BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014485
(423 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GZM7|PIF1_ARATH Transcription factor PIF1 OS=Arabidopsis thaliana GN=PIF1 PE=1 SV=1
Length = 478
Score = 273 bits (698), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 205/426 (48%), Positives = 256/426 (60%), Gaps = 73/426 (17%)
Query: 1 MNHCVPDFEFDDDHSIPTSSVLNR-PRKS--AMAEED-VMELLWQNGPVVLHNQNQRSLK 56
M+H VPDF+ DDD+ +S LN PRKS M E+D +MELLWQNG VV+ QNQR L
Sbjct: 1 MHHFVPDFDTDDDYVNNHNSSLNHLPRKSITTMGEDDDLMELLWQNGQVVV--QNQR-LH 57
Query: 57 KSQPSFPADQSAPREIPSSHHHQQEQQD-HLFMQEDEMASWLHYPLNDTNFDSDFCTDLL 115
+PS S P+ +PS QQ D +LF+QEDEM SWLHYPL D DFC+DLL
Sbjct: 58 TKKPS----SSPPKLLPSMDPQQQPSSDQNLFIQEDEMTSWLHYPLRD----DDFCSDLL 109
Query: 116 YPAPCITSTTTTTATATAT-PPVRATRVRDSRPQLNTATTVASAPPLRPPIPPPPRRTEN 174
+ A + T T + TA PPV ++T S PP+R N
Sbjct: 110 FSAAPTATATATVSQVTAARPPV--------------SSTNESRPPVR-----------N 144
Query: 175 FGLFAR-----HMPREVASGPSNSKSVTIRESTVVDSSDTPAPGPDSRASEAMRSMEGAS 229
F F+R + R SGP SK+V +REST V S TP+ + ASE S
Sbjct: 145 FMNFSRLRGDFNNGRGGESGPLLSKAV-VRESTQVSPSATPS----AAASE--------S 191
Query: 230 GVNNNNRCRNTSGAGAAATSSGGG---GGSSGARDLTMCEMTVTSSPGGSSASAEPPAQK 286
G+ R T G ++A + GG G + A E+T TSS S + EP +K
Sbjct: 192 GL-----TRRTDGTDSSAVAGGGAYNRKGKAVAMTAPAIEITGTSSSVVSKSEIEP--EK 244
Query: 287 PAAEDRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRIN 346
+DRKRK RE +++ E S + K+ +TS KRSRAAEVHNLSER+RRDRIN
Sbjct: 245 TNVDDRKRKEREATT---TDETESRSEETKQARVSTTSTKRSRAAEVHNLSERKRRDRIN 301
Query: 347 EKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQYMPNM 406
E+M+ALQELIPRCNKSDKASMLDEAIEY+KSLQLQ+QMMSMGCG++PMM+PG+QQYMP+M
Sbjct: 302 ERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMSMGCGMMPMMYPGMQQYMPHM 361
Query: 407 GMGIGM 412
MG+GM
Sbjct: 362 AMGMGM 367
>sp|Q9SVU7|BH056_ARATH Putative transcription factor bHLH056 OS=Arabidopsis thaliana
GN=BHLH56 PE=4 SV=2
Length = 445
Score = 167 bits (423), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 149/393 (37%), Positives = 194/393 (49%), Gaps = 97/393 (24%)
Query: 32 EEDVMELLWQNGPVVLHNQNQRS------LKKSQPSFPADQSAPREIPSSHHHQQEQQDH 85
E+D++ELLWQ+G VV NQ R + + S +++AP P H HQQ +
Sbjct: 19 EDDIVELLWQSGQVVGTNQTHRQSYDPPPILRGSGSGRGEENAPLSQPPPHLHQQ----N 74
Query: 86 LFMQEDEMASWLHYPLNDTNFDSDFCTDLLYPAPCITSTTTTTATATATPPVRATRVRDS 145
LF+QE EM SWLH+ N+ FC++LL P AT P S
Sbjct: 75 LFIQEGEMYSWLHHSYRQ-NY---FCSELLNSTP-------------ATHP-------QS 110
Query: 146 RPQLNTATTVASAPPLRPPIPPPPRRTENFGLFARHMP------REVASGPSNSKSVTIR 199
L T+A+ RR ENF F+ R +GPS S +R
Sbjct: 111 SISLAPRQTIAT------------RRAENFMNFSWLRGNIFTGGRVDEAGPSFS---VVR 155
Query: 200 ESTVVDSSDTPAPGPDSRASEA--MRSMEG-ASGVNNNNRCRNTSGAGAAATSSGGGGGS 256
ES V S+ TP P S A+E+ + + EG AS V+ + G A G S
Sbjct: 156 ESMQVGSNTTP---PSSSATESCVIPATEGTASRVSGTLAAHDLGRKGKAVAVEAAGTPS 212
Query: 257 SGARDLTMCEMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRETDDEYHSEDVELESADAK 316
SG +C+ A EP +PA E K K RE E H
Sbjct: 213 SG-----VCK-----------AETEPVQIQPATES-KLKARE---ETH----------GT 242
Query: 317 KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLK 376
+++RGSTS KRSR AE+HNL+ERRRR++INEKM+ LQ+LIPRCNKS K S LD+AIEY+K
Sbjct: 243 EEARGSTSRKRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKSTKVSTLDDAIEYVK 302
Query: 377 SLQLQVQMMSMGCGVVPMMFPG-VQQYMPNMGM 408
SLQ Q+Q M + PMM G QQ+MP+M M
Sbjct: 303 SLQSQIQGM-----MSPMMNAGNTQQFMPHMAM 330
>sp|Q9SVU6|BH023_ARATH Transcription factor bHLH23 OS=Arabidopsis thaliana GN=BHLH23 PE=2
SV=1
Length = 413
Score = 166 bits (421), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 145/409 (35%), Positives = 194/409 (47%), Gaps = 81/409 (19%)
Query: 22 LNRPRKSAMAEEDVMELLWQNGPVVLHNQNQR-------SLKKSQPSFPADQSAPREIPS 74
L P K M E+D++ELL ++ VV +Q Q L+ S + P
Sbjct: 14 LISPEKYIMGEDDIVELLGKSSQVVTSSQTQTPSCDPPLILRGSGSGDGEGNGPLPQPPP 73
Query: 75 SHHHQQEQQDHLFMQEDEMASWLHYPLNDTNFDSDFCTDLLYPAPCITSTTTTTATATAT 134
+HQQ LF+QEDEMASWLH P N + LLY ++ + A+
Sbjct: 74 PLYHQQS----LFIQEDEMASWLHQP----NRQDYLYSQLLYSG-VASTHPQSLASLEPP 124
Query: 135 PPVRATRVRDS-RPQLNTATTVASAPPLRPPIPPPPRRTENFGLFARHMPREVASG---- 189
PP RA + + RP T +A RR ENF +R G
Sbjct: 125 PPPRAQYILAADRP---TGHILAE------------RRAENFMNISRQRGNIFLGGVEAV 169
Query: 190 PSNSKSVTIRESTVVDSSDTPAPGPDSRASEAMRSMEGASGVNNNNRCRNTSGAGAAATS 249
PSN ST++ S+ P + R T G + T
Sbjct: 170 PSN--------STLLSSATESIPA------------------THGTESRATVTGGVSRTF 203
Query: 250 SGGGGGSSGARDLTMCEMTVTSSPGGSSASAEPPAQKPAAE-----DRKRKGRETDDEYH 304
+ G G G E T S G A EP ++PA E +RKRK RE E +
Sbjct: 204 AVPGLGPRG--KAVAIETAGTQSWGLCKAETEPVQRQPATETDITDERKRKTRE---ETN 258
Query: 305 SEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDK 364
E+ +++R STS+KRSRAA +H LSERRRR +INE M+ALQEL+PRC K+D+
Sbjct: 259 VEN------QGTEEARDSTSSKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTKTDR 312
Query: 365 ASMLDEAIEYLKSLQLQVQMMSMGCGVV-PMMFPG--VQQYMPNMGMGI 410
+SMLD+ IEY+KSLQ Q+QM SMG ++ PMM+ G QQYMP+M MG+
Sbjct: 313 SSMLDDVIEYVKSLQSQIQMFSMGHVMIPPMMYAGNIQQQYMPHMAMGM 361
>sp|O80536|PIF3_ARATH Transcription factor PIF3 OS=Arabidopsis thaliana GN=PIF3 PE=1 SV=1
Length = 524
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/144 (59%), Positives = 100/144 (69%), Gaps = 7/144 (4%)
Query: 266 EMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRETDDEYHSEDVELESADAKKQ---SRGS 322
E V S GS S + P++ P+ +++ D + HSEDVE ES D +K+ SR
Sbjct: 277 EKAVVCSSVGSGNSLDGPSESPSLSLKRKHSNIQDIDCHSEDVEEESGDGRKEAGPSRTG 336
Query: 323 TSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQV 382
+KRSR+AEVHNLSERRRRDRINEKMRALQELIP CNK DKASMLDEAIEYLKSLQLQV
Sbjct: 337 LGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQV 396
Query: 383 QMMSMGCGVV---PMMF-PGVQQY 402
Q+MSM G +MF PG+ Y
Sbjct: 397 QIMSMASGYYLPPAVMFPPGMGHY 420
>sp|Q8GT73|BH119_ARATH Transcription factor bHLH119 OS=Arabidopsis thaliana GN=BHLH119
PE=2 SV=2
Length = 544
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 146/410 (35%), Positives = 200/410 (48%), Gaps = 64/410 (15%)
Query: 17 PTSSV-LNRPRKSAMAEEDVMELLWQNGPVVLHNQNQRSLKKSQPSFPADQSAPRE---- 71
P SSV L P A +E+DV+ELLW++G VV Q QR + P F S E
Sbjct: 92 PQSSVSLPPPPPIAPSEDDVVELLWKSGQVVQSIQTQRPIPP--PIFRGSGSGGGEETVL 149
Query: 72 -IPSSHHHQQEQQDHLFMQEDEMASWLHYPLNDTNFDSDFCTDLLYPAPCITSTTTTTAT 130
+P H Q ++F+QEDEMASWL++PL F S + ST+ T
Sbjct: 150 PLPPLHPSHQ----NIFIQEDEMASWLYHPLRQDYFSSG-----------VASTSATRPQ 194
Query: 131 ATATPPVRATRVRDSRPQLNTATTVASAPPLRPPIPPPPRRTENFGLFARHMPREVASGP 190
++A+ Q+ P RRTENF F R + G
Sbjct: 195 SSASLAPTPPPPSVPYGQI-----------------PVERRTENFMNFLRLRGNIFSGGR 237
Query: 191 SNSKSVTIRESTVVDSSDTPAPGPDSRASEAMRSMEGASGVNNNNRCRNTSGAGAAATSS 250
+ V I EST + SS + + + R + G + T +
Sbjct: 238 VEAGPVVI-ESTQIGSSA---------TPSSSAAESCVIPATHGTESRAAAITGVSRTFA 287
Query: 251 GGGGGSSGARDLTMCEMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRETDDEYHSEDVEL 310
G G G T E TS G + A E +P +R+ + T+D+ E +
Sbjct: 288 VPGLGRRGKEVAT--ETAGTSYSGVNKAETERVQIQP-----ERETKITEDKKREETIA- 339
Query: 311 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDE 370
+++ GSTS KRSRAA++HNLSERRRR+RINE+M+ LQEL+PRC K+DK SML++
Sbjct: 340 -EIQGTEEAHGSTSRKRSRAADMHNLSERRRRERINERMKTLQELLPRCRKTDKVSMLED 398
Query: 371 AIEYLKSLQLQVQMMSMGCGVVPMMFP--GVQQYMPNMGMGIGMGMGMGR 418
IEY+KSLQLQ+QMMSMG G++P M QQ+MP+M MG+ GM R
Sbjct: 399 VIEYVKSLQLQIQMMSMGHGMMPPMMHEGNTQQFMPHMAMGM---KGMNR 445
Score = 45.4 bits (106), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 11/80 (13%)
Query: 30 MAEEDVMELLWQNGPVVLHNQNQR-SLKKSQPSFP---------ADQSAPREIPSSHHHQ 79
M E+D++ELLW NG VV +Q QR S K P+ P +++AP +P +
Sbjct: 1 MGEDDIVELLW-NGQVVRTSQPQRPSSGKPSPTPPILRGSGSGSGEENAPLPLPLLQPPR 59
Query: 80 QEQQDHLFMQEDEMASWLHY 99
+LF++E+EM+SWLHY
Sbjct: 60 PLHHQNLFIREEEMSSWLHY 79
>sp|Q8L5W8|PIL1_ARATH Transcription factor PIL1 OS=Arabidopsis thaliana GN=PIL1 PE=1 SV=1
Length = 416
Score = 122 bits (307), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 88/131 (67%), Gaps = 12/131 (9%)
Query: 293 KRKGRETDDE---YHSEDVELESADAKKQSRGSTS---AKRSRAAEVHNLSERRRRDRIN 346
KRK + ++E Y S + + ES DAK Q T KR R+ EVH L ER+RRD N
Sbjct: 187 KRKYGDIEEEESTYLSNNSDDESDDAKTQVHARTRKPVTKRKRSTEVHKLYERKRRDEFN 246
Query: 347 EKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVV--PMMFPGVQQYMP 404
+KMRALQ+L+P C K DKAS+LDEAI+Y+++LQLQVQMMSMG G++ P M P + Y P
Sbjct: 247 KKMRALQDLLPNCYKDDKASLLDEAIKYMRTLQLQVQMMSMGNGLIRPPTMLP-MGHYSP 305
Query: 405 NMGMGIGMGMG 415
MG+GM MG
Sbjct: 306 ---MGLGMHMG 313
>sp|Q84LH8|PIF5_ARATH Transcription factor PIF5 OS=Arabidopsis thaliana GN=PIF5 PE=1 SV=1
Length = 444
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/140 (56%), Positives = 97/140 (69%), Gaps = 16/140 (11%)
Query: 291 DRKRKG-RETDDEYHSE-DVELESAD----AKKQSRGSTSAKRSRAAEVHNLSERRRRDR 344
DRKRK + D E S+ D+ L S D K S+ S S +RSRAAEVHNLSERRRRDR
Sbjct: 212 DRKRKHVMDADQESVSQSDIGLTSTDDQTMGNKSSQRSGSTRRSRAAEVHNLSERRRRDR 271
Query: 345 INEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVV--------PMMF 396
INE+M+ALQELIP C+++DKAS+LDEAI+YLKSLQ+Q+Q+M MG G+ PMMF
Sbjct: 272 INERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQLQVMWMGSGMAAAAAAAASPMMF 331
Query: 397 PGVQQ--YMPNMGMGIGMGM 414
PGVQ Y+ M M M +
Sbjct: 332 PGVQSSPYINQMAMQSQMQL 351
Score = 41.6 bits (96), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 17/110 (15%)
Query: 1 MNHCVPDFEFDDDHSIPTSSVLNRPRKSAMAEEDVMELLWQNGPVVLHNQNQRSLKKSQP 60
M D+ F+D+ + T+ ++S E++++ELLW++G VVL +Q +R +P
Sbjct: 1 MEQVFADWNFEDNFHMSTN------KRSIRPEDELVELLWRDGQVVLQSQARR-----EP 49
Query: 61 SFPADQS------APREIPSSHHHQQEQQDHLFMQEDEMASWLHYPLNDT 104
S P I + ++ ++ + + E SW+ YP +D
Sbjct: 50 SVQVQTHKQETLRKPNNIFLDNQETVQKPNYAALDDQETVSWIQYPPDDV 99
>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1
SV=1
Length = 373
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/72 (73%), Positives = 60/72 (83%), Gaps = 2/72 (2%)
Query: 329 RAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSM- 387
RAAEVHNLSE+RRR RINEKM+ALQ LIP NK+DKASMLDEAIEYLK LQLQVQM++M
Sbjct: 197 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMR 256
Query: 388 -GCGVVPMMFPG 398
G + P+ PG
Sbjct: 257 NGINLHPLCLPG 268
>sp|Q7XHI7|BH127_ARATH Transcription factor bHLH127 OS=Arabidopsis thaliana GN=BHLH127
PE=2 SV=1
Length = 307
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/94 (54%), Positives = 70/94 (74%), Gaps = 17/94 (18%)
Query: 317 KQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLK 376
+++RGSTS KRSRAAE+HNL+ERRRR++INE+M+ LQ+LIPRCNKS K SML++ IEY+K
Sbjct: 138 EEARGSTSRKRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKSTKVSMLEDVIEYVK 197
Query: 377 SLQLQVQMMSMGCGVVPMMFPGVQQYMPNMGMGI 410
SL++Q + Q+MP+M MG+
Sbjct: 198 SLEMQ-----------------INQFMPHMAMGM 214
Score = 37.7 bits (86), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
Query: 31 AEEDVMELLWQNGPVVLHNQNQRSLKKSQPSFPADQSAPREIPSSHHHQQEQQDHLFMQE 90
E+D++ELL + G + + + + + S +++ P P H +LF+QE
Sbjct: 22 GEDDIVELLCKIGQTQIPSSDPLPILRGSGSGGREENTPLPPPLPH-------QNLFIQE 74
Query: 91 DEMASWLHYPLNDTNFDSDFCTDLLY---PAP 119
DEM+SW H+PL D+ LY PAP
Sbjct: 75 DEMSSWPHHPLRQ-----DYLCSELYASTPAP 101
>sp|Q9FHA2|ALC_ARATH Transcription factor ALC OS=Arabidopsis thaliana GN=ALC PE=2 SV=1
Length = 210
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/78 (64%), Positives = 62/78 (79%), Gaps = 2/78 (2%)
Query: 324 SAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQ 383
S KR+ A+ HNLSE++RR +INEKM+ALQ+LIP NK+DKASMLDEAIEYLK LQLQVQ
Sbjct: 88 SLKRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQ 147
Query: 384 MMSM--GCGVVPMMFPGV 399
+++ G G+ PM P V
Sbjct: 148 TLAVMNGLGLNPMRLPQV 165
>sp|Q8GZ38|UNE10_ARATH Transcription factor UNE10 OS=Arabidopsis thaliana GN=UNE10 PE=2
SV=1
Length = 399
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 61/87 (70%)
Query: 300 DDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRC 359
D HS + + K + S S KRSRAA +HN SER+RRD+IN++M+ LQ+L+P
Sbjct: 184 DSVCHSRPQMEDEEEKKAGGKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNS 243
Query: 360 NKSDKASMLDEAIEYLKSLQLQVQMMS 386
+K+DKASMLDE IEYLK LQ QV MMS
Sbjct: 244 SKTDKASMLDEVIEYLKQLQAQVSMMS 270
Score = 33.1 bits (74), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Query: 1 MNHCVPDFEFDDDHSIPTSSVLNRPRKSA---MAEEDVMELLWQNGPVVLH 48
M+ CVP+ DD + T++V R +A + + +V EL W+NG + LH
Sbjct: 1 MSQCVPNCHIDDTPAAATTTV--RSTTAADIPILDYEVAELTWENGQLGLH 49
>sp|Q8L5W7|PIF6_ARATH Transcription factor PIF6 OS=Arabidopsis thaliana GN=PIF6 PE=1 SV=1
Length = 363
Score = 92.4 bits (228), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 62/100 (62%), Gaps = 3/100 (3%)
Query: 325 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 384
KR R AE +N ER +R+ IN+KMR LQ L+P +K D SMLDEAI Y+ +LQLQVQM
Sbjct: 184 VKRKRNAEAYNSPERNQRNDINKKMRTLQNLLPNSHKDDNESMLDEAINYMTNLQLQVQM 243
Query: 385 MSMGCGVV--PMMFPGVQQYMPNMGMGIGMGMGMGRAWIW 422
M+MG V MM P Y MG+ +G+GM MG
Sbjct: 244 MTMGNRFVTPSMMMPLGPNY-SQMGLAMGVGMQMGEQQFL 282
>sp|Q9ZUG9|BH066_ARATH Transcription factor bHLH66 OS=Arabidopsis thaliana GN=BHLH66 PE=2
SV=1
Length = 350
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 57/70 (81%)
Query: 318 QSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKS 377
QSR A+R +A + H+++ER RR+RI E+M+ALQEL+P NK+DKASMLDE I+Y+K
Sbjct: 133 QSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKF 192
Query: 378 LQLQVQMMSM 387
LQLQV+++SM
Sbjct: 193 LQLQVKVLSM 202
>sp|Q8S3D5|BH069_ARATH Transcription factor bHLH69 OS=Arabidopsis thaliana GN=BHLH69 PE=2
SV=2
Length = 310
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 60/75 (80%)
Query: 313 ADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAI 372
A A+ Q++ A+R +A + H+++ER RR+RI E+M++LQEL+P NK+DKASMLDE I
Sbjct: 120 ATAQPQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEII 179
Query: 373 EYLKSLQLQVQMMSM 387
+Y+K LQLQV+++SM
Sbjct: 180 DYVKFLQLQVKVLSM 194
>sp|Q9LSQ3|BH082_ARATH Transcription factor bHLH82 OS=Arabidopsis thaliana GN=BHLH82 PE=2
SV=1
Length = 297
Score = 85.9 bits (211), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 54/63 (85%)
Query: 325 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 384
A+R +A + H+++ER RR+RI E+M++LQEL+P NK+DKASMLDE IEY++ LQLQV++
Sbjct: 101 ARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQLQVKV 160
Query: 385 MSM 387
+SM
Sbjct: 161 LSM 163
>sp|Q93W88|BH137_ARATH Transcription factor bHLH137 OS=Arabidopsis thaliana GN=BHLH137
PE=2 SV=1
Length = 286
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 83/148 (56%), Gaps = 19/148 (12%)
Query: 264 MCEMTVTSSPGGSSA---SAEPPAQKPAAEDRKRKGRETDDEYHSEDVELESADAKKQSR 320
+ T T++ G SS S P A + R RK R +++ +E +KKQ R
Sbjct: 68 LANTTKTATTGSSSCDQLSHGPSAITNTGKTRGRKARNSNNSKEG----VEGRKSKKQKR 123
Query: 321 GS----------TSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLD 369
GS A+R +A + H+L+ER RR++I+E+MR LQ L+P C+K + KA MLD
Sbjct: 124 GSKEEPPTDYIHVRARRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLD 183
Query: 370 EAIEYLKSLQLQVQMMSMGC-GVVPMMF 396
E I Y+++LQ QV+ +SM + P+++
Sbjct: 184 EIINYVQTLQTQVEFLSMKLTSISPVVY 211
>sp|Q6NKN9|BH074_ARATH Transcription factor bHLH74 OS=Arabidopsis thaliana GN=BHLH74 PE=2
SV=1
Length = 366
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Query: 311 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLD 369
+S +A K++ A+R +A H+L+ER RR++I+E+MR LQEL+P CNK + KA MLD
Sbjct: 194 QSEEAPKENYIHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLD 253
Query: 370 EAIEYLKSLQLQVQMMSMGCGVV 392
E I Y++SLQ QV+ +SM V
Sbjct: 254 EIINYVQSLQQQVEFLSMKLATV 276
>sp|Q9FE22|HFR1_ARATH Transcription factor HFR1 OS=Arabidopsis thaliana GN=HFR1 PE=1 SV=1
Length = 292
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 72/141 (51%), Gaps = 29/141 (20%)
Query: 298 ETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEV------------------HNLSER 339
ETDD +H +D E +D + R + R +V S+R
Sbjct: 85 ETDDHHHIKDFS-ERSDHRFYLRNKHENPKKRRIQVLSSDDESEEFTREVPSVTRKGSKR 143
Query: 340 RRRD-RINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVPMMFPG 398
RRRD +++ KMR LQ+L+P C+K+DK S+LD+ IEY+K+LQLQ+QMMS GV P P
Sbjct: 144 RRRDEKMSNKMRKLQQLVPNCHKTDKVSVLDKTIEYMKNLQLQLQMMS-TVGVNPYFLPA 202
Query: 399 VQQYMPNMGMGIGMGMGMGRA 419
+G GM M A
Sbjct: 203 T--------LGFGMHNHMLTA 215
>sp|Q9CAA9|BH049_ARATH Transcription factor bHLH49 OS=Arabidopsis thaliana GN=BHLH49 PE=2
SV=1
Length = 486
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 99/216 (45%), Gaps = 40/216 (18%)
Query: 190 PSNSKSVTIRESTVVDSSDTPAPGPDSRASEAMRSMEGASGVNNNNRCRNTSGAGAAA-- 247
P N SV ++ESTV R+SE + N G+G +
Sbjct: 185 PHNDVSVAVKESTV-------------RSSEQAKP--------------NVPGSGNVSED 217
Query: 248 TSSGGGGGSSGARDLTMCEMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRETDDEYHSED 307
T S GG G G + + + S A+ +Q+ E + +DE
Sbjct: 218 TQSSGGNGQKGRETSSNTKKRKRNGQKNSEAAQSHRSQQSEEEPDNNGDEKRNDEQSPNS 277
Query: 308 VELESADAKKQSRGSTS----------AKRSRAAEVHNLSERRRRDRINEKMRALQELIP 357
+S K+Q + S+ A+R +A H+L+ER RR++I+E+M+ LQ+L+P
Sbjct: 278 PGKKSNSGKQQGKQSSDPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVP 337
Query: 358 RCNK-SDKASMLDEAIEYLKSLQLQVQMMSMGCGVV 392
CNK + KA MLDE I Y++SLQ QV+ +SM V
Sbjct: 338 GCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATV 373
>sp|Q570R7|PIF7_ARATH Transcription factor PIF7 OS=Arabidopsis thaliana GN=BHLH72 PE=1
SV=2
Length = 366
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 70/108 (64%), Gaps = 8/108 (7%)
Query: 291 DRKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMR 350
D R G ET D +E E E+ + G ++ +R RAA +HN SERRRRDRIN++MR
Sbjct: 135 DYFRSGSETQD---TEGDEQET----RGEAGRSNGRRGRAAAIHNESERRRRDRINQRMR 187
Query: 351 ALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGV-VPMMFP 397
LQ+L+P +K+DK S+LD+ IE+LK LQ QVQ MS+ + MM P
Sbjct: 188 TLQKLLPTASKADKVSILDDVIEHLKQLQAQVQFMSLRANLPQQMMIP 235
>sp|Q9SRT2|BH062_ARATH Transcription factor bHLH62 OS=Arabidopsis thaliana GN=BHLH62 PE=2
SV=1
Length = 456
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 77/141 (54%), Gaps = 9/141 (6%)
Query: 253 GGGSSGARDLTMCEMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRETDDEYHSEDVELES 312
G SSG + +SP S+S E ++ + R +K E D+ S D +
Sbjct: 196 AGESSGELSRKRKTKSKQNSPSAVSSSKEIEEKEDSDPKRCKKSEENGDKTKSIDPYKDY 255
Query: 313 ADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEA 371
+ A+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK + KA MLDE
Sbjct: 256 IHVR--------ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEI 307
Query: 372 IEYLKSLQLQVQMMSMGCGVV 392
I Y++SLQ QV+ +SM V
Sbjct: 308 INYVQSLQRQVEFLSMKLSSV 328
>sp|Q9C670|BH076_ARATH Transcription factor bHLH76 OS=Arabidopsis thaliana GN=BHLH76 PE=2
SV=1
Length = 390
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 86/158 (54%), Gaps = 10/158 (6%)
Query: 238 RNTSGAGAAATSSGGGGGSSGARDLTMCEMTVTSSPGGSSASAEPPAQK-PAAEDRKRKG 296
R+ + + SSGG G D C T SS G SS + + ED+K+K
Sbjct: 143 RSINNVSEDSQSSGGNG-----HDDAKCGQT--SSKGFSSKKRKRIGKDCEEEEDKKQKD 195
Query: 297 RET-DDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQEL 355
++ + + E + +D+ K A+R +A H+L+ER RR++I+E+M+ LQ+L
Sbjct: 196 EQSPTSNANKTNSEKQPSDSLKDGYIHMRARRGQATNSHSLAERVRREKISERMKFLQDL 255
Query: 356 IPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSMGCGVV 392
+P C+K + KA MLDE I Y++SLQ Q++ +SM V
Sbjct: 256 VPGCDKVTGKAVMLDEIINYVQSLQCQIEFLSMKLSAV 293
>sp|Q9LV17|BH079_ARATH Transcription factor bHLH79 OS=Arabidopsis thaliana GN=BHLH79 PE=2
SV=1
Length = 281
Score = 75.5 bits (184), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 325 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 383
A+R +A + H+L+ER RR++I+EKM ALQ++IP CNK KA +LDE I Y++SLQ QV+
Sbjct: 155 ARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVE 214
Query: 384 MMSMGCGVV 392
+SM VV
Sbjct: 215 FLSMKLEVV 223
>sp|Q9FJL4|BH078_ARATH Transcription factor bHLH78 OS=Arabidopsis thaliana GN=BHLH78 PE=2
SV=1
Length = 498
Score = 75.1 bits (183), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 325 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 383
A+R +A + H+L+ER RR++I E+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 303 ARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 362
Query: 384 MMSMGCGVV 392
+SM V
Sbjct: 363 FLSMKLSSV 371
>sp|Q93VJ4|BEE2_ARATH Transcription factor BEE 2 OS=Arabidopsis thaliana GN=BEE2 PE=2
SV=1
Length = 304
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 325 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 383
A+R A + H+L+ER RR++I++KM+ LQ+++P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 143 ARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVE 202
Query: 384 MMSMGCGVV 392
+SM V+
Sbjct: 203 FLSMKLSVI 211
>sp|Q8GY61|BH063_ARATH Transcription factor bHLH63 OS=Arabidopsis thaliana GN=BHLH63 PE=2
SV=1
Length = 335
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 325 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 383
A+R +A + H+++ER RR++I+E+M+ LQ+L+P C+K + KA MLDE I Y++SLQ Q++
Sbjct: 174 ARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIE 233
Query: 384 MMSMGCGVV 392
+SM +V
Sbjct: 234 FLSMKLAIV 242
>sp|Q0JXE7|BPE_ARATH Transcription factor BPE OS=Arabidopsis thaliana GN=BPE PE=2 SV=1
Length = 343
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 77/128 (60%), Gaps = 8/128 (6%)
Query: 289 AEDRKRKGRET-DDEYHSEDVELESADAKKQSRGS-----TSAKRSRAAEVHNLSERRRR 342
E++++K E D + +E + E+ K+Q + A+R +A + H+L+ER RR
Sbjct: 96 GENKRQKIDEVCDGKAEAESLGTETEQKKQQMEPTKDYIHVRARRGQATDSHSLAERARR 155
Query: 343 DRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQMMSMGCGVV-PMMFPGVQ 400
++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ QV+ +SM V M PG++
Sbjct: 156 EKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNPGIE 215
Query: 401 QYMPNMGM 408
+ P M
Sbjct: 216 VFPPKEVM 223
>sp|Q9LK48|BH077_ARATH Transcription factor bHLH77 OS=Arabidopsis thaliana GN=BHLH77 PE=2
SV=1
Length = 371
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 325 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 383
A+R +A + H+L+ER RR++I+E+M LQ+L+P CN+ + KA MLDE I Y++SLQ QV+
Sbjct: 193 ARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVE 252
Query: 384 MMSMGCGVV 392
+SM V
Sbjct: 253 FLSMKLATV 261
>sp|Q9ZPW3|BH064_ARATH Transcription factor bHLH64 OS=Arabidopsis thaliana GN=BHLH64 PE=2
SV=3
Length = 337
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 325 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 383
A+R +A + H+L+ER RR++I++KM+ LQ+++P CNK + KA MLDE I Y++ LQ QV+
Sbjct: 187 ARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVE 246
Query: 384 MMSMGCGVV 392
+SM V+
Sbjct: 247 FLSMKLAVL 255
>sp|Q7XHI9|BH084_ARATH Transcription factor bHLH84 OS=Arabidopsis thaliana GN=BHLH84 PE=2
SV=1
Length = 328
Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 57/92 (61%), Gaps = 4/92 (4%)
Query: 299 TDDEYHSEDVELESADAKKQS----RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQE 354
+DDE + D L D + G T A R A + +L R+RR+RINE++R LQ
Sbjct: 209 SDDESNGGDTFLSKEDGEDSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQH 268
Query: 355 LIPRCNKSDKASMLDEAIEYLKSLQLQVQMMS 386
L+P K D ++ML+EA++Y+K LQLQ++++S
Sbjct: 269 LVPNGTKVDISTMLEEAVQYVKFLQLQIKLLS 300
>sp|Q84WK0|BH085_ARATH Transcription factor bHLH85 OS=Arabidopsis thaliana GN=BHLH85 PE=2
SV=1
Length = 352
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 47/66 (71%)
Query: 321 GSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQL 380
G T A R A + +L R+RR+RINE++R LQ L+P K D ++ML+EA+ Y+K LQL
Sbjct: 264 GKTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQL 323
Query: 381 QVQMMS 386
Q++++S
Sbjct: 324 QIKLLS 329
>sp|Q8GZ13|BEE1_ARATH Transcription factor BEE 1 OS=Arabidopsis thaliana GN=BEE1 PE=2
SV=1
Length = 260
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 325 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 383
A+R +A + H+L+ER RR +INE++R LQ+++P C K+ A+MLDE I Y++SLQ QV+
Sbjct: 147 ARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQVE 206
Query: 384 MMSM 387
+SM
Sbjct: 207 FLSM 210
>sp|A4D998|BH075_ARATH Transcription factor bHLH75 OS=Arabidopsis thaliana GN=BHLH75 PE=2
SV=1
Length = 223
Score = 68.6 bits (166), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 325 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 383
AKR +A + H+L+ER RR++INE+++ LQ+L+P C K+ A MLD I+Y++SLQ Q++
Sbjct: 106 AKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQIE 165
Query: 384 MMSM 387
+SM
Sbjct: 166 FLSM 169
>sp|Q8VZ02|BH048_ARATH Transcription factor bHLH48 OS=Arabidopsis thaliana GN=BHLH48 PE=2
SV=1
Length = 327
Score = 68.6 bits (166), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 325 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 383
A+R +A + H+L+ER RR++IN +M+ LQEL+P C+K A +LDE I ++++LQ QV+
Sbjct: 187 ARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTLQRQVE 246
Query: 384 MMSMGCGVV 392
M+SM V
Sbjct: 247 MLSMRLAAV 255
>sp|Q8GWK7|BEE3_ARATH Transcription factor BEE 3 OS=Arabidopsis thaliana GN=BEE3 PE=2
SV=1
Length = 261
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 325 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 383
A+R +A + H+++ER RR +INE+++ LQ+++P C K+ A+MLDE I Y++SLQ QV+
Sbjct: 149 ARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVE 208
Query: 384 MMSM 387
+SM
Sbjct: 209 FLSM 212
>sp|Q8LEG1|BH054_ARATH Transcription factor bHLH54 OS=Arabidopsis thaliana GN=BHLH54 PE=2
SV=1
Length = 258
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 54/79 (68%), Gaps = 4/79 (5%)
Query: 312 SADAKKQS----RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASM 367
S+D +K S +G T A + A + +L R+RR++INE+++ LQ L+P K D ++M
Sbjct: 152 SSDDEKASVTSVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTM 211
Query: 368 LDEAIEYLKSLQLQVQMMS 386
L+EA+ Y+K LQLQ++++S
Sbjct: 212 LEEAVHYVKFLQLQIKLLS 230
>sp|Q5XVH0|BH109_ARATH Transcription factor bHLH109 OS=Arabidopsis thaliana GN=BHLH109
PE=2 SV=1
Length = 185
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 311 ESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIP-RCNKSDKASMLD 369
E D + AKR R+ E + E++RR I +K+ LQ L+P C K D AS L+
Sbjct: 49 EKHDEEPDEESYRMAKRQRSMEYRMMMEKKRRKEIKDKVDILQGLMPNHCTKPDLASKLE 108
Query: 370 EAIEYLKSLQLQVQMMSMGCGVVPMMFP 397
IEY+KSL+ QV +MSM P+ P
Sbjct: 109 NIIEYIKSLKYQVDVMSMAYTTTPVYTP 136
>sp|Q3E7L7|BH139_ARATH Transcription factor bHLH139 OS=Arabidopsis thaliana GN=BHLH139
PE=4 SV=1
Length = 223
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 65/116 (56%), Gaps = 14/116 (12%)
Query: 303 YHSEDVE----LESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPR 358
Y+S D E L S +K R + A R A++ +L R+RR+RIN++++ LQ L+P
Sbjct: 109 YNSSDDEKALGLVSNTSKSLKRKA-KANRGIASDPQSLYARKRRERINDRLKTLQSLVPN 167
Query: 359 CNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGVVPMMFPGVQQYMPNMGMGIGMGM 414
K D ++ML++A+ Y+K LQLQ++++S + Y P G+ MG+
Sbjct: 168 GTKVDISTMLEDAVHYVKFLQLQIKLLSS---------EDLWMYAPLAHNGLNMGL 214
>sp|Q93Y00|BH007_ARATH Transcription factor bHLH7 OS=Arabidopsis thaliana GN=BHLH7 PE=2
SV=1
Length = 302
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 58/77 (75%), Gaps = 4/77 (5%)
Query: 320 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 379
R A+R +A + H+++ER RR+RI E++R+LQEL+P NK+D+A+M+DE ++Y+K L+
Sbjct: 141 RPRVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKTDRAAMIDEIVDYVKFLR 200
Query: 380 LQVQMMSM----GCGVV 392
LQV+++SM G G V
Sbjct: 201 LQVKVLSMSRLGGAGAV 217
>sp|O22768|UNE12_ARATH Transcription factor UNE12 OS=Arabidopsis thaliana GN=UNE12 PE=2
SV=2
Length = 310
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 58/77 (75%), Gaps = 4/77 (5%)
Query: 320 RGSTSAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 379
R A+R +A + H+++ER RR+RI E++RALQEL+P NK+D+A+M+DE ++Y+K L+
Sbjct: 143 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVKFLR 202
Query: 380 LQVQMMSM----GCGVV 392
LQV+++SM G G V
Sbjct: 203 LQVKVLSMSRLGGAGAV 219
>sp|Q9CAD0|EGL1_ARATH Transcription factor EGL1 OS=Arabidopsis thaliana GN=BHLH2 PE=1
SV=1
Length = 596
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 39/52 (75%)
Query: 334 HNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 385
H LSE++RR+++NE+ L+ +IP +K DK S+LD+ IEYL+ LQ +VQ +
Sbjct: 406 HALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQEL 457
>sp|Q9FJ00|BH086_ARATH Putative transcription factor bHLH086 OS=Arabidopsis thaliana
GN=BHLH86 PE=4 SV=2
Length = 307
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 51/76 (67%), Gaps = 4/76 (5%)
Query: 315 AKKQSRGSTSAKRSRAA----EVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDE 370
+KK S G+ + +A + +L+ + RR+RI+E+++ LQEL+P K D +ML++
Sbjct: 189 SKKPSSGTNGKIKPKATTSPKDPQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEK 248
Query: 371 AIEYLKSLQLQVQMMS 386
AI Y+K LQ+QV++++
Sbjct: 249 AIGYVKFLQVQVKVLA 264
>sp|Q9M0R0|BH081_ARATH Transcription factor bHLH81 OS=Arabidopsis thaliana GN=BHLH81 PE=2
SV=1
Length = 262
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 49/73 (67%), Gaps = 4/73 (5%)
Query: 325 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 383
AKR A +++ER RR RI++++R LQEL+P +K ++ A ML+EA+EY+K LQ Q+Q
Sbjct: 186 AKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQIQ 245
Query: 384 MMS---MGCGVVP 393
++ C +P
Sbjct: 246 ELTEEQKRCTCIP 258
>sp|Q9C707|BH083_ARATH Transcription factor bHLH83 OS=Arabidopsis thaliana GN=BHLH83 PE=2
SV=1
Length = 298
Score = 58.9 bits (141), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 21/133 (15%)
Query: 258 GARDLTMCEMTVTSSPGGSSASAEPPAQKPAAEDRKRKGRETDDEYHSEDVELESADAKK 317
G +D + TV ++ G + S P K A R G T +KK
Sbjct: 143 GQKDWLYSDSTVVTT-GSRNESLSP---KSAGNKRSHTGEST-------------QPSKK 185
Query: 318 QSRGSTSAKRSRAA----EVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIE 373
S G T + + + +L+ + RR+RI+E+++ LQEL+P K D +ML++AI
Sbjct: 186 LSSGVTGKTKPKPTTSPKDPQSLAAKNRRERISERLKILQELVPNGTKVDLVTMLEKAIS 245
Query: 374 YLKSLQLQVQMMS 386
Y+K LQ+QV++++
Sbjct: 246 YVKFLQVQVKVLA 258
>sp|Q9C8P8|BH080_ARATH Transcription factor bHLH80 OS=Arabidopsis thaliana GN=BHLH80 PE=1
SV=1
Length = 259
Score = 58.9 bits (141), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 325 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 383
AKR A +++ER RR RI++++R LQEL+P +K ++ A ML+EA+EY+K+LQ Q+Q
Sbjct: 183 AKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQIQ 242
Query: 384 MMS 386
++
Sbjct: 243 ELT 245
>sp|Q9FN69|GL3_ARATH Transcription factor GLABRA 3 OS=Arabidopsis thaliana GN=GL3 PE=1
SV=1
Length = 637
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 39/52 (75%)
Query: 334 HNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 385
H + E++RR+++NE+ L+++IP NK DK S+LD+ IEYL+ L+ +VQ +
Sbjct: 442 HAVLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQEL 493
>sp|Q66GR3|BH130_ARATH Transcription factor bHLH130 OS=Arabidopsis thaliana GN=BHLH130
PE=1 SV=1
Length = 359
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 325 AKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 383
AKR A +++ER RR RI+E+MR LQEL+P +K ++ + MLD A++Y+K LQ Q +
Sbjct: 281 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQYK 340
Query: 384 MMS 386
+++
Sbjct: 341 ILN 343
>sp|Q8S3D2|BH087_ARATH Transcription factor bHLH87 OS=Arabidopsis thaliana GN=BHLH87 PE=2
SV=1
Length = 373
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%)
Query: 336 LSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 385
++ R+RR+RI+EK+R LQ L+P K D ASMLDEA YLK L+ QV+ +
Sbjct: 282 VAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKAL 331
>sp|Q8QGQ7|BMAL2_CHICK Aryl hydrocarbon receptor nuclear translocator-like protein 2
OS=Gallus gallus GN=ARNTL2 PE=1 SV=1
Length = 622
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 57/92 (61%), Gaps = 8/92 (8%)
Query: 292 RKRKGRETDDEYHSEDVELESADAKKQSRGSTSAKRSRAAEVHNLSERRRRDRINEKMRA 351
RKRKG ++D++ + VE++ D +K++ K E H+ +E+RRRD++N +
Sbjct: 59 RKRKGSDSDNQ---DTVEVD-GDPQKRNEDEEHLKIKDFREAHSQTEKRRRDKMNNLIEE 114
Query: 352 LQELIPRCN----KSDKASMLDEAIEYLKSLQ 379
L +IP+CN K DK ++L A+++LKSL+
Sbjct: 115 LSAMIPQCNPMARKLDKLTVLRMAVQHLKSLK 146
>sp|P13027|ARRS_MAIZE Anthocyanin regulatory R-S protein OS=Zea mays GN=R-S PE=2 SV=1
Length = 612
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 42/62 (67%)
Query: 324 SAKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQ 383
+A+ A + H +SER+RR+++NE L+ L+P ++ +KAS+L E I YLK LQ +VQ
Sbjct: 409 AAQEMSATKNHVMSERKRREKLNEMFLVLKSLLPSIHRVNKASILAETIAYLKELQRRVQ 468
Query: 384 MM 385
+
Sbjct: 469 EL 470
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.126 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 160,176,242
Number of Sequences: 539616
Number of extensions: 6826478
Number of successful extensions: 55841
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 368
Number of HSP's successfully gapped in prelim test: 1300
Number of HSP's that attempted gapping in prelim test: 47743
Number of HSP's gapped (non-prelim): 6923
length of query: 423
length of database: 191,569,459
effective HSP length: 120
effective length of query: 303
effective length of database: 126,815,539
effective search space: 38425108317
effective search space used: 38425108317
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)