IEY++ LQ +VQ
Sbjct: 186 SEVIEYIRFLQEKVQ 200
>TAIR|locus:2085964 [details] [associations]
symbol:BHLH32 "AT3G25710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0016036 "cellular response to phosphate
starvation" evidence=IMP] [GO:0080147 "root hair cell development"
evidence=IMP] [GO:0048364 "root development" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AB028607
GO:GO:0003677 GO:GO:0009718 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0016036
HOGENOM:HOG000243133 ProtClustDB:CLSN2689090 EMBL:DQ205679
EMBL:AY058840 EMBL:AY079033 EMBL:AY086383 EMBL:AF488571
IPI:IPI00523379 RefSeq:NP_189199.1 UniGene:At.22148
ProteinModelPortal:Q9LS08 SMR:Q9LS08 IntAct:Q9LS08 STRING:Q9LS08
PRIDE:Q9LS08 EnsemblPlants:AT3G25710.1 GeneID:822159
KEGG:ath:AT3G25710 TAIR:At3g25710 eggNOG:NOG304577 OMA:RERINTH
PhylomeDB:Q9LS08 Genevestigator:Q9LS08 GO:GO:0080147 Uniprot:Q9LS08
Length = 344
Score = 130 (50.8 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 325 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 384
AK A++ H+ +ERRRR+RIN + L+ ++P K+DKAS+L E I+++K L+ Q
Sbjct: 127 AKALAASKSHSEAERRRRERINTHLAKLRSILPNTTKTDKASLLAEVIQHMKELKRQTSQ 186
Query: 385 MS 386
++
Sbjct: 187 IT 188
>FB|FBgn0039509 [details] [associations]
symbol:bigmax "bigmax" species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;NAS] [GO:0005634 "nucleus" evidence=ISS;NAS]
[GO:0006351 "transcription, DNA-dependent" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0035071 "salivary gland cell autophagic cell
death" evidence=IEP] [GO:0048102 "autophagic cell death"
evidence=IEP] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0007517 "muscle organ development" evidence=IMP]
[GO:0048813 "dendrite morphogenesis" evidence=IMP] [GO:0008343
"adult feeding behavior" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0006355
GO:GO:0008343 GO:GO:0048813 GO:GO:0007517 GO:GO:0035071
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P01106 eggNOG:NOG259028
EMBL:AF213669 ProteinModelPortal:Q9GQP6 SMR:Q9GQP6 STRING:Q9GQP6
PaxDb:Q9GQP6 PRIDE:Q9GQP6 FlyBase:FBgn0039509 InParanoid:Q9GQP6
OrthoDB:EOG4V41QS ArrayExpress:Q9GQP6 Bgee:Q9GQP6 Uniprot:Q9GQP6
Length = 254
Score = 127 (49.8 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 31/86 (36%), Positives = 49/86 (56%)
Query: 304 HSEDVELESADAKKQSRG-STSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS 362
H+ D + +S DA+ + ST + + R E H +E++RRD I + +LQEL+PRC +
Sbjct: 45 HNSDDDDDSGDARHSAAANSTLSYKERRREAHTQAEQKRRDAIKKGYDSLQELVPRCQPN 104
Query: 363 D-------KASMLDEAIEYLKSLQLQ 381
D KA +L ++IEY+ L Q
Sbjct: 105 DSSGYKLSKALILQKSIEYIGYLNQQ 130
>TAIR|locus:2039094 [details] [associations]
symbol:AIB "AT2G46510" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009611 "response to wounding" evidence=IEP;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA;IMP]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0009414
"response to water deprivation" evidence=RCA] [GO:0009620 "response
to fungus" evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic
process" evidence=RCA] [GO:0009723 "response to ethylene stimulus"
evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0009737
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009611
GO:GO:0009738 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC006526 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC006418
EMBL:AY094399 IPI:IPI00535471 PIR:G84903 RefSeq:NP_566078.1
UniGene:At.19872 ProteinModelPortal:Q9ZPY8 SMR:Q9ZPY8 PaxDb:Q9ZPY8
PRIDE:Q9ZPY8 EnsemblPlants:AT2G46510.1 GeneID:819262
KEGG:ath:AT2G46510 TAIR:At2g46510 eggNOG:NOG313259
HOGENOM:HOG000238207 InParanoid:Q9ZPY8 OMA:KIMEDER PhylomeDB:Q9ZPY8
ProtClustDB:CLSN2917347 Genevestigator:Q9ZPY8 InterPro:IPR025610
Pfam:PF14215 Uniprot:Q9ZPY8
Length = 566
Score = 133 (51.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 28/73 (38%), Positives = 47/73 (64%)
Query: 314 DAKK-QSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAI 372
D K+ + RG A H +ER+RR+++N++ AL+ ++P +K DKAS+L +AI
Sbjct: 375 DEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAI 434
Query: 373 EYLKSLQLQVQMM 385
Y+K LQ +V++M
Sbjct: 435 SYIKELQEKVKIM 447
>UNIPROTKB|Q6ESL3 [details] [associations]
symbol:OJ1294_G06.8 "DNA binding protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP005093 ProteinModelPortal:Q6ESL3
EnsemblPlants:LOC_Os09g24490.1 KEGG:dosa:Os09t0410700-00
Gramene:Q6ESL3 OMA:RRHECIA Uniprot:Q6ESL3
Length = 363
Score = 130 (50.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 29/72 (40%), Positives = 44/72 (61%)
Query: 310 LESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLD 369
L++ + +R AK A+ H+ +ERRRR RIN + L+ L+P K+DKAS+L
Sbjct: 86 LQAELGRVTAREIMDAKALAASRSHSEAERRRRQRINGHLARLRSLLPNTTKTDKASLLA 145
Query: 370 EAIEYLKSLQLQ 381
E IE++K L+ Q
Sbjct: 146 EVIEHVKELKRQ 157
>UNIPROTKB|Q9FTQ1 [details] [associations]
symbol:P0665D10.21 "DNA binding protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:AP002861 EMBL:AP002745 RefSeq:NP_001042409.1 UniGene:Os.26488
STRING:Q9FTQ1 GeneID:4324583 KEGG:osa:4324583 OMA:VRFTFLI
ProtClustDB:CLSN2691217 Uniprot:Q9FTQ1
Length = 267
Score = 127 (49.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 29/93 (31%), Positives = 52/93 (55%)
Query: 287 PAAEDRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRIN 346
PA +D + +G + +E+ AK+ G K + A + H+ +ERRRR+RIN
Sbjct: 39 PALDDGETEGMDASAAAAVAAMEM----AKRNCGGGREEKAAMALKSHSEAERRRRERIN 94
Query: 347 EKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 379
+ L+ ++P +K DKA++L E + ++K L+
Sbjct: 95 AHLATLRTMVPCTDKMDKAALLAEVVGHVKKLK 127
>TAIR|locus:2026037 [details] [associations]
symbol:FBH3 "AT1G51140" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0048573 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC079828 EMBL:AY034941 EMBL:AY063120
IPI:IPI00519239 PIR:H96548 RefSeq:NP_564583.1 UniGene:At.19155
ProteinModelPortal:Q9C690 SMR:Q9C690 PaxDb:Q9C690 PRIDE:Q9C690
EnsemblPlants:AT1G51140.1 GeneID:841537 KEGG:ath:AT1G51140
TAIR:At1g51140 eggNOG:NOG312535 HOGENOM:HOG000242890
InParanoid:Q9C690 OMA:TKDEDSA PhylomeDB:Q9C690
ProtClustDB:CLSN2917227 Genevestigator:Q9C690 Uniprot:Q9C690
Length = 379
Score = 130 (50.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 27/62 (43%), Positives = 44/62 (70%)
Query: 325 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCN-KSDKASMLDEAIEYLKSLQLQVQ 383
AKR A +++ER RR +I+E+MR LQ+L+P + +++ A MLD A++Y+K LQ QV+
Sbjct: 306 AKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQVK 365
Query: 384 MM 385
+
Sbjct: 366 AL 367
>TAIR|locus:2026629 [details] [associations]
symbol:EGL3 "AT1G63650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009957 "epidermal
cell fate specification" evidence=RCA;IMP] [GO:0001708 "cell fate
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009913 "epidermal cell
differentiation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251687 EMBL:AF013465
EMBL:AF027732 EMBL:AC011622 IPI:IPI00545374 PIR:D96661
RefSeq:NP_001185302.1 RefSeq:NP_176552.1 RefSeq:NP_974080.1
UniGene:At.25024 ProteinModelPortal:Q9CAD0 SMR:Q9CAD0 IntAct:Q9CAD0
STRING:Q9CAD0 PRIDE:Q9CAD0 EnsemblPlants:AT1G63650.1
EnsemblPlants:AT1G63650.2 EnsemblPlants:AT1G63650.3 GeneID:842669
KEGG:ath:AT1G63650 GeneFarm:1894 TAIR:At1g63650 eggNOG:NOG320411
HOGENOM:HOG000237985 InParanoid:Q9CAD0 OMA:ERASANC PhylomeDB:Q9CAD0
ProtClustDB:CLSN2682588 Genevestigator:Q9CAD0 GermOnline:AT1G63650
GO:GO:0009957 Uniprot:Q9CAD0
Length = 596
Score = 137 (53.3 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 334 HNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQ 383
H LSE++RR+++NE+ L+ +IP +K DK S+LD+ IEYL+ LQ +VQ
Sbjct: 406 HALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQ 455
Score = 37 (18.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 18 TSSVLNRPRKSAMAEEDVMELLW 40
+S V R +A++ ED+ + W
Sbjct: 94 SSQVTRRASAAALSPEDLTDTEW 116
>UNIPROTKB|Q7XPS7 [details] [associations]
symbol:OSJNBa0065O17.4 "OSJNBa0065O17.4 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL606682
ProteinModelPortal:Q7XPS7 Gramene:Q7XPS7 Uniprot:Q7XPS7
Length = 567
Score = 132 (51.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 28/65 (43%), Positives = 44/65 (67%)
Query: 320 RGSTSAKRSRAA-EVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSL 378
RGS +A + + H +SERRRR+++NE L+ ++P +K DKAS+L+E I YLK L
Sbjct: 378 RGSRAALTQESGIKNHVISERRRREKLNEMFLILKSIVPSIHKVDKASILEETIAYLKVL 437
Query: 379 QLQVQ 383
+ +V+
Sbjct: 438 EKRVK 442
>UNIPROTKB|Q94HA7 [details] [associations]
symbol:OSJNBb0048A17.16 "Os03g0759700 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000009 EMBL:AP008209
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140 eggNOG:NOG294378
EMBL:AC084282 EMBL:AK072833 RefSeq:NP_001051340.1 UniGene:Os.51847
EnsemblPlants:LOC_Os03g55220.1 EnsemblPlants:LOC_Os03g55220.2
GeneID:4334181 KEGG:osa:4334181 OMA:PTTECSS ProtClustDB:CLSN2694316
Uniprot:Q94HA7
Length = 317
Score = 128 (50.1 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 32/73 (43%), Positives = 45/73 (61%)
Query: 316 KKQSRGSTSAKRSR--AAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIE 373
KK SRG K + AA N R RR+R+ E++ ALQ+L+ KSD AS+L EA+
Sbjct: 134 KKGSRGCDQRKATAPAAATTTNKRPRVRRERLGERIIALQQLVSPFGKSDTASVLHEALG 193
Query: 374 YLKSLQLQVQMMS 386
Y++ L QVQ++S
Sbjct: 194 YIRFLHDQVQVLS 206
>UNIPROTKB|Q2QLR0 [details] [associations]
symbol:LOC_Os12g43620 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011
KEGG:dosa:Os12t0632600-00 Gramene:Q2QLR0 OMA:TNVMPFP Uniprot:Q2QLR0
Length = 338
Score = 128 (50.1 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 28/75 (37%), Positives = 47/75 (62%)
Query: 313 ADAKKQSRGSTSAKRSRAAEV--HNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDE 370
A KK G +S+ + V H ++ERRRR++IN++ L +IP K DKA++L +
Sbjct: 145 AAVKKGGGGGSSSSAAAPGYVQDHIIAERRRREKINQRFIELSTVIPGLKKMDKATILGD 204
Query: 371 AIEYLKSLQLQVQMM 385
A++Y+K LQ +V+ +
Sbjct: 205 AVKYVKELQEKVKTL 219
>TAIR|locus:2035237 [details] [associations]
symbol:AT1G01260 "AT1G01260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009694 "jasmonic acid metabolic process" evidence=RCA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG313259 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF251698 EMBL:AC023628 EMBL:AF488559
EMBL:AY079012 EMBL:AY120752 EMBL:BT004517 IPI:IPI00539052
PIR:H86142 RefSeq:NP_001077440.1 RefSeq:NP_001184883.1
RefSeq:NP_171634.1 UniGene:At.28312 ProteinModelPortal:Q9LNJ5
SMR:Q9LNJ5 IntAct:Q9LNJ5 EnsemblPlants:AT1G01260.1
EnsemblPlants:AT1G01260.2 EnsemblPlants:AT1G01260.3 GeneID:839545
KEGG:ath:AT1G01260 TAIR:At1g01260 InParanoid:Q9LNJ5 OMA:FPANYCY
PhylomeDB:Q9LNJ5 ProtClustDB:CLSN2682849 Genevestigator:Q9LNJ5
Uniprot:Q9LNJ5
Length = 590
Score = 131 (51.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 25/75 (33%), Positives = 47/75 (62%)
Query: 311 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDE 370
ES + + + RG A A H +ER+RR+++N++ AL+ ++P +K DKAS+L +
Sbjct: 411 ESGNNRPRKRGRRPANGRAEALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGD 470
Query: 371 AIEYLKSLQLQVQMM 385
A+ Y+ L ++++M
Sbjct: 471 AVSYINELHAKLKVM 485
>UNIPROTKB|Q9ASJ3 [details] [associations]
symbol:P0439B06.24 "Putative uncharacterized protein
P0439B06.24" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP002882 UniGene:Os.30617
ProteinModelPortal:Q9ASJ3 Gramene:Q9ASJ3 OMA:KAITYVK
ProtClustDB:CLSN2918925 Uniprot:Q9ASJ3
Length = 294
Score = 126 (49.4 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 25/76 (32%), Positives = 48/76 (63%)
Query: 311 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDE 370
++A A S + + + + + + RR+RI+E+++ LQ+L+P K D +ML++
Sbjct: 186 KAASASSPSPSPSPSPSPNKEQPQSAAAKVRRERISERLKVLQDLVPNGTKVDLVTMLEK 245
Query: 371 AIEYLKSLQLQVQMMS 386
AI Y+K LQLQV++++
Sbjct: 246 AINYVKFLQLQVKVLA 261
>TAIR|locus:2062230 [details] [associations]
symbol:AT2G22760 "AT2G22760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
EMBL:AF488563 EMBL:DQ446550 EMBL:DQ653016 IPI:IPI00530407
PIR:E84616 RefSeq:NP_179861.2 UniGene:At.39393
ProteinModelPortal:Q1PF16 SMR:Q1PF16 IntAct:Q1PF16 PRIDE:Q1PF16
EnsemblPlants:AT2G22760.1 GeneID:816806 KEGG:ath:AT2G22760
TAIR:At2g22760 eggNOG:NOG292366 InParanoid:Q1PF16 OMA:GCMINIL
PhylomeDB:Q1PF16 ProtClustDB:CLSN2690866 Genevestigator:Q1PF16
Uniprot:Q1PF16
Length = 295
Score = 126 (49.4 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 29/83 (34%), Positives = 52/83 (62%)
Query: 305 SEDVELESADAKKQSRGSTS-AKRSRA-AEVHNLSERRRRDRINEKMRALQELIPRCNKS 362
+E++ ++ + R + S RS A+ H L+ER+RR++++EK AL L+P K+
Sbjct: 89 AEEIIMDKLVGRGTKRKTCSHGTRSPVLAKEHVLAERKRREKLSEKFIALSALLPGLKKA 148
Query: 363 DKASMLDEAIEYLKSLQLQVQMM 385
DK ++LD+AI +K LQ Q++ +
Sbjct: 149 DKVTILDDAISRMKQLQEQLRTL 171
>UNIPROTKB|F1PZY3 [details] [associations]
symbol:ARNTL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0000982 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0007623 GO:GO:0045944 GO:GO:0005667 GO:GO:0004871
GO:GO:0000982 SMART:SM00086 TIGRFAMs:TIGR00229
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
OMA:IPQCNPM EMBL:AAEX03015178 Ensembl:ENSCAFT00000017664
Uniprot:F1PZY3
Length = 624
Score = 131 (51.2 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 26/79 (32%), Positives = 47/79 (59%)
Query: 305 SEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCN---- 360
S +E+ ++ + G K ++ E H+ +E+RRRD++N + L +IP+CN
Sbjct: 72 STRIEISASSGSRMEDGEQQVKMNQLREAHSQTEKRRRDKMNNLIEELSAMIPQCNPVPR 131
Query: 361 KSDKASMLDEAIEYLKSLQ 379
K DK ++L A+++LKSL+
Sbjct: 132 KLDKLTVLRMAVQHLKSLK 150
>UNIPROTKB|Q84LF9 [details] [associations]
symbol:RERJ1 "Transcription Factor" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P01106 EMBL:AB040744
ProteinModelPortal:Q84LF9 Gramene:Q84LF9 Genevestigator:Q84LF9
Uniprot:Q84LF9
Length = 310
Score = 125 (49.1 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 24/50 (48%), Positives = 36/50 (72%)
Query: 336 LSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 385
L ER RR ++NEK+ AL+ ++P K DKAS++ +AIEY++ LQ + Q M
Sbjct: 96 LMERDRRRKLNEKLYALRSVVPNITKMDKASIIKDAIEYIQRLQAEEQQM 145
Score = 39 (18.8 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 200 ESTVVDSS-DTPAPGPDSRASEAMRSMEGASG 230
ES+ D S + AP P + +A ++ G+ G
Sbjct: 40 ESSSPDGSHSSSAPAPAAVGGDAAAAVAGSGG 71
>TAIR|locus:504954829 [details] [associations]
symbol:GL3 "AT5G41315" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;NAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0010091 "trichome branching" evidence=IMP]
[GO:0001708 "cell fate specification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0009957 "epidermal cell fate
specification" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215
GO:GO:0010091 HSSP:P61244 EMBL:AB006707 eggNOG:NOG320411
HOGENOM:HOG000237985 ProtClustDB:CLSN2682588 GO:GO:0009957
EMBL:AF246291 IPI:IPI00543830 RefSeq:NP_680372.1 UniGene:At.27204
ProteinModelPortal:Q9FN69 SMR:Q9FN69 IntAct:Q9FN69 STRING:Q9FN69
EnsemblPlants:AT5G41315.1 GeneID:834133 KEGG:ath:AT5G41315
TAIR:At5g41315 InParanoid:Q9FN69 OMA:ERTSANC PhylomeDB:Q9FN69
Genevestigator:Q9FN69 Uniprot:Q9FN69
Length = 637
Score = 131 (51.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 23/50 (46%), Positives = 38/50 (76%)
Query: 334 HNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQ 383
H + E++RR+++NE+ L+++IP NK DK S+LD+ IEYL+ L+ +VQ
Sbjct: 442 HAVLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQ 491
>TAIR|locus:2062225 [details] [associations]
symbol:AT2G22750 "AT2G22750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF488562 EMBL:DQ446549
EMBL:DQ653015 IPI:IPI00538506 IPI:IPI00846694 PIR:D84616
RefSeq:NP_001077944.1 RefSeq:NP_179860.2 UniGene:At.39395
ProteinModelPortal:Q1PF17 SMR:Q1PF17 EnsemblPlants:AT2G22750.2
GeneID:816805 KEGG:ath:AT2G22750 TAIR:At2g22750 eggNOG:NOG266714
HOGENOM:HOG000240300 InParanoid:Q8S3F3 OMA:FDISIIA PhylomeDB:Q1PF17
ProtClustDB:CLSN2690865 Genevestigator:Q1PF17 Uniprot:Q1PF17
Length = 305
Score = 125 (49.1 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 33/88 (37%), Positives = 55/88 (62%)
Query: 303 YHSEDVELESADAKKQS---RGSTSAK---RSRA-AEVHNLSERRRRDRINEKMRALQEL 355
+ +D E+ + KK RG+ A+ RS++ A+ H L+ER+RR+++ ++ AL L
Sbjct: 89 FSPKDEEIGLPEHKKAELIIRGTKRAQSLTRSQSNAQDHILAERKRREKLTQRFVALSAL 148
Query: 356 IPRCNKSDKASMLDEAIEYLKSLQLQVQ 383
IP K DKAS+L +AI+++K LQ V+
Sbjct: 149 IPGLKKMDKASVLGDAIKHIKYLQESVK 176
>TAIR|locus:2090847 [details] [associations]
symbol:ICE1 "AT3G26744" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA;TAS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=IEP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0050826 "response to freezing"
evidence=RCA;IMP] [GO:0010440 "stomatal lineage progression"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0019915 "lipid
storage" evidence=RCA] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0048522 "positive regulation of
cellular process" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0050826 EMBL:AB016889 GO:GO:0010440
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB026648 EMBL:AY195621
EMBL:AY079016 EMBL:BT020379 EMBL:AK228443 IPI:IPI00518051
IPI:IPI00656676 RefSeq:NP_001030774.1 RefSeq:NP_001030776.2
RefSeq:NP_189309.2 UniGene:At.25302 ProteinModelPortal:Q9LSE2
SMR:Q9LSE2 STRING:Q9LSE2 PaxDb:Q9LSE2 PRIDE:Q9LSE2
EnsemblPlants:AT3G26744.1 EnsemblPlants:AT3G26744.2
EnsemblPlants:AT3G26744.4 GeneID:822287 KEGG:ath:AT3G26744
TAIR:At3g26744 eggNOG:NOG236974 HOGENOM:HOG000085036
InParanoid:Q9LSE2 OMA:NSESSGM PhylomeDB:Q9LSE2
ProtClustDB:CLSN2690572 Genevestigator:Q9LSE2 GermOnline:AT3G26744
Uniprot:Q9LSE2
Length = 494
Score = 128 (50.1 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 28/90 (31%), Positives = 49/90 (54%)
Query: 291 DRKRKGRETDD-EYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNL-SERRRRDRINEK 348
D G E Y S+++ A+ G + + NL +ERRRR ++N++
Sbjct: 263 DMDETGIEVSGLNYESDEINESGKAAESVQIGGGGKGKKKGMPAKNLMAERRRRKKLNDR 322
Query: 349 MRALQELIPRCNKSDKASMLDEAIEYLKSL 378
+ L+ ++P+ +K D+AS+L +AI+YLK L
Sbjct: 323 LYMLRSVVPKISKMDRASILGDAIDYLKEL 352
>UNIPROTKB|F1S6X1 [details] [associations]
symbol:LOC100738978 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 PRINTS:PR00785 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 GO:GO:0005737
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CU914667
Ensembl:ENSSSCT00000014635 OMA:KKXILNG Uniprot:F1S6X1
Length = 273
Score = 123 (48.4 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 31/94 (32%), Positives = 53/94 (56%)
Query: 291 DRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSR-AAEVHNLSERRRRDRINEKM 349
+RKRKG TD + E ++ + D + + R + A E H+ E+RRRD++N +
Sbjct: 36 NRKRKGSSTD---YQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFI 92
Query: 350 RALQELIPRCN----KSDKASMLDEAIEYLKSLQ 379
L L+P CN K DK ++L A++++K+L+
Sbjct: 93 DELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
Score = 37 (18.1 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 207 SDTPAPGPDSRASEAMRSMEGASGVNNNNR 236
SD +PG A++ + S G SGV+ N +
Sbjct: 13 SDFMSPG----ATDLLSSPLGTSGVDCNRK 38
>TAIR|locus:2152262 [details] [associations]
symbol:BIM3 "AT5G38860" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000070523 EMBL:AB009048 EMBL:AJ630499 EMBL:AY568671
EMBL:BT033131 IPI:IPI00534511 RefSeq:NP_198702.2 UniGene:At.50495
ProteinModelPortal:Q9FMB6 SMR:Q9FMB6 IntAct:Q9FMB6 PRIDE:Q9FMB6
EnsemblPlants:AT5G38860.1 GeneID:833877 KEGG:ath:AT5G38860
TAIR:At5g38860 eggNOG:NOG267159 InParanoid:Q9FMB6 OMA:TETRSFC
PhylomeDB:Q9FMB6 ProtClustDB:CLSN2918639 Genevestigator:Q9FMB6
Uniprot:Q9FMB6
Length = 298
Score = 124 (48.7 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 36/89 (40%), Positives = 54/89 (60%)
Query: 304 HSEDVELESADAKKQ--SRG-STSAKRSRAA--EVHNLSERRRRDRINEKMRALQELIPR 358
H D +LE AD SR S++ +R+R + H+ +E+RRR +INE+ ++L ++IP+
Sbjct: 4 HDIDDQLE-ADVYSNLPSRNDSSTGRRNRNSCRSKHSETEQRRRSKINERFQSLMDIIPQ 62
Query: 359 CN---KSDKASMLDEAIEYLKSLQLQVQM 384
K DKAS L E IEY+ LQ +V M
Sbjct: 63 NQNDQKRDKASFLLEVIEYIHFLQEKVHM 91
>UNIPROTKB|Q948Y2 [details] [associations]
symbol:Plw-OSB2 "R-type basic helix-loop-helix protein"
species:4530 "Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 HOGENOM:HOG000237985 EMBL:AB021080
ProteinModelPortal:Q948Y2 Gramene:Q948Y2 Genevestigator:Q948Y2
Uniprot:Q948Y2
Length = 451
Score = 127 (49.8 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 320 RGSTSAKRSRAAEV--HNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKS 377
RGS + + + + H +SERRRR+++NE L+ L+P K DKAS+L E I YLK
Sbjct: 363 RGSVAITTTPGSNIKSHVMSERRRREKLNEMFLILKSLLPSVRKVDKASILAETITYLKV 422
Query: 378 LQLQVQ 383
L+ +V+
Sbjct: 423 LEKRVK 428
>TAIR|locus:2065086 [details] [associations]
symbol:AT2G40200 "AT2G40200" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AF085279 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488586 EMBL:BT029997 EMBL:BT030051
IPI:IPI00547467 PIR:E84826 RefSeq:NP_181549.1 UniGene:At.37090
ProteinModelPortal:Q9XEF0 SMR:Q9XEF0 EnsemblPlants:AT2G40200.1
GeneID:818611 KEGG:ath:AT2G40200 TAIR:At2g40200 eggNOG:NOG318931
HOGENOM:HOG000095217 InParanoid:Q9XEF0 OMA:QPETISD PhylomeDB:Q9XEF0
ProtClustDB:CLSN2913057 ArrayExpress:Q9XEF0 Genevestigator:Q9XEF0
Uniprot:Q9XEF0
Length = 254
Score = 122 (48.0 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 24/54 (44%), Positives = 36/54 (66%)
Query: 326 KRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 379
K + H L+E+RRRDRIN + AL++L+P +K DKA++L IE +K L+
Sbjct: 59 KAESLSRSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELK 112
>UNIPROTKB|Q5TKP7 [details] [associations]
symbol:OJ1362_G11.11 "Putative uncharacterized protein
OJ1362_G11.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC104713 ProteinModelPortal:Q5TKP7
EnsemblPlants:LOC_Os05g46370.1 KEGG:dosa:Os05t0541400-00
Gramene:Q5TKP7 HOGENOM:HOG000238211 Uniprot:Q5TKP7
Length = 416
Score = 126 (49.4 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 25/62 (40%), Positives = 44/62 (70%)
Query: 330 AAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM-SMG 388
+++ ++ R RR+R++E++R LQ L+P +K D A+MLDEA YLK L+ Q++ + ++G
Sbjct: 304 SSDPQTVAARLRRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEALETLG 363
Query: 389 CG 390
G
Sbjct: 364 NG 365
>UNIPROTKB|Q7F7Z2 [details] [associations]
symbol:Os01g0159800 "ESTs C26093(C11622)" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:CM000138 OMA:QPETISD ProtClustDB:CLSN2691085 EMBL:AP002539
RefSeq:NP_001042087.1 UniGene:Os.1443
EnsemblPlants:LOC_Os01g06640.1 EnsemblPlants:LOC_Os01g06640.2
GeneID:4324065 KEGG:osa:4324065 Uniprot:Q7F7Z2
Length = 258
Score = 121 (47.7 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 25/62 (40%), Positives = 41/62 (66%)
Query: 319 SRGS-TSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKS 377
S GS SA +RA ++H+ +ERRRR+RIN + L+ +IP + DKA++L ++ +K
Sbjct: 53 SSGSGRSATEARALKIHSEAERRRRERINAHLTTLRRMIPDTKQMDKATLLARVVDQVKD 112
Query: 378 LQ 379
L+
Sbjct: 113 LK 114
>TAIR|locus:2130619 [details] [associations]
symbol:AT4G16430 "AT4G16430" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:Z97341 EMBL:AL161544
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251688 EMBL:AF428368
EMBL:AY057626 EMBL:BT002301 IPI:IPI00546344 PIR:A71431
RefSeq:NP_193376.1 UniGene:At.33082 UniGene:At.4413
ProteinModelPortal:O23487 SMR:O23487 STRING:O23487 PaxDb:O23487
PRIDE:O23487 EnsemblPlants:AT4G16430.1 GeneID:827337
KEGG:ath:AT4G16430 TAIR:At4g16430 eggNOG:NOG246663
InParanoid:O23487 OMA:RSMSINF PhylomeDB:O23487
ProtClustDB:CLSN2685658 Genevestigator:O23487 Uniprot:O23487
Length = 467
Score = 125 (49.1 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 27/80 (33%), Positives = 49/80 (61%)
Query: 306 EDVELESADAKK-QSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDK 364
+D L D +K + RG A A H +ER+RR+++N++ AL+ ++P +K DK
Sbjct: 292 KDETLYLTDEQKPRKRGRKPANGREEALNHVEAERQRREKLNQRFYALRAVVPNISKMDK 351
Query: 365 ASMLDEAIEYLKSLQLQVQM 384
AS+L +AI Y+ +Q ++++
Sbjct: 352 ASLLADAITYITDMQKKIRV 371
>TAIR|locus:2155725 [details] [associations]
symbol:bHLH093 "AT5G65640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB026639 HOGENOM:HOG000029066 EMBL:AF488621 EMBL:BT025665
EMBL:AK229018 EMBL:AY085134 IPI:IPI00533579 IPI:IPI00785991
RefSeq:NP_001078801.1 RefSeq:NP_569014.1 UniGene:At.28897
ProteinModelPortal:Q9LSL1 SMR:Q9LSL1 EnsemblPlants:AT5G65640.1
GeneID:836690 KEGG:ath:AT5G65640 TAIR:At5g65640 eggNOG:NOG245311
InParanoid:Q9LSL1 OMA:PLMESDQ PhylomeDB:Q9LSL1
ProtClustDB:CLSN2686406 Genevestigator:Q9LSL1 Uniprot:Q9LSL1
Length = 351
Score = 123 (48.4 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 25/62 (40%), Positives = 43/62 (69%)
Query: 321 GSTSAKRSRAAEVH---NL-SERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLK 376
G T+ K+S+ E NL +ERRRR R+N+++ L+ ++P+ +K D+ S+L +AI+Y+K
Sbjct: 162 GETNKKKSKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMK 221
Query: 377 SL 378
L
Sbjct: 222 EL 223
>UNIPROTKB|Q84R60 [details] [associations]
symbol:OSJNBb0113I20.8 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R60 Gramene:Q84R60
Uniprot:Q84R60
Length = 353
Score = 123 (48.4 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 23/59 (38%), Positives = 40/59 (67%)
Query: 321 GSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 379
GS S+ + A+ H ++ER+RR++IN++ L +IP K DKA++L +A+ Y+K +Q
Sbjct: 180 GSGSSSAAPYAQEHIIAERKRREKINQRFIELSTVIPGLKKMDKATILSDAVRYVKEMQ 238
>UNIPROTKB|Q657D1 [details] [associations]
symbol:P0697C12.40 "BHLH transcription-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003141
EMBL:AP003296 Uniprot:Q657D1
Length = 484
Score = 125 (49.1 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 24/54 (44%), Positives = 40/54 (74%)
Query: 330 AAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQ 383
+++ ++ R+RR+RI+E++R LQ+L+P K D ASMLDEA YL+ L+ Q++
Sbjct: 371 SSDPQTVAARQRRERISERLRVLQKLVPGGAKMDTASMLDEAANYLRFLKSQIR 424
>TAIR|locus:2178555 [details] [associations]
symbol:MYC3 "AT5G46760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0006952 GO:GO:0009753 GO:GO:0003677
GO:GO:0009718 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251690 IPI:IPI00533290
RefSeq:NP_199488.1 UniGene:At.28315 ProteinModelPortal:Q9FIP9
SMR:Q9FIP9 DIP:DIP-58585N PaxDb:Q9FIP9 PRIDE:Q9FIP9
EnsemblPlants:AT5G46760.1 GeneID:834719 KEGG:ath:AT5G46760
TAIR:At5g46760 eggNOG:NOG295658 InParanoid:Q9FIP9 OMA:TASSIEM
PhylomeDB:Q9FIP9 ProtClustDB:CLSN2686023 Genevestigator:Q9FIP9
Uniprot:Q9FIP9
Length = 592
Score = 126 (49.4 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 25/78 (32%), Positives = 47/78 (60%)
Query: 306 EDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKA 365
E + +E + K + RG A H +ER+RR+++N++ +L+ ++P +K DKA
Sbjct: 388 EAIVVEPPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKA 447
Query: 366 SMLDEAIEYLKSLQLQVQ 383
S+L +AI Y+ L+ ++Q
Sbjct: 448 SLLGDAISYINELKSKLQ 465
>UNIPROTKB|Q5MP56 [details] [associations]
symbol:BA1 "Uncharacterized protein" species:4577 "Zea
mays" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AY683001 EMBL:AY683002
EMBL:BT062649 RefSeq:NP_001105271.1 UniGene:Zm.18382 IntAct:Q5MP56
GeneID:542186 KEGG:zma:542186 HOGENOM:HOG000238432 OMA:MLEQAIH
Uniprot:Q5MP56
Length = 219
Score = 118 (46.6 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 25/74 (33%), Positives = 46/74 (62%)
Query: 314 DAKKQSRGSTSAKRSRA---AEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDE 370
D++ + GS + +R A + +++ R RR RI+++ R L+ L+P +K D SML++
Sbjct: 34 DSRVRGGGSGARRRPGAKLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQ 93
Query: 371 AIEYLKSLQLQVQM 384
AI Y+K L+ Q+ +
Sbjct: 94 AIHYVKFLKTQISL 107
>ZFIN|ZDB-GENE-000509-1 [details] [associations]
symbol:arntl1a "aryl hydrocarbon receptor nuclear
translocator-like 1a" species:7955 "Danio rerio" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=NAS] [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IGI;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0009648 "photoperiodism" evidence=IEP]
[GO:0007623 "circadian rhythm" evidence=IGI] [GO:0009416 "response
to light stimulus" evidence=IGI] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 ZFIN:ZDB-GENE-000509-1
GO:GO:0005737 GO:GO:0045892 GO:GO:0045893 GO:GO:0003677
GO:GO:0007623 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 HOVERGEN:HBG107503 KO:K02296 OMA:EKINTNC GO:GO:0009648
EMBL:CR759966 EMBL:AF144689 EMBL:AF144690 IPI:IPI00490446
RefSeq:NP_571652.1 UniGene:Dr.75458 DIP:DIP-46453N STRING:Q9I879
Ensembl:ENSDART00000023959 Ensembl:ENSDART00000148660 GeneID:58098
KEGG:dre:58098 CTD:58098 InParanoid:Q9I879 NextBio:20892352
Uniprot:Q9I879
Length = 626
Score = 126 (49.4 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 31/95 (32%), Positives = 52/95 (54%)
Query: 291 DRKRKGRETDDEYH--SEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEK 348
+RKRKG T+ + S D +++ K R + A E H+ E+RRRD++N
Sbjct: 36 NRKRKGSTTEYQIDGFSFDDSMDTDKDKTLGRDEQQGRIKNAREAHSQIEKRRRDKMNSF 95
Query: 349 MRALQELIPRCN----KSDKASMLDEAIEYLKSLQ 379
+ L L+P CN K DK ++L A++++K+L+
Sbjct: 96 IDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 130
>UNIPROTKB|Q69JI7 [details] [associations]
symbol:OSJNBa0026C08.39-1 "BHLH protein family-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008215 EMBL:CM000146 EMBL:EU837261 EMBL:AP006169
EMBL:AP005759 RefSeq:NP_001063459.1 UniGene:Os.16741
EnsemblPlants:LOC_Os09g29930.1 GeneID:4347359 KEGG:osa:4347359
OMA:HNIVTSA ProtClustDB:CLSN2697427 Uniprot:Q69JI7
Length = 504
Score = 124 (48.7 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 27/66 (40%), Positives = 42/66 (63%)
Query: 319 SRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCN-KSDKASMLDEAIEYLKS 377
S T + S H+ +E+RRR +IN++ + L+EL+P + K DKA+ L E IEY++
Sbjct: 207 SGSGTDQRPSSPRSKHSATEQRRRSKINDRFQILRELLPHSDQKRDKATFLLEVIEYIRF 266
Query: 378 LQLQVQ 383
LQ +VQ
Sbjct: 267 LQEKVQ 272
>MGI|MGI:96921 [details] [associations]
symbol:Max "Max protein" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO;IGI] [GO:0006461 "protein complex
assembly" evidence=ISO] [GO:0010629 "negative regulation of gene
expression" evidence=ISO] [GO:0016605 "PML body" evidence=ISO]
[GO:0030425 "dendrite" evidence=ISO] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0046982 "protein heterodimerization activity"
evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
MGI:MGI:96921 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0071339 HOVERGEN:HBG008542
eggNOG:NOG239807 HOGENOM:HOG000293257 ChiTaRS:MAX EMBL:M63903
IPI:IPI00310962 PIR:A38488 UniGene:Mm.268548 PDB:1A93 PDB:2A93
PDB:3U5V PDBsum:1A93 PDBsum:2A93 PDBsum:3U5V
ProteinModelPortal:P28574 SMR:P28574 DIP:DIP-116N IntAct:P28574
STRING:P28574 PhosphoSite:P28574 PaxDb:P28574 PRIDE:P28574
InParanoid:P28574 EvolutionaryTrace:P28574 CleanEx:MM_MAX
Genevestigator:P28574 GermOnline:ENSMUSG00000059436 Uniprot:P28574
Length = 160
Score = 110 (43.8 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 26/77 (33%), Positives = 50/77 (64%)
Query: 305 SEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCN--KS 362
++D+E+ES + +Q+R ++A + RA HN ER+RRD I + +L++ +P K+
Sbjct: 4 NDDIEVESDE--EQARFQSAADK-RAH--HNALERKRRDHIKDSFHSLRDSVPSLQGEKA 58
Query: 363 DKASMLDEAIEYLKSLQ 379
+A +LD+A EY++ ++
Sbjct: 59 SRAQILDKATEYIQYMR 75
>TAIR|locus:2123954 [details] [associations]
symbol:AT4G29930 "AT4G29930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161575 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AK117730 EMBL:BT005869 EMBL:AY568654
EMBL:AJ630482 EMBL:AK176201 EMBL:AK176276 EMBL:AK176674
EMBL:AK222212 EMBL:AK228201 EMBL:AF488569 IPI:IPI00516806
IPI:IPI00544272 IPI:IPI00546879 IPI:IPI00892082
RefSeq:NP_001031752.1 RefSeq:NP_001078471.1 RefSeq:NP_001119080.1
RefSeq:NP_194722.2 UniGene:At.44068 ProteinModelPortal:Q700E3
SMR:Q700E3 IntAct:Q700E3 EnsemblPlants:AT4G29930.3 GeneID:829116
KEGG:ath:AT4G29930 TAIR:At4g29930 eggNOG:NOG294060
HOGENOM:HOG000006429 InParanoid:Q8GYC3 OMA:PIENIGE PhylomeDB:Q700E3
ProtClustDB:CLSN2680169 Genevestigator:Q700E3 Uniprot:Q700E3
Length = 263
Score = 119 (46.9 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 25/77 (32%), Positives = 48/77 (62%)
Query: 302 EYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK 361
E+ S +E E+ +S A S A+ + +SER RR ++N+++ AL+ ++P +K
Sbjct: 24 EFDSWPME-EAFSGSGESSSPDGAATSPASSKNVVSERNRRQKLNQRLFALRSVVPNISK 82
Query: 362 SDKASMLDEAIEYLKSL 378
DKAS++ ++I+Y++ L
Sbjct: 83 LDKASVIKDSIDYMQEL 99
>TAIR|locus:505006103 [details] [associations]
symbol:AT1G05805 "AT1G05805" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC009999 HOGENOM:HOG000242890 EMBL:BT000954 EMBL:AY086106
IPI:IPI00516925 PIR:F86192 RefSeq:NP_563749.1 UniGene:At.11933
ProteinModelPortal:Q8H102 SMR:Q8H102 IntAct:Q8H102 STRING:Q8H102
PaxDb:Q8H102 PRIDE:Q8H102 EnsemblPlants:AT1G05805.1 GeneID:837090
KEGG:ath:AT1G05805 TAIR:At1g05805 eggNOG:NOG249421
InParanoid:Q8H102 OMA:NEVNETP PhylomeDB:Q8H102
ProtClustDB:CLSN2687697 Genevestigator:Q8H102 Uniprot:Q8H102
Length = 362
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 26/60 (43%), Positives = 40/60 (66%)
Query: 325 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKAS-MLDEAIEYLKSLQLQVQ 383
AKR A +++ER RR RI+ K++ LQ+L+P +K S MLD A++++K LQ Q+Q
Sbjct: 285 AKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQLQ 344
>UNIPROTKB|Q8H8E4 [details] [associations]
symbol:OJ1006F06.1 "Putative bHLH transcription protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000029066 EMBL:AC099399 ProteinModelPortal:Q8H8E4
STRING:Q8H8E4 Gramene:Q8H8E4 Uniprot:Q8H8E4
Length = 430
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 20/58 (34%), Positives = 40/58 (68%)
Query: 336 LSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVP 393
++ERRRR R+N+++ L+ ++P+ +K D+ S+L + I+Y+K L +++ + GV P
Sbjct: 185 MAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYVKELTERIKTLEEEIGVTP 242
>UNIPROTKB|Q6ZBQ2 [details] [associations]
symbol:P0605H02.26 "BHLH protein family-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 ProtClustDB:CLSN2697427 EMBL:HQ858865 EMBL:AP004620
EMBL:AK100183 RefSeq:NP_001062109.1 UniGene:Os.5093 STRING:Q6ZBQ2
EnsemblPlants:LOC_Os08g38210.1 GeneID:4345899 KEGG:osa:4345899
OMA:KPTHDFL Uniprot:Q6ZBQ2
Length = 508
Score = 123 (48.4 bits), Expect = 0.00012, P = 0.00012
Identities = 30/95 (31%), Positives = 47/95 (49%)
Query: 290 EDRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKM 349
+D RE V +E T + H+ +E+RRR +IN++
Sbjct: 182 DDGHAARREVSSSLKELTVRVEGKGGSCSGSAGTDQMPNTPRSKHSATEQRRRSKINDRF 241
Query: 350 RALQELIPRCN-KSDKASMLDEAIEYLKSLQLQVQ 383
+ L++L+P + K DKAS L E IEY++ LQ +VQ
Sbjct: 242 QLLRDLLPHNDQKRDKASFLLEVIEYIRFLQEKVQ 276
>UNIPROTKB|Q336P5 [details] [associations]
symbol:Os10g0575000 "Os10g0575000 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 eggNOG:NOG295658 KO:K13422 RefSeq:NP_001065478.1
UniGene:Os.100484 STRING:Q336P5 GeneID:4349484 KEGG:osa:4349484
ProtClustDB:CLSN2698296 Uniprot:Q336P5
Length = 699
Score = 117 (46.2 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 23/67 (34%), Positives = 41/67 (61%)
Query: 313 ADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAI 372
A+ + + RG A H +ER+RR+++N++ AL+ ++P +K DKAS+L +AI
Sbjct: 504 AEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAI 563
Query: 373 EYLKSLQ 379
Y+ L+
Sbjct: 564 SYINELR 570
Score = 51 (23.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 190 PSNSKSVTIRESTVVDSSDTP---APGPDSRASEAMRSMEGASGVNNNN 235
P+ + S+T ++ S TP A D++++ RSME S +N N
Sbjct: 399 PAATASLTTAPGSLF-SQHTPTLTAAANDAKSNNQKRSMEATSRASNTN 446
>UNIPROTKB|F8W6J9 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9606 "Homo sapiens"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC016884
EMBL:AC022878 IPI:IPI00217732 HGNC:HGNC:701
ProteinModelPortal:F8W6J9 SMR:F8W6J9 Ensembl:ENST00000389708
ArrayExpress:F8W6J9 Bgee:F8W6J9 Uniprot:F8W6J9
Length = 526
Score = 123 (48.4 bits), Expect = 0.00012, P = 0.00012
Identities = 31/94 (32%), Positives = 53/94 (56%)
Query: 291 DRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSR-AAEVHNLSERRRRDRINEKM 349
+RKRKG TD + E ++ + D + + R + A E H+ E+RRRD++N +
Sbjct: 36 NRKRKGSSTD---YQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFI 92
Query: 350 RALQELIPRCN----KSDKASMLDEAIEYLKSLQ 379
L L+P CN K DK ++L A++++K+L+
Sbjct: 93 DELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
>UNIPROTKB|H0Y5R1 [details] [associations]
symbol:ARNTL2 "Aryl hydrocarbon receptor nuclear
translocator-like protein 2" species:9606 "Homo sapiens"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC068794
EMBL:AC092829 HGNC:HGNC:18984 Ensembl:ENST00000457040
Uniprot:H0Y5R1
Length = 588
Score = 123 (48.4 bits), Expect = 0.00014, P = 0.00014
Identities = 33/92 (35%), Positives = 54/92 (58%)
Query: 292 RKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRA 351
RKRKG ++D + + L S +R SA S + E H+ +E+RRRD++N +
Sbjct: 29 RKRKGSDSDPSHQNPLTYLLS------TRIEISAS-SGSREAHSQTEKRRRDKMNNLIEE 81
Query: 352 LQELIPRCN----KSDKASMLDEAIEYLKSLQ 379
L +IP+CN K DK ++L A+++L+SL+
Sbjct: 82 LSAMIPQCNPMARKLDKLTVLRMAVQHLRSLK 113
>UNIPROTKB|Q58GE3 [details] [associations]
symbol:UDT1 "Undeveloped tapetum 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0048656 "tapetal layer formation" evidence=IMP] [GO:0048658
"tapetal layer development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048656 EMBL:AY953870
STRING:Q58GE3 KEGG:dosa:Os07t0549600-01 Gramene:Q58GE3
HOGENOM:HOG000084429 Uniprot:Q58GE3
Length = 234
Score = 116 (45.9 bits), Expect = 0.00015, P = 0.00015
Identities = 26/84 (30%), Positives = 49/84 (58%)
Query: 311 ESADAKKQSRGSTSAKRSRAAEVHNL-SERRRRDRINEKMRALQELIPRCNKSDKASMLD 369
+ + ++Q + + +A + + NL +ERRRR R+N + AL+ ++P+ K K + L
Sbjct: 42 DDGEEEQQQQQAAAAAMGKEFKSKNLEAERRRRGRLNGNIFALRAVVPKITKMSKEATLS 101
Query: 370 EAIEYLKSLQLQVQMMSMGCGVVP 393
+AIE++K+LQ +V + G P
Sbjct: 102 DAIEHIKNLQNEVLELQRQLGDSP 125
>UNIPROTKB|Q5R4T2 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9601 "Pongo abelii"
[GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0032922 "circadian regulation of gene expression"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0006355
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 GO:GO:0032922 SMART:SM00086 TIGRFAMs:TIGR00229
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956 CTD:406
HOVERGEN:HBG107503 KO:K02296 EMBL:CR861161 RefSeq:NP_001126900.1
UniGene:Pab.3880 ProteinModelPortal:Q5R4T2 GeneID:100173916
KEGG:pon:100173916 Uniprot:Q5R4T2
Length = 625
Score = 123 (48.4 bits), Expect = 0.00016, P = 0.00016
Identities = 31/94 (32%), Positives = 53/94 (56%)
Query: 291 DRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSR-AAEVHNLSERRRRDRINEKM 349
+RKRKG TD + E ++ + D + + R + A E H+ E+RRRD++N +
Sbjct: 36 NRKRKGSSTD---YQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFI 92
Query: 350 RALQELIPRCN----KSDKASMLDEAIEYLKSLQ 379
L L+P CN K DK ++L A++++K+L+
Sbjct: 93 DELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
>UNIPROTKB|Q6Z1F9 [details] [associations]
symbol:OSJNBa0033D24.39 "BHLH transcription factor-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 GO:GO:0005634
EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP005439
EMBL:AP004464 RefSeq:NP_001062365.1 UniGene:Os.89290 GeneID:4346166
KEGG:osa:4346166 Uniprot:Q6Z1F9
Length = 143
Score = 103 (41.3 bits), Expect = 0.00016, P = 0.00016
Identities = 23/50 (46%), Positives = 35/50 (70%)
Query: 349 MRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSMG-CGVVPMMF 396
MR LQ L+P C+K + KA +LDE I Y++SLQ QV+ +SM + P+++
Sbjct: 1 MRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASMSPVLY 50
>UNIPROTKB|E1BLF5 [details] [associations]
symbol:ARNTL "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0043425 "bHLH transcription factor binding" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
[GO:0032922 "circadian regulation of gene expression" evidence=IEA]
[GO:0017162 "aryl hydrocarbon receptor binding" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0001190 "RNA polymerase II transcription factor
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0000982 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0000060
"protein import into nucleus, translocation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0007623 GO:GO:0005667 GO:GO:0000060 GO:GO:0004871
GO:GO:0000982 SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0001190
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0042176 CTD:406 KO:K02296 OMA:EKINTNC EMBL:DAAA02040648
IPI:IPI00712443 RefSeq:NP_001178099.1 UniGene:Bt.39079 PRIDE:E1BLF5
Ensembl:ENSBTAT00000017323 GeneID:530705 KEGG:bta:530705
NextBio:20875311 Uniprot:E1BLF5
Length = 626
Score = 123 (48.4 bits), Expect = 0.00016, P = 0.00016
Identities = 31/94 (32%), Positives = 53/94 (56%)
Query: 291 DRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSR-AAEVHNLSERRRRDRINEKM 349
+RKRKG TD + E ++ + D + + R + A E H+ E+RRRD++N +
Sbjct: 36 NRKRKGSSTD---YQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFI 92
Query: 350 RALQELIPRCN----KSDKASMLDEAIEYLKSLQ 379
L L+P CN K DK ++L A++++K+L+
Sbjct: 93 DELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
>UNIPROTKB|O00327 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000060 "protein import into nucleus,
translocation" evidence=IEA] [GO:0001190 "RNA polymerase II
transcription factor binding transcription factor activity involved
in positive regulation of transcription" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0043425 "bHLH transcription
factor binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0007623 "circadian
rhythm" evidence=TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0032922 "circadian regulation of
gene expression" evidence=ISS] [GO:0003677 "DNA binding"
evidence=IGI] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IDA] [GO:0017162
"aryl hydrocarbon receptor binding" evidence=IPI] [GO:0051879
"Hsp90 protein binding" evidence=IDA] [GO:0000982 "RNA polymerase
II core promoter proximal region sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005737
EMBL:CH471064 GO:GO:0003677 GO:GO:0045944 GO:GO:0005667
GO:GO:0000060 GO:GO:0004871 GO:GO:0000982 GO:GO:0032922
SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0001190 eggNOG:NOG293303
HOGENOM:HOG000234379 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0051879 GO:GO:0042176 Pathway_Interaction_DB:circadianpathway
Reactome:REACT_24941 CTD:406 HOVERGEN:HBG107503 KO:K02296
OMA:EKINTNC OrthoDB:EOG4NS3B2 EMBL:D89722 EMBL:AB000812
EMBL:AB000813 EMBL:AB000814 EMBL:AB000815 EMBL:AB000816 EMBL:U51627
EMBL:U60415 EMBL:AF044288 EMBL:AK095749 EMBL:AK291510 EMBL:EF015894
EMBL:AC016884 EMBL:AC022878 EMBL:BC016674 EMBL:BC031214
EMBL:BC041129 IPI:IPI00217732 IPI:IPI00217734 IPI:IPI00217735
IPI:IPI00217736 IPI:IPI00412162 IPI:IPI00413132 IPI:IPI00783543
IPI:IPI00879656 IPI:IPI00910251 PIR:JC5405 PIR:JC5407 PIR:PC4288
PIR:PC4289 RefSeq:NP_001025443.1 RefSeq:NP_001025444.1
RefSeq:NP_001169.3 UniGene:Hs.65734 PDB:4H10 PDBsum:4H10
ProteinModelPortal:O00327 SMR:O00327 IntAct:O00327 STRING:O00327
PhosphoSite:O00327 PaxDb:O00327 PRIDE:O00327 DNASU:406
Ensembl:ENST00000361003 Ensembl:ENST00000389707
Ensembl:ENST00000396441 Ensembl:ENST00000401424
Ensembl:ENST00000403290 Ensembl:ENST00000403482
Ensembl:ENST00000403510 GeneID:406 KEGG:hsa:406 UCSC:uc001mkp.3
UCSC:uc001mkr.3 UCSC:uc001mks.3 UCSC:uc001mkx.3 UCSC:uc009ygm.1
GeneCards:GC11P013299 HGNC:HGNC:701 MIM:602550 neXtProt:NX_O00327
PharmGKB:PA24996 InParanoid:O00327 GenomeRNAi:406 NextBio:1701
ArrayExpress:O00327 Bgee:O00327 Genevestigator:O00327
GermOnline:ENSG00000133794 Uniprot:O00327
Length = 626
Score = 123 (48.4 bits), Expect = 0.00016, P = 0.00016
Identities = 31/94 (32%), Positives = 53/94 (56%)
Query: 291 DRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSR-AAEVHNLSERRRRDRINEKM 349
+RKRKG TD + E ++ + D + + R + A E H+ E+RRRD++N +
Sbjct: 36 NRKRKGSSTD---YQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFI 92
Query: 350 RALQELIPRCN----KSDKASMLDEAIEYLKSLQ 379
L L+P CN K DK ++L A++++K+L+
Sbjct: 93 DELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
>UNIPROTKB|A0MLS5 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9796 "Equus caballus"
[GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0032922 "circadian regulation of gene expression"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0006355
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 GO:GO:0032922 SMART:SM00086 TIGRFAMs:TIGR00229
eggNOG:NOG293303 HOGENOM:HOG000234379 Gene3D:4.10.280.10
SUPFAM:SSF47459 CTD:406 HOVERGEN:HBG107503 KO:K02296
OrthoDB:EOG4NS3B2 EMBL:DQ988038 RefSeq:NP_001075390.1
UniGene:Eca.2805 ProteinModelPortal:A0MLS5 STRING:A0MLS5
GeneID:100034115 KEGG:ecb:100034115 InParanoid:A0MLS5
Uniprot:A0MLS5
Length = 626
Score = 123 (48.4 bits), Expect = 0.00016, P = 0.00016
Identities = 31/94 (32%), Positives = 53/94 (56%)
Query: 291 DRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSR-AAEVHNLSERRRRDRINEKM 349
+RKRKG TD + E ++ + D + + R + A E H+ E+RRRD++N +
Sbjct: 36 NRKRKGSSTD---YQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFI 92
Query: 350 RALQELIPRCN----KSDKASMLDEAIEYLKSLQ 379
L L+P CN K DK ++L A++++K+L+
Sbjct: 93 DELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
>UNIPROTKB|Q91YA9 [details] [associations]
symbol:Arntl "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:1026970 "Nannospalax galili"
[GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0032922 "circadian regulation of gene expression"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 EMBL:AJ318060 GO:GO:0005737
GO:GO:0006355 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0004871 GO:GO:0032922 SMART:SM00086
TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
HOVERGEN:HBG107503 ProteinModelPortal:Q91YA9 Uniprot:Q91YA9
Length = 626
Score = 123 (48.4 bits), Expect = 0.00016, P = 0.00016
Identities = 31/94 (32%), Positives = 53/94 (56%)
Query: 291 DRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSR-AAEVHNLSERRRRDRINEKM 349
+RKRKG TD + E ++ + D + + R + A E H+ E+RRRD++N +
Sbjct: 36 NRKRKGSSTD---YQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFI 92
Query: 350 RALQELIPRCN----KSDKASMLDEAIEYLKSLQ 379
L L+P CN K DK ++L A++++K+L+
Sbjct: 93 DELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
>MGI|MGI:1096381 [details] [associations]
symbol:Arntl "aryl hydrocarbon receptor nuclear
translocator-like" species:10090 "Mus musculus" [GO:0000060
"protein import into nucleus, translocation" evidence=IDA]
[GO:0000982 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IC]
[GO:0001190 "RNA polymerase II transcription factor binding
transcription factor activity involved in positive regulation of
transcription" evidence=IDA] [GO:0003677 "DNA binding"
evidence=ISO;IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISA;IDA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005667 "transcription factor complex" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISA;IDA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IDA;IMP] [GO:0008134 "transcription factor binding"
evidence=ISA] [GO:0016604 "nuclear body" evidence=IDA] [GO:0017162
"aryl hydrocarbon receptor binding" evidence=ISO] [GO:0032922
"circadian regulation of gene expression" evidence=IDA] [GO:0042176
"regulation of protein catabolic process" evidence=IDA] [GO:0043425
"bHLH transcription factor binding" evidence=IPI] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IGI;IC;ISO;IDA] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=ISO]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
MGI:MGI:1096381 GO:GO:0005829 GO:GO:0003677 GO:GO:0005667
GO:GO:0001077 GO:GO:0000060 GO:GO:0004871 GO:GO:0032922
SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0001190 eggNOG:NOG293303
GeneTree:ENSGT00650000092935 HOGENOM:HOG000234379
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0008134 GO:GO:0042176
GO:GO:0016604 Reactome:REACT_109335 Reactome:REACT_24972 CTD:406
HOVERGEN:HBG107503 KO:K02296 OMA:EKINTNC OrthoDB:EOG4NS3B2
EMBL:AB012601 EMBL:AB015203 EMBL:AB012602 EMBL:AB014494
EMBL:BC025973 EMBL:BC011080 IPI:IPI00403502 IPI:IPI00462286
IPI:IPI00474434 IPI:IPI00474567 IPI:IPI00875930 PIR:JE0270
RefSeq:NP_001229977.1 RefSeq:NP_031515.1 UniGene:Mm.440371 PDB:4F3L
PDBsum:4F3L ProteinModelPortal:Q9WTL8 SMR:Q9WTL8 DIP:DIP-43977N
IntAct:Q9WTL8 MINT:MINT-1657344 STRING:Q9WTL8 PhosphoSite:Q9WTL8
PaxDb:Q9WTL8 PRIDE:Q9WTL8 Ensembl:ENSMUST00000047321 GeneID:11865
KEGG:mmu:11865 UCSC:uc009jhf.1 UCSC:uc009jhi.1 UCSC:uc009jhj.1
InParanoid:Q9WTL8 NextBio:279875 Bgee:Q9WTL8 Genevestigator:Q9WTL8
GermOnline:ENSMUSG00000055116 Uniprot:Q9WTL8
Length = 632
Score = 123 (48.4 bits), Expect = 0.00016, P = 0.00016
Identities = 36/100 (36%), Positives = 54/100 (54%)
Query: 291 DRKRKGRETDDEYHSEDVELE-SADAKKQS---RGSTSAKRSR---AAEVHNLSERRRRD 343
+RKRKG TD Y +D E S D K R + + R A E H+ E+RRRD
Sbjct: 36 NRKRKGSATD--YQLDDFAFEESMDTDKDDPHGRLEYAEHQGRIKNAREAHSQIEKRRRD 93
Query: 344 RINEKMRALQELIPRCN----KSDKASMLDEAIEYLKSLQ 379
++N + L L+P CN K DK ++L A++++K+L+
Sbjct: 94 KMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 133
>UNIPROTKB|Q6YUS3 [details] [associations]
symbol:OSJNBb0088N06.15 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] [GO:0048653
"anther development" evidence=IMP] [GO:0048654 "anther
morphogenesis" evidence=IMP] [GO:0048657 "tapetal cell
differentiation" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG313389
HOGENOM:HOG000033929 OMA:PRTKSCE EMBL:AP008208 EMBL:CM000139
GO:GO:0048657 EMBL:AP004078 EMBL:AP005851 RefSeq:NP_001045710.1
UniGene:Os.50000 EnsemblPlants:LOC_Os02g02820.1 GeneID:4328113
KEGG:osa:4328113 ProtClustDB:CLSN2692391 Uniprot:Q6YUS3
Length = 552
Score = 122 (48.0 bits), Expect = 0.00017, P = 0.00017
Identities = 28/83 (33%), Positives = 47/83 (56%)
Query: 302 EYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNL-SERRRRDRINEKMRALQELIPRCN 360
E SE +L D + G + ++ + NL +ER+RR ++N + L+ L+P
Sbjct: 253 ESGSEGRKLHGGDPEDDGDGEGRSGGAKRQQCKNLEAERKRRKKLNGHLYKLRSLVPNIT 312
Query: 361 KSDKASMLDEAIEYLKSLQLQVQ 383
K D+AS+L +AI+Y+ LQ QV+
Sbjct: 313 KMDRASILGDAIDYIVGLQKQVK 335
>UNIPROTKB|P52162 [details] [associations]
symbol:MAX "Protein max" species:9031 "Gallus gallus"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0071339 "MLL1
complex" evidence=ISS] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0071339
EMBL:L12469 IPI:IPI00572244 IPI:IPI00576758 PIR:I50379
ProteinModelPortal:P52162 SMR:P52162 MINT:MINT-1367457
HOVERGEN:HBG008542 ChEMBL:CHEMBL1613747 Uniprot:P52162
Length = 160
Score = 108 (43.1 bits), Expect = 0.00019, P = 0.00019
Identities = 26/77 (33%), Positives = 49/77 (63%)
Query: 305 SEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCN--KS 362
++D+E+ES + +Q R ++A + RA HN ER+RRD I + +L++ +P K+
Sbjct: 4 NDDIEVESDE--EQPRFQSAADK-RAH--HNALERKRRDHIKDSFHSLRDSVPSLQGEKA 58
Query: 363 DKASMLDEAIEYLKSLQ 379
+A +LD+A EY++ ++
Sbjct: 59 SRAQILDKATEYIQYMR 75
>UNIPROTKB|E2QZS2 [details] [associations]
symbol:MAX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071339 "MLL1 complex" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0006355
GO:GO:0003677 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0071339
CTD:4149 GeneTree:ENSGT00530000064011 KO:K04453 OMA:ANYSSSD
EMBL:AAEX03005789 RefSeq:XP_852901.1 ProteinModelPortal:E2QZS2
SMR:E2QZS2 PRIDE:E2QZS2 Ensembl:ENSCAFT00000025721 GeneID:609969
KEGG:cfa:609969 NextBio:20895543 Uniprot:E2QZS2
Length = 160
Score = 108 (43.1 bits), Expect = 0.00019, P = 0.00019
Identities = 26/77 (33%), Positives = 49/77 (63%)
Query: 305 SEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCN--KS 362
++D+E+ES + +Q R ++A + RA HN ER+RRD I + +L++ +P K+
Sbjct: 4 NDDIEVESDE--EQPRFQSAADK-RAH--HNALERKRRDHIKDSFHSLRDSVPSLQGEKA 58
Query: 363 DKASMLDEAIEYLKSLQ 379
+A +LD+A EY++ ++
Sbjct: 59 SRAQILDKATEYIQYMR 75
>UNIPROTKB|P61244 [details] [associations]
symbol:MAX "Protein max" species:9606 "Homo sapiens"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0009267 "cellular response to starvation"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0016605 "PML body" evidence=IEA] [GO:0030425
"dendrite" evidence=IEA] [GO:0032403 "protein complex binding"
evidence=IEA] [GO:0032868 "response to insulin stimulus"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0048678 "response to axon injury" evidence=IEA]
[GO:0051402 "neuron apoptotic process" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0071375
"cellular response to peptide hormone stimulus" evidence=IEA]
[GO:0071339 "MLL1 complex" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003712 "transcription cofactor
activity" evidence=TAS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005737
Pathway_Interaction_DB:telomerasepathway EMBL:CH471061
GO:GO:0006461 GO:GO:0016605 GO:GO:0030425 GO:GO:0043565
GO:GO:0051402 GO:GO:0048678 GO:GO:0003700 GO:GO:0032868
GO:GO:0003713 GO:GO:0006366 GO:GO:0060041 GO:GO:0009267
GO:GO:0010629 Gene3D:4.10.280.10 SUPFAM:SSF47459
Pathway_Interaction_DB:smad2_3nuclearpathway
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0071375
GO:GO:0071339 Orphanet:29072 EMBL:AL139022 PDB:1NLW PDBsum:1NLW
HOVERGEN:HBG008542 eggNOG:NOG239807 HOGENOM:HOG000293257 CTD:4149
KO:K04453 EMBL:M64240 EMBL:X66867 EMBL:X60287 EMBL:AK290130
EMBL:AK290929 EMBL:AK292189 EMBL:AK292630 EMBL:BC003525
EMBL:BC004516 EMBL:BC013669 EMBL:BC027924 IPI:IPI00018214
IPI:IPI00060723 IPI:IPI00157813 IPI:IPI00158128 IPI:IPI00219929
PIR:A38431 PIR:A42611 PIR:B38431 PIR:S33118 RefSeq:NP_001257997.1
RefSeq:NP_002373.3 RefSeq:NP_660087.1 RefSeq:NP_660088.1
RefSeq:NP_660089.1 RefSeq:NP_932061.1 UniGene:Hs.285354 PDB:1AN2
PDB:1HLO PDB:1NKP PDB:1R05 PDBsum:1AN2 PDBsum:1HLO PDBsum:1NKP
PDBsum:1R05 ProteinModelPortal:P61244 SMR:P61244 DIP:DIP-28145N
IntAct:P61244 MINT:MINT-257220 STRING:P61244 PhosphoSite:P61244
DMDM:47117704 PaxDb:P61244 PRIDE:P61244 DNASU:4149
Ensembl:ENST00000246163 Ensembl:ENST00000284165
Ensembl:ENST00000358402 Ensembl:ENST00000358664
Ensembl:ENST00000394606 Ensembl:ENST00000553928
Ensembl:ENST00000556979 GeneID:4149 KEGG:hsa:4149 UCSC:uc001xie.1
UCSC:uc001xif.1 UCSC:uc001xig.1 GeneCards:GC14M065472
HGNC:HGNC:6913 HPA:CAB000328 HPA:HPA003474 MIM:154950
neXtProt:NX_P61244 PharmGKB:PA30656 InParanoid:P61244 OMA:ANYSSSD
PhylomeDB:P61244 BindingDB:P61244 ChEMBL:CHEMBL1250363 ChiTaRS:MAX
EvolutionaryTrace:P61244 GenomeRNAi:4149 NextBio:16302
PMAP-CutDB:P61244 ArrayExpress:P61244 Bgee:P61244 CleanEx:HS_MAX
Genevestigator:P61244 GermOnline:ENSG00000125952 Uniprot:P61244
Length = 160
Score = 108 (43.1 bits), Expect = 0.00019, P = 0.00019
Identities = 26/77 (33%), Positives = 49/77 (63%)
Query: 305 SEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCN--KS 362
++D+E+ES + +Q R ++A + RA HN ER+RRD I + +L++ +P K+
Sbjct: 4 NDDIEVESDE--EQPRFQSAADK-RAH--HNALERKRRDHIKDSFHSLRDSVPSLQGEKA 58
Query: 363 DKASMLDEAIEYLKSLQ 379
+A +LD+A EY++ ++
Sbjct: 59 SRAQILDKATEYIQYMR 75
>UNIPROTKB|P61245 [details] [associations]
symbol:MAX "Protein max" species:9685 "Felis catus"
[GO:0071339 "MLL1 complex" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0071339 HOVERGEN:HBG008542 eggNOG:NOG239807
HOGENOM:HOG000293257 OrthoDB:EOG4VT5ZK CTD:4149
GeneTree:ENSGT00530000064011 EMBL:D37786 RefSeq:NP_001009866.1
ProteinModelPortal:P61245 SMR:P61245 STRING:P61245 PRIDE:P61245
Ensembl:ENSFCAT00000010350 GeneID:493947 KEGG:fca:493947
BindingDB:P61245 Uniprot:P61245
Length = 160
Score = 108 (43.1 bits), Expect = 0.00019, P = 0.00019
Identities = 26/77 (33%), Positives = 49/77 (63%)
Query: 305 SEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCN--KS 362
++D+E+ES + +Q R ++A + RA HN ER+RRD I + +L++ +P K+
Sbjct: 4 NDDIEVESDE--EQPRFQSAADK-RAH--HNALERKRRDHIKDSFHSLRDSVPSLQGEKA 58
Query: 363 DKASMLDEAIEYLKSLQ 379
+A +LD+A EY++ ++
Sbjct: 59 SRAQILDKATEYIQYMR 75
>RGD|621101 [details] [associations]
symbol:Max "MYC associated factor X" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO;IMP] [GO:0006461 "protein complex
assembly" evidence=IDA] [GO:0009267 "cellular response to
starvation" evidence=IEP] [GO:0010243 "response to organic
nitrogen" evidence=IEP] [GO:0010629 "negative regulation of gene
expression" evidence=IDA] [GO:0016605 "PML body" evidence=IDA]
[GO:0030425 "dendrite" evidence=IDA] [GO:0032403 "protein complex
binding" evidence=IDA] [GO:0032868 "response to insulin stimulus"
evidence=IEP] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0046982 "protein heterodimerization activity"
evidence=IDA;IPI] [GO:0048678 "response to axon injury"
evidence=IEP] [GO:0051402 "neuron apoptotic process" evidence=IEP]
[GO:0060041 "retina development in camera-type eye" evidence=IEP]
[GO:0071339 "MLL1 complex" evidence=ISO;ISS] [GO:0071375 "cellular
response to peptide hormone stimulus" evidence=IEP] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 RGD:621101 GO:GO:0005737
GO:GO:0042803 GO:GO:0006461 GO:GO:0032403 GO:GO:0016605
GO:GO:0030425 GO:GO:0043565 GO:GO:0051402 GO:GO:0048678
GO:GO:0003700 GO:GO:0006351 GO:GO:0032868 GO:GO:0060041
GO:GO:0009267 GO:GO:0010629 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0071375 GO:GO:0071339 HOVERGEN:HBG008542 eggNOG:NOG239807
HOGENOM:HOG000293257 OrthoDB:EOG4VT5ZK CTD:4149
GeneTree:ENSGT00530000064011 KO:K04453 EMBL:D14447 EMBL:D14448
IPI:IPI00203155 IPI:IPI00231990 PIR:S39792 RefSeq:NP_071546.1
UniGene:Rn.4210 ProteinModelPortal:P52164 SMR:P52164 IntAct:P52164
MINT:MINT-4508738 STRING:P52164 PhosphoSite:P52164
Ensembl:ENSRNOT00000010954 Ensembl:ENSRNOT00000041442 GeneID:60661
KEGG:rno:60661 UCSC:RGD:621101 NextBio:612359 ArrayExpress:P52164
Genevestigator:P52164 GermOnline:ENSRNOG00000008049 Uniprot:P52164
Length = 160
Score = 108 (43.1 bits), Expect = 0.00019, P = 0.00019
Identities = 26/77 (33%), Positives = 49/77 (63%)
Query: 305 SEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCN--KS 362
++D+E+ES + +Q R ++A + RA HN ER+RRD I + +L++ +P K+
Sbjct: 4 NDDIEVESDE--EQPRFQSAADK-RAH--HNALERKRRDHIKDSFHSLRDSVPSLQGEKA 58
Query: 363 DKASMLDEAIEYLKSLQ 379
+A +LD+A EY++ ++
Sbjct: 59 SRAQILDKATEYIQYMR 75
>TAIR|locus:2035609 [details] [associations]
symbol:MYC2 "AT1G32640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009963 "positive regulation of flavonoid biosynthetic process"
evidence=IEP;RCA] [GO:0043619 "regulation of transcription from RNA
polymerase II promoter in response to oxidative stress"
evidence=IMP] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IMP] [GO:2000068
"regulation of defense response to insect" evidence=IMP]
[GO:0009611 "response to wounding" evidence=IEP;RCA;TAS]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009620 "response to
fungus" evidence=RCA] [GO:0009694 "jasmonic acid metabolic process"
evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0009269 "response to desiccation" evidence=IEP] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634
GO:GO:0045893 GO:GO:0009753 GO:GO:0009611 GO:GO:0009738
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0010200
EMBL:AC017118 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0009269
GO:GO:0043619 GO:GO:0051090 eggNOG:NOG295658 GO:GO:0009963
EMBL:X99548 EMBL:AB000875 EMBL:AJ843256 EMBL:AY037203 EMBL:BT003042
EMBL:AF251691 IPI:IPI00543978 PIR:T52293 RefSeq:NP_174541.1
UniGene:At.22648 ProteinModelPortal:Q39204 SMR:Q39204 IntAct:Q39204
STRING:Q39204 PRIDE:Q39204 EnsemblPlants:AT1G32640.1 GeneID:840158
KEGG:ath:AT1G32640 GeneFarm:1895 TAIR:At1g32640 InParanoid:Q39204
KO:K13422 OMA:KRNHPAA PhylomeDB:Q39204 ProtClustDB:CLSN2682813
Genevestigator:Q39204 GermOnline:AT1G32640 GO:GO:2000068
Uniprot:Q39204
Length = 623
Score = 122 (48.0 bits), Expect = 0.00020, P = 0.00020
Identities = 26/90 (28%), Positives = 49/90 (54%)
Query: 293 KRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRAL 352
K G + + V+ + + + + RG A H +ER+RR+++N++ AL
Sbjct: 412 KTAGESDHSDLEASVVKEVAVEKRPKKRGRKPANGREEPLNHVEAERQRREKLNQRFYAL 471
Query: 353 QELIPRCNKSDKASMLDEAIEYLKSLQLQV 382
+ ++P +K DKAS+L +AI Y+ L+ +V
Sbjct: 472 RAVVPNVSKMDKASLLGDAIAYINELKSKV 501
>UNIPROTKB|O88529 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:10036 "Mesocricetus auratus"
[GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0032922 "circadian regulation of gene expression"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0006355
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 GO:GO:0032922 SMART:SM00086 TIGRFAMs:TIGR00229
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOVERGEN:HBG107503 EMBL:AF070917
ProteinModelPortal:O88529 IntAct:O88529 Uniprot:O88529
Length = 626
Score = 122 (48.0 bits), Expect = 0.00020, P = 0.00020
Identities = 30/93 (32%), Positives = 51/93 (54%)
Query: 291 DRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMR 350
+RKRKG TD + S D + + + + + A E H+ E+RRRD++N +
Sbjct: 36 NRKRKGSATDYQ-ESMDTDKDDPHGRLEY-AEHQGRIKNAREAHSQIEKRRRDKMNSFID 93
Query: 351 ALQELIPRCN----KSDKASMLDEAIEYLKSLQ 379
L L+P CN K DK ++L A++++K+L+
Sbjct: 94 ELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
>RGD|62003 [details] [associations]
symbol:Arntl "aryl hydrocarbon receptor nuclear translocator-like"
species:10116 "Rattus norvegicus" [GO:0000060 "protein import into
nucleus, translocation" evidence=ISO] [GO:0000982 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0001190 "RNA
polymerase II transcription factor binding transcription factor
activity involved in positive regulation of transcription"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IEA;ISO;ISS] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO;ISS] [GO:0007623 "circadian rhythm"
evidence=IEP;ISO] [GO:0016604 "nuclear body" evidence=ISO]
[GO:0017162 "aryl hydrocarbon receptor binding" evidence=ISO]
[GO:0032922 "circadian regulation of gene expression"
evidence=ISO;ISS] [GO:0042176 "regulation of protein catabolic
process" evidence=ISO] [GO:0042752 "regulation of circadian rhythm"
evidence=NAS] [GO:0043425 "bHLH transcription factor binding"
evidence=ISO] [GO:0045944 "positive regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051879 "Hsp90 protein
binding" evidence=ISO] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 RGD:62003 GO:GO:0005737
GO:GO:0006355 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0042752 GO:GO:0005667 GO:GO:0004871 GO:GO:0032922
SMART:SM00086 TIGRFAMs:TIGR00229 eggNOG:NOG293303
GeneTree:ENSGT00650000092935 HOGENOM:HOG000234379 Gene3D:4.10.280.10
SUPFAM:SSF47459 CTD:406 HOVERGEN:HBG107503 KO:K02296 EMBL:AB012600
EMBL:AF015953 EMBL:AF317669 EMBL:BC099833 IPI:IPI00339130
IPI:IPI00339131 IPI:IPI00339132 RefSeq:NP_077338.2 UniGene:Rn.14532
ProteinModelPortal:Q9EPW1 STRING:Q9EPW1 PhosphoSite:Q9EPW1
Ensembl:ENSRNOT00000019645 GeneID:29657 KEGG:rno:29657
UCSC:RGD:62003 NextBio:609947 ArrayExpress:Q9EPW1
Genevestigator:Q9EPW1 GermOnline:ENSRNOG00000014448 Uniprot:Q9EPW1
Length = 626
Score = 122 (48.0 bits), Expect = 0.00020, P = 0.00020
Identities = 30/93 (32%), Positives = 51/93 (54%)
Query: 291 DRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMR 350
+RKRKG TD + S D + + + + + A E H+ E+RRRD++N +
Sbjct: 36 NRKRKGSATDYQ-ESMDTDKDDPHGRLEY-AEHQGRIKNAREAHSQIEKRRRDKMNSFID 93
Query: 351 ALQELIPRCN----KSDKASMLDEAIEYLKSLQ 379
L L+P CN K DK ++L A++++K+L+
Sbjct: 94 ELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
>UNIPROTKB|Q9EPW1 [details] [associations]
symbol:Arntl "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:10116 "Rattus norvegicus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 RGD:62003
GO:GO:0005737 GO:GO:0006355 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0042752 GO:GO:0005667 GO:GO:0004871
GO:GO:0032922 SMART:SM00086 TIGRFAMs:TIGR00229 eggNOG:NOG293303
GeneTree:ENSGT00650000092935 HOGENOM:HOG000234379
Gene3D:4.10.280.10 SUPFAM:SSF47459 CTD:406 HOVERGEN:HBG107503
KO:K02296 EMBL:AB012600 EMBL:AF015953 EMBL:AF317669 EMBL:BC099833
IPI:IPI00339130 IPI:IPI00339131 IPI:IPI00339132 RefSeq:NP_077338.2
UniGene:Rn.14532 ProteinModelPortal:Q9EPW1 STRING:Q9EPW1
PhosphoSite:Q9EPW1 Ensembl:ENSRNOT00000019645 GeneID:29657
KEGG:rno:29657 UCSC:RGD:62003 NextBio:609947 ArrayExpress:Q9EPW1
Genevestigator:Q9EPW1 GermOnline:ENSRNOG00000014448 Uniprot:Q9EPW1
Length = 626
Score = 122 (48.0 bits), Expect = 0.00020, P = 0.00020
Identities = 30/93 (32%), Positives = 51/93 (54%)
Query: 291 DRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMR 350
+RKRKG TD + S D + + + + + A E H+ E+RRRD++N +
Sbjct: 36 NRKRKGSATDYQ-ESMDTDKDDPHGRLEY-AEHQGRIKNAREAHSQIEKRRRDKMNSFID 93
Query: 351 ALQELIPRCN----KSDKASMLDEAIEYLKSLQ 379
L L+P CN K DK ++L A++++K+L+
Sbjct: 94 ELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
>TAIR|locus:2083460 [details] [associations]
symbol:AT3G20640 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000241059 EMBL:AP002034 EMBL:AK118054 EMBL:BT008580
IPI:IPI00530194 RefSeq:NP_188700.1 UniGene:At.38202
ProteinModelPortal:Q8GXT3 SMR:Q8GXT3 EnsemblPlants:AT3G20640.1
GeneID:821611 KEGG:ath:AT3G20640 TAIR:At3g20640 eggNOG:NOG253493
InParanoid:Q8GXT3 OMA:YDQMASA PhylomeDB:Q8GXT3
ProtClustDB:CLSN2915619 Genevestigator:Q8GXT3 Uniprot:Q8GXT3
Length = 454
Score = 119 (46.9 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 28/90 (31%), Positives = 50/90 (55%)
Query: 301 DEYHSEDVELESADAKKQSRGST----SAKRSRAAEVHNLSERRRRDRINEKMRALQELI 356
DE E+ + + + RG +AKR+++ +R++++ +++ ALQ+L+
Sbjct: 302 DEQPKNISEIRDSSSNEVKRGGNDHQPAAKRAKSEAASPSPAFKRKEKMGDRIAALQQLV 361
Query: 357 PRCNKSDKASMLDEAIEYLKSLQLQVQMMS 386
K+D AS+L EAIEY+K L QV +S
Sbjct: 362 SPFGKTDAASVLSEAIEYIKFLHQQVSALS 391
Score = 41 (19.5 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 17/70 (24%), Positives = 27/70 (38%)
Query: 174 NFGLFARHMPREVASGPSNSKSVTIRESTVVDSSDT----PAPGPDSRASEAMRSMEGAS 229
N G F H S ++S +VT + V +SS+ P+S + G
Sbjct: 146 NRGFFLDHQFSPHGSSSTDSSTVTCQGFAVDNSSNAMYAATTTTPNSSSGMFHHQQAGGF 205
Query: 230 GVNNNNRCRN 239
G ++ RN
Sbjct: 206 GSSDQQPSRN 215
>TAIR|locus:2141055 [details] [associations]
symbol:MYC4 "AT4G17880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009718 "anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0045893 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006952 GO:GO:0003677 GO:GO:0009718
GO:GO:0003700 GO:GO:0006351 EMBL:AL161547 EMBL:AL021889
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 eggNOG:NOG295658
ProtClustDB:CLSN2686023 EMBL:AF251689 EMBL:AK221507 IPI:IPI00540927
PIR:T05074 RefSeq:NP_193522.1 UniGene:At.28316
ProteinModelPortal:O49687 SMR:O49687 EnsemblPlants:AT4G17880.1
GeneID:827511 KEGG:ath:AT4G17880 TAIR:At4g17880 InParanoid:O49687
OMA:SCERARQ PhylomeDB:O49687 Genevestigator:O49687 Uniprot:O49687
Length = 589
Score = 121 (47.7 bits), Expect = 0.00024, P = 0.00024
Identities = 27/82 (32%), Positives = 48/82 (58%)
Query: 302 EYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK 361
E S V +E + K + RG A H +ER+RR+++N++ +L+ ++P +K
Sbjct: 386 EAESNRVVVEP-EKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSK 444
Query: 362 SDKASMLDEAIEYLKSLQLQVQ 383
DKAS+L +AI Y+ L+ ++Q
Sbjct: 445 MDKASLLGDAISYISELKSKLQ 466
>TAIR|locus:2142419 [details] [associations]
symbol:AT5G10570 "AT5G10570" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL353995 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488594 IPI:IPI00529696 PIR:T49982
RefSeq:NP_196619.1 UniGene:At.32362 ProteinModelPortal:Q9LXA9
SMR:Q9LXA9 EnsemblPlants:AT5G10570.1 GeneID:830922
KEGG:ath:AT5G10570 TAIR:At5g10570 eggNOG:NOG310833
HOGENOM:HOG000029066 InParanoid:Q9LXA9 OMA:SSAFDYP PhylomeDB:Q9LXA9
ProtClustDB:CLSN2914918 Genevestigator:Q9LXA9 Uniprot:Q9LXA9
Length = 315
Score = 117 (46.2 bits), Expect = 0.00024, P = 0.00024
Identities = 26/65 (40%), Positives = 41/65 (63%)
Query: 319 SRGSTSAKRSR----AAEVHNL-SERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIE 373
S G T+ KRS NL +ERRRR R+N+++ L+ ++P+ K D+ S+L +AI+
Sbjct: 132 SIGETNKKRSNKKLEGQPSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAID 191
Query: 374 YLKSL 378
Y+K L
Sbjct: 192 YMKEL 196
>UNIPROTKB|Q69MD0 [details] [associations]
symbol:OSJNBb0019B14.23 "BHLH-like protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP005755
ProteinModelPortal:Q69MD0 EnsemblPlants:LOC_Os09g28900.1
Gramene:Q69MD0 OMA:EMLGAEC Uniprot:Q69MD0
Length = 215
Score = 113 (44.8 bits), Expect = 0.00026, P = 0.00026
Identities = 20/52 (38%), Positives = 36/52 (69%)
Query: 328 SRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 379
+RA H+ +ER+RR+RIN + L+ L+P ++ DKA++L E + Y++ L+
Sbjct: 26 TRARRSHSEAERKRRERINAHLDTLRGLVPSASRMDKAALLGEVVRYVRKLR 77
>UNIPROTKB|E2R130 [details] [associations]
symbol:ARNTL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AAEX03012928
Ensembl:ENSCAFT00000012969 Uniprot:E2R130
Length = 627
Score = 121 (47.7 bits), Expect = 0.00026, P = 0.00026
Identities = 31/94 (32%), Positives = 53/94 (56%)
Query: 291 DRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSR-AAEVHNLSERRRRDRINEKM 349
+RKRKG TD + E ++ + D + + R + A E H+ E+RRRD++N +
Sbjct: 36 NRKRKGSSTD---YQESMDTDKDDPHGRLDYTEHQGRIKNAREAHSQIEKRRRDKMNSFI 92
Query: 350 RALQELIPRCN----KSDKASMLDEAIEYLKSLQ 379
L L+P CN K DK ++L A++++K+L+
Sbjct: 93 DELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
>UNIPROTKB|Q8WYA1 [details] [associations]
symbol:ARNTL2 "Aryl hydrocarbon receptor nuclear
translocator-like protein 2" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA;NAS] [GO:0005634 "nucleus" evidence=IDA;NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0009649 "entrainment of circadian clock"
evidence=NAS] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0007623 "circadian
rhythm" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0000982 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity"
evidence=IDA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0005737
GO:GO:0003677 GO:GO:0009649 GO:GO:0007623 GO:GO:0045944
GO:GO:0005667 GO:GO:0004871 GO:GO:0000982 SMART:SM00086
TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOVERGEN:HBG107503 CTD:56938 eggNOG:NOG288887 KO:K09099
EMBL:AB039921 EMBL:AF256215 EMBL:AF231338 EMBL:AF231339
EMBL:AF246960 EMBL:AF246961 EMBL:AF246962 EMBL:AF246963
EMBL:AK296706 EMBL:AC068794 EMBL:AC092829 EMBL:BC000172
EMBL:BC125061 EMBL:BC125062 IPI:IPI00142781 IPI:IPI00163662
IPI:IPI00465306 IPI:IPI00788724 IPI:IPI00789255 IPI:IPI00795339
IPI:IPI00827866 IPI:IPI00827897 IPI:IPI01009213
RefSeq:NP_001234931.1 RefSeq:NP_001234932.1 RefSeq:NP_001234933.1
RefSeq:NP_001234934.1 RefSeq:NP_064568.3 UniGene:Hs.434269
UniGene:Hs.445447 PDB:2KDK PDBsum:2KDK ProteinModelPortal:Q8WYA1
SMR:Q8WYA1 IntAct:Q8WYA1 STRING:Q8WYA1 PhosphoSite:Q8WYA1
DMDM:124007121 PaxDb:Q8WYA1 PRIDE:Q8WYA1 Ensembl:ENST00000261178
Ensembl:ENST00000266503 Ensembl:ENST00000311001
Ensembl:ENST00000395901 Ensembl:ENST00000542388
Ensembl:ENST00000544915 Ensembl:ENST00000546179 GeneID:56938
KEGG:hsa:56938 UCSC:uc001rht.2 UCSC:uc001rhu.2 UCSC:uc001rhv.2
UCSC:uc001rhw.3 UCSC:uc009zji.2 GeneCards:GC12P027485
H-InvDB:HIX0037110 HGNC:HGNC:18984 MIM:614517 neXtProt:NX_Q8WYA1
PharmGKB:PA134896555 InParanoid:Q8WYA1 OMA:IPQCNPM PhylomeDB:Q8WYA1
GenomeRNAi:56938 NextBio:62501 ArrayExpress:Q8WYA1 Bgee:Q8WYA1
CleanEx:HS_ARNTL2 Genevestigator:Q8WYA1 Uniprot:Q8WYA1
Length = 636
Score = 121 (47.7 bits), Expect = 0.00027, P = 0.00027
Identities = 25/79 (31%), Positives = 45/79 (56%)
Query: 305 SEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCN---- 360
S +E+ ++ + G K E H+ +E+RRRD++N + L +IP+CN
Sbjct: 83 STRIEISASSGSRVEDGEHQVKMKAFREAHSQTEKRRRDKMNNLIEELSAMIPQCNPMAR 142
Query: 361 KSDKASMLDEAIEYLKSLQ 379
K DK ++L A+++L+SL+
Sbjct: 143 KLDKLTVLRMAVQHLRSLK 161
>TAIR|locus:2031978 [details] [associations]
symbol:AT1G05710 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0009723 "response to
ethylene stimulus" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS]
InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GO:GO:0003700 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240890 ProtClustDB:CLSN2687695 EMBL:AY072363
EMBL:BT006558 IPI:IPI00544028 RefSeq:NP_849597.1 UniGene:At.42378
UniGene:At.72027 ProteinModelPortal:Q8VY82 IntAct:Q8VY82
PRIDE:Q8VY82 EnsemblPlants:AT1G05710.2 GeneID:837078
KEGG:ath:AT1G05710 TAIR:At1g05710 InParanoid:Q8VY82 OMA:MENTVGV
PhylomeDB:Q8VY82 ArrayExpress:Q8VY82 Genevestigator:Q8VY82
Uniprot:Q8VY82
Length = 171
Score = 109 (43.4 bits), Expect = 0.00027, P = 0.00027
Identities = 25/77 (32%), Positives = 49/77 (63%)
Query: 319 SRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSL 378
S G +S KR ++ ++ + S + R+D++ E++ ALQ+++ K+D AS+L +A+ Y++ L
Sbjct: 19 SLGESSIKRHKS-DL-SFSSKERKDKVGERISALQQIVSPYGKTDTASVLLDAMHYIEFL 76
Query: 379 QLQVQMMSMGCGVVPMM 395
QV++ C +P M
Sbjct: 77 HEQVKV----CSSIPSM 89
>UNIPROTKB|Q7XKP5 [details] [associations]
symbol:OSJNBb0013O03.11 "OSJNBb0013O03.11 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008210 HOGENOM:HOG000006429 EMBL:AL731621
RefSeq:NP_001173851.1 UniGene:Os.98890
EnsemblPlants:LOC_Os04g23440.1 GeneID:9269507 KEGG:osa:9269507
OMA:NIAMERD Genevestigator:Q7XKP5 Uniprot:Q7XKP5
Length = 293
Score = 116 (45.9 bits), Expect = 0.00027, P = 0.00027
Identities = 29/79 (36%), Positives = 49/79 (62%)
Query: 303 YHSEDVELESADAKKQSRGSTS-AKRSRAAEVHNLS-ERRRRDRINEKMRALQELIPRCN 360
Y S+ +S+ + ST+ A + AA N++ ER RR R+NEK+ AL+ ++P+
Sbjct: 65 YTSQSRYADSSSPDVVNLCSTAVASAAAAASSKNIAMERDRRKRLNEKLFALRAVVPKIT 124
Query: 361 KSDKASMLDEAIEYLKSLQ 379
K DKAS++ +AI +++ LQ
Sbjct: 125 KMDKASIVRDAIAHIEKLQ 143
>UNIPROTKB|Q53L62 [details] [associations]
symbol:LOC_Os11g15210 "Helix-loop-helix DNA-binding domain,
putative" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC145364 EnsemblPlants:LOC_Os11g15210.1
KEGG:dosa:Os11t0258700-00 Uniprot:Q53L62
Length = 458
Score = 119 (46.9 bits), Expect = 0.00028, P = 0.00028
Identities = 24/65 (36%), Positives = 41/65 (63%)
Query: 319 SRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSL 378
S + + + + + H +SERRRR+++ E L+ ++P +K DKAS+L E I YLK L
Sbjct: 230 SAATMTTDQGSSIKNHVMSERRRREKLKEMFLILKSVVPSIHKVDKASILAETIAYLKEL 289
Query: 379 QLQVQ 383
+ +V+
Sbjct: 290 EKRVE 294
>TAIR|locus:2164605 [details] [associations]
symbol:AT5G56960 "AT5G56960" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010200 "response to chitin" evidence=IEP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010200 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB024035 IPI:IPI00545938 RefSeq:NP_200506.1 UniGene:At.55597
ProteinModelPortal:Q9LTS4 SMR:Q9LTS4 EnsemblPlants:AT5G56960.1
GeneID:835798 KEGG:ath:AT5G56960 TAIR:At5g56960 eggNOG:NOG254434
HOGENOM:HOG000095216 InParanoid:Q9LTS4 OMA:RENATTH PhylomeDB:Q9LTS4
ProtClustDB:CLSN2687375 Genevestigator:Q9LTS4 Uniprot:Q9LTS4
Length = 466
Score = 119 (46.9 bits), Expect = 0.00028, P = 0.00028
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 334 HNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 385
H +SER+RR+++NE +AL+ L+P K DKAS+L A E L SLQ ++ +
Sbjct: 290 HMISERKRREKLNESFQALRSLLPPGTKKDKASVLSIAREQLSSLQGEISKL 341
>ZFIN|ZDB-GENE-041210-21 [details] [associations]
symbol:tfec "transcription factor EC" species:7955
"Danio rerio" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR011598 InterPro:IPR021802
InterPro:IPR024097 InterPro:IPR024101 Pfam:PF00010 Pfam:PF11851
PROSITE:PS50888 SMART:SM00353 ZFIN:ZDB-GENE-041210-21 GO:GO:0006355
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
HOGENOM:HOG000231368 HOVERGEN:HBG006768 CTD:22797 eggNOG:NOG323513
KO:K15591 OrthoDB:EOG4PC9SS PANTHER:PTHR10014:SF13 EMBL:BC116471
IPI:IPI00500966 RefSeq:NP_001025276.2 UniGene:Dr.48383
GeneID:556894 KEGG:dre:556894 NextBio:20881715 Uniprot:Q1JQ62
Length = 396
Score = 118 (46.6 bits), Expect = 0.00028, P = 0.00028
Identities = 31/84 (36%), Positives = 48/84 (57%)
Query: 304 HSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSD 363
+S +E+ AD + +R AK + + HNL ERRRR IN +++ L LIP+ N D
Sbjct: 140 NSSMLEVYGADQEHDTR--VLAKERQKKDNHNLIERRRRYNINYRIKELGTLIPKSNDPD 197
Query: 364 ----KASMLDEAIEYLKSLQLQVQ 383
K ++L ++EY+K LQ + Q
Sbjct: 198 MRWNKGTILKASVEYIKWLQKEQQ 221
>UNIPROTKB|Q6ZJC8 [details] [associations]
symbol:OJ1666_A04.16 "Os08g0477900 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003917 RefSeq:NP_001062047.1 UniGene:Os.73988
EnsemblPlants:LOC_Os08g37290.1 GeneID:4345836 KEGG:osa:4345836
OMA:LLNRDEH ProtClustDB:CLSN2697408 Uniprot:Q6ZJC8
Length = 223
Score = 113 (44.8 bits), Expect = 0.00029, P = 0.00029
Identities = 22/65 (33%), Positives = 39/65 (60%)
Query: 328 SRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM 387
S A H+ +ER+RR RIN + L+ L+P ++ DKA++L E + +++ L+ + +
Sbjct: 17 SPAVRSHSEAERKRRQRINAHLATLRTLVPSASRMDKAALLGEVVRHVRELRCRADDATE 76
Query: 388 GCGVV 392
G VV
Sbjct: 77 GADVV 81
>TAIR|locus:2137574 [details] [associations]
symbol:AT4G37850 "AT4G37850" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL035709
EMBL:AL161592 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
ProtClustDB:CLSN2690865 EMBL:AF488567 IPI:IPI00544527 PIR:T06032
RefSeq:NP_195498.3 UniGene:At.31223 ProteinModelPortal:Q9T072
SMR:Q9T072 EnsemblPlants:AT4G37850.1 GeneID:829941
KEGG:ath:AT4G37850 TAIR:At4g37850 eggNOG:NOG262524
InParanoid:Q8S3F0 PhylomeDB:Q9T072 Genevestigator:Q9T072
Uniprot:Q9T072
Length = 328
Score = 116 (45.9 bits), Expect = 0.00034, P = 0.00034
Identities = 23/67 (34%), Positives = 42/67 (62%)
Query: 316 KKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYL 375
K R ++ A+ H ++ER+RR+++ ++ AL L+P K DKAS+L +A++++
Sbjct: 135 KGTKRAQPFSRNQSNAQDHIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHI 194
Query: 376 KSLQLQV 382
K LQ +V
Sbjct: 195 KYLQERV 201
>UNIPROTKB|E9PPV4 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9606 "Homo sapiens"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR001067
InterPro:IPR011598 Pfam:PF00010 PRINTS:PR00785 PROSITE:PS50888
SMART:SM00353 GO:GO:0005737 GO:GO:0003700 GO:GO:0005667
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC016884 EMBL:AC022878
HGNC:HGNC:701 IPI:IPI00978797 ProteinModelPortal:E9PPV4 SMR:E9PPV4
Ensembl:ENST00000530357 ArrayExpress:E9PPV4 Bgee:E9PPV4
Uniprot:E9PPV4
Length = 141
Score = 101 (40.6 bits), Expect = 0.00035, P = 0.00035
Identities = 27/82 (32%), Positives = 45/82 (54%)
Query: 308 VELESADAKKQS---RGSTSAKRSR---AAEVHNLSERRRRDRINEKMRALQELIPRCN- 360
+ +ES D K R + + R A E H+ E+RRRD++N + L L+P CN
Sbjct: 2 INIESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNA 61
Query: 361 ---KSDKASMLDEAIEYLKSLQ 379
K DK ++L A++++K+L+
Sbjct: 62 MSRKLDKLTVLRMAVQHMKTLR 83
>TAIR|locus:2020003 [details] [associations]
symbol:AT1G10610 "AT1G10610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC009398 Gene3D:4.10.280.10
SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215 EMBL:AC007067
HOGENOM:HOG000033929 EMBL:AK229375 EMBL:AF488620 IPI:IPI00786098
PIR:F86239 RefSeq:NP_172531.2 UniGene:At.42172
ProteinModelPortal:Q0WNR2 SMR:Q0WNR2 EnsemblPlants:AT1G10610.1
GeneID:837604 KEGG:ath:AT1G10610 TAIR:At1g10610 eggNOG:NOG318339
OMA:GIHGEVV PhylomeDB:Q0WNR2 ProtClustDB:CLSN2920225
Genevestigator:Q0WNR2 Uniprot:Q0WNR2
Length = 441
Score = 117 (46.2 bits), Expect = 0.00044, P = 0.00044
Identities = 22/80 (27%), Positives = 49/80 (61%)
Query: 306 EDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKA 365
+DV +++A+ K ++ + ++ +H SER+RR+RIN+ M L+ ++P+ K +K
Sbjct: 239 KDVVVQNANDSKANKKLLPTENFKSKNLH--SERKRRERINQAMYGLRAVVPKITKLNKI 296
Query: 366 SMLDEAIEYLKSLQLQVQMM 385
+ +A++Y+ L ++ Q +
Sbjct: 297 GIFSDAVDYINELLVEKQKL 316
>UNIPROTKB|Q9I8T7 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9031 "Gallus gallus"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000060 "protein import into nucleus,
translocation" evidence=IEA] [GO:0000982 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0001190 "RNA
polymerase II transcription factor binding transcription factor
activity involved in positive regulation of transcription"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0016604 "nuclear
body" evidence=IEA] [GO:0017162 "aryl hydrocarbon receptor binding"
evidence=IEA] [GO:0032922 "circadian regulation of gene expression"
evidence=IEA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0043425 "bHLH transcription factor binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005737 GO:GO:0003677 GO:GO:0007623 GO:GO:0005667
GO:GO:0000060 GO:GO:0004871 GO:GO:0000982 SMART:SM00086
TIGRFAMs:TIGR00229 GO:GO:0001190 eggNOG:NOG293303
GeneTree:ENSGT00650000092935 HOGENOM:HOG000234379
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956 GO:GO:0042176
EMBL:AF205219 EMBL:AF246957 IPI:IPI00577807 RefSeq:NP_001001463.1
UniGene:Gga.1329 ProteinModelPortal:Q9I8T7 STRING:Q9I8T7
Ensembl:ENSGALT00000032732 GeneID:374115 KEGG:gga:374115 CTD:406
HOVERGEN:HBG107503 InParanoid:Q9I8T7 KO:K02296 OMA:EKINTNC
OrthoDB:EOG4NS3B2 NextBio:20813631 ArrayExpress:Q9I8T7
Uniprot:Q9I8T7
Length = 633
Score = 119 (46.9 bits), Expect = 0.00044, P = 0.00044
Identities = 32/99 (32%), Positives = 50/99 (50%)
Query: 291 DRKRKGRETDDEYHSEDVELESADAKKQSR------GSTSAKRSRAAEVHNLSERRRRDR 344
+RKRKG TD + E E D K + + A E H+ E+RRRD+
Sbjct: 36 NRKRKGSSTDYQLDGFPFE-EGMDTDKDDQHGRLDYADQQGRIKNAREAHSQIEKRRRDK 94
Query: 345 INEKMRALQELIPRCN----KSDKASMLDEAIEYLKSLQ 379
+N + L L+P CN K DK ++L A++++K+L+
Sbjct: 95 MNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 133
>TAIR|locus:2115683 [details] [associations]
symbol:AT4G05170 "AT4G05170" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA]
InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 EMBL:AL161503 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000095220 EMBL:BT015446 IPI:IPI00532427 IPI:IPI01019413
PIR:A85065 RefSeq:NP_192426.2 UniGene:At.51015
ProteinModelPortal:Q9M0X8 SMR:Q9M0X8 DNASU:825865 GeneID:825865
KEGG:ath:AT4G05170 TAIR:At4g05170 eggNOG:NOG256664 PhylomeDB:Q9M0X8
ArrayExpress:Q9M0X8 Genevestigator:Q9M0X8 Uniprot:Q9M0X8
Length = 298
Score = 114 (45.2 bits), Expect = 0.00047, P = 0.00047
Identities = 29/96 (30%), Positives = 51/96 (53%)
Query: 292 RKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNL-SERRRRDRINEKMR 350
+ K + T D + E + KR R + L S + R++++ +++
Sbjct: 125 KSSKEQITQDYKNLTSKRSEELEENSDEYSPRLLKRPRLETLSPLPSFKVRKEKLGDRIT 184
Query: 351 ALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMS 386
ALQ+L+ K+D AS+L+EA+EY+K LQ QV ++S
Sbjct: 185 ALQQLVSPFGKTDTASVLNEAVEYIKFLQEQVTVLS 220
>UNIPROTKB|Q84R79 [details] [associations]
symbol:OSJNBb0113I20.1 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R79 Gramene:Q84R79
Uniprot:Q84R79
Length = 301
Score = 114 (45.2 bits), Expect = 0.00048, P = 0.00048
Identities = 22/72 (30%), Positives = 46/72 (63%)
Query: 315 AKKQSRGSTSAKRSRAAEV-HNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIE 373
A ++ G+ + A++ H ++ER+RR++IN++ L +IP+ K DKA++L +A
Sbjct: 111 AVQEDLGAHGGAAAAYAQLEHVVAERKRREKINQRFMELSAVIPKLKKMDKATILSDAAS 170
Query: 374 YLKSLQLQVQMM 385
Y++ LQ +++ +
Sbjct: 171 YIRELQEKLKAL 182
>UNIPROTKB|Q75IR0 [details] [associations]
symbol:OSJNBb0099P06.13 "Putative uncharacterized protein
OSJNBb0099P06.13" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR002912
InterPro:IPR011598 Pfam:PF00010 Pfam:PF01842 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0016597 GO:GO:0008152
EMBL:AP008211 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC124144
EMBL:AC134341 EMBL:AK110619 RefSeq:NP_001054739.1 UniGene:Os.56950
EnsemblPlants:LOC_Os05g07120.1 EnsemblPlants:LOC_Os05g07120.2
GeneID:4337905 KEGG:osa:4337905 eggNOG:NOG309133
HOGENOM:HOG000241234 OMA:VSCDDRP ProtClustDB:CLSN2691085
Uniprot:Q75IR0
Length = 271
Score = 113 (44.8 bits), Expect = 0.00049, P = 0.00049
Identities = 21/61 (34%), Positives = 39/61 (63%)
Query: 319 SRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSL 378
S G ++A ++ A +H+ +ERRRR+RIN + L+ ++P + DKA++L + +K L
Sbjct: 55 SSGRSAAAQATAMTIHSEAERRRRERINAHLATLRRILPDAKQMDKATLLASVVNQVKHL 114
Query: 379 Q 379
+
Sbjct: 115 K 115
>UNIPROTKB|C9JBW0 [details] [associations]
symbol:KIAA2018 "Basic helix-loop-helix domain-containing
protein KIAA2018" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC055740 HGNC:HGNC:30494 ChiTaRS:KIAA2018
EMBL:AC108693 IPI:IPI00829891 ProteinModelPortal:C9JBW0 SMR:C9JBW0
Ensembl:ENST00000491165 HOGENOM:HOG000185801 ArrayExpress:C9JBW0
Bgee:C9JBW0 Uniprot:C9JBW0
Length = 88
Score = 94 (38.1 bits), Expect = 0.00050, P = 0.00050
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 327 RSRAAEVHNLSERRRRDRINEKMRALQELIPRCN---KSDKASMLDEAIEYLKSLQLQ 381
R + E HN ER R+ +IN + + ELIP C+ K K +LD+A +Y+ L+ Q
Sbjct: 16 RKKNRETHNAVERHRKKKINAGINRIGELIP-CSPALKQSKNMILDQAFKYITELKRQ 72
>UNIPROTKB|C9JBI8 [details] [associations]
symbol:MITF "Microphthalmia-associated transcription
factor" species:9606 "Homo sapiens" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR011598
InterPro:IPR024097 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
EMBL:AC099326 EMBL:AC104445 EMBL:AC104449 EMBL:AC124915
HGNC:HGNC:7105 HOGENOM:HOG000231368 IPI:IPI00952616
ProteinModelPortal:C9JBI8 SMR:C9JBI8 STRING:C9JBI8
Ensembl:ENST00000451708 ArrayExpress:C9JBI8 Bgee:C9JBI8
Uniprot:C9JBI8
Length = 361
Score = 115 (45.5 bits), Expect = 0.00053, P = 0.00053
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 309 ELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSD----K 364
EL + +S AK + + HNL ERRRR IN++++ L LIP+ N D K
Sbjct: 275 ELTACIFPTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNK 334
Query: 365 ASMLDEAIEYLKSLQLQVQ 383
++L +++Y++ LQ + Q
Sbjct: 335 GTILKASVDYIRKLQREQQ 353
>UNIPROTKB|F1M9B4 [details] [associations]
symbol:Mitf "Microphthalmia-associated transcription
factor" species:10116 "Rattus norvegicus" [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR011598
InterPro:IPR021802 InterPro:IPR024097 Pfam:PF00010 Pfam:PF11851
PROSITE:PS50888 SMART:SM00353 RGD:3092 GO:GO:0006355
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
IPI:IPI00563001 Ensembl:ENSRNOT00000050449 ArrayExpress:F1M9B4
Uniprot:F1M9B4
Length = 374
Score = 115 (45.5 bits), Expect = 0.00056, P = 0.00056
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 309 ELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSD----K 364
EL + +S AK + + HNL ERRRR IN++++ L LIP+ N D K
Sbjct: 139 ELTACIFPTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNK 198
Query: 365 ASMLDEAIEYLKSLQLQVQ 383
++L +++Y++ LQ + Q
Sbjct: 199 GTILKASVDYIRKLQREQQ 217
>ASPGD|ASPL0000062836 [details] [associations]
symbol:AN1114 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:AACD01000016 EMBL:BN001308
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG242942
RefSeq:XP_658718.1 ProteinModelPortal:Q5BEB6
EnsemblFungi:CADANIAT00001514 GeneID:2876891 KEGG:ani:AN1114.2
HOGENOM:HOG000206916 OMA:VNYLEKC Uniprot:Q5BEB6
Length = 393
Score = 111 (44.1 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 25/71 (35%), Positives = 44/71 (61%)
Query: 316 KKQSRGSTSAKRSRAAEV-HNLSERRRRDRINEKMRALQELIPRC--NKSDKASMLDEAI 372
KKQ +++A R A + H+L ERRRR ++NE+ L+ +IP C ++ K ++L +I
Sbjct: 146 KKQPSATSAAGRKIARKTAHSLIERRRRSKMNEEFSTLKNMIPACRGHEMHKLAILQASI 205
Query: 373 EYLKSLQLQVQ 383
+Y+ L+ +Q
Sbjct: 206 DYVNYLEKCIQ 216
Score = 44 (20.5 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 53 RSLKKSQPS--FPADQSAPREIPS 74
R +S PS FPA ++PR PS
Sbjct: 51 RKSSRSNPSILFPASPTSPRIDPS 74
>UNIPROTKB|E2QVE1 [details] [associations]
symbol:MYCL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR002418 InterPro:IPR011598
InterPro:IPR012682 Pfam:PF00010 Pfam:PF01056 PIRSF:PIRSF001705
PRINTS:PR00044 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003700 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00510000046414 KO:K09110 CTD:4610 EMBL:AAEX03009567
EMBL:AAEX03009568 RefSeq:XP_539578.2 Ensembl:ENSCAFT00000004860
GeneID:482461 KEGG:cfa:482461 NextBio:20857051 Uniprot:E2QVE1
Length = 393
Score = 115 (45.5 bits), Expect = 0.00061, P = 0.00061
Identities = 31/99 (31%), Positives = 53/99 (53%)
Query: 285 QKPAAE-DRKRKGRETDDEYHSED-VELESADAKKQSRGSTSAKRSRAAEVHNLSERRRR 342
Q+ A E D + E D+E S VE E+ + GS+ + + HN ER+RR
Sbjct: 264 QEEALERDAPEEKEEVDEETVSRPPVESEAPQSCHPKPGSSDTEDVTKRKNHNFLERKRR 323
Query: 343 DRINEKMRALQELIPR---CNKSDKASMLDEAIEYLKSL 378
+ + + AL++ +P C+K+ K +L +A+EYL++L
Sbjct: 324 NDLRSRFLALRDQVPTLASCSKAPKVVILSKALEYLQAL 362
>UNIPROTKB|F1SFN4 [details] [associations]
symbol:F1SFN4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR011598 InterPro:IPR024097 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0006355 Gene3D:4.10.280.10
SUPFAM:SSF47459 PANTHER:PTHR10014 GeneTree:ENSGT00390000004402
EMBL:CU896681 Ensembl:ENSSSCT00000012601 Uniprot:F1SFN4
Length = 353
Score = 114 (45.2 bits), Expect = 0.00065, P = 0.00065
Identities = 31/93 (33%), Positives = 47/93 (50%)
Query: 300 DDEYHSEDVEL-----ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQE 354
D YH EL KK+ R K+ R E +N ERRRR IN++++ L
Sbjct: 238 DSTYHGNKTELFIPLLSFFLCKKKER-KKERKKERKKESYNTFERRRRFNINDRIKELGT 296
Query: 355 LIPRCNKSD----KASMLDEAIEYLKSLQLQVQ 383
LIP+ N D K ++L +++Y++ LQ + Q
Sbjct: 297 LIPKSNDPDMRWNKGTILKASVDYIRKLQREQQ 329
>UNIPROTKB|J9JHQ6 [details] [associations]
symbol:MYCL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR002418 InterPro:IPR011598
InterPro:IPR012682 Pfam:PF00010 Pfam:PF01056 PIRSF:PIRSF001705
PRINTS:PR00044 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003700 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00510000046414 OMA:APQSCHP EMBL:AAEX03009567
EMBL:AAEX03009568 Ensembl:ENSCAFT00000047580 Uniprot:J9JHQ6
Length = 419
Score = 115 (45.5 bits), Expect = 0.00067, P = 0.00067
Identities = 31/99 (31%), Positives = 53/99 (53%)
Query: 285 QKPAAE-DRKRKGRETDDEYHSED-VELESADAKKQSRGSTSAKRSRAAEVHNLSERRRR 342
Q+ A E D + E D+E S VE E+ + GS+ + + HN ER+RR
Sbjct: 290 QEEALERDAPEEKEEVDEETVSRPPVESEAPQSCHPKPGSSDTEDVTKRKNHNFLERKRR 349
Query: 343 DRINEKMRALQELIPR---CNKSDKASMLDEAIEYLKSL 378
+ + + AL++ +P C+K+ K +L +A+EYL++L
Sbjct: 350 NDLRSRFLALRDQVPTLASCSKAPKVVILSKALEYLQAL 388
>UNIPROTKB|Q864F3 [details] [associations]
symbol:MITF "Microphthalmia-associated transcription
factor" species:9615 "Canis lupus familiaris" [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR011598
InterPro:IPR021802 InterPro:IPR024097 Pfam:PF00010 Pfam:PF11851
PROSITE:PS50888 SMART:SM00353 GO:GO:0006355 Gene3D:4.10.280.10
SUPFAM:SSF47459 PANTHER:PTHR10014 HSSP:P22415 CTD:4286
HOGENOM:HOG000231368 HOVERGEN:HBG006768 KO:K09455 OMA:YSNQGLP
GeneTree:ENSGT00390000004402 EMBL:AAEX03012128 EMBL:AY240952
EMBL:AY360380 EMBL:AY360373 EMBL:AY360374 EMBL:AY360375
EMBL:AY360376 EMBL:AY360377 EMBL:AY360378 EMBL:AY360379
RefSeq:NP_001003337.1 UniGene:Cfa.2682 STRING:Q864F3
Ensembl:ENSCAFT00000010493 GeneID:415126 KEGG:cfa:415126
NextBio:20818805 Uniprot:Q864F3
Length = 419
Score = 115 (45.5 bits), Expect = 0.00067, P = 0.00067
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 309 ELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSD----K 364
EL + +S AK + + HNL ERRRR IN++++ L LIP+ N D K
Sbjct: 184 ELTACIFPTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNK 243
Query: 365 ASMLDEAIEYLKSLQLQVQ 383
++L +++Y++ LQ + Q
Sbjct: 244 GTILKASVDYIRKLQREQQ 262
>UNIPROTKB|Q5SMX4 [details] [associations]
symbol:P0498B01.36 "cDNA clone:J033115I17, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008207 EMBL:AP003417 EMBL:HQ858870
EMBL:AK102964 RefSeq:NP_001042293.1 UniGene:Os.32770 GeneID:4327325
KEGG:osa:4327325 eggNOG:NOG253236 OMA:GNNGFMC
ProtClustDB:CLSN2691168 Uniprot:Q5SMX4
Length = 439
Score = 115 (45.5 bits), Expect = 0.00073, P = 0.00073
Identities = 26/69 (37%), Positives = 41/69 (59%)
Query: 311 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDE 370
+ A A S + A S H +SER+RR+++N+ AL+ ++P +K DK S+L
Sbjct: 232 QQAAAAAASASAAEAPPSGNQLQHMISERKRREKLNDSFLALKAVLPPGSKKDKTSILIR 291
Query: 371 AIEYLKSLQ 379
A EY+KSL+
Sbjct: 292 AREYVKSLE 300
>UNIPROTKB|Q8LSP3 [details] [associations]
symbol:OJ1203D03.3 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000009 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC099732
EnsemblPlants:LOC_Os03g12760.1 KEGG:dosa:Os03t0229100-00
HOGENOM:HOG000239880 OMA:DSCLNIT Uniprot:Q8LSP3
Length = 451
Score = 115 (45.5 bits), Expect = 0.00076, P = 0.00076
Identities = 23/66 (34%), Positives = 43/66 (65%)
Query: 326 KRSRA---AEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQV 382
+RSR A+ H ++ER+RR+++ ++ AL ++P K+DK S+L I+Y+K L+ +V
Sbjct: 277 RRSRPPANAQEHVIAERKRREKLQQQFVALATIVPGLKKTDKISLLGSTIDYVKQLEEKV 336
Query: 383 QMMSMG 388
+ + G
Sbjct: 337 KALEEG 342
>UNIPROTKB|G3V2R5 [details] [associations]
symbol:MAX "Protein max" species:9606 "Homo sapiens"
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL139022 HGNC:HGNC:6913
ChiTaRS:MAX ProteinModelPortal:G3V2R5 SMR:G3V2R5
Ensembl:ENST00000556443 ArrayExpress:G3V2R5 Bgee:G3V2R5
Uniprot:G3V2R5
Length = 125
Score = 92 (37.4 bits), Expect = 0.00082, P = 0.00082
Identities = 24/77 (31%), Positives = 44/77 (57%)
Query: 305 SEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCN--KS 362
++D+E+ES DA K++ HN ER+RRD I + +L++ +P K+
Sbjct: 4 NDDIEVES-DADKRAH-------------HNALERKRRDHIKDSFHSLRDSVPSLQGEKA 49
Query: 363 DKASMLDEAIEYLKSLQ 379
+A +LD+A EY++ ++
Sbjct: 50 SRAQILDKATEYIQYMR 66
>UNIPROTKB|G3V563 [details] [associations]
symbol:MAX "Protein max" species:9606 "Homo sapiens"
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL139022 HGNC:HGNC:6913
ChiTaRS:MAX ProteinModelPortal:G3V563 SMR:G3V563
Ensembl:ENST00000557746 ArrayExpress:G3V563 Bgee:G3V563
Uniprot:G3V563
Length = 121
Score = 92 (37.4 bits), Expect = 0.00082, P = 0.00082
Identities = 24/77 (31%), Positives = 44/77 (57%)
Query: 305 SEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCN--KS 362
++D+E+ES DA K++ HN ER+RRD I + +L++ +P K+
Sbjct: 4 NDDIEVES-DADKRAH-------------HNALERKRRDHIKDSFHSLRDSVPSLQGEKA 49
Query: 363 DKASMLDEAIEYLKSLQ 379
+A +LD+A EY++ ++
Sbjct: 50 SRAQILDKATEYIQYMR 66
>UNIPROTKB|Q6V3B1 [details] [associations]
symbol:MAX "MAX protein" species:9606 "Homo sapiens"
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P61244 EMBL:AL139022
HOVERGEN:HBG008542 UniGene:Hs.285354 HGNC:HGNC:6913 ChiTaRS:MAX
EMBL:AY353088 EMBL:CR542191 IPI:IPI01024945 SMR:Q6V3B1
STRING:Q6V3B1 Ensembl:ENST00000555667 UCSC:uc001xii.1
Uniprot:Q6V3B1
Length = 94
Score = 92 (37.4 bits), Expect = 0.00082, P = 0.00082
Identities = 24/77 (31%), Positives = 44/77 (57%)
Query: 305 SEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCN--KS 362
++D+E+ES DA K++ HN ER+RRD I + +L++ +P K+
Sbjct: 4 NDDIEVES-DADKRAH-------------HNALERKRRDHIKDSFHSLRDSVPSLQGEKA 49
Query: 363 DKASMLDEAIEYLKSLQ 379
+A +LD+A EY++ ++
Sbjct: 50 SRAQILDKATEYIQYMR 66
>WB|WBGene00003509 [details] [associations]
symbol:mxl-1 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] [GO:0005667 "transcription factor complex"
evidence=IPI] InterPro:IPR002418 InterPro:IPR011598 Pfam:PF00010
PRINTS:PR00044 PROSITE:PS50888 SMART:SM00353 GO:GO:0003700
GO:GO:0005667 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P61244
EMBL:Z74043 GeneTree:ENSGT00530000064011 EMBL:U82967 PIR:T24979
RefSeq:NP_505856.1 UniGene:Cel.19449 SMR:G5EEH5 IntAct:G5EEH5
EnsemblMetazoa:T19B10.11 GeneID:179557 KEGG:cel:CELE_T19B10.11
CTD:179557 WormBase:T19B10.11 OMA:PKRHARE NextBio:905926
Uniprot:G5EEH5
Length = 124
Score = 92 (37.4 bits), Expect = 0.00082, P = 0.00082
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 321 GSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCN----KSDKASMLDEAIEYLK 376
G KR A E HN ERRRRD I + +L+E++P N ++ +A +L +AIE ++
Sbjct: 22 GPFDPKR-HAREQHNALERRRRDNIKDMYTSLREVVPDANGERVQASRAVILKKAIESIE 80
Query: 377 SLQLQVQMMSM 387
Q +S+
Sbjct: 81 KGQSDSATLSV 91
>UNIPROTKB|G5EEH5 [details] [associations]
symbol:mxl-1 "Protein MXL-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR002418 InterPro:IPR011598 Pfam:PF00010 PRINTS:PR00044
PROSITE:PS50888 SMART:SM00353 GO:GO:0003700 GO:GO:0005667
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P61244 EMBL:Z74043
GeneTree:ENSGT00530000064011 EMBL:U82967 PIR:T24979
RefSeq:NP_505856.1 UniGene:Cel.19449 SMR:G5EEH5 IntAct:G5EEH5
EnsemblMetazoa:T19B10.11 GeneID:179557 KEGG:cel:CELE_T19B10.11
CTD:179557 WormBase:T19B10.11 OMA:PKRHARE NextBio:905926
Uniprot:G5EEH5
Length = 124
Score = 92 (37.4 bits), Expect = 0.00082, P = 0.00082
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 321 GSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCN----KSDKASMLDEAIEYLK 376
G KR A E HN ERRRRD I + +L+E++P N ++ +A +L +AIE ++
Sbjct: 22 GPFDPKR-HAREQHNALERRRRDNIKDMYTSLREVVPDANGERVQASRAVILKKAIESIE 80
Query: 377 SLQLQVQMMSM 387
Q +S+
Sbjct: 81 KGQSDSATLSV 91
>UNIPROTKB|F7A3Z7 [details] [associations]
symbol:MITF "Uncharacterized protein" species:9796 "Equus
caballus" [GO:0045944 "positive regulation of transcription from
RNA polymerase II promoter" evidence=ISS] InterPro:IPR011598
InterPro:IPR021802 InterPro:IPR024097 Pfam:PF00010 Pfam:PF11851
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0043066
GO:GO:0043234 GO:GO:0006461 GO:GO:0016055 GO:GO:0003677
GO:GO:0046849 GO:GO:0003682 GO:GO:0003705 GO:GO:0042127
GO:GO:0001077 GO:GO:0043010 GO:GO:0045670 Gene3D:4.10.280.10
SUPFAM:SSF47459 PANTHER:PTHR10014 GO:GO:0030318 GO:GO:0045165
GO:GO:0030316 OMA:YSNQGLP GeneTree:ENSGT00390000004402
Ensembl:ENSECAT00000006351 Uniprot:F7A3Z7
Length = 492
Score = 115 (45.5 bits), Expect = 0.00086, P = 0.00086
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 309 ELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSD----K 364
EL + +S AK + + HNL ERRRR IN++++ L LIP+ N D K
Sbjct: 257 ELTACIFPTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNK 316
Query: 365 ASMLDEAIEYLKSLQLQVQ 383
++L +++Y++ LQ + Q
Sbjct: 317 GTILKASVDYIRKLQREQQ 335
>UNIPROTKB|J9P3T5 [details] [associations]
symbol:ARNTL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AAEX03015178
Ensembl:ENSCAFT00000046810 Uniprot:J9P3T5
Length = 593
Score = 116 (45.9 bits), Expect = 0.00086, P = 0.00086
Identities = 34/99 (34%), Positives = 52/99 (52%)
Query: 292 RKRKGRETDDEYHSEDVELESADAKKQ-------SRGSTSAKRSRAAEVHNLSERRRRDR 344
RKRKG ++D E K +R SA S + E H+ +E+RRRD+
Sbjct: 22 RKRKGSDSDPSQSGIMTEKMVEKLSKNPFTYLLSTRIEISAS-SGSREAHSQTEKRRRDK 80
Query: 345 INEKMRALQELIPRCN----KSDKASMLDEAIEYLKSLQ 379
+N + L +IP+CN K DK ++L A+++LKSL+
Sbjct: 81 MNNLIEELSAMIPQCNPVPRKLDKLTVLRMAVQHLKSLK 119
>UNIPROTKB|Q07016 [details] [associations]
symbol:max "Protein max" species:8355 "Xenopus laevis"
[GO:0071339 "MLL1 complex" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0071339 HOVERGEN:HBG008542 KO:K04453 EMBL:L09739 EMBL:L09738
EMBL:L04923 EMBL:L04924 PIR:B56883 PIR:I51586 PIR:I51587
RefSeq:NP_001079118.1 RefSeq:NP_001089042.1 UniGene:Xl.896
UniGene:Xl.904 ProteinModelPortal:Q07016 SMR:Q07016 GeneID:373652
GeneID:504192 KEGG:xla:373652 KEGG:xla:504192 CTD:373652 CTD:504192
Xenbase:XB-GENE-6252877 Uniprot:Q07016
Length = 163
Score = 104 (41.7 bits), Expect = 0.00090, P = 0.00090
Identities = 27/77 (35%), Positives = 46/77 (59%)
Query: 305 SEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCN--KS 362
++D+E+ES + SR SA + RA HN ER+RRD I + L++ +P K+
Sbjct: 4 NDDIEVESDE--DSSRFPYSADK-RAH--HNALERKRRDHIKDSFHGLRDSVPSLQGEKA 58
Query: 363 DKASMLDEAIEYLKSLQ 379
+A +LD+A EY++ ++
Sbjct: 59 SRAQILDKATEYIQYMR 75
>TAIR|locus:2179122 [details] [associations]
symbol:APTX "APRATAXIN-like" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0006790 "sulfur compound metabolic
process" evidence=IDA] [GO:0009150 "purine ribonucleotide metabolic
process" evidence=IDA] [GO:0047627 "adenylylsulfatase activity"
evidence=IDA] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006259 "DNA metabolic process" evidence=RCA] [GO:0006310 "DNA
recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR011146
InterPro:IPR011598 InterPro:IPR015880 Pfam:PF00010 PROSITE:PS00028
PROSITE:PS50157 PROSITE:PS50888 PROSITE:PS51084 SMART:SM00353
SMART:SM00355 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0006260
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 Gene3D:3.30.428.10 InterPro:IPR001310
SUPFAM:SSF54197 PROSITE:PS00892 InterPro:IPR019808 eggNOG:NOG278510
KO:K10863 PANTHER:PTHR12486 GO:GO:0006790 EMBL:AL161746
IPI:IPI00539681 PIR:T48153 RefSeq:NP_195751.1 UniGene:At.54671
ProteinModelPortal:Q9M041 SMR:Q9M041 PRIDE:Q9M041
EnsemblPlants:AT5G01310.1 GeneID:830940 KEGG:ath:AT5G01310
GeneFarm:3073 TAIR:At5g01310 HOGENOM:HOG000083464 InParanoid:Q9M041
OMA:GHEGNLQ PhylomeDB:Q9M041 ProtClustDB:CLSN2687115
BioCyc:ARA:AT5G01310-MONOMER Genevestigator:Q9M041 GO:GO:0047627
GO:GO:0009150 InterPro:IPR002589 Pfam:PF01661 PROSITE:PS51154
Uniprot:Q9M041
Length = 912
Score = 118 (46.6 bits), Expect = 0.00091, P = 0.00091
Identities = 26/69 (37%), Positives = 41/69 (59%)
Query: 317 KQSRGSTSAKRSRAA---EVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIE 373
K G+T RS + + +++ R RR RI+++ + LQ ++P K D SMLDEAI
Sbjct: 28 KSETGNTKRSRSTSTLSTDPQSVAARDRRHRISDRFKILQSMVPGGAKMDTVSMLDEAIS 87
Query: 374 YLKSLQLQV 382
Y+K L+ Q+
Sbjct: 88 YVKFLKAQI 96
>UNIPROTKB|F1LQV3 [details] [associations]
symbol:Mitf "Microphthalmia-associated transcription
factor" species:10116 "Rattus norvegicus" [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 InterPro:IPR021802
InterPro:IPR024097 Pfam:PF00010 Pfam:PF11851 PROSITE:PS50888
SMART:SM00353 RGD:3092 GO:GO:0005634 GO:GO:0043066 GO:GO:0043234
GO:GO:0006461 GO:GO:0016055 GO:GO:0003677 GO:GO:0046849
GO:GO:0003682 GO:GO:0003705 GO:GO:0042127 GO:GO:0001077
GO:GO:0043010 GO:GO:0045670 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 GO:GO:0030318 GO:GO:0045165 GO:GO:0030316
GeneTree:ENSGT00390000004402 IPI:IPI00388904
Ensembl:ENSRNOT00000051121 ArrayExpress:F1LQV3 Uniprot:F1LQV3
Length = 510
Score = 115 (45.5 bits), Expect = 0.00091, P = 0.00091
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 309 ELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSD----K 364
EL + +S AK + + HNL ERRRR IN++++ L LIP+ N D K
Sbjct: 275 ELTACIFPTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNK 334
Query: 365 ASMLDEAIEYLKSLQLQVQ 383
++L +++Y++ LQ + Q
Sbjct: 335 GTILKASVDYIRKLQREQQ 353
>UNIPROTKB|Q60EJ4 [details] [associations]
symbol:OSJNBa0017K09.4 "Os05g0501200 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:AP008211 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000142
HOGENOM:HOG000241059 EMBL:AC130597 RefSeq:NP_001055968.1
UniGene:Os.80283 EnsemblPlants:LOC_Os05g42180.1 GeneID:4339235
KEGG:osa:4339235 eggNOG:NOG235707 ProtClustDB:CLSN2695716
Uniprot:Q60EJ4
Length = 323
Score = 112 (44.5 bits), Expect = 0.00093, P = 0.00093
Identities = 32/92 (34%), Positives = 52/92 (56%)
Query: 304 HSEDVELESADAKKQSRGS-TSAKRSRAAEVHNLSERR-RRDRINEKMRALQELIPRCNK 361
H +D S A + S GS +AK+ R + + R++++ +++ ALQ+L+ K
Sbjct: 174 HHQDAGSPSP-ATRSSPGSPAAAKKPRIEAPSPMPTFKVRKEKLGDRITALQQLVSPFGK 232
Query: 362 SDKASMLDEAIEYLKSLQLQVQMMS---MGCG 390
+D AS+L EAIEY+K L QV +S + CG
Sbjct: 233 TDTASVLHEAIEYIKFLHDQVASLSSPYLRCG 264
>ZFIN|ZDB-GENE-000509-2 [details] [associations]
symbol:arntl2 "aryl hydrocarbon receptor nuclear
translocator-like 2" species:7955 "Danio rerio" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0009648 "photoperiodism" evidence=IEP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009416 "response
to light stimulus" evidence=IGI] [GO:0007623 "circadian rhythm"
evidence=IGI] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 ZFIN:ZDB-GENE-000509-2
GO:GO:0005737 GO:GO:0003677 GO:GO:0007623 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 HOGENOM:HOG000234379 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOVERGEN:HBG107503 OrthoDB:EOG4DFPNB GO:GO:0009648
eggNOG:NOG285764 EMBL:BC128806 IPI:IPI00482035 UniGene:Dr.81323
ProteinModelPortal:A1A5T9 InParanoid:A1A5T9 ArrayExpress:A1A5T9
Uniprot:A1A5T9
Length = 631
Score = 116 (45.9 bits), Expect = 0.00094, P = 0.00094
Identities = 32/93 (34%), Positives = 50/93 (53%)
Query: 292 RKRKGRETDDEYHS-EDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMR 350
RKRKG + E S +++ + D +S K E H+ E+RRRD++N +
Sbjct: 51 RKRKGSMDNLEMKSASNLDEDMEDDAGRSEDDQHLKIKCIREPHSQIEKRRRDKMNNLID 110
Query: 351 ALQELIPRCN----KSDKASMLDEAIEYLKSLQ 379
L +IP CN K DK ++L A+++LKSL+
Sbjct: 111 ELAAMIPTCNPMSRKLDKLTVLRMAVQHLKSLK 143
>UNIPROTKB|F6UXQ5 [details] [associations]
symbol:MITF "Uncharacterized protein" species:9544 "Macaca
mulatta" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] InterPro:IPR011598
InterPro:IPR021802 InterPro:IPR024097 Pfam:PF00010 Pfam:PF11851
PROSITE:PS50888 SMART:SM00353 GO:GO:0006355 Gene3D:4.10.280.10
SUPFAM:SSF47459 PANTHER:PTHR10014 GeneTree:ENSGT00390000004402
Ensembl:ENSMMUT00000002969 Uniprot:F6UXQ5
Length = 525
Score = 115 (45.5 bits), Expect = 0.00095, P = 0.00095
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 309 ELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSD----K 364
EL + +S AK + + HNL ERRRR IN++++ L LIP+ N D K
Sbjct: 290 ELTACIFPTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNK 349
Query: 365 ASMLDEAIEYLKSLQLQVQ 383
++L +++Y++ LQ + Q
Sbjct: 350 GTILKASVDYIRKLQREQQ 368
>UNIPROTKB|G5AVQ1 [details] [associations]
symbol:GW7_02754 "Microphthalmia-associated transcription
factor" species:10181 "Heterocephalus glaber" [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] InterPro:IPR011598 InterPro:IPR021802
InterPro:IPR024097 Pfam:PF00010 Pfam:PF11851 PROSITE:PS50888
SMART:SM00353 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 EMBL:JH167167 Uniprot:G5AVQ1
Length = 525
Score = 115 (45.5 bits), Expect = 0.00095, P = 0.00095
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 309 ELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSD----K 364
EL + +S AK + + HNL ERRRR IN++++ L LIP+ N D K
Sbjct: 290 ELTACIFPTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNK 349
Query: 365 ASMLDEAIEYLKSLQLQVQ 383
++L +++Y++ LQ + Q
Sbjct: 350 GTILKASVDYIRKLQREQQ 368
>UNIPROTKB|O75030 [details] [associations]
symbol:MITF "Microphthalmia-associated transcription
factor" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0030316 "osteoclast differentiation" evidence=IEA] [GO:0042127
"regulation of cell proliferation" evidence=IEA] [GO:0043010
"camera-type eye development" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0045165 "cell
fate commitment" evidence=IEA] [GO:0045670 "regulation of
osteoclast differentiation" evidence=IEA] [GO:0046849 "bone
remodeling" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA;NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0030318 "melanocyte differentiation" evidence=NAS] [GO:0005634
"nucleus" evidence=NAS] [GO:0043234 "protein complex" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0006461 "protein complex
assembly" evidence=IDA] [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR011598 InterPro:IPR021802
InterPro:IPR024097 Pfam:PF00010 Pfam:PF11851 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0043066 GO:GO:0043234
GO:GO:0006461 GO:GO:0006355 GO:GO:0016055 GO:GO:0003677
Pathway_Interaction_DB:p38alphabetadownstreampathway GO:GO:0046849
Pathway_Interaction_DB:il6_7pathway GO:GO:0003682 GO:GO:0003705
GO:GO:0042127 GO:GO:0001077 GO:GO:0043010 GO:GO:0045670
Gene3D:4.10.280.10 SUPFAM:SSF47459
Pathway_Interaction_DB:kitpathway PANTHER:PTHR10014 GO:GO:0030318
GO:GO:0045165 GO:GO:0030316 EMBL:AB006909 EMBL:AB006989 EMBL:Z29678
EMBL:GU355676 EMBL:AL110195 EMBL:AC099326 EMBL:AC104445
EMBL:AC104449 EMBL:AC124915 EMBL:BC026961 EMBL:BC065243
EMBL:AF034755 EMBL:AB032359 EMBL:AB032358 EMBL:AB032357
EMBL:AB009608 IPI:IPI00023896 IPI:IPI00215772 IPI:IPI00217203
IPI:IPI00217204 IPI:IPI00217206 IPI:IPI00217209 IPI:IPI00217210
IPI:IPI00217211 IPI:IPI00217212 IPI:IPI00293035 IPI:IPI00853423
PIR:I38024 PIR:T14752 RefSeq:NP_000239.1 RefSeq:NP_001171896.1
RefSeq:NP_006713.1 RefSeq:NP_937801.1 RefSeq:NP_937802.1
RefSeq:NP_937820.1 RefSeq:NP_937821.2 UniGene:Hs.166017
UniGene:Hs.618266 ProteinModelPortal:O75030 SMR:O75030
DIP:DIP-59573N IntAct:O75030 STRING:O75030 PhosphoSite:O75030
PaxDb:O75030 PRIDE:O75030 Ensembl:ENST00000314557
Ensembl:ENST00000314589 Ensembl:ENST00000328528
Ensembl:ENST00000352241 Ensembl:ENST00000394351
Ensembl:ENST00000394355 Ensembl:ENST00000448226
Ensembl:ENST00000531774 GeneID:4286 KEGG:hsa:4286 UCSC:uc003dnz.3
UCSC:uc003doa.3 UCSC:uc003dob.3 UCSC:uc003doe.3 UCSC:uc003dof.3
CTD:4286 GeneCards:GC03P069788 HGNC:HGNC:7105 HPA:CAB002578
HPA:HPA003259 MIM:103470 MIM:103500 MIM:156845 MIM:193510
MIM:614456 neXtProt:NX_O75030 Orphanet:293822 Orphanet:217071
Orphanet:42665 Orphanet:895 PharmGKB:PA30823 eggNOG:NOG251286
HOGENOM:HOG000231368 HOVERGEN:HBG006768 InParanoid:O75030 KO:K09455
OMA:YSNQGLP PhylomeDB:O75030 ChEMBL:CHEMBL1741165 GenomeRNAi:4286
NextBio:16861 PMAP-CutDB:O75030 ArrayExpress:O75030 Bgee:O75030
CleanEx:HS_MITF Genevestigator:O75030 GermOnline:ENSG00000187098
Uniprot:O75030
Length = 526
Score = 115 (45.5 bits), Expect = 0.00095, P = 0.00095
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 309 ELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSD----K 364
EL + +S AK + + HNL ERRRR IN++++ L LIP+ N D K
Sbjct: 291 ELTACIFPTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNK 350
Query: 365 ASMLDEAIEYLKSLQLQVQ 383
++L +++Y++ LQ + Q
Sbjct: 351 GTILKASVDYIRKLQREQQ 369
>UNIPROTKB|F6UXW1 [details] [associations]
symbol:MITF "Uncharacterized protein" species:9544 "Macaca
mulatta" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] InterPro:IPR011598
InterPro:IPR021802 InterPro:IPR024097 Pfam:PF00010 Pfam:PF11851
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0043066
GO:GO:0043234 GO:GO:0006461 GO:GO:0016055 GO:GO:0003677
GO:GO:0046849 GO:GO:0003682 GO:GO:0003705 GO:GO:0042127
GO:GO:0001077 GO:GO:0043010 GO:GO:0045670 Gene3D:4.10.280.10
SUPFAM:SSF47459 PANTHER:PTHR10014 GO:GO:0030318 GO:GO:0045165
GO:GO:0030316 OMA:YSNQGLP GeneTree:ENSGT00390000004402
EMBL:JU334565 EMBL:CM001254 UniGene:Mmu.21196
Ensembl:ENSMMUT00000002964 Uniprot:F6UXW1
Length = 526
Score = 115 (45.5 bits), Expect = 0.00095, P = 0.00095
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 309 ELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSD----K 364
EL + +S AK + + HNL ERRRR IN++++ L LIP+ N D K
Sbjct: 291 ELTACIFPTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNK 350
Query: 365 ASMLDEAIEYLKSLQLQVQ 383
++L +++Y++ LQ + Q
Sbjct: 351 GTILKASVDYIRKLQREQQ 369
>UNIPROTKB|F7DV34 [details] [associations]
symbol:MITF "Uncharacterized protein" species:13616
"Monodelphis domestica" [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
InterPro:IPR011598 InterPro:IPR021802 InterPro:IPR024097
Pfam:PF00010 Pfam:PF11851 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0043066 GO:GO:0043234 GO:GO:0006461
GO:GO:0016055 GO:GO:0003677 GO:GO:0046849 GO:GO:0003682
GO:GO:0003705 GO:GO:0042127 GO:GO:0001077 GO:GO:0043010
GO:GO:0045670 Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
GO:GO:0030318 GO:GO:0045165 GO:GO:0030316 OMA:YSNQGLP
GeneTree:ENSGT00390000004402 Ensembl:ENSMODT00000004692
Uniprot:F7DV34
Length = 526
Score = 115 (45.5 bits), Expect = 0.00095, P = 0.00095
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 309 ELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSD----K 364
EL + +S AK + + HNL ERRRR IN++++ L LIP+ N D K
Sbjct: 291 ELTACIFPTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNK 350
Query: 365 ASMLDEAIEYLKSLQLQVQ 383
++L +++Y++ LQ + Q
Sbjct: 351 GTILKASVDYIRKLQREQQ 369
>UNIPROTKB|F7FA74 [details] [associations]
symbol:MITF "Uncharacterized protein" species:9483
"Callithrix jacchus" [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
InterPro:IPR011598 InterPro:IPR021802 InterPro:IPR024097
Pfam:PF00010 Pfam:PF11851 PROSITE:PS50888 SMART:SM00353
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
OMA:YSNQGLP GeneTree:ENSGT00390000004402 EMBL:ACFV01078258
EMBL:ACFV01078259 EMBL:ACFV01078260 EMBL:ACFV01078261
EMBL:ACFV01078262 EMBL:ACFV01078263 EMBL:ACFV01078264
EMBL:ACFV01078265 EMBL:ACFV01078266 EMBL:ACFV01078267
EMBL:ACFV01078268 EMBL:ACFV01078269 EMBL:ACFV01078270
EMBL:ACFV01078271 EMBL:ACFV01078272 Ensembl:ENSCJAT00000025827
Uniprot:F7FA74
Length = 526
Score = 115 (45.5 bits), Expect = 0.00095, P = 0.00095
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 309 ELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSD----K 364
EL + +S AK + + HNL ERRRR IN++++ L LIP+ N D K
Sbjct: 291 ELTACIFPTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNK 350
Query: 365 ASMLDEAIEYLKSLQLQVQ 383
++L +++Y++ LQ + Q
Sbjct: 351 GTILKASVDYIRKLQREQQ 369
>UNIPROTKB|G1MFG8 [details] [associations]
symbol:MITF "Uncharacterized protein" species:9646
"Ailuropoda melanoleuca" [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
InterPro:IPR011598 InterPro:IPR021802 InterPro:IPR024097
Pfam:PF00010 Pfam:PF11851 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0043066 GO:GO:0043234 GO:GO:0006461
GO:GO:0016055 GO:GO:0003677 GO:GO:0046849 GO:GO:0003682
GO:GO:0003705 GO:GO:0042127 GO:GO:0001077 GO:GO:0043010
GO:GO:0045670 Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
GO:GO:0030318 GO:GO:0045165 GO:GO:0030316 OMA:YSNQGLP
GeneTree:ENSGT00390000004402 EMBL:ACTA01195455
Ensembl:ENSAMET00000018831 Uniprot:G1MFG8
Length = 526
Score = 115 (45.5 bits), Expect = 0.00095, P = 0.00095
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 309 ELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSD----K 364
EL + +S AK + + HNL ERRRR IN++++ L LIP+ N D K
Sbjct: 291 ELTACIFPTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNK 350
Query: 365 ASMLDEAIEYLKSLQLQVQ 383
++L +++Y++ LQ + Q
Sbjct: 351 GTILKASVDYIRKLQREQQ 369
>UNIPROTKB|G1QPX2 [details] [associations]
symbol:MITF "Uncharacterized protein" species:61853
"Nomascus leucogenys" [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
InterPro:IPR011598 InterPro:IPR021802 InterPro:IPR024097
Pfam:PF00010 Pfam:PF11851 PROSITE:PS50888 SMART:SM00353
GO:GO:0043234 GO:GO:0006461 GO:GO:0001077 Gene3D:4.10.280.10
SUPFAM:SSF47459 PANTHER:PTHR10014 OMA:YSNQGLP
GeneTree:ENSGT00390000004402 EMBL:ADFV01025281 EMBL:ADFV01025282
EMBL:ADFV01025283 EMBL:ADFV01025284 EMBL:ADFV01025285
EMBL:ADFV01025286 EMBL:ADFV01025287 Ensembl:ENSNLET00000003140
Uniprot:G1QPX2
Length = 526
Score = 115 (45.5 bits), Expect = 0.00095, P = 0.00095
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 309 ELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSD----K 364
EL + +S AK + + HNL ERRRR IN++++ L LIP+ N D K
Sbjct: 291 ELTACIFPTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNK 350
Query: 365 ASMLDEAIEYLKSLQLQVQ 383
++L +++Y++ LQ + Q
Sbjct: 351 GTILKASVDYIRKLQREQQ 369
>UNIPROTKB|G1SH07 [details] [associations]
symbol:MITF "Uncharacterized protein" species:9986
"Oryctolagus cuniculus" [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
InterPro:IPR011598 InterPro:IPR021802 InterPro:IPR024097
Pfam:PF00010 Pfam:PF11851 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0043066 GO:GO:0043234 GO:GO:0006461
GO:GO:0016055 GO:GO:0003677 GO:GO:0046849 GO:GO:0003682
GO:GO:0003705 GO:GO:0042127 GO:GO:0001077 GO:GO:0043010
GO:GO:0045670 Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
GO:GO:0030318 GO:GO:0045165 GO:GO:0030316 CTD:4286 OMA:YSNQGLP
GeneTree:ENSGT00390000004402 EMBL:AAGW02044538 EMBL:AAGW02044539
EMBL:AAGW02044540 EMBL:AAGW02044541 EMBL:AAGW02044542
RefSeq:XP_002713356.1 Ensembl:ENSOCUT00000002190 GeneID:100344730
Uniprot:G1SH07
Length = 526
Score = 115 (45.5 bits), Expect = 0.00095, P = 0.00095
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 309 ELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSD----K 364
EL + +S AK + + HNL ERRRR IN++++ L LIP+ N D K
Sbjct: 291 ELTACIFPTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNK 350
Query: 365 ASMLDEAIEYLKSLQLQVQ 383
++L +++Y++ LQ + Q
Sbjct: 351 GTILKASVDYIRKLQREQQ 369
>UNIPROTKB|G3S312 [details] [associations]
symbol:MITF "Uncharacterized protein" species:9595 "Gorilla
gorilla gorilla" [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] InterPro:IPR011598
InterPro:IPR021802 InterPro:IPR024097 Pfam:PF00010 Pfam:PF11851
PROSITE:PS50888 SMART:SM00353 GO:GO:0006355 Gene3D:4.10.280.10
SUPFAM:SSF47459 PANTHER:PTHR10014 OMA:YSNQGLP
Ensembl:ENSGGOT00000022225 Uniprot:G3S312
Length = 526
Score = 115 (45.5 bits), Expect = 0.00095, P = 0.00095
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 309 ELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSD----K 364
EL + +S AK + + HNL ERRRR IN++++ L LIP+ N D K
Sbjct: 291 ELTACIFPTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNK 350
Query: 365 ASMLDEAIEYLKSLQLQVQ 383
++L +++Y++ LQ + Q
Sbjct: 351 GTILKASVDYIRKLQREQQ 369
>UNIPROTKB|G3TPP3 [details] [associations]
symbol:MITF "Uncharacterized protein" species:9785
"Loxodonta africana" [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
InterPro:IPR011598 InterPro:IPR021802 InterPro:IPR024097
Pfam:PF00010 Pfam:PF11851 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0043066 GO:GO:0043234 GO:GO:0006461
GO:GO:0016055 GO:GO:0003677 GO:GO:0046849 GO:GO:0003682
GO:GO:0003705 GO:GO:0042127 GO:GO:0001077 GO:GO:0043010
GO:GO:0045670 Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
GO:GO:0030318 GO:GO:0045165 GO:GO:0030316 OMA:YSNQGLP
GeneTree:ENSGT00390000004402 Ensembl:ENSLAFT00000022841
Uniprot:G3TPP3
Length = 526
Score = 115 (45.5 bits), Expect = 0.00095, P = 0.00095
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 309 ELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSD----K 364
EL + +S AK + + HNL ERRRR IN++++ L LIP+ N D K
Sbjct: 291 ELTACIFPTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNK 350
Query: 365 ASMLDEAIEYLKSLQLQVQ 383
++L +++Y++ LQ + Q
Sbjct: 351 GTILKASVDYIRKLQREQQ 369
>UNIPROTKB|G3WZ06 [details] [associations]
symbol:MITF "Uncharacterized protein" species:9305
"Sarcophilus harrisii" [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
InterPro:IPR011598 InterPro:IPR021802 InterPro:IPR024097
Pfam:PF00010 Pfam:PF11851 PROSITE:PS50888 SMART:SM00353
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
OMA:YSNQGLP GeneTree:ENSGT00390000004402 EMBL:AEFK01083901
EMBL:AEFK01083902 EMBL:AEFK01083903 EMBL:AEFK01083904
EMBL:AEFK01083905 EMBL:AEFK01083906 EMBL:AEFK01083907
EMBL:AEFK01083908 EMBL:AEFK01083909 EMBL:AEFK01083910
EMBL:AEFK01083911 EMBL:AEFK01083912 EMBL:AEFK01083913
EMBL:AEFK01083914 EMBL:AEFK01083915 EMBL:AEFK01083916
Ensembl:ENSSHAT00000020826 Uniprot:G3WZ06
Length = 526
Score = 115 (45.5 bits), Expect = 0.00095, P = 0.00095
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 309 ELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSD----K 364
EL + +S AK + + HNL ERRRR IN++++ L LIP+ N D K
Sbjct: 291 ELTACIFPTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNK 350
Query: 365 ASMLDEAIEYLKSLQLQVQ 383
++L +++Y++ LQ + Q
Sbjct: 351 GTILKASVDYIRKLQREQQ 369
>UNIPROTKB|G7NZ88 [details] [associations]
symbol:EGM_10525 "Putative uncharacterized protein"
species:9541 "Macaca fascicularis" [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
InterPro:IPR011598 InterPro:IPR021802 InterPro:IPR024097
Pfam:PF00010 Pfam:PF11851 PROSITE:PS50888 SMART:SM00353
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
EMBL:CM001277 Uniprot:G7NZ88
Length = 526
Score = 115 (45.5 bits), Expect = 0.00095, P = 0.00095
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 309 ELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSD----K 364
EL + +S AK + + HNL ERRRR IN++++ L LIP+ N D K
Sbjct: 291 ELTACIFPTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNK 350
Query: 365 ASMLDEAIEYLKSLQLQVQ 383
++L +++Y++ LQ + Q
Sbjct: 351 GTILKASVDYIRKLQREQQ 369
>UNIPROTKB|H0VS91 [details] [associations]
symbol:MITF "Uncharacterized protein" species:10141 "Cavia
porcellus" [GO:0045944 "positive regulation of transcription from
RNA polymerase II promoter" evidence=ISS] InterPro:IPR011598
InterPro:IPR021802 InterPro:IPR024097 Pfam:PF00010 Pfam:PF11851
PROSITE:PS50888 SMART:SM00353 GO:GO:0006355 Gene3D:4.10.280.10
SUPFAM:SSF47459 PANTHER:PTHR10014 OMA:YSNQGLP
GeneTree:ENSGT00390000004402 EMBL:AAKN02022026 EMBL:AAKN02022027
EMBL:AAKN02022028 Ensembl:ENSCPOT00000015109 Uniprot:H0VS91
Length = 526
Score = 115 (45.5 bits), Expect = 0.00095, P = 0.00095
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 309 ELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSD----K 364
EL + +S AK + + HNL ERRRR IN++++ L LIP+ N D K
Sbjct: 291 ELTACIFPTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNK 350
Query: 365 ASMLDEAIEYLKSLQLQVQ 383
++L +++Y++ LQ + Q
Sbjct: 351 GTILKASVDYIRKLQREQQ 369
>UNIPROTKB|K6ZEW7 [details] [associations]
symbol:MITF "Microphthalmia-associated transcription
factor" species:9598 "Pan troglodytes" [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] InterPro:IPR011598 InterPro:IPR021802
InterPro:IPR024097 Pfam:PF00010 Pfam:PF11851 PROSITE:PS50888
SMART:SM00353 Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
EMBL:GABC01008132 EMBL:GABF01004511 EMBL:GABE01009020
Uniprot:K6ZEW7
Length = 526
Score = 115 (45.5 bits), Expect = 0.00095, P = 0.00095
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 309 ELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSD----K 364
EL + +S AK + + HNL ERRRR IN++++ L LIP+ N D K
Sbjct: 291 ELTACIFPTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNK 350
Query: 365 ASMLDEAIEYLKSLQLQVQ 383
++L +++Y++ LQ + Q
Sbjct: 351 GTILKASVDYIRKLQREQQ 369
>MGI|MGI:104554 [details] [associations]
symbol:Mitf "microphthalmia-associated transcription factor"
species:10090 "Mus musculus" [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IC;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0006461 "protein complex assembly" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0010468 "regulation of gene expression" evidence=IMP]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IDA]
[GO:0030154 "cell differentiation" evidence=IMP] [GO:0030316
"osteoclast differentiation" evidence=IMP] [GO:0030318 "melanocyte
differentiation" evidence=IGI;IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IDA] [GO:0042981 "regulation of apoptotic
process" evidence=IDA] [GO:0043010 "camera-type eye development"
evidence=IGI] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043234 "protein complex" evidence=ISO]
[GO:0043473 "pigmentation" evidence=IGI;IMP] [GO:0043565
"sequence-specific DNA binding" evidence=ISA] [GO:0045165 "cell
fate commitment" evidence=IMP] [GO:0045670 "regulation of
osteoclast differentiation" evidence=IGI;IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO;IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IGI;ISS;IDA] [GO:0046849 "bone
remodeling" evidence=IMP] [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR011598 InterPro:IPR021802
InterPro:IPR024097 Pfam:PF00010 Pfam:PF11851 PROSITE:PS50888
SMART:SM00353 MGI:MGI:104554 GO:GO:0005634 GO:GO:0043066
GO:GO:0016055 GO:GO:0046849 GO:GO:0043565 GO:GO:0045944
GO:GO:0003682 GO:GO:0003705 GO:GO:0042127 GO:GO:0043010
GO:GO:0045670 Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
GO:GO:0030318 GO:GO:0045165 GO:GO:0030316 CTD:4286 eggNOG:NOG251286
HOVERGEN:HBG006768 KO:K09455 EMBL:Z23066 EMBL:AF222344
EMBL:AF222959 EMBL:AF222949 EMBL:AF222951 EMBL:AF222953
EMBL:AF222954 EMBL:AF222955 EMBL:AF222956 EMBL:AF222957
EMBL:AF222958 EMBL:AF222950 EMBL:AF222952 EMBL:U19874 EMBL:U19875
EMBL:L22958 EMBL:AB009397 IPI:IPI00125758 IPI:IPI00230195
IPI:IPI00230196 IPI:IPI00230197 IPI:IPI00230198 IPI:IPI00230199
IPI:IPI00230200 IPI:IPI00230201 IPI:IPI00230202 PIR:A40728
PIR:I49244 PIR:PD0026 RefSeq:NP_032627.1 UniGene:Mm.333284
UniGene:Mm.454504 PDB:4ATH PDB:4ATI PDB:4ATK PDBsum:4ATH
PDBsum:4ATI PDBsum:4ATK ProteinModelPortal:Q08874 SMR:Q08874
IntAct:Q08874 STRING:Q08874 PhosphoSite:Q08874 PaxDb:Q08874
PRIDE:Q08874 Ensembl:ENSMUST00000043628 GeneID:17342 KEGG:mmu:17342
InParanoid:Q08874 OrthoDB:EOG495ZRR ChEMBL:CHEMBL1075142
ChiTaRS:MITF NextBio:291916 Bgee:Q08874 CleanEx:MM_MITF
CleanEx:MM_VIT Genevestigator:Q08874 GermOnline:ENSMUSG00000035158
Uniprot:Q08874
Length = 526
Score = 115 (45.5 bits), Expect = 0.00095, P = 0.00095
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 309 ELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSD----K 364
EL + +S AK + + HNL ERRRR IN++++ L LIP+ N D K
Sbjct: 291 ELTACIFPTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNK 350
Query: 365 ASMLDEAIEYLKSLQLQVQ 383
++L +++Y++ LQ + Q
Sbjct: 351 GTILKASVDYIRKLQREQQ 369
>UNIPROTKB|Q9IAU0 [details] [associations]
symbol:MITF "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 InterPro:IPR021802
InterPro:IPR024097 Pfam:PF00010 Pfam:PF11851 PROSITE:PS50888
SMART:SM00353 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 HSSP:P22415 HOGENOM:HOG000231368
HOVERGEN:HBG006768 GeneTree:ENSGT00390000004402 EMBL:AADN02014354
EMBL:AADN02014355 UniGene:Gga.275 EMBL:AF145751 IPI:IPI00574386
STRING:Q9IAU0 Ensembl:ENSGALT00000036222 Uniprot:Q9IAU0
Length = 385
Score = 113 (44.8 bits), Expect = 0.00098, P = 0.00098
Identities = 25/70 (35%), Positives = 41/70 (58%)
Query: 318 QSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSD----KASMLDEAIE 373
+S AK + + HNL ERRRR IN++++ L LIP+ N D K ++L +++
Sbjct: 159 ESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVD 218
Query: 374 YLKSLQLQVQ 383
Y++ LQ + Q
Sbjct: 219 YIRKLQREQQ 228
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.126 0.368 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 423 334 0.00091 116 3 11 23 0.44 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 226
No. of states in DFA: 622 (66 KB)
Total size of DFA: 234 KB (2127 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.58u 0.12s 30.70t Elapsed: 00:00:01
Total cpu time: 30.59u 0.12s 30.71t Elapsed: 00:00:01
Start: Sat May 11 00:37:32 2013 End: Sat May 11 00:37:33 2013
WARNINGS ISSUED: 1