BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014486
(423 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225430261|ref|XP_002285072.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like [Vitis
vinifera]
Length = 428
Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/407 (95%), Positives = 395/407 (97%), Gaps = 1/407 (0%)
Query: 1 MGETRDNE-YEDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLR 59
MGETRDN+ YE+ELLDYEEE+ +APDSV K NGEAAKKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1 MGETRDNDAYEEELLDYEEEEDKAPDSVTGKVNGEAAKKGYVGIHSSGFRDFLLKPELLR 60
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ EP GQV ALV
Sbjct: 61 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVTGQVAALV 120
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA 179
LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP IVVGTPGRILA
Sbjct: 121 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 180
Query: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
LARDKDL+LKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LARDKDLALKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240
Query: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 299
CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS
Sbjct: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 300
Query: 300 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNI 359
RAAELNKLLVECNFPSICIHSGM QEERLTRYKGFKEG+KRILVATDLVGRGIDIERVNI
Sbjct: 301 RAAELNKLLVECNFPSICIHSGMPQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 360
Query: 360 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSD+LNQV +
Sbjct: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQE 407
>gi|224092470|ref|XP_002309623.1| predicted protein [Populus trichocarpa]
gi|222855599|gb|EEE93146.1| predicted protein [Populus trichocarpa]
Length = 428
Score = 766 bits (1977), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/407 (94%), Positives = 392/407 (96%), Gaps = 1/407 (0%)
Query: 1 MGETRDNE-YEDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLR 59
MGETRDN+ YE+ELLDYEEED +APDSV K NGEA KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1 MGETRDNDTYEEELLDYEEEDEKAPDSVGAKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 60
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
+IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ EP GQV ALV
Sbjct: 61 SIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPTSGQVIALV 120
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA 179
LCHTRELAYQICHEFERFSTYLPD KVAVFYGGVNIK HKDLLKNECP IVVGTPGRILA
Sbjct: 121 LCHTRELAYQICHEFERFSTYLPDTKVAVFYGGVNIKTHKDLLKNECPHIVVGTPGRILA 180
Query: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240
Query: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 299
CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL+ELEKNRKLNDLLDALDFNQVVIFVKSVS
Sbjct: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLTELEKNRKLNDLLDALDFNQVVIFVKSVS 300
Query: 300 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNI 359
RAAELNKLLVECNFPSICIHSGMSQEERL RYKGFKEG+KRILVATDLVGRGIDIERVNI
Sbjct: 301 RAAELNKLLVECNFPSICIHSGMSQEERLMRYKGFKEGHKRILVATDLVGRGIDIERVNI 360
Query: 360 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSD+LNQV +
Sbjct: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQE 407
>gi|449528365|ref|XP_004171175.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like [Cucumis
sativus]
Length = 427
Score = 766 bits (1977), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/406 (93%), Positives = 395/406 (97%)
Query: 1 MGETRDNEYEDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRA 60
MGETRDNEYE+ELLDYEEE+ +APDSV K NGEA KKGYVGIHSSGFRDFLLKPELLRA
Sbjct: 1 MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60
Query: 61 IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVL 120
IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ +P GQV+ALVL
Sbjct: 61 IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120
Query: 121 CHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILAL 180
CHTRELAYQICHEFERFSTYLPD+KVAVFYGGVNIKIHKDLLKNECP IVVGTPGRILAL
Sbjct: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180
Query: 181 ARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
+RDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC
Sbjct: 181 SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
Query: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSR 300
KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSE+EKNRKLNDLLDALDFNQVVIFVKSV+R
Sbjct: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVNR 300
Query: 301 AAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIV 360
AAEL+KLLVECNFPSICIHSGMSQEERLTRYKGFKEG+KRILVATDLVGRGIDIERVNIV
Sbjct: 301 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 360
Query: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSA+DSD+LN V +
Sbjct: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQE 406
>gi|224143128|ref|XP_002324856.1| predicted protein [Populus trichocarpa]
gi|222866290|gb|EEF03421.1| predicted protein [Populus trichocarpa]
Length = 428
Score = 763 bits (1969), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/407 (93%), Positives = 392/407 (96%), Gaps = 1/407 (0%)
Query: 1 MGETRDNE-YEDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLR 59
MGETRDN+ YE+ELLDYEEED +APDSV K NGEA KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1 MGETRDNDAYEEELLDYEEEDDKAPDSVGAKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 60
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
+IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ EP GQV ALV
Sbjct: 61 SIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPTSGQVIALV 120
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA 179
LCHTRELAYQICHEFERFSTYLPD KVAVFYGGVN+K HKDLLKNECP +VVGTPGRILA
Sbjct: 121 LCHTRELAYQICHEFERFSTYLPDTKVAVFYGGVNVKTHKDLLKNECPHVVVGTPGRILA 180
Query: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFK+TPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQVMMFSATLSKEIRPV 240
Query: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 299
CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL+ELEKNRKLNDLLDALDFNQVVIFVKSVS
Sbjct: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLTELEKNRKLNDLLDALDFNQVVIFVKSVS 300
Query: 300 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNI 359
RAAELNKLLVECNFPSICIHSGMSQEERL RYKGFKEG+KRILVATDLVGRGIDIERVNI
Sbjct: 301 RAAELNKLLVECNFPSICIHSGMSQEERLMRYKGFKEGHKRILVATDLVGRGIDIERVNI 360
Query: 360 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSD+LNQV +
Sbjct: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQE 407
>gi|317106728|dbj|BAJ53224.1| JHL06P13.3 [Jatropha curcas]
Length = 455
Score = 761 bits (1965), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/405 (93%), Positives = 393/405 (97%), Gaps = 1/405 (0%)
Query: 1 MGETRDNE-YEDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLR 59
MGE +DN+ YE+ELLDYEEED +APDSV+ KA E+AKKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1 MGEVKDNDAYEEELLDYEEEDEKAPDSVSAKAGAESAKKGYVGIHSSGFRDFLLKPELLR 60
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ EP GQV ALV
Sbjct: 61 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVAGQVAALV 120
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA 179
LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIK+HKD+LKNECP IVVGTPGRILA
Sbjct: 121 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKDILKNECPHIVVGTPGRILA 180
Query: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
LARDKDL LKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LARDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240
Query: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 299
CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL+E+EKNRKLNDLLDALDFNQVVIFVKSV+
Sbjct: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLTEMEKNRKLNDLLDALDFNQVVIFVKSVN 300
Query: 300 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNI 359
RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEG+KRILVATDLVGRGIDIERVNI
Sbjct: 301 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 360
Query: 360 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
V+NYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSD+LNQV
Sbjct: 361 VVNYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQV 405
>gi|118482305|gb|ABK93079.1| unknown [Populus trichocarpa]
Length = 428
Score = 761 bits (1965), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/407 (93%), Positives = 391/407 (96%), Gaps = 1/407 (0%)
Query: 1 MGETRDNE-YEDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLR 59
MGETRDN+ YE+ELLDYEEED +APDSV K NGEA KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1 MGETRDNDTYEEELLDYEEEDEKAPDSVGAKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 60
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
+IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ EP GQV ALV
Sbjct: 61 SIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPTSGQVIALV 120
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA 179
LCHTRELAYQICHEFERFSTYLPD KVAVFYGGVNIK HKDLLKNECP IVVGTPGRILA
Sbjct: 121 LCHTRELAYQICHEFERFSTYLPDTKVAVFYGGVNIKTHKDLLKNECPHIVVGTPGRILA 180
Query: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240
Query: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 299
CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL+ELEKNRKLNDLL ALDFNQVVIFVKSVS
Sbjct: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLTELEKNRKLNDLLGALDFNQVVIFVKSVS 300
Query: 300 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNI 359
RAAELNKLLVECNFPSICIHSGMSQEERL RYKGFKEG+KRILVATDLVGRGIDIERV+I
Sbjct: 301 RAAELNKLLVECNFPSICIHSGMSQEERLMRYKGFKEGHKRILVATDLVGRGIDIERVDI 360
Query: 360 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSD+LNQV +
Sbjct: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQE 407
>gi|225442993|ref|XP_002268833.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56 [Vitis vinifera]
gi|297743441|emb|CBI36308.3| unnamed protein product [Vitis vinifera]
Length = 428
Score = 759 bits (1959), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/407 (93%), Positives = 393/407 (96%), Gaps = 1/407 (0%)
Query: 1 MGETRDNE-YEDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLR 59
MGE RDN+ YE+ELLDYEEED +APDSVA+KA GE+AKKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1 MGEARDNDAYEEELLDYEEEDEKAPDSVASKAAGESAKKGYVGIHSSGFRDFLLKPELLR 60
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
+IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ EP GQV ALV
Sbjct: 61 SIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVAGQVAALV 120
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA 179
LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGV+IK HKDLLKNECP IVVGTPGRILA
Sbjct: 121 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVSIKTHKDLLKNECPHIVVGTPGRILA 180
Query: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
LARDKDL LK+VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LARDKDLGLKHVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240
Query: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 299
CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS
Sbjct: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 300
Query: 300 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNI 359
RAAELNKLL+ECNFPSICIHSGM QEERLTRYK FKEG+KRILVATDLVGRGIDIERVNI
Sbjct: 301 RAAELNKLLMECNFPSICIHSGMPQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNI 360
Query: 360 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSD+LNQV +
Sbjct: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQE 407
>gi|297807157|ref|XP_002871462.1| hypothetical protein ARALYDRAFT_487950 [Arabidopsis lyrata subsp.
lyrata]
gi|297317299|gb|EFH47721.1| hypothetical protein ARALYDRAFT_487950 [Arabidopsis lyrata subsp.
lyrata]
Length = 427
Score = 753 bits (1945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/407 (92%), Positives = 392/407 (96%), Gaps = 2/407 (0%)
Query: 1 MGETRDNE-YEDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLR 59
MG+ RDNE YE+ELLDYEEED + PDS K NGEA KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1 MGDARDNEAYEEELLDYEEEDEKVPDS-GNKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 59
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ EP+PGQV+ALV
Sbjct: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALV 119
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA 179
LCHTRELAYQIC+EF RFSTYLPD KV+VFYGGVNIKIHKDLLKNECP IVVGTPGR+LA
Sbjct: 120 LCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLA 179
Query: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
Query: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 299
CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSE+EKNRKLNDLLDALDFNQVVIFVKSVS
Sbjct: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 299
Query: 300 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNI 359
RAAELNKLLVECNFPSICIHSGMSQEERLTRYK FKEG+KRILVATDLVGRGIDIERVNI
Sbjct: 300 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNI 359
Query: 360 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
VINYDMPDSADTYLHRVGRAGRFGTKGLAITFV+SASDS++LNQV +
Sbjct: 360 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQE 406
>gi|297811229|ref|XP_002873498.1| hypothetical protein ARALYDRAFT_909079 [Arabidopsis lyrata subsp.
lyrata]
gi|297319335|gb|EFH49757.1| hypothetical protein ARALYDRAFT_909079 [Arabidopsis lyrata subsp.
lyrata]
Length = 427
Score = 752 bits (1941), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/407 (92%), Positives = 392/407 (96%), Gaps = 2/407 (0%)
Query: 1 MGETRDNE-YEDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLR 59
MG+ RDNE YE+ELLDYEEED + PDS +K NGEA KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1 MGDARDNEAYEEELLDYEEEDEKVPDS-GSKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 59
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ EP+PGQV+ALV
Sbjct: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALV 119
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA 179
LCHTRELAYQIC+EF RFSTYLPD KV+VFYGGVNIKIHKDLLKNECP IVVGTPGR+LA
Sbjct: 120 LCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLA 179
Query: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
Query: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 299
CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL+E+EKNRKLNDLLDALDFNQVVIFVKSVS
Sbjct: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLNEMEKNRKLNDLLDALDFNQVVIFVKSVS 299
Query: 300 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNI 359
RAAELNKLLVECNFPSICIHSGMSQEERLTRYK FKEG+KRILVATDLVGRGIDIERVNI
Sbjct: 300 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNI 359
Query: 360 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
VINYDMPDSADTYLHRVGRAGRFGTKGLAITFV+SASDS +LNQV +
Sbjct: 360 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSTVLNQVQE 406
>gi|18416493|ref|NP_568245.1| DEAD-box ATP-dependent RNA helicase 56 [Arabidopsis thaliana]
gi|186522075|ref|NP_568244.2| DEAD-box ATP-dependent RNA helicase 56 [Arabidopsis thaliana]
gi|108861899|sp|Q9LFN6.2|RH56_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 56
gi|322510107|sp|Q56XG6.3|RH15_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 15
gi|14190381|gb|AAK55671.1|AF378868_1 AT5g11200/F2I11_90 [Arabidopsis thaliana]
gi|15450405|gb|AAK96496.1| AT5g11170/F2I11_60 [Arabidopsis thaliana]
gi|16323360|gb|AAL15393.1| AT5g11200/F2I11_90 [Arabidopsis thaliana]
gi|24111365|gb|AAN46806.1| At5g11170/F2I11_60 [Arabidopsis thaliana]
gi|110740954|dbj|BAE98572.1| DEAD BOX RNA helicase RH15 - like protein [Arabidopsis thaliana]
gi|332004259|gb|AED91642.1| DEAD-box ATP-dependent RNA helicase 56 [Arabidopsis thaliana]
gi|332004262|gb|AED91645.1| DEAD-box ATP-dependent RNA helicase 56 [Arabidopsis thaliana]
Length = 427
Score = 751 bits (1940), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/407 (92%), Positives = 392/407 (96%), Gaps = 2/407 (0%)
Query: 1 MGETRDNE-YEDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLR 59
MG+ RDNE YE+ELLDYEEED + PDS K NGEA KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1 MGDARDNEAYEEELLDYEEEDEKVPDS-GNKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 59
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ EP+PGQV+ALV
Sbjct: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALV 119
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA 179
LCHTRELAYQIC+EF RFSTYLPD KV+VFYGGVNIKIHKDLLKNECP IVVGTPGR+LA
Sbjct: 120 LCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLA 179
Query: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
LAR+KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 180 LAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
Query: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 299
CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSE+EKNRKLNDLLDALDFNQVVIFVKSVS
Sbjct: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 299
Query: 300 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNI 359
RAAELNKLLVECNFPSICIHSGMSQEERLTRYK FKEG+KRILVATDLVGRGIDIERVNI
Sbjct: 300 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNI 359
Query: 360 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
VINYDMPDSADTYLHRVGRAGRFGTKGLAITFV+SASDS++LNQV +
Sbjct: 360 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQE 406
>gi|8953382|emb|CAB96655.1| DEAD BOX RNA helicase RH15 [Arabidopsis thaliana]
Length = 427
Score = 751 bits (1939), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/407 (92%), Positives = 392/407 (96%), Gaps = 2/407 (0%)
Query: 1 MGETRDNE-YEDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLR 59
MG+ RDNE YE+ELLDYEEED + PDS K NGEA KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1 MGDARDNEAYEEELLDYEEEDEKVPDS-GNKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 59
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ EP+PGQV+ALV
Sbjct: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALV 119
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA 179
LCHTRELAYQIC+EF RFSTYLPD KV+VFYGGVNIKIHKDLLKNECP IVVGTPGR+LA
Sbjct: 120 LCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLA 179
Query: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
LAR+KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 180 LAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
Query: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 299
CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSE+EKNRKLNDLLDALDFNQVVIFVKSVS
Sbjct: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 299
Query: 300 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNI 359
RAAELNKLLVECNFPSICIHSGMSQEERLTRYK FKEG+KRILVATDLVGRGIDIERVNI
Sbjct: 300 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNI 359
Query: 360 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
VINYDMPDSADTYLHRVGRAGRFGTKGLAITFV+SASDS++LNQV +
Sbjct: 360 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQE 406
>gi|8953379|emb|CAB96652.1| DEAD BOX RNA helicase RH15-like protein [Arabidopsis thaliana]
Length = 435
Score = 749 bits (1935), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/407 (92%), Positives = 391/407 (96%), Gaps = 2/407 (0%)
Query: 1 MGETRDNE-YEDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLR 59
MG+ RDNE YE+ELLDYEEED + PDS K NGEA KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1 MGDARDNEAYEEELLDYEEEDEKVPDS-GNKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 59
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ EP+PGQV+ALV
Sbjct: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALV 119
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA 179
LCHTRELAYQIC+EF RFSTYLPD KV+VFYGGVNIKIHKDLLKNECP IVVGTPGR+LA
Sbjct: 120 LCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLA 179
Query: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
LAR+KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 180 LAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
Query: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 299
CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSE+EK RKLNDLLDALDFNQVVIFVKSVS
Sbjct: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKTRKLNDLLDALDFNQVVIFVKSVS 299
Query: 300 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNI 359
RAAELNKLLVECNFPSICIHSGMSQEERLTRYK FKEG+KRILVATDLVGRGIDIERVNI
Sbjct: 300 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNI 359
Query: 360 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
VINYDMPDSADTYLHRVGRAGRFGTKGLAITFV+SASDS++LNQV +
Sbjct: 360 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQE 406
>gi|356507736|ref|XP_003522620.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like [Glycine
max]
Length = 427
Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/408 (91%), Positives = 388/408 (95%), Gaps = 1/408 (0%)
Query: 1 MGETRDNEYEDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRA 60
MGET+D YE+ELLDYEEED +APDS K NGEA KKGYVGIHSSGFRDFLLKPELLRA
Sbjct: 1 MGETKDEAYEEELLDYEEEDDKAPDSAGAKVNGEATKKGYVGIHSSGFRDFLLKPELLRA 60
Query: 61 IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVL 120
IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ +P PGQV+ALVL
Sbjct: 61 IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVPGQVSALVL 120
Query: 121 CHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILAL 180
CHTRELAYQICHEFERFSTYLPD+KVAVFYGGVNIK+HKDLLKNECP IVVGTPGRILAL
Sbjct: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKVHKDLLKNECPHIVVGTPGRILAL 180
Query: 181 ARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
RDKDLSLKNVRHFILDECDKMLESLDMR+DVQ+IFKMTPHDKQVMMFSATLSKEIRPVC
Sbjct: 181 TRDKDLSLKNVRHFILDECDKMLESLDMRKDVQDIFKMTPHDKQVMMFSATLSKEIRPVC 240
Query: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSR 300
KKFMQDPMEIYVDDEAKLTLHGLVQHYIKL E EKNRKLNDLLDALDFNQVVIFVKSVSR
Sbjct: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLKEEEKNRKLNDLLDALDFNQVVIFVKSVSR 300
Query: 301 AAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIV 360
AAEL+KLLVECNFPSICIHSGMSQEERL RYKGFKEG+ RILVATDLVGRGIDIERVNIV
Sbjct: 301 AAELDKLLVECNFPSICIHSGMSQEERLKRYKGFKEGHTRILVATDLVGRGIDIERVNIV 360
Query: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV-SKF 407
INYDMPDSADTYLHRVGRAGRFGTKGLAITFVS ++D D+LN V S+F
Sbjct: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSCSTDVDVLNNVQSRF 408
>gi|356515448|ref|XP_003526412.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like isoform 1
[Glycine max]
gi|356515450|ref|XP_003526413.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like isoform 2
[Glycine max]
Length = 427
Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/408 (91%), Positives = 388/408 (95%), Gaps = 1/408 (0%)
Query: 1 MGETRDNEYEDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRA 60
MGET+D YE+ELLDYEEED +APDS K NGEA KKGYVGIHSSGFRDFLLKPELLRA
Sbjct: 1 MGETKDEAYEEELLDYEEEDEKAPDSAGAKVNGEATKKGYVGIHSSGFRDFLLKPELLRA 60
Query: 61 IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVL 120
IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ +P PGQV+ALVL
Sbjct: 61 IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVPGQVSALVL 120
Query: 121 CHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILAL 180
CHTRELAYQICHEFERFSTYLPD+KVAVFYGGVNIK+HKDLLKNECP IVVGTPGRILAL
Sbjct: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKVHKDLLKNECPHIVVGTPGRILAL 180
Query: 181 ARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
RDKDLSLKNVRHFILDECDKMLESLDMR+DVQ+IFKMTPHDKQVMMFSATLSKEIRPVC
Sbjct: 181 TRDKDLSLKNVRHFILDECDKMLESLDMRKDVQDIFKMTPHDKQVMMFSATLSKEIRPVC 240
Query: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSR 300
KKFMQDPMEIYVDDEAKLTLHGLVQHYIKL E EKNRKLNDLLDALDFNQVVIFVKSVSR
Sbjct: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLKEEEKNRKLNDLLDALDFNQVVIFVKSVSR 300
Query: 301 AAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIV 360
AAEL+KLLVECNFPSICIHSGMSQEERL RYKGFKEG+ RILVATDLVGRGIDIERVNIV
Sbjct: 301 AAELDKLLVECNFPSICIHSGMSQEERLKRYKGFKEGHTRILVATDLVGRGIDIERVNIV 360
Query: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV-SKF 407
INYDMPDSADTYLHRVGRAGRFGTKGLAITFVS ++D D+LN V S+F
Sbjct: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSCSTDVDVLNNVQSRF 408
>gi|3776005|emb|CAA09205.1| RNA helicase [Arabidopsis thaliana]
Length = 451
Score = 744 bits (1920), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/407 (91%), Positives = 390/407 (95%), Gaps = 2/407 (0%)
Query: 1 MGETRDNE-YEDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLR 59
MG+ RDNE YE+ELLDYEEED + PDS K NGEA KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 25 MGDARDNEAYEEELLDYEEEDEKVPDS-GNKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 83
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ EP+PGQV+ALV
Sbjct: 84 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALV 143
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA 179
LCHTRELAYQIC+EF RFSTYLPD KV+VFYGGVNIKIHKDLLKNECP IVVGTPGR+LA
Sbjct: 144 LCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLA 203
Query: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
LAR+KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 204 LAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 263
Query: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 299
CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSE+EKNRKLNDLLDALDFNQVVIFVKSVS
Sbjct: 264 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 323
Query: 300 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNI 359
RA ELNKLLV C+FPSICIHSGMSQEERLTRYK FKEG+KRILVATDLVGRGIDIERVNI
Sbjct: 324 RADELNKLLVGCHFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNI 383
Query: 360 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
VINYDMPDSADTYLHRVGRAGRFGTKGLAITFV+SASDS++LNQV +
Sbjct: 384 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQE 430
>gi|357135163|ref|XP_003569181.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like
[Brachypodium distachyon]
Length = 428
Score = 743 bits (1919), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/407 (88%), Positives = 377/407 (92%), Gaps = 1/407 (0%)
Query: 1 MGETRDNE-YEDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLR 59
MGE +DNE YED+L+DYEEE D+ A + + KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1 MGEAKDNEVYEDDLVDYEEEVENVVDAAAANPSVDVVKKGYVGIHSSGFRDFLLKPELLR 60
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
AI D GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ +P GQV ALV
Sbjct: 61 AIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVAALV 120
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA 179
LCHTRELAYQICHEFERFS YL + KVAVFYGGVNIK HKDLLKNECP IVVGTPGRILA
Sbjct: 121 LCHTRELAYQICHEFERFSKYLSETKVAVFYGGVNIKNHKDLLKNECPHIVVGTPGRILA 180
Query: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
LARDKDLSLKNVRHFILDECDKML+SLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LARDKDLSLKNVRHFILDECDKMLDSLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240
Query: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 299
CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSE EKNRKLNDLLDALDFNQ+VIFVKSV
Sbjct: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEAEKNRKLNDLLDALDFNQIVIFVKSVG 300
Query: 300 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNI 359
RA+ELN+LL ECNFP+ICIHSGM+QEERLTRYK FKEG+KRILVATDLVGRGIDIERVNI
Sbjct: 301 RASELNRLLCECNFPAICIHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNI 360
Query: 360 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSD+LNQV +
Sbjct: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQE 407
>gi|357135173|ref|XP_003569186.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like
[Brachypodium distachyon]
Length = 429
Score = 742 bits (1915), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/407 (88%), Positives = 378/407 (92%), Gaps = 1/407 (0%)
Query: 1 MGETRDNE-YEDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLR 59
MGE +DNE YE++L+DYEEE A D A A+ + KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 2 MGEAKDNEVYEEDLVDYEEEVENAVDGAAANASVDVVKKGYVGIHSSGFRDFLLKPELLR 61
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
AI D GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ +P GQV ALV
Sbjct: 62 AIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVAALV 121
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA 179
LCHTRELAYQIC+EFERFS YL + KVAVFYGGV+IK HKDLLKNECP IVVGTPGRILA
Sbjct: 122 LCHTRELAYQICNEFERFSKYLSETKVAVFYGGVHIKKHKDLLKNECPHIVVGTPGRILA 181
Query: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
LARDKDLSLKNVRHFILDECDKML+SLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRP+
Sbjct: 182 LARDKDLSLKNVRHFILDECDKMLDSLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPI 241
Query: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 299
CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSE EKNRKLNDLLDALDFNQ+VIFVKSV
Sbjct: 242 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEAEKNRKLNDLLDALDFNQIVIFVKSVG 301
Query: 300 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNI 359
RA+ELNKLL ECNFP+ICIHSGM+QEERLTRYK FKEG+KRILVATDLVGRGIDIERVNI
Sbjct: 302 RASELNKLLCECNFPAICIHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNI 361
Query: 360 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSD+LNQV +
Sbjct: 362 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQE 408
>gi|357135175|ref|XP_003569187.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like
[Brachypodium distachyon]
Length = 428
Score = 741 bits (1914), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/407 (87%), Positives = 378/407 (92%), Gaps = 1/407 (0%)
Query: 1 MGETRDNE-YEDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLR 59
MGE +DNE YE++L+DYEEE A D A A+ E KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1 MGEAKDNEVYEEDLVDYEEEVENAVDGTAANASVEVVKKGYVGIHSSGFRDFLLKPELLR 60
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
AI D GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ +P GQV ALV
Sbjct: 61 AIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVAALV 120
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA 179
LCHTRELAYQIC+EFERFS YL + +VAVFYGGV+IK HKDLLKNECP IVVGTPGRILA
Sbjct: 121 LCHTRELAYQICNEFERFSKYLSETRVAVFYGGVHIKKHKDLLKNECPHIVVGTPGRILA 180
Query: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
LARDKDLSLKNVRHFILDECDKML+SLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRP+
Sbjct: 181 LARDKDLSLKNVRHFILDECDKMLDSLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPI 240
Query: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 299
CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSE EKNRKLNDLLDALDFNQ+VIFVKSV
Sbjct: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEAEKNRKLNDLLDALDFNQIVIFVKSVG 300
Query: 300 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNI 359
RA+ELN+LL ECNFP+ICIHSGM+QEERLTRYK FKEG+KRILVATDLVGRGIDIERVNI
Sbjct: 301 RASELNRLLCECNFPAICIHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNI 360
Query: 360 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSD+LNQV +
Sbjct: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQE 407
>gi|413950345|gb|AFW82994.1| hypothetical protein ZEAMMB73_566534 [Zea mays]
Length = 446
Score = 741 bits (1912), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/407 (88%), Positives = 377/407 (92%), Gaps = 2/407 (0%)
Query: 1 MGETRDNE-YEDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLR 59
MGE +DNE YE++L+DYEEE D T + + KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 20 MGEAKDNEVYEEDLVDYEEEVENVIDGAPTNGSSDVVKKGYVGIHSSGFRDFLLKPELLR 79
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
AI D GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ +P GQV ALV
Sbjct: 80 AIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVAALV 139
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA 179
LCHTRELAYQICHEFERFS YLP+++VAVFYGGV+IK HKDLLKNECP IVVGTPGRILA
Sbjct: 140 LCHTRELAYQICHEFERFSKYLPELRVAVFYGGVHIKNHKDLLKNECPHIVVGTPGRILA 199
Query: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
LARDKDL LKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 200 LARDKDLPLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 259
Query: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 299
CK+FMQDPMEIYVDDEAKLTLHGLVQHYIKLSE EKNRKLNDLLDALDFNQVVIFVKSVS
Sbjct: 260 CKRFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEAEKNRKLNDLLDALDFNQVVIFVKSVS 319
Query: 300 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNI 359
RAAELNKLL ECNFPSICIHSGM+QEERLTRYK FKEG+KRILVATDLVGRGIDIERVNI
Sbjct: 320 RAAELNKLLCECNFPSICIHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNI 379
Query: 360 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
V+NYDMPDSADTYLHRVGRAGRFGTKGLAITFVSS SDSD+LNQV +
Sbjct: 380 VVNYDMPDSADTYLHRVGRAGRFGTKGLAITFVSS-SDSDVLNQVQE 425
>gi|294461150|gb|ADE76139.1| unknown [Picea sitchensis]
Length = 427
Score = 741 bits (1912), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/406 (88%), Positives = 380/406 (93%)
Query: 1 MGETRDNEYEDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRA 60
MGE ++++ E L EE+ A +SVA + GE KKGYVGIHSSGFRDFLLKPELLRA
Sbjct: 1 MGELKESDTYQEELLDYEEEDVAQESVAARGAGETVKKGYVGIHSSGFRDFLLKPELLRA 60
Query: 61 IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVL 120
IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ EP GQV ALVL
Sbjct: 61 IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVAGQVAALVL 120
Query: 121 CHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILAL 180
CHTRELAYQICHEFERF TYL D+KVAVFYGGVNIK HK LLKNECP IVVGTPGRILAL
Sbjct: 121 CHTRELAYQICHEFERFITYLTDLKVAVFYGGVNIKTHKSLLKNECPHIVVGTPGRILAL 180
Query: 181 ARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
AR+KDL+LKNVRHFILDECD+MLESLDMR+DVQEIFKMTPHDKQVMMFSATLSKEIRPVC
Sbjct: 181 AREKDLNLKNVRHFILDECDRMLESLDMRKDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
Query: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSR 300
K+FMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSV+R
Sbjct: 241 KRFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVNR 300
Query: 301 AAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIV 360
AAELNKLLVECNFPSICIHSGM+QEERLTRYKGFKEG+KRILVATDLVGRGIDIERVNIV
Sbjct: 301 AAELNKLLVECNFPSICIHSGMTQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 360
Query: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
+NYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSD+LNQV +
Sbjct: 361 VNYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQE 406
>gi|357466255|ref|XP_003603412.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355492460|gb|AES73663.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 427
Score = 740 bits (1911), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/408 (89%), Positives = 389/408 (95%), Gaps = 1/408 (0%)
Query: 1 MGETRDNEYEDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRA 60
MGE +D YE+ELLDYEEE+ +APD+ K NGEA KKGYVGIHSSGFRDFLLKPELLRA
Sbjct: 1 MGEPKDETYEEELLDYEEEEDKAPDTNGAKVNGEATKKGYVGIHSSGFRDFLLKPELLRA 60
Query: 61 IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVL 120
IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ +P PGQV+ALVL
Sbjct: 61 IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVPGQVSALVL 120
Query: 121 CHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILAL 180
CHTRELAYQICHEFERFSTYLPD+KVAVFYGGVNIK+HKDLLKNECPQIVVGTPGRILAL
Sbjct: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKVHKDLLKNECPQIVVGTPGRILAL 180
Query: 181 ARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
AR+K+LSLKNVRHF+LDECDKMLESLDMR+DVQ+IFK+TPHDKQVMMFSATLSKEIRPVC
Sbjct: 181 AREKNLSLKNVRHFVLDECDKMLESLDMRKDVQDIFKLTPHDKQVMMFSATLSKEIRPVC 240
Query: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSR 300
KKFMQDPMEIYVDDEAKLTLHGLVQHYIKL E EKNRKLNDLLDALDFNQVVIFVKSVSR
Sbjct: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLKEEEKNRKLNDLLDALDFNQVVIFVKSVSR 300
Query: 301 AAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIV 360
AAEL++LL+ECNFPSICIHSGMSQEERL RY+GFKEG+ RILVATDLVGRGIDIERVNIV
Sbjct: 301 AAELDRLLIECNFPSICIHSGMSQEERLKRYRGFKEGHSRILVATDLVGRGIDIERVNIV 360
Query: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV-SKF 407
INYDMPDSADTYLHRVGRAGRFGTKGLAITFVS +SD D+LN V S+F
Sbjct: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSCSSDVDVLNNVQSRF 408
>gi|357436963|ref|XP_003588757.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355477805|gb|AES59008.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 427
Score = 740 bits (1910), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/387 (91%), Positives = 371/387 (95%), Gaps = 1/387 (0%)
Query: 22 QAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAI 81
+APDSV K NGE+ KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAI
Sbjct: 22 KAPDSVGAKVNGESGKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAI 81
Query: 82 LGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYL 141
LGMDV+CQAKSGMGKTAVFVLSTLQQ +P PGQV+AL+LCHTRELAYQICHEFERFSTYL
Sbjct: 82 LGMDVLCQAKSGMGKTAVFVLSTLQQIDPVPGQVSALILCHTRELAYQICHEFERFSTYL 141
Query: 142 PDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDK 201
D+KVAVFYGGVNIK+HKDLLKNECP IVVGTPGRILALARDKDLSLKNVRHFILDECDK
Sbjct: 142 ADLKVAVFYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKDLSLKNVRHFILDECDK 201
Query: 202 MLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH 261
MLESLDMR+DVQ+IFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH
Sbjct: 202 MLESLDMRKDVQDIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH 261
Query: 262 GLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSG 321
GLVQHYIKL E EKNRKLNDLLDALDFNQVVIFVKSVSRAAEL+KLLVECNFPSICIHSG
Sbjct: 262 GLVQHYIKLKEEEKNRKLNDLLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSG 321
Query: 322 MSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 381
MSQEERL RYKGFKEG+ RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR
Sbjct: 322 MSQEERLKRYKGFKEGHTRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 381
Query: 382 FGTKGLAITFVSSASDSDILNQV-SKF 407
FGTKGLAITFVS +SD D+LN V S+F
Sbjct: 382 FGTKGLAITFVSCSSDVDVLNNVQSRF 408
>gi|255553153|ref|XP_002517619.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223543251|gb|EEF44783.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 427
Score = 740 bits (1910), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/383 (92%), Positives = 370/383 (96%), Gaps = 1/383 (0%)
Query: 22 QAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAI 81
+APDSV+ KA + AKKGYVGIHSSGFRDFLLKPELLRAI+DSGFEHPSEVQHECIPQAI
Sbjct: 23 KAPDSVSAKA-ADTAKKGYVGIHSSGFRDFLLKPELLRAIIDSGFEHPSEVQHECIPQAI 81
Query: 82 LGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYL 141
LGM VICQAKSGMGKTAVFVLSTLQQ +P GQV ALVLCHTRELAYQICHEFERFSTYL
Sbjct: 82 LGMHVICQAKSGMGKTAVFVLSTLQQIDPVAGQVAALVLCHTRELAYQICHEFERFSTYL 141
Query: 142 PDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDK 201
PD+KV+VFYGGVNIKIHKDLLKNECP +VVGTPGRILALARDKDL LKNVRHFILDECDK
Sbjct: 142 PDLKVSVFYGGVNIKIHKDLLKNECPHVVVGTPGRILALARDKDLGLKNVRHFILDECDK 201
Query: 202 MLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH 261
MLESLDMRRDVQEIFKMTP+DKQVMMFSATLSKEIRPVCKKFMQ PMEIYVDDEAKLTLH
Sbjct: 202 MLESLDMRRDVQEIFKMTPYDKQVMMFSATLSKEIRPVCKKFMQAPMEIYVDDEAKLTLH 261
Query: 262 GLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSG 321
GLVQHYIKL+ELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLL+ECNFPSICIHSG
Sbjct: 262 GLVQHYIKLTELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLMECNFPSICIHSG 321
Query: 322 MSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 381
MSQEERLT+YK FKEG+KRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR
Sbjct: 322 MSQEERLTKYKNFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 381
Query: 382 FGTKGLAITFVSSASDSDILNQV 404
FGTKGLAITFVSSASDSD+LNQV
Sbjct: 382 FGTKGLAITFVSSASDSDVLNQV 404
>gi|356519355|ref|XP_003528338.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like [Glycine
max]
Length = 426
Score = 739 bits (1909), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/409 (90%), Positives = 385/409 (94%), Gaps = 4/409 (0%)
Query: 1 MGETRDNE-YEDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLR 59
MGE +D E YE+EL+DYEEE+ +APDS K E+ KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1 MGELKDTEAYEEELIDYEEEEEKAPDS--AKPVAESGKKGYVGIHSSGFRDFLLKPELLR 58
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ +P PGQV ALV
Sbjct: 59 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQVDPVPGQVAALV 118
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA 179
LCHTRELAYQICHEFERFSTYLPDIK AVFYGGVNIK+HK+LLKNECP IVVGTPGRILA
Sbjct: 119 LCHTRELAYQICHEFERFSTYLPDIKAAVFYGGVNIKVHKELLKNECPHIVVGTPGRILA 178
Query: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
LARDKDL LKNVRHFILDECDKMLESLDMRRDVQEIFK+TPHDKQVMMFSATLSKEIRPV
Sbjct: 179 LARDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQVMMFSATLSKEIRPV 238
Query: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 299
CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL E EKNRKLNDLLDALDFNQVVIFVKSVS
Sbjct: 239 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQETEKNRKLNDLLDALDFNQVVIFVKSVS 298
Query: 300 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNI 359
RAAELNKLLVECNFPSICIHS MSQEERL RYKGFKEG +RILVATDLVGRGIDIERVNI
Sbjct: 299 RAAELNKLLVECNFPSICIHSAMSQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNI 358
Query: 360 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV-SKF 407
VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSS +DS++LNQV S+F
Sbjct: 359 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSTADSEVLNQVQSRF 407
>gi|356526203|ref|XP_003531708.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like [Glycine
max]
Length = 426
Score = 739 bits (1908), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/409 (90%), Positives = 385/409 (94%), Gaps = 4/409 (0%)
Query: 1 MGETRDNE-YEDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLR 59
MGE +D E YE+EL+DYEEE+ +APDS K E+ KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1 MGELKDTEAYEEELIDYEEEEEKAPDS--AKPVTESGKKGYVGIHSSGFRDFLLKPELLR 58
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ +P PGQV ALV
Sbjct: 59 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQVDPVPGQVAALV 118
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA 179
LCHTRELAYQICHEFERFSTYLPDIK AVFYGGVNIK+HK+LLKNECP IVVGTPGRILA
Sbjct: 119 LCHTRELAYQICHEFERFSTYLPDIKAAVFYGGVNIKVHKELLKNECPHIVVGTPGRILA 178
Query: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
LARDKDL LKNVRHFILDECDKMLESLDMRRDVQEIFK+TPHDKQVMMFSATLSKEIRPV
Sbjct: 179 LARDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQVMMFSATLSKEIRPV 238
Query: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 299
CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL E EKNRKLNDLLDALDFNQVVIFVKSVS
Sbjct: 239 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQETEKNRKLNDLLDALDFNQVVIFVKSVS 298
Query: 300 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNI 359
RAAELNKLLVECNFPSICIHS MSQEERL RYKGFKEG +RILVATDLVGRGIDIERVNI
Sbjct: 299 RAAELNKLLVECNFPSICIHSAMSQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNI 358
Query: 360 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV-SKF 407
VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSS +DS++LNQV S+F
Sbjct: 359 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSTADSEVLNQVQSRF 407
>gi|293331927|ref|NP_001170610.1| uncharacterized protein LOC100384654 [Zea mays]
gi|238006354|gb|ACR34212.1| unknown [Zea mays]
gi|413950343|gb|AFW82992.1| hypothetical protein ZEAMMB73_566534 [Zea mays]
gi|413950344|gb|AFW82993.1| hypothetical protein ZEAMMB73_566534 [Zea mays]
Length = 427
Score = 739 bits (1908), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/407 (88%), Positives = 377/407 (92%), Gaps = 2/407 (0%)
Query: 1 MGETRDNE-YEDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLR 59
MGE +DNE YE++L+DYEEE D T + + KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1 MGEAKDNEVYEEDLVDYEEEVENVIDGAPTNGSSDVVKKGYVGIHSSGFRDFLLKPELLR 60
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
AI D GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ +P GQV ALV
Sbjct: 61 AIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVAALV 120
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA 179
LCHTRELAYQICHEFERFS YLP+++VAVFYGGV+IK HKDLLKNECP IVVGTPGRILA
Sbjct: 121 LCHTRELAYQICHEFERFSKYLPELRVAVFYGGVHIKNHKDLLKNECPHIVVGTPGRILA 180
Query: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
LARDKDL LKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LARDKDLPLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240
Query: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 299
CK+FMQDPMEIYVDDEAKLTLHGLVQHYIKLSE EKNRKLNDLLDALDFNQVVIFVKSVS
Sbjct: 241 CKRFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEAEKNRKLNDLLDALDFNQVVIFVKSVS 300
Query: 300 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNI 359
RAAELNKLL ECNFPSICIHSGM+QEERLTRYK FKEG+KRILVATDLVGRGIDIERVNI
Sbjct: 301 RAAELNKLLCECNFPSICIHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNI 360
Query: 360 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
V+NYDMPDSADTYLHRVGRAGRFGTKGLAITFVSS SDSD+LNQV +
Sbjct: 361 VVNYDMPDSADTYLHRVGRAGRFGTKGLAITFVSS-SDSDVLNQVQE 406
>gi|168035593|ref|XP_001770294.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678511|gb|EDQ64969.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 425
Score = 738 bits (1904), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/377 (94%), Positives = 363/377 (96%)
Query: 30 KANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQ 89
K NGE KKGYVGIHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAILGMDVICQ
Sbjct: 28 KTNGETVKKGYVGIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVICQ 87
Query: 90 AKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVF 149
AKSGMGKTAVFVLSTLQQ EP GQV ALVLCHTRELAYQICHEFERFSTYLPDIKVAVF
Sbjct: 88 AKSGMGKTAVFVLSTLQQIEPVTGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVF 147
Query: 150 YGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMR 209
YGGVNIK HKDLLKNECP IVVGTPGRIL LARDKDLSLK+VRHFILDECDKMLESLDMR
Sbjct: 148 YGGVNIKTHKDLLKNECPHIVVGTPGRILGLARDKDLSLKSVRHFILDECDKMLESLDMR 207
Query: 210 RDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIK 269
RDVQEIFK+TPHDKQVMMFSATLSKEIRPVCK+FMQDPMEIYVDDEAKLTLHGLVQHYIK
Sbjct: 208 RDVQEIFKLTPHDKQVMMFSATLSKEIRPVCKRFMQDPMEIYVDDEAKLTLHGLVQHYIK 267
Query: 270 LSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLT 329
L E+EKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLT
Sbjct: 268 LGEVEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLT 327
Query: 330 RYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAI 389
RYKGFKEG+KRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAI
Sbjct: 328 RYKGFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAI 387
Query: 390 TFVSSASDSDILNQVSK 406
TFV+S SDSD+LNQV +
Sbjct: 388 TFVASPSDSDVLNQVQE 404
>gi|168059571|ref|XP_001781775.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666777|gb|EDQ53423.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 432
Score = 737 bits (1903), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/377 (94%), Positives = 364/377 (96%)
Query: 30 KANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQ 89
K NGE KKGYVGIHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAILGMDVICQ
Sbjct: 28 KTNGETVKKGYVGIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVICQ 87
Query: 90 AKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVF 149
AKSGMGKTAVFVLSTLQQ EP GQV ALVLCHTRELAYQICHEFERFSTYLPDIKVAVF
Sbjct: 88 AKSGMGKTAVFVLSTLQQIEPVAGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVF 147
Query: 150 YGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMR 209
YGGVNIK HKDLLKNECP IVVGTPGRIL LARDKDLSLK+VRHFILDECDKMLESLDMR
Sbjct: 148 YGGVNIKTHKDLLKNECPHIVVGTPGRILGLARDKDLSLKSVRHFILDECDKMLESLDMR 207
Query: 210 RDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIK 269
RDVQEIFK+TPHDKQVMMFSATLSKEIRPVCK+FMQDPMEIYVDDEAKLTLHGLVQHYIK
Sbjct: 208 RDVQEIFKLTPHDKQVMMFSATLSKEIRPVCKRFMQDPMEIYVDDEAKLTLHGLVQHYIK 267
Query: 270 LSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLT 329
LSE+EKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLT
Sbjct: 268 LSEVEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLT 327
Query: 330 RYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAI 389
RYKGFKEG+KRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAI
Sbjct: 328 RYKGFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAI 387
Query: 390 TFVSSASDSDILNQVSK 406
TFV+SA DS++LNQV +
Sbjct: 388 TFVASAPDSNVLNQVQE 404
>gi|409191772|gb|AFV30230.1| ATP-dependent RNA helicase [Medicago sativa]
Length = 427
Score = 737 bits (1902), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/387 (91%), Positives = 370/387 (95%), Gaps = 1/387 (0%)
Query: 22 QAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAI 81
+APDSV K NGE+ KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAI
Sbjct: 22 KAPDSVGAKVNGESGKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAI 81
Query: 82 LGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYL 141
LGMDV+CQAKSGMGKTAVFVLSTLQQ +P PGQV+AL+LCHTRELAYQICHEFERFSTYL
Sbjct: 82 LGMDVLCQAKSGMGKTAVFVLSTLQQIDPVPGQVSALILCHTRELAYQICHEFERFSTYL 141
Query: 142 PDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDK 201
D+KVAVFYGGVNIK+HKDLLKNECP IVVGTPGRILALARDKDLSLKNVRHFILDECDK
Sbjct: 142 ADLKVAVFYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKDLSLKNVRHFILDECDK 201
Query: 202 MLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH 261
MLESLDMR+DVQ+IFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH
Sbjct: 202 MLESLDMRKDVQDIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH 261
Query: 262 GLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSG 321
GLVQHYIKL E EKNRKL DLLDALDFNQVVIFVKSVSRAAEL+KLLVECNFPSICIHSG
Sbjct: 262 GLVQHYIKLKEEEKNRKLYDLLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSG 321
Query: 322 MSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 381
MSQEERL RYKGFKEG+ RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR
Sbjct: 322 MSQEERLKRYKGFKEGHTRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 381
Query: 382 FGTKGLAITFVSSASDSDILNQV-SKF 407
FGTKGLAITFVS +SD D+LN V S+F
Sbjct: 382 FGTKGLAITFVSCSSDVDVLNNVQSRF 408
>gi|388507678|gb|AFK41905.1| unknown [Medicago truncatula]
Length = 427
Score = 734 bits (1894), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/387 (91%), Positives = 369/387 (95%), Gaps = 1/387 (0%)
Query: 22 QAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAI 81
+APDSV K NGE+ KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAI
Sbjct: 22 KAPDSVGAKVNGESGKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAI 81
Query: 82 LGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYL 141
LGMDV+CQAKSGMGKTAVFVLSTLQQ +P PGQV+AL+LCHTRELAYQICHEFE FSTYL
Sbjct: 82 LGMDVLCQAKSGMGKTAVFVLSTLQQIDPVPGQVSALILCHTRELAYQICHEFEGFSTYL 141
Query: 142 PDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDK 201
D+KVAVFYGGVNIK+HKDLLKNECP IVVGTPGRILALARDKDLSLKNVRHFILDECDK
Sbjct: 142 ADLKVAVFYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKDLSLKNVRHFILDECDK 201
Query: 202 MLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH 261
MLESLDMR+DVQ+IFKMTP DKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH
Sbjct: 202 MLESLDMRKDVQDIFKMTPRDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH 261
Query: 262 GLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSG 321
GLVQHYIKL E EKNRKLNDLLDALDFNQVVIFVKSVSRAAEL+KLLVECNFPSICIHSG
Sbjct: 262 GLVQHYIKLKEEEKNRKLNDLLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSG 321
Query: 322 MSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 381
MSQEERL RYKGFKEG+ RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR
Sbjct: 322 MSQEERLKRYKGFKEGHTRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 381
Query: 382 FGTKGLAITFVSSASDSDILNQV-SKF 407
FGTKGLAITFVS +SD D+LN V S+F
Sbjct: 382 FGTKGLAITFVSCSSDVDVLNNVQSRF 408
>gi|238481240|ref|NP_001154707.1| DEAD-box ATP-dependent RNA helicase 56 [Arabidopsis thaliana]
gi|332004264|gb|AED91647.1| DEAD-box ATP-dependent RNA helicase 56 [Arabidopsis thaliana]
Length = 468
Score = 731 bits (1886), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/448 (84%), Positives = 392/448 (87%), Gaps = 43/448 (9%)
Query: 1 MGETRDNE-YEDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLR 59
MG+ RDNE YE+ELLDYEEED + PDS K NGEA KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1 MGDARDNEAYEEELLDYEEEDEKVPDS-GNKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 59
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ EP+PGQV+ALV
Sbjct: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALV 119
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA 179
LCHTRELAYQIC+EF RFSTYLPD KV+VFYGGVNIKIHKDLLKNECP IVVGTPGR+LA
Sbjct: 120 LCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLA 179
Query: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
LAR+KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 180 LAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
Query: 240 CKKFMQ-----------------------------------------DPMEIYVDDEAKL 258
CKKFMQ DPMEIYVDDEAKL
Sbjct: 240 CKKFMQDGLRTLSGDSVALWWVGFGSGYCVFPRFHRARMGLNVPSNIDPMEIYVDDEAKL 299
Query: 259 TLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICI 318
TLHGLVQHYIKLSE+EKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICI
Sbjct: 300 TLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICI 359
Query: 319 HSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGR 378
HSGMSQEERLTRYK FKEG+KRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGR
Sbjct: 360 HSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGR 419
Query: 379 AGRFGTKGLAITFVSSASDSDILNQVSK 406
AGRFGTKGLAITFV+SASDS++LNQV +
Sbjct: 420 AGRFGTKGLAITFVASASDSEVLNQVQE 447
>gi|413948693|gb|AFW81342.1| spliceosome RNA helicase BAT1 isoform 1 [Zea mays]
gi|413948694|gb|AFW81343.1| spliceosome RNA helicase BAT1 isoform 2 [Zea mays]
gi|413948695|gb|AFW81344.1| spliceosome RNA helicase BAT1 isoform 3 [Zea mays]
Length = 429
Score = 729 bits (1882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/407 (88%), Positives = 376/407 (92%), Gaps = 1/407 (0%)
Query: 1 MGETRDNEYEDELLDYEEEDA-QAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLR 59
MGE ++N+ +E L EED + D A K GE AKKGYVGIHSSGFRDFLLKPELLR
Sbjct: 2 MGEAKENDVYEEELLDYEEDDDKTVDGSAAKPTGEVAKKGYVGIHSSGFRDFLLKPELLR 61
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
AI D GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLS+LQQ +P GQV ALV
Sbjct: 62 AIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVAGQVAALV 121
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA 179
LCHTRELAYQICHEFERFS YL ++KVAVFYGGV+I+ HKDLLKNECP IVVGTPGRILA
Sbjct: 122 LCHTRELAYQICHEFERFSKYLTEVKVAVFYGGVHIRKHKDLLKNECPHIVVGTPGRILA 181
Query: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 182 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 241
Query: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 299
CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSE EKNRKLNDLLDALDFNQVVIFVKSVS
Sbjct: 242 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEAEKNRKLNDLLDALDFNQVVIFVKSVS 301
Query: 300 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNI 359
RAAELNKLL ECNFPSICIHSGM+QEERLTRYK FKEG+KRILVATDLVGRGIDIERVNI
Sbjct: 302 RAAELNKLLCECNFPSICIHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNI 361
Query: 360 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSD+LNQV +
Sbjct: 362 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQE 408
>gi|226506726|ref|NP_001141599.1| uncharacterized protein LOC100273717 [Zea mays]
gi|224032233|gb|ACN35192.1| unknown [Zea mays]
Length = 429
Score = 727 bits (1876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/407 (88%), Positives = 375/407 (92%), Gaps = 1/407 (0%)
Query: 1 MGETRDNEYEDELLDYEEEDA-QAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLR 59
MGE ++N+ +E L EED + D A K GE AKKGYVGIHSSGFRDFLLKPELLR
Sbjct: 2 MGEAKENDVYEEELLDYEEDDDKTVDGSAAKPTGEVAKKGYVGIHSSGFRDFLLKPELLR 61
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
AI D GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLS+LQQ +P GQV ALV
Sbjct: 62 AIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVAGQVAALV 121
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA 179
LCHTRELAYQICHEFERFS YL ++KVAVFYGGV+I+ HKDLLKNECP IVVGTPGRILA
Sbjct: 122 LCHTRELAYQICHEFERFSKYLTEVKVAVFYGGVHIRKHKDLLKNECPHIVVGTPGRILA 181
Query: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 182 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 241
Query: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 299
CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSE EKNRKLNDLLDALDFNQVVIFVKSVS
Sbjct: 242 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEAEKNRKLNDLLDALDFNQVVIFVKSVS 301
Query: 300 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNI 359
RAAELNKLL ECNFPSICIHSGM+QEERLT YK FKEG+KRILVATDLVGRGIDIERVNI
Sbjct: 302 RAAELNKLLCECNFPSICIHSGMTQEERLTSYKNFKEGHKRILVATDLVGRGIDIERVNI 361
Query: 360 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSD+LNQV +
Sbjct: 362 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQE 408
>gi|143456603|sp|Q0JM17.2|RH56_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 56
gi|57899406|dbj|BAD88053.1| putative HLA-B associated transcript 1 [Oryza sativa Japonica
Group]
gi|215695226|dbj|BAG90417.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258618301|gb|ACV83946.1| DExD box helicase protein HLA-B associated transcript 1 [Oryza
sativa Japonica Group]
Length = 432
Score = 726 bits (1875), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/408 (87%), Positives = 377/408 (92%), Gaps = 3/408 (0%)
Query: 2 GETRDNE-YEDELLDYEEEDAQAPDSVATKANG--EAAKKGYVGIHSSGFRDFLLKPELL 58
E +DNE YE++L+DYEEE D A AN + KKGYVGIHSSGFRDFLLKPELL
Sbjct: 4 AEVKDNEVYEEDLVDYEEEVENGTDGGANAANASADVVKKGYVGIHSSGFRDFLLKPELL 63
Query: 59 RAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTAL 118
RAI D GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLS+LQQ +P GQV AL
Sbjct: 64 RAIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVAGQVGAL 123
Query: 119 VLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRIL 178
VLCHTRELAYQICHEFERFS YLP++KVAVFYGGV+IK HKDLLKN+CP IVVGTPGRIL
Sbjct: 124 VLCHTRELAYQICHEFERFSKYLPEVKVAVFYGGVHIKKHKDLLKNDCPHIVVGTPGRIL 183
Query: 179 ALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRP 238
ALAR+KDLSLKNVRHFILDECDKML+SLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRP
Sbjct: 184 ALAREKDLSLKNVRHFILDECDKMLDSLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRP 243
Query: 239 VCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSV 298
VCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSE EKNRKLNDLLDALDFNQVVIFVKSV
Sbjct: 244 VCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEAEKNRKLNDLLDALDFNQVVIFVKSV 303
Query: 299 SRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVN 358
SRAAELNKLL ECNFP+I IHSGM+QEERLTRYK FKEG+KRILVATDLVGRGIDIERVN
Sbjct: 304 SRAAELNKLLCECNFPAISIHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVN 363
Query: 359 IVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
IVINYDMPDSAD+YLHRVGRAGRFGTKGLAITFVSSASDSD+LNQV +
Sbjct: 364 IVINYDMPDSADSYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQE 411
>gi|115437444|ref|NP_001043297.1| Os01g0549700 [Oryza sativa Japonica Group]
gi|113532828|dbj|BAF05211.1| Os01g0549700, partial [Oryza sativa Japonica Group]
Length = 495
Score = 726 bits (1874), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/408 (87%), Positives = 377/408 (92%), Gaps = 3/408 (0%)
Query: 2 GETRDNE-YEDELLDYEEEDAQAPDSVATKANG--EAAKKGYVGIHSSGFRDFLLKPELL 58
E +DNE YE++L+DYEEE D A AN + KKGYVGIHSSGFRDFLLKPELL
Sbjct: 67 AEVKDNEVYEEDLVDYEEEVENGTDGGANAANASADVVKKGYVGIHSSGFRDFLLKPELL 126
Query: 59 RAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTAL 118
RAI D GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLS+LQQ +P GQV AL
Sbjct: 127 RAIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVAGQVGAL 186
Query: 119 VLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRIL 178
VLCHTRELAYQICHEFERFS YLP++KVAVFYGGV+IK HKDLLKN+CP IVVGTPGRIL
Sbjct: 187 VLCHTRELAYQICHEFERFSKYLPEVKVAVFYGGVHIKKHKDLLKNDCPHIVVGTPGRIL 246
Query: 179 ALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRP 238
ALAR+KDLSLKNVRHFILDECDKML+SLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRP
Sbjct: 247 ALAREKDLSLKNVRHFILDECDKMLDSLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRP 306
Query: 239 VCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSV 298
VCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSE EKNRKLNDLLDALDFNQVVIFVKSV
Sbjct: 307 VCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEAEKNRKLNDLLDALDFNQVVIFVKSV 366
Query: 299 SRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVN 358
SRAAELNKLL ECNFP+I IHSGM+QEERLTRYK FKEG+KRILVATDLVGRGIDIERVN
Sbjct: 367 SRAAELNKLLCECNFPAISIHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVN 426
Query: 359 IVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
IVINYDMPDSAD+YLHRVGRAGRFGTKGLAITFVSSASDSD+LNQV +
Sbjct: 427 IVINYDMPDSADSYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQE 474
>gi|302806860|ref|XP_002985161.1| hypothetical protein SELMODRAFT_446187 [Selaginella moellendorffii]
gi|300146989|gb|EFJ13655.1| hypothetical protein SELMODRAFT_446187 [Selaginella moellendorffii]
Length = 473
Score = 723 bits (1866), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/407 (89%), Positives = 384/407 (94%), Gaps = 1/407 (0%)
Query: 1 MGETRDNE-YEDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLR 59
MGE ++N+ Y++ELLDYEEE+ APD+VA K E KKGYVGIHSSGFRDFLLKPEL+R
Sbjct: 1 MGEAKENDTYQEELLDYEEEEEAAPDAVAAKGAAETVKKGYVGIHSSGFRDFLLKPELVR 60
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
AIVD GFEHPSEVQ ECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ EP GQV ALV
Sbjct: 61 AIVDCGFEHPSEVQFECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPLKGQVAALV 120
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA 179
LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIK HKDLLKNECP IVVGTPGRIL
Sbjct: 121 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKTHKDLLKNECPHIVVGTPGRILQ 180
Query: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
L R+K+LSLK VRHFILDECDKMLESLDMRRDVQEIFK+TPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LTREKELSLKGVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQVMMFSATLSKEIRPV 240
Query: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 299
CK+FMQDPMEIYVDDEAKLTLHGLVQHYIKLSE EKNRKLNDLLDALDFNQVVIFVKSV+
Sbjct: 241 CKRFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEAEKNRKLNDLLDALDFNQVVIFVKSVN 300
Query: 300 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNI 359
RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEG+KRILVATDLVGRGIDIERVNI
Sbjct: 301 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 360
Query: 360 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
VINYDMP+SADTYLHRVGRAGRFGTKGLAITFV+S++DS++LNQV +
Sbjct: 361 VINYDMPESADTYLHRVGRAGRFGTKGLAITFVASSTDSNVLNQVQE 407
>gi|115437448|ref|NP_001043298.1| Os01g0550000 [Oryza sativa Japonica Group]
gi|75320875|sp|Q5JK84.1|RH15_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 15
gi|57899408|dbj|BAD88055.1| putative HLA-B associated transcript 1 [Oryza sativa Japonica
Group]
gi|57900053|dbj|BAD88115.1| putative HLA-B associated transcript 1 [Oryza sativa Japonica
Group]
gi|113532829|dbj|BAF05212.1| Os01g0550000 [Oryza sativa Japonica Group]
gi|215768539|dbj|BAH00768.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218188434|gb|EEC70861.1| hypothetical protein OsI_02373 [Oryza sativa Indica Group]
Length = 432
Score = 723 bits (1865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/408 (87%), Positives = 378/408 (92%), Gaps = 3/408 (0%)
Query: 2 GETRDNE-YEDELLDYEEE--DAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELL 58
E +DNE YE++L+DYEEE + + A A+ + KKGYVGIHSSGFRDFLLKPELL
Sbjct: 4 AEVKDNEVYEEDLVDYEEEVENGADGGAAAANASADVVKKGYVGIHSSGFRDFLLKPELL 63
Query: 59 RAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTAL 118
RAI D GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLS+LQQ +P GQV AL
Sbjct: 64 RAIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVAGQVGAL 123
Query: 119 VLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRIL 178
VLCHTRELAYQICHEFERFS YLP++KVAVFYGGV+IK HKDLLKN+CP IVVGTPGRIL
Sbjct: 124 VLCHTRELAYQICHEFERFSKYLPEVKVAVFYGGVHIKKHKDLLKNDCPHIVVGTPGRIL 183
Query: 179 ALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRP 238
ALAR+KDLSLKNVRHFILDECDKML+SLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRP
Sbjct: 184 ALAREKDLSLKNVRHFILDECDKMLDSLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRP 243
Query: 239 VCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSV 298
VCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSE EKNRKLNDLLDALDFNQVVIFVKSV
Sbjct: 244 VCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEAEKNRKLNDLLDALDFNQVVIFVKSV 303
Query: 299 SRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVN 358
SRAAELNKLL ECNFP+I IHSGM+QEERLTRYK FKEG+KRILVATDLVGRGIDIERVN
Sbjct: 304 SRAAELNKLLCECNFPAISIHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVN 363
Query: 359 IVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
IVINYDMPDSAD+YLHRVGRAGRFGTKGLAITFVSSASDSD+LNQV +
Sbjct: 364 IVINYDMPDSADSYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQE 411
>gi|222618647|gb|EEE54779.1| hypothetical protein OsJ_02176 [Oryza sativa Japonica Group]
Length = 429
Score = 722 bits (1863), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/406 (87%), Positives = 373/406 (91%), Gaps = 2/406 (0%)
Query: 2 GETRDNE-YEDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRA 60
E +DNE YE++L+DYEEE D A + GYVGIHSSGFRDFLLKPELLRA
Sbjct: 4 AEVKDNEVYEEDLVDYEEEVENGTDGGAQRPP-TPPPMGYVGIHSSGFRDFLLKPELLRA 62
Query: 61 IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVL 120
I D GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLS+LQQ +P GQV ALVL
Sbjct: 63 IQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVAGQVGALVL 122
Query: 121 CHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILAL 180
CHTRELAYQICHEFERFS YLP++KVAVFYGGV+IK HKDLLKN+CP IVVGTPGRILAL
Sbjct: 123 CHTRELAYQICHEFERFSKYLPEVKVAVFYGGVHIKKHKDLLKNDCPHIVVGTPGRILAL 182
Query: 181 ARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
AR+KDLSLKNVRHFILDECDKML+SLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC
Sbjct: 183 AREKDLSLKNVRHFILDECDKMLDSLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 242
Query: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSR 300
KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSE EKNRKLNDLLDALDFNQVVIFVKSVSR
Sbjct: 243 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEAEKNRKLNDLLDALDFNQVVIFVKSVSR 302
Query: 301 AAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIV 360
AAELNKLL ECNFP+I IHSGM+QEERLTRYK FKEG+KRILVATDLVGRGIDIERVNIV
Sbjct: 303 AAELNKLLCECNFPAISIHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNIV 362
Query: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
INYDMPDSAD+YLHRVGRAGRFGTKGLAITFVSSASDSD+LNQV +
Sbjct: 363 INYDMPDSADSYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQE 408
>gi|302772815|ref|XP_002969825.1| hypothetical protein SELMODRAFT_146823 [Selaginella moellendorffii]
gi|300162336|gb|EFJ28949.1| hypothetical protein SELMODRAFT_146823 [Selaginella moellendorffii]
Length = 428
Score = 721 bits (1862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/407 (89%), Positives = 384/407 (94%), Gaps = 1/407 (0%)
Query: 1 MGETRDNE-YEDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLR 59
MGE ++N+ Y++ELLDYEEE+ APD+VA K E KKGYVGIHSSGFRDFLLKPEL+R
Sbjct: 1 MGEAKENDTYQEELLDYEEEEEAAPDAVAAKGAAETVKKGYVGIHSSGFRDFLLKPELVR 60
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
AIVD GFEHPSEVQ ECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ EP GQV ALV
Sbjct: 61 AIVDCGFEHPSEVQFECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPLKGQVAALV 120
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA 179
LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIK HKDLLKNECP IVVGTPGRIL
Sbjct: 121 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKTHKDLLKNECPHIVVGTPGRILQ 180
Query: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
L R+K+LSLK VRHFILDECDKMLESLDMRRDVQEIFK+TPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LTREKELSLKGVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQVMMFSATLSKEIRPV 240
Query: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 299
CK+FMQDPMEIYVDDEAKLTLHGLVQHYIKLSE EKNRKLNDLLDALDFNQVVIFVKSV+
Sbjct: 241 CKRFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEAEKNRKLNDLLDALDFNQVVIFVKSVN 300
Query: 300 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNI 359
RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEG+KRILVATDLVGRGIDIERVNI
Sbjct: 301 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 360
Query: 360 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
VINYDMP+SADTYLHRVGRAGRFGTKGLAITFV+S++DS++LNQV +
Sbjct: 361 VINYDMPESADTYLHRVGRAGRFGTKGLAITFVASSTDSNVLNQVQE 407
>gi|226528292|ref|NP_001149406.1| spliceosome RNA helicase BAT1 [Zea mays]
gi|195627032|gb|ACG35346.1| spliceosome RNA helicase BAT1 [Zea mays]
Length = 399
Score = 706 bits (1823), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/394 (88%), Positives = 364/394 (92%), Gaps = 1/394 (0%)
Query: 1 MGETRDNEYEDELLDYEEEDA-QAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLR 59
MGE ++N+ +E L EED + D A K GE AKKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1 MGEAKENDVYEEELLDYEEDDDKTVDGSAAKPTGEVAKKGYVGIHSSGFRDFLLKPELLR 60
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
AI D GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLS+LQQ +P GQV ALV
Sbjct: 61 AIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVAGQVAALV 120
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA 179
LCHTRELAYQICHEFERFS YL ++KVAVFYGGV+I+ HKDLLKNECP IVVGTPGRILA
Sbjct: 121 LCHTRELAYQICHEFERFSKYLTEVKVAVFYGGVHIRKHKDLLKNECPHIVVGTPGRILA 180
Query: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240
Query: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 299
CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSE EKNRKLNDLLDALDFNQVVIFVKSVS
Sbjct: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEAEKNRKLNDLLDALDFNQVVIFVKSVS 300
Query: 300 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNI 359
RAAELNKLL ECNFPSICIHSGM+QEERLTRYK FKEG+K+ILVATDLVGRGIDIERVNI
Sbjct: 301 RAAELNKLLCECNFPSICIHSGMTQEERLTRYKNFKEGHKKILVATDLVGRGIDIERVNI 360
Query: 360 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS
Sbjct: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 394
>gi|238481238|ref|NP_001154706.1| DEAD-box ATP-dependent RNA helicase 56 [Arabidopsis thaliana]
gi|332004263|gb|AED91646.1| DEAD-box ATP-dependent RNA helicase 56 [Arabidopsis thaliana]
Length = 486
Score = 675 bits (1741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/466 (76%), Positives = 379/466 (81%), Gaps = 61/466 (13%)
Query: 1 MGETRDNE-YEDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLR 59
MG+ RDNE YE+ELLDYEEED + PDS K NGEA KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1 MGDARDNEAYEEELLDYEEEDEKVPDS-GNKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 59
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ EP+PGQV+ALV
Sbjct: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALV 119
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA 179
LCHTRELAYQIC+EF RFSTYLPD KV+VFYGGVNIKIHKDLLKNECP IVVGTPGR+LA
Sbjct: 120 LCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLA 179
Query: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
LAR+KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 180 LAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
Query: 240 CKKFMQDPMEIYV-----------DDEAKLTLHGLV-----------------------Q 265
CKKFMQD +E + E +L G + +
Sbjct: 240 CKKFMQDFLENETVSVRLFSFGVENSEWRLCSFGFIVLVWVSMFRAILMFHSKTHIFEEK 299
Query: 266 HYIKLSELE-------------------------KNRKLNDLLDALDFNQVVIFVKSVSR 300
+ ++S +E KNRKLNDLLDALDFNQVVIFVKSVSR
Sbjct: 300 RWTRISPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSR 359
Query: 301 AAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIV 360
AAELNKLLVECNFPSICIHSGMSQEERLTRYK FKEG+KRILVATDLVGRGIDIERVNIV
Sbjct: 360 AAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIV 419
Query: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
INYDMPDSADTYLHRVGRAGRFGTKGLAITFV+SASDS++LNQV +
Sbjct: 420 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQE 465
>gi|296082026|emb|CBI21031.3| unnamed protein product [Vitis vinifera]
Length = 521
Score = 667 bits (1722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/335 (96%), Positives = 328/335 (97%)
Query: 72 VQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 131
+QHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ EP GQV ALVLCHTRELAYQIC
Sbjct: 137 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVTGQVAALVLCHTRELAYQIC 196
Query: 132 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 191
HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP IVVGTPGRILALARDKDL+LKNV
Sbjct: 197 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILALARDKDLALKNV 256
Query: 192 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 251
RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY
Sbjct: 257 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 316
Query: 252 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC 311
VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC
Sbjct: 317 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC 376
Query: 312 NFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADT 371
NFPSICIHSGM QEERLTRYKGFKEG+KRILVATDLVGRGIDIERVNIVINYDMPDSADT
Sbjct: 377 NFPSICIHSGMPQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADT 436
Query: 372 YLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
YLHRVGRAGRFGTKGLAITFVSSASDSD+LNQV +
Sbjct: 437 YLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQE 471
>gi|255087672|ref|XP_002505759.1| predicted protein [Micromonas sp. RCC299]
gi|226521029|gb|ACO67017.1| predicted protein [Micromonas sp. RCC299]
Length = 426
Score = 639 bits (1648), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/382 (81%), Positives = 329/382 (86%)
Query: 23 APDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAIL 82
A D A +GEA KKGYVGIHS+GFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAIL
Sbjct: 22 AADEGAGAKSGEAVKKGYVGIHSTGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAIL 81
Query: 83 GMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLP 142
GMDVICQAKSGMGKTAVFVL+ LQQ EP PG+V AL+LCHTRELAYQI HEFERFS YLP
Sbjct: 82 GMDVICQAKSGMGKTAVFVLAVLQQLEPVPGEVGALILCHTRELAYQIKHEFERFSAYLP 141
Query: 143 DIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKM 202
+ VAV +GGVNIK K LK + P I+V TPGR ALA+D D+SLK HFILDECDKM
Sbjct: 142 AVNVAVIFGGVNIKQQKAELKEKPPSIIVATPGRCKALAKDGDISLKQCGHFILDECDKM 201
Query: 203 LESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHG 262
LE LDMR DVQEIFKMTPHDKQVMMFSATLSKEIRPV KKFM DPMEIYVDDE KLTLHG
Sbjct: 202 LEQLDMRADVQEIFKMTPHDKQVMMFSATLSKEIRPVIKKFMNDPMEIYVDDETKLTLHG 261
Query: 263 LVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGM 322
LVQHYIKL+E EKNRKLNDLLDAL FNQVVIFVKSV R L+KLL ECNFPSI IH GM
Sbjct: 262 LVQHYIKLTEAEKNRKLNDLLDALMFNQVVIFVKSVQRCTYLDKLLTECNFPSIAIHRGM 321
Query: 323 SQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRF 382
SQEERL RYK FKEGNKRILVATDLV RGIDIERVNIVINYDMPD ADTYLHRVGRAGRF
Sbjct: 322 SQEERLARYKSFKEGNKRILVATDLVARGIDIERVNIVINYDMPDGADTYLHRVGRAGRF 381
Query: 383 GTKGLAITFVSSASDSDILNQV 404
GTKGLAITF+SS D+ +L+ V
Sbjct: 382 GTKGLAITFLSSDEDTAVLDAV 403
>gi|303289024|ref|XP_003063800.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454868|gb|EEH52173.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 425
Score = 639 bits (1648), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/372 (82%), Positives = 328/372 (88%)
Query: 33 GEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKS 92
GEA KKGYVGIHS+GF+DFLLKPELLRAIVD GFEHPSEVQHECIPQAILGMDVICQAKS
Sbjct: 31 GEAVKKGYVGIHSTGFKDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVICQAKS 90
Query: 93 GMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGG 152
GMGKTAVFVL+ LQQ EP PG++ AL+LCHTRELAYQI HEFERFS YLP++ V+V +GG
Sbjct: 91 GMGKTAVFVLAVLQQLEPVPGEIGALILCHTRELAYQIMHEFERFSVYLPNVNVSVVFGG 150
Query: 153 VNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDV 212
VNIK K+ L+ + P +VV TPGR+ ALA+D LSLK HFILDECDKMLE LDMR DV
Sbjct: 151 VNIKQQKEELEAKPPSVVVATPGRLKALAKDGSLSLKQCGHFILDECDKMLEQLDMRSDV 210
Query: 213 QEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSE 272
QEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM DPMEIYVDDE KLTLHGLVQHYIKL E
Sbjct: 211 QEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMNDPMEIYVDDETKLTLHGLVQHYIKLQE 270
Query: 273 LEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYK 332
EKNRKLNDLLDAL FNQVVIFVKSV R L+KLL ECNFPSI IH GMSQEERL RYK
Sbjct: 271 GEKNRKLNDLLDALMFNQVVIFVKSVQRCTYLDKLLTECNFPSIAIHRGMSQEERLARYK 330
Query: 333 GFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFV 392
FKEG+KRILVATDLV RGIDIERVNIVINYDMPD ADTYLHRVGRAGRFGTKGLAITF+
Sbjct: 331 SFKEGHKRILVATDLVARGIDIERVNIVINYDMPDGADTYLHRVGRAGRFGTKGLAITFI 390
Query: 393 SSASDSDILNQV 404
+S DS +LNQV
Sbjct: 391 ASDEDSGVLNQV 402
>gi|449441916|ref|XP_004138728.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like [Cucumis
sativus]
Length = 344
Score = 637 bits (1643), Expect = e-180, Method: Compositional matrix adjust.
Identities = 306/323 (94%), Positives = 317/323 (98%)
Query: 84 MDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPD 143
MDVICQAKSGMGKTAVFVLSTLQQ +P GQV+ALVLCHTRELAYQICHEFERFSTYLPD
Sbjct: 1 MDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSTYLPD 60
Query: 144 IKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 203
+KVAVFYGGVNIKIHKDLLKNECP IVVGTPGRILAL+RDKDLSLKNVRHFILDECDKML
Sbjct: 61 LKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILALSRDKDLSLKNVRHFILDECDKML 120
Query: 204 ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGL 263
ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGL
Sbjct: 121 ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGL 180
Query: 264 VQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMS 323
VQHYIKLSE+EKNRKLNDLLDALDFNQVVIFVKSV+RAAEL+KLLVECNFPSICIHSGMS
Sbjct: 181 VQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVNRAAELDKLLVECNFPSICIHSGMS 240
Query: 324 QEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 383
QEERLTRYKGFKEG+KRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG
Sbjct: 241 QEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 300
Query: 384 TKGLAITFVSSASDSDILNQVSK 406
TKGLAITFVSSA+DSD+LN V +
Sbjct: 301 TKGLAITFVSSAADSDVLNNVQE 323
>gi|186522071|ref|NP_850807.2| DEAD-box ATP-dependent RNA helicase 56 [Arabidopsis thaliana]
gi|332004258|gb|AED91641.1| DEAD-box ATP-dependent RNA helicase 56 [Arabidopsis thaliana]
Length = 344
Score = 637 bits (1643), Expect = e-180, Method: Compositional matrix adjust.
Identities = 305/323 (94%), Positives = 317/323 (98%)
Query: 84 MDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPD 143
MDVICQAKSGMGKTAVFVLSTLQQ EP+PGQV+ALVLCHTRELAYQIC+EF RFSTYLPD
Sbjct: 1 MDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPD 60
Query: 144 IKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 203
KV+VFYGGVNIKIHKDLLKNECP IVVGTPGR+LALAR+KDLSLKNVRHFILDECDKML
Sbjct: 61 TKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKML 120
Query: 204 ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGL 263
ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGL
Sbjct: 121 ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGL 180
Query: 264 VQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMS 323
VQHYIKLSE+EKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMS
Sbjct: 181 VQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMS 240
Query: 324 QEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 383
QEERLTRYK FKEG+KRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG
Sbjct: 241 QEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 300
Query: 384 TKGLAITFVSSASDSDILNQVSK 406
TKGLAITFV+SASDS++LNQV +
Sbjct: 301 TKGLAITFVASASDSEVLNQVQE 323
>gi|384245739|gb|EIE19232.1| nuclear RNA helicase-like protein Bat1 [Coccomyxa subellipsoidea
C-169]
Length = 435
Score = 628 bits (1619), Expect = e-177, Method: Compositional matrix adjust.
Identities = 309/404 (76%), Positives = 340/404 (84%), Gaps = 10/404 (2%)
Query: 10 EDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHP 69
EDEL+DYEE+ Q ++ K AKKGYVGIHS+GF+DFLLKPELLRAIVD GFEHP
Sbjct: 13 EDELVDYEED--QPEEANQAKGTETLAKKGYVGIHSTGFKDFLLKPELLRAIVDCGFEHP 70
Query: 70 SEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQ 129
SEVQHECIPQAILGMDVICQAKSGMGKTAVFVLS LQQ EP +V AL++CHTRELAYQ
Sbjct: 71 SEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSVLQQLEPVENEVAALIICHTRELAYQ 130
Query: 130 ICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLK 189
ICHEFERFSTY+P+++VA F+GG IK + LK P VVGTPGR+ L+R L+LK
Sbjct: 131 ICHEFERFSTYMPNVRVANFFGGFPIKQQIEQLKTNTPHAVVGTPGRLKQLSR-SGLNLK 189
Query: 190 NVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPME 249
+RHFI+DECDK+LE++DMR DVQ+IFK TPHDKQVMMFSATLS EIRP+ KKFM DPME
Sbjct: 190 TIRHFIIDECDKVLENVDMRGDVQDIFKQTPHDKQVMMFSATLSAEIRPIIKKFMSDPME 249
Query: 250 IYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLV 309
IYVDDEAKLTLHGLVQHYI L+E EKNRKLNDLLDALDFNQVVIFVKSV RA ELNKLLV
Sbjct: 250 IYVDDEAKLTLHGLVQHYIMLNEEEKNRKLNDLLDALDFNQVVIFVKSVMRAKELNKLLV 309
Query: 310 ECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDS- 368
ECNFPSICIHS QEERL YK FKEG KRILVATDLVGRGIDIERVNIVINYDMP++
Sbjct: 310 ECNFPSICIHSAQKQEERLKVYKAFKEGQKRILVATDLVGRGIDIERVNIVINYDMPETD 369
Query: 369 ------ADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
ADTYLHRVGRAGRFGTKGLAITFV+S DS +LNQV +
Sbjct: 370 ERHGNGADTYLHRVGRAGRFGTKGLAITFVASEQDSAVLNQVQE 413
>gi|413948697|gb|AFW81346.1| hypothetical protein ZEAMMB73_015937 [Zea mays]
Length = 344
Score = 624 bits (1609), Expect = e-176, Method: Compositional matrix adjust.
Identities = 301/323 (93%), Positives = 311/323 (96%)
Query: 84 MDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPD 143
MDVICQAKSGMGKTAVFVLS+LQQ +P GQV ALVLCHTRELAYQICHEFERFS YL +
Sbjct: 1 MDVICQAKSGMGKTAVFVLSSLQQIDPVAGQVAALVLCHTRELAYQICHEFERFSKYLTE 60
Query: 144 IKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 203
+KVAVFYGGV+I+ HKDLLKNECP IVVGTPGRILALARDKDLSLKNVRHFILDECDKML
Sbjct: 61 VKVAVFYGGVHIRKHKDLLKNECPHIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 120
Query: 204 ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGL 263
ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGL
Sbjct: 121 ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGL 180
Query: 264 VQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMS 323
VQHYIKLSE EKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLL ECNFPSICIHSGM+
Sbjct: 181 VQHYIKLSEAEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLCECNFPSICIHSGMT 240
Query: 324 QEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 383
QEERLTRYK FKEG+KRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG
Sbjct: 241 QEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 300
Query: 384 TKGLAITFVSSASDSDILNQVSK 406
TKGLAITFVSSASDSD+LNQV +
Sbjct: 301 TKGLAITFVSSASDSDVLNQVQE 323
>gi|357436965|ref|XP_003588758.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355477806|gb|AES59009.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 344
Score = 622 bits (1604), Expect = e-176, Method: Compositional matrix adjust.
Identities = 300/325 (92%), Positives = 313/325 (96%), Gaps = 1/325 (0%)
Query: 84 MDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPD 143
MDV+CQAKSGMGKTAVFVLSTLQQ +P PGQV+AL+LCHTRELAYQICHEFERFSTYL D
Sbjct: 1 MDVLCQAKSGMGKTAVFVLSTLQQIDPVPGQVSALILCHTRELAYQICHEFERFSTYLAD 60
Query: 144 IKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 203
+KVAVFYGGVNIK+HKDLLKNECP IVVGTPGRILALARDKDLSLKNVRHFILDECDKML
Sbjct: 61 LKVAVFYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 120
Query: 204 ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGL 263
ESLDMR+DVQ+IFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGL
Sbjct: 121 ESLDMRKDVQDIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGL 180
Query: 264 VQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMS 323
VQHYIKL E EKNRKLNDLLDALDFNQVVIFVKSVSRAAEL+KLLVECNFPSICIHSGMS
Sbjct: 181 VQHYIKLKEEEKNRKLNDLLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMS 240
Query: 324 QEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 383
QEERL RYKGFKEG+ RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG
Sbjct: 241 QEERLKRYKGFKEGHTRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 300
Query: 384 TKGLAITFVSSASDSDILNQV-SKF 407
TKGLAITFVS +SD D+LN V S+F
Sbjct: 301 TKGLAITFVSCSSDVDVLNNVQSRF 325
>gi|218188433|gb|EEC70860.1| hypothetical protein OsI_02372 [Oryza sativa Indica Group]
gi|222618650|gb|EEE54782.1| hypothetical protein OsJ_02179 [Oryza sativa Japonica Group]
Length = 344
Score = 616 bits (1589), Expect = e-174, Method: Compositional matrix adjust.
Identities = 297/323 (91%), Positives = 311/323 (96%)
Query: 84 MDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPD 143
MDVICQAKSGMGKTAVFVLS+LQQ +P GQV ALVLCHTRELAYQICHEFERFS YLP+
Sbjct: 1 MDVICQAKSGMGKTAVFVLSSLQQIDPVAGQVGALVLCHTRELAYQICHEFERFSKYLPE 60
Query: 144 IKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 203
+KVAVFYGGV+IK HKDLLKN+CP IVVGTPGRILALAR+KDLSLKNVRHFILDECDKML
Sbjct: 61 VKVAVFYGGVHIKKHKDLLKNDCPHIVVGTPGRILALAREKDLSLKNVRHFILDECDKML 120
Query: 204 ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGL 263
+SLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGL
Sbjct: 121 DSLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGL 180
Query: 264 VQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMS 323
VQHYIKLSE EKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLL ECNFP+I IHSGM+
Sbjct: 181 VQHYIKLSEAEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLCECNFPAISIHSGMT 240
Query: 324 QEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 383
QEERLTRYK FKEG+KRILVATDLVGRGIDIERVNIVINYDMPDSAD+YLHRVGRAGRFG
Sbjct: 241 QEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADSYLHRVGRAGRFG 300
Query: 384 TKGLAITFVSSASDSDILNQVSK 406
TKGLAITFVSSASDSD+LNQV +
Sbjct: 301 TKGLAITFVSSASDSDVLNQVQE 323
>gi|281342596|gb|EFB18180.1| hypothetical protein PANDA_020423 [Ailuropoda melanoleuca]
Length = 425
Score = 613 bits (1582), Expect = e-173, Method: Compositional matrix adjust.
Identities = 297/407 (72%), Positives = 342/407 (84%), Gaps = 14/407 (3%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPEL 57
+N+ ++ELLDYEE D V T A G+ A K YV IHSSGFRDFLLKPEL
Sbjct: 3 ENDVDNELLDYEE------DEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPEL 56
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA 117
LRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+
Sbjct: 57 LRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSV 116
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRI 177
LV+CHTRELA+QI E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRI
Sbjct: 117 LVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRI 176
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
LALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIR
Sbjct: 177 LALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR 236
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 297
PVC+KFMQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKS
Sbjct: 237 PVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKS 296
Query: 298 VSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERV 357
V R L +LLVE NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERV
Sbjct: 297 VQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERV 356
Query: 358 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
NI NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN V
Sbjct: 357 NIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDV 403
>gi|301789323|ref|XP_002930057.1| PREDICTED: spliceosome RNA helicase BAT1-like [Ailuropoda
melanoleuca]
gi|410958714|ref|XP_003985959.1| PREDICTED: spliceosome RNA helicase DDX39B isoform 1 [Felis catus]
Length = 428
Score = 613 bits (1582), Expect = e-173, Method: Compositional matrix adjust.
Identities = 297/407 (72%), Positives = 342/407 (84%), Gaps = 14/407 (3%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPEL 57
+N+ ++ELLDYEE D V T A G+ A K YV IHSSGFRDFLLKPEL
Sbjct: 3 ENDVDNELLDYEE------DEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPEL 56
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA 117
LRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+
Sbjct: 57 LRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSV 116
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRI 177
LV+CHTRELA+QI E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRI
Sbjct: 117 LVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRI 176
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
LALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIR
Sbjct: 177 LALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR 236
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 297
PVC+KFMQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKS
Sbjct: 237 PVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKS 296
Query: 298 VSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERV 357
V R L +LLVE NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERV
Sbjct: 297 VQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERV 356
Query: 358 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
NI NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN V
Sbjct: 357 NIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDV 403
>gi|410958716|ref|XP_003985960.1| PREDICTED: spliceosome RNA helicase DDX39B isoform 2 [Felis catus]
Length = 435
Score = 613 bits (1582), Expect = e-173, Method: Compositional matrix adjust.
Identities = 297/407 (72%), Positives = 342/407 (84%), Gaps = 14/407 (3%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPEL 57
+N+ ++ELLDYEE D V T A G+ A K YV IHSSGFRDFLLKPEL
Sbjct: 10 ENDVDNELLDYEE------DEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPEL 63
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA 117
LRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+
Sbjct: 64 LRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSV 123
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRI 177
LV+CHTRELA+QI E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRI
Sbjct: 124 LVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRI 183
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
LALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIR
Sbjct: 184 LALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR 243
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 297
PVC+KFMQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKS
Sbjct: 244 PVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKS 303
Query: 298 VSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERV 357
V R L +LLVE NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERV
Sbjct: 304 VQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERV 363
Query: 358 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
NI NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN V
Sbjct: 364 NIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDV 410
>gi|62177121|ref|NP_001014399.1| spliceosome RNA helicase DDX39B [Canis lupus familiaris]
gi|61217540|sp|Q5WR10.1|DX39B_CANFA RecName: Full=Spliceosome RNA helicase DDX39B; AltName: Full=56 kDa
U2AF65-associated protein; AltName: Full=DEAD box
protein UAP56
gi|39540669|gb|AAR27886.1| BAT1 [Canis lupus familiaris]
Length = 428
Score = 612 bits (1579), Expect = e-173, Method: Compositional matrix adjust.
Identities = 296/407 (72%), Positives = 342/407 (84%), Gaps = 14/407 (3%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPEL 57
+N+ ++ELLDYEE D V T A G+ + K YV IHSSGFRDFLLKPEL
Sbjct: 3 ENDVDNELLDYEE------DEVETAAGGDGSEAPAKKDVKGSYVSIHSSGFRDFLLKPEL 56
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA 117
LRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+
Sbjct: 57 LRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSV 116
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRI 177
LV+CHTRELA+QI E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRI
Sbjct: 117 LVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRI 176
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
LALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIR
Sbjct: 177 LALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR 236
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 297
PVC+KFMQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKS
Sbjct: 237 PVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKS 296
Query: 298 VSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERV 357
V R L +LLVE NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERV
Sbjct: 297 VQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERV 356
Query: 358 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
NI NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN V
Sbjct: 357 NIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDV 403
>gi|390461400|ref|XP_002746375.2| PREDICTED: LOW QUALITY PROTEIN: spliceosome RNA helicase DDX39B
[Callithrix jacchus]
Length = 422
Score = 612 bits (1579), Expect = e-173, Method: Compositional matrix adjust.
Identities = 296/407 (72%), Positives = 342/407 (84%), Gaps = 14/407 (3%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPEL 57
+N+ ++ELLDYE+ D V T A G+ A K YV IHSSGFRDFLLKPEL
Sbjct: 3 ENDVDNELLDYED------DEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPEL 56
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA 117
LRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+
Sbjct: 57 LRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSV 116
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRI 177
LV+CHTRELA+QI E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRI
Sbjct: 117 LVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRI 176
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
LALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIR
Sbjct: 177 LALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR 236
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 297
PVC+KFMQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKS
Sbjct: 237 PVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKS 296
Query: 298 VSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERV 357
V R L +LLVE NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERV
Sbjct: 297 VQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERV 356
Query: 358 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
NI NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN V
Sbjct: 357 NIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDV 403
>gi|355748421|gb|EHH52904.1| hypothetical protein EGM_13439 [Macaca fascicularis]
Length = 426
Score = 612 bits (1578), Expect = e-172, Method: Compositional matrix adjust.
Identities = 296/407 (72%), Positives = 342/407 (84%), Gaps = 14/407 (3%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPEL 57
+N+ ++ELLDYE+ D V T A G+ A K YV IHSSGFRDFLLKPEL
Sbjct: 3 ENDVDNELLDYED------DEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPEL 56
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA 117
LRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+
Sbjct: 57 LRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSV 116
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRI 177
LV+CHTRELA+QI E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRI
Sbjct: 117 LVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRI 176
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
LALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIR
Sbjct: 177 LALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR 236
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 297
PVC+KFMQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKS
Sbjct: 237 PVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKS 296
Query: 298 VSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERV 357
V R L +LLVE NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERV
Sbjct: 297 VQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERV 356
Query: 358 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
NI NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN V
Sbjct: 357 NIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDV 403
>gi|431921583|gb|ELK18937.1| Spliceosome RNA helicase BAT1 [Pteropus alecto]
Length = 426
Score = 612 bits (1578), Expect = e-172, Method: Compositional matrix adjust.
Identities = 294/401 (73%), Positives = 344/401 (85%), Gaps = 2/401 (0%)
Query: 6 DNEYEDELLDYEEEDAQ-APDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVD 63
+N+ ++ELLDYE+++ + A T+A + KG YV IHSSGFRDFLLKPELLRAIVD
Sbjct: 3 ENDVDNELLDYEDDEVETAAGGDGTEATAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVD 62
Query: 64 SGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHT 123
GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHT
Sbjct: 63 CGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHT 122
Query: 124 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARD 183
RELA+QI E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRILALAR+
Sbjct: 123 RELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARN 182
Query: 184 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF 243
K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIRPVC+KF
Sbjct: 183 KSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKF 242
Query: 244 MQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAE 303
MQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R
Sbjct: 243 MQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIA 302
Query: 304 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 363
L +LLVE NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNI NY
Sbjct: 303 LAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNY 362
Query: 364 DMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
DMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN V
Sbjct: 363 DMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDV 403
>gi|156602043|gb|ABU86917.1| Bat1 [Ornithorhynchus anatinus]
Length = 451
Score = 612 bits (1578), Expect = e-172, Method: Compositional matrix adjust.
Identities = 296/407 (72%), Positives = 342/407 (84%), Gaps = 14/407 (3%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPEL 57
+N+ ++ELLDYE+ D V T A G+ A K YV IHSSGFRDFLLKPEL
Sbjct: 3 ENDVDNELLDYED------DEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPEL 56
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA 117
LRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+
Sbjct: 57 LRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSV 116
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRI 177
LV+CHTRELA+QI E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRI
Sbjct: 117 LVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRI 176
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
LALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIR
Sbjct: 177 LALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR 236
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 297
PVC+KFMQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKS
Sbjct: 237 PVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKS 296
Query: 298 VSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERV 357
V R L +LLVE NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERV
Sbjct: 297 VQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERV 356
Query: 358 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
NI NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN V
Sbjct: 357 NIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDV 403
>gi|4758112|ref|NP_004631.1| spliceosome RNA helicase DDX39B [Homo sapiens]
gi|18375623|ref|NP_542165.1| spliceosome RNA helicase DDX39B [Homo sapiens]
gi|55742824|ref|NP_001005157.1| spliceosome RNA helicase DDX39B [Sus scrofa]
gi|114050801|ref|NP_001040608.1| spliceosome RNA helicase DDX39B [Macaca mulatta]
gi|166429536|ref|NP_001107635.1| spliceosome RNA helicase DDX39B [Pan troglodytes]
gi|194223324|ref|XP_001917652.1| PREDICTED: v-type proton ATPase subunit G 2 isoform 1 [Equus
caballus]
gi|338718573|ref|XP_003363850.1| PREDICTED: v-type proton ATPase subunit G 2 isoform 2 [Equus
caballus]
gi|395533821|ref|XP_003768951.1| PREDICTED: spliceosome RNA helicase DDX39B [Sarcophilus harrisii]
gi|397523218|ref|XP_003831638.1| PREDICTED: spliceosome RNA helicase DDX39B isoform 1 [Pan paniscus]
gi|397523220|ref|XP_003831639.1| PREDICTED: spliceosome RNA helicase DDX39B isoform 2 [Pan paniscus]
gi|402866418|ref|XP_003897379.1| PREDICTED: spliceosome RNA helicase DDX39B isoform 1 [Papio anubis]
gi|402866420|ref|XP_003897380.1| PREDICTED: spliceosome RNA helicase DDX39B isoform 2 [Papio anubis]
gi|402866422|ref|XP_003897381.1| PREDICTED: spliceosome RNA helicase DDX39B isoform 3 [Papio anubis]
gi|426352363|ref|XP_004043682.1| PREDICTED: spliceosome RNA helicase DDX39B isoform 1 [Gorilla
gorilla gorilla]
gi|426352365|ref|XP_004043683.1| PREDICTED: spliceosome RNA helicase DDX39B isoform 2 [Gorilla
gorilla gorilla]
gi|2500529|sp|Q13838.1|DX39B_HUMAN RecName: Full=Spliceosome RNA helicase DDX39B; AltName: Full=56 kDa
U2AF65-associated protein; AltName: Full=ATP-dependent
RNA helicase p47; AltName: Full=DEAD box protein UAP56;
AltName: Full=HLA-B-associated transcript 1 protein
gi|38502870|sp|P60024.1|DX39B_PANTR RecName: Full=Spliceosome RNA helicase DDX39B; AltName: Full=56 kDa
U2AF65-associated protein; AltName: Full=DEAD box
protein UAP56
gi|47117788|sp|Q29024.2|DX39B_PIG RecName: Full=Spliceosome RNA helicase DDX39B; AltName: Full=56 kDa
U2AF65-associated protein; AltName: Full=DEAD box
protein UAP56
gi|61217531|sp|Q5RE47.1|DX39B_PONAB RecName: Full=Spliceosome RNA helicase DDX39B; AltName: Full=56 kDa
U2AF65-associated protein; AltName: Full=DEAD box
protein UAP56
gi|61217533|sp|Q5TM17.1|DX39B_MACMU RecName: Full=Spliceosome RNA helicase DDX39B; AltName: Full=56 kDa
U2AF65-associated protein; AltName: Full=DEAD box
protein UAP56
gi|587146|emb|CAA85523.1| nuclear RNA helicase (DEAD family) [Homo sapiens]
gi|6624728|emb|CAB63856.1| putative RNA helicase [Sus scrofa]
gi|12653187|gb|AAH00361.1| HLA-B associated transcript 1 [Homo sapiens]
gi|15277213|dbj|BAB63306.1| putative ATP-dependent RNA helicase [Homo sapiens]
gi|15278164|gb|AAH13006.1| HLA-B associated transcript 1 [Homo sapiens]
gi|18181952|dbj|BAB83886.1| BAT1 [Pan troglodytes]
gi|27544432|dbj|BAC54953.1| HLA-B associated transcript 1 [Homo sapiens]
gi|32127769|dbj|BAC78161.1| ATP-dependent RNA helicase [Pan troglodytes]
gi|32880161|gb|AAP88911.1| HLA-B associated transcript 1 [Homo sapiens]
gi|55700773|dbj|BAD69728.1| HLA-B associated transcript-1 [Macaca mulatta]
gi|55726381|emb|CAH89960.1| hypothetical protein [Pongo abelii]
gi|61362641|gb|AAX42257.1| HLA-B associated transcript 1 [synthetic construct]
gi|61362649|gb|AAX42258.1| HLA-B associated transcript 1 [synthetic construct]
gi|86197992|dbj|BAE78637.1| HLA-B associated transcript 1 [Homo sapiens]
gi|90085292|dbj|BAE91387.1| unnamed protein product [Macaca fascicularis]
gi|90960864|dbj|BAE92779.1| nuclear RNA helicase [Pan troglodytes]
gi|90960868|dbj|BAE92782.1| nuclear RNA helicase [Pan troglodytes]
gi|119623809|gb|EAX03404.1| hCG2005638, isoform CRA_a [Homo sapiens]
gi|119623812|gb|EAX03407.1| hCG2005638, isoform CRA_a [Homo sapiens]
gi|119623813|gb|EAX03408.1| hCG2005638, isoform CRA_a [Homo sapiens]
gi|119623814|gb|EAX03409.1| hCG2005638, isoform CRA_a [Homo sapiens]
gi|119623815|gb|EAX03410.1| hCG2005638, isoform CRA_a [Homo sapiens]
gi|119623816|gb|EAX03411.1| hCG2005638, isoform CRA_a [Homo sapiens]
gi|119623818|gb|EAX03413.1| hCG2005638, isoform CRA_a [Homo sapiens]
gi|123981956|gb|ABM82807.1| HLA-B associated transcript 1 [synthetic construct]
gi|123996783|gb|ABM85993.1| HLA-B associated transcript 1 [synthetic construct]
gi|162138207|gb|ABX82809.1| HLA-B-associated protein 1 [Sus scrofa]
gi|168985556|emb|CAQ10634.1| HLA-B associated transcript 1 [Homo sapiens]
gi|261859894|dbj|BAI46469.1| HLA-B associated transcript 1 [synthetic construct]
gi|266634526|dbj|BAI49420.1| HLA-B associated transcript 1 [Microcebus murinus]
gi|380783493|gb|AFE63622.1| spliceosome RNA helicase DDX39B [Macaca mulatta]
gi|380783495|gb|AFE63623.1| spliceosome RNA helicase DDX39B [Macaca mulatta]
gi|383411769|gb|AFH29098.1| spliceosome RNA helicase DDX39B [Macaca mulatta]
gi|383411771|gb|AFH29099.1| spliceosome RNA helicase DDX39B [Macaca mulatta]
gi|384949414|gb|AFI38312.1| spliceosome RNA helicase DDX39B [Macaca mulatta]
gi|410214944|gb|JAA04691.1| HLA-B associated transcript 1 [Pan troglodytes]
gi|410214946|gb|JAA04692.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B [Pan troglodytes]
gi|410247506|gb|JAA11720.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B [Pan troglodytes]
gi|410247508|gb|JAA11721.1| HLA-B associated transcript 1 [Pan troglodytes]
gi|410340525|gb|JAA39209.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B [Pan troglodytes]
gi|410340527|gb|JAA39210.1| HLA-B associated transcript 1 [Pan troglodytes]
Length = 428
Score = 612 bits (1578), Expect = e-172, Method: Compositional matrix adjust.
Identities = 296/407 (72%), Positives = 342/407 (84%), Gaps = 14/407 (3%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPEL 57
+N+ ++ELLDYE+ D V T A G+ A K YV IHSSGFRDFLLKPEL
Sbjct: 3 ENDVDNELLDYED------DEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPEL 56
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA 117
LRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+
Sbjct: 57 LRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSV 116
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRI 177
LV+CHTRELA+QI E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRI
Sbjct: 117 LVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRI 176
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
LALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIR
Sbjct: 177 LALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR 236
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 297
PVC+KFMQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKS
Sbjct: 237 PVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKS 296
Query: 298 VSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERV 357
V R L +LLVE NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERV
Sbjct: 297 VQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERV 356
Query: 358 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
NI NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN V
Sbjct: 357 NIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDV 403
>gi|9790069|ref|NP_062667.1| spliceosome RNA helicase Ddx39b [Mus musculus]
gi|51592092|ref|NP_579834.2| spliceosome RNA helicase Ddx39b [Rattus norvegicus]
gi|356995868|ref|NP_001239386.1| spliceosome RNA helicase Ddx39b [Mus musculus]
gi|61217662|sp|Q9Z1N5.1|DX39B_MOUSE RecName: Full=Spliceosome RNA helicase Ddx39b; AltName: Full=56 kDa
U2AF65-associated protein; AltName: Full=DEAD box
protein UAP56; AltName: Full=HLA-B-associated transcript
1 protein
gi|61252099|sp|Q63413.3|DX39B_RAT RecName: Full=Spliceosome RNA helicase Ddx39b; AltName: Full=56 kDa
U2AF65-associated protein; AltName: Full=ATP-dependent
RNA helicase p47; AltName: Full=DEAD box protein Uap56
gi|4809332|gb|AAD30177.1|AC007080_3 BAT1 [Mus musculus]
gi|4235116|gb|AAD13115.1| nuclear RNA helicase Bat1 [Mus musculus]
gi|15029704|gb|AAH11067.1| HLA-B-associated transcript 1A [Mus musculus]
gi|17529570|emb|CAC85694.1| putative RNA helicase [Rattus norvegicus]
gi|22137623|gb|AAH24859.1| HLA-B-associated transcript 1A [Mus musculus]
gi|26341686|dbj|BAC34505.1| unnamed protein product [Mus musculus]
gi|26353988|dbj|BAC40624.1| unnamed protein product [Mus musculus]
gi|32964852|gb|AAP91685.1| HLA-B associated transcript 1 [Mus musculus]
gi|32964854|gb|AAP91686.1| HLA-B associated transcript 1 [Mus musculus]
gi|51329823|gb|AAH80243.1| HLA-B associated transcript 1 [Rattus norvegicus]
gi|149028103|gb|EDL83554.1| HLA-B-associated transcript 1A, isoform CRA_a [Rattus norvegicus]
Length = 428
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 294/401 (73%), Positives = 345/401 (86%), Gaps = 2/401 (0%)
Query: 6 DNEYEDELLDYEEEDAQ-APDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVD 63
+N+ ++ELLDYE+++ + A + T+A + KG YV IHSSGFRDFLLKPELLRAIVD
Sbjct: 3 ENDVDNELLDYEDDEVETAAGADGTEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVD 62
Query: 64 SGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHT 123
GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHT
Sbjct: 63 CGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHT 122
Query: 124 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARD 183
RELA+QI E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRILALAR+
Sbjct: 123 RELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARN 182
Query: 184 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF 243
K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIRPVC+KF
Sbjct: 183 KSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKF 242
Query: 244 MQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAE 303
MQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R
Sbjct: 243 MQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIA 302
Query: 304 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 363
L +LLVE NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNI NY
Sbjct: 303 LAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNY 362
Query: 364 DMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
DMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN V
Sbjct: 363 DMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDV 403
>gi|30585031|gb|AAP36788.1| Homo sapiens HLA-B associated transcript 1 [synthetic construct]
gi|60654019|gb|AAX29702.1| HLA-B associated transcript 1 [synthetic construct]
gi|60654021|gb|AAX29703.1| HLA-B associated transcript 1 [synthetic construct]
Length = 429
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 296/407 (72%), Positives = 342/407 (84%), Gaps = 14/407 (3%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPEL 57
+N+ ++ELLDYE+ D V T A G+ A K YV IHSSGFRDFLLKPEL
Sbjct: 3 ENDVDNELLDYED------DEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPEL 56
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA 117
LRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+
Sbjct: 57 LRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSV 116
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRI 177
LV+CHTRELA+QI E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRI
Sbjct: 117 LVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRI 176
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
LALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIR
Sbjct: 177 LALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR 236
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 297
PVC+KFMQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKS
Sbjct: 237 PVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKS 296
Query: 298 VSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERV 357
V R L +LLVE NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERV
Sbjct: 297 VQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERV 356
Query: 358 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
NI NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN V
Sbjct: 357 NIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDV 403
>gi|397523222|ref|XP_003831640.1| PREDICTED: spliceosome RNA helicase DDX39B isoform 3 [Pan paniscus]
Length = 443
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 296/407 (72%), Positives = 342/407 (84%), Gaps = 14/407 (3%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPEL 57
+N+ ++ELLDYE+ D V T A G+ A K YV IHSSGFRDFLLKPEL
Sbjct: 18 ENDVDNELLDYED------DEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPEL 71
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA 117
LRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+
Sbjct: 72 LRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSV 131
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRI 177
LV+CHTRELA+QI E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRI
Sbjct: 132 LVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRI 191
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
LALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIR
Sbjct: 192 LALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR 251
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 297
PVC+KFMQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKS
Sbjct: 252 PVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKS 311
Query: 298 VSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERV 357
V R L +LLVE NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERV
Sbjct: 312 VQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERV 371
Query: 358 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
NI NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN V
Sbjct: 372 NIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDV 418
>gi|62858405|ref|NP_001016000.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A [Xenopus (Silurana)
tropicalis]
gi|89271292|emb|CAJ82673.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 [Xenopus (Silurana)
tropicalis]
gi|89271293|emb|CAJ82681.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 [Xenopus (Silurana)
tropicalis]
gi|89271296|emb|CAJ82702.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 [Xenopus (Silurana)
tropicalis]
gi|187469409|gb|AAI67122.1| hypothetical protein LOC548754 [Xenopus (Silurana) tropicalis]
gi|213624204|gb|AAI70784.1| hypothetical protein LOC548754 [Xenopus (Silurana) tropicalis]
gi|213627133|gb|AAI70782.1| hypothetical protein LOC548754 [Xenopus (Silurana) tropicalis]
Length = 427
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 291/400 (72%), Positives = 335/400 (83%), Gaps = 1/400 (0%)
Query: 6 DNEYEDELLDYEEED-AQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDS 64
+ + E+ELLDYEE+D QAP A + K YV IHSSGFRDFLLKPELLR+IVD
Sbjct: 3 EQDVENELLDYEEDDEPQAPAETAAPIARKEVKGSYVSIHSSGFRDFLLKPELLRSIVDC 62
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFEHPSEVQHECIPQAILGMD++CQAKSGMGKTAVFVL+TLQQTE GQVT LV+CHTR
Sbjct: 63 GFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQTEAVEGQVTVLVMCHTR 122
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDK 184
ELA+QI E+ERFS Y+P +KVAVF+GG++IK +D ++ CP IVVGTPGRILAL R K
Sbjct: 123 ELAFQISKEYERFSKYMPTVKVAVFFGGLSIKKDEDTIRKSCPHIVVGTPGRILALVRSK 182
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 244
L+LKNV+HF+LDECDKMLE LDMRRDVQEIF++TPH+KQ MMFSATLSKEIRPVC+KFM
Sbjct: 183 ILNLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFM 242
Query: 245 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 304
QDPME++VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L
Sbjct: 243 QDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMAL 302
Query: 305 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 364
+LL E NFP+I IH MSQEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYD
Sbjct: 303 AQLLTEQNFPAIAIHRNMSQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYD 362
Query: 365 MPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
MP+ +DTYLHRV RAGRFGTKGLAITFVS D+ ILN V
Sbjct: 363 MPEDSDTYLHRVARAGRFGTKGLAITFVSDEEDAKILNDV 402
>gi|75832045|ref|NP_001028801.1| spliceosome RNA helicase DDX39B [Bos taurus]
gi|426250582|ref|XP_004019014.1| PREDICTED: spliceosome RNA helicase DDX39B isoform 1 [Ovis aries]
gi|426250584|ref|XP_004019015.1| PREDICTED: spliceosome RNA helicase DDX39B isoform 2 [Ovis aries]
gi|122140442|sp|Q3T147.1|DX39B_BOVIN RecName: Full=Spliceosome RNA helicase DDX39B; AltName: Full=56 kDa
U2AF65-associated protein; AltName: Full=DEAD box
protein UAP56
gi|74353855|gb|AAI02132.1| HLA-B associated transcript 1 [Bos taurus]
gi|296474278|tpg|DAA16393.1| TPA: spliceosome RNA helicase BAT1 [Bos taurus]
Length = 428
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 296/407 (72%), Positives = 341/407 (83%), Gaps = 14/407 (3%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPEL 57
+N+ ++ELLDYE+ D V T A G+ A K YV IHSSGFRDFLLKPEL
Sbjct: 3 ENDVDNELLDYED------DEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPEL 56
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA 117
LRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+
Sbjct: 57 LRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSV 116
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRI 177
LV+CHTRELA+QI E+ERFS Y+P +KVAVF+GG++IK +++LK CP IVVGTPGRI
Sbjct: 117 LVMCHTRELAFQISKEYERFSKYMPSVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRI 176
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
LALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIR
Sbjct: 177 LALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR 236
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 297
PVC+KFMQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKS
Sbjct: 237 PVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKS 296
Query: 298 VSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERV 357
V R L +LLVE NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERV
Sbjct: 297 VQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERV 356
Query: 358 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
NI NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN V
Sbjct: 357 NIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDV 403
>gi|224013446|ref|XP_002296387.1| dead box family RNA helicase [Thalassiosira pseudonana CCMP1335]
gi|220968739|gb|EED87083.1| dead box family RNA helicase [Thalassiosira pseudonana CCMP1335]
Length = 433
Score = 611 bits (1576), Expect = e-172, Method: Compositional matrix adjust.
Identities = 291/410 (70%), Positives = 350/410 (85%), Gaps = 9/410 (2%)
Query: 7 NEYEDELLDYEEEDAQAPDSVATKANGEA--AKKG-YVGIHSSGFRDFLLKPELLRAIVD 63
NE + +L+DY+EE+ + A+G++ KKG YVGIH+SGF+DF+LKPE LRA+VD
Sbjct: 5 NEEDHDLVDYDEEEEEENVVAEKTADGDSKEVKKGHYVGIHASGFKDFILKPECLRAVVD 64
Query: 64 SGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNP-----GQVTAL 118
GFEHPSEVQHECIPQA+LGMD++CQAKSGMGKTAVFVL+TL Q PN QV+ L
Sbjct: 65 CGFEHPSEVQHECIPQAVLGMDIVCQAKSGMGKTAVFVLATLHQLNPNAFPAGENQVSVL 124
Query: 119 VLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRIL 178
VLCHTRELA+QI HE+ERFS YLP++K AVFYGGV+IK ++D+LKN+CP IVVGTPGR+L
Sbjct: 125 VLCHTRELAFQIAHEYERFSKYLPEVKTAVFYGGVSIKTNRDVLKNDCPHIVVGTPGRVL 184
Query: 179 ALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRP 238
LAR+K L L +++HF+LDECD++LESLDMRRD+QEIF+MTPH+KQVMMFSATLSKEIRP
Sbjct: 185 GLAREKTLKLDHIKHFVLDECDRILESLDMRRDIQEIFRMTPHEKQVMMFSATLSKEIRP 244
Query: 239 VCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSV 298
VCKKF QDPMEIYVDD+ KLTLHGL +Y+KL+E EKNRKLNDLLDAL+FNQVVIFV V
Sbjct: 245 VCKKFCQDPMEIYVDDDTKLTLHGLQLYYVKLAEAEKNRKLNDLLDALEFNQVVIFVSKV 304
Query: 299 SRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVN 358
+RA ELN+LL ECNFPSICIH+G Q+ER+ +YK FKE N RILV+TDL GRGIDIERVN
Sbjct: 305 ARANELNRLLTECNFPSICIHAGQKQDERIAKYKSFKEFNARILVSTDLFGRGIDIERVN 364
Query: 359 IVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV-SKF 407
+VINYD PD +D +LHRVGRAGRFGTKGLAI+F+SS D +IL++V S+F
Sbjct: 365 VVINYDFPDDSDQFLHRVGRAGRFGTKGLAISFISSEPDQEILDKVQSRF 414
>gi|327266482|ref|XP_003218034.1| PREDICTED: spliceosome RNA helicase BAT1-like [Anolis carolinensis]
Length = 428
Score = 611 bits (1576), Expect = e-172, Method: Compositional matrix adjust.
Identities = 295/407 (72%), Positives = 341/407 (83%), Gaps = 14/407 (3%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPEL 57
+N+ ++ELLDYE+ D V +A GE K YV IHSSGFRDFLLKPEL
Sbjct: 3 ENDVDNELLDYED------DEVENQAAGEGVDVPSKKDVKGSYVSIHSSGFRDFLLKPEL 56
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA 117
LRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+
Sbjct: 57 LRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSV 116
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRI 177
LV+CHTRELA+QI E+ERFS Y+P +KVAVF+GG++IK +++LK CP IVVGTPGRI
Sbjct: 117 LVMCHTRELAFQISKEYERFSKYMPSVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRI 176
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
LALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIR
Sbjct: 177 LALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR 236
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 297
PVC+KFMQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKS
Sbjct: 237 PVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKS 296
Query: 298 VSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERV 357
V R L +LLVE NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERV
Sbjct: 297 VQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERV 356
Query: 358 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
NI NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN+V
Sbjct: 357 NIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNEV 403
>gi|444721087|gb|ELW61840.1| Spliceosome RNA helicase DDX39B [Tupaia chinensis]
Length = 428
Score = 611 bits (1576), Expect = e-172, Method: Compositional matrix adjust.
Identities = 295/405 (72%), Positives = 341/405 (84%), Gaps = 14/405 (3%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPEL 57
+N+ ++ELLDYE+ D V T A G+ A K YV IHSSGFRDFLLKPEL
Sbjct: 3 ENDVDNELLDYED------DEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPEL 56
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA 117
LRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+
Sbjct: 57 LRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSV 116
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRI 177
LV+CHTRELA+QI E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRI
Sbjct: 117 LVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRI 176
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
LALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIR
Sbjct: 177 LALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR 236
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 297
PVC+KFMQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKS
Sbjct: 237 PVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKS 296
Query: 298 VSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERV 357
V R L +LLVE NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERV
Sbjct: 297 VQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERV 356
Query: 358 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILN 402
NI NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN
Sbjct: 357 NIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILN 401
>gi|38372907|ref|NP_932099.2| ATP-dependent RNA helicase DDX39A [Mus musculus]
gi|61213001|sp|Q8VDW0.1|DX39A_MOUSE RecName: Full=ATP-dependent RNA helicase DDX39A; AltName: Full=DEAD
box protein 39
gi|18044894|gb|AAH20134.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 [Mus musculus]
gi|74181505|dbj|BAE30021.1| unnamed protein product [Mus musculus]
gi|74184027|dbj|BAE37049.1| unnamed protein product [Mus musculus]
gi|74207612|dbj|BAE40052.1| unnamed protein product [Mus musculus]
gi|74219249|dbj|BAE26758.1| unnamed protein product [Mus musculus]
gi|74226811|dbj|BAE27051.1| unnamed protein product [Mus musculus]
gi|148678969|gb|EDL10916.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 39, isoform CRA_b [Mus
musculus]
Length = 427
Score = 610 bits (1574), Expect = e-172, Method: Compositional matrix adjust.
Identities = 288/400 (72%), Positives = 338/400 (84%), Gaps = 1/400 (0%)
Query: 6 DNEYEDELLDYEE-EDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDS 64
+ + E+ELLDY+E E+ QAP + K YV IHSSGFRDFLLKPELLRAIVD
Sbjct: 3 EQDVENELLDYDEDEEPQAPQESTPAPPKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDC 62
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTR
Sbjct: 63 GFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVSVLVMCHTR 122
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDK 184
ELA+QI E+ERFS Y+P +KV+VF+GG++IK +D+LK CP +VVGTPGRILAL R +
Sbjct: 123 ELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEDVLKKNCPHVVVGTPGRILALVRSR 182
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 244
L+L+NV+HF+LDECDKMLE LDMRRDVQEIF++TPH+KQ MMFSATLSKEIRPVC+KFM
Sbjct: 183 SLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFM 242
Query: 245 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 304
QDPME++VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L
Sbjct: 243 QDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMAL 302
Query: 305 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 364
+LLVE NFP+I IH GM+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYD
Sbjct: 303 AQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYD 362
Query: 365 MPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
MP+ +DTYLHRV RAGRFGTKGLA+TFVS +D+ ILN V
Sbjct: 363 MPEDSDTYLHRVARAGRFGTKGLAVTFVSDENDAKILNDV 402
>gi|74192407|dbj|BAE43010.1| unnamed protein product [Mus musculus]
Length = 427
Score = 610 bits (1573), Expect = e-172, Method: Compositional matrix adjust.
Identities = 287/400 (71%), Positives = 338/400 (84%), Gaps = 1/400 (0%)
Query: 6 DNEYEDELLDYEE-EDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDS 64
+ + E+ELLDY+E E+ QAP + K YV IHSSGFRDFLLKPELLRAIVD
Sbjct: 3 EQDVENELLDYDEDEEPQAPQESTPAPPKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDC 62
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+T+QQ EP GQV+ LV+CHTR
Sbjct: 63 GFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATMQQIEPVNGQVSVLVMCHTR 122
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDK 184
ELA+QI E+ERFS Y+P +KV+VF+GG++IK +D+LK CP +VVGTPGRILAL R +
Sbjct: 123 ELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEDVLKKNCPHVVVGTPGRILALVRSR 182
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 244
L+L+NV+HF+LDECDKMLE LDMRRDVQEIF++TPH+KQ MMFSATLSKEIRPVC+KFM
Sbjct: 183 SLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFM 242
Query: 245 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 304
QDPME++VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L
Sbjct: 243 QDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMAL 302
Query: 305 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 364
+LLVE NFP+I IH GM+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYD
Sbjct: 303 AQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYD 362
Query: 365 MPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
MP+ +DTYLHRV RAGRFGTKGLA+TFVS +D+ ILN V
Sbjct: 363 MPEDSDTYLHRVARAGRFGTKGLAVTFVSDENDAKILNDV 402
>gi|355561520|gb|EHH18152.1| hypothetical protein EGK_14701 [Macaca mulatta]
Length = 426
Score = 610 bits (1573), Expect = e-172, Method: Compositional matrix adjust.
Identities = 295/407 (72%), Positives = 342/407 (84%), Gaps = 14/407 (3%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPEL 57
+N+ ++ELLDYE+ D V T A G+ A K YV IHSSGFRDFLLKPEL
Sbjct: 3 ENDVDNELLDYED------DEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPEL 56
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA 117
LRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+
Sbjct: 57 LRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSV 116
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRI 177
LV+CHTRELA+QI E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRI
Sbjct: 117 LVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRI 176
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
LALA++K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIR
Sbjct: 177 LALAQNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR 236
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 297
PVC+KFMQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKS
Sbjct: 237 PVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKS 296
Query: 298 VSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERV 357
V R L +LLVE NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERV
Sbjct: 297 VQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERV 356
Query: 358 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
NI NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN V
Sbjct: 357 NIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDV 403
>gi|62897383|dbj|BAD96632.1| HLA-B associated transcript 1 variant [Homo sapiens]
Length = 428
Score = 610 bits (1573), Expect = e-172, Method: Compositional matrix adjust.
Identities = 295/407 (72%), Positives = 342/407 (84%), Gaps = 14/407 (3%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPEL 57
+N+ ++ELLDYE+ D V T A G+ A K YV IHSSGFRDFLLKPEL
Sbjct: 3 ENDVDNELLDYED------DEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPEL 56
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA 117
LRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+
Sbjct: 57 LRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSV 116
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRI 177
LV+CHTRELA+QI E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRI
Sbjct: 117 LVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRI 176
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
LALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIR
Sbjct: 177 LALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR 236
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 297
PVC+KFMQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FN+VVIFVKS
Sbjct: 237 PVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNRVVIFVKS 296
Query: 298 VSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERV 357
V R L +LLVE NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERV
Sbjct: 297 VQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERV 356
Query: 358 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
NI NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN V
Sbjct: 357 NIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDV 403
>gi|348576520|ref|XP_003474035.1| PREDICTED: spliceosome RNA helicase DDX39B-like [Cavia porcellus]
Length = 428
Score = 610 bits (1573), Expect = e-172, Method: Compositional matrix adjust.
Identities = 295/408 (72%), Positives = 341/408 (83%), Gaps = 14/408 (3%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPEL 57
+N+ ++ELLDYE+ D V T A G+ A K YV IHSSGFRDFLLKPEL
Sbjct: 3 ENDVDNELLDYED------DEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPEL 56
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA 117
LRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+
Sbjct: 57 LRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSV 116
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRI 177
LV+CHTRELA+QI E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRI
Sbjct: 117 LVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRI 176
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
LALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATL KEIR
Sbjct: 177 LALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLGKEIR 236
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 297
PVC+KFMQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKS
Sbjct: 237 PVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKS 296
Query: 298 VSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERV 357
V R L +LLVE NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERV
Sbjct: 297 VQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERV 356
Query: 358 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVS 405
NI NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN V
Sbjct: 357 NIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQ 404
>gi|225710008|gb|ACO10850.1| ATP-dependent RNA helicase DDX39 [Caligus rogercresseyi]
Length = 426
Score = 610 bits (1573), Expect = e-172, Method: Compositional matrix adjust.
Identities = 294/402 (73%), Positives = 335/402 (83%), Gaps = 5/402 (1%)
Query: 7 NEYEDELLDYEEEDAQAPDSVATKANGEAAKK----GYVGIHSSGFRDFLLKPELLRAIV 62
E E +LLDYEEED P +V T++NG KK YV IHSSGFRDFLLKPE+LRAI
Sbjct: 2 TEVEADLLDYEEEDTPTP-AVTTESNGSEHKKEVKGTYVSIHSSGFRDFLLKPEILRAIG 60
Query: 63 DSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCH 122
D GFEHPSEVQHECIPQA+LGMD++ QAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CH
Sbjct: 61 DCGFEHPSEVQHECIPQAVLGMDILSQAKSGMGKTAVFVLATLQQMEPVDGQVSVLVMCH 120
Query: 123 TRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALAR 182
TRELA+QI E+ERFS YLP KV VF+GG+ I + +LK+ CP IVVGTPGRILAL R
Sbjct: 121 TRELAFQISKEYERFSKYLPGAKVGVFFGGLAISKDEQVLKSNCPHIVVGTPGRILALVR 180
Query: 183 DKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKK 242
K L+LKNV+HFILDECDKMLE LDMRRDVQEIF+ TPH+KQVMMFSATLSK++RPVCKK
Sbjct: 181 SKKLNLKNVKHFILDECDKMLEQLDMRRDVQEIFRSTPHEKQVMMFSATLSKDVRPVCKK 240
Query: 243 FMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAA 302
FMQDPME+YVDDEAKLTLHGL QHY+KL + EKNRKL +LLD L+FNQVVIFVKSV R
Sbjct: 241 FMQDPMEVYVDDEAKLTLHGLQQHYVKLKDTEKNRKLFELLDVLEFNQVVIFVKSVQRCV 300
Query: 303 ELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVIN 362
L +LL+E NFP+I IH GM+QEERL+RY+ FK+ KRILVAT+L GRG+DIERVNIV N
Sbjct: 301 ALAQLLIEQNFPAIAIHRGMNQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFN 360
Query: 363 YDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
YDMP+ DTYLHRV RAGRFGTKGLAITFVS SD+ LN+V
Sbjct: 361 YDMPEDTDTYLHRVARAGRFGTKGLAITFVSDESDAKTLNEV 402
>gi|432880279|ref|XP_004073639.1| PREDICTED: ATP-dependent RNA helicase DDX39A-like [Oryzias latipes]
Length = 427
Score = 610 bits (1572), Expect = e-172, Method: Compositional matrix adjust.
Identities = 290/401 (72%), Positives = 340/401 (84%), Gaps = 3/401 (0%)
Query: 6 DNEYEDELLDYEEEDAQ--APDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVD 63
+N+ ++ELLDYE++D AP+S A E K YV IHSSGFRDFLLKPELLRAI+D
Sbjct: 3 ENDVDNELLDYEDDDEPQGAPESAAPTGKKEV-KGSYVSIHSSGFRDFLLKPELLRAIID 61
Query: 64 SGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHT 123
GFEHPSEVQHECIPQAILGMD++CQAKSGMGKTAVFVL+TLQQ EP GQVT LV+CHT
Sbjct: 62 CGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVTVLVMCHT 121
Query: 124 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARD 183
RELA+QI E+ERFS Y+P +K AVF+GG+ IK +D+LK CP IVVGTPGRILAL R+
Sbjct: 122 RELAFQISKEYERFSKYMPTVKAAVFFGGMAIKNDEDVLKKNCPHIVVGTPGRILALIRN 181
Query: 184 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF 243
K L+LKN++HF+LDECDKMLE LDMRRDVQ+IF++TPH+KQVMMFSATLSKEIRPVC+KF
Sbjct: 182 KTLNLKNIKHFVLDECDKMLEQLDMRRDVQDIFRITPHEKQVMMFSATLSKEIRPVCRKF 241
Query: 244 MQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAE 303
MQDPME++VDDE KLTLHGL Q+Y KL + EKNRKL DLLD L+FNQVVIFVKSV R
Sbjct: 242 MQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCIA 301
Query: 304 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 363
L++LLVE NFP+I IH GM+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NY
Sbjct: 302 LSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNY 361
Query: 364 DMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
DMP+ +DTYLHRV RAGRFGTKGLA+TFVS +D+ LN V
Sbjct: 362 DMPEDSDTYLHRVARAGRFGTKGLAVTFVSDETDAKTLNDV 402
>gi|74204289|dbj|BAE39902.1| unnamed protein product [Mus musculus]
Length = 427
Score = 610 bits (1572), Expect = e-172, Method: Compositional matrix adjust.
Identities = 287/400 (71%), Positives = 338/400 (84%), Gaps = 1/400 (0%)
Query: 6 DNEYEDELLDYEE-EDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDS 64
+ + E+ELLDY+E E+ QAP + K YV IHSSGFRDF+LKPELLRAIVD
Sbjct: 3 EQDVENELLDYDEDEEPQAPQESTPAPPKKDVKGSYVSIHSSGFRDFVLKPELLRAIVDC 62
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTR
Sbjct: 63 GFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVSVLVMCHTR 122
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDK 184
ELA+QI E+ERFS Y+P +KV+VF+GG++IK +D+LK CP +VVGTPGRILAL R +
Sbjct: 123 ELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEDVLKKNCPHVVVGTPGRILALVRSR 182
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 244
L+L+NV+HF+LDECDKMLE LDMRRDVQEIF++TPH+KQ MMFSATLSKEIRPVC+KFM
Sbjct: 183 SLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFM 242
Query: 245 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 304
QDPME++VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L
Sbjct: 243 QDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMAL 302
Query: 305 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 364
+LLVE NFP+I IH GM+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYD
Sbjct: 303 AQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYD 362
Query: 365 MPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
MP+ +DTYLHRV RAGRFGTKGLA+TFVS +D+ ILN V
Sbjct: 363 MPEDSDTYLHRVARAGRFGTKGLAVTFVSDENDAKILNDV 402
>gi|334323693|ref|XP_001368591.2| PREDICTED: spliceosome RNA helicase DDX39B [Monodelphis domestica]
Length = 466
Score = 610 bits (1572), Expect = e-172, Method: Compositional matrix adjust.
Identities = 296/407 (72%), Positives = 342/407 (84%), Gaps = 14/407 (3%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPEL 57
+N+ ++ELLDYE+ D V T A G+ A K YV IHSSGFRDFLLKPEL
Sbjct: 3 ENDVDNELLDYED------DEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPEL 56
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA 117
LRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+
Sbjct: 57 LRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSV 116
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRI 177
LV+CHTRELA+QI E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRI
Sbjct: 117 LVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRI 176
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
LALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIR
Sbjct: 177 LALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR 236
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 297
PVC+KFMQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKS
Sbjct: 237 PVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKS 296
Query: 298 VSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERV 357
V R L +LLVE NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERV
Sbjct: 297 VQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERV 356
Query: 358 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
NI NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN V
Sbjct: 357 NIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDV 403
>gi|354479467|ref|XP_003501931.1| PREDICTED: ATP-dependent RNA helicase DDX39A [Cricetulus griseus]
Length = 427
Score = 610 bits (1572), Expect = e-172, Method: Compositional matrix adjust.
Identities = 288/400 (72%), Positives = 337/400 (84%), Gaps = 1/400 (0%)
Query: 6 DNEYEDELLDYEE-EDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDS 64
+ + E+ELLDY+E E+ QAP + K YV IHSSGFRDFLLKPELLRAIVD
Sbjct: 3 EQDVENELLDYDEDEEPQAPQESTPAPPKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDC 62
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTR
Sbjct: 63 GFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPINGQVSVLVMCHTR 122
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDK 184
ELA+QI E+ERFS Y+P +KV+VF+GG++IK +D+LK CP +VVGTPGRILAL R +
Sbjct: 123 ELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEDVLKKNCPHVVVGTPGRILALVRSR 182
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 244
L+L+NV+HF+LDECDKMLE LDMRRDVQEIF++TPH+KQ MMFSATLSKEIRPVC+KFM
Sbjct: 183 SLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFM 242
Query: 245 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 304
QDPME++VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L
Sbjct: 243 QDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMAL 302
Query: 305 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 364
+LLVE NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYD
Sbjct: 303 AQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYD 362
Query: 365 MPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
MP+ +DTYLHRV RAGRFGTKGLA+TFVS +D+ ILN V
Sbjct: 363 MPEDSDTYLHRVARAGRFGTKGLAVTFVSDENDAKILNDV 402
>gi|384487135|gb|EIE79315.1| ATP-dependent RNA helicase uap56 [Rhizopus delemar RA 99-880]
Length = 434
Score = 609 bits (1571), Expect = e-172, Method: Compositional matrix adjust.
Identities = 296/413 (71%), Positives = 347/413 (84%), Gaps = 15/413 (3%)
Query: 8 EYEDELLDYEEEDAQ-------APDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLR 59
++ D+L+DYEEED Q AP + + + KKG YVGIHS+GFRDFLLKPELLR
Sbjct: 5 DHADDLIDYEEEDEQTLQQETIAPQTDIVEEEDKKDKKGSYVGIHSTGFRDFLLKPELLR 64
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
+IVD GFEHPSEVQ ECIPQ+ILGMDV+CQAKSGMGKTAVFVL+TLQQ EP G+V+ +V
Sbjct: 65 SIVDCGFEHPSEVQQECIPQSILGMDVLCQAKSGMGKTAVFVLATLQQLEPVNGEVSVIV 124
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGV----NIKIHKDLLKNECPQIVVGTPG 175
LCHTRELA+QI +E+ RFS YLPDI+ VFYGGV +++ KD KN+CP I+VGTPG
Sbjct: 125 LCHTRELAFQIKNEYARFSKYLPDIRTEVFYGGVPMTKDVETLKD--KNKCPHILVGTPG 182
Query: 176 RILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKE 235
R+LAL RDK L L NV+HF+LDECDKMLE LDMRRDVQ+IF+ TPH KQVMMF+ATL+K+
Sbjct: 183 RVLALIRDKHLKLSNVKHFVLDECDKMLEQLDMRRDVQDIFRATPHHKQVMMFTATLAKD 242
Query: 236 IRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFV 295
+RPVCKKFMQ+P+EIYVDDEAKLTLHGL Q Y KL E EKNRKLNDLLD+L+FNQV IFV
Sbjct: 243 MRPVCKKFMQNPLEIYVDDEAKLTLHGLQQFYKKLEEREKNRKLNDLLDSLEFNQVCIFV 302
Query: 296 KSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIE 355
+SVSRA ELN++L +CNFPSICIHS M+Q+ER+ RYK FKE KRI+VATD+ GRGIDIE
Sbjct: 303 RSVSRANELNRILSDCNFPSICIHSQMTQDERIKRYKSFKEFEKRIMVATDIFGRGIDIE 362
Query: 356 RVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV-SKF 407
RVNIVINYDMPDSAD+YLHRVGRAGRFGTKGL ITFVS +D+ +LN V S+F
Sbjct: 363 RVNIVINYDMPDSADSYLHRVGRAGRFGTKGLGITFVSDENDTQVLNDVQSRF 415
>gi|74205930|dbj|BAE23239.1| unnamed protein product [Mus musculus]
Length = 427
Score = 609 bits (1571), Expect = e-172, Method: Compositional matrix adjust.
Identities = 287/400 (71%), Positives = 338/400 (84%), Gaps = 1/400 (0%)
Query: 6 DNEYEDELLDYEE-EDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDS 64
+ + E+ELLDY+E E+ QAP + K YV IHSSGFRDFLLKPELLRAIVD
Sbjct: 3 EQDVENELLDYDEDEEPQAPQESTPAPPKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDC 62
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTR
Sbjct: 63 GFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVSVLVMCHTR 122
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDK 184
ELA+QI E+ERFS Y+P +KV+VF+GG++IK +D+LK CP +VVGTPGRILAL R +
Sbjct: 123 ELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEDVLKKNCPHVVVGTPGRILALVRSR 182
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 244
L+L+NV+HF+LDECDKMLE LDMRRDVQEIF++TPH+KQ MMFSATLSKEIRPVC+KFM
Sbjct: 183 SLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFM 242
Query: 245 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 304
QDPME++VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L
Sbjct: 243 QDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMAL 302
Query: 305 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 364
+LLVE NFP+I IH GM+QEERL+RY+ +K+ +RILVAT+L GRG+DIERVNIV NYD
Sbjct: 303 AQLLVEQNFPAIAIHRGMAQEERLSRYQQYKDFQRRILVATNLFGRGMDIERVNIVFNYD 362
Query: 365 MPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
MP+ +DTYLHRV RAGRFGTKGLA+TFVS +D+ ILN V
Sbjct: 363 MPEDSDTYLHRVARAGRFGTKGLAVTFVSDENDAKILNDV 402
>gi|344244550|gb|EGW00654.1| ATP-dependent RNA helicase DDX39 [Cricetulus griseus]
Length = 424
Score = 609 bits (1570), Expect = e-172, Method: Compositional matrix adjust.
Identities = 288/400 (72%), Positives = 337/400 (84%), Gaps = 1/400 (0%)
Query: 6 DNEYEDELLDYEE-EDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDS 64
+ + E+ELLDY+E E+ QAP + K YV IHSSGFRDFLLKPELLRAIVD
Sbjct: 3 EQDVENELLDYDEDEEPQAPQESTPAPPKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDC 62
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTR
Sbjct: 63 GFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPINGQVSVLVMCHTR 122
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDK 184
ELA+QI E+ERFS Y+P +KV+VF+GG++IK +D+LK CP +VVGTPGRILAL R +
Sbjct: 123 ELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEDVLKKNCPHVVVGTPGRILALVRSR 182
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 244
L+L+NV+HF+LDECDKMLE LDMRRDVQEIF++TPH+KQ MMFSATLSKEIRPVC+KFM
Sbjct: 183 SLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFM 242
Query: 245 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 304
QDPME++VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L
Sbjct: 243 QDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMAL 302
Query: 305 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 364
+LLVE NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYD
Sbjct: 303 AQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYD 362
Query: 365 MPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
MP+ +DTYLHRV RAGRFGTKGLA+TFVS +D+ ILN V
Sbjct: 363 MPEDSDTYLHRVARAGRFGTKGLAVTFVSDENDAKILNDV 402
>gi|55926219|ref|NP_446015.2| ATP-dependent RNA helicase DDX39A [Rattus norvegicus]
gi|61212312|sp|Q5U216.1|DX39A_RAT RecName: Full=ATP-dependent RNA helicase DDX39A; AltName: Full=DEAD
box protein 39; AltName: Full=Nuclear RNA helicase, DECD
variant of DEAD box family
gi|55562871|gb|AAH86328.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 [Rattus norvegicus]
gi|149037897|gb|EDL92257.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 39, isoform CRA_a [Rattus
norvegicus]
Length = 427
Score = 609 bits (1570), Expect = e-171, Method: Compositional matrix adjust.
Identities = 287/400 (71%), Positives = 337/400 (84%), Gaps = 1/400 (0%)
Query: 6 DNEYEDELLDYEE-EDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDS 64
+ + E+ELLDY+E E+ Q P + K YV IHSSGFRDFLLKPELLRAIVD
Sbjct: 3 EQDVENELLDYDEDEEPQVPQESTPAPPKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDC 62
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTR
Sbjct: 63 GFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPINGQVSVLVMCHTR 122
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDK 184
ELA+QI E+ERFS Y+P +KV+VF+GG++IK +D+LK CP +VVGTPGRILAL R +
Sbjct: 123 ELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEDVLKKNCPHVVVGTPGRILALVRSR 182
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 244
L+L+NV+HF+LDECDKMLE LDMRRDVQEIF++TPH+KQ MMFSATLSKEIRPVC+KFM
Sbjct: 183 SLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFM 242
Query: 245 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 304
QDPME++VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L
Sbjct: 243 QDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMAL 302
Query: 305 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 364
+LLVE NFP+I IH GM+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYD
Sbjct: 303 AQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYD 362
Query: 365 MPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
MP+ +DTYLHRV RAGRFGTKGLA+TFVS +D+ ILN V
Sbjct: 363 MPEDSDTYLHRVARAGRFGTKGLAVTFVSDENDAKILNDV 402
>gi|74216552|dbj|BAE37719.1| unnamed protein product [Mus musculus]
Length = 427
Score = 609 bits (1570), Expect = e-171, Method: Compositional matrix adjust.
Identities = 287/400 (71%), Positives = 338/400 (84%), Gaps = 1/400 (0%)
Query: 6 DNEYEDELLDYEE-EDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDS 64
+ + E+ELLDY+E E+ QAP + K YV IHSSGFRDFLL+PELLRAIVD
Sbjct: 3 EQDVENELLDYDEDEEPQAPQESTPAPPKKDVKGSYVSIHSSGFRDFLLEPELLRAIVDC 62
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTR
Sbjct: 63 GFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVSVLVMCHTR 122
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDK 184
ELA+QI E+ERFS Y+P +KV+VF+GG++IK +D+LK CP +VVGTPGRILAL R +
Sbjct: 123 ELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEDVLKKNCPHVVVGTPGRILALVRSR 182
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 244
L+L+NV+HF+LDECDKMLE LDMRRDVQEIF++TPH+KQ MMFSATLSKEIRPVC+KFM
Sbjct: 183 SLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFM 242
Query: 245 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 304
QDPME++VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L
Sbjct: 243 QDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMAL 302
Query: 305 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 364
+LLVE NFP+I IH GM+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYD
Sbjct: 303 AQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYD 362
Query: 365 MPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
MP+ +DTYLHRV RAGRFGTKGLA+TFVS +D+ ILN V
Sbjct: 363 MPEDSDTYLHRVARAGRFGTKGLAVTFVSDENDAKILNDV 402
>gi|3132829|gb|AAC16391.1| nuclear RNA helicase [Rattus norvegicus]
Length = 427
Score = 608 bits (1569), Expect = e-171, Method: Compositional matrix adjust.
Identities = 287/400 (71%), Positives = 337/400 (84%), Gaps = 1/400 (0%)
Query: 6 DNEYEDELLDYEE-EDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDS 64
+ + E+ELLDY+E E+ Q P + K YV IHSSGFRDFLLKPELLRAIVD
Sbjct: 3 EQDVENELLDYDEDEEPQVPQESTPAPPKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDC 62
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTR
Sbjct: 63 GFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPINGQVSVLVMCHTR 122
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDK 184
ELA+QI E+ERFS Y+P +KV+VF+GG++IK +D+LK CP +VVGTPGRILAL R +
Sbjct: 123 ELAFQISTEYERFSKYMPSVKVSVFFGGLSIKKDEDVLKKNCPHVVVGTPGRILALVRSR 182
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 244
L+L+NV+HF+LDECDKMLE LDMRRDVQEIF++TPH+KQ MMFSATLSKEIRPVC+KFM
Sbjct: 183 SLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFM 242
Query: 245 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 304
QDPME++VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L
Sbjct: 243 QDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMAL 302
Query: 305 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 364
+LLVE NFP+I IH GM+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYD
Sbjct: 303 AQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYD 362
Query: 365 MPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
MP+ +DTYLHRV RAGRFGTKGLA+TFVS +D+ ILN V
Sbjct: 363 MPEDSDTYLHRVARAGRFGTKGLAVTFVSDENDAKILNDV 402
>gi|148231835|ref|NP_001079623.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A [Xenopus laevis]
gi|28278799|gb|AAH45239.1| MGC53693 protein [Xenopus laevis]
gi|31580806|gb|AAP51031.1| DECD-box RNA helicase [Xenopus laevis]
gi|76779487|gb|AAI06295.1| MGC53693 protein [Xenopus laevis]
Length = 427
Score = 608 bits (1568), Expect = e-171, Method: Compositional matrix adjust.
Identities = 289/400 (72%), Positives = 335/400 (83%), Gaps = 1/400 (0%)
Query: 6 DNEYEDELLDYEEED-AQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDS 64
+ + E+ELLDYEE+D QAP A + K YV IHSSGFRDFLLKPELLR+IVD
Sbjct: 3 EQDVENELLDYEEDDEPQAPAETAVPIARKEVKGSYVSIHSSGFRDFLLKPELLRSIVDC 62
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFEHPSEVQHECIPQAILGMD++CQAKSGMGKTAVFVL+TLQQ E GQV+ LV+CHTR
Sbjct: 63 GFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEAVEGQVSVLVMCHTR 122
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDK 184
ELA+QI E+ERFS Y+P +KVAVF+GG++IK +D ++ CP IVVGTPGRILAL R K
Sbjct: 123 ELAFQISKEYERFSKYMPTVKVAVFFGGLSIKKDEDTIRKSCPHIVVGTPGRILALVRSK 182
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 244
L+LKNV+HF+LDECDKMLE LDMRRDVQEIF++TPH+KQ MMFSATLSKEIRPVC+KFM
Sbjct: 183 ILNLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFM 242
Query: 245 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 304
QDPME++VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L
Sbjct: 243 QDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMAL 302
Query: 305 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 364
+LL+E NFP+I IH MSQEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYD
Sbjct: 303 AQLLIEQNFPAIAIHRNMSQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYD 362
Query: 365 MPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
MP+ +DTYLHRV RAGRFGTKGLAITFVS D+ ILN V
Sbjct: 363 MPEDSDTYLHRVARAGRFGTKGLAITFVSDEEDAKILNDV 402
>gi|61217546|sp|Q5ZHZ0.1|DX39B_CHICK RecName: Full=Spliceosome RNA helicase DDX39B; AltName: Full=56 kDa
U2AF65-associated protein; AltName: Full=DEAD box
protein UAP56
gi|53136648|emb|CAG32653.1| hypothetical protein RCJMB04_32b9 [Gallus gallus]
gi|255661416|gb|ACU25864.1| HLA-B associated protein 1 [Meleagris gallopavo]
Length = 428
Score = 608 bits (1568), Expect = e-171, Method: Compositional matrix adjust.
Identities = 294/407 (72%), Positives = 339/407 (83%), Gaps = 14/407 (3%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPEL 57
+N+ ++ELLDYEE D V A G+ + K YV IHSSGFRDFLLKPEL
Sbjct: 3 ENDVDNELLDYEE------DEVENAAGGDGSEAPPKKDVKGSYVSIHSSGFRDFLLKPEL 56
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA 117
LRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+
Sbjct: 57 LRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSV 116
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRI 177
LV+CHTRELA+QI E+ERFS Y+P +KVAVF+GG+ +K +++LK CP IVVGTPGRI
Sbjct: 117 LVMCHTRELAFQISKEYERFSKYMPSVKVAVFFGGLAVKKDEEVLKKNCPHIVVGTPGRI 176
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
LALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIR
Sbjct: 177 LALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR 236
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 297
PVC+KFMQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKS
Sbjct: 237 PVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKS 296
Query: 298 VSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERV 357
V R L +LLVE NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERV
Sbjct: 297 VQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERV 356
Query: 358 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
NI NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN V
Sbjct: 357 NIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDV 403
>gi|344307250|ref|XP_003422295.1| PREDICTED: spliceosome RNA helicase DDX39B-like [Loxodonta
africana]
Length = 440
Score = 608 bits (1568), Expect = e-171, Method: Compositional matrix adjust.
Identities = 295/407 (72%), Positives = 341/407 (83%), Gaps = 14/407 (3%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPEL 57
+N+ ++ELLDYE+ D V T A G+ A K YV IHSSGFRDFLLKPEL
Sbjct: 3 ENDVDNELLDYED------DEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPEL 56
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA 117
LRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+
Sbjct: 57 LRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSV 116
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRI 177
LV+CHTRELA+QI E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRI
Sbjct: 117 LVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRI 176
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
LALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIR
Sbjct: 177 LALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR 236
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 297
PVC+KFMQD MEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKS
Sbjct: 237 PVCRKFMQDQMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKS 296
Query: 298 VSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERV 357
V R L +LLVE NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERV
Sbjct: 297 VQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERV 356
Query: 358 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
NI NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN V
Sbjct: 357 NIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDV 403
>gi|384493944|gb|EIE84435.1| ATP-dependent RNA helicase uap56 [Rhizopus delemar RA 99-880]
Length = 435
Score = 608 bits (1567), Expect = e-171, Method: Compositional matrix adjust.
Identities = 298/414 (71%), Positives = 349/414 (84%), Gaps = 16/414 (3%)
Query: 8 EYEDELLDYEEEDAQAPDS--VATKAN------GEAAKKG-YVGIHSSGFRDFLLKPELL 58
++ D+L+DYEEED Q D V+TK + KKG YVGIHS+GFRDFLLKPELL
Sbjct: 5 DHADDLIDYEEEDEQTLDQKPVSTKVEEIREEEDKKDKKGSYVGIHSTGFRDFLLKPELL 64
Query: 59 RAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTAL 118
R+IVD GFEHPSEVQ ECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP G V+ +
Sbjct: 65 RSIVDCGFEHPSEVQQECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPIDGDVSVV 124
Query: 119 VLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGV----NIKIHKDLLKNECPQIVVGTP 174
VLCHTRELA+QI +E+ RFS YLPDI+ VFYGGV +I+I KD KN+CP I+VGTP
Sbjct: 125 VLCHTRELAFQIKNEYARFSKYLPDIRTEVFYGGVPITKDIEILKD--KNKCPHILVGTP 182
Query: 175 GRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSK 234
GR+LAL R++ +SL ++HF+LDECDKMLE LDMRRDVQ+IF+ TPH KQVMMFSATL+K
Sbjct: 183 GRVLALVRERHISLSTIKHFVLDECDKMLEQLDMRRDVQDIFRSTPHHKQVMMFSATLAK 242
Query: 235 EIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIF 294
E+RPVCK+FMQ+P+EIYVDDEAKLTLHGL Q YIKL E EKNRKLNDLLD+L+FNQV IF
Sbjct: 243 EMRPVCKRFMQNPLEIYVDDEAKLTLHGLQQFYIKLEEKEKNRKLNDLLDSLEFNQVCIF 302
Query: 295 VKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDI 354
V+SVSRA ELN++L +CNFPSICIHS M+Q+ER+ RYK FKE KRI+VATD+ GRGIDI
Sbjct: 303 VRSVSRANELNRILSDCNFPSICIHSQMTQDERIKRYKSFKEFEKRIMVATDIFGRGIDI 362
Query: 355 ERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV-SKF 407
ERVNIVINYDMPD AD+YLHRVGRAGRFGTKGL ITFVS +D+++LN V S+F
Sbjct: 363 ERVNIVINYDMPDGADSYLHRVGRAGRFGTKGLGITFVSDENDTEVLNDVQSRF 416
>gi|410307166|gb|JAA32183.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B [Pan troglodytes]
gi|410307168|gb|JAA32184.1| HLA-B associated transcript 1 [Pan troglodytes]
Length = 428
Score = 608 bits (1567), Expect = e-171, Method: Compositional matrix adjust.
Identities = 295/407 (72%), Positives = 341/407 (83%), Gaps = 14/407 (3%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPEL 57
+N+ ++ELLDYE+ D V T A G+ A K YV IHSSGFRDFLLKPEL
Sbjct: 3 ENDVDNELLDYED------DEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPEL 56
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA 117
LRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+
Sbjct: 57 LRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSV 116
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRI 177
LV+CHTRELA+QI E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRI
Sbjct: 117 LVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRI 176
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
LALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIR
Sbjct: 177 LALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR 236
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 297
PVC+KFMQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKS
Sbjct: 237 PVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKS 296
Query: 298 VSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERV 357
V R L +LLVE NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERV
Sbjct: 297 VQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERV 356
Query: 358 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
NI NYDMP+ +DTYL RV RAGRFGTKGLAITFVS +D+ ILN V
Sbjct: 357 NIAFNYDMPEDSDTYLPRVARAGRFGTKGLAITFVSDENDAKILNDV 403
>gi|19773876|gb|AAL98920.1| Bat1 [Rattus norvegicus]
Length = 428
Score = 608 bits (1567), Expect = e-171, Method: Compositional matrix adjust.
Identities = 293/401 (73%), Positives = 343/401 (85%), Gaps = 2/401 (0%)
Query: 6 DNEYEDELLDYEEEDAQ-APDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVD 63
+N+ ++ELLDYE+++ + A + T+A + KG YV IHSSGFRDFLLKPELLRAIVD
Sbjct: 3 ENDVDNELLDYEDDEVETAAGADGTEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVD 62
Query: 64 SGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHT 123
GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHT
Sbjct: 63 CGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHT 122
Query: 124 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARD 183
RELA+QI E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRILALAR+
Sbjct: 123 RELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARN 182
Query: 184 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF 243
K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEI PVC+KF
Sbjct: 183 KSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIPPVCRKF 242
Query: 244 MQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAE 303
MQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L FNQVVIFVKSV R
Sbjct: 243 MQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLQFNQVVIFVKSVQRCIA 302
Query: 304 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 363
L +LLVE NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNI NY
Sbjct: 303 LAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNY 362
Query: 364 DMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
DMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN V
Sbjct: 363 DMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDV 403
>gi|395828827|ref|XP_003787565.1| PREDICTED: spliceosome RNA helicase DDX39B-like isoform 1 [Otolemur
garnettii]
Length = 428
Score = 608 bits (1567), Expect = e-171, Method: Compositional matrix adjust.
Identities = 294/407 (72%), Positives = 341/407 (83%), Gaps = 14/407 (3%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPEL 57
+N+ ++ELLDYEE D V T A G+ A K YV IHSSGFRDFLLKPEL
Sbjct: 3 ENDVDNELLDYEE------DEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPEL 56
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA 117
LRAIVD GFEHPSEVQHECIPQ+ILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+
Sbjct: 57 LRAIVDCGFEHPSEVQHECIPQSILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSV 116
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRI 177
LV+CHT+ELA+QI E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRI
Sbjct: 117 LVMCHTQELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRI 176
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
LALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIR
Sbjct: 177 LALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR 236
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 297
PVC+KFMQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKS
Sbjct: 237 PVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKS 296
Query: 298 VSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERV 357
V R L +LLVE NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L G G+DIERV
Sbjct: 297 VQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGHGMDIERV 356
Query: 358 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
NI NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN V
Sbjct: 357 NIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDV 403
>gi|74214685|dbj|BAE31182.1| unnamed protein product [Mus musculus]
Length = 427
Score = 607 bits (1566), Expect = e-171, Method: Compositional matrix adjust.
Identities = 287/400 (71%), Positives = 337/400 (84%), Gaps = 1/400 (0%)
Query: 6 DNEYEDELLDYEE-EDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDS 64
+ + E+ELLDY+E E+ QAP + K YV IHSSGFRDFLLKPELLRAIVD
Sbjct: 3 EQDVENELLDYDEDEEPQAPQESTPAPPKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDC 62
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTR
Sbjct: 63 GFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVSVLVMCHTR 122
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDK 184
ELA+QI E+ERFS Y+P +KV+VF+GG++IK +D+LK CP +VVGTPGRILAL R +
Sbjct: 123 ELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEDVLKKNCPHVVVGTPGRILALVRSR 182
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 244
L+L+NV+HF+LDECDKMLE LDMRRDVQEIF++TPH+KQ MMFSATLSKEIRPVC+KFM
Sbjct: 183 SLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFM 242
Query: 245 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 304
QDPME++VD E KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L
Sbjct: 243 QDPMEVFVDHETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMAL 302
Query: 305 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 364
+LLVE NFP+I IH GM+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYD
Sbjct: 303 AQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYD 362
Query: 365 MPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
MP+ +DTYLHRV RAGRFGTKGLA+TFVS +D+ ILN V
Sbjct: 363 MPEDSDTYLHRVARAGRFGTKGLAVTFVSDENDAKILNDV 402
>gi|219130818|ref|XP_002185552.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217402960|gb|EEC42917.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 428
Score = 607 bits (1566), Expect = e-171, Method: Compositional matrix adjust.
Identities = 287/389 (73%), Positives = 336/389 (86%), Gaps = 4/389 (1%)
Query: 23 APDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAI 81
A D+ A +G+ +KKG YVGIH+SGF+DFLLKPELLRAIVD+GFEHPSEVQHE IPQA+
Sbjct: 21 AKDAAAVGGDGKESKKGHYVGIHASGFKDFLLKPELLRAIVDAGFEHPSEVQHESIPQAV 80
Query: 82 LGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQ--VTALVLCHTRELAYQICHEFERFST 139
LG D++CQAKSGMGKTAVFVL+TL Q P+ V LVLCHTRELA+QI HE+ERFS
Sbjct: 81 LGGDIVCQAKSGMGKTAVFVLATLHQLNPSAESEDVQVLVLCHTRELAFQIAHEYERFSK 140
Query: 140 YLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDEC 199
YLP IK AVFYGGVN+ ++D+LK E P IVVGTPGRIL LARDKDL L +++HF+LDEC
Sbjct: 141 YLPSIKTAVFYGGVNVTQNRDILKKEHPHIVVGTPGRILKLARDKDLKLSSLKHFVLDEC 200
Query: 200 DKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLT 259
D++LESLDMRRDVQEIF+MTPH+KQV++FSATLSKEIRPVCKKF QDPMEIYVDDE KLT
Sbjct: 201 DRVLESLDMRRDVQEIFRMTPHEKQVLLFSATLSKEIRPVCKKFCQDPMEIYVDDETKLT 260
Query: 260 LHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIH 319
LHGL +Y KL+E EKN+KLNDLLDAL+FNQVVIFV V+RA ELN+LL ECNFPSICIH
Sbjct: 261 LHGLQLYYAKLAEAEKNKKLNDLLDALEFNQVVIFVSKVARAKELNRLLTECNFPSICIH 320
Query: 320 SGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRA 379
+GM QEER+++YK FK+ N RILVATDL GRGIDIERVN+VINYD PD +D +LHRVGRA
Sbjct: 321 AGMRQEERISKYKSFKDFNARILVATDLFGRGIDIERVNVVINYDFPDDSDQFLHRVGRA 380
Query: 380 GRFGTKGLAITFVSSASDSDILNQV-SKF 407
GRFGTKG+AI+F+SS +D IL+Q+ S+F
Sbjct: 381 GRFGTKGIAISFISSEADQTILSQIQSRF 409
>gi|147905268|ref|NP_001080733.1| nuclear RNA helicase [Xenopus laevis]
gi|28280049|gb|AAH45125.1| Ddx39-prov protein [Xenopus laevis]
Length = 427
Score = 607 bits (1565), Expect = e-171, Method: Compositional matrix adjust.
Identities = 288/400 (72%), Positives = 335/400 (83%), Gaps = 1/400 (0%)
Query: 6 DNEYEDELLDYEEED-AQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDS 64
+ + E+ELLDYEE+D QAP A + K YV IHSSGFRDFLLKPELLR+IVD
Sbjct: 3 EQDVENELLDYEEDDEPQAPAETAAPIARKEVKGSYVSIHSSGFRDFLLKPELLRSIVDC 62
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFEHPSEVQHECIPQAILGMD++CQAKSGMGKTAVFVL+TLQQ E GQV+ LV+CHTR
Sbjct: 63 GFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEAVEGQVSVLVMCHTR 122
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDK 184
ELA+QI E+ERFS Y+P ++VAVF+GG++IK +D ++ CP IVVGTPGRILAL R K
Sbjct: 123 ELAFQISKEYERFSKYMPTVEVAVFFGGLSIKKDEDTIRKSCPHIVVGTPGRILALVRSK 182
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 244
L+LKNV+HF+LDECDKMLE LDMRRDVQEIF++TPH+KQ MMFSATLSKEIRPVC+KFM
Sbjct: 183 ILNLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFM 242
Query: 245 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 304
QDPME++VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L
Sbjct: 243 QDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMAL 302
Query: 305 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 364
+LL+E NFP+I IH MSQEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYD
Sbjct: 303 AQLLIEQNFPAIAIHRNMSQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYD 362
Query: 365 MPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
MP+ +DTYLHRV RAGRFGTKGLAITFVS D+ ILN V
Sbjct: 363 MPEDSDTYLHRVARAGRFGTKGLAITFVSDEEDAKILNDV 402
>gi|115688648|ref|XP_001178866.1| PREDICTED: spliceosome RNA helicase DDX39B-like [Strongylocentrotus
purpuratus]
Length = 429
Score = 607 bits (1564), Expect = e-171, Method: Compositional matrix adjust.
Identities = 294/413 (71%), Positives = 334/413 (80%), Gaps = 3/413 (0%)
Query: 6 DNEYEDELLDYEEEDAQAPDSV---ATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIV 62
++E E ELLDYE+E+AQ A K E KGYV IHSSGFRDFLLKPELLRAIV
Sbjct: 4 NDENEQELLDYEDEEAQETADAGGDAVKQQKETKAKGYVSIHSSGFRDFLLKPELLRAIV 63
Query: 63 DSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCH 122
D GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ +P GQV+ LV+CH
Sbjct: 64 DCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLDPVDGQVSVLVMCH 123
Query: 123 TRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALAR 182
TRELA+QI E+ERFS Y+P +KV VF+GG++IK + +K CP IVVGTPGR LAL R
Sbjct: 124 TRELAFQIAKEYERFSKYMPTVKVGVFFGGLSIKKDEQTIKTNCPHIVVGTPGRTLALGR 183
Query: 183 DKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKK 242
K L+LK+V+HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKE+RPVCKK
Sbjct: 184 QKILNLKHVKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEVRPVCKK 243
Query: 243 FMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAA 302
FMQDPME+YVDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R
Sbjct: 244 FMQDPMEVYVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCI 303
Query: 303 ELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVIN 362
L +LLVE NFP+I IH M Q+ERL RY+ FK KRILVAT+L GRG+DIERVNIV N
Sbjct: 304 ALCQLLVEQNFPAIGIHRAMQQDERLARYQAFKTFQKRILVATNLFGRGMDIERVNIVFN 363
Query: 363 YDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKFMFLLIGSF 415
YDMP+ +DTYLHRV RAGRFGTKGLA+TFVS D+ LN V + IG
Sbjct: 364 YDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDEEDAKTLNDVQDRFEVNIGEL 416
>gi|213514512|ref|NP_001133398.1| Spliceosome RNA helicase BAT1 [Salmo salar]
gi|209153419|gb|ACI33160.1| Spliceosome RNA helicase BAT1 [Salmo salar]
Length = 428
Score = 605 bits (1561), Expect = e-170, Method: Compositional matrix adjust.
Identities = 292/403 (72%), Positives = 339/403 (84%), Gaps = 6/403 (1%)
Query: 6 DNEYEDELLDYEEEDA----QAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAI 61
+ + E+ELLDYEE+D D ++ K E K YV IHSSGFRDFLLKPELLRAI
Sbjct: 3 EQDVENELLDYEEDDVVGDLSGGDILSIKK--ERVKGSYVSIHSSGFRDFLLKPELLRAI 60
Query: 62 VDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLC 121
VD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+C
Sbjct: 61 VDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMC 120
Query: 122 HTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALA 181
HTRELA+QI E+ERFS Y+P IKVAVF+GG++IK +++LK ECP +VVGTPGRILAL
Sbjct: 121 HTRELAFQISKEYERFSKYMPTIKVAVFFGGLSIKKDEEVLKKECPHVVVGTPGRILALI 180
Query: 182 RDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCK 241
R+K L+L++++HFILDECDKMLE LDMRRDVQEIF++TPH+KQVMMFSATLSKEIRPVC+
Sbjct: 181 RNKTLNLRHIKHFILDECDKMLEQLDMRRDVQEIFRLTPHEKQVMMFSATLSKEIRPVCR 240
Query: 242 KFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRA 301
KFMQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R
Sbjct: 241 KFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRC 300
Query: 302 AELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVI 361
L +LLVE NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNI
Sbjct: 301 VALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAF 360
Query: 362 NYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ LN V
Sbjct: 361 NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDETDARTLNDV 403
>gi|509403|emb|CAA84355.1| BAT1 [Sus scrofa]
Length = 427
Score = 605 bits (1561), Expect = e-170, Method: Compositional matrix adjust.
Identities = 289/401 (72%), Positives = 339/401 (84%), Gaps = 1/401 (0%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDS 64
+N+ ++ELLDYE+++ + + KG YV IHSSGFRDFLLKPELLRAIVD
Sbjct: 3 ENDVDNELLDYEDDEVETAAGGDGAEAAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDC 62
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTR
Sbjct: 63 GFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTR 122
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDK 184
ELA+QI E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRILALAR+K
Sbjct: 123 ELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNK 182
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 244
L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKE+RPVC+KFM
Sbjct: 183 SLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEVRPVCRKFM 242
Query: 245 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 304
QDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L
Sbjct: 243 QDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIAL 302
Query: 305 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 364
+LLVE NFP+I IH GM QEERL+RY+ FK+ + ILVAT+L GRG+DIERVNI NYD
Sbjct: 303 AQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRGILVATNLFGRGMDIERVNIAFNYD 362
Query: 365 MPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVS 405
MP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN V
Sbjct: 363 MPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQ 403
>gi|384500538|gb|EIE91029.1| ATP-dependent RNA helicase uap56 [Rhizopus delemar RA 99-880]
Length = 433
Score = 605 bits (1561), Expect = e-170, Method: Compositional matrix adjust.
Identities = 295/413 (71%), Positives = 348/413 (84%), Gaps = 15/413 (3%)
Query: 8 EYEDELLDYEEEDAQ-------APDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLR 59
++ D+L+DYEEED Q AP + + + + KKG YVGIHS+GFRDFLLKPELLR
Sbjct: 4 DHADDLIDYEEEDEQTLQQETTAPQTDSIEEEEKKDKKGSYVGIHSTGFRDFLLKPELLR 63
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
+IVD GFEHPSEVQ ECIPQ+ILGMDV+CQAKSGMGKTAVFVL+TLQQ EP G+V+ ++
Sbjct: 64 SIVDCGFEHPSEVQQECIPQSILGMDVLCQAKSGMGKTAVFVLATLQQLEPINGEVSVII 123
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGV----NIKIHKDLLKNECPQIVVGTPG 175
LCHTRELA+QI +E+ RFS YLPDI+ VFYGGV +++ KD KN+CP I+VGTPG
Sbjct: 124 LCHTRELAFQIKNEYARFSKYLPDIRTEVFYGGVPMTKDVETLKD--KNKCPHILVGTPG 181
Query: 176 RILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKE 235
R+LAL RDK L L NV+HF+LDECDKMLE LDMRRDVQ+IF+ TPH KQVMMF+ATL+K+
Sbjct: 182 RVLALIRDKHLKLSNVKHFVLDECDKMLEQLDMRRDVQDIFRATPHHKQVMMFTATLAKD 241
Query: 236 IRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFV 295
+RPVCKKFMQ+P+EIYVDDEAKLTLHGL Q YIKL E EKNRKLNDLLD+L+FNQV IFV
Sbjct: 242 MRPVCKKFMQNPLEIYVDDEAKLTLHGLQQFYIKLEEKEKNRKLNDLLDSLEFNQVCIFV 301
Query: 296 KSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIE 355
+SVSRA ELN++L +CNFPSICIHS M+Q+ER+ RYK FKE KRI+VATD+ GRGIDIE
Sbjct: 302 RSVSRANELNRILTDCNFPSICIHSQMTQDERIKRYKSFKEFEKRIMVATDIFGRGIDIE 361
Query: 356 RVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV-SKF 407
RVNIVINYDMPD AD+YLHRVGRAGRFGTKGL ITFVS +D+ +LN V S+F
Sbjct: 362 RVNIVINYDMPDGADSYLHRVGRAGRFGTKGLGITFVSDENDTQVLNDVQSRF 414
>gi|225710812|gb|ACO11252.1| ATP-dependent RNA helicase DDX39 [Caligus rogercresseyi]
Length = 426
Score = 604 bits (1557), Expect = e-170, Method: Compositional matrix adjust.
Identities = 292/402 (72%), Positives = 333/402 (82%), Gaps = 5/402 (1%)
Query: 7 NEYEDELLDYEEEDAQAPDSVATKANGEAAKK----GYVGIHSSGFRDFLLKPELLRAIV 62
E E +LLDYEEED P +V T++NG KK YV IHSSGFRDFLLKPE+LRAI
Sbjct: 2 TEVEADLLDYEEEDTPTP-AVTTESNGSEHKKEVKGTYVSIHSSGFRDFLLKPEILRAIG 60
Query: 63 DSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCH 122
D GFEHPSEVQHECIPQA+LGMD++ QAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CH
Sbjct: 61 DCGFEHPSEVQHECIPQAVLGMDILSQAKSGMGKTAVFVLATLQQMEPVDGQVSVLVMCH 120
Query: 123 TRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALAR 182
TRELA+QI E+ERFS YLP KV VF+GG+ I + +LK+ CP IVVGTPGRILAL R
Sbjct: 121 TRELAFQISKEYERFSKYLPGAKVGVFFGGLAISKDEQVLKSNCPHIVVGTPGRILALVR 180
Query: 183 DKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKK 242
K L+LKNV+HFILDEC KMLE LDMRRDVQEIF+ TPH+KQVMMFSATLSK++RPVCKK
Sbjct: 181 SKKLNLKNVKHFILDECGKMLEQLDMRRDVQEIFRSTPHEKQVMMFSATLSKDVRPVCKK 240
Query: 243 FMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAA 302
FMQDPME+YVDDEAKLTLHGL QHY+KL + EKNRKL +LLD L+FNQVVIFVKSV R
Sbjct: 241 FMQDPMEVYVDDEAKLTLHGLQQHYVKLKDTEKNRKLFELLDVLEFNQVVIFVKSVQRCV 300
Query: 303 ELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVIN 362
L +LL+E NF +I IH GM+QEERL+RY+ FK+ KRILVAT+L GRG+DIERVNIV N
Sbjct: 301 ALAQLLIEQNFTAIAIHRGMNQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFN 360
Query: 363 YDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
YDMP+ DTYLHRV RAGRFGTKGLAITFVS SD+ LN+V
Sbjct: 361 YDMPEDTDTYLHRVARAGRFGTKGLAITFVSDESDAKTLNEV 402
>gi|397594911|gb|EJK56348.1| hypothetical protein THAOC_23784 [Thalassiosira oceanica]
Length = 412
Score = 603 bits (1556), Expect = e-170, Method: Compositional matrix adjust.
Identities = 281/374 (75%), Positives = 328/374 (87%), Gaps = 6/374 (1%)
Query: 40 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 99
YVGIH+SGF+DF+LKPE LRA+VD GFEHPSEVQHECIPQA+LGMD++CQAKSGMGKTAV
Sbjct: 20 YVGIHASGFKDFILKPECLRAVVDCGFEHPSEVQHECIPQAVLGMDIVCQAKSGMGKTAV 79
Query: 100 FVLSTLQQTEPNP-----GQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVN 154
FVL+TL Q +PN QV+ LVLCHTRELA+QI HE+ERFS YLP++K AVFYGGV
Sbjct: 80 FVLATLHQLDPNAFPAGENQVSVLVLCHTRELAFQIAHEYERFSKYLPEVKTAVFYGGVA 139
Query: 155 IKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQE 214
IK ++D+LKN+CP IVVGTPGRIL LAR+K L L +++HF+LDECD+MLE+LDMRRDVQE
Sbjct: 140 IKTNRDVLKNDCPHIVVGTPGRILGLAREKTLKLDHIKHFVLDECDRMLEALDMRRDVQE 199
Query: 215 IFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE 274
IF+MTPH+KQVMMFSATL KEIRPVCKKF QDPMEIYVDD+ KLTLHGL +Y+KL+E E
Sbjct: 200 IFRMTPHEKQVMMFSATLGKEIRPVCKKFCQDPMEIYVDDDTKLTLHGLQLYYVKLAEAE 259
Query: 275 KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGF 334
KNRKLNDLLDAL+FNQVVIFV V+RA ELN+LL ECNFPSICIH+G QEER+ +YK F
Sbjct: 260 KNRKLNDLLDALEFNQVVIFVSKVARANELNRLLTECNFPSICIHAGQKQEERIAKYKSF 319
Query: 335 KEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSS 394
KE N RILV+TDL GRGIDIERVN+VINYD PD +D +LHRVGRAGRFGTKGLAI+F+SS
Sbjct: 320 KEFNARILVSTDLFGRGIDIERVNVVINYDFPDDSDQFLHRVGRAGRFGTKGLAISFISS 379
Query: 395 ASDSDILNQV-SKF 407
D +IL++V S+F
Sbjct: 380 EPDQEILDKVQSRF 393
>gi|355703230|gb|EHH29721.1| ATP-dependent RNA helicase DDX39 [Macaca mulatta]
Length = 477
Score = 603 bits (1555), Expect = e-170, Method: Compositional matrix adjust.
Identities = 287/400 (71%), Positives = 339/400 (84%), Gaps = 1/400 (0%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDS 64
+ + E++LLDY+EE+ +T A + KG YV IHSSGFRDFLLKPELLRAIVD
Sbjct: 53 EQDVENDLLDYDEEEEPQAPQESTPAPPKKDIKGSYVSIHSSGFRDFLLKPELLRAIVDC 112
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQVT LV+CHTR
Sbjct: 113 GFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTR 172
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDK 184
ELA+QI E+ERFS Y+P +KV+VF+GG++IK +++LK CP +VVGTPGRILAL R++
Sbjct: 173 ELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNR 232
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 244
SLKNV+HF+LDECDKMLE LDMRRDVQEIF++TPH+KQ MMFSATLSK+IRPVC+KFM
Sbjct: 233 SFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCRKFM 292
Query: 245 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 304
QDPME++VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQV+IFVKSV R L
Sbjct: 293 QDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVIIFVKSVQRCMAL 352
Query: 305 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 364
+LLVE NFP+I IH GM+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYD
Sbjct: 353 AQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYD 412
Query: 365 MPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
MP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN V
Sbjct: 413 MPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDV 452
>gi|440898761|gb|ELR50186.1| Spliceosome RNA helicase BAT1 [Bos grunniens mutus]
Length = 439
Score = 602 bits (1553), Expect = e-170, Method: Compositional matrix adjust.
Identities = 296/421 (70%), Positives = 341/421 (80%), Gaps = 28/421 (6%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPEL 57
+N+ ++ELLDYE+ D V T A G+ A K YV IHSSGFRDFLLKPEL
Sbjct: 3 ENDVDNELLDYED------DEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPEL 56
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQV-- 115
LRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV
Sbjct: 57 LRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVHL 116
Query: 116 ------------TALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK 163
+ LV+CHTRELA+QI E+ERFS Y+P +KVAVF+GG++IK +++LK
Sbjct: 117 QRVLGKASWLVVSVLVMCHTRELAFQISKEYERFSKYMPSVKVAVFFGGLSIKKDEEVLK 176
Query: 164 NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDK 223
CP IVVGTPGRILALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+K
Sbjct: 177 KNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEK 236
Query: 224 QVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLL 283
QVMMFSATLSKEIRPVC+KFMQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLL
Sbjct: 237 QVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLL 296
Query: 284 DALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILV 343
D L+FNQVVIFVKSV R L +LLVE NFP+I IH GM QEERL+RY+ FK+ +RILV
Sbjct: 297 DVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILV 356
Query: 344 ATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQ 403
AT+L GRG+DIERVNI NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN
Sbjct: 357 ATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILND 416
Query: 404 V 404
V
Sbjct: 417 V 417
>gi|114306812|dbj|BAF31287.1| BAT1 protein [Homo sapiens]
Length = 443
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 296/422 (70%), Positives = 342/422 (81%), Gaps = 29/422 (6%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPEL 57
+N+ ++ELLDYE+ D V T A G+ A K YV IHSSGFRDFLLKPEL
Sbjct: 3 ENDVDNELLDYED------DEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPEL 56
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQV-- 115
LRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV
Sbjct: 57 LRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVYL 116
Query: 116 -------------TALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL 162
+ LV+CHTRELA+QI E+ERFS Y+P++KVAVF+GG++IK +++L
Sbjct: 117 GRVLGRGFWLGLVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVL 176
Query: 163 KNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHD 222
K CP IVVGTPGRILALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+
Sbjct: 177 KKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHE 236
Query: 223 KQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDL 282
KQVMMFSATLSKEIRPVC+KFMQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DL
Sbjct: 237 KQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDL 296
Query: 283 LDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRIL 342
LD L+FNQVVIFVKSV R L +LLVE NFP+I IH GM QEERL+RY+ FK+ +RIL
Sbjct: 297 LDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRIL 356
Query: 343 VATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILN 402
VAT+L GRG+DIERVNI NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN
Sbjct: 357 VATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILN 416
Query: 403 QV 404
V
Sbjct: 417 DV 418
>gi|308811262|ref|XP_003082939.1| putative HLA-B associated transcript 1 (ISS) [Ostreococcus tauri]
gi|116054817|emb|CAL56894.1| putative HLA-B associated transcript 1 (ISS) [Ostreococcus tauri]
Length = 543
Score = 602 bits (1551), Expect = e-169, Method: Compositional matrix adjust.
Identities = 290/384 (75%), Positives = 324/384 (84%), Gaps = 1/384 (0%)
Query: 22 QAP-DSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQA 80
AP D+V A+G AKKGYVGIHS+GFRDFLLKPELLRAIVD GFEHPSEVQHECIPQA
Sbjct: 34 NAPGDAVDDTADGTTAKKGYVGIHSTGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQA 93
Query: 81 ILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTY 140
ILGMDV+CQAKSGMGKTAVFV++ LQQ EP G+V A++LC+TRELAYQI HEFERFST+
Sbjct: 94 ILGMDVLCQAKSGMGKTAVFVITVLQQLEPTHGEVGAVILCNTRELAYQISHEFERFSTF 153
Query: 141 LPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECD 200
L D+ AV +GG+ I ++ LK P IVVGTPGR+ ALA D L+LK HF+LDECD
Sbjct: 154 LGDVTTAVVFGGIPINQQREQLKLNPPNIVVGTPGRLKALANDGTLNLKKCAHFVLDECD 213
Query: 201 KMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTL 260
KMLE LDMR DVQEIFK TPHDKQVMMF+ATLSKE+R +CKKFM DPMEI+VDDE KLTL
Sbjct: 214 KMLEELDMRSDVQEIFKATPHDKQVMMFTATLSKELRALCKKFMNDPMEIFVDDETKLTL 273
Query: 261 HGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHS 320
HGLVQHY+KL E EKNRKLNDLLD+L FNQVVIFV SVSR L++LL ECNFPSI IH
Sbjct: 274 HGLVQHYVKLEEAEKNRKLNDLLDSLMFNQVVIFVSSVSRCKALDRLLRECNFPSIGIHG 333
Query: 321 GMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAG 380
M QEERL YK FK+G+KRILVATDLV RGIDIERVNIVINYDMP SADTYLHRVGRAG
Sbjct: 334 DMKQEERLACYKSFKDGDKRILVATDLVARGIDIERVNIVINYDMPSSADTYLHRVGRAG 393
Query: 381 RFGTKGLAITFVSSASDSDILNQV 404
RFGTKGLA+TFV+S+ D+D+L V
Sbjct: 394 RFGTKGLAVTFVASSEDTDVLASV 417
>gi|402904532|ref|XP_003915097.1| PREDICTED: ATP-dependent RNA helicase DDX39A [Papio anubis]
Length = 555
Score = 601 bits (1550), Expect = e-169, Method: Compositional matrix adjust.
Identities = 287/400 (71%), Positives = 339/400 (84%), Gaps = 1/400 (0%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDS 64
+ + E++LLDY+EE+ +T A + KG YV IHSSGFRDFLLKPELLRAIVD
Sbjct: 131 EQDVENDLLDYDEEEEPQAPQESTPAPPKKDIKGSYVSIHSSGFRDFLLKPELLRAIVDC 190
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQVT LV+CHTR
Sbjct: 191 GFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTR 250
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDK 184
ELA+QI E+ERFS Y+P +KV+VF+GG++IK +++LK CP +VVGTPGRILAL R++
Sbjct: 251 ELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNR 310
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 244
SLKNV+HF+LDECDKMLE LDMRRDVQEIF++TPH+KQ MMFSATLSK+IRPVC+KFM
Sbjct: 311 SFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCRKFM 370
Query: 245 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 304
QDPME++VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQV+IFVKSV R L
Sbjct: 371 QDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVIIFVKSVQRCMAL 430
Query: 305 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 364
+LLVE NFP+I IH GM+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYD
Sbjct: 431 AQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYD 490
Query: 365 MPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
MP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN V
Sbjct: 491 MPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDV 530
>gi|301771296|ref|XP_002921018.1| PREDICTED: ATP-dependent RNA helicase DDX39-like [Ailuropoda
melanoleuca]
Length = 427
Score = 601 bits (1550), Expect = e-169, Method: Compositional matrix adjust.
Identities = 283/383 (73%), Positives = 327/383 (85%)
Query: 22 QAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAI 81
QAP A + K YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAI
Sbjct: 20 QAPPESTPAAPKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAI 79
Query: 82 LGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYL 141
LGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQVT LV+CHTRELA+QI E+ERFS Y+
Sbjct: 80 LGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYM 139
Query: 142 PDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDK 201
P +KV+VF+GG++IK +++LK CP +VVGTPGRILAL R++ L+LKNV+HF+LDECDK
Sbjct: 140 PSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNRSLNLKNVKHFVLDECDK 199
Query: 202 MLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH 261
MLE LDMRRDVQEIF++TPH+KQ MMFSATLSKEIRPVC+KFMQDPME++VDDE KLTLH
Sbjct: 200 MLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLH 259
Query: 262 GLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSG 321
GL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L +LLVE NFP+I IH G
Sbjct: 260 GLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRG 319
Query: 322 MSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 381
M+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYDMP+ +DTYLHRV RAGR
Sbjct: 320 MAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGR 379
Query: 382 FGTKGLAITFVSSASDSDILNQV 404
FGTKGLAITFVS +D+ ILN V
Sbjct: 380 FGTKGLAITFVSDENDAKILNDV 402
>gi|21040371|ref|NP_005795.2| ATP-dependent RNA helicase DDX39A [Homo sapiens]
gi|301601639|ref|NP_001180420.1| ATP-dependent RNA helicase DDX39A [Macaca mulatta]
gi|297703837|ref|XP_002828833.1| PREDICTED: ATP-dependent RNA helicase DDX39A isoform 1 [Pongo
abelii]
gi|397471066|ref|XP_003807128.1| PREDICTED: ATP-dependent RNA helicase DDX39A [Pan paniscus]
gi|426387515|ref|XP_004060212.1| PREDICTED: ATP-dependent RNA helicase DDX39A isoform 1 [Gorilla
gorilla gorilla]
gi|426387519|ref|XP_004060214.1| PREDICTED: ATP-dependent RNA helicase DDX39A isoform 3 [Gorilla
gorilla gorilla]
gi|61212932|sp|O00148.2|DX39A_HUMAN RecName: Full=ATP-dependent RNA helicase DDX39A; AltName: Full=DEAD
box protein 39; AltName: Full=Nuclear RNA helicase URH49
gi|12654373|gb|AAH01009.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 [Homo sapiens]
gi|119604824|gb|EAW84418.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 39, isoform CRA_d [Homo
sapiens]
gi|123980968|gb|ABM82313.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 [synthetic construct]
gi|123995775|gb|ABM85489.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 [synthetic construct]
gi|383415013|gb|AFH30720.1| ATP-dependent RNA helicase DDX39A [Macaca mulatta]
gi|384944666|gb|AFI35938.1| ATP-dependent RNA helicase DDX39A [Macaca mulatta]
gi|410210478|gb|JAA02458.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A [Pan troglodytes]
gi|410253028|gb|JAA14481.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A [Pan troglodytes]
gi|410290144|gb|JAA23672.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A [Pan troglodytes]
Length = 427
Score = 601 bits (1549), Expect = e-169, Method: Compositional matrix adjust.
Identities = 287/400 (71%), Positives = 339/400 (84%), Gaps = 1/400 (0%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDS 64
+ + E++LLDY+EE+ +T A + KG YV IHSSGFRDFLLKPELLRAIVD
Sbjct: 3 EQDVENDLLDYDEEEEPQAPQESTPAPPKKDIKGSYVSIHSSGFRDFLLKPELLRAIVDC 62
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQVT LV+CHTR
Sbjct: 63 GFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTR 122
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDK 184
ELA+QI E+ERFS Y+P +KV+VF+GG++IK +++LK CP +VVGTPGRILAL R++
Sbjct: 123 ELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNR 182
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 244
SLKNV+HF+LDECDKMLE LDMRRDVQEIF++TPH+KQ MMFSATLSK+IRPVC+KFM
Sbjct: 183 SFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCRKFM 242
Query: 245 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 304
QDPME++VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQV+IFVKSV R L
Sbjct: 243 QDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVIIFVKSVQRCMAL 302
Query: 305 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 364
+LLVE NFP+I IH GM+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYD
Sbjct: 303 AQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYD 362
Query: 365 MPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
MP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN V
Sbjct: 363 MPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDV 402
>gi|281353060|gb|EFB28644.1| hypothetical protein PANDA_009904 [Ailuropoda melanoleuca]
Length = 422
Score = 601 bits (1549), Expect = e-169, Method: Compositional matrix adjust.
Identities = 283/383 (73%), Positives = 327/383 (85%)
Query: 22 QAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAI 81
QAP A + K YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAI
Sbjct: 20 QAPPESTPAAPKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAI 79
Query: 82 LGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYL 141
LGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQVT LV+CHTRELA+QI E+ERFS Y+
Sbjct: 80 LGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYM 139
Query: 142 PDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDK 201
P +KV+VF+GG++IK +++LK CP +VVGTPGRILAL R++ L+LKNV+HF+LDECDK
Sbjct: 140 PSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNRSLNLKNVKHFVLDECDK 199
Query: 202 MLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH 261
MLE LDMRRDVQEIF++TPH+KQ MMFSATLSKEIRPVC+KFMQDPME++VDDE KLTLH
Sbjct: 200 MLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLH 259
Query: 262 GLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSG 321
GL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L +LLVE NFP+I IH G
Sbjct: 260 GLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRG 319
Query: 322 MSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 381
M+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYDMP+ +DTYLHRV RAGR
Sbjct: 320 MAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGR 379
Query: 382 FGTKGLAITFVSSASDSDILNQV 404
FGTKGLAITFVS +D+ ILN V
Sbjct: 380 FGTKGLAITFVSDENDAKILNDV 402
>gi|387018188|gb|AFJ51212.1| ATP-dependent RNA helicase DDX39-like [Crotalus adamanteus]
Length = 427
Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust.
Identities = 286/400 (71%), Positives = 336/400 (84%), Gaps = 1/400 (0%)
Query: 6 DNEYEDELLDYEE-EDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDS 64
+ + E+ELLDYE+ E+ Q V + K YV IHSSGFRDFLLKPELLRAIVD
Sbjct: 3 EQDVENELLDYEDDEEPQGVTDVTPPLVKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDC 62
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTR
Sbjct: 63 GFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPLDGQVSVLVMCHTR 122
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDK 184
ELA+QI E+ERFS Y+ ++KV+VF+GG++IK +++LK CP IVVGTPGR LAL R+K
Sbjct: 123 ELAFQISKEYERFSKYMTNVKVSVFFGGLSIKKDEEVLKKNCPHIVVGTPGRTLALVRNK 182
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 244
L+L+NV+HF+LDECDKMLE LDMRRDVQEIF++TP +KQ MMFSATLSKEIRPVC+KFM
Sbjct: 183 TLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPPEKQCMMFSATLSKEIRPVCRKFM 242
Query: 245 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 304
QDPME++VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L
Sbjct: 243 QDPMEVFVDDETKLTLHGLQQYYVKLKDTEKNRKLFDLLDVLEFNQVVIFVKSVQRCMAL 302
Query: 305 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 364
+LL+E NFP+I IH GMSQEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYD
Sbjct: 303 AQLLIEQNFPAIAIHRGMSQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYD 362
Query: 365 MPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
MP+ +DTYLHRV RAGRFGTKGLAITFVS D+ ILN+V
Sbjct: 363 MPEDSDTYLHRVARAGRFGTKGLAITFVSDEGDAKILNEV 402
>gi|348520870|ref|XP_003447950.1| PREDICTED: ATP-dependent RNA helicase DDX39A-like [Oreochromis
niloticus]
Length = 427
Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust.
Identities = 282/381 (74%), Positives = 329/381 (86%), Gaps = 1/381 (0%)
Query: 24 PDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILG 83
P+S T AN + K YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAILG
Sbjct: 23 PES-GTPANKKEVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILG 81
Query: 84 MDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPD 143
MD++CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTRELA+QI E+ERFS Y+P
Sbjct: 82 MDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCHTRELAFQISKEYERFSKYMPT 141
Query: 144 IKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 203
+KV+VF+GG+ IK +++LK CP IVVGTPGR LAL R+K LS+KN++HF+LDECDKML
Sbjct: 142 VKVSVFFGGMAIKKDEEVLKKNCPHIVVGTPGRTLALIRNKTLSVKNIKHFVLDECDKML 201
Query: 204 ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGL 263
E LDMRRDVQEIF++TPH+KQVMMFSATLSKEIRPVC+KFMQDPME++VDDE KLTLHGL
Sbjct: 202 EQLDMRRDVQEIFRLTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGL 261
Query: 264 VQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMS 323
Q+Y KL + EKNRKL DLLD L+FNQVVIFVKSV+R L++LLVE NFP+I IH GM+
Sbjct: 262 QQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVARCVALSQLLVEQNFPAIAIHRGMA 321
Query: 324 QEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 383
QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYDMP+ +DTYLHRV RAGRFG
Sbjct: 322 QEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFG 381
Query: 384 TKGLAITFVSSASDSDILNQV 404
TKGLA+TFVS SD+ LN+V
Sbjct: 382 TKGLAVTFVSDESDAKTLNEV 402
>gi|47085711|ref|NP_998142.1| ATP-dependent RNA helicase DDX39 [Danio rerio]
gi|28278325|gb|AAH44169.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 39b [Danio rerio]
gi|45709039|gb|AAH67555.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 39b [Danio rerio]
gi|118763876|gb|AAI28805.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 39b [Danio rerio]
gi|169154009|emb|CAQ13699.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 39b [Danio rerio]
gi|182889946|gb|AAI65847.1| Ddx39b protein [Danio rerio]
Length = 427
Score = 600 bits (1546), Expect = e-169, Method: Compositional matrix adjust.
Identities = 285/382 (74%), Positives = 328/382 (85%), Gaps = 1/382 (0%)
Query: 23 APDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAIL 82
AP+S A E K YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAIL
Sbjct: 22 APESAAPVGKKEV-KGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAIL 80
Query: 83 GMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLP 142
GMD++CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTRELA+QI E+ERFS Y+P
Sbjct: 81 GMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCHTRELAFQISKEYERFSKYMP 140
Query: 143 DIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKM 202
+KVAVF+GG++IK +D+LK CP IVVGTPGRILAL R+K L+LKNV+HF+LDECDKM
Sbjct: 141 TVKVAVFFGGMSIKKDEDVLKKSCPHIVVGTPGRILALVRNKTLNLKNVKHFVLDECDKM 200
Query: 203 LESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHG 262
LE LDMRRDVQ+IF++TPH+KQ MMFSATLSKEIRPVC+KFMQDPME++VDDE KLTLHG
Sbjct: 201 LEQLDMRRDVQDIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHG 260
Query: 263 LVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGM 322
L Q+Y KL + EKNRKL DLLD L+FNQVVIFVKSV R L++LLVE NFP+I IH GM
Sbjct: 261 LQQYYCKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCVALSQLLVEQNFPAIAIHRGM 320
Query: 323 SQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRF 382
+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYDMP+ +DTYLHRV RAGRF
Sbjct: 321 AQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRF 380
Query: 383 GTKGLAITFVSSASDSDILNQV 404
GTKGLAITFVS +D+ ILN V
Sbjct: 381 GTKGLAITFVSDETDAKILNDV 402
>gi|126323154|ref|XP_001366378.1| PREDICTED: ATP-dependent RNA helicase DDX39A-like [Monodelphis
domestica]
Length = 427
Score = 600 bits (1546), Expect = e-169, Method: Compositional matrix adjust.
Identities = 284/380 (74%), Positives = 327/380 (86%), Gaps = 1/380 (0%)
Query: 25 DSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGM 84
+S T A + K YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAILGM
Sbjct: 24 ESTPTPAKKDV-KGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGM 82
Query: 85 DVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDI 144
DV+CQAKSGMGKTAVFVL+TLQQ EP GQVT LV+CHTRELA+QI E+ERFS Y+P++
Sbjct: 83 DVLCQAKSGMGKTAVFVLATLQQIEPVDGQVTVLVMCHTRELAFQISKEYERFSKYMPNV 142
Query: 145 KVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLE 204
KV+VF+GG++IK +D+LK CP +VVGTPGRILAL R+K L+LKNV+HF+LDECDKMLE
Sbjct: 143 KVSVFFGGLSIKKDEDVLKKNCPHVVVGTPGRILALVRNKSLNLKNVKHFVLDECDKMLE 202
Query: 205 SLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLV 264
LDMRRDVQEIF++TPH+KQ MMFSATLSKEIRPVC+KFMQDPME++VDDE KLTLHGL
Sbjct: 203 QLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQ 262
Query: 265 QHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQ 324
Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L +LLVE NFP+I IH GM+Q
Sbjct: 263 QYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCVALAQLLVEQNFPAIAIHRGMAQ 322
Query: 325 EERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGT 384
EERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYDMP+ +DTYLHRV RAGRFGT
Sbjct: 323 EERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGT 382
Query: 385 KGLAITFVSSASDSDILNQV 404
KGLAITFVS D+ ILN V
Sbjct: 383 KGLAITFVSDEGDAKILNDV 402
>gi|348511173|ref|XP_003443119.1| PREDICTED: ATP-dependent RNA helicase DDX39A-like [Oreochromis
niloticus]
Length = 427
Score = 600 bits (1546), Expect = e-169, Method: Compositional matrix adjust.
Identities = 286/382 (74%), Positives = 327/382 (85%), Gaps = 1/382 (0%)
Query: 23 APDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAIL 82
AP+S AT A + K YV IHSSGFRDFLLKPELLRAI+D GFEHPSEVQHECIPQAIL
Sbjct: 22 APES-ATPAGKKEVKGSYVSIHSSGFRDFLLKPELLRAIIDCGFEHPSEVQHECIPQAIL 80
Query: 83 GMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLP 142
GMD++CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTRELA+QI E+ERFS Y+P
Sbjct: 81 GMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCHTRELAFQISKEYERFSKYMP 140
Query: 143 DIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKM 202
IK AVF+GG+ IK +D+LK CP IVVGTPGRILAL R+K LSLKNV+HF+LDECDKM
Sbjct: 141 TIKAAVFFGGLPIKKDEDVLKKNCPHIVVGTPGRILALIRNKTLSLKNVKHFVLDECDKM 200
Query: 203 LESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHG 262
LE LDMRRDVQ+IF++TPH+KQVMMFSATLSKEIRPVC+KFMQDPME++VDDE KLTLHG
Sbjct: 201 LEQLDMRRDVQDIFRITPHEKQVMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHG 260
Query: 263 LVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGM 322
L Q+Y KL + EKNRKL DLLD L+FNQVVIFVKSV R L++LLVE NFP+I IH GM
Sbjct: 261 LQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCVALSQLLVEQNFPAIAIHRGM 320
Query: 323 SQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRF 382
QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYDMP+ +DTYLHRV RAGRF
Sbjct: 321 VQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRF 380
Query: 383 GTKGLAITFVSSASDSDILNQV 404
GTKGLAITFVS +D+ LN V
Sbjct: 381 GTKGLAITFVSDETDAKTLNDV 402
>gi|20302732|gb|AAM18861.1|AF391287_2 unknown [Branchiostoma floridae]
Length = 427
Score = 599 bits (1545), Expect = e-169, Method: Compositional matrix adjust.
Identities = 294/399 (73%), Positives = 330/399 (82%), Gaps = 2/399 (0%)
Query: 8 EYEDELLDYEEEDAQAPDSVA--TKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSG 65
E E+ELLDYEEE+ + A T + K YV IHSSGFRDFLLKPELLRAIVD G
Sbjct: 4 EGENELLDYEEEEQETTTEAAGDTAVQKKEVKGSYVSIHSSGFRDFLLKPELLRAIVDCG 63
Query: 66 FEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRE 125
FEHPSEVQHECIPQAIL MDV+CQAKSGMGKTAVFVL+TLQQ EP GQV LV+CHTRE
Sbjct: 64 FEHPSEVQHECIPQAILSMDVLCQAKSGMGKTAVFVLATLQQIEPVDGQVAVLVMCHTRE 123
Query: 126 LAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKD 185
LA+QI E+ERFS Y+P IK AVF+GG+ I+ ++ LK CP IVV TPGR+LALARDK
Sbjct: 124 LAFQISKEYERFSKYMPTIKNAVFFGGMPIQKDRNTLKTNCPHIVVATPGRLLALARDKS 183
Query: 186 LSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQ 245
L+LK+V+HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIRPVCKKFMQ
Sbjct: 184 LNLKHVKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCKKFMQ 243
Query: 246 DPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELN 305
DPME+YVDDE KLTLHGL QHY+KL + EKNRKL DLLD L+FNQVVIFVKSV R L
Sbjct: 244 DPMEVYVDDETKLTLHGLQQHYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALA 303
Query: 306 KLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDM 365
+LLVE NFP+I IH M QEERL RY FK +RILVAT+L GRG+DIERVNIV NYDM
Sbjct: 304 QLLVEQNFPAIAIHRAMGQEERLKRYNQFKNFERRILVATNLFGRGMDIERVNIVFNYDM 363
Query: 366 PDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
P+ +DTYLHRV RAGRFGTKGLAITFVS +D+ +LN+V
Sbjct: 364 PEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKVLNEV 402
>gi|395512966|ref|XP_003760703.1| PREDICTED: ATP-dependent RNA helicase DDX39A [Sarcophilus harrisii]
Length = 427
Score = 599 bits (1545), Expect = e-169, Method: Compositional matrix adjust.
Identities = 284/380 (74%), Positives = 326/380 (85%), Gaps = 1/380 (0%)
Query: 25 DSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGM 84
+S T A + K YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAILGM
Sbjct: 24 ESTPTPAKKDV-KGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGM 82
Query: 85 DVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDI 144
DV+CQAKSGMGKTAVFVL+TLQQ EP GQVT LV+CHTRELA+QI E+ERFS Y+P +
Sbjct: 83 DVLCQAKSGMGKTAVFVLATLQQIEPVDGQVTVLVMCHTRELAFQISKEYERFSKYMPSV 142
Query: 145 KVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLE 204
KV+VF+GG++IK +D+LK CP +VVGTPGRILAL R+K L+LKNV+HF+LDECDKMLE
Sbjct: 143 KVSVFFGGLSIKKDEDVLKKNCPHVVVGTPGRILALVRNKSLNLKNVKHFVLDECDKMLE 202
Query: 205 SLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLV 264
LDMRRDVQEIF++TPH+KQ MMFSATLSKEIRPVC+KFMQDPME++VDDE KLTLHGL
Sbjct: 203 QLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQ 262
Query: 265 QHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQ 324
Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L +LLVE NFP+I IH GM+Q
Sbjct: 263 QYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCVALAQLLVEQNFPAIAIHRGMAQ 322
Query: 325 EERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGT 384
EERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYDMP+ +DTYLHRV RAGRFGT
Sbjct: 323 EERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGT 382
Query: 385 KGLAITFVSSASDSDILNQV 404
KGLAITFVS D+ ILN V
Sbjct: 383 KGLAITFVSDEGDAKILNDV 402
>gi|73986746|ref|XP_533895.2| PREDICTED: ATP-dependent RNA helicase DDX39A [Canis lupus
familiaris]
gi|395850755|ref|XP_003797941.1| PREDICTED: ATP-dependent RNA helicase DDX39A [Otolemur garnettii]
gi|410950598|ref|XP_003981991.1| PREDICTED: ATP-dependent RNA helicase DDX39A [Felis catus]
Length = 427
Score = 599 bits (1545), Expect = e-169, Method: Compositional matrix adjust.
Identities = 282/383 (73%), Positives = 326/383 (85%)
Query: 22 QAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAI 81
QAP + K YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAI
Sbjct: 20 QAPPESTPAPPKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAI 79
Query: 82 LGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYL 141
LGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQVT LV+CHTRELA+QI E+ERFS Y+
Sbjct: 80 LGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYM 139
Query: 142 PDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDK 201
P +KV+VF+GG++IK +++LK CP +VVGTPGRILAL R++ L+LKNV+HF+LDECDK
Sbjct: 140 PSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNRSLNLKNVKHFVLDECDK 199
Query: 202 MLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH 261
MLE LDMRRDVQEIF++TPH+KQ MMFSATLSKEIRPVC+KFMQDPME++VDDE KLTLH
Sbjct: 200 MLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLH 259
Query: 262 GLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSG 321
GL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L +LLVE NFP+I IH G
Sbjct: 260 GLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRG 319
Query: 322 MSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 381
M+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYDMP+ +DTYLHRV RAGR
Sbjct: 320 MAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGR 379
Query: 382 FGTKGLAITFVSSASDSDILNQV 404
FGTKGLAITFVS +D+ ILN V
Sbjct: 380 FGTKGLAITFVSDENDAKILNDV 402
>gi|355755539|gb|EHH59286.1| ATP-dependent RNA helicase DDX39, partial [Macaca fascicularis]
Length = 465
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 287/400 (71%), Positives = 339/400 (84%), Gaps = 1/400 (0%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDS 64
+ + E++LLDY+EE+ +T A + KG YV IHSSGFRDFLLKPELLRAIVD
Sbjct: 46 EQDVENDLLDYDEEEEPQAPQESTPAPPKKDIKGSYVSIHSSGFRDFLLKPELLRAIVDC 105
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQVT LV+CHTR
Sbjct: 106 GFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTR 165
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDK 184
ELA+QI E+ERFS Y+P +KV+VF+GG++IK +++LK CP +VVGTPGRILAL R++
Sbjct: 166 ELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNR 225
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 244
SLKNV+HF+LDECDKMLE LDMRRDVQEIF++TPH+KQ MMFSATLSK+IRPVC+KFM
Sbjct: 226 SFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCRKFM 285
Query: 245 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 304
QDPME++VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQV+IFVKSV R L
Sbjct: 286 QDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVIIFVKSVQRCMAL 345
Query: 305 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 364
+LLVE NFP+I IH GM+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYD
Sbjct: 346 AQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYD 405
Query: 365 MPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
MP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN V
Sbjct: 406 MPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDV 445
>gi|195999078|ref|XP_002109407.1| conserved hypothetical protein [Trichoplax adhaerens]
gi|190587531|gb|EDV27573.1| conserved hypothetical protein [Trichoplax adhaerens]
Length = 425
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 293/399 (73%), Positives = 334/399 (83%), Gaps = 2/399 (0%)
Query: 8 EYEDELLDYEEEDAQAPDSV--ATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSG 65
E + ELLDY+EE+ A + + AT N + K YV IHSSGFRDFLLKPELLRAIVD G
Sbjct: 3 EVDHELLDYDEEENDAAEELESATTGNNKEVKGSYVSIHSSGFRDFLLKPELLRAIVDCG 62
Query: 66 FEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRE 125
FEHPS VQHECIPQAILGMDVICQAKSGMGKTAVFVL+TLQQ +P +V+ LVLCHTRE
Sbjct: 63 FEHPSAVQHECIPQAILGMDVICQAKSGMGKTAVFVLATLQQLDPVDNEVSVLVLCHTRE 122
Query: 126 LAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKD 185
LA+QI E++RFS Y+ ++KVAVF+GG+NIK + LK+ CP IVVGTPGR+LAL R+K
Sbjct: 123 LAFQISKEYDRFSKYMDNVKVAVFFGGINIKKDQATLKSSCPHIVVGTPGRMLALVREKS 182
Query: 186 LSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQ 245
L+LKN +HFILDECDKMLE LDMRRDVQEIF+MTPH KQVMMFSATLSKEIRPVCKKFMQ
Sbjct: 183 LNLKNCKHFILDECDKMLEQLDMRRDVQEIFRMTPHQKQVMMFSATLSKEIRPVCKKFMQ 242
Query: 246 DPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELN 305
DPME+YVDD+ KLTLHGL QHY+KL + EKNRKL DLLD L+FNQV+IFVKSV R L
Sbjct: 243 DPMEVYVDDDTKLTLHGLRQHYVKLKDHEKNRKLFDLLDILEFNQVIIFVKSVQRCVALT 302
Query: 306 KLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDM 365
+LLVE NFP+I IH GMSQE+RL Y FK NKRILVAT+L GRG+DIERVNIV NYDM
Sbjct: 303 QLLVEQNFPAISIHRGMSQEDRLKHYGEFKNFNKRILVATNLFGRGMDIERVNIVFNYDM 362
Query: 366 PDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
P+ +DTYLHRV RAGRFGTKGLA+TFVSS D+ ILN+V
Sbjct: 363 PEDSDTYLHRVARAGRFGTKGLAVTFVSSQEDAKILNEV 401
>gi|10439505|dbj|BAB15509.1| unnamed protein product [Homo sapiens]
Length = 461
Score = 598 bits (1543), Expect = e-168, Method: Compositional matrix adjust.
Identities = 286/400 (71%), Positives = 339/400 (84%), Gaps = 1/400 (0%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDS 64
+ + E++LLDY+EE+ +T A + KG +V IHSSGFRDFLLKPELLRAIVD
Sbjct: 37 EQDVENDLLDYDEEEEPQAPQESTPAPPKKDIKGSHVSIHSSGFRDFLLKPELLRAIVDC 96
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQVT LV+CHTR
Sbjct: 97 GFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTR 156
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDK 184
ELA+QI E+ERFS Y+P +KV+VF+GG++IK +++LK CP +VVGTPGRILAL R++
Sbjct: 157 ELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNR 216
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 244
SLKNV+HF+LDECDKMLE LDMRRDVQEIF++TPH+KQ MMFSATLSK+IRPVC+KFM
Sbjct: 217 SFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCRKFM 276
Query: 245 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 304
QDPME++VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQV+IFVKSV R L
Sbjct: 277 QDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVIIFVKSVQRCMAL 336
Query: 305 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 364
+LLVE NFP+I IH GM+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYD
Sbjct: 337 AQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYD 396
Query: 365 MPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
MP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN V
Sbjct: 397 MPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDV 436
>gi|225708116|gb|ACO09904.1| ATP-dependent RNA helicase DDX39 [Osmerus mordax]
Length = 427
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 282/382 (73%), Positives = 329/382 (86%), Gaps = 1/382 (0%)
Query: 23 APDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAIL 82
AP++ AT A + K YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAIL
Sbjct: 22 APEA-ATPAGKKEVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAIL 80
Query: 83 GMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLP 142
GMD++CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTRELA+QI E+ERFS Y+P
Sbjct: 81 GMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCHTRELAFQISKEYERFSKYMP 140
Query: 143 DIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKM 202
+K AVF+GG+ IK +++LK CP IVVGTPGRILAL+R+K LSLKNV+HF+LDECDKM
Sbjct: 141 TVKAAVFFGGMAIKKDEEVLKKNCPHIVVGTPGRILALSRNKTLSLKNVKHFVLDECDKM 200
Query: 203 LESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHG 262
LE+LDMRRDVQ+IF++TPH+KQ MMFSATLSKEIRPVC+KFMQDPME++VDDE KLTLHG
Sbjct: 201 LEALDMRRDVQDIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHG 260
Query: 263 LVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGM 322
L Q+Y KL + EKNRKL DLLD L+FNQVVIFVKSV R L++LLVE NFP+I IH GM
Sbjct: 261 LQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCVALSQLLVEQNFPAIAIHRGM 320
Query: 323 SQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRF 382
+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYDMP+ +DTYLHRV RAGRF
Sbjct: 321 AQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRF 380
Query: 383 GTKGLAITFVSSASDSDILNQV 404
GTKGLA+TFVS +D+ LN V
Sbjct: 381 GTKGLAVTFVSDETDAKTLNDV 402
>gi|221131178|ref|XP_002164853.1| PREDICTED: spliceosome RNA helicase DDX39B-like [Hydra
magnipapillata]
Length = 433
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 291/408 (71%), Positives = 338/408 (82%), Gaps = 7/408 (1%)
Query: 1 MGETRDNEYEDELLDYEEE---DAQAPDSV-ATKANGEAAKKGYVGIHSSGFRDFLLKPE 56
M + +D E+ + DYEE+ +A A D V AT + + K YV IHSSGFRDFLLKPE
Sbjct: 1 MADVQDEEF---IPDYEEQSDNEAAAEDGVQATDSVKKEVKGTYVSIHSSGFRDFLLKPE 57
Query: 57 LLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVT 116
LLRAIVD GFEHPSEVQHECIPQAILGMD++CQAKSGMGKTAVFVL+TLQQ EP QV+
Sbjct: 58 LLRAIVDCGFEHPSEVQHECIPQAILGMDIVCQAKSGMGKTAVFVLATLQQLEPVDSQVS 117
Query: 117 ALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGR 176
LV+ HTRELA+Q+ E+ERFS YLP+ KVAVF+GG+++K + LK CP IVVGTPGR
Sbjct: 118 VLVMSHTRELAFQVSKEYERFSKYLPNTKVAVFFGGLSVKKDEQTLKTNCPHIVVGTPGR 177
Query: 177 ILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEI 236
ILALARDK L+LK+V+HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATL+KE+
Sbjct: 178 ILALARDKVLNLKHVKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLNKEM 237
Query: 237 RPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVK 296
R VCKKFMQDPME+YVDDE KLTLHGL QHY KL + EKNRKL DLLDAL+FNQV+IFVK
Sbjct: 238 RLVCKKFMQDPMEVYVDDETKLTLHGLTQHYCKLKDNEKNRKLFDLLDALEFNQVIIFVK 297
Query: 297 SVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIER 356
SV R L+ LLVE NFP+I IH M QEER++RY+ FK+ KRILVAT+L GRG+DIER
Sbjct: 298 SVQRCIALSNLLVEQNFPAIAIHRSMPQEERISRYRQFKDFQKRILVATNLFGRGMDIER 357
Query: 357 VNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
VNIV+NYDMP+ +DTYLHRV RAGRFGTKGLAI+FVS D+ +LN V
Sbjct: 358 VNIVVNYDMPEDSDTYLHRVARAGRFGTKGLAISFVSDEEDAKVLNGV 405
>gi|41055604|ref|NP_957237.1| HLA-B associated transcript 1 [Danio rerio]
gi|32766427|gb|AAH55240.1| HLA-B associated transcript 1 [Danio rerio]
gi|126632630|emb|CAM56334.1| HLA-B associated transcript 1 [Danio rerio]
Length = 435
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 288/409 (70%), Positives = 338/409 (82%), Gaps = 11/409 (2%)
Query: 6 DNEYEDELLDYEEEDAQA----------PDSVATKANGEAAKKGYVGIHSSGFRDFLLKP 55
+N+ ++ELLDYEE++ A D + + E K YV IHSSGFRDFLLKP
Sbjct: 3 ENDVDNELLDYEEDEVDAGGAGDAGLGHSDGIIS-IRKEGVKGSYVSIHSSGFRDFLLKP 61
Query: 56 ELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQV 115
ELLRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV
Sbjct: 62 ELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQV 121
Query: 116 TALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPG 175
+ LV+CHTRELA+QI E+ERFS Y+P +KVAVF+GG++IK +++LK E P +VVGTPG
Sbjct: 122 SVLVMCHTRELAFQISKEYERFSKYMPSVKVAVFFGGLSIKKDEEVLKKESPHVVVGTPG 181
Query: 176 RILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKE 235
RILAL+R+K L+L++++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKE
Sbjct: 182 RILALSRNKSLNLRHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKE 241
Query: 236 IRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFV 295
IRPVC+KFMQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFV
Sbjct: 242 IRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFV 301
Query: 296 KSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIE 355
KSV R L +LLVE NFP+I IH M Q+ERL RY+ FK+ +RILVAT+L GRG+DIE
Sbjct: 302 KSVQRCIALAQLLVEQNFPAIAIHRAMPQDERLARYQQFKDFQRRILVATNLFGRGMDIE 361
Query: 356 RVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
RVNI NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ LN V
Sbjct: 362 RVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDARTLNDV 410
>gi|194377854|dbj|BAG63290.1| unnamed protein product [Homo sapiens]
Length = 470
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 286/400 (71%), Positives = 338/400 (84%), Gaps = 1/400 (0%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDS 64
+ + E++LLDY+EE+ +T A + KG YV IHSSGFRDFLLKPELLRAIVD
Sbjct: 46 EQDVENDLLDYDEEEEPQAPQESTPAPPKKDIKGSYVSIHSSGFRDFLLKPELLRAIVDC 105
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQVT LV+CHTR
Sbjct: 106 GFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTR 165
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDK 184
ELA+QI E+ERFS Y+P +KV+VF+GG++IK +++LK CP +VVGTPGRILAL R++
Sbjct: 166 ELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNR 225
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 244
SLKNV+HF+LDECDKML LDMRRDVQEIF++TPH+KQ MMFSATLSK+IRPVC+KFM
Sbjct: 226 SFSLKNVKHFVLDECDKMLGQLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCRKFM 285
Query: 245 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 304
QDPME++VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQV+IFVKSV R L
Sbjct: 286 QDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVIIFVKSVQRCMAL 345
Query: 305 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 364
+LLVE NFP+I IH GM+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYD
Sbjct: 346 AQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYD 405
Query: 365 MPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
MP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN V
Sbjct: 406 MPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDV 445
>gi|431898055|gb|ELK06762.1| ATP-dependent RNA helicase DDX39 [Pteropus alecto]
Length = 484
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 281/383 (73%), Positives = 326/383 (85%)
Query: 22 QAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAI 81
QAP + K YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAI
Sbjct: 77 QAPAESTPAPPKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAI 136
Query: 82 LGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYL 141
LGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQVT LV+CHTRELA+QI E+ERFS Y+
Sbjct: 137 LGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYM 196
Query: 142 PDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDK 201
P +KV+VF+GG++IK +++LK CP +VVGTPGRILAL R++ L+L+NV+HF+LDECDK
Sbjct: 197 PSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNRSLNLRNVKHFVLDECDK 256
Query: 202 MLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH 261
MLE LDMRRDVQEIF++TPH+KQ MMFSATLSKEIRPVC+KFMQDPME++VDDE KLTLH
Sbjct: 257 MLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLH 316
Query: 262 GLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSG 321
GL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L +LLVE NFP+I IH G
Sbjct: 317 GLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRG 376
Query: 322 MSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 381
M+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYDMP+ +DTYLHRV RAGR
Sbjct: 377 MAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGR 436
Query: 382 FGTKGLAITFVSSASDSDILNQV 404
FGTKGLAITFVS +D+ ILN V
Sbjct: 437 FGTKGLAITFVSDENDAKILNDV 459
>gi|221221068|gb|ACM09195.1| ATP-dependent RNA helicase DDX39 [Salmo salar]
gi|223647064|gb|ACN10290.1| ATP-dependent RNA helicase DDX39 [Salmo salar]
gi|223672933|gb|ACN12648.1| ATP-dependent RNA helicase DDX39 [Salmo salar]
Length = 427
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 282/382 (73%), Positives = 328/382 (85%), Gaps = 1/382 (0%)
Query: 23 APDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAIL 82
AP++ AT A + K YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAIL
Sbjct: 22 APET-ATPAGKKEVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAIL 80
Query: 83 GMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLP 142
GMD++CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTRELA+QI E+ERFS Y+P
Sbjct: 81 GMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCHTRELAFQISKEYERFSKYMP 140
Query: 143 DIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKM 202
+K AVF+GG++IK +D+LK CP IVVGTPGRILAL R+K L+LKNV+HF+LDECDKM
Sbjct: 141 TVKAAVFFGGLSIKKDEDVLKKNCPHIVVGTPGRILALIRNKTLNLKNVKHFVLDECDKM 200
Query: 203 LESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHG 262
LE LDMRRDVQ+IF++TPH+KQ MMFSATLSKEIRPVC+KFMQDPME++VDDE KLTLHG
Sbjct: 201 LEQLDMRRDVQDIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHG 260
Query: 263 LVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGM 322
L Q+Y KL + EKNRKL DLLD L+FNQVVIFVKSV R L++LLVE NFP+I IH GM
Sbjct: 261 LQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCVALSQLLVEQNFPAIAIHRGM 320
Query: 323 SQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRF 382
+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYDMP+ +DTYLHRV RAGRF
Sbjct: 321 AQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRF 380
Query: 383 GTKGLAITFVSSASDSDILNQV 404
GTKGLA+TFVS +D+ LN V
Sbjct: 381 GTKGLAVTFVSDETDAKTLNDV 402
>gi|348542184|ref|XP_003458566.1| PREDICTED: spliceosome RNA helicase DDX39B-like [Oreochromis
niloticus]
Length = 435
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 290/416 (69%), Positives = 340/416 (81%), Gaps = 6/416 (1%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANG------EAAKKGYVGIHSSGFRDFLLKPELLR 59
+N+ ++ELLDYE+++ +A + E K YV IHSSGFRDFLLKPELLR
Sbjct: 3 ENDVDNELLDYEDDEVEAGGAGDVGGASDVSIRKEGVKGSYVSIHSSGFRDFLLKPELLR 62
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
AIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV
Sbjct: 63 AIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPITGQVSVLV 122
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA 179
+CHTRELA+QI E+ERFS Y+P +KVAVF+GG+ IK +++LK + P IVVGTPGRILA
Sbjct: 123 MCHTRELAFQISKEYERFSKYMPTVKVAVFFGGLPIKKDEEVLKKDSPHIVVGTPGRILA 182
Query: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
L R+K L+L++++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIRPV
Sbjct: 183 LTRNKTLNLRHMKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPV 242
Query: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 299
C+KFMQDPMEI+VDDE KLTL+GL Q+Y+KL + EKNRKL DLLDAL+FNQVVIFVKSV
Sbjct: 243 CRKFMQDPMEIFVDDETKLTLNGLQQYYVKLKDNEKNRKLFDLLDALEFNQVVIFVKSVQ 302
Query: 300 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNI 359
R L +LLVE NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNI
Sbjct: 303 RCVALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNI 362
Query: 360 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKFMFLLIGSF 415
NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS D+ LN V + IG
Sbjct: 363 AFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEGDARTLNDVQDRFEVNIGEL 418
>gi|335282778|ref|XP_003123418.2| PREDICTED: ATP-dependent RNA helicase DDX39A-like isoform 1 [Sus
scrofa]
gi|335282780|ref|XP_003354153.1| PREDICTED: ATP-dependent RNA helicase DDX39A-like isoform 2 [Sus
scrofa]
Length = 427
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 279/369 (75%), Positives = 322/369 (87%)
Query: 36 AKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMG 95
K YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMG
Sbjct: 34 VKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMG 93
Query: 96 KTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNI 155
KTAVFVL+TLQQ EP GQVT LV+CHTRELA+QI E+ERFS Y+P +KV+VF+GG++I
Sbjct: 94 KTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSI 153
Query: 156 KIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEI 215
K +++LK CP +VVGTPGRILAL R++ L+LKNV+HF+LDECDKMLE LDMRRDVQEI
Sbjct: 154 KKDEEVLKKNCPHVVVGTPGRILALVRNRSLNLKNVKHFVLDECDKMLEQLDMRRDVQEI 213
Query: 216 FKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEK 275
F++TPH+KQ MMFSATLSKEIRPVC+KFMQDPME++VDDE KLTLHGL Q+Y+KL + EK
Sbjct: 214 FRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEK 273
Query: 276 NRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFK 335
NRKL DLLD L+FNQVVIFVKSV R L +LLVE NFP+I IH GM+QEERL+RY+ FK
Sbjct: 274 NRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFK 333
Query: 336 EGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSA 395
+ +RILVAT+L GRG+DIERVNIV NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS
Sbjct: 334 DFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDE 393
Query: 396 SDSDILNQV 404
+D+ ILN V
Sbjct: 394 NDAKILNDV 402
>gi|432843030|ref|XP_004065549.1| PREDICTED: ATP-dependent RNA helicase DDX39A-like [Oryzias latipes]
Length = 427
Score = 597 bits (1539), Expect = e-168, Method: Compositional matrix adjust.
Identities = 282/381 (74%), Positives = 327/381 (85%), Gaps = 1/381 (0%)
Query: 24 PDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILG 83
P+S T A + K YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAILG
Sbjct: 23 PES-GTPAGKKEVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILG 81
Query: 84 MDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPD 143
MD++CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTRELA+QI E+ERFS Y+P
Sbjct: 82 MDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCHTRELAFQISKEYERFSKYMPS 141
Query: 144 IKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 203
+KV+VF+GG+ IK ++D LK CP IVVGTPGR LAL R+K LS+KN++HF+LDECDKML
Sbjct: 142 VKVSVFFGGMAIKNNEDTLKKNCPHIVVGTPGRTLALIRNKTLSVKNIKHFVLDECDKML 201
Query: 204 ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGL 263
E LDMRRDVQEIF++TPH+KQVMMFSATLSKEIRPVC+KFMQDPME++VDDE KLTLHGL
Sbjct: 202 EQLDMRRDVQEIFRLTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGL 261
Query: 264 VQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMS 323
Q+Y KL + EKNRKL DLLD L+FNQVVIFVKSV+R L++LLVE NFP+I IH GM+
Sbjct: 262 QQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVNRCVALSQLLVEQNFPAIAIHRGMA 321
Query: 324 QEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 383
QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYDMP+ +DTYLHRV RAGRFG
Sbjct: 322 QEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFG 381
Query: 384 TKGLAITFVSSASDSDILNQV 404
TKGLAITFVS D+ LN+V
Sbjct: 382 TKGLAITFVSDEVDAKTLNEV 402
>gi|412985431|emb|CCO18877.1| ATP-dependent RNA helicase DDX39 [Bathycoccus prasinos]
Length = 429
Score = 597 bits (1539), Expect = e-168, Method: Compositional matrix adjust.
Identities = 278/365 (76%), Positives = 316/365 (86%)
Query: 40 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 99
YVG+HS+GFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAV
Sbjct: 42 YVGMHSTGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAV 101
Query: 100 FVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHK 159
FV++ LQQ +P+PG+V A+++CHTRELAYQI HE RFS ++P++K AV YGGVNIK +
Sbjct: 102 FVITVLQQLDPSPGEVGAVIICHTRELAYQISHEMTRFSAHMPNVKCAVIYGGVNIKTQR 161
Query: 160 DLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
+ LK P ++V TPGR+ LA++ +SLK HFILDECDK LE LDMR DVQEIFK+T
Sbjct: 162 EELKANMPNVIVATPGRLKVLAQEGTISLKKCAHFILDECDKCLEKLDMRADVQEIFKLT 221
Query: 220 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKL 279
PHDKQVMMF+ATLSKE+RPVCKKFM DPMEI+VDDE KLTLHGLVQHY+KL E EKNRKL
Sbjct: 222 PHDKQVMMFTATLSKELRPVCKKFMNDPMEIFVDDETKLTLHGLVQHYVKLEEQEKNRKL 281
Query: 280 NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNK 339
DLLDAL FNQVVIFV SV+R L+KL+ ECNFPSI I MSQEERL RY+ FK+GNK
Sbjct: 282 TDLLDALQFNQVVIFVSSVARCTALDKLMQECNFPSIAISRAMSQEERLLRYQSFKDGNK 341
Query: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSD 399
RILVATDLV RGIDIERVNIVINYDMP ADTYLHRVGRAGRFGTKGLAI+FVSS+ DSD
Sbjct: 342 RILVATDLVARGIDIERVNIVINYDMPGDADTYLHRVGRAGRFGTKGLAISFVSSSEDSD 401
Query: 400 ILNQV 404
+L++V
Sbjct: 402 VLSKV 406
>gi|224587698|gb|ACN58701.1| ATP-dependent RNA helicase DDX39 [Salmo salar]
Length = 422
Score = 597 bits (1538), Expect = e-168, Method: Compositional matrix adjust.
Identities = 282/382 (73%), Positives = 328/382 (85%), Gaps = 1/382 (0%)
Query: 23 APDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAIL 82
AP++ AT A + K YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAIL
Sbjct: 17 APET-ATPAGKKEVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAIL 75
Query: 83 GMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLP 142
GMD++CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTRELA+QI E+ERFS Y+P
Sbjct: 76 GMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCHTRELAFQISKEYERFSKYMP 135
Query: 143 DIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKM 202
+K AVF+GG++IK +D+LK CP IVVGTPGRILAL R+K L+LKNV+HF+LDECDKM
Sbjct: 136 TVKAAVFFGGLSIKKDEDVLKKNCPHIVVGTPGRILALIRNKTLNLKNVKHFVLDECDKM 195
Query: 203 LESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHG 262
LE LDMRRDVQ+IF++TPH+KQ MMFSATLSKEIRPVC+KFMQDPME++VDDE KLTLHG
Sbjct: 196 LEQLDMRRDVQDIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHG 255
Query: 263 LVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGM 322
L Q+Y KL + EKNRKL DLLD L+FNQVVIFVKSV R L++LLVE NFP+I IH GM
Sbjct: 256 LQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCVALSQLLVEQNFPAIAIHRGM 315
Query: 323 SQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRF 382
+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYDMP+ +DTYLHRV RAGRF
Sbjct: 316 AQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRF 375
Query: 383 GTKGLAITFVSSASDSDILNQV 404
GTKGLA+TFVS +D+ LN V
Sbjct: 376 GTKGLAVTFVSDETDAKTLNDV 397
>gi|351713130|gb|EHB16049.1| Spliceosome RNA helicase Bat1 [Heterocephalus glaber]
Length = 436
Score = 597 bits (1538), Expect = e-168, Method: Compositional matrix adjust.
Identities = 289/413 (69%), Positives = 338/413 (81%), Gaps = 13/413 (3%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKAN--GEAAKKGYVGIHSSGFRDFLLKPELLRAIVD 63
+N+ ++ELLDYE+++ + + K YV IHSSGFRDFLLKPELLRAIVD
Sbjct: 3 ENDVDNELLDYEDDEVETAAGAEGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVD 62
Query: 64 SGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQV-------- 115
GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV
Sbjct: 63 CGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVCLRRVGRV 122
Query: 116 ---TALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVG 172
+ LV+CHTRELA+QI E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVG
Sbjct: 123 FWVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVG 182
Query: 173 TPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATL 232
TPGRILALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATL
Sbjct: 183 TPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATL 242
Query: 233 SKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVV 292
KEIRPVC+KFMQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVV
Sbjct: 243 GKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVV 302
Query: 293 IFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGI 352
IFVKSV R L +LLVE NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+
Sbjct: 303 IFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGM 362
Query: 353 DIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVS 405
DIERVNI NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN V
Sbjct: 363 DIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQ 415
>gi|355683284|gb|AER97074.1| DEAD box polypeptide 39 [Mustela putorius furo]
Length = 427
Score = 596 bits (1537), Expect = e-168, Method: Compositional matrix adjust.
Identities = 280/383 (73%), Positives = 325/383 (84%)
Query: 22 QAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAI 81
QAP + K YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAI
Sbjct: 20 QAPPESTPAPPKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAI 79
Query: 82 LGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYL 141
LGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTRELA+QI E+ERFS Y+
Sbjct: 80 LGMDVLCQAKSGMGKTAVFVLATLQQIEPVSGQVSVLVMCHTRELAFQISKEYERFSKYM 139
Query: 142 PDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDK 201
P +KV+VF+GG++IK +++LK CP +VVGTPGRILAL R++ L+LKNV+HF+LDECDK
Sbjct: 140 PSVKVSVFFGGLSIKKDEEILKKNCPHVVVGTPGRILALVRNRSLNLKNVKHFVLDECDK 199
Query: 202 MLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH 261
MLE LDMRRDVQEIF++TPH+KQ MMFSATLSKEIRPVC+KFMQ PME++VDDE KLTLH
Sbjct: 200 MLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQXPMEVFVDDETKLTLH 259
Query: 262 GLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSG 321
GL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L +LLVE NFP+I IH G
Sbjct: 260 GLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRG 319
Query: 322 MSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 381
M+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYDMP+ +DTYLHRV RAGR
Sbjct: 320 MAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGR 379
Query: 382 FGTKGLAITFVSSASDSDILNQV 404
FGTKGLAITFVS +D+ ILN V
Sbjct: 380 FGTKGLAITFVSDENDAKILNDV 402
>gi|344283235|ref|XP_003413378.1| PREDICTED: ATP-dependent RNA helicase DDX39A-like [Loxodonta
africana]
Length = 427
Score = 596 bits (1537), Expect = e-168, Method: Compositional matrix adjust.
Identities = 280/383 (73%), Positives = 327/383 (85%)
Query: 22 QAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAI 81
QAP + + K YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAI
Sbjct: 20 QAPPESTPAPSKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAI 79
Query: 82 LGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYL 141
LGMDV+CQAKSGMGKTA FVL+TLQQ EP GQVT LV+CHTRELA+QI E+ERFS Y+
Sbjct: 80 LGMDVLCQAKSGMGKTAGFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYM 139
Query: 142 PDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDK 201
P++KV+VF+GG++IK +++LK CP +VVGTPGRILAL R++ L+LKNV+HF+LDECDK
Sbjct: 140 PNVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNRSLNLKNVKHFVLDECDK 199
Query: 202 MLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH 261
MLE LDMRRDVQEIF++TPH+KQ MMFSATL+KEIRPVC+KFMQDPME++VDDE KLTLH
Sbjct: 200 MLEQLDMRRDVQEIFRLTPHEKQCMMFSATLNKEIRPVCRKFMQDPMEVFVDDETKLTLH 259
Query: 262 GLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSG 321
GL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L +LLVE NFP+I IH G
Sbjct: 260 GLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRG 319
Query: 322 MSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 381
M+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYDMP+ +DTYLHRV RAGR
Sbjct: 320 MAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGR 379
Query: 382 FGTKGLAITFVSSASDSDILNQV 404
FGTKGLAITFVS +D+ ILN V
Sbjct: 380 FGTKGLAITFVSDENDAKILNDV 402
>gi|327265107|ref|XP_003217350.1| PREDICTED: ATP-dependent RNA helicase DDX39-like [Anolis
carolinensis]
Length = 427
Score = 596 bits (1537), Expect = e-168, Method: Compositional matrix adjust.
Identities = 281/383 (73%), Positives = 325/383 (84%)
Query: 22 QAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAI 81
QA + + K YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAI
Sbjct: 20 QAVNDATPVPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAI 79
Query: 82 LGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYL 141
LGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTRELA+QI E+ERFS Y+
Sbjct: 80 LGMDVLCQAKSGMGKTAVFVLATLQQIEPTDGQVSVLVMCHTRELAFQISKEYERFSKYM 139
Query: 142 PDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDK 201
+KV+VF+GG++IK +D+LK CP IVVGTPGRILAL R+K L+L+NV+HF+LDECDK
Sbjct: 140 SAVKVSVFFGGLSIKKDEDVLKKNCPHIVVGTPGRILALVRNKTLNLRNVKHFVLDECDK 199
Query: 202 MLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH 261
MLE LDMRRDVQEIF++TPH+KQ MMFSATLSKEIRPVC+KFMQDPME++VDDE KLTLH
Sbjct: 200 MLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLH 259
Query: 262 GLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSG 321
GL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L +LLVE NFP+I IH G
Sbjct: 260 GLQQYYVKLKDTEKNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRG 319
Query: 322 MSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 381
M+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYDMP+ +DTYLHRV RAGR
Sbjct: 320 MTQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGR 379
Query: 382 FGTKGLAITFVSSASDSDILNQV 404
FGTKGLA+TFVS SD+ ILN V
Sbjct: 380 FGTKGLAVTFVSDESDAKILNDV 402
>gi|426228876|ref|XP_004008522.1| PREDICTED: ATP-dependent RNA helicase DDX39A [Ovis aries]
Length = 427
Score = 596 bits (1536), Expect = e-168, Method: Compositional matrix adjust.
Identities = 277/369 (75%), Positives = 322/369 (87%)
Query: 36 AKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMG 95
K YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAILGMD++CQAKSGMG
Sbjct: 34 VKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDILCQAKSGMG 93
Query: 96 KTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNI 155
KTAVFVL+TLQQ EP GQVT LV+CHTRELA+QI E+ERFS Y+P +KV+VF+GG++I
Sbjct: 94 KTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSI 153
Query: 156 KIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEI 215
K +++LK CP +VVGTPGRILAL R++ L+LKNV+HF+LDECDKMLE LDMRRDVQEI
Sbjct: 154 KKDEEVLKRNCPHVVVGTPGRILALVRNRSLNLKNVKHFVLDECDKMLEQLDMRRDVQEI 213
Query: 216 FKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEK 275
F++TPH+KQ MMFSATLSKEIRPVC+KFMQDPME++VDDE KLTLHGL Q+Y+KL + EK
Sbjct: 214 FRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEK 273
Query: 276 NRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFK 335
NRKL DLLD L+FNQVVIFVKSV R L +LLVE NFP+I IH GM+QEERL+RY+ FK
Sbjct: 274 NRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFK 333
Query: 336 EGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSA 395
+ +RILVAT+L GRG+DIERVNIV NYDMP+ +DTYLHRV RAGRFGTKGLA+TFVS
Sbjct: 334 DFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDE 393
Query: 396 SDSDILNQV 404
+D+ ILN V
Sbjct: 394 NDAKILNDV 402
>gi|213511506|ref|NP_001134851.1| ATP-dependent RNA helicase DDX39 [Salmo salar]
gi|209736554|gb|ACI69146.1| ATP-dependent RNA helicase DDX39 [Salmo salar]
Length = 427
Score = 596 bits (1536), Expect = e-168, Method: Compositional matrix adjust.
Identities = 281/382 (73%), Positives = 326/382 (85%), Gaps = 1/382 (0%)
Query: 23 APDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAIL 82
AP++ A E K YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAIL
Sbjct: 22 APETAAPAGKKEV-KGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAIL 80
Query: 83 GMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLP 142
GMD++CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTRELA+QI E+ERFS Y+P
Sbjct: 81 GMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCHTRELAFQISKEYERFSKYMP 140
Query: 143 DIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKM 202
+K AVF+GG++IK +D+LK CP IVVGTPGRILAL R+K L+LKNV+HF+LDECDKM
Sbjct: 141 TVKAAVFFGGLSIKKDEDVLKKNCPHIVVGTPGRILALIRNKTLNLKNVKHFVLDECDKM 200
Query: 203 LESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHG 262
LE LDMRRDVQ+IF++TPH+KQ MMFSATLSKEIRPVC+KFMQDPME++VDDE KLTLHG
Sbjct: 201 LEQLDMRRDVQDIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHG 260
Query: 263 LVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGM 322
L Q+Y KL + EKNRKL DLLD L+FNQVVIFVKSV R L++LLVE NFP+I IH GM
Sbjct: 261 LQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCVALSQLLVEQNFPAIAIHRGM 320
Query: 323 SQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRF 382
+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYDMP+ +DTYLHRV RAGRF
Sbjct: 321 AQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRF 380
Query: 383 GTKGLAITFVSSASDSDILNQV 404
GTKGLA+TFVS +D+ LN V
Sbjct: 381 GTKGLAVTFVSDETDAKTLNDV 402
>gi|1905998|gb|AAB50231.1| nuclear RNA helicase [Homo sapiens]
Length = 427
Score = 596 bits (1536), Expect = e-168, Method: Compositional matrix adjust.
Identities = 284/400 (71%), Positives = 337/400 (84%), Gaps = 1/400 (0%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDS 64
+ + E++LLDY+EE+ +T A + KG YV IHSSGFRDFLLKPELLRAIVD
Sbjct: 3 EQDVENDLLDYDEEEEPQAPQESTPAPPKKDIKGSYVSIHSSGFRDFLLKPELLRAIVDC 62
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
G EHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQVT LV+CHTR
Sbjct: 63 GLEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTR 122
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDK 184
ELA+QI E+ERFS Y+P +KV+VF+GG++IK ++++K CP +VVGTPGRILAL R++
Sbjct: 123 ELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVMKKNCPHVVVGTPGRILALVRNR 182
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 244
SLKNV+HF+LDECDKMLE LDMRRDVQEIF++TPH+KQ MMFSATLSK+IRPVC+KFM
Sbjct: 183 SFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCRKFM 242
Query: 245 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 304
QDPME++VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQV+IFVKSV R L
Sbjct: 243 QDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVIIFVKSVQRCMAL 302
Query: 305 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 364
+LLVE NFP+I IH GM+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYD
Sbjct: 303 AQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYD 362
Query: 365 MPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
MP+ +DTYLHRV R GRFGTKGLAITFVS +D+ ILN V
Sbjct: 363 MPEDSDTYLHRVARGGRFGTKGLAITFVSDENDAKILNHV 402
>gi|19115173|ref|NP_594261.1| ATP-dependent RNA helicase Uap56 [Schizosaccharomyces pombe 972h-]
gi|59800426|sp|O13792.3|SUB2_SCHPO RecName: Full=ATP-dependent RNA helicase uap56
gi|2408027|emb|CAB16225.1| ATP-dependent RNA helicase Uap56 [Schizosaccharomyces pombe]
Length = 434
Score = 595 bits (1535), Expect = e-167, Method: Compositional matrix adjust.
Identities = 289/409 (70%), Positives = 339/409 (82%), Gaps = 12/409 (2%)
Query: 10 EDELLDYEEEDAQAPDSVA--------TKANGEAA-KKG-YVGIHSSGFRDFLLKPELLR 59
+++L+DYEEE+ D A T NGE + KKG YVGIHS+GFRDFLLKPELLR
Sbjct: 5 QEDLIDYEEEEELVQDQPAQEITPAADTAENGEKSDKKGSYVGIHSTGFRDFLLKPELLR 64
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
AI DSGFEHPSEVQ CIPQ+ILG DV+CQAKSGMGKTAVFVLSTLQQ EP G+V+ LV
Sbjct: 65 AITDSGFEHPSEVQQVCIPQSILGTDVLCQAKSGMGKTAVFVLSTLQQIEPVDGEVSVLV 124
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNEC--PQIVVGTPGRI 177
LCHTRELA+QI +E+ RFS YLPD++ AVFYGG+NIK + K++ P IVV TPGR+
Sbjct: 125 LCHTRELAFQIKNEYARFSKYLPDVRTAVFYGGINIKQDMEAFKDKSKSPHIVVATPGRL 184
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
AL R+K L + +V+HF+LDECDK+LES+DMRRD+QE+F+ TP KQVMMFSATLS EIR
Sbjct: 185 NALVREKILKVNSVKHFVLDECDKLLESVDMRRDIQEVFRATPPQKQVMMFSATLSNEIR 244
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 297
P+CKKFMQ+P+EIYVDDE KLTLHGL QHY+KL E KNRK+NDLLD+L+FNQVVIFVKS
Sbjct: 245 PICKKFMQNPLEIYVDDETKLTLHGLQQHYVKLEEKAKNRKINDLLDSLEFNQVVIFVKS 304
Query: 298 VSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERV 357
VSRA EL++LL ECNFPSICIH G+ QEER+ RYK FK+ +KRI VATD+ GRGIDIERV
Sbjct: 305 VSRANELDRLLRECNFPSICIHGGLPQEERIKRYKAFKDFDKRICVATDVFGRGIDIERV 364
Query: 358 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
NIVINYDMPDS D+YLHRVGRAGRFGTKGLAITF SS DS IL+++ +
Sbjct: 365 NIVINYDMPDSPDSYLHRVGRAGRFGTKGLAITFSSSEEDSQILDKIQE 413
>gi|405952464|gb|EKC20273.1| Spliceosome RNA helicase BAT1 [Crassostrea gigas]
Length = 486
Score = 595 bits (1535), Expect = e-167, Method: Compositional matrix adjust.
Identities = 285/402 (70%), Positives = 335/402 (83%), Gaps = 1/402 (0%)
Query: 6 DNEYEDELLDYEEEDAQA-PDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDS 64
DNE E ELLDYE+++ + D + K YV IHSSGFRDFLLKPELLRAIVD
Sbjct: 3 DNENETELLDYEDDETETTADGTGDAPVKKDVKGTYVSIHSSGFRDFLLKPELLRAIVDC 62
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFEHPSEVQHECIPQAIL MDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LVL HTR
Sbjct: 63 GFEHPSEVQHECIPQAILSMDVLCQAKSGMGKTAVFVLATLQQLEPVDGQVSVLVLAHTR 122
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDK 184
ELA+QI E+ERFS Y+ ++K+AVF+GG++IK +D+LK CP I+VGTPGRILAL K
Sbjct: 123 ELAFQISKEYERFSKYMNNVKIAVFFGGMSIKKDEDVLKKNCPHIIVGTPGRILALCHSK 182
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 244
L+LKNV+HF+LDECDKML +LDMRRDVQEIF+ TPH+KQVMMFSATLSKEIR VCK+FM
Sbjct: 183 VLNLKNVKHFVLDECDKMLAALDMRRDVQEIFRNTPHEKQVMMFSATLSKEIRAVCKRFM 242
Query: 245 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 304
QDPME+YVDD++KLTLHGL QHY+KL + EKNRKL +LLD L+FNQV+IFVKSV R L
Sbjct: 243 QDPMEVYVDDDSKLTLHGLQQHYVKLKDNEKNRKLFELLDVLEFNQVIIFVKSVQRCMAL 302
Query: 305 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 364
+LLVE NFP+I IH M+QEERL+RY+ FK+ KRILVAT+L GRG+DIERVNIV NYD
Sbjct: 303 AQLLVEQNFPAIAIHRAMTQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYD 362
Query: 365 MPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
MP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ +LN+V +
Sbjct: 363 MPEDSDTYLHRVARAGRFGTKGLAITFVSDETDAKVLNEVQE 404
>gi|77736449|ref|NP_001029924.1| ATP-dependent RNA helicase DDX39A [Bos taurus]
gi|59858465|gb|AAX09067.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 isoform 1 [Bos taurus]
gi|296485978|tpg|DAA28093.1| TPA: DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 [Bos taurus]
Length = 427
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 276/369 (74%), Positives = 322/369 (87%)
Query: 36 AKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMG 95
K YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAILGMD++CQAKSGMG
Sbjct: 34 VKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDILCQAKSGMG 93
Query: 96 KTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNI 155
KTAVFVL+TLQQ EP GQVT LV+CHTRELA+QI E+ERFS Y+P +KV+VF+GG++I
Sbjct: 94 KTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSI 153
Query: 156 KIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEI 215
K +++LK CP +VVGTPGRILAL R++ L+L+NV+HF+LDECDKMLE LDMRRDVQEI
Sbjct: 154 KKDEEVLKRNCPHVVVGTPGRILALVRNRSLNLRNVKHFVLDECDKMLEQLDMRRDVQEI 213
Query: 216 FKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEK 275
F++TPH+KQ MMFSATLSKEIRPVC+KFMQDPME++VDDE KLTLHGL Q+Y+KL + EK
Sbjct: 214 FRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEK 273
Query: 276 NRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFK 335
NRKL DLLD L+FNQVVIFVKSV R L +LLVE NFP+I IH GM+QEERL+RY+ FK
Sbjct: 274 NRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFK 333
Query: 336 EGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSA 395
+ +RILVAT+L GRG+DIERVNIV NYDMP+ +DTYLHRV RAGRFGTKGLA+TFVS
Sbjct: 334 DFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDE 393
Query: 396 SDSDILNQV 404
+D+ ILN V
Sbjct: 394 NDAKILNDV 402
>gi|403302191|ref|XP_003941746.1| PREDICTED: ATP-dependent RNA helicase DDX39A isoform 1 [Saimiri
boliviensis boliviensis]
Length = 427
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 280/378 (74%), Positives = 325/378 (85%), Gaps = 1/378 (0%)
Query: 28 ATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDV 86
+T A + KG YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAILGMDV
Sbjct: 25 STPAPAKKDMKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDV 84
Query: 87 ICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKV 146
+CQAKSGMGKTAVFVL+TLQQ EP GQVT LV+CHTRELA+QI E+ERFS Y+P +KV
Sbjct: 85 LCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKV 144
Query: 147 AVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESL 206
+VF+GG++IK +++LK CP +VVGTPGRILAL R++ SLKNV+HF+LDECDKMLE L
Sbjct: 145 SVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNRSFSLKNVKHFVLDECDKMLEQL 204
Query: 207 DMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQH 266
DMRRDVQEIF++TPH+KQ MMFSATLSK+IRPVC+KFMQDPME++VDDE KLTLHGL QH
Sbjct: 205 DMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCRKFMQDPMEVFVDDETKLTLHGLQQH 264
Query: 267 YIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEE 326
Y+KL + EKNRKL DLLD L+FNQV+IFVKSV R L +LLVE NFP+I IH GM+QEE
Sbjct: 265 YVKLRDSEKNRKLFDLLDVLEFNQVIIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEE 324
Query: 327 RLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKG 386
RL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYDMP+ +DTYLHRV RAGRFGTKG
Sbjct: 325 RLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKG 384
Query: 387 LAITFVSSASDSDILNQV 404
LAITFVS +D+ LN V
Sbjct: 385 LAITFVSDENDAKTLNDV 402
>gi|213514236|ref|NP_001133080.1| ATP-dependent RNA helicase DDX39 [Salmo salar]
gi|197631861|gb|ACH70654.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 [Salmo salar]
Length = 427
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 281/382 (73%), Positives = 326/382 (85%), Gaps = 1/382 (0%)
Query: 23 APDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAIL 82
AP++ A E K YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAIL
Sbjct: 22 APETAAPAGKKEV-KGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAIL 80
Query: 83 GMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLP 142
GMD++CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTRELA+QI E+ERFS Y+P
Sbjct: 81 GMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCHTRELAFQISKEYERFSKYMP 140
Query: 143 DIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKM 202
+K AVF+GG++IK +D+LK CP IVVGTPGRILAL R+K L+LKNV+HF+LDECDKM
Sbjct: 141 TVKAAVFFGGLSIKKDEDVLKKNCPHIVVGTPGRILALIRNKTLNLKNVKHFVLDECDKM 200
Query: 203 LESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHG 262
LE LDMRRDVQ+IF++TPH+KQ MMFSATLSKEIRPVC+KFMQDPME++VDDE KLTLHG
Sbjct: 201 LEQLDMRRDVQDIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHG 260
Query: 263 LVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGM 322
L Q+Y KL + EKNRKL DLLD L+FNQVVIFVKSV R L++LLVE NFP+I IH GM
Sbjct: 261 LQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCVALSQLLVEQNFPAIAIHRGM 320
Query: 323 SQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRF 382
+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYDMP+ +DTYLHRV RAGRF
Sbjct: 321 AQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRF 380
Query: 383 GTKGLAITFVSSASDSDILNQV 404
GTKGLA+TFVS +D+ LN V
Sbjct: 381 GTKGLAVTFVSDETDAKTLNDV 402
>gi|410917332|ref|XP_003972140.1| PREDICTED: ATP-dependent RNA helicase DDX39A-like [Takifugu
rubripes]
Length = 427
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 281/382 (73%), Positives = 326/382 (85%), Gaps = 1/382 (0%)
Query: 23 APDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAIL 82
AP+S T AN + K YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAIL
Sbjct: 22 APES-GTPANKKEVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAIL 80
Query: 83 GMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLP 142
GMD++CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTRELA+QI E+ERFS Y+P
Sbjct: 81 GMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCHTRELAFQISKEYERFSKYMP 140
Query: 143 DIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKM 202
+KV+VF+GG+ IK +++LK CP I+VGTPGRI AL K LSLKN++HF+LDECDKM
Sbjct: 141 TVKVSVFFGGLTIKKDEEVLKKNCPHIIVGTPGRIRALILQKSLSLKNIKHFVLDECDKM 200
Query: 203 LESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHG 262
LE LDMR DVQEIF+MTPH+KQVMMFSATLSKE+RPVC+KFMQDPME++VDDE KLTLHG
Sbjct: 201 LEQLDMRGDVQEIFRMTPHEKQVMMFSATLSKEVRPVCRKFMQDPMEVFVDDETKLTLHG 260
Query: 263 LVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGM 322
L Q+Y KL + EKNRKL DLLD L+FNQVVIFVK+V R L++LLVE NFP+I IH GM
Sbjct: 261 LQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKTVQRCVALSQLLVEQNFPAIAIHRGM 320
Query: 323 SQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRF 382
+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYDMP+ +DTYLHRV RAGRF
Sbjct: 321 AQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRF 380
Query: 383 GTKGLAITFVSSASDSDILNQV 404
GTKGLAITFVS +D+ ILN V
Sbjct: 381 GTKGLAITFVSDENDAKILNDV 402
>gi|348552098|ref|XP_003461865.1| PREDICTED: ATP-dependent RNA helicase DDX39A [Cavia porcellus]
Length = 427
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 279/383 (72%), Positives = 325/383 (84%)
Query: 22 QAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAI 81
QAP + K YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAI
Sbjct: 20 QAPAESTPVLPKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAI 79
Query: 82 LGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYL 141
LGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTRELA+QI E+ERFS Y+
Sbjct: 80 LGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVSVLVMCHTRELAFQISKEYERFSKYM 139
Query: 142 PDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDK 201
P +KV+VF+GG++IK +++LK CP +VVGTPGRILAL R++ L+LKNV+HF+LDECDK
Sbjct: 140 PSVKVSVFFGGLSIKKDEEVLKRNCPHVVVGTPGRILALVRNRSLNLKNVKHFVLDECDK 199
Query: 202 MLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH 261
MLE LDMRRDVQEIF++TPH+KQ MMFSATL KE+RPVC+KFMQDPME++VDDE KLTLH
Sbjct: 200 MLEQLDMRRDVQEIFRLTPHEKQCMMFSATLGKEVRPVCRKFMQDPMEVFVDDETKLTLH 259
Query: 262 GLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSG 321
GL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L +LLVE NFP+I IH G
Sbjct: 260 GLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRG 319
Query: 322 MSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 381
M+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYDMP+ +DTYLHRV RAGR
Sbjct: 320 MAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGR 379
Query: 382 FGTKGLAITFVSSASDSDILNQV 404
FGTKGLAITFVS +D+ ILN V
Sbjct: 380 FGTKGLAITFVSDENDAKILNDV 402
>gi|147769174|emb|CAN76234.1| hypothetical protein VITISV_030204 [Vitis vinifera]
Length = 383
Score = 593 bits (1529), Expect = e-167, Method: Compositional matrix adjust.
Identities = 306/334 (91%), Positives = 316/334 (94%), Gaps = 5/334 (1%)
Query: 1 MGETRDNE-YEDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLR 59
MGE RDN+ YE+ELLDYEEED +APDSVA+KA GE+AKKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1 MGEARDNDAYEEELLDYEEEDEKAPDSVASKAAGESAKKGYVGIHSSGFRDFLLKPELLR 60
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
+IVDSGFEHPSE +CIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ EP GQV ALV
Sbjct: 61 SIVDSGFEHPSE--GKCIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVAGQVAALV 118
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA 179
LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGV+IK HKDLLKNECP IVVGTPGRILA
Sbjct: 119 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVSIKTHKDLLKNECPHIVVGTPGRILA 178
Query: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
LARDKDL LK+VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 179 LARDKDLGLKHVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 238
Query: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 299
CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS
Sbjct: 239 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 298
Query: 300 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKG 333
RAAELNKLL+ECNFPSICIHSGM QEE L YKG
Sbjct: 299 RAAELNKLLMECNFPSICIHSGMPQEESL--YKG 330
>gi|225707666|gb|ACO09679.1| ATP-dependent RNA helicase DDX39 [Osmerus mordax]
Length = 427
Score = 593 bits (1528), Expect = e-167, Method: Compositional matrix adjust.
Identities = 278/383 (72%), Positives = 324/383 (84%)
Query: 22 QAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAI 81
Q A A + K YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAI
Sbjct: 20 QVASESAVPAGKKEVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAI 79
Query: 82 LGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYL 141
LGMD++CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTRELA+QI E+ERFS Y+
Sbjct: 80 LGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCHTRELAFQISKEYERFSKYM 139
Query: 142 PDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDK 201
P +K AVF+GG+ IK +++LK CP IVVGTPGRILAL+R+K LSLKN +HF+LDECDK
Sbjct: 140 PTVKAAVFFGGMAIKKDEEVLKKSCPHIVVGTPGRILALSRNKTLSLKNAKHFVLDECDK 199
Query: 202 MLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH 261
MLE+LDMRRDVQ+IF++TPH+KQ MMFSATLSK+IRPVC+KFMQDPME++VDDE KLTLH
Sbjct: 200 MLEALDMRRDVQDIFRLTPHEKQCMMFSATLSKDIRPVCRKFMQDPMEVFVDDETKLTLH 259
Query: 262 GLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSG 321
GL Q+Y KL + EKNRKL DLLD L+FNQVVIFVKSV R L++LLVE NFP+I IH G
Sbjct: 260 GLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCVALSQLLVEQNFPAIAIHRG 319
Query: 322 MSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 381
M+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYDMP+ +DTYLHRV RAGR
Sbjct: 320 MNQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGR 379
Query: 382 FGTKGLAITFVSSASDSDILNQV 404
FGTKGLA+TFVS +D+ LN V
Sbjct: 380 FGTKGLAVTFVSDETDAKTLNDV 402
>gi|47940414|gb|AAH71505.1| Ddx39a protein [Danio rerio]
Length = 427
Score = 593 bits (1528), Expect = e-167, Method: Compositional matrix adjust.
Identities = 280/380 (73%), Positives = 325/380 (85%), Gaps = 1/380 (0%)
Query: 25 DSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGM 84
DS AT E K YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAILGM
Sbjct: 24 DSGATTGKKEV-KGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGM 82
Query: 85 DVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDI 144
D++CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTRELA+QI E+ERFS Y+ +
Sbjct: 83 DILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCHTRELAFQISKEYERFSKYMSSV 142
Query: 145 KVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLE 204
K A F+GG++IK +D+LK CP IVVGTPGRILAL+R+K L+LKNV+HF+LDECDKMLE
Sbjct: 143 KCAAFFGGMSIKKDEDVLKKNCPHIVVGTPGRILALSRNKTLTLKNVKHFVLDECDKMLE 202
Query: 205 SLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLV 264
LDMRRDVQ+IF++TPH+KQ MMFSATLSKEIRPVC+KFMQDPME++VDDE KLTLHGL
Sbjct: 203 QLDMRRDVQDIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQ 262
Query: 265 QHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQ 324
Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L++LLVE NFP+I IH GM+Q
Sbjct: 263 QYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVPRCVALSQLLVEQNFPAIAIHRGMTQ 322
Query: 325 EERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGT 384
EERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYDMP+ +DTYLHRV RAGRFGT
Sbjct: 323 EERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGT 382
Query: 385 KGLAITFVSSASDSDILNQV 404
KGLA+ FVS +D+ ILN V
Sbjct: 383 KGLAVIFVSDETDAKILNDV 402
>gi|148228466|ref|NP_001087845.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B [Xenopus laevis]
gi|51950262|gb|AAH82368.1| MGC81606 protein [Xenopus laevis]
Length = 428
Score = 592 bits (1527), Expect = e-167, Method: Compositional matrix adjust.
Identities = 296/410 (72%), Positives = 341/410 (83%), Gaps = 13/410 (3%)
Query: 1 MGETRDNEYEDELLDYEEEDAQ------APDSVATKANGEAAKKGYVGIHSSGFRDFLLK 54
M ET + ++ELLDYE++D APD K K YV IHSSGFRDFLLK
Sbjct: 1 MAET---DVDNELLDYEDDDVDNQAGVDAPDITVKKE----MKGSYVSIHSSGFRDFLLK 53
Query: 55 PELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQ 114
PELLRAIVD GFEHPSEVQHECIPQAILGMD++CQAKSGMGKTAVFVL+TLQQ EP GQ
Sbjct: 54 PELLRAIVDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQLEPVTGQ 113
Query: 115 VTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTP 174
V+ LV+CHTRELA+QI E+ERFS Y+P +KVAVF+GG+ IK +++LK CP IVVGTP
Sbjct: 114 VSVLVMCHTRELAFQISKEYERFSKYMPSVKVAVFFGGLAIKKDEEVLKKSCPHIVVGTP 173
Query: 175 GRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSK 234
GR+LALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSK
Sbjct: 174 GRMLALARNKTLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSK 233
Query: 235 EIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIF 294
EIRPVC+KFMQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIF
Sbjct: 234 EIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDLLEFNQVVIF 293
Query: 295 VKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDI 354
VKSV R L +LLVE NFP+I IH GMSQEERL+RY+ FK+ +RILVAT+L GRG+DI
Sbjct: 294 VKSVQRCIALAQLLVEQNFPAIAIHRGMSQEERLSRYQQFKDFQRRILVATNLFGRGMDI 353
Query: 355 ERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
ERVNI NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS D+ ILN+V
Sbjct: 354 ERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEGDAKILNEV 403
>gi|291237406|ref|XP_002738626.1| PREDICTED: HLA-B associated transcript 1-like [Saccoglossus
kowalevskii]
Length = 429
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 284/380 (74%), Positives = 321/380 (84%)
Query: 36 AKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMG 95
K YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAIL MDV+CQAKSGMG
Sbjct: 37 VKGNYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILSMDVLCQAKSGMG 96
Query: 96 KTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNI 155
KTAVFVL+TLQQ EP GQV+ LVLCHTRELA+QI E+ERFS Y+P IKV VF+GG+NI
Sbjct: 97 KTAVFVLATLQQIEPVDGQVSVLVLCHTRELAFQIAKEYERFSKYMPTIKVGVFFGGINI 156
Query: 156 KIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEI 215
K + LKN CP IVVGTPGR+LAL R+K LSLK+V+HFILDECDKMLE LDMRRDVQ+I
Sbjct: 157 KKDEQTLKNNCPHIVVGTPGRLLALGRNKTLSLKHVKHFILDECDKMLEQLDMRRDVQDI 216
Query: 216 FKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEK 275
F+ TPH+KQVMMFSATLSK+IRP+CKKFMQDPME+YVDDE KLTLHGL Q+Y KL + EK
Sbjct: 217 FRQTPHEKQVMMFSATLSKDIRPICKKFMQDPMEVYVDDETKLTLHGLQQYYCKLKDNEK 276
Query: 276 NRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFK 335
NRKL DLLD L+FNQVVIFVKSV R L++LLVE NFP+I IH M+QEERL RY+ FK
Sbjct: 277 NRKLFDLLDVLEFNQVVIFVKSVQRCIALSQLLVEQNFPAIAIHRAMNQEERLARYQQFK 336
Query: 336 EGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSA 395
+ KRILVAT+L GRG+DIERVNIV NYDMP+ ++TYLHRV RAGRFGTKGLAITFVS
Sbjct: 337 DFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSNTYLHRVARAGRFGTKGLAITFVSDE 396
Query: 396 SDSDILNQVSKFMFLLIGSF 415
+D+ ILN+V + IG
Sbjct: 397 NDAKILNEVQDRFEVNIGEL 416
>gi|432089424|gb|ELK23366.1| Spliceosome RNA helicase DDX39B [Myotis davidii]
Length = 469
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 296/450 (65%), Positives = 342/450 (76%), Gaps = 57/450 (12%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPEL 57
+N+ ++ELLDYE+ D V T A G+ A K YV IHSSGFRDFLLKPEL
Sbjct: 3 ENDVDNELLDYED------DEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPEL 56
Query: 58 LRAIVDSGFEHPSEVQ-------------------------------------------H 74
LRAIVD GFEHPSEVQ H
Sbjct: 57 LRAIVDCGFEHPSEVQEPMGDVGLLQRQERLLPLLLLLLSSLVNPESGFWLSGAPSSVQH 116
Query: 75 ECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEF 134
ECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTRELA+QI E+
Sbjct: 117 ECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEY 176
Query: 135 ERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHF 194
ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRILALAR+K L+LK+++HF
Sbjct: 177 ERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHF 236
Query: 195 ILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDD 254
ILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIRPVC+KFMQDPMEI+VDD
Sbjct: 237 ILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDD 296
Query: 255 EAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFP 314
E KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L +LLVE NFP
Sbjct: 297 ETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFP 356
Query: 315 SICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLH 374
+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNI NYDMP+ +DTYLH
Sbjct: 357 AIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLH 416
Query: 375 RVGRAGRFGTKGLAITFVSSASDSDILNQV 404
RV RAGRFGTKGLAITFVS +D+ ILN V
Sbjct: 417 RVARAGRFGTKGLAITFVSDENDAKILNDV 446
>gi|45360797|ref|NP_989072.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B [Xenopus (Silurana)
tropicalis]
gi|38174030|gb|AAH61280.1| HLA-B associated transcript 1 [Xenopus (Silurana) tropicalis]
Length = 428
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 295/410 (71%), Positives = 341/410 (83%), Gaps = 13/410 (3%)
Query: 1 MGETRDNEYEDELLDYEEEDAQ------APDSVATKANGEAAKKGYVGIHSSGFRDFLLK 54
M ET + ++ELLDYE+++ APD K K YV IHSSGFRDFLLK
Sbjct: 1 MAET---DVDNELLDYEDDEVDNQAGVDAPDITVKKE----MKGSYVSIHSSGFRDFLLK 53
Query: 55 PELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQ 114
PELLRAIVD GFEHPSEVQHECIPQAILGMD++CQAKSGMGKTAVFVL+TLQQ EP GQ
Sbjct: 54 PELLRAIVDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQLEPVTGQ 113
Query: 115 VTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTP 174
V+ LV+CHTRELA+QI E+ERFS Y+P +KVAVF+GG+ IK +++LK CP IVVGTP
Sbjct: 114 VSVLVMCHTRELAFQISKEYERFSKYMPSVKVAVFFGGLAIKKDEEVLKKSCPHIVVGTP 173
Query: 175 GRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSK 234
GR+LALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSK
Sbjct: 174 GRMLALARNKTLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSK 233
Query: 235 EIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIF 294
EIRPVC+KFMQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIF
Sbjct: 234 EIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDLLEFNQVVIF 293
Query: 295 VKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDI 354
VKSV R L +LLVE NFP+I IH GMSQEERL+RY+ FK+ +RILVAT+L GRG+DI
Sbjct: 294 VKSVQRCIALAQLLVEQNFPAIAIHRGMSQEERLSRYQQFKDFQRRILVATNLFGRGMDI 353
Query: 355 ERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
ERVNI NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS D+ ILN+V
Sbjct: 354 ERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEGDAKILNEV 403
>gi|331227385|ref|XP_003326361.1| ATP-dependent RNA helicase uap56 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309305351|gb|EFP81942.1| ATP-dependent RNA helicase uap56 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 433
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 287/412 (69%), Positives = 336/412 (81%), Gaps = 12/412 (2%)
Query: 8 EYEDELLDYEEEDAQ-APDSVATKA--------NGEAAKKGYVGIHSSGFRDFLLKPELL 58
E+ ++L+DY+E+DA AP + T NG+ K YVGIHS+GFRDFLLKPELL
Sbjct: 3 EHAEDLIDYDEDDAGVAPSAAVTSTTNGAAAPLNGKDQKGSYVGIHSTGFRDFLLKPELL 62
Query: 59 RAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTAL 118
RAI D GFEHPSEVQ ECIPQAILGMDV+CQAKSGMGKTAVFV +TLQQ +P G+V+ L
Sbjct: 63 RAISDLGFEHPSEVQQECIPQAILGMDVLCQAKSGMGKTAVFVTATLQQMDPKEGEVSML 122
Query: 119 VLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK--NECPQIVVGTPGR 176
VLCHTRELAYQI +E+ RFS Y+PDI+ AV YGG+ IK ++LK ++CP I+VGTPGR
Sbjct: 123 VLCHTRELAYQIKNEYARFSKYMPDIRTAVVYGGIPIKQDAEMLKAKDKCPHILVGTPGR 182
Query: 177 ILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEI 236
+ AL RD L VR F+LDECDKMLES+DMRRDVQ++F TPH KQVMMFSATLSKEI
Sbjct: 183 LNALVRDGLLKCNTVRTFVLDECDKMLESVDMRRDVQQVFLATPHAKQVMMFSATLSKEI 242
Query: 237 RPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVK 296
RPVCKKFMQ+P+EIYVDDEAKLTLHGL QH++K+ E KNRKLNDLLD L+FNQV IFVK
Sbjct: 243 RPVCKKFMQNPLEIYVDDEAKLTLHGLQQHFVKIDEAAKNRKLNDLLDTLEFNQVCIFVK 302
Query: 297 SVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIER 356
SVSRA +L++LL +CNFPSI IHSG+ QEER+ RYK FK KRILVATD+ GRGID+ER
Sbjct: 303 SVSRAVQLDQLLRDCNFPSIAIHSGLGQEERIDRYKQFKAFEKRILVATDIFGRGIDVER 362
Query: 357 VNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV-SKF 407
VNIVINYD P AD+YLHRVGRAGRFGTKGLAITFVSS +D +L+ + S+F
Sbjct: 363 VNIVINYDTPGEADSYLHRVGRAGRFGTKGLAITFVSSEADQTVLDAIQSRF 414
>gi|213409820|ref|XP_002175680.1| ATP-dependent RNA helicase Uap56 [Schizosaccharomyces japonicus
yFS275]
gi|212003727|gb|EEB09387.1| ATP-dependent RNA helicase Uap56 [Schizosaccharomyces japonicus
yFS275]
Length = 434
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 283/409 (69%), Positives = 340/409 (83%), Gaps = 12/409 (2%)
Query: 10 EDELLDYEEED---------AQAPDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLR 59
+++L+DYEEE+ Q + +T++ +A KKG YVGIHS+GFRDFLLKPELLR
Sbjct: 5 QEDLIDYEEEEELTQVDNTAGQTAAAESTESAEKADKKGSYVGIHSTGFRDFLLKPELLR 64
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
AI DSGFEHPSEVQ CIPQ+ILG DV+CQAKSGMGKTAVFVLSTLQQ EP G+V+ LV
Sbjct: 65 AITDSGFEHPSEVQQVCIPQSILGTDVLCQAKSGMGKTAVFVLSTLQQIEPVDGEVSVLV 124
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRI 177
LCHTRELA+QI +E+ RFS YLPD++ AVFYGGVNIK + K++ P IVV TPGR+
Sbjct: 125 LCHTRELAFQIKNEYARFSKYLPDVRTAVFYGGVNIKQDMEAFKDKSTSPHIVVATPGRL 184
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
AL R+K L + NV+HF+LDECDK+LE++DMRRD+QE+F+ TP KQVMMFSATLS EIR
Sbjct: 185 NALVREKILRVNNVKHFVLDECDKLLEAVDMRRDIQEVFRATPPQKQVMMFSATLSNEIR 244
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 297
P+CKKFMQ+P+EIYVDDE KLTLHGL QHY+KL E KNRKLNDLLD+L+FNQVVIFVKS
Sbjct: 245 PICKKFMQNPLEIYVDDETKLTLHGLQQHYVKLDEKAKNRKLNDLLDSLEFNQVVIFVKS 304
Query: 298 VSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERV 357
VSRA L++LL EC+FPSICIH G+ Q+ER+ RYK FK+ +KRI VATD+ GRGIDIERV
Sbjct: 305 VSRANALDRLLRECSFPSICIHGGLPQDERIKRYKAFKDFDKRICVATDVFGRGIDIERV 364
Query: 358 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
NIVINYDMPDS D+YLHRVGRAGRFGTKGLAITFV++ DS +L+++ +
Sbjct: 365 NIVINYDMPDSPDSYLHRVGRAGRFGTKGLAITFVTTDEDSQVLDKIQE 413
>gi|290462501|gb|ADD24298.1| Spliceosome RNA helicase BAT1 [Lepeophtheirus salmonis]
gi|290562772|gb|ADD38781.1| Spliceosome RNA helicase BAT1 [Lepeophtheirus salmonis]
Length = 426
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 292/400 (73%), Positives = 329/400 (82%), Gaps = 3/400 (0%)
Query: 8 EYEDELLDYEEEDAQAPDSVATKANGEAAK--KG-YVGIHSSGFRDFLLKPELLRAIVDS 64
E E +LLDYEEED E K KG YV IHSSGFRDFLLKPE+LRAI D
Sbjct: 3 EVEADLLDYEEEDTTTTAVTTETNGAEHKKEVKGTYVSIHSSGFRDFLLKPEILRAIGDC 62
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFEHPSEVQHECIPQA+LGMD++ QAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTR
Sbjct: 63 GFEHPSEVQHECIPQAVLGMDILSQAKSGMGKTAVFVLATLQQMEPVDGQVSVLVMCHTR 122
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDK 184
ELA+QI E+ERFS YLP IKV VF+GG+ I + +LK+ CP IVVGTPGRILAL R K
Sbjct: 123 ELAFQISKEYERFSKYLPGIKVGVFFGGLAISKDEQVLKSNCPHIVVGTPGRILALVRSK 182
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 244
L+LK+ +HFILDECDKMLE LDMRRDVQEIF+ TPH+KQVMMFSATLSKE+RPVCKKFM
Sbjct: 183 KLNLKHTKHFILDECDKMLEQLDMRRDVQEIFRNTPHEKQVMMFSATLSKEVRPVCKKFM 242
Query: 245 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 304
QDPME+YVDDEAKLTLHGL QHY+KL + EKNRKL +LLD L+FNQVVIFVKSV R L
Sbjct: 243 QDPMEVYVDDEAKLTLHGLQQHYVKLKDTEKNRKLFELLDVLEFNQVVIFVKSVQRCVAL 302
Query: 305 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 364
+LL+E NFP+I IH GMSQEERL+RY+ FK+ KRILVAT+L GRG+DIERVNIV NYD
Sbjct: 303 AQLLIEQNFPAIAIHRGMSQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYD 362
Query: 365 MPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
MP+ DTYLHRV RAGRFGTKGLAITFVS SD+ LN+V
Sbjct: 363 MPEDTDTYLHRVARAGRFGTKGLAITFVSDESDAKTLNEV 402
>gi|283854611|gb|ADB44901.1| DEAD(Asp-Glu-Ala-Asp) box polypeptide 39 [Macrobrachium nipponense]
Length = 432
Score = 590 bits (1521), Expect = e-166, Method: Compositional matrix adjust.
Identities = 275/370 (74%), Positives = 320/370 (86%)
Query: 37 KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGK 96
K YV IHSSGFRDFLLKPE+LRAIVD GFEHPSEVQHECIPQA+LGMD++CQAKSGMGK
Sbjct: 41 KGTYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGK 100
Query: 97 TAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIK 156
TAVFVL+TLQQ +P GQV+ LV+CHTRELAYQI E+ERF+ Y+P++KV VF+GG+N+
Sbjct: 101 TAVFVLATLQQIDPVDGQVSVLVMCHTRELAYQIAKEYERFTKYMPNVKVGVFFGGMNVS 160
Query: 157 IHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIF 216
++ LK+ CP IVVGTPGR+LAL R K L+LKN++HF+LDECDKML LDMRRDVQEIF
Sbjct: 161 KDEETLKSNCPHIVVGTPGRLLALIRGKKLNLKNLKHFVLDECDKMLVQLDMRRDVQEIF 220
Query: 217 KMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKN 276
+ TPH+KQVMMFSATLSKEIRPVCKKFMQDPME+YVDDEAKLTLHGL QHY+K+ E EKN
Sbjct: 221 RNTPHEKQVMMFSATLSKEIRPVCKKFMQDPMEVYVDDEAKLTLHGLQQHYVKIKENEKN 280
Query: 277 RKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKE 336
RKL +LLDAL+FNQVVIFVKSV R L +LLVE NFP++ IH M QEERL+RY+ FK+
Sbjct: 281 RKLFELLDALEFNQVVIFVKSVQRCMALAQLLVEQNFPAVAIHRAMGQEERLSRYQQFKD 340
Query: 337 GNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAS 396
KRILVAT+L GRG+DIERVNIV NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +
Sbjct: 341 FQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSEEA 400
Query: 397 DSDILNQVSK 406
D+ +LN V +
Sbjct: 401 DAKVLNDVQE 410
>gi|321453633|gb|EFX64849.1| hypothetical protein DAPPUDRAFT_219465 [Daphnia pulex]
Length = 425
Score = 590 bits (1520), Expect = e-166, Method: Compositional matrix adjust.
Identities = 287/406 (70%), Positives = 335/406 (82%), Gaps = 10/406 (2%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAAKK-----GYVGIHSSGFRDFLLKPELLRA 60
DNE +LLDYE+E +A + VA + G+A K YV IHSSGFRDFLLKPE+LRA
Sbjct: 3 DNE---DLLDYEDE--EATEQVAVEGAGDAPAKKEVKGTYVSIHSSGFRDFLLKPEILRA 57
Query: 61 IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVL 120
IVD GFEHPSEVQHECIPQA+LGMDV+CQAKSGMGKTAVFVL+TLQQ E QV+ LVL
Sbjct: 58 IVDCGFEHPSEVQHECIPQAVLGMDVLCQAKSGMGKTAVFVLATLQQLEMVENQVSVLVL 117
Query: 121 CHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILAL 180
CHTRELA+QI E+ERFS Y+ IKV VF+GG+NI + LK+ CP IVVGTPGRILAL
Sbjct: 118 CHTRELAFQISKEYERFSKYMTTIKVGVFFGGLNIAKDEQTLKSNCPHIVVGTPGRILAL 177
Query: 181 ARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
R K L+L+ ++HF+LDECDKMLE+LDMRRDVQEIF+ TPH+KQVMMFSATLSKEIRPVC
Sbjct: 178 VRSKKLNLRTLKHFVLDECDKMLEALDMRRDVQEIFRNTPHEKQVMMFSATLSKEIRPVC 237
Query: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSR 300
KKFMQDPME+YVDDE+KLTLHGL QHY+KL + EKNRKL +LLD L+FNQVVIFVKS+ R
Sbjct: 238 KKFMQDPMEVYVDDESKLTLHGLQQHYVKLKDNEKNRKLFELLDVLEFNQVVIFVKSIQR 297
Query: 301 AAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIV 360
L +LL E NFP+I IH M+QEERL+RY+ FK+ KRILVATDL GRG+DIERVNIV
Sbjct: 298 CMALCQLLGEQNFPAIAIHRSMTQEERLSRYQQFKDFKKRILVATDLFGRGMDIERVNIV 357
Query: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
NYDMP+++D+YLHRV RAGRFGTKGL ITFVS +D+ +LN V +
Sbjct: 358 FNYDMPENSDSYLHRVARAGRFGTKGLGITFVSDENDAKVLNDVQE 403
>gi|60594464|pdb|1XTI|A Chain A, Structure Of Wildtype Human Uap56
Length = 391
Score = 589 bits (1519), Expect = e-166, Method: Compositional matrix adjust.
Identities = 280/367 (76%), Positives = 320/367 (87%)
Query: 39 GYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTA 98
G G SSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTA
Sbjct: 1 GSPGHMSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTA 60
Query: 99 VFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIH 158
VFVL+TLQQ EP GQV+ LV+CHTRELA+QI E+ERFS Y+P++KVAVF+GG++IK
Sbjct: 61 VFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKD 120
Query: 159 KDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKM 218
+++LK CP IVVGTPGRILALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+M
Sbjct: 121 EEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRM 180
Query: 219 TPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRK 278
TPH+KQVMMFSATLSKEIRPVC+KFMQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRK
Sbjct: 181 TPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRK 240
Query: 279 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGN 338
L DLLD L+FNQVVIFVKSV R L +LLVE NFP+I IH GM QEERL+RY+ FK+
Sbjct: 241 LFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQ 300
Query: 339 KRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDS 398
+RILVAT+L GRG+DIERVNI NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+
Sbjct: 301 RRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDA 360
Query: 399 DILNQVS 405
ILN V
Sbjct: 361 KILNDVQ 367
>gi|61679617|pdb|1XTJ|A Chain A, Structure Of Human Uap56 In Complex With Adp
Length = 386
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 280/366 (76%), Positives = 320/366 (87%)
Query: 39 GYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTA 98
G G SSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTA
Sbjct: 1 GSPGHMSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTA 60
Query: 99 VFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIH 158
VFVL+TLQQ EP GQV+ LV+CHTRELA+QI E+ERFS Y+P++KVAVF+GG++IK
Sbjct: 61 VFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKD 120
Query: 159 KDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKM 218
+++LK CP IVVGTPGRILALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+M
Sbjct: 121 EEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRM 180
Query: 219 TPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRK 278
TPH+KQVMMFSATLSKEIRPVC+KFMQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRK
Sbjct: 181 TPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRK 240
Query: 279 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGN 338
L DLLD L+FNQVVIFVKSV R L +LLVE NFP+I IH GM QEERL+RY+ FK+
Sbjct: 241 LFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQ 300
Query: 339 KRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDS 398
+RILVAT+L GRG+DIERVNI NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+
Sbjct: 301 RRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDA 360
Query: 399 DILNQV 404
ILN V
Sbjct: 361 KILNDV 366
>gi|301117800|ref|XP_002906628.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262107977|gb|EEY66029.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 455
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 289/436 (66%), Positives = 340/436 (77%), Gaps = 29/436 (6%)
Query: 1 MGETRDNEYEDELLDYEEEDAQAPDSVATKANGEAAKK---------------------- 38
M + E++DEL+DYEEE+ D+ A G+ AKK
Sbjct: 1 MPGEENKEFDDELVDYEEEEETTTDASKAAAEGKDAKKERRLGRRRRFLARLPACGGPLE 60
Query: 39 ------GYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKS 92
YVGIHSSGFRDF+LKPE LRA+VD GFEHPSEVQHECIPQA+LGMD+ICQAKS
Sbjct: 61 RPTMPGHYVGIHSSGFRDFILKPECLRAVVDCGFEHPSEVQHECIPQAVLGMDIICQAKS 120
Query: 93 GMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGG 152
GMGKTAVFVL+TL Q EP GQ++ +V+CHTRELA+QI HE+ERFS YL D+K VFYGG
Sbjct: 121 GMGKTAVFVLATLHQIEPVDGQISVVVMCHTRELAFQIAHEYERFSKYLVDVKTGVFYGG 180
Query: 153 VNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDV 212
V I +++ LKN P I+VGTPGRIL L R+K L L V+HF++DECDKMLE++DMRRD+
Sbjct: 181 VPISQNREALKNNPPHILVGTPGRILGLLREKTLKLDKVKHFVMDECDKMLEAIDMRRDI 240
Query: 213 QEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSE 272
QEIFK TPHDKQVMMFSATLSKEIRPVC+KF QDPMEIYVDDE KLTLHGL Q+YIKL E
Sbjct: 241 QEIFKATPHDKQVMMFSATLSKEIRPVCRKFCQDPMEIYVDDETKLTLHGLQQYYIKLEE 300
Query: 273 LEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYK 332
EKNRKLNDLLDAL+FNQVVIFV +R ELN+LL ECNFPSICI + +SQEER+ RYK
Sbjct: 301 SEKNRKLNDLLDALEFNQVVIFVSKKNRGRELNRLLNECNFPSICITADLSQEERIKRYK 360
Query: 333 GFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFV 392
FK+ KRILV TDL GRG+DIERVNIV+NYD P+ +D YLHRVGRAGRFGTKGL+I+F+
Sbjct: 361 SFKDFQKRILVTTDLFGRGMDIERVNIVVNYDFPNDSDQYLHRVGRAGRFGTKGLSISFI 420
Query: 393 SSASDSDILNQV-SKF 407
SS D+++L +V S+F
Sbjct: 421 SSEEDTEMLAKVQSRF 436
>gi|325183657|emb|CCA18117.1| predicted protein putative [Albugo laibachii Nc14]
Length = 426
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 278/374 (74%), Positives = 322/374 (86%), Gaps = 2/374 (0%)
Query: 36 AKKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGM 94
AKKG YVGIHSSGFRDF+LKPE LRA+VD GFEHPSEVQHECIPQA+LGMD+ICQAKSGM
Sbjct: 34 AKKGHYVGIHSSGFRDFILKPECLRAVVDCGFEHPSEVQHECIPQAVLGMDIICQAKSGM 93
Query: 95 GKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVN 154
GKTAVFVL+TL Q EP GQ++ +VLCHTRELA+QI HE+ERFS YL ++K AVFYGG+
Sbjct: 94 GKTAVFVLATLHQIEPVDGQISVMVLCHTRELAFQIAHEYERFSKYLHNVKTAVFYGGIA 153
Query: 155 IKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQE 214
I +D LK+ P IVVGTPGRIL L R+K + L V+HF++DECDK+LE+LDMRRDVQE
Sbjct: 154 ITKDRDTLKSNTPHIVVGTPGRILGLLREKSIKLDKVKHFVMDECDKLLEALDMRRDVQE 213
Query: 215 IFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE 274
IF+ TPHDKQVMMFSATLSKEIRPVC+KF QDPMEIYVDDE KLTLHGL Q+YIKL+E E
Sbjct: 214 IFRSTPHDKQVMMFSATLSKEIRPVCRKFCQDPMEIYVDDETKLTLHGLQQYYIKLAESE 273
Query: 275 KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGF 334
KNRKLN+LLDAL+FNQVVIFV +RA ELN+LL ECNFP+ICI S ++QEER+ RYK F
Sbjct: 274 KNRKLNELLDALEFNQVVIFVSKKNRARELNRLLNECNFPAICITSDLTQEERIKRYKSF 333
Query: 335 KEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSS 394
K+ KR+LV TDL GRG+DIERVNIVINYD P+ +D YLHRVGRAGRFGTKGL+I+F+SS
Sbjct: 334 KDFQKRLLVTTDLFGRGMDIERVNIVINYDFPNDSDQYLHRVGRAGRFGTKGLSISFISS 393
Query: 395 ASDSDILNQV-SKF 407
DS +L QV S+F
Sbjct: 394 DEDSAMLAQVQSRF 407
>gi|395828829|ref|XP_003787566.1| PREDICTED: spliceosome RNA helicase DDX39B-like isoform 2 [Otolemur
garnettii]
Length = 431
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 294/410 (71%), Positives = 341/410 (83%), Gaps = 17/410 (4%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPEL 57
+N+ ++ELLDYEE D V T A G+ A K YV IHSSGFRDFLLKPEL
Sbjct: 3 ENDVDNELLDYEE------DEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPEL 56
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA 117
LRAIVD GFEHPSEVQHECIPQ+ILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+
Sbjct: 57 LRAIVDCGFEHPSEVQHECIPQSILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSV 116
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFY---GGVNIKIHKDLLKNECPQIVVGTP 174
LV+CHT+ELA+QI E+ERFS Y+P++KVAVF+ GG++IK +++LK CP IVVGTP
Sbjct: 117 LVMCHTQELAFQISKEYERFSKYMPNVKVAVFFVFFGGLSIKKDEEVLKKNCPHIVVGTP 176
Query: 175 GRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSK 234
GRILALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSK
Sbjct: 177 GRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSK 236
Query: 235 EIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIF 294
EIRPVC+KFMQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIF
Sbjct: 237 EIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIF 296
Query: 295 VKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDI 354
VKSV R L +LLVE NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L G G+DI
Sbjct: 297 VKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGHGMDI 356
Query: 355 ERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
ERVNI NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN V
Sbjct: 357 ERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDV 406
>gi|198430623|ref|XP_002127634.1| PREDICTED: similar to HLA-B associated transcript 1 [Ciona
intestinalis]
Length = 424
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 280/365 (76%), Positives = 316/365 (86%)
Query: 40 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 99
YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQ+ECIPQA+LGMDV+CQAKSGMGKTAV
Sbjct: 36 YVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQNECIPQAVLGMDVLCQAKSGMGKTAV 95
Query: 100 FVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHK 159
FVL+TLQQ EP GQV+ LV+CHTRELA+QI E+ERFS Y+P IKVAVF+GG+ I +
Sbjct: 96 FVLATLQQLEPVDGQVSVLVMCHTRELAFQISKEYERFSKYMPTIKVAVFFGGLPITKDQ 155
Query: 160 DLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
LKN CP IVVGTPGR+LAL R K L+LKNV+HFILDECDKMLE LDMRRDVQ+IF++T
Sbjct: 156 TTLKNNCPHIVVGTPGRLLALIRSKSLTLKNVKHFILDECDKMLEQLDMRRDVQDIFRLT 215
Query: 220 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKL 279
PH+KQVMMFSATLSK+IRPVCKKFMQDPME+YVDDEAKLTLHGL QHY+KL + EKNRKL
Sbjct: 216 PHEKQVMMFSATLSKDIRPVCKKFMQDPMEVYVDDEAKLTLHGLQQHYVKLKDNEKNRKL 275
Query: 280 NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNK 339
DLLDAL+FNQVVIFVKSV R L +LL E NFP+I IH M+QEERL+RY+ FK +
Sbjct: 276 FDLLDALEFNQVVIFVKSVQRCMALAQLLKEQNFPAIDIHRAMNQEERLSRYQLFKNFER 335
Query: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSD 399
RILVAT+L GRG+DIERVNIV NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+
Sbjct: 336 RILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDETDAK 395
Query: 400 ILNQV 404
LN V
Sbjct: 396 TLNDV 400
>gi|328856884|gb|EGG06003.1| hypothetical protein MELLADRAFT_48571 [Melampsora larici-populina
98AG31]
Length = 434
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 284/413 (68%), Positives = 337/413 (81%), Gaps = 13/413 (3%)
Query: 8 EYEDELLDYEEEDAQ-AP---------DSVATKANGEAAKKGYVGIHSSGFRDFLLKPEL 57
E+ ++L+DY+E+DA AP + A +NG+ K YVGIHS+GFRDFLLKPEL
Sbjct: 3 EHAEDLIDYDEDDAGLAPPVTSITSTTNGGAIPSNGKDQKGSYVGIHSTGFRDFLLKPEL 62
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA 117
LRAI D GFEHPSEVQ ECIPQAILGMDV+CQAKSGMGKTAVFV +TLQQ +P G+V+
Sbjct: 63 LRAISDLGFEHPSEVQQECIPQAILGMDVLCQAKSGMGKTAVFVTATLQQIDPKDGEVSM 122
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK--NECPQIVVGTPG 175
LVLCHTRELAYQI +E+ RFS Y+PD++ AV YGGV+IK D+LK ++CP I+VGTPG
Sbjct: 123 LVLCHTRELAYQIRNEYARFSKYMPDVRTAVVYGGVSIKQDADMLKAKDKCPHIIVGTPG 182
Query: 176 RILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKE 235
R+ AL RD L VR F+LDECDKMLES+DMRRDVQ++F TPH KQVMMFSATLSK+
Sbjct: 183 RLNALVRDGLLKCNTVRTFVLDECDKMLESVDMRRDVQQVFLATPHSKQVMMFSATLSKD 242
Query: 236 IRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFV 295
IRP+CKKFMQ+P+EIYVDDEAKLTLHGL QH++K+ E KNRKLNDLLD L+FNQV IFV
Sbjct: 243 IRPICKKFMQNPLEIYVDDEAKLTLHGLQQHFVKIEEAAKNRKLNDLLDTLEFNQVCIFV 302
Query: 296 KSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIE 355
KSVSRA +L++LL +CNFPSI IHSG+ QEER+ RYK FK KRILVATD+ GRGID+E
Sbjct: 303 KSVSRAVQLDQLLRDCNFPSIAIHSGLGQEERIARYKQFKAFEKRILVATDIFGRGIDVE 362
Query: 356 RVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV-SKF 407
RVNIV+NYD P AD+YLHRVGRAGRFGTKGLAITFV+S D +L+ + S+F
Sbjct: 363 RVNIVVNYDTPGEADSYLHRVGRAGRFGTKGLAITFVASDGDQTVLDAIQSRF 415
>gi|205942|gb|AAA41787.1| liver nuclear protein p47 [Rattus norvegicus]
Length = 399
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 282/385 (73%), Positives = 331/385 (85%), Gaps = 2/385 (0%)
Query: 6 DNEYEDELLDYEEEDAQ-APDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVD 63
+N+ ++ELLDYE+++ + A + T+A + KG YV IHSSGFRDFLLKPELLRAIVD
Sbjct: 3 ENDVDNELLDYEDDEVETAAGADGTEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVD 62
Query: 64 SGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHT 123
GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHT
Sbjct: 63 CGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHT 122
Query: 124 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARD 183
RELA+QI E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRILALAR+
Sbjct: 123 RELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARN 182
Query: 184 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF 243
K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIRPVC+KF
Sbjct: 183 KSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKF 242
Query: 244 MQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAE 303
MQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R
Sbjct: 243 MQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIA 302
Query: 304 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 363
L +LLVE N P+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DI RVNI NY
Sbjct: 303 LAQLLVEQNLPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIVRVNIAFNY 362
Query: 364 DMPDSADTYLHRVGRAGRFGTKGLA 388
DMP+ +DTYLHRV RAGRFGTKGLA
Sbjct: 363 DMPEDSDTYLHRVARAGRFGTKGLA 387
>gi|339248287|ref|XP_003375777.1| DEAD-box helicase 1 [Trichinella spiralis]
gi|316970810|gb|EFV54682.1| DEAD-box helicase 1 [Trichinella spiralis]
Length = 714
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 282/416 (67%), Positives = 333/416 (80%), Gaps = 11/416 (2%)
Query: 11 DELLDYEEE-----------DAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLR 59
+ELLDYE+E D Q + + K Y IHSSGFRDFLLKPELLR
Sbjct: 7 EELLDYEDEQEETVQHSKIADIQTDHHLEVVGGKKPVKGAYASIHSSGFRDFLLKPELLR 66
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
+IVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFV++TLQQ G+V LV
Sbjct: 67 SIVDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVIATLQQLNAVEGEVHCLV 126
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA 179
+CHTRELA+QI E+ERF Y+P +KVAVF+GG N+K +D+L+N P IVVGTPGR+LA
Sbjct: 127 MCHTRELAFQISKEYERFCKYMPKVKVAVFFGGTNVKKDEDMLRNNTPHIVVGTPGRLLA 186
Query: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
LAR++ LSLK++++FILDECD+ML LDMRRDVQEI+KMTP +KQVMMFSATLSKE+RPV
Sbjct: 187 LARNRVLSLKSIKYFILDECDRMLGDLDMRRDVQEIYKMTPREKQVMMFSATLSKELRPV 246
Query: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 299
CKKFMQDPME+YVDDEAKLTLHGL Q+Y+KL E EKN+KL +LLD L+FNQVVIFV+SV
Sbjct: 247 CKKFMQDPMEVYVDDEAKLTLHGLQQYYVKLKETEKNKKLFELLDVLEFNQVVIFVRSVQ 306
Query: 300 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNI 359
R LN+LL E NFPSI IH M+QEERL+RY+ F++ +KRILVAT+L GRG+DIERVNI
Sbjct: 307 RCMALNELLTEQNFPSIAIHRSMAQEERLSRYQQFRDFHKRILVATNLFGRGMDIERVNI 366
Query: 360 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKFMFLLIGSF 415
V NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS SD+ +LN V + IG
Sbjct: 367 VFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDESDAKVLNDVQDRFDVSIGEL 422
>gi|323455519|gb|EGB11387.1| hypothetical protein AURANDRAFT_52520 [Aureococcus anophagefferens]
Length = 459
Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust.
Identities = 278/384 (72%), Positives = 323/384 (84%), Gaps = 10/384 (2%)
Query: 34 EAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSG 93
EA K YVGIH+SGFRDF+LKPE LRA+VD GFEHPSEVQHECIPQA+LGMD+ICQAKSG
Sbjct: 58 EAKKGHYVGIHASGFRDFILKPECLRAVVDCGFEHPSEVQHECIPQAVLGMDIICQAKSG 117
Query: 94 MGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGV 153
MGKTAVFVL+TL Q EP G+++ LV+CHTRELA+QI +E+ RFS YLP +KV VFYGGV
Sbjct: 118 MGKTAVFVLATLHQLEPVDGEISVLVMCHTRELAFQIKNEYARFSKYLPAVKVEVFYGGV 177
Query: 154 NIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQ 213
I +K LK P IVVGTPGRIL L + KDL L ++HF++DECD+MLE+LDMR+D+Q
Sbjct: 178 PITQNKAALKANTPHIVVGTPGRILGLVKSKDLVLGKLKHFVMDECDRMLEALDMRKDIQ 237
Query: 214 EIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEL 273
EIF+ TPH KQVMMFSATLSKEIRPVCKKF QDPMEIYVDD+ KLTLHGL Q+Y+KL E
Sbjct: 238 EIFRTTPHQKQVMMFSATLSKEIRPVCKKFCQDPMEIYVDDDTKLTLHGLQQYYVKLQEA 297
Query: 274 EKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKG 333
EKNRKLNDLLDALDFNQVVIFV V+RA EL++LL ECNFPS+CIHSGM+QEER+TRYK
Sbjct: 298 EKNRKLNDLLDALDFNQVVIFVSKVARATELDRLLCECNFPSVCIHSGMTQEERITRYKD 357
Query: 334 FKEGNKRILVATDLVGRGIDIERVNIVINYDMPD---------SADTYLHRVGRAGRFGT 384
FK+ KRILV+TDL GRGIDIERVNIVINYD P+ ++D YLHRVGRAGRFGT
Sbjct: 358 FKDFKKRILVSTDLFGRGIDIERVNIVINYDFPEVKEGAAQTTASDQYLHRVGRAGRFGT 417
Query: 385 KGLAITFVSSASDSDILNQV-SKF 407
KGL+I+F+SS D++IL V S+F
Sbjct: 418 KGLSISFISSKEDAEILAAVQSRF 441
>gi|195118098|ref|XP_002003577.1| GI21901 [Drosophila mojavensis]
gi|195388486|ref|XP_002052911.1| GJ17817 [Drosophila virilis]
gi|193914152|gb|EDW13019.1| GI21901 [Drosophila mojavensis]
gi|194149368|gb|EDW65066.1| GJ17817 [Drosophila virilis]
Length = 424
Score = 587 bits (1512), Expect = e-165, Method: Compositional matrix adjust.
Identities = 286/400 (71%), Positives = 331/400 (82%), Gaps = 8/400 (2%)
Query: 11 DELLDYEEEDAQAPDSVATKANGEAAKKG----YVGIHSSGFRDFLLKPELLRAIVDSGF 66
D+LLDYE+E+ +V N EA KK YV IHSSGFRDFLLKPE+LRAIVD GF
Sbjct: 5 DDLLDYEDEEQNETTAVE---NQEAPKKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCGF 61
Query: 67 EHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVT-ALVLCHTRE 125
EHPSEVQHECIPQA+LGMD++CQAKSGMGKTAVFVL+TLQQ EP+ LV+CHTRE
Sbjct: 62 EHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSDNNTCHVLVMCHTRE 121
Query: 126 LAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKD 185
LA+QI E+ERFS Y+P +KVAVF+GG+ I+ ++ LKN P IVVGTPGRILAL R+K
Sbjct: 122 LAFQISKEYERFSKYMPTVKVAVFFGGLAIQKDEETLKNGTPHIVVGTPGRILALIRNKK 181
Query: 186 LSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQ 245
L+LK+++HF+LDECDKMLE LDMRRDVQEIF+ TPH KQVMMFSATLSKEIRPVCKKFMQ
Sbjct: 182 LNLKHLKHFVLDECDKMLEQLDMRRDVQEIFRSTPHGKQVMMFSATLSKEIRPVCKKFMQ 241
Query: 246 DPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELN 305
DPME+YVDDEAKLTLHGL QHY+ L E EKN+KL +LLD L+FNQVVIFVKSV R L
Sbjct: 242 DPMEVYVDDEAKLTLHGLQQHYVNLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCVALA 301
Query: 306 KLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDM 365
+LL E NFP+I IH GM+Q+ERL RY+ FK+ KRILVAT+L GRG+DIERVNIV NYDM
Sbjct: 302 QLLTEQNFPAIGIHRGMNQDERLNRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDM 361
Query: 366 PDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVS 405
P+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN+V
Sbjct: 362 PEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNEVQ 401
>gi|443689578|gb|ELT91951.1| hypothetical protein CAPTEDRAFT_165082, partial [Capitella teleta]
Length = 433
Score = 586 bits (1511), Expect = e-165, Method: Compositional matrix adjust.
Identities = 275/358 (76%), Positives = 315/358 (87%)
Query: 36 AKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMG 95
K YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMG
Sbjct: 35 VKGTYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMG 94
Query: 96 KTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNI 155
KTAVFVL+TLQQ EP QV+ LVLCHTRELA+QI E+ERFS Y+ IK+AVF+GG+NI
Sbjct: 95 KTAVFVLATLQQIEPVENQVSVLVLCHTRELAFQISKEYERFSKYMSGIKIAVFFGGMNI 154
Query: 156 KIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEI 215
K + +LKN CP I+VGTPGRILAL R+K L+LKN++HF+LDECDKMLE+LDMRRDVQEI
Sbjct: 155 KKDETVLKNNCPNIIVGTPGRILALIRNKHLNLKNIKHFVLDECDKMLEALDMRRDVQEI 214
Query: 216 FKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEK 275
F+MTPH+KQVMMFSATLS+EIRPVCKKFMQDPME+YVDD++KLTLHGL QHYIKL + EK
Sbjct: 215 FRMTPHEKQVMMFSATLSEEIRPVCKKFMQDPMEVYVDDDSKLTLHGLQQHYIKLKDNEK 274
Query: 276 NRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFK 335
NR+L +LLDAL+FNQV+IFVKSV R L +LLVE NFP+I IH ++QEERL +Y+ FK
Sbjct: 275 NRRLFELLDALEFNQVIIFVKSVQRCMALAQLLVEQNFPAIAIHRALTQEERLAKYQQFK 334
Query: 336 EGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
+ KRILVAT+L GRG+DIERVNIV NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS
Sbjct: 335 DFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVS 392
>gi|170575130|ref|XP_001893112.1| Probable ATP-dependent RNA helicase p47 homolog [Brugia malayi]
gi|158601044|gb|EDP38054.1| Probable ATP-dependent RNA helicase p47 homolog, putative [Brugia
malayi]
Length = 710
Score = 586 bits (1510), Expect = e-165, Method: Compositional matrix adjust.
Identities = 282/399 (70%), Positives = 326/399 (81%), Gaps = 5/399 (1%)
Query: 10 EDELLDYEEEDAQAPDSVATKANGEAAKK----GYVGIHSSGFRDFLLKPELLRAIVDSG 65
ED+LLDYEEE + D T+ NG A K Y IHSSGFRDFLLKPELLRAIVD G
Sbjct: 3 EDQLLDYEEEQEETTDGNKTE-NGSATDKKIKGTYASIHSSGFRDFLLKPELLRAIVDCG 61
Query: 66 FEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRE 125
FEHPSEVQHECIPQAILGMD++CQAKSGMGKTAVFVL+TLQQ EP G+V+ LV+CHTRE
Sbjct: 62 FEHPSEVQHECIPQAILGMDIVCQAKSGMGKTAVFVLATLQQLEPVDGEVSVLVMCHTRE 121
Query: 126 LAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKD 185
LA+QI E+ERFS Y+P +++AVF+GG+ IK ++ LKN P IVVGTPGR L LAR
Sbjct: 122 LAFQISKEYERFSKYIPGVRIAVFFGGIPIKKDEETLKNNTPHIVVGTPGRTLQLARQGS 181
Query: 186 LSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQ 245
L LKN+++F+LDECDKM+ DMRRDVQEI KMTP +KQVMMFSATL +++R VCKKFMQ
Sbjct: 182 LKLKNIKYFVLDECDKMIGDNDMRRDVQEIVKMTPQEKQVMMFSATLPRDLRVVCKKFMQ 241
Query: 246 DPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELN 305
DPME+YVDDEAKLTLHGL QHY+KL E EKN+KL +LLD L+FNQVVIFV+SV R L+
Sbjct: 242 DPMEVYVDDEAKLTLHGLQQHYVKLKETEKNKKLLELLDQLEFNQVVIFVRSVQRCGALH 301
Query: 306 KLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDM 365
LL E NFPSI IH GM QEERL+RY+ FK+ KRILVAT+L GRG+DIERVNIV NYDM
Sbjct: 302 TLLSEQNFPSIAIHRGMPQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDM 361
Query: 366 PDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
P+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN V
Sbjct: 362 PEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDV 400
>gi|391346453|ref|XP_003747488.1| PREDICTED: spliceosome RNA helicase DDX39B-like [Metaseiulus
occidentalis]
Length = 424
Score = 586 bits (1510), Expect = e-165, Method: Compositional matrix adjust.
Identities = 281/396 (70%), Positives = 330/396 (83%), Gaps = 3/396 (0%)
Query: 12 ELLDYEEEDAQAPDSVATKANGEAAKK---GYVGIHSSGFRDFLLKPELLRAIVDSGFEH 68
+LLDYE+E+ Q G+ K GYV IHSSGFRDFLLKPELLRAIVD GFEH
Sbjct: 5 DLLDYEDEEDQNQQIADGAEAGKEVKTPAGGYVSIHSSGFRDFLLKPELLRAIVDCGFEH 64
Query: 69 PSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAY 128
PSEVQHECIPQAILGMD++CQAKSGMGKTAVFVL+TLQQ EP G+V+ LV+CHTRELA+
Sbjct: 65 PSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQLEPVDGEVSVLVMCHTRELAF 124
Query: 129 QICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSL 188
QI E+ERFS Y+P +++ VF+GG++I+ + LK+ CP IVVGTPGRILAL K LSL
Sbjct: 125 QISKEYERFSKYMPGVRIGVFFGGLSIQNDEKTLKSACPHIVVGTPGRILALIGSKKLSL 184
Query: 189 KNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPM 248
KNV+HF+LDECDKML+SLDMRRDVQEIF+ TP++KQV+MFSATLSKE+RPVC KFMQDPM
Sbjct: 185 KNVKHFVLDECDKMLDSLDMRRDVQEIFRNTPNEKQVLMFSATLSKEVRPVCLKFMQDPM 244
Query: 249 EIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLL 308
EIYVD+EAKLTLHGL Q+Y+KL + EKNRKL +LLD L+FNQVVIFVKSV R L++LL
Sbjct: 245 EIYVDNEAKLTLHGLQQYYVKLKDNEKNRKLFELLDVLEFNQVVIFVKSVQRCMALSQLL 304
Query: 309 VECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDS 368
E NFP+I IH M+QE+RL RY+ FK+ KRILVAT+L GRG+DIERVNIV NYDMP+S
Sbjct: 305 AEQNFPAIAIHRAMTQEDRLARYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPES 364
Query: 369 ADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
DTYLHRV RAGRFGTKGLAITFVS + D+ LN+V
Sbjct: 365 TDTYLHRVARAGRFGTKGLAITFVSDSEDAKTLNEV 400
>gi|194856731|ref|XP_001968815.1| GG24297 [Drosophila erecta]
gi|195473856|ref|XP_002089208.1| Hel25E [Drosophila yakuba]
gi|190660682|gb|EDV57874.1| GG24297 [Drosophila erecta]
gi|194175309|gb|EDW88920.1| Hel25E [Drosophila yakuba]
Length = 424
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 285/400 (71%), Positives = 332/400 (83%), Gaps = 8/400 (2%)
Query: 11 DELLDYEEEDAQAPDSVATKANGEAAKKG----YVGIHSSGFRDFLLKPELLRAIVDSGF 66
D+LLDYE+E+ +V N EA KK YV IHSSGFRDFLLKPE+LRAIVD GF
Sbjct: 5 DDLLDYEDEEQTETTAVE---NQEAPKKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCGF 61
Query: 67 EHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVT-ALVLCHTRE 125
EHPSEVQHECIPQA+LGMD++CQAKSGMGKTAVFVL+TLQQ EP+ LV+CHTRE
Sbjct: 62 EHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSDNNTCHVLVMCHTRE 121
Query: 126 LAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKD 185
LA+QI E+ERFS Y+P +KVAVF+GG+ I+ ++ LK+ P IVVGTPGRILAL R+K
Sbjct: 122 LAFQISKEYERFSKYMPTVKVAVFFGGMAIQKDEETLKSGTPHIVVGTPGRILALIRNKK 181
Query: 186 LSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQ 245
L+LK+++HF+LDECDKMLE LDMRRDVQEIF+ TPH KQVMMFSATLSK+IRPVCKKFMQ
Sbjct: 182 LNLKHLKHFVLDECDKMLEQLDMRRDVQEIFRSTPHGKQVMMFSATLSKDIRPVCKKFMQ 241
Query: 246 DPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELN 305
DPME+YVDDEAKLTLHGL QHY+ L E EKN+KL +LLD L+FNQVVIFVKSV R L+
Sbjct: 242 DPMEVYVDDEAKLTLHGLQQHYVNLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCVALS 301
Query: 306 KLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDM 365
+LL E NFP+I IH GM+QEERL RY+ FK+ KRILVAT+L GRG+DIERVNIV NYDM
Sbjct: 302 QLLTEQNFPAIGIHRGMTQEERLNRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDM 361
Query: 366 PDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVS 405
P+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN+V
Sbjct: 362 PEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNEVQ 401
>gi|60594465|pdb|1XTK|A Chain A, Structure Of Decd To Dead Mutation Of Human Uap56
Length = 390
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 277/362 (76%), Positives = 317/362 (87%)
Query: 44 HSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLS 103
H SGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+
Sbjct: 5 HMSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLA 64
Query: 104 TLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK 163
TLQQ EP GQV+ LV+CHTRELA+QI E+ERFS Y+P++KVAVF+GG++IK +++LK
Sbjct: 65 TLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLK 124
Query: 164 NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDK 223
CP IVVGTPGRILALAR+K L+LK+++HFILDE DKMLE LDMRRDVQEIF+MTPH+K
Sbjct: 125 KNCPHIVVGTPGRILALARNKSLNLKHIKHFILDEADKMLEQLDMRRDVQEIFRMTPHEK 184
Query: 224 QVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLL 283
QVMMFSATLSKEIRPVC+KFMQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLL
Sbjct: 185 QVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLL 244
Query: 284 DALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILV 343
D L+FNQVVIFVKSV R L +LLVE NFP+I IH GM QEERL+RY+ FK+ +RILV
Sbjct: 245 DVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILV 304
Query: 344 ATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQ 403
AT+L GRG+DIERVNI NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN
Sbjct: 305 ATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILND 364
Query: 404 VS 405
V
Sbjct: 365 VQ 366
>gi|328773520|gb|EGF83557.1| hypothetical protein BATDEDRAFT_15696 [Batrachochytrium
dendrobatidis JAM81]
Length = 443
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 284/415 (68%), Positives = 338/415 (81%), Gaps = 21/415 (5%)
Query: 11 DELLDYEEED----------AQAPD-----SVATKANGEAAKKG-YVGIHSSGFRDFLLK 54
DELLDY +ED A P+ +A A+ + KKG YVGIH++GFRDFLLK
Sbjct: 6 DELLDYADEDEDQTEVLTSHAGVPNISAVGGLAAPADDKETKKGSYVGIHATGFRDFLLK 65
Query: 55 PELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPN--- 111
PELLRAI D GFEHPSEVQ ECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ + +
Sbjct: 66 PELLRAIGDCGFEHPSEVQQECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLDTSAAA 125
Query: 112 --PGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQI 169
P + +V+CHTRELAYQI +E+ RFS YLPD+K AV YGG +I+ + D LKN+ PQI
Sbjct: 126 GAPSDPSVIVICHTRELAYQIKNEYARFSKYLPDVKTAVLYGGTSIRQNIDTLKNDKPQI 185
Query: 170 VVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFS 229
+V TPGR+LAL RDK ++L V+HF+LDECDK+L++LDMR+DVQ+IF+ TPH KQVMM+S
Sbjct: 186 IVATPGRLLALIRDKAINLATVKHFVLDECDKILDALDMRKDVQDIFRSTPHHKQVMMYS 245
Query: 230 ATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFN 289
ATLSKEIRPVCKKFMQ+P+EI+VDD+ KLTLHGL Q+Y+KLSE K RKLNDLLD+L+FN
Sbjct: 246 ATLSKEIRPVCKKFMQNPLEIFVDDQTKLTLHGLQQYYLKLSENAKTRKLNDLLDSLEFN 305
Query: 290 QVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVG 349
QV IFVKSV RA EL++LLV+C FPSICIHS + QEER+ RYK FK+ KRI+VATD+ G
Sbjct: 306 QVCIFVKSVQRAVELDRLLVKCGFPSICIHSQLQQEERIARYKSFKDFEKRIMVATDIFG 365
Query: 350 RGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
RGID+ERVNIVINYDM DS D YLHRVGRAGRFGTKGLAITFVSS D+++LNQV
Sbjct: 366 RGIDVERVNIVINYDMSDSPDAYLHRVGRAGRFGTKGLAITFVSSDEDTEVLNQV 420
>gi|194759123|ref|XP_001961799.1| GF14747 [Drosophila ananassae]
gi|190615496|gb|EDV31020.1| GF14747 [Drosophila ananassae]
Length = 424
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 285/399 (71%), Positives = 331/399 (82%), Gaps = 8/399 (2%)
Query: 11 DELLDYEEEDAQAPDSVATKANGEAAKKG----YVGIHSSGFRDFLLKPELLRAIVDSGF 66
D+LLDYE+E+ +V N EA KK YV IHSSGFRDFLLKPE+LRAIVD GF
Sbjct: 5 DDLLDYEDEEQTETTAVE---NQEAPKKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCGF 61
Query: 67 EHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVT-ALVLCHTRE 125
EHPSEVQHECIPQA+LGMD++CQAKSGMGKTAVFVL+TLQQ EP+ LV+CHTRE
Sbjct: 62 EHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSDNNTCHVLVMCHTRE 121
Query: 126 LAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKD 185
LA+QI E+ERFS Y+P +KVAVF+GG+ I ++ LK+ P IVVGTPGRILAL R+K
Sbjct: 122 LAFQISKEYERFSKYMPTVKVAVFFGGLAITKDEETLKSGTPHIVVGTPGRILALIRNKK 181
Query: 186 LSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQ 245
L+LK+++HF+LDECDKMLE LDMRRDVQEIF+ TPH KQVMMFSATLSK+IRPVCKKFMQ
Sbjct: 182 LNLKHLKHFVLDECDKMLEQLDMRRDVQEIFRSTPHGKQVMMFSATLSKDIRPVCKKFMQ 241
Query: 246 DPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELN 305
DPME+YVDDEAKLTLHGL QHY+ L E EKN+KL +LLD L+FNQVVIFVKSV R L+
Sbjct: 242 DPMEVYVDDEAKLTLHGLQQHYVNLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCVALS 301
Query: 306 KLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDM 365
+LL E NFP+I IH GM+QEERL RY+ FK+ KRILVAT+L GRG+DIERVNIV NYDM
Sbjct: 302 QLLTEQNFPAIGIHRGMTQEERLNRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDM 361
Query: 366 PDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
P+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN+V
Sbjct: 362 PEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNEV 400
>gi|195034694|ref|XP_001988957.1| GH11448 [Drosophila grimshawi]
gi|193904957|gb|EDW03824.1| GH11448 [Drosophila grimshawi]
Length = 424
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 282/397 (71%), Positives = 331/397 (83%), Gaps = 2/397 (0%)
Query: 11 DELLDYEEEDAQAPDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHP 69
D+LLDYE+E+ +V ++ + KG YV IHSSGFRDFLLKPE+LRAIVD GFEHP
Sbjct: 5 DDLLDYEDEEQNETTAVESQEAPKKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCGFEHP 64
Query: 70 SEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEP-NPGQVTALVLCHTRELAY 128
SEVQHECIPQA+LGMD++CQAKSGMGKTAVFVL+TLQQ EP + LV+CHTRELA+
Sbjct: 65 SEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPADNNTCHVLVMCHTRELAF 124
Query: 129 QICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSL 188
QI E+ERFS Y+P +KVAVF+GG+ I+ ++ LKN P IVVGTPGRILAL R+K L+L
Sbjct: 125 QISKEYERFSKYMPTVKVAVFFGGLAIQKDEETLKNGTPHIVVGTPGRILALIRNKKLNL 184
Query: 189 KNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPM 248
K+++HF+LDECDKMLE LDMRRDVQEIF+ TPH KQVMMFSATLSKEIRPVCKKFMQDPM
Sbjct: 185 KHLKHFVLDECDKMLEQLDMRRDVQEIFRSTPHGKQVMMFSATLSKEIRPVCKKFMQDPM 244
Query: 249 EIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLL 308
E+YVDDEAKLTLHGL QHY+ L E EKN+KL +LLD L+FNQVVIFVKSV R L +LL
Sbjct: 245 EVYVDDEAKLTLHGLQQHYVNLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCTALAQLL 304
Query: 309 VECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDS 368
E NFP+I IH GM+Q++RL RY+ FK+ KRILVAT+L GRG+DIERVNIV NYDMP+
Sbjct: 305 TEQNFPAIGIHRGMNQDDRLNRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPED 364
Query: 369 ADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVS 405
+DTYLHRV RAGRFGTKGLAITFVS +D+ ILN+V
Sbjct: 365 SDTYLHRVARAGRFGTKGLAITFVSDENDAKILNEVQ 401
>gi|392576759|gb|EIW69889.1| hypothetical protein TREMEDRAFT_73647 [Tremella mesenterica DSM
1558]
Length = 428
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 281/402 (69%), Positives = 329/402 (81%), Gaps = 5/402 (1%)
Query: 10 EDELLDYEE--EDAQAPDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDSGF 66
E+EL+DY+E E+ AP AT E KKG YVGIHS+GFRDFLLKPELLRAI D GF
Sbjct: 6 EEELVDYDEAAEETFAPPVAATNGKAEGDKKGSYVGIHSTGFRDFLLKPELLRAISDLGF 65
Query: 67 EHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTREL 126
EHPSEVQ ECIPQAILG DV+CQAKSGMGKTAVFVL+ LQQ EP G+V+ ++LCHTREL
Sbjct: 66 EHPSEVQQECIPQAILGTDVLCQAKSGMGKTAVFVLACLQQIEPVDGEVSIIILCHTREL 125
Query: 127 AYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDK 184
AYQI +EF RFS ++ ++ AVFYGG I ++LL N+ CP IVVGTPGR++AL RDK
Sbjct: 126 AYQIRNEFARFSKFMTAVRTAVFYGGTPISADQELLGNKEKCPHIVVGTPGRMMALTRDK 185
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 244
L +V+HF+LDECDKML+ LDMRRDVQEIF+ TPH KQVMMFSATLSKEIR CKKFM
Sbjct: 186 TLKATHVKHFVLDECDKMLDQLDMRRDVQEIFRATPHHKQVMMFSATLSKEIRATCKKFM 245
Query: 245 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 304
Q P+EIYVDDE KLTLHGL Q+Y+KL E EKNRKLNDLLD L+FNQV IFVKSVSRA +L
Sbjct: 246 QSPLEIYVDDETKLTLHGLQQYYLKLEEREKNRKLNDLLDNLEFNQVCIFVKSVSRATQL 305
Query: 305 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 364
+ LL ECNFPSICIHS + Q ER++R++ FK KRILVATD+ GRGID+ERVN+VINYD
Sbjct: 306 DALLQECNFPSICIHSALPQPERISRFQQFKAFEKRILVATDIFGRGIDVERVNVVINYD 365
Query: 365 MPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
P AD+YLHRVGRAGRFGTKGLAITFV+S +D ++L ++ +
Sbjct: 366 APGDADSYLHRVGRAGRFGTKGLAITFVASDADQEVLQKIQE 407
>gi|388584005|gb|EIM24306.1| P-loop containing nucleoside triphosphate hydrolase protein
[Wallemia sebi CBS 633.66]
Length = 427
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 281/375 (74%), Positives = 318/375 (84%), Gaps = 4/375 (1%)
Query: 37 KKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMG 95
KKG YVGIHS+GFRDFLLKPELLRAI D GFEHPSEVQ ECIPQAILGMDV+CQAKSGMG
Sbjct: 34 KKGSYVGIHSTGFRDFLLKPELLRAISDLGFEHPSEVQQECIPQAILGMDVVCQAKSGMG 93
Query: 96 KTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNI 155
KTAVFVL++LQQ EP G+V+ +VLCHTRELAYQI +E+ RFS Y+P+I+ +VF+GGV I
Sbjct: 94 KTAVFVLASLQQVEPVDGEVSVIVLCHTRELAYQIKNEYGRFSKYVPNIRTSVFFGGVPI 153
Query: 156 KIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQ 213
++ LKN+ CP ++VGTPGRI AL RD L ++HF+LDECDKMLE LDMRRDVQ
Sbjct: 154 TTDQETLKNKEKCPHVIVGTPGRINALVRDGSLKGSAIKHFVLDECDKMLEQLDMRRDVQ 213
Query: 214 EIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEL 273
EIFK+TPH KQVMMFSATLSKE+RPVCKKFMQ P+EIYVDDE KLTLHGL QHY+KLSE
Sbjct: 214 EIFKVTPHHKQVMMFSATLSKEVRPVCKKFMQSPLEIYVDDETKLTLHGLQQHYVKLSES 273
Query: 274 EKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKG 333
KNRKLNDLLD+LDFNQVVIFVKS RA EL+KLL ECNFPSICIHS MSQEER+ RY
Sbjct: 274 AKNRKLNDLLDSLDFNQVVIFVKSTLRANELDKLLRECNFPSICIHSRMSQEERIARYTK 333
Query: 334 FKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
FK+ RILVATD+ GRGID+ERVNIVINYD P AD+YLHRVGRAGRFGTKGLAITFVS
Sbjct: 334 FKQFETRILVATDIFGRGIDVERVNIVINYDTPTDADSYLHRVGRAGRFGTKGLAITFVS 393
Query: 394 SASDSDILNQV-SKF 407
D ++L + S+F
Sbjct: 394 QDEDDEVLKAIQSRF 408
>gi|452825333|gb|EME32330.1| ATP-dependent RNA helicase [Galdieria sulphuraria]
Length = 442
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 290/420 (69%), Positives = 336/420 (80%), Gaps = 14/420 (3%)
Query: 2 GETRDNEYEDE-LLDYEEED-AQAPDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELL 58
G+ +N DE L+DYEEED P A+ + +KKG YVGIHS+GF+DFLLKPELL
Sbjct: 4 GKKNENLVGDEDLVDYEEEDETSVPSGAVKSASTKESKKGSYVGIHSTGFKDFLLKPELL 63
Query: 59 RAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTAL 118
RAI D GFEHPSEVQ +CIPQAILG D++CQAKSGMGKTAVF L+ L Q P G+V+ +
Sbjct: 64 RAIQDCGFEHPSEVQEQCIPQAILGGDIVCQAKSGMGKTAVFALAVLHQLVPEDGKVSCV 123
Query: 119 VLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRIL 178
VL HTRELAYQI HEFERFS YLP+++ AV YGGV IK H D LK P IVVGTPGR+L
Sbjct: 124 VLGHTRELAYQIAHEFERFSKYLPNVRTAVLYGGVPIKQHIDRLKQSPPHIVVGTPGRVL 183
Query: 179 ALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRP 238
L+R K L + +V+ F+LDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIR
Sbjct: 184 DLSRRKALDISSVQFFVLDECDKMLEQLDMRRDVQEIFRMTPHNKQVMMFSATLSKEIRN 243
Query: 239 VCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSV 298
VCKKF+ +PME+YVDDEAKLTLHGL+Q+Y+KL E EKNRKL DLLD L+FNQVVIFVKSV
Sbjct: 244 VCKKFLSNPMEVYVDDEAKLTLHGLLQYYLKLEEQEKNRKLMDLLDTLEFNQVVIFVKSV 303
Query: 299 SRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVN 358
RA LNKLLVE NFPSI IHS M+Q ER++RY+ FK+ KR+LVATD+ RGIDIERVN
Sbjct: 304 QRANALNKLLVEYNFPSIAIHSSMAQSERISRYQMFKDFQKRLLVATDIFARGIDIERVN 363
Query: 359 IVINYDMPD----------SADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV-SKF 407
IVINYDMPD AD YLHRVGRAGRFGTKGLAI+F+SS D+D+LN+V S+F
Sbjct: 364 IVINYDMPDLKGPEATAKTGADAYLHRVGRAGRFGTKGLAISFISSKEDNDVLNEVQSRF 423
>gi|195434048|ref|XP_002065015.1| GK14902 [Drosophila willistoni]
gi|194161100|gb|EDW76001.1| GK14902 [Drosophila willistoni]
Length = 424
Score = 583 bits (1503), Expect = e-164, Method: Compositional matrix adjust.
Identities = 283/396 (71%), Positives = 329/396 (83%), Gaps = 2/396 (0%)
Query: 11 DELLDYEEEDAQAPDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHP 69
D+LLDYE+E+ +V + + KG YV IHSSGFRDFLLKPE+LRAIVD GFEHP
Sbjct: 5 DDLLDYEDEEQTETTAVENREAPKKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCGFEHP 64
Query: 70 SEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVT-ALVLCHTRELAY 128
SEVQHECIPQA+LGMD++CQAKSGMGKTAVFVL+TLQQ EP+ LV+CHTRELA+
Sbjct: 65 SEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSDNNTCHVLVMCHTRELAF 124
Query: 129 QICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSL 188
QI E+ERFS Y+P +KVAVF+GG+ I+ ++ LK+ P IVVGTPGRILAL R+K L+L
Sbjct: 125 QISKEYERFSKYMPTVKVAVFFGGLAIQKDEETLKSGTPHIVVGTPGRILALIRNKKLNL 184
Query: 189 KNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPM 248
K+++HF+LDECDKMLE LDMRRDVQEIF+ TPH KQVMMFSATLSK+IRPVCKKFMQDPM
Sbjct: 185 KHLKHFVLDECDKMLEQLDMRRDVQEIFRSTPHGKQVMMFSATLSKDIRPVCKKFMQDPM 244
Query: 249 EIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLL 308
E+YVDDEAKLTLHGL QHY L E EKN+KL +LLD L+FNQVVIFVKSV R L +LL
Sbjct: 245 EVYVDDEAKLTLHGLQQHYNNLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCVALAQLL 304
Query: 309 VECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDS 368
E NFP+I IH GMSQEERL RY+ FK+ KRILVAT+L GRG+DIERVNIV NYDMP+
Sbjct: 305 TEQNFPAIGIHRGMSQEERLNRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPED 364
Query: 369 ADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
+DTYLHRV RAGRFGTKGLAITFVS +D+ ILN+V
Sbjct: 365 SDTYLHRVARAGRFGTKGLAITFVSDENDAKILNEV 400
>gi|313221766|emb|CBY38854.1| unnamed protein product [Oikopleura dioica]
gi|313233364|emb|CBY24478.1| unnamed protein product [Oikopleura dioica]
Length = 422
Score = 583 bits (1503), Expect = e-164, Method: Compositional matrix adjust.
Identities = 277/390 (71%), Positives = 326/390 (83%), Gaps = 1/390 (0%)
Query: 10 EDELLDYEEEDAQ-APDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEH 68
+++LLDY+EE A+ P + + + GYV IHSSGFRDFLLKPELLRAIVD GFEH
Sbjct: 3 DEDLLDYDEEQAEETPVAAVDEKKKDGKGPGYVSIHSSGFRDFLLKPELLRAIVDCGFEH 62
Query: 69 PSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAY 128
PS+VQ+ECIPQA+LGMDV+CQAKSGMGKTAVFVL+TLQQ EP G V+ +V+CHTRELA+
Sbjct: 63 PSQVQNECIPQAVLGMDVLCQAKSGMGKTAVFVLATLQQLEPVDGNVSVIVMCHTRELAF 122
Query: 129 QICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSL 188
QI E+ERFS Y+ +KVAVF+GG+ I+ K +LK CP IVVGTPGRIL L R K LSL
Sbjct: 123 QISKEYERFSKYMDSMKVAVFFGGMPIEKDKKVLKENCPHIVVGTPGRILGLIRSKALSL 182
Query: 189 KNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPM 248
KNV+HF+LDECDKML++LDMRRDVQEIF+ TPH+KQVMMFSATLSKE+RPVCKKFMQDPM
Sbjct: 183 KNVKHFVLDECDKMLDALDMRRDVQEIFRQTPHEKQVMMFSATLSKEVRPVCKKFMQDPM 242
Query: 249 EIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLL 308
E+++DDEAKLTLHGL QHY+K+ E EKNRKL DLLDAL+FNQVVIFVKSV R L+ LL
Sbjct: 243 EVFIDDEAKLTLHGLQQHYVKIKENEKNRKLFDLLDALEFNQVVIFVKSVQRCIALSTLL 302
Query: 309 VECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDS 368
E NFP++ IH M+QEERL RY+ FK +RILVAT+L GRG+DIERVNIV NYDMP+
Sbjct: 303 KEQNFPAVDIHRAMNQEERLQRYQLFKNFQRRILVATNLFGRGMDIERVNIVFNYDMPED 362
Query: 369 ADTYLHRVGRAGRFGTKGLAITFVSSASDS 398
+DTYLHRV RAGRFGTKGLAI+FVS D+
Sbjct: 363 SDTYLHRVARAGRFGTKGLAISFVSDEEDA 392
>gi|393906277|gb|EJD74236.1| spliceosome RNA helicase BAT1 [Loa loa]
Length = 426
Score = 583 bits (1502), Expect = e-164, Method: Compositional matrix adjust.
Identities = 281/400 (70%), Positives = 325/400 (81%), Gaps = 5/400 (1%)
Query: 10 EDELLDYEEEDAQAPDSVATKANGEAAKK----GYVGIHSSGFRDFLLKPELLRAIVDSG 65
ED+LLDYEEE + D + NG A K Y IHSSGFRDFLLKPELLRAIVD G
Sbjct: 3 EDQLLDYEEEQEETTDGNKAE-NGSATDKKIKGTYASIHSSGFRDFLLKPELLRAIVDCG 61
Query: 66 FEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRE 125
FEHPSEVQHECIPQAILGMD++CQAKSGMGKTAVFVL+TLQQ EP G+V+ LV+CHTRE
Sbjct: 62 FEHPSEVQHECIPQAILGMDIVCQAKSGMGKTAVFVLATLQQLEPVDGEVSVLVMCHTRE 121
Query: 126 LAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKD 185
LA+QI E+ERFS Y+P +++AVF+GG+ IK ++ LKN P IVVGTPGR L LAR
Sbjct: 122 LAFQISKEYERFSKYIPGVRIAVFFGGIPIKKDEETLKNNTPHIVVGTPGRTLQLARQGS 181
Query: 186 LSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQ 245
L LKN+++F+LDECDKM+ DMRRDVQEI KMTP +KQVMMFSATL +++R VCKKFMQ
Sbjct: 182 LKLKNIKYFVLDECDKMIGDNDMRRDVQEIVKMTPQEKQVMMFSATLPRDLRVVCKKFMQ 241
Query: 246 DPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELN 305
DPME+YVDDEAKLTLHGL QHY+KL E EKN+KL +LLD L+FNQVVIFV+SV R L+
Sbjct: 242 DPMEVYVDDEAKLTLHGLQQHYVKLKETEKNKKLLELLDQLEFNQVVIFVRSVQRCGALH 301
Query: 306 KLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDM 365
LL E NFPSI IH GM QEERL+RY+ FK+ KRILVAT+L GRG+DIERVNIV NYDM
Sbjct: 302 TLLSEQNFPSIAIHRGMPQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDM 361
Query: 366 PDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVS 405
P+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN V
Sbjct: 362 PEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQ 401
>gi|402593902|gb|EJW87829.1| spliceosome RNA helicase BAT1 [Wuchereria bancrofti]
Length = 424
Score = 582 bits (1501), Expect = e-164, Method: Compositional matrix adjust.
Identities = 281/400 (70%), Positives = 325/400 (81%), Gaps = 5/400 (1%)
Query: 10 EDELLDYEEEDAQAPDSVATKANGEAAKK----GYVGIHSSGFRDFLLKPELLRAIVDSG 65
ED+LLDYEEE + D + NG A K Y IHSSGFRDFLLKPELLRAIVD G
Sbjct: 3 EDQLLDYEEEQEETTDGNKAE-NGSATDKKIKGTYASIHSSGFRDFLLKPELLRAIVDCG 61
Query: 66 FEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRE 125
FEHPSEVQHECIPQAILGMD++CQAKSGMGKTAVFVL+TLQQ EP G+V+ LV+CHTRE
Sbjct: 62 FEHPSEVQHECIPQAILGMDIVCQAKSGMGKTAVFVLATLQQLEPVDGEVSVLVMCHTRE 121
Query: 126 LAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKD 185
LA+QI E+ERFS Y+P +++AVF+GG+ IK ++ LKN P IVVGTPGR L LAR
Sbjct: 122 LAFQISKEYERFSKYIPGVRIAVFFGGIPIKKDEETLKNNTPHIVVGTPGRTLQLARQGS 181
Query: 186 LSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQ 245
L LKN+++F+LDECDKM+ DMRRDVQEI KMTP +KQVMMFSATL +++R VCKKFMQ
Sbjct: 182 LKLKNIKYFVLDECDKMIGDNDMRRDVQEIVKMTPQEKQVMMFSATLPRDLRVVCKKFMQ 241
Query: 246 DPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELN 305
DPME+YVDDEAKLTLHGL QHY+KL E EKN+KL +LLD L+FNQVVIFV+SV R L+
Sbjct: 242 DPMEVYVDDEAKLTLHGLQQHYVKLKETEKNKKLLELLDQLEFNQVVIFVRSVQRCGALH 301
Query: 306 KLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDM 365
LL E NFPSI IH GM QEERL+RY+ FK+ KRILVAT+L GRG+DIERVNIV NYDM
Sbjct: 302 TLLSEQNFPSIAIHRGMPQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDM 361
Query: 366 PDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVS 405
P+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN V
Sbjct: 362 PEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQ 401
>gi|336374429|gb|EGO02766.1| hypothetical protein SERLA73DRAFT_150394 [Serpula lacrymans var.
lacrymans S7.3]
Length = 2522
Score = 582 bits (1500), Expect = e-163, Method: Compositional matrix adjust.
Identities = 285/419 (68%), Positives = 334/419 (79%), Gaps = 18/419 (4%)
Query: 4 TRDNEYEDELLDYEEED------AQAPDS----VATKANGEA--AKKGYVGIHSSGFRDF 51
+ DNE +L+DYE+E+ A P S +AT +GE KK + GIHS+GFRDF
Sbjct: 3 SHDNE---DLIDYEDENDLPTNGAAVPSSNGAALATAVDGEGDKEKKNFSGIHSTGFRDF 59
Query: 52 LLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPN 111
LLKPELLRAI D GFEHPSEVQ ECIPQA+LGMDV+CQAKSG GKTAVFVL+TLQQ EP
Sbjct: 60 LLKPELLRAISDLGFEHPSEVQQECIPQAVLGMDVLCQAKSGHGKTAVFVLATLQQLEPV 119
Query: 112 PGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL--KNECPQI 169
G+V+ LVLCHTRELA+QI +E+ RF+ Y+PD++V+ FYGG + ++L K +CP I
Sbjct: 120 NGEVSVLVLCHTRELAFQIKNEYTRFAKYMPDVRVSTFYGGTPVAKDSEILRDKTKCPHI 179
Query: 170 VVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFS 229
VV TPGR+ ALARDK L KNV+HF+LDECDKMLE LDMRRDVQEIF+ TPH KQVMMFS
Sbjct: 180 VVATPGRLNALARDKVLDAKNVKHFVLDECDKMLEQLDMRRDVQEIFRATPHHKQVMMFS 239
Query: 230 ATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFN 289
ATL+KEIR CKKFM +P+EI+VDDE KLTLHGL QHY+KL E KNRKLN+LLD L+FN
Sbjct: 240 ATLAKEIRVTCKKFMANPLEIFVDDETKLTLHGLQQHYVKLEETGKNRKLNELLDTLEFN 299
Query: 290 QVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVG 349
QVVIFVKSV+RA EL+KLLV CNFPSI IHSG+ QEER+ RY FK KRILVATD+ G
Sbjct: 300 QVVIFVKSVARAIELDKLLVSCNFPSISIHSGLQQEERIKRYTAFKAFEKRILVATDIFG 359
Query: 350 RGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV-SKF 407
RGID+ERVNIV+NYD P AD+YLHRVGRAGRFGTKGLAIT VSS SD ++ + S+F
Sbjct: 360 RGIDVERVNIVVNYDCPPDADSYLHRVGRAGRFGTKGLAITCVSSESDQQVMAAIQSRF 418
>gi|409083278|gb|EKM83635.1| hypothetical protein AGABI1DRAFT_110279 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426201670|gb|EKV51593.1| hypothetical protein AGABI2DRAFT_189825 [Agaricus bisporus var.
bisporus H97]
Length = 439
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 282/414 (68%), Positives = 333/414 (80%), Gaps = 17/414 (4%)
Query: 11 DELLDYEEEDAQAPDSVATKA--NGEAA------------KKGYVGIHSSGFRDFLLKPE 56
D+L+DYE+E P+S AT A NG A KK + GIHS+GF+DFLLKPE
Sbjct: 7 DDLIDYEDEHDLVPNSGATAAGTNGAPATGAVAGGDNDKDKKTFSGIHSTGFKDFLLKPE 66
Query: 57 LLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVT 116
LLRAI D GFEHPSEVQ ECIPQA+LGMDV+CQAKSG GKTAVFVL+TLQQ EP G+V+
Sbjct: 67 LLRAISDLGFEHPSEVQQECIPQAVLGMDVLCQAKSGHGKTAVFVLATLQQLEPVNGEVS 126
Query: 117 ALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL--KNECPQIVVGTP 174
+VLCHTRELA+QI +E+ RF+ Y+PD++V+ FYGG + ++L KN+CP IVV TP
Sbjct: 127 VIVLCHTRELAFQIKNEYTRFAKYMPDVRVSTFYGGTPVAKDAEILRDKNKCPHIVVATP 186
Query: 175 GRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSK 234
GR+ ALARDK L KNV+HF+LDECDKMLE LDMRRDVQEIF+ TPH KQVMMFSATL+K
Sbjct: 187 GRLNALARDKVLDAKNVKHFVLDECDKMLEQLDMRRDVQEIFRATPHHKQVMMFSATLAK 246
Query: 235 EIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIF 294
EIR CKKFM +P+EI+VDDE KLTLHGL QHY+KL E++KNRKLNDLLD L+FNQVVIF
Sbjct: 247 EIRVTCKKFMANPLEIFVDDETKLTLHGLQQHYVKLEEVQKNRKLNDLLDTLEFNQVVIF 306
Query: 295 VKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDI 354
VKSV+R EL+KLLV CNFPSI IHSG++QEER+ RY FK KRILVATD+ GRGID+
Sbjct: 307 VKSVARCIELDKLLVSCNFPSISIHSGLTQEERINRYTAFKAFEKRILVATDIFGRGIDV 366
Query: 355 ERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV-SKF 407
ERVNIV+NYD P D+YLHRVGRAGRFGTKGLAITFV+S SD ++ + S+F
Sbjct: 367 ERVNIVVNYDCPPDPDSYLHRVGRAGRFGTKGLAITFVTSESDQQVMAAIQSRF 420
>gi|198476804|ref|XP_001357483.2| GA20225 [Drosophila pseudoobscura pseudoobscura]
gi|198137859|gb|EAL34553.2| GA20225 [Drosophila pseudoobscura pseudoobscura]
Length = 424
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 284/400 (71%), Positives = 329/400 (82%), Gaps = 8/400 (2%)
Query: 11 DELLDYEEEDAQAPDSVATKANGEAAKKG----YVGIHSSGFRDFLLKPELLRAIVDSGF 66
D+LLDYE+E+ +V N EA KK YV IHSSGFRDFLLKPE+LRAIVD GF
Sbjct: 5 DDLLDYEDEEQTETTAVE---NQEAPKKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCGF 61
Query: 67 EHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVT-ALVLCHTRE 125
EHPSEVQHECIPQA+LGMD++CQAKSGMGKTAVFVL+TLQQ EP LV+CHTRE
Sbjct: 62 EHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPADNNTCHVLVMCHTRE 121
Query: 126 LAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKD 185
LA+QI E+ERFS Y+P +KVAVF+GG+ I+ ++ LK+ P IVVGTPGRILAL R+K
Sbjct: 122 LAFQISKEYERFSKYMPTVKVAVFFGGLAIQKDEETLKSGTPHIVVGTPGRILALIRNKK 181
Query: 186 LSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQ 245
L+LK+++HF+LDECDKMLE LDMRRDVQEIF+ +PH KQVMMFSATLSK+IRPVCKKFMQ
Sbjct: 182 LNLKHLKHFVLDECDKMLEQLDMRRDVQEIFRSSPHGKQVMMFSATLSKDIRPVCKKFMQ 241
Query: 246 DPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELN 305
DPME+YVDDEAKLTLHGL QHY+ L E EKN+KL +LLD L+FNQVVIFVKSV R L
Sbjct: 242 DPMEVYVDDEAKLTLHGLQQHYVNLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCVALA 301
Query: 306 KLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDM 365
LL E NFP+I IH GM+QEERL RY+ FK+ KRILVAT+L GRG+DIERVNIV NYDM
Sbjct: 302 MLLTEQNFPAIGIHRGMTQEERLNRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDM 361
Query: 366 PDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVS 405
P+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN+V
Sbjct: 362 PEDSDTYLHRVARAGRFGTKGLAITFVSDDNDAKILNEVQ 401
>gi|409051252|gb|EKM60728.1| hypothetical protein PHACADRAFT_246819 [Phanerochaete carnosa
HHB-10118-sp]
Length = 437
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 286/417 (68%), Positives = 336/417 (80%), Gaps = 18/417 (4%)
Query: 6 DNEYEDELLDYEEED--------AQAPDSVATK---ANGEAA-KKGYVGIHSSGFRDFLL 53
DNE EL+DYE+E A A ++V A+G A KK + GIHS+GFRDFLL
Sbjct: 5 DNE---ELIDYEDEHDVVANGAPAHAANAVTVSQPAADGVAEDKKNFSGIHSTGFRDFLL 61
Query: 54 KPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPG 113
KPELLRAI D GFEHPSEVQ ECIPQA+LGMDV+CQAKSG GKTAVFVL+TLQQ EP G
Sbjct: 62 KPELLRAISDLGFEHPSEVQQECIPQAVLGMDVLCQAKSGHGKTAVFVLATLQQLEPVNG 121
Query: 114 QVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL--KNECPQIVV 171
+V+ LV+CHTRELA+QI +E+ RF+ Y+PD++++ F+GG+ I K LL K++CP IVV
Sbjct: 122 EVSVLVMCHTRELAFQIKNEYTRFAKYMPDVRISTFFGGIGIDKDKALLVDKSKCPHIVV 181
Query: 172 GTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSAT 231
GTPGR+ AL RDK L V+HF+LDECDKMLE LDMRRDVQEIF+ TPH KQVMMFSAT
Sbjct: 182 GTPGRLNALVRDKSLDASKVKHFVLDECDKMLEQLDMRRDVQEIFRATPHHKQVMMFSAT 241
Query: 232 LSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQV 291
L+KEIR CKKFMQ+P+EI+VDDE KLTLHGL QHY+KL E+ KNRKLN+LLD L+FNQV
Sbjct: 242 LAKEIRVTCKKFMQNPLEIFVDDETKLTLHGLQQHYVKLEEIGKNRKLNELLDTLEFNQV 301
Query: 292 VIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRG 351
VIFVKSV+RA EL+KLLV CNFPSI IHSG+ QEER+ RY FK KRILVATD+ GRG
Sbjct: 302 VIFVKSVARAIELDKLLVSCNFPSISIHSGLGQEERIARYTAFKAFEKRILVATDIFGRG 361
Query: 352 IDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV-SKF 407
ID+ERVNIV+NYD P AD+YLHRVGRAGRFGTKGLAITFVSS SD ++ Q+ S+F
Sbjct: 362 IDVERVNIVVNYDCPPDADSYLHRVGRAGRFGTKGLAITFVSSESDQQVMAQIQSRF 418
>gi|388856284|emb|CCF50093.1| probable ATP-dependent RNA helicase [Ustilago hordei]
Length = 431
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 279/411 (67%), Positives = 333/411 (81%), Gaps = 12/411 (2%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAAKK------GYVGIHSSGFRDFLLKPELLR 59
DNE +L+DYEEE A AP S A A YVGIHS+GFRDFLLKPELLR
Sbjct: 5 DNE---DLIDYEEEVAVAPSSTTNAAAAATADADKDKKGSYVGIHSTGFRDFLLKPELLR 61
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
AI D GFEHPSEVQ ECIPQ+ILGMDV+CQAKSGMGKTAVFVL+TLQQ EP G+V+ LV
Sbjct: 62 AISDLGFEHPSEVQQECIPQSILGMDVVCQAKSGMGKTAVFVLATLQQIEPVDGEVSVLV 121
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRI 177
LCHTRELAYQI +E+ RF+ Y+PD++ V YGG + ++ +LK++ CP I+VGTPGR+
Sbjct: 122 LCHTRELAYQIRNEYHRFTKYMPDVRTGVIYGGTPVAENQAMLKDKSKCPHILVGTPGRM 181
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
AL RDK L + V+HF++DECDK+LE +DMRRDVQ+IF+ TPH KQVMMFSATL+KE+R
Sbjct: 182 NALVRDKSLKVSGVKHFVIDECDKILEQVDMRRDVQDIFRATPHHKQVMMFSATLAKEVR 241
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 297
P CKKFMQ+P+EIYVDDE KLTLHGL QHY++L E KNRKLNDLLD+L+FNQV+IFVKS
Sbjct: 242 PTCKKFMQNPLEIYVDDETKLTLHGLQQHYVRLEESAKNRKLNDLLDSLEFNQVIIFVKS 301
Query: 298 VSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERV 357
+SRA EL+KLL ECNFPSICIH G+ QEER+ RY+ FK KRILVATD+ GRGID+ERV
Sbjct: 302 ISRANELDKLLRECNFPSICIHGGLGQEERIKRYQQFKNFEKRILVATDIFGRGIDVERV 361
Query: 358 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV-SKF 407
N+ I+YD P AD+YLHRVGRAGRFGTKGLAI FVSS D+++L Q+ S+F
Sbjct: 362 NVSISYDTPSDADSYLHRVGRAGRFGTKGLAIMFVSSDEDAEVLKQIQSRF 412
>gi|223634713|sp|A5DDN0.3|SUB2_PICGU RecName: Full=ATP-dependent RNA helicase SUB2
Length = 432
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 279/416 (67%), Positives = 337/416 (81%), Gaps = 8/416 (1%)
Query: 8 EYEDELLDYEEED-----AQAPDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAI 61
E ++ELLDY + + + AP++ A A+ +A KKG YVGIH++GFRDFLLKPELLRAI
Sbjct: 4 EGQEELLDYSDSEEIAVPSNAPEAGADGADKDADKKGSYVGIHATGFRDFLLKPELLRAI 63
Query: 62 VDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLC 121
D GFEHPSEVQ CIPQ+ILG DV+CQAKSG+GKTAVFVLSTLQQ +P PG++T LV+C
Sbjct: 64 GDCGFEHPSEVQQVCIPQSILGTDVLCQAKSGLGKTAVFVLSTLQQLDPVPGEITTLVIC 123
Query: 122 HTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILA 179
HTRELAYQI +E+ RFS Y+PD+K VFYGG+ I + LKN+ CP IVV TPGR+ A
Sbjct: 124 HTRELAYQIRNEYARFSKYMPDVKTEVFYGGIPIAKDIEKLKNKDTCPHIVVATPGRLHA 183
Query: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
L +K + L NV+ F++DECDK+LE++DMRRDVQ+IF+ TPH KQVMMFSATLS+EIRPV
Sbjct: 184 LVEEKAIRLNNVKSFVIDECDKVLEAIDMRRDVQDIFRNTPHQKQVMMFSATLSQEIRPV 243
Query: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 299
CKKFMQ+P+EIYVDDEAKLTLHGL Q+Y+KL E EKNRKL DLLD+L+FNQV+IFVKS S
Sbjct: 244 CKKFMQNPLEIYVDDEAKLTLHGLQQYYLKLDEKEKNRKLADLLDSLEFNQVIIFVKSTS 303
Query: 300 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNI 359
RA ELNKLLV NFPSI +HS M QEER+ RYK FKE NKRI V+TD+ GRGIDIER+N+
Sbjct: 304 RANELNKLLVASNFPSIAVHSAMPQEERIARYKSFKEFNKRICVSTDVFGRGIDIERINL 363
Query: 360 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKFMFLLIGSF 415
INYD+P+ AD YLHRVGRAGRFGTKGLAI+FV S D ++L ++ + I F
Sbjct: 364 AINYDLPNEADQYLHRVGRAGRFGTKGLAISFVGSKEDEEVLEKIQSRFDVKITEF 419
>gi|392597062|gb|EIW86384.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coniophora puteana RWD-64-598 SS2]
Length = 435
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 283/415 (68%), Positives = 330/415 (79%), Gaps = 16/415 (3%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAA----------KKGYVGIHSSGFRDFLLKP 55
DNE EL+DYE+E P+ + +NG A KK + GIH++GFRDFLLKP
Sbjct: 5 DNE---ELIDYEDEHDVVPNGGVSASNGAVAGGVADGEEKDKKNFSGIHATGFRDFLLKP 61
Query: 56 ELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQV 115
ELLRAI D GFEHPSEVQ ECIPQA+LGMDV+CQAKSG GKTAVFVL+TLQQ EP G+V
Sbjct: 62 ELLRAISDLGFEHPSEVQQECIPQAVLGMDVLCQAKSGHGKTAVFVLATLQQLEPVNGEV 121
Query: 116 TALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL--KNECPQIVVGT 173
+ LVLCHTRELA+QI +E+ RF+ Y+PD++V+ FYGG + + L K++CP IVV T
Sbjct: 122 SVLVLCHTRELAFQIKNEYSRFAKYMPDVRVSTFYGGTPVTKDAETLRDKSKCPHIVVAT 181
Query: 174 PGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLS 233
PGR+ AL RDK L KNV+HF+LDECDKMLE LDMRRDVQEIF+ TPH KQVMMFSATL+
Sbjct: 182 PGRLNALVRDKVLDAKNVKHFVLDECDKMLEQLDMRRDVQEIFRSTPHHKQVMMFSATLA 241
Query: 234 KEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVI 293
KEIR CKKFM +P+EI+VDDE KLTLHGL QHY+KL E KNRKLN+LLD L+FNQVVI
Sbjct: 242 KEIRVTCKKFMANPLEIFVDDETKLTLHGLQQHYVKLDESAKNRKLNELLDTLEFNQVVI 301
Query: 294 FVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGID 353
FVKSV+RA EL+KLLV CNFPSI IHSG+ QEER+ RY FK KRILVATD+ GRGID
Sbjct: 302 FVKSVARAIELDKLLVSCNFPSISIHSGLQQEERINRYSAFKAFEKRILVATDIFGRGID 361
Query: 354 IERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV-SKF 407
+ERVNIVINYD P AD+YLHRVGRAGRFGTKGLAITFVSS SD ++ + S+F
Sbjct: 362 VERVNIVINYDSPPDADSYLHRVGRAGRFGTKGLAITFVSSESDQQVMAAIQSRF 416
>gi|71982858|ref|NP_001021985.1| Protein HEL-1, isoform a [Caenorhabditis elegans]
gi|2500533|sp|Q18212.1|DX39B_CAEEL RecName: Full=Spliceosome RNA helicase DDX39B homolog; AltName:
Full=DEAD box protein UAP56
gi|3874509|emb|CAA91120.1| Protein HEL-1, isoform a [Caenorhabditis elegans]
Length = 425
Score = 580 bits (1494), Expect = e-163, Method: Compositional matrix adjust.
Identities = 280/398 (70%), Positives = 325/398 (81%), Gaps = 2/398 (0%)
Query: 10 EDELLDYEEEDAQAPDSVATKANGEAAK-KG-YVGIHSSGFRDFLLKPELLRAIVDSGFE 67
E++LLDYEEE + D G+A K KG Y IHSSGFRDFLLKPE+LRAI D GFE
Sbjct: 3 EEQLLDYEEEQEEIQDKQPEVGGGDARKTKGTYASIHSSGFRDFLLKPEILRAIGDCGFE 62
Query: 68 HPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELA 127
HPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFV++TLQQ EP G+V+ + +CHTRELA
Sbjct: 63 HPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELA 122
Query: 128 YQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLS 187
+QI E+ERFS YLP +KVAVF+GG+ IK ++ L N+CP IVVGTPGR+LALAR L
Sbjct: 123 FQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIVVGTPGRMLALARSGKLK 182
Query: 188 LKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDP 247
L V++F+LDECDKM+ DMRRDVQEI KMTP KQVMMFSATL KE+R VCK+FMQDP
Sbjct: 183 LDKVKYFVLDECDKMIGDADMRRDVQEIVKMTPQQKQVMMFSATLPKELRTVCKRFMQDP 242
Query: 248 MEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKL 307
ME+YVDDEAKLTLHGL QHY+KL E EKNR+L +LLDAL+FNQVVIFVK+V R L++L
Sbjct: 243 MEVYVDDEAKLTLHGLQQHYVKLKEAEKNRRLLNLLDALEFNQVVIFVKAVKRCEALHQL 302
Query: 308 LVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPD 367
L E NFPSI IH M+QEERL+RY+ FK+ KRILVATDL GRG+DIERVNIV NYDMP+
Sbjct: 303 LTEQNFPSIAIHRQMAQEERLSRYQAFKDFQKRILVATDLFGRGMDIERVNIVFNYDMPE 362
Query: 368 SADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVS 405
+D+YLHRV RAGRFGTKGLAITFVS +D+ LN V
Sbjct: 363 DSDSYLHRVARAGRFGTKGLAITFVSDENDAKTLNSVQ 400
>gi|402220874|gb|EJU00944.1| ATP-dependent RNA helicase SUB2 [Dacryopinax sp. DJM-731 SS1]
Length = 444
Score = 580 bits (1494), Expect = e-163, Method: Compositional matrix adjust.
Identities = 280/383 (73%), Positives = 325/383 (84%), Gaps = 3/383 (0%)
Query: 28 ATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVI 87
A + + E KKG+ IHS+GFRDFLLK ELLRAI + GFEHPSEVQ ECIPQA+LGMDV+
Sbjct: 41 AGEEDVEDEKKGFGTIHSTGFRDFLLKLELLRAISELGFEHPSEVQQECIPQAVLGMDVL 100
Query: 88 CQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVA 147
CQAKSG GKTAVFVL+TLQQ EP G+VT LV+CHTRELAYQI +E+ RFS Y+PDI+ A
Sbjct: 101 CQAKSGHGKTAVFVLATLQQLEPVDGEVTVLVMCHTRELAYQIKNEYGRFSKYMPDIRTA 160
Query: 148 VFYGGVNIKIHKDLLK--NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLES 205
VFYGG IK +LLK N CP IVVGTPGR+ AL RD+ L+ V+HF+LDECDKMLE
Sbjct: 161 VFYGGTPIKNDIELLKDKNRCPHIVVGTPGRLNALVRDRVLNPSTVKHFVLDECDKMLEQ 220
Query: 206 LDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQ 265
LDMRRDVQEIF+ TPH KQVMMFSATLSKE+R CKKFMQ+P+EI+VDDEAKLTLHGL Q
Sbjct: 221 LDMRRDVQEIFRATPHHKQVMMFSATLSKEVRITCKKFMQNPLEIFVDDEAKLTLHGLQQ 280
Query: 266 HYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQE 325
HY++L E +KNRKLNDLLD L+FNQV IFVKSV+RA EL+KLLVEC FPSICIHSG+ QE
Sbjct: 281 HYVRLEESQKNRKLNDLLDTLEFNQVCIFVKSVARANELDKLLVECGFPSICIHSGLPQE 340
Query: 326 ERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTK 385
ER+ RY+ FK+ KRILVATD+ GRGID+ERVNIVINYDMP AD+YLHRVGRAGRFGTK
Sbjct: 341 ERIKRYQQFKQFEKRILVATDIFGRGIDVERVNIVINYDMPTDADSYLHRVGRAGRFGTK 400
Query: 386 GLAITFVSSASDSDILNQV-SKF 407
GLAITFV++ +D++IL Q+ S+F
Sbjct: 401 GLAITFVANDADAEILKQIQSRF 423
>gi|91083251|ref|XP_974045.1| PREDICTED: similar to DEAD box ATP-dependent RNA helicase
[Tribolium castaneum]
gi|270007718|gb|EFA04166.1| hypothetical protein TcasGA2_TC014413 [Tribolium castaneum]
Length = 425
Score = 579 bits (1493), Expect = e-163, Method: Compositional matrix adjust.
Identities = 289/399 (72%), Positives = 334/399 (83%), Gaps = 5/399 (1%)
Query: 11 DELLDYEEEDAQAPDSVATKANGEAAKKG----YVGIHSSGFRDFLLKPELLRAIVDSGF 66
D+LLDYE+E+ +VA KKG YV IHSSGFRDFLLKPE+LRAIVD GF
Sbjct: 5 DDLLDYEDEE-NPEQTVAETVGAGDQKKGIKGTYVSIHSSGFRDFLLKPEILRAIVDCGF 63
Query: 67 EHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTREL 126
EHPSEVQHECIPQA+LGMD++CQAKSGMGKTAVFVL+TLQQ EP V LV+CHTREL
Sbjct: 64 EHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPTENVVYVLVMCHTREL 123
Query: 127 AYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDL 186
A+QI E+ERFS Y+P+IKV VF+GG++I+ +++LKN CP IVVGTPGRILAL R K L
Sbjct: 124 AFQISKEYERFSKYMPNIKVGVFFGGLSIQKDEEVLKNNCPHIVVGTPGRILALVRSKKL 183
Query: 187 SLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQD 246
+LK+++HFILDECDKMLE LDMRRDVQEI++ TPH KQVMMFSATLSKEIRPVCKKFMQD
Sbjct: 184 NLKHLKHFILDECDKMLELLDMRRDVQEIYRNTPHGKQVMMFSATLSKEIRPVCKKFMQD 243
Query: 247 PMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNK 306
PME+YVDDEAKLTLHGL QHY+KL E EKN+KL +LLD L+FNQVVIFVKSV R L +
Sbjct: 244 PMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCIALAQ 303
Query: 307 LLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMP 366
LL E NFP+I IH GM+QEERL+RY+ FK+ KRILVAT+L GRG+DIERVNIV NYDMP
Sbjct: 304 LLTEQNFPAIGIHRGMNQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMP 363
Query: 367 DSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVS 405
+ +DTYLHRV RAGRFGTKGLA+TFVS SD+ ILN+V
Sbjct: 364 EDSDTYLHRVARAGRFGTKGLAVTFVSEESDAKILNEVQ 402
>gi|225683798|gb|EEH22082.1| ATP-dependent RNA helicase sub2 [Paracoccidioides brasiliensis
Pb03]
gi|226293173|gb|EEH48593.1| ATP-dependent RNA helicase SUB2 [Paracoccidioides brasiliensis
Pb18]
Length = 457
Score = 579 bits (1493), Expect = e-163, Method: Compositional matrix adjust.
Identities = 279/420 (66%), Positives = 337/420 (80%), Gaps = 22/420 (5%)
Query: 9 YEDELLDYEEEDAQAPDSVATK-----ANGEAAKK---------------GYVGIHSSGF 48
+E++L+DY +E+ QA D+ AT NG A KK YVGIHS+GF
Sbjct: 3 HEEDLIDYSDEELQATDAAATSIAPTGTNGAALKKEGDLTVSGVRADKKGSYVGIHSTGF 62
Query: 49 RDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQT 108
RDFLLK ELLRAI D GFEHPSEVQ CIP AIL +DV+CQAKSG+GKTAVFVL+TL Q
Sbjct: 63 RDFLLKGELLRAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTLHQL 122
Query: 109 EPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL--KNEC 166
EP PG+ + LV+CHTRELAYQI +E+ RFS YLPD+K AVFYGG ++ +LL K+
Sbjct: 123 EPVPGECSILVMCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPMQKDIELLSSKDNY 182
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
P IVVGTPGR+ AL RDK LSL++++ F+LDECDKML+ +DMRRDVQEIF+ TP DKQVM
Sbjct: 183 PNIVVGTPGRLNALVRDKKLSLRSIKAFVLDECDKMLDQIDMRRDVQEIFRATPADKQVM 242
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
MFSATLS+E+RP+CKKFM++P+E+YVDD+ KLTLHGL+Q+YIKLSE EKNRKLN+LLD+L
Sbjct: 243 MFSATLSQEVRPICKKFMRNPLEVYVDDDTKLTLHGLLQYYIKLSESEKNRKLNELLDSL 302
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
+FNQV+IFVKS RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD
Sbjct: 303 EFNQVIIFVKSTQRATELDKLLRECNFPSIAVHSGVSQEERIKRYKEFKEFNKRICVATD 362
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
+ GRGIDIER+N+ INYD+P AD+YLHRVGRAGRFGTKGLAI+FVSS D ++L + K
Sbjct: 363 VFGRGIDIERINLAINYDLPADADSYLHRVGRAGRFGTKGLAISFVSSEQDQEVLKDIEK 422
>gi|58259249|ref|XP_567037.1| ATP dependent RNA helicase [Cryptococcus neoformans var. neoformans
JEC21]
gi|134107387|ref|XP_777578.1| hypothetical protein CNBA7000 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819535|sp|P0CQ97.1|SUB2_CRYNB RecName: Full=ATP-dependent RNA helicase SUB2
gi|338819536|sp|P0CQ96.1|SUB2_CRYNJ RecName: Full=ATP-dependent RNA helicase SUB2
gi|50260272|gb|EAL22931.1| hypothetical protein CNBA7000 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223174|gb|AAW41218.1| ATP dependent RNA helicase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 442
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 278/404 (68%), Positives = 329/404 (81%), Gaps = 7/404 (1%)
Query: 10 EDELLDYEEEDAQA-PDSVATKANGEAA---KKG-YVGIHSSGFRDFLLKPELLRAIVDS 64
E+EL+DY+E + P + A + NG+ A KKG YVGIHS+GFRDFLLKPELLRAI D
Sbjct: 18 EEELVDYDEAAEEILPPAPAAETNGDKADGDKKGSYVGIHSTGFRDFLLKPELLRAISDL 77
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFEHPSEVQ ECIPQAILG DV+CQAKSGMGKTAVFVL+ LQQ EP G+V+ ++LCHTR
Sbjct: 78 GFEHPSEVQQECIPQAILGTDVLCQAKSGMGKTAVFVLAALQQIEPVDGEVSIIILCHTR 137
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALAR 182
ELAYQI +EF RFS ++ +++ VFYGG I +++L N+ CP IVVGTPGR +AL R
Sbjct: 138 ELAYQIKNEFTRFSKFMTNVRTGVFYGGTPISADQEILANKEKCPHIVVGTPGRTMALVR 197
Query: 183 DKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKK 242
DK L+ V+HF+LDECDKMLE LDMRRDVQEIF+ TPH KQVMMFSATLSK+IR CKK
Sbjct: 198 DKKLNASKVKHFVLDECDKMLEQLDMRRDVQEIFRATPHHKQVMMFSATLSKDIRATCKK 257
Query: 243 FMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAA 302
FMQ P+EIYVDDE KLTLHGL Q Y+KL E EKNRKLNDLLD L+FNQV IFVKSV RA
Sbjct: 258 FMQSPLEIYVDDETKLTLHGLQQFYLKLEEREKNRKLNDLLDNLEFNQVCIFVKSVQRAT 317
Query: 303 ELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVIN 362
+L+ LL ECNFPSICIHSG+ Q ER++R++ FK KRILVATD+ GRGID+ERVN+VIN
Sbjct: 318 QLDALLQECNFPSICIHSGLQQAERISRFQQFKAFEKRILVATDIFGRGIDVERVNVVIN 377
Query: 363 YDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
YD P AD+YLHRVGRAGRFGTKGLAI+FVSS +D ++L ++ +
Sbjct: 378 YDAPSDADSYLHRVGRAGRFGTKGLAISFVSSDADQEVLQRIQE 421
>gi|238881797|gb|EEQ45435.1| ATP-dependent RNA helicase SUB2 [Candida albicans WO-1]
Length = 433
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 280/419 (66%), Positives = 339/419 (80%), Gaps = 11/419 (2%)
Query: 7 NEYEDELLDYEEEDAQAPDSVATKANGEAA-------KKG-YVGIHSSGFRDFLLKPELL 58
+E ++ELLDY + + A S T+A+GEA KKG YVGIH++GFRDFLLKPELL
Sbjct: 3 HEGQEELLDYSDSEEIAV-STTTQASGEAQSNDKESDKKGSYVGIHATGFRDFLLKPELL 61
Query: 59 RAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTAL 118
RAI D GFEHPSEVQ CIPQ+ILG DV+CQAKSG+GKTAVFVLSTLQQ +P PG+++ L
Sbjct: 62 RAIGDCGFEHPSEVQQVCIPQSILGTDVLCQAKSGLGKTAVFVLSTLQQLDPVPGEISTL 121
Query: 119 VLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGR 176
V+CHTRELAYQI +E+ RFS Y+PD+K VFYGG IK + LKN+ CP IVV TPGR
Sbjct: 122 VICHTRELAYQIRNEYARFSKYMPDVKTDVFYGGTPIKRDIEKLKNKDTCPHIVVATPGR 181
Query: 177 ILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEI 236
+ AL +K + L NV+ F++DECDK+LES+DMRRDVQ+IF+ TPH KQVMMFSATLS++I
Sbjct: 182 LHALVEEKAIRLNNVKSFVIDECDKVLESIDMRRDVQDIFRATPHQKQVMMFSATLSQDI 241
Query: 237 RPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVK 296
RPVCKKFMQ+P+EIYVDDEAKLTLHGL Q+YIKL E EKNRKL+DLLD+L+FNQV+IFVK
Sbjct: 242 RPVCKKFMQNPLEIYVDDEAKLTLHGLQQYYIKLDEKEKNRKLSDLLDSLEFNQVIIFVK 301
Query: 297 SVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIER 356
S RA ELNKLL CNFPSI +HSG+ QEER+ RY+ FKE NKRI V+TD+ GRGIDIER
Sbjct: 302 STRRANELNKLLCACNFPSIAVHSGLPQEERIERYRSFKEFNKRICVSTDVFGRGIDIER 361
Query: 357 VNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKFMFLLIGSF 415
+N+ INYD+P+ AD YLHRVGRAGRFGTKGLA++FVSS D ++L ++ + I F
Sbjct: 362 INLAINYDLPNEADQYLHRVGRAGRFGTKGLAVSFVSSKEDEEVLEKIQSRFDVKITEF 420
>gi|403414604|emb|CCM01304.1| predicted protein [Fibroporia radiculosa]
Length = 440
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 285/413 (69%), Positives = 325/413 (78%), Gaps = 20/413 (4%)
Query: 6 DNEYEDELLDYEEED------AQAPDSV---------ATKANGEAAKKGYVGIHSSGFRD 50
DNE EL+DYE+E A AP + A GE KK + GIHS+GFRD
Sbjct: 5 DNE---ELIDYEDEHDVVTNGAAAPSATNGAVSATAPAVDGEGEKDKKNFSGIHSTGFRD 61
Query: 51 FLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEP 110
FLLKPELLRAI D GFEHPSEVQ ECIPQA+LGMDV+CQAKSG GKTAVFVL+TLQQ EP
Sbjct: 62 FLLKPELLRAISDLGFEHPSEVQQECIPQAVLGMDVLCQAKSGHGKTAVFVLATLQQLEP 121
Query: 111 NPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL--KNECPQ 168
G+V+ LVLCHTRELA+QI +E+ RF+ Y+PD++V+ FYGG + +LL K +CP
Sbjct: 122 VNGEVSVLVLCHTRELAFQIKNEYTRFAKYMPDVRVSTFYGGTPVAKDAELLRDKTKCPH 181
Query: 169 IVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMF 228
IVV TPGR+ AL RDK L V+HFILDECDKMLE LDMRRDVQEIF+ TPH KQVMMF
Sbjct: 182 IVVATPGRLNALTRDKVLDASKVKHFILDECDKMLEQLDMRRDVQEIFRATPHHKQVMMF 241
Query: 229 SATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDF 288
SATL+KEIR CKKFM +P+EI+VDDE KLTLHGL QHY KL E+ KNRKLN+LLD L+F
Sbjct: 242 SATLAKEIRVTCKKFMANPLEIFVDDETKLTLHGLRQHYAKLEEVAKNRKLNELLDTLEF 301
Query: 289 NQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLV 348
NQVVIFVKSV+RA EL+KLLV CNFPSI IHSG+SQEER+ RY FK KRILVATD+
Sbjct: 302 NQVVIFVKSVARAIELDKLLVSCNFPSISIHSGLSQEERINRYTAFKAFEKRILVATDIF 361
Query: 349 GRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDIL 401
GRGID+ERVNIVINYD P AD+YLHRVGRAGRFGTKGLAITFVSS SD ++
Sbjct: 362 GRGIDVERVNIVINYDCPPDADSYLHRVGRAGRFGTKGLAITFVSSESDQQVM 414
>gi|405118096|gb|AFR92871.1| ATP-dependent RNA helicase sub2 [Cryptococcus neoformans var.
grubii H99]
Length = 430
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 278/404 (68%), Positives = 329/404 (81%), Gaps = 7/404 (1%)
Query: 10 EDELLDYEEEDAQA-PDSVATKANGEAA---KKG-YVGIHSSGFRDFLLKPELLRAIVDS 64
E+EL+DY+E + P + A + NG+ A KKG YVGIHS+GFRDFLLKPELLRAI D
Sbjct: 6 EEELVDYDEAAEEILPPAPAAETNGDKADGDKKGSYVGIHSTGFRDFLLKPELLRAISDL 65
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFEHPSEVQ ECIPQAILG DV+CQAKSGMGKTAVFVL+ LQQ EP G+V+ ++LCHTR
Sbjct: 66 GFEHPSEVQQECIPQAILGTDVLCQAKSGMGKTAVFVLAALQQIEPVDGEVSIIILCHTR 125
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALAR 182
ELAYQI +EF RFS ++ +++ VFYGG I +++L N+ CP IVVGTPGR +AL R
Sbjct: 126 ELAYQIKNEFTRFSKFMTNVRTGVFYGGTPISADQEILANKEKCPHIVVGTPGRTMALVR 185
Query: 183 DKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKK 242
DK L+ V+HF+LDECDKMLE LDMRRDVQEIF+ TPH KQVMMFSATLSK+IR CKK
Sbjct: 186 DKKLNASKVKHFVLDECDKMLEQLDMRRDVQEIFRATPHHKQVMMFSATLSKDIRATCKK 245
Query: 243 FMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAA 302
FMQ P+EIYVDDE KLTLHGL Q Y+KL E EKNRKLNDLLD L+FNQV IFVKSV RA
Sbjct: 246 FMQSPLEIYVDDETKLTLHGLQQFYLKLEEREKNRKLNDLLDNLEFNQVCIFVKSVQRAT 305
Query: 303 ELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVIN 362
+L+ LL ECNFPSICIHSG+ Q ER++R++ FK KRILVATD+ GRGID+ERVN+VIN
Sbjct: 306 QLDALLQECNFPSICIHSGLQQAERISRFQQFKAFEKRILVATDIFGRGIDVERVNVVIN 365
Query: 363 YDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
YD P AD+YLHRVGRAGRFGTKGLAI+FVSS +D ++L ++ +
Sbjct: 366 YDAPSDADSYLHRVGRAGRFGTKGLAISFVSSDADQEVLQKIQE 409
>gi|339259990|ref|XP_003368629.1| spliceosome RNA helicase BAT1 [Trichinella spiralis]
gi|316964502|gb|EFV49578.1| spliceosome RNA helicase BAT1 [Trichinella spiralis]
Length = 640
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 282/427 (66%), Positives = 333/427 (77%), Gaps = 22/427 (5%)
Query: 11 DELLDYEEE-----------DAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLR 59
+ELLDYE+E D Q + + K Y IHSSGFRDFLLKPELLR
Sbjct: 7 EELLDYEDEQEETVQHSKIADIQTDHHLEVVGGKKPVKGAYASIHSSGFRDFLLKPELLR 66
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
+IVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFV++TLQQ G+V LV
Sbjct: 67 SIVDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVIATLQQLNAVEGEVHCLV 126
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA 179
+CHTRELA+QI E+ERF Y+P +KVAVF+GG N+K +D+L+N P IVVGTPGR+LA
Sbjct: 127 MCHTRELAFQISKEYERFCKYMPKVKVAVFFGGTNVKKDEDMLRNNTPHIVVGTPGRLLA 186
Query: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
LAR++ LSLK++++FILDECD+ML LDMRRDVQEI+KMTP +KQVMMFSATLSKE+RPV
Sbjct: 187 LARNRVLSLKSIKYFILDECDRMLGDLDMRRDVQEIYKMTPREKQVMMFSATLSKELRPV 246
Query: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 299
CKKFMQDPME+YVDDEAKLTLHGL Q+Y+KL E EKN+KL +LLD L+FNQVVIFV+SV
Sbjct: 247 CKKFMQDPMEVYVDDEAKLTLHGLQQYYVKLKETEKNKKLFELLDVLEFNQVVIFVRSVQ 306
Query: 300 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNI 359
R LN+LL E NFPSI IH M+QEERL+RY+ F++ +KRILVAT+L GRG+DIERVNI
Sbjct: 307 RCMALNELLTEQNFPSIAIHRSMAQEERLSRYQQFRDFHKRILVATNLFGRGMDIERVNI 366
Query: 360 VINYDMPDSADTYLHR-----------VGRAGRFGTKGLAITFVSSASDSDILNQVSKFM 408
V NYDMP+ +DTYLHR V RAGRFGTKGLAITFVS SD+ +LN V
Sbjct: 367 VFNYDMPEDSDTYLHRVNMNAFTLKIDVARAGRFGTKGLAITFVSDESDAKVLNDVQDRF 426
Query: 409 FLLIGSF 415
+ IG
Sbjct: 427 DVSIGEL 433
>gi|58259251|ref|XP_567038.1| ATP dependent RNA helicase [Cryptococcus neoformans var. neoformans
JEC21]
gi|57223175|gb|AAW41219.1| ATP dependent RNA helicase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 430
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 278/404 (68%), Positives = 329/404 (81%), Gaps = 7/404 (1%)
Query: 10 EDELLDYEEEDAQA-PDSVATKANGEAA---KKG-YVGIHSSGFRDFLLKPELLRAIVDS 64
E+EL+DY+E + P + A + NG+ A KKG YVGIHS+GFRDFLLKPELLRAI D
Sbjct: 6 EEELVDYDEAAEEILPPAPAAETNGDKADGDKKGSYVGIHSTGFRDFLLKPELLRAISDL 65
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFEHPSEVQ ECIPQAILG DV+CQAKSGMGKTAVFVL+ LQQ EP G+V+ ++LCHTR
Sbjct: 66 GFEHPSEVQQECIPQAILGTDVLCQAKSGMGKTAVFVLAALQQIEPVDGEVSIIILCHTR 125
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALAR 182
ELAYQI +EF RFS ++ +++ VFYGG I +++L N+ CP IVVGTPGR +AL R
Sbjct: 126 ELAYQIKNEFTRFSKFMTNVRTGVFYGGTPISADQEILANKEKCPHIVVGTPGRTMALVR 185
Query: 183 DKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKK 242
DK L+ V+HF+LDECDKMLE LDMRRDVQEIF+ TPH KQVMMFSATLSK+IR CKK
Sbjct: 186 DKKLNASKVKHFVLDECDKMLEQLDMRRDVQEIFRATPHHKQVMMFSATLSKDIRATCKK 245
Query: 243 FMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAA 302
FMQ P+EIYVDDE KLTLHGL Q Y+KL E EKNRKLNDLLD L+FNQV IFVKSV RA
Sbjct: 246 FMQSPLEIYVDDETKLTLHGLQQFYLKLEEREKNRKLNDLLDNLEFNQVCIFVKSVQRAT 305
Query: 303 ELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVIN 362
+L+ LL ECNFPSICIHSG+ Q ER++R++ FK KRILVATD+ GRGID+ERVN+VIN
Sbjct: 306 QLDALLQECNFPSICIHSGLQQAERISRFQQFKAFEKRILVATDIFGRGIDVERVNVVIN 365
Query: 363 YDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
YD P AD+YLHRVGRAGRFGTKGLAI+FVSS +D ++L ++ +
Sbjct: 366 YDAPSDADSYLHRVGRAGRFGTKGLAISFVSSDADQEVLQRIQE 409
>gi|448529866|ref|XP_003869942.1| Sub2 TREX complex component [Candida orthopsilosis Co 90-125]
gi|380354296|emb|CCG23810.1| Sub2 TREX complex component [Candida orthopsilosis]
Length = 434
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 278/419 (66%), Positives = 337/419 (80%), Gaps = 10/419 (2%)
Query: 7 NEYEDELLDYEE-EDAQAPDSVATKANGEAA------KKG-YVGIHSSGFRDFLLKPELL 58
+E ++ELLDY + E+ P + T + EA KKG YVGIH++GFRDFLLKPELL
Sbjct: 3 HEGQEELLDYSDSEEIAVPTTTQTGGDSEATNDKEADKKGSYVGIHATGFRDFLLKPELL 62
Query: 59 RAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTAL 118
RAI D GFEHPSEVQ CIPQ+ILG DV+CQAKSG+GKTAVFVLSTLQQ +P PG+++ L
Sbjct: 63 RAIGDCGFEHPSEVQQVCIPQSILGTDVLCQAKSGLGKTAVFVLSTLQQLDPVPGEISTL 122
Query: 119 VLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGR 176
V+CHTRELAYQI +E+ RFS Y+PD+K VFYGG IK + LKN+ CP IVV TPGR
Sbjct: 123 VICHTRELAYQIKNEYARFSKYMPDVKTEVFYGGTPIKRDIEKLKNKDTCPHIVVATPGR 182
Query: 177 ILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEI 236
+ AL +DK + L NV+ F++DECDK+LE++DMRRDVQ+IF+ TPH KQVMMFSATLS++I
Sbjct: 183 LHALVQDKAIRLNNVKSFVIDECDKVLEAIDMRRDVQDIFRATPHQKQVMMFSATLSQDI 242
Query: 237 RPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVK 296
RPVCKKFMQ+P+EIYVDDEAKLTLHGL Q+YIKL E EKNRKL+DLLD+L+FNQV+IFVK
Sbjct: 243 RPVCKKFMQNPLEIYVDDEAKLTLHGLQQYYIKLEEKEKNRKLSDLLDSLEFNQVIIFVK 302
Query: 297 SVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIER 356
S RA ELNKLL CNFPSI +HSG+ QEER+ RY+ FKE NKRI V+TD+ GRGIDIER
Sbjct: 303 STQRANELNKLLCACNFPSIAVHSGIPQEERIERYRSFKEFNKRICVSTDVFGRGIDIER 362
Query: 357 VNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKFMFLLIGSF 415
+N+ INYD+P+ AD YLHRVGRAGRFGTKGL I+FVSS D ++L ++ + I F
Sbjct: 363 INLAINYDLPNEADQYLHRVGRAGRFGTKGLGISFVSSKEDEEVLEKIQSRFDVKITEF 421
>gi|427789657|gb|JAA60280.1| Putative spliceosome rna helicase ddx39b [Rhipicephalus pulchellus]
Length = 421
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 279/395 (70%), Positives = 330/395 (83%)
Query: 10 EDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHP 69
+++LLDYE+E+ Q T + GYV IHSSGFRDFLLKPELLRAIVD GFEHP
Sbjct: 3 DNDLLDYEDEEDQEQTVGETIPEVKKPTGGYVSIHSSGFRDFLLKPELLRAIVDCGFEHP 62
Query: 70 SEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQ 129
SEVQHECIPQAILGMD++CQAKSGMGKTAVFVL+TLQQ +P GQV+ LV+CHTRELA+Q
Sbjct: 63 SEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQLDPVEGQVSVLVMCHTRELAFQ 122
Query: 130 ICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLK 189
I E+ERFS YLP ++V VF+GG+NI + +LK+ CP +VVGTPGR+LAL R + L LK
Sbjct: 123 ISKEYERFSKYLPSVRVGVFFGGMNITNDEKVLKSSCPHVVVGTPGRVLALVRSRKLQLK 182
Query: 190 NVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPME 249
+++HF+LDECDKMLE LDMRRDVQEIF+ TPH+KQVMMFSATLSK+IRPVC KFMQDPME
Sbjct: 183 HIKHFVLDECDKMLEQLDMRRDVQEIFRTTPHEKQVMMFSATLSKDIRPVCLKFMQDPME 242
Query: 250 IYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLV 309
+YVDDEAKLTLHGL Q+Y+KL + EKNRKL +LLD L+FNQVVIFVK+V R L +LLV
Sbjct: 243 VYVDDEAKLTLHGLQQYYVKLKDNEKNRKLFELLDLLEFNQVVIFVKTVQRCMALAQLLV 302
Query: 310 ECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSA 369
E NFP+I IH M+QEERL+RY+ FK+ KRILVAT+L GRG+DIERVNIV NYDMP+ +
Sbjct: 303 EQNFPAIAIHRAMTQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDS 362
Query: 370 DTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
DTYLHRV RAGRFGTKGLA+TFVS D+ LN+V
Sbjct: 363 DTYLHRVARAGRFGTKGLAVTFVSDEQDAKTLNEV 397
>gi|354547682|emb|CCE44417.1| hypothetical protein CPAR2_402180 [Candida parapsilosis]
Length = 434
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 278/419 (66%), Positives = 336/419 (80%), Gaps = 10/419 (2%)
Query: 7 NEYEDELLDYEE-EDAQAPDSVATKANGEAA------KKG-YVGIHSSGFRDFLLKPELL 58
+E ++ELLDY + E+ P + GEA KKG YVGIH++GFRDFLLKPELL
Sbjct: 3 HEGQEELLDYSDSEEIAVPTTTQAGGEGEATNDKEADKKGSYVGIHATGFRDFLLKPELL 62
Query: 59 RAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTAL 118
RAI D GFEHPSEVQ CIPQ+ILG DV+CQAKSG+GKTAVFVLSTLQQ +P PG+++ L
Sbjct: 63 RAIGDCGFEHPSEVQQVCIPQSILGTDVLCQAKSGLGKTAVFVLSTLQQLDPVPGEISTL 122
Query: 119 VLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGR 176
V+CHTRELAYQI +E+ RFS Y+PD+K VFYGG IK + LKN+ CP IVV TPGR
Sbjct: 123 VICHTRELAYQIKNEYARFSKYMPDVKTEVFYGGTPIKRDIEKLKNKDTCPHIVVATPGR 182
Query: 177 ILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEI 236
+ AL +DK + L NV+ F++DECDK+LE++DMRRDVQ+IF+ TPH KQVMMFSATLS++I
Sbjct: 183 LHALVQDKAIRLNNVKSFVIDECDKVLEAIDMRRDVQDIFRATPHQKQVMMFSATLSQDI 242
Query: 237 RPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVK 296
RPVCKKFMQ+P+EIYVDDEAKLTLHGL Q+YIKL E EKNRKL+DLLD+L+FNQV+IFVK
Sbjct: 243 RPVCKKFMQNPLEIYVDDEAKLTLHGLQQYYIKLEEKEKNRKLSDLLDSLEFNQVIIFVK 302
Query: 297 SVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIER 356
S RA ELNKLL CNFPSI +HSG+ QEER+ RY+ FKE NKRI V+TD+ GRGIDIER
Sbjct: 303 STQRANELNKLLCACNFPSIAVHSGIPQEERIERYRSFKEFNKRICVSTDVFGRGIDIER 362
Query: 357 VNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKFMFLLIGSF 415
+N+ INYD+P+ AD YLHRVGRAGRFGTKGL I+FVSS D ++L ++ + I F
Sbjct: 363 INLAINYDLPNEADQYLHRVGRAGRFGTKGLGISFVSSKEDEEVLEKIQSRFDVKITEF 421
>gi|156390799|ref|XP_001635457.1| predicted protein [Nematostella vectensis]
gi|156222551|gb|EDO43394.1| predicted protein [Nematostella vectensis]
Length = 429
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 293/403 (72%), Positives = 336/403 (83%), Gaps = 3/403 (0%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAAK--KG-YVGIHSSGFRDFLLKPELLRAIV 62
D + E+ELLDYEEE+ +AP A +A K KG YV IHSSGFRDFLLKPELLRAIV
Sbjct: 4 DGDVENELLDYEEEENEAPAEGAQAIKDQAKKDVKGTYVSIHSSGFRDFLLKPELLRAIV 63
Query: 63 DSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCH 122
D GFEHPSEVQHECIPQAILGMD+ICQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CH
Sbjct: 64 DCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLATLQQLEPVDGQVSVLVMCH 123
Query: 123 TRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALAR 182
TRELA+QI E+ERF Y+ +IK+AVF+GG+NIK + LK CP IVVGTPGRILAL R
Sbjct: 124 TRELAFQIHKEYERFCKYMSNIKIAVFFGGINIKKDQQTLKTNCPHIVVGTPGRILALTR 183
Query: 183 DKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKK 242
+K L+LK+ +HFILDECDKMLE LDMRRDVQE+F+MTPH+KQVMMFSATL KEIR VCKK
Sbjct: 184 EKTLNLKHAKHFILDECDKMLEQLDMRRDVQEVFRMTPHEKQVMMFSATLPKEIRSVCKK 243
Query: 243 FMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAA 302
FMQDPME+YVDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQV+IFVKSV R
Sbjct: 244 FMQDPMEVYVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDLLEFNQVIIFVKSVQRCT 303
Query: 303 ELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVIN 362
L+ LL++ NFP+ICIH GM QEERL RY+ FK KR+LVAT+L GRG+DIERVNIV N
Sbjct: 304 ALSHLLLKQNFPAICIHRGMKQEERLARYQQFKNFEKRMLVATNLFGRGMDIERVNIVFN 363
Query: 363 YDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVS 405
YDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ LN+V
Sbjct: 364 YDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQ 406
>gi|383858684|ref|XP_003704829.1| PREDICTED: ATP-dependent RNA helicase WM6-like [Megachile
rotundata]
Length = 454
Score = 577 bits (1487), Expect = e-162, Method: Compositional matrix adjust.
Identities = 288/398 (72%), Positives = 331/398 (83%), Gaps = 2/398 (0%)
Query: 11 DELLDYEEEDA--QAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEH 68
D+LLDYE+E+ Q D A + K YV IHSSGFRDFLLKPE+LRAIVD GFEH
Sbjct: 5 DDLLDYEDEEQTEQVVDGSGDIAAKKEVKGTYVSIHSSGFRDFLLKPEILRAIVDCGFEH 64
Query: 69 PSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAY 128
PSEVQHECIPQA+LGMD++CQAKSGMGKTAVFVL+TLQQ E QV LV+CHTRELA+
Sbjct: 65 PSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLELTENQVYVLVMCHTRELAF 124
Query: 129 QICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSL 188
QI E+ERFS Y+P +KV VF+GG+ I+ +++LKN CP IVVGTPGRILAL R+K L+L
Sbjct: 125 QISKEYERFSKYMPHVKVGVFFGGLPIQKDEEVLKNTCPHIVVGTPGRILALVRNKKLNL 184
Query: 189 KNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPM 248
K+++HFILDECDKMLE LDMRRDVQEIF+ TPH KQVMMFSATLSKEIRPVCKKFMQDPM
Sbjct: 185 KHLKHFILDECDKMLELLDMRRDVQEIFRSTPHGKQVMMFSATLSKEIRPVCKKFMQDPM 244
Query: 249 EIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLL 308
E+YVDDEAKLTLHGL QHY+KL E EKN+KL +LLD L+FNQVVIFVKSV R L +LL
Sbjct: 245 EVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCMALAQLL 304
Query: 309 VECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDS 368
E NFP+I IH GM+QEERL+RY+ FK+ KRILVAT+L GRG+DIERVNIV NYDMP+
Sbjct: 305 TEQNFPAIGIHRGMTQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPED 364
Query: 369 ADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
+DTYLHRV RAGRFGTKGLAIT VS SD+ ILN V +
Sbjct: 365 SDTYLHRVARAGRFGTKGLAITLVSDESDAKILNDVQE 402
>gi|336387322|gb|EGO28467.1| hypothetical protein SERLADRAFT_458898 [Serpula lacrymans var.
lacrymans S7.9]
Length = 437
Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust.
Identities = 285/419 (68%), Positives = 334/419 (79%), Gaps = 18/419 (4%)
Query: 4 TRDNEYEDELLDYEEED------AQAPDS----VATKANGEA--AKKGYVGIHSSGFRDF 51
+ DNE +L+DYE+E+ A P S +AT +GE KK + GIHS+GFRDF
Sbjct: 3 SHDNE---DLIDYEDENDLPTNGAAVPSSNGAALATAVDGEGDKEKKNFSGIHSTGFRDF 59
Query: 52 LLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPN 111
LLKPELLRAI D GFEHPSEVQ ECIPQA+LGMDV+CQAKSG GKTAVFVL+TLQQ EP
Sbjct: 60 LLKPELLRAISDLGFEHPSEVQQECIPQAVLGMDVLCQAKSGHGKTAVFVLATLQQLEPV 119
Query: 112 PGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL--KNECPQI 169
G+V+ LVLCHTRELA+QI +E+ RF+ Y+PD++V+ FYGG + ++L K +CP I
Sbjct: 120 NGEVSVLVLCHTRELAFQIKNEYTRFAKYMPDVRVSTFYGGTPVAKDSEILRDKTKCPHI 179
Query: 170 VVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFS 229
VV TPGR+ ALARDK L KNV+HF+LDECDKMLE LDMRRDVQEIF+ TPH KQVMMFS
Sbjct: 180 VVATPGRLNALARDKVLDAKNVKHFVLDECDKMLEQLDMRRDVQEIFRATPHHKQVMMFS 239
Query: 230 ATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFN 289
ATL+KEIR CKKFM +P+EI+VDDE KLTLHGL QHY+KL E KNRKLN+LLD L+FN
Sbjct: 240 ATLAKEIRVTCKKFMANPLEIFVDDETKLTLHGLQQHYVKLEETGKNRKLNELLDTLEFN 299
Query: 290 QVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVG 349
QVVIFVKSV+RA EL+KLLV CNFPSI IHSG+ QEER+ RY FK KRILVATD+ G
Sbjct: 300 QVVIFVKSVARAIELDKLLVSCNFPSISIHSGLQQEERIKRYTAFKAFEKRILVATDIFG 359
Query: 350 RGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV-SKF 407
RGID+ERVNIV+NYD P AD+YLHRVGRAGRFGTKGLAIT VSS SD ++ + S+F
Sbjct: 360 RGIDVERVNIVVNYDCPPDADSYLHRVGRAGRFGTKGLAITCVSSESDQQVMAAIQSRF 418
>gi|321250096|ref|XP_003191688.1| ATP dependent RNA helicase [Cryptococcus gattii WM276]
gi|317458155|gb|ADV19901.1| ATP dependent RNA helicase, putative [Cryptococcus gattii WM276]
Length = 442
Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust.
Identities = 277/404 (68%), Positives = 329/404 (81%), Gaps = 7/404 (1%)
Query: 10 EDELLDYEEEDAQA-PDSVATKANGEAA---KKG-YVGIHSSGFRDFLLKPELLRAIVDS 64
E+EL+DY+E + P + A + NG+ A KKG YVGIHS+GFRDFLLKPELLRAI D
Sbjct: 18 EEELVDYDEAAEEILPPAPAAETNGDKADGDKKGSYVGIHSTGFRDFLLKPELLRAISDL 77
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFEHPSEVQ ECIPQAILG DV+CQAKSGMGKTAVFVL+ LQQ EP G+V+ ++LCHTR
Sbjct: 78 GFEHPSEVQQECIPQAILGTDVLCQAKSGMGKTAVFVLAALQQIEPVDGEVSIIILCHTR 137
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALAR 182
ELAYQI +EF RFS ++ +++ VFYGG I +++L N+ CP IVVGTPGR +AL R
Sbjct: 138 ELAYQIKNEFTRFSKFMTNVRTGVFYGGTPISADQEILANKEKCPHIVVGTPGRTMALVR 197
Query: 183 DKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKK 242
DK L+ V+HF+LDECDKMLE LDMRRDVQEIF+ TPH KQVMMFSATLSK+IR CKK
Sbjct: 198 DKKLNASKVKHFVLDECDKMLEQLDMRRDVQEIFRATPHHKQVMMFSATLSKDIRATCKK 257
Query: 243 FMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAA 302
FMQ P+EIYVDDE KLTLHGL Q Y+KL E EKNRKLNDLLD L+FNQV IFVKSV RA
Sbjct: 258 FMQSPLEIYVDDETKLTLHGLQQFYLKLEEREKNRKLNDLLDNLEFNQVCIFVKSVQRAT 317
Query: 303 ELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVIN 362
+L+ LL ECNFPSICIHSG+ Q ER++R++ FK KRILVATD+ GRGID+ERVN+VIN
Sbjct: 318 QLDALLQECNFPSICIHSGLQQAERISRFQQFKAFEKRILVATDIFGRGIDVERVNVVIN 377
Query: 363 YDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
YD P AD+YLHRVGRAGRFGTKGLAI+FVS+ +D ++L ++ +
Sbjct: 378 YDAPADADSYLHRVGRAGRFGTKGLAISFVSNDADQEVLQKIQE 421
>gi|268530282|ref|XP_002630267.1| C. briggsae CBR-HEL-1 protein [Caenorhabditis briggsae]
Length = 424
Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust.
Identities = 277/397 (69%), Positives = 321/397 (80%), Gaps = 1/397 (0%)
Query: 10 EDELLDYEEEDAQAPDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEH 68
+++LLDYEEE + D KG Y IHSSGFRDFLLKPE+LRAI D GFEH
Sbjct: 3 DEQLLDYEEEQEEIQDKQEVGGGDSKKTKGTYASIHSSGFRDFLLKPEILRAIGDCGFEH 62
Query: 69 PSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAY 128
PSEVQHECIPQAILGMDV+CQAKSGMGKTAVFV++TLQQ EP G+V+ + +CHTRELA+
Sbjct: 63 PSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAF 122
Query: 129 QICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSL 188
QI E+ERFS YLP +KVAVF+GG+ IK ++ L N+CP IVVGTPGR+LALAR L L
Sbjct: 123 QISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIVVGTPGRMLALARSGKLKL 182
Query: 189 KNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPM 248
V++FILDECDKM+ DMRRDVQEI KMTP KQVMMFSATL KE+R VCK+FMQDPM
Sbjct: 183 DKVKYFILDECDKMIGDADMRRDVQEIVKMTPQQKQVMMFSATLPKELRAVCKRFMQDPM 242
Query: 249 EIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLL 308
E+YVDDEAKLTLHGL QHY+KL E EKNRKL +LLD L+FNQVVIFVK+V R L++LL
Sbjct: 243 EVYVDDEAKLTLHGLQQHYVKLKEAEKNRKLLNLLDILEFNQVVIFVKAVKRCEALHQLL 302
Query: 309 VECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDS 368
E NFPSI IH M+QEERL+RY+ FK+ KRILVATDL GRG+DIERVNIV NYDMP+
Sbjct: 303 TEQNFPSIAIHRQMAQEERLSRYQAFKDFQKRILVATDLFGRGMDIERVNIVFNYDMPED 362
Query: 369 ADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVS 405
+D+YLHRV RAGRFGTKGLAITFVS +D+ +LN V
Sbjct: 363 SDSYLHRVARAGRFGTKGLAITFVSDENDAKVLNSVQ 399
>gi|241953960|ref|XP_002419701.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
gi|223643042|emb|CAX41916.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
Length = 433
Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust.
Identities = 279/419 (66%), Positives = 338/419 (80%), Gaps = 11/419 (2%)
Query: 7 NEYEDELLDYEEEDAQAPDSVATKANGEAA-------KKG-YVGIHSSGFRDFLLKPELL 58
+E ++ELLDY + + A S T+A+GE KKG YVGIH++GFRDFLLKPELL
Sbjct: 3 HEGQEELLDYSDSEEIAV-STTTQASGEGQSNDKESDKKGSYVGIHATGFRDFLLKPELL 61
Query: 59 RAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTAL 118
RAI D GFEHPSEVQ CIPQ+ILG DV+CQAKSG+GKTAVFVLSTLQQ +P PG+++ L
Sbjct: 62 RAIGDCGFEHPSEVQQVCIPQSILGTDVLCQAKSGLGKTAVFVLSTLQQLDPVPGEISTL 121
Query: 119 VLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGR 176
V+CHTRELAYQI +E+ RFS Y+PD+K VFYGG IK + LKN+ CP IVV TPGR
Sbjct: 122 VICHTRELAYQIRNEYARFSKYMPDVKTDVFYGGTPIKRDIEKLKNKDTCPHIVVATPGR 181
Query: 177 ILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEI 236
+ AL +K + L NV+ F++DECDK+LES+DMRRDVQ+IF+ TPH KQVMMFSATLS++I
Sbjct: 182 LHALVEEKAIRLNNVKSFVIDECDKVLESIDMRRDVQDIFRATPHQKQVMMFSATLSQDI 241
Query: 237 RPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVK 296
RPVCKKFMQ+P+EIYVDDEAKLTLHGL Q+YIKL E EKNRKL+DLLD+L+FNQV+IFVK
Sbjct: 242 RPVCKKFMQNPLEIYVDDEAKLTLHGLQQYYIKLDEKEKNRKLSDLLDSLEFNQVIIFVK 301
Query: 297 SVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIER 356
S RA ELNKLL CNFPSI +HSG+ QEER+ RY+ FKE NKRI V+TD+ GRGIDIER
Sbjct: 302 STRRANELNKLLCACNFPSIAVHSGLPQEERIERYRSFKEFNKRICVSTDVFGRGIDIER 361
Query: 357 VNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKFMFLLIGSF 415
+N+ INYD+P+ AD YLHRVGRAGRFGTKGLA++FVSS D ++L ++ + I F
Sbjct: 362 INLAINYDLPNEADQYLHRVGRAGRFGTKGLAVSFVSSKEDEEVLEKIQSRFDVKITEF 420
>gi|390603969|gb|EIN13360.1| ATP-dependent RNA helicase SUB2 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 434
Score = 576 bits (1485), Expect = e-162, Method: Compositional matrix adjust.
Identities = 283/414 (68%), Positives = 329/414 (79%), Gaps = 15/414 (3%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAA---------KKGYVGIHSSGFRDFLLKPE 56
DNE EL+DYE+E +VA+ A KK + GIHS+GFRDFLLKPE
Sbjct: 5 DNE---ELIDYEDEADVGTGAVASNGVAVAGATADGDDKDKKNFSGIHSTGFRDFLLKPE 61
Query: 57 LLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVT 116
LLRAI D GFEHPSEVQ ECIPQA+LGMDV+CQAKSG GKTAVFVL+TLQQ EP GQV+
Sbjct: 62 LLRAISDLGFEHPSEVQQECIPQAVLGMDVLCQAKSGHGKTAVFVLATLQQLEPVNGQVS 121
Query: 117 ALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTP 174
LVLCHTRELA+QI +E+ RF+ Y+PD++VA F+GGV + + L+++ CP IVV TP
Sbjct: 122 VLVLCHTRELAFQIKNEYARFAKYMPDVRVATFFGGVPVTKDAETLRDKAKCPHIVVATP 181
Query: 175 GRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSK 234
GR+ AL RDK L KNV+HF+LDECDKMLE LDMRRDVQEIF+ TPH KQVMMFSATLSK
Sbjct: 182 GRLNALVRDKTLDAKNVKHFVLDECDKMLEQLDMRRDVQEIFRATPHHKQVMMFSATLSK 241
Query: 235 EIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIF 294
EIR CKKFM +P+EI+VDDE KLTLHGL QHY+KL E +KNRKLN+LLD L+FNQVVIF
Sbjct: 242 EIRVTCKKFMANPLEIFVDDETKLTLHGLQQHYVKLEENQKNRKLNELLDTLEFNQVVIF 301
Query: 295 VKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDI 354
VKSV+R EL+KLLV CNFPSI IHSG+ Q ER+ RY FK KRILVATD+ GRGID+
Sbjct: 302 VKSVARCIELDKLLVSCNFPSISIHSGLDQVERINRYTAFKAFEKRILVATDIFGRGIDV 361
Query: 355 ERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV-SKF 407
ERVNIVINYD P AD+YLHRVGRAGRFGTKGLAITFVSS SD+ ++ + S+F
Sbjct: 362 ERVNIVINYDSPADADSYLHRVGRAGRFGTKGLAITFVSSESDTQVMAAIQSRF 415
>gi|332376787|gb|AEE63533.1| unknown [Dendroctonus ponderosae]
Length = 424
Score = 576 bits (1485), Expect = e-162, Method: Compositional matrix adjust.
Identities = 284/397 (71%), Positives = 331/397 (83%), Gaps = 2/397 (0%)
Query: 11 DELLDYEEEDA--QAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEH 68
++LLDYE+E+ Q T+ +A K YV IHSSGFRDFLLKPE+LRAIVD GFEH
Sbjct: 5 EDLLDYEDEEQTEQTVHEAETQETKKAVKGTYVSIHSSGFRDFLLKPEILRAIVDCGFEH 64
Query: 69 PSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAY 128
PSEVQHECIPQA+LGMD++CQAKSGMGKTAVFVL+TLQQ EP V LV+CHTRELA+
Sbjct: 65 PSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPTENVVYVLVMCHTRELAF 124
Query: 129 QICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSL 188
QI E+ERFS Y+P IKV VF+GG+ I+ +++LKN CP IVVGTPGRILAL + K L+L
Sbjct: 125 QISKEYERFSKYMPSIKVGVFFGGLPIQKDEEMLKNNCPHIVVGTPGRILALVKSKKLNL 184
Query: 189 KNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPM 248
K+++HFILDECDKMLE LDMRRDVQEI++ TPH KQVMMFSATLSK+IRP+CKKFMQDPM
Sbjct: 185 KHLKHFILDECDKMLELLDMRRDVQEIYRNTPHGKQVMMFSATLSKDIRPICKKFMQDPM 244
Query: 249 EIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLL 308
E+YVDDEAKLTLHGL QHY+KL E EKN+KL +LLD L+FNQVVIFVKSV R L +LL
Sbjct: 245 EVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCVALAQLL 304
Query: 309 VECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDS 368
E NFP+I IH GM Q+ERL+RY+ FK+ KRILVAT+L GRG+DIERVNIV NYDMP+
Sbjct: 305 TEQNFPAIGIHRGMDQKERLSRYEQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPED 364
Query: 369 ADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVS 405
+DTYLHRV RAGRFGTKGLAITFVS SD+ ILN+V
Sbjct: 365 SDTYLHRVARAGRFGTKGLAITFVSEESDAKILNEVQ 401
>gi|385305885|gb|EIF49828.1| atp-dependent rna helicase sub2 [Dekkera bruxellensis AWRI1499]
Length = 433
Score = 576 bits (1484), Expect = e-162, Method: Compositional matrix adjust.
Identities = 272/406 (66%), Positives = 333/406 (82%), Gaps = 9/406 (2%)
Query: 10 EDELLDYE--EEDAQAPDSVAT----KANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIV 62
E+ELLDY EE AP + T K GE KKG YVG+H++GFRDFLLKPELLRAI
Sbjct: 6 EEELLDYSDSEEINVAPTTTQTSDETKKEGETDKKGSYVGVHTTGFRDFLLKPELLRAIA 65
Query: 63 DSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCH 122
D GFEHPSEVQ CIPQAILG DV+CQAKSG+GKTAVFVLSTLQQ +P PG+++ +V+CH
Sbjct: 66 DCGFEHPSEVQQACIPQAILGNDVLCQAKSGLGKTAVFVLSTLQQLDPTPGEISTVVICH 125
Query: 123 TRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILAL 180
TRELAYQI +E+ RFS Y+PD++ AVFYGG++I ++LLKN+ CP IVVGTPGR+ AL
Sbjct: 126 TRELAYQIRNEYVRFSKYMPDVRTAVFYGGISINKDEELLKNKDTCPHIVVGTPGRLTAL 185
Query: 181 ARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
R+K + L NV++F++DECD++LE + MRRDVQ+IF+ TP+ KQVMMFSATL E+RPVC
Sbjct: 186 VREKAIRLNNVKNFVIDECDRVLEQISMRRDVQDIFRATPYQKQVMMFSATLPTEMRPVC 245
Query: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSR 300
KKFM++P+EIYVDDE KLTLHGL Q+YIKL E +KN KL +LLD+L+FNQV+IFVKS R
Sbjct: 246 KKFMKNPLEIYVDDEKKLTLHGLQQYYIKLPEEKKNVKLAELLDSLEFNQVIIFVKSTRR 305
Query: 301 AAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIV 360
A LNKLL + NFPSIC+HSGM QEER+ RYK FKE NKRI V+TD+ GRGIDIER+N+
Sbjct: 306 ADALNKLLCDSNFPSICVHSGMPQEERIARYKSFKEYNKRICVSTDVFGRGIDIERINVA 365
Query: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
INYDMP AD YLHRVGRAGRFGTKGL+++FVSS D ++L+Q+ +
Sbjct: 366 INYDMPKEADQYLHRVGRAGRFGTKGLSVSFVSSKDDEELLDQIQQ 411
>gi|149236910|ref|XP_001524332.1| ATP-dependent RNA helicase SUB2 [Lodderomyces elongisporus NRRL
YB-4239]
gi|152112304|sp|A5E3W5.1|SUB2_LODEL RecName: Full=ATP-dependent RNA helicase SUB2
gi|146451867|gb|EDK46123.1| ATP-dependent RNA helicase SUB2 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 433
Score = 576 bits (1484), Expect = e-162, Method: Compositional matrix adjust.
Identities = 276/417 (66%), Positives = 334/417 (80%), Gaps = 9/417 (2%)
Query: 8 EYEDELLDYEEEDAQAPDSVATKANGEAA------KKG-YVGIHSSGFRDFLLKPELLRA 60
E ++ELLDY + + A + GE+A KKG YVGIH++GFRDFLLKPELLRA
Sbjct: 4 ENQEELLDYSDSEEIAVPTTTQAGEGESANDKEADKKGSYVGIHATGFRDFLLKPELLRA 63
Query: 61 IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVL 120
I D GFEHPSEVQ CIPQ+ILG DV+CQAKSG+GKTAVFVLSTLQQ +P G+++ LV+
Sbjct: 64 IGDCGFEHPSEVQQVCIPQSILGTDVLCQAKSGLGKTAVFVLSTLQQLDPVAGEISTLVI 123
Query: 121 CHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRIL 178
CHTRELAYQI +E+ RFS Y+PD+K VFYGG +K + LKN+ CP IVV TPGR+
Sbjct: 124 CHTRELAYQIRNEYARFSKYMPDVKTEVFYGGTPVKRDIEKLKNKDTCPHIVVATPGRLH 183
Query: 179 ALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRP 238
AL ++K + L NV+ F++DECDK+LESLDMRRDVQ+IF+ TPH KQVMMFSATLS++IRP
Sbjct: 184 ALVQEKAIRLNNVKSFVIDECDKVLESLDMRRDVQDIFRATPHQKQVMMFSATLSQDIRP 243
Query: 239 VCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSV 298
VCKKFMQ+P+EIYVDDEAKLTLHGL Q+YIKL E EKNRKL+DLLD+L+FNQV+IFVKS
Sbjct: 244 VCKKFMQNPLEIYVDDEAKLTLHGLQQYYIKLEEKEKNRKLSDLLDSLEFNQVIIFVKST 303
Query: 299 SRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVN 358
RA ELNKLL CNFPSI +HSG+ QEER+ RYK FKE NKRI V+TD+ GRGIDIER+N
Sbjct: 304 QRANELNKLLCACNFPSIAVHSGLPQEERIERYKSFKEFNKRICVSTDVFGRGIDIERIN 363
Query: 359 IVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKFMFLLIGSF 415
+ INYD+P+ AD YLHRVGRAGRFGTKGL I+FVS+ D ++L ++ + I F
Sbjct: 364 LAINYDLPNEADQYLHRVGRAGRFGTKGLGISFVSTKEDEEVLEKIQSRFDVKITEF 420
>gi|344228996|gb|EGV60882.1| hypothetical protein CANTEDRAFT_128604 [Candida tenuis ATCC 10573]
Length = 431
Score = 576 bits (1484), Expect = e-162, Method: Compositional matrix adjust.
Identities = 278/408 (68%), Positives = 334/408 (81%), Gaps = 8/408 (1%)
Query: 8 EYEDELLDY---EEEDAQAPDSVATKAN-GEAAKKG-YVGIHSSGFRDFLLKPELLRAIV 62
E ++ELLDY EE P + AT N EA KKG YVGIH++GFRDFLLKPELLRAI
Sbjct: 4 EGQEELLDYSDSEEIAVTQPTTTATDGNEKEADKKGSYVGIHATGFRDFLLKPELLRAIG 63
Query: 63 DSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCH 122
D GFEHPSEVQ CIPQ+ILG DV+CQAKSG+GKTAVFVLSTLQQ +P PG+V+ LV+CH
Sbjct: 64 DCGFEHPSEVQQVCIPQSILGTDVLCQAKSGLGKTAVFVLSTLQQLDPVPGEVSTLVVCH 123
Query: 123 TRELAYQICHEFERFSTYLPDIKVAVFYGG--VNIKIHKDLLKNECPQIVVGTPGRILAL 180
TRELAYQI +E+ RFS Y+PD++ VFYGG +N + K K CP IVV TPGR+ AL
Sbjct: 124 TRELAYQIRNEYARFSKYMPDVRTEVFYGGTPINKDVAKLKDKETCPHIVVATPGRLHAL 183
Query: 181 ARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
DK L L N++ F++DECDK+L+S+DMRRDVQ+IF+ TPH KQVMMFSATLS+EIRP+C
Sbjct: 184 VNDKALRLNNIKSFVIDECDKVLDSVDMRRDVQDIFRATPHQKQVMMFSATLSQEIRPIC 243
Query: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSR 300
KKFMQ+P+EIYVDDEAKLTLHGL Q+Y+KL E EKNRKL+DLLD+L+FNQV+IFVKS R
Sbjct: 244 KKFMQNPLEIYVDDEAKLTLHGLQQYYLKLDEKEKNRKLSDLLDSLEFNQVIIFVKSTQR 303
Query: 301 AAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIV 360
A EL+KLL CNFPSI +HSG+ QEER+ RYK FKE NKRI V+TD+ GRGIDIER+N+
Sbjct: 304 ANELDKLLCACNFPSIAVHSGLKQEERIARYKSFKEFNKRICVSTDVFGRGIDIERINLA 363
Query: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV-SKF 407
INYD+P+ AD YLHRVGRAGRFGTKGLAI+FVS+ D ++L ++ S+F
Sbjct: 364 INYDLPNEADQYLHRVGRAGRFGTKGLAISFVSTPEDEEVLEKIQSRF 411
>gi|156550342|ref|XP_001606676.1| PREDICTED: ATP-dependent RNA helicase WM6-like [Nasonia
vitripennis]
Length = 425
Score = 576 bits (1484), Expect = e-162, Method: Compositional matrix adjust.
Identities = 289/402 (71%), Positives = 334/402 (83%), Gaps = 9/402 (2%)
Query: 11 DELLDYEEEDAQAPDSVATKANGEAA------KKGYVGIHSSGFRDFLLKPELLRAIVDS 64
D+LLDYE+E + + V T NGE A K YV IHSSGFRDFLLKPE+LRAI D
Sbjct: 5 DDLLDYEDE--EQTEQVVT-GNGEVAPAKKEVKGTYVSIHSSGFRDFLLKPEILRAISDC 61
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFEHPSEVQHECIPQA+LGMD++CQAKSGMGKTAVFVL+TLQQ E QV LV+CHTR
Sbjct: 62 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLELAENQVLVLVMCHTR 121
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDK 184
ELA+QI E+ERFS Y+P +KV+VF+GG+ I+ +++LKN CP IVVGTPGRILAL R K
Sbjct: 122 ELAFQISKEYERFSKYIPQVKVSVFFGGLPIQKDEEVLKNTCPHIVVGTPGRILALIRSK 181
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 244
L+LKN++HFILDECDKMLE LDMR+DVQEIF+ TPH+KQVMMFSATLSKEIRPVCKKFM
Sbjct: 182 KLNLKNLKHFILDECDKMLEQLDMRKDVQEIFRSTPHNKQVMMFSATLSKEIRPVCKKFM 241
Query: 245 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 304
QDPME+YVDDEAKLTLHGL QHY+KL E EKN+KL +LLD L+FNQVVIFVKSV R L
Sbjct: 242 QDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDILEFNQVVIFVKSVQRCMAL 301
Query: 305 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 364
+LL E NFP+I IH GM+QEERLT+Y+ FK+ KRILVAT+L GRG+DIERVNIV NYD
Sbjct: 302 AQLLTEQNFPAIGIHRGMTQEERLTKYQAFKDFQKRILVATNLFGRGMDIERVNIVFNYD 361
Query: 365 MPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
MP+ +DTYLHRV RAGRFGTKGLAIT VS +D+ ILN V +
Sbjct: 362 MPEDSDTYLHRVARAGRFGTKGLAITLVSDEADAKILNDVQE 403
>gi|341896383|gb|EGT52318.1| CBN-HEL-1 protein [Caenorhabditis brenneri]
Length = 424
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 276/396 (69%), Positives = 320/396 (80%), Gaps = 1/396 (0%)
Query: 10 EDELLDYEEEDAQAPDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEH 68
+++LLDYEEE D KG Y IHSSGFRDFLLKPE+LRAI D GFEH
Sbjct: 3 DEQLLDYEEEQEDIQDKQEVGGGDSKKTKGTYASIHSSGFRDFLLKPEILRAIGDCGFEH 62
Query: 69 PSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAY 128
PSEVQHECIPQAILGMDV+CQAKSGMGKTAVFV++TLQQ EP G+V+ + +CHTRELA+
Sbjct: 63 PSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAF 122
Query: 129 QICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSL 188
QI E+ERFS YLP +KVAVF+GG+ IK ++ L N+CP IVVGTPGR+LALAR L L
Sbjct: 123 QISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIVVGTPGRMLALARSGKLKL 182
Query: 189 KNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPM 248
V++F+LDECDKM+ DMRRDVQEI KMTP KQVMMFSATL KE+R VCK+FMQDPM
Sbjct: 183 DKVKYFVLDECDKMIGDADMRRDVQEIVKMTPQQKQVMMFSATLPKELRAVCKRFMQDPM 242
Query: 249 EIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLL 308
E+YVDDEAKLTLHGL QHY+KL E EKNR+L +LLDAL+FNQVVIFVK+V R L++LL
Sbjct: 243 EVYVDDEAKLTLHGLQQHYVKLKEAEKNRRLLNLLDALEFNQVVIFVKAVKRCEALHQLL 302
Query: 309 VECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDS 368
E NFPSI IH M+QEERL+RY+ FK+ KRILVATDL GRG+DIERVNIV NYDMP+
Sbjct: 303 TEQNFPSIAIHRQMAQEERLSRYQAFKDFQKRILVATDLFGRGMDIERVNIVFNYDMPED 362
Query: 369 ADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
+D+YLHRV RAGRFGTKGLAITFVS +D+ LN V
Sbjct: 363 SDSYLHRVARAGRFGTKGLAITFVSDENDAKTLNSV 398
>gi|344300348|gb|EGW30669.1| hypothetical protein SPAPADRAFT_62538 [Spathaspora passalidarum
NRRL Y-27907]
Length = 439
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 275/424 (64%), Positives = 337/424 (79%), Gaps = 15/424 (3%)
Query: 7 NEYEDELLDYEE-EDAQAPDSVATKANGEAAKKG------------YVGIHSSGFRDFLL 53
+E ++ELLDY + E+ P + AT A +A +G YVGIH++GFRDFLL
Sbjct: 3 HEGQEELLDYSDSEEIAVPTTSATTAGNDAGAEGAANDKEADKKGSYVGIHATGFRDFLL 62
Query: 54 KPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPG 113
KPELLRAI D GFEHPSEVQ CIPQ+ILG DV+CQAKSG+GKTAVFVLSTLQQ +P PG
Sbjct: 63 KPELLRAIGDCGFEHPSEVQQVCIPQSILGTDVLCQAKSGLGKTAVFVLSTLQQLDPIPG 122
Query: 114 QVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVV 171
+++ LV+CHTRELAYQI +E+ RFS Y+PD+K VFYGG IK + LKN+ CP IVV
Sbjct: 123 EISTLVICHTRELAYQIRNEYARFSKYMPDVKTEVFYGGTPIKRDIEKLKNKDTCPHIVV 182
Query: 172 GTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSAT 231
TPGR+ AL ++K + L NV+ F++DECDK+LE++DMRRDVQ+IF+ TPH KQVMMFSAT
Sbjct: 183 ATPGRLHALVQEKAIRLNNVKSFVIDECDKVLEAIDMRRDVQDIFRATPHQKQVMMFSAT 242
Query: 232 LSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQV 291
LS+EIRPVCKKFMQ+P+EIYVDDEAKLTLHGL Q+YIKL E EKNRKL+DLLD+L+FNQV
Sbjct: 243 LSQEIRPVCKKFMQNPLEIYVDDEAKLTLHGLQQYYIKLEEKEKNRKLSDLLDSLEFNQV 302
Query: 292 VIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRG 351
+IFV+S RA ELNKLL CNFPSI +HSG+ QEER+ RY+ FKE NKRI V+TD+ GRG
Sbjct: 303 IIFVRSTQRANELNKLLCACNFPSIAVHSGLPQEERIERYRSFKEFNKRICVSTDVFGRG 362
Query: 352 IDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKFMFLL 411
IDIER+N+ INYD+P+ AD YLHRVGRAGRFGTKGLAI+ VS+ D ++L ++ +
Sbjct: 363 IDIERINLAINYDLPNEADQYLHRVGRAGRFGTKGLAISLVSTKEDEEVLEKIQSRFDVK 422
Query: 412 IGSF 415
I F
Sbjct: 423 ITEF 426
>gi|170085389|ref|XP_001873918.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651470|gb|EDR15710.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 434
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 281/414 (67%), Positives = 330/414 (79%), Gaps = 15/414 (3%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAA---------KKGYVGIHSSGFRDFLLKPE 56
DNE +L+DYE+E P +A A A KK + GIHS+GFRDFLLKPE
Sbjct: 5 DNE---DLIDYEDEHEVIPGGIAASATNGAPSAVDGDDKDKKNFSGIHSTGFRDFLLKPE 61
Query: 57 LLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVT 116
LLRAI D GFEHPSEVQ ECIPQA+LGMDV+CQAKSG GKTAVFVL+TLQQ EP G+V+
Sbjct: 62 LLRAISDLGFEHPSEVQQECIPQAVLGMDVLCQAKSGHGKTAVFVLATLQQLEPVNGEVS 121
Query: 117 ALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL--KNECPQIVVGTP 174
LVLCHTRELA+QI +E+ RF+ Y+PD++V+ FYGG + ++L K +CP IVV TP
Sbjct: 122 VLVLCHTRELAFQIKNEYTRFAKYMPDVRVSTFYGGTPVTKDAEILRDKTKCPHIVVATP 181
Query: 175 GRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSK 234
GR+ ALARDK L KNV+HF+LDECDKMLE LDMRRDVQEIF+ TPH KQVMMFSATL+K
Sbjct: 182 GRLNALARDKVLDAKNVKHFVLDECDKMLEQLDMRRDVQEIFRTTPHHKQVMMFSATLAK 241
Query: 235 EIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIF 294
+IR CKKFM +P+EI+VDDE KLTLHGL QHY+KL E+ KN+KL++LLD L+FNQVVIF
Sbjct: 242 DIRITCKKFMANPLEIFVDDETKLTLHGLQQHYVKLEEVSKNKKLSELLDTLEFNQVVIF 301
Query: 295 VKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDI 354
VKSV+RA EL+KLLV CNFPSI IHSG+ QEER+ RY FK KRILVATD+ GRGID+
Sbjct: 302 VKSVARAIELDKLLVSCNFPSISIHSGLQQEERIKRYTAFKAFEKRILVATDIFGRGIDV 361
Query: 355 ERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV-SKF 407
ERVNIVINYD P AD+YLHRVGRAGRFGTKGLAITFVSS SD ++ + S+F
Sbjct: 362 ERVNIVINYDCPPDADSYLHRVGRAGRFGTKGLAITFVSSDSDQHVMGAIQSRF 415
>gi|448103531|ref|XP_004200058.1| Piso0_002620 [Millerozyma farinosa CBS 7064]
gi|359381480|emb|CCE81939.1| Piso0_002620 [Millerozyma farinosa CBS 7064]
Length = 435
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 276/420 (65%), Positives = 337/420 (80%), Gaps = 11/420 (2%)
Query: 7 NEYEDELLDYEEEDAQAPDSVATKANG--------EAAKKG-YVGIHSSGFRDFLLKPEL 57
+E ++ELLDY + + A + A A+ EA KKG YVGIH++GFRDFLLKPEL
Sbjct: 3 HEGQEELLDYSDSEEIAVPTTAQNASADGEGANEKEADKKGSYVGIHATGFRDFLLKPEL 62
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA 117
LRAI D GFEHPSEVQ CIPQ+ILG DV+CQAKSG+GKTAVFVLSTLQQ +P PG+++
Sbjct: 63 LRAIGDCGFEHPSEVQQVCIPQSILGTDVLCQAKSGLGKTAVFVLSTLQQLDPVPGEIST 122
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPG 175
+V+CHTRELAYQI +E+ RFS Y+PD+K VFYGG I + LKN+ CP I+V TPG
Sbjct: 123 VVICHTRELAYQIRNEYARFSKYMPDVKTEVFYGGTPIARDVEKLKNKDTCPHIIVATPG 182
Query: 176 RILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKE 235
R+ AL +K + L NV+ F++DECDK+LE++DMRRDVQ+IF+ TPH KQVMMFSATL+++
Sbjct: 183 RLHALVTEKSIRLNNVKSFVIDECDKVLEAVDMRRDVQDIFRNTPHQKQVMMFSATLAQD 242
Query: 236 IRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFV 295
IRPVCKKFMQ+P+EIYVDDEAKLTLHGL Q+YIKL E EKNRKL+DLLD+L+FNQV+IFV
Sbjct: 243 IRPVCKKFMQNPLEIYVDDEAKLTLHGLQQYYIKLDEKEKNRKLSDLLDSLEFNQVIIFV 302
Query: 296 KSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIE 355
KS RA ELNKLL CNFPSI +HSG+ QEER+ RY+ FKE NKRI V+TD+ GRGIDIE
Sbjct: 303 KSTQRANELNKLLCACNFPSIAVHSGLPQEERIERYRSFKEFNKRICVSTDVFGRGIDIE 362
Query: 356 RVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKFMFLLIGSF 415
R+N+ INYD+P AD YLHRVGRAGRFGTKGLAI+FVSS +D +ILN++ + I F
Sbjct: 363 RINLAINYDLPSEADQYLHRVGRAGRFGTKGLAISFVSSEADEEILNKIQSRFDVKITDF 422
>gi|343425824|emb|CBQ69357.1| probable ATP-dependent RNA helicase [Sporisorium reilianum SRZ2]
Length = 436
Score = 575 bits (1481), Expect = e-161, Method: Compositional matrix adjust.
Identities = 277/416 (66%), Positives = 332/416 (79%), Gaps = 17/416 (4%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAAKK-----------GYVGIHSSGFRDFLLK 54
DNE +L+DYEEE A A S A YVGIHS+GFRDFLLK
Sbjct: 5 DNE---DLIDYEEEVAVALTSTNGAAATGNGAAATADADKDKKGSYVGIHSTGFRDFLLK 61
Query: 55 PELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQ 114
PELLRAI D GFEHPSEVQ ECIPQ+ILGMDV+CQAKSGMGKTAVFVL+TLQQ EP G+
Sbjct: 62 PELLRAISDLGFEHPSEVQQECIPQSILGMDVVCQAKSGMGKTAVFVLATLQQIEPVDGE 121
Query: 115 VTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVG 172
V+ LVLCHTRELAYQI +E+ RF+ Y+PD++ V YGG + ++ +LK++ CP I+VG
Sbjct: 122 VSVLVLCHTRELAYQIRNEYARFTKYMPDVRTGVIYGGTPVAENQAMLKDKAKCPHILVG 181
Query: 173 TPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATL 232
TPGR+ AL RDK L + V+HF++DECDK+LE +DMRRDVQ+IF+ TPH KQVMMFSATL
Sbjct: 182 TPGRMNALVRDKSLKVSGVKHFVIDECDKILEQVDMRRDVQDIFRATPHHKQVMMFSATL 241
Query: 233 SKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVV 292
+KE+RP CKKFMQ+P+EIYVDDE KLTLHGL QHY++L E KNRKLNDLLD+L+FNQV+
Sbjct: 242 AKEVRPTCKKFMQNPLEIYVDDETKLTLHGLQQHYVRLEESAKNRKLNDLLDSLEFNQVI 301
Query: 293 IFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGI 352
IFVKS+SRA EL+KLL ECNFPSICIH G++QEER+ RY+ FK KRILVATD+ GRGI
Sbjct: 302 IFVKSISRANELDKLLRECNFPSICIHGGLAQEERIKRYQQFKNFEKRILVATDIFGRGI 361
Query: 353 DIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV-SKF 407
D+ERVN+ I+YD P AD+YLHRVGRAGRFGTKGLAI FVSS D+++L Q+ S+F
Sbjct: 362 DVERVNVSISYDTPTDADSYLHRVGRAGRFGTKGLAIMFVSSDEDAEVLKQIQSRF 417
>gi|344228997|gb|EGV60883.1| ATP-dependent RNA helicase SUB2 [Candida tenuis ATCC 10573]
Length = 431
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 277/408 (67%), Positives = 334/408 (81%), Gaps = 8/408 (1%)
Query: 8 EYEDELLDY---EEEDAQAPDSVATKAN-GEAAKKG-YVGIHSSGFRDFLLKPELLRAIV 62
E ++ELLDY EE P + AT N EA KKG YVGIH++GFRDFLLKPELLRAI
Sbjct: 4 EGQEELLDYSDSEEIAVTQPTTTATDGNEKEADKKGSYVGIHATGFRDFLLKPELLRAIG 63
Query: 63 DSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCH 122
D GFEHPS+VQ CIPQ+ILG DV+CQAKSG+GKTAVFVLSTLQQ +P PG+V+ LV+CH
Sbjct: 64 DCGFEHPSKVQQVCIPQSILGTDVLCQAKSGLGKTAVFVLSTLQQLDPVPGEVSTLVVCH 123
Query: 123 TRELAYQICHEFERFSTYLPDIKVAVFYGG--VNIKIHKDLLKNECPQIVVGTPGRILAL 180
TRELAYQI +E+ RFS Y+PD++ VFYGG +N + K K CP IVV TPGR+ AL
Sbjct: 124 TRELAYQIRNEYARFSKYMPDVRTEVFYGGTPINKDVAKLKDKETCPHIVVATPGRLHAL 183
Query: 181 ARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
DK L L N++ F++DECDK+L+S+DMRRDVQ+IF+ TPH KQVMMFSATLS+EIRP+C
Sbjct: 184 VNDKALRLNNIKSFVIDECDKVLDSVDMRRDVQDIFRATPHQKQVMMFSATLSQEIRPIC 243
Query: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSR 300
KKFMQ+P+EIYVDDEAKLTLHGL Q+Y+KL E EKNRKL+DLLD+L+FNQV+IFVKS R
Sbjct: 244 KKFMQNPLEIYVDDEAKLTLHGLQQYYLKLDEKEKNRKLSDLLDSLEFNQVIIFVKSTQR 303
Query: 301 AAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIV 360
A EL+KLL CNFPSI +HSG+ QEER+ RYK FKE NKRI V+TD+ GRGIDIER+N+
Sbjct: 304 ANELDKLLCACNFPSIAVHSGLKQEERIARYKSFKEFNKRICVSTDVFGRGIDIERINLA 363
Query: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV-SKF 407
INYD+P+ AD YLHRVGRAGRFGTKGLAI+FVS+ D ++L ++ S+F
Sbjct: 364 INYDLPNEADQYLHRVGRAGRFGTKGLAISFVSTPEDEEVLEKIQSRF 411
>gi|66532824|ref|XP_624894.1| PREDICTED: ATP-dependent RNA helicase WM6-like [Apis mellifera]
gi|380028013|ref|XP_003697706.1| PREDICTED: ATP-dependent RNA helicase WM6-like [Apis florea]
Length = 424
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 286/398 (71%), Positives = 330/398 (82%), Gaps = 2/398 (0%)
Query: 11 DELLDYEEEDA--QAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEH 68
D+LLDYE+E+ Q D + K YV IHSSGFRDFLLKPE+LRAI+D GFEH
Sbjct: 5 DDLLDYEDEEQTEQLVDGSRDTPAKKEVKGTYVSIHSSGFRDFLLKPEILRAIIDCGFEH 64
Query: 69 PSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAY 128
PSEVQHECIPQA+LGMD++CQAKSGMGKTAVFVL+TLQQ E QV LV+CHTRELA+
Sbjct: 65 PSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLELTENQVYVLVMCHTRELAF 124
Query: 129 QICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSL 188
QI E+ERFS Y+P +KV VF+GG+ I+ +++LKN CP IVVGTPGRILAL R+K L+L
Sbjct: 125 QISKEYERFSKYMPHVKVGVFFGGLPIQKDEEVLKNTCPHIVVGTPGRILALVRNKKLNL 184
Query: 189 KNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPM 248
K+++HFILDECDKMLE LDMRRDVQEIF+ TPH KQVMMFSATLSKEIRPVCKKFMQDPM
Sbjct: 185 KHLKHFILDECDKMLELLDMRRDVQEIFRSTPHGKQVMMFSATLSKEIRPVCKKFMQDPM 244
Query: 249 EIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLL 308
E+YVDDEAKLTLHGL QHY+KL E EKN+KL +LLD L+FNQVVIFVKSV R L +LL
Sbjct: 245 EVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCMALAQLL 304
Query: 309 VECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDS 368
E NFP+I IH GM+QEERL+RY+ FK+ KRILVAT+L GRG+DIERVNIV NYDMP+
Sbjct: 305 TEQNFPAIGIHRGMTQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPED 364
Query: 369 ADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
+DTYLHRV RAGRFGTKGLAIT VS SD+ ILN V +
Sbjct: 365 SDTYLHRVARAGRFGTKGLAITLVSDESDAKILNDVQE 402
>gi|351711520|gb|EHB14439.1| ATP-dependent RNA helicase DDX39 [Heterocephalus glaber]
Length = 419
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 272/383 (71%), Positives = 318/383 (83%), Gaps = 8/383 (2%)
Query: 22 QAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAI 81
QAP + K YV IHSSGFRD AIVD GFEHPSEVQHECIPQAI
Sbjct: 20 QAPPESTPTLPKKDVKGSYVSIHSSGFRD--------XAIVDCGFEHPSEVQHECIPQAI 71
Query: 82 LGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYL 141
LGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTRELA+QI E+ERFS Y+
Sbjct: 72 LGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVSVLVMCHTRELAFQISKEYERFSKYM 131
Query: 142 PDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDK 201
P++KV+VF+GG++IK +D+LK CP +VVGTPGRILAL R++ L+LKNV+HF+LDECDK
Sbjct: 132 PNVKVSVFFGGLSIKKDEDVLKRNCPHVVVGTPGRILALVRNRSLNLKNVKHFVLDECDK 191
Query: 202 MLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH 261
MLE LDMRRDVQEIF++TPH+KQ MMFSATLSKEIRPVC+KFMQDPME++VDDE KLTLH
Sbjct: 192 MLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLH 251
Query: 262 GLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSG 321
GL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L +LLVE NFP+I IH G
Sbjct: 252 GLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRG 311
Query: 322 MSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 381
M+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYDMP+ +DTYLHRV RAGR
Sbjct: 312 MAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGR 371
Query: 382 FGTKGLAITFVSSASDSDILNQV 404
FGTKGLA+TFVS +D+ ILN V
Sbjct: 372 FGTKGLAVTFVSDENDAKILNDV 394
>gi|448099687|ref|XP_004199205.1| Piso0_002620 [Millerozyma farinosa CBS 7064]
gi|359380627|emb|CCE82868.1| Piso0_002620 [Millerozyma farinosa CBS 7064]
Length = 435
Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust.
Identities = 275/420 (65%), Positives = 337/420 (80%), Gaps = 11/420 (2%)
Query: 7 NEYEDELLDYEEEDAQAPDSVATKANG--------EAAKKG-YVGIHSSGFRDFLLKPEL 57
+E ++ELLDY + + A + A A+ EA KKG YVGIH++GFRDFLLKPEL
Sbjct: 3 HEGQEELLDYSDSEEIAVPTTAQNASADGEGANDKEADKKGSYVGIHATGFRDFLLKPEL 62
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA 117
LRAI D GFEHPSEVQ CIPQ+ILG DV+CQAKSG+GKTAVFVLSTLQQ +P PG+++
Sbjct: 63 LRAIGDCGFEHPSEVQQVCIPQSILGTDVLCQAKSGLGKTAVFVLSTLQQLDPVPGEIST 122
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPG 175
+V+CHTRELAYQI +E+ RFS Y+PD+K VFYGG I + LKN+ CP I+V TPG
Sbjct: 123 VVICHTRELAYQIRNEYARFSKYMPDVKTEVFYGGTPIARDVEKLKNKDTCPHIIVATPG 182
Query: 176 RILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKE 235
R+ AL +K + L NV+ F++DECDK+LE++DMRRDVQ+IF+ TPH KQVMMFSATL+++
Sbjct: 183 RLHALVTEKSIRLNNVKSFVIDECDKVLEAVDMRRDVQDIFRNTPHQKQVMMFSATLAQD 242
Query: 236 IRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFV 295
IRPVCKKFMQ+P+EIYVDDEAKLTLHGL Q+YIKL E +KNRKL+DLLD+L+FNQV+IFV
Sbjct: 243 IRPVCKKFMQNPLEIYVDDEAKLTLHGLQQYYIKLDEKDKNRKLSDLLDSLEFNQVIIFV 302
Query: 296 KSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIE 355
KS RA ELNKLL CNFPSI +HSG+ QEER+ RY+ FKE NKRI V+TD+ GRGIDIE
Sbjct: 303 KSTQRANELNKLLCACNFPSIAVHSGLPQEERIERYRSFKEFNKRICVSTDVFGRGIDIE 362
Query: 356 RVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKFMFLLIGSF 415
R+N+ INYD+P AD YLHRVGRAGRFGTKGLAI+FVSS +D +ILN++ + I F
Sbjct: 363 RINLAINYDLPSEADQYLHRVGRAGRFGTKGLAISFVSSEADEEILNKIQSRFDVKITDF 422
>gi|393247739|gb|EJD55246.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 440
Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust.
Identities = 279/424 (65%), Positives = 336/424 (79%), Gaps = 20/424 (4%)
Query: 1 MGETRDNEYEDELLDYEEEDAQAPDSVATKANG--------------EAAKKGYVGIHSS 46
M DNE EL+DYEE+ + A + KK + GIHS+
Sbjct: 1 MSGALDNE---ELIDYEEDQEVTTTTNGAPAPAAAQNGAAAPAAAAADGDKKNFTGIHST 57
Query: 47 GFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQ 106
GFRDFLLKPELLR+I D GFEHPSEVQ ECIPQA+ GMDV+CQAKSG GKTAVFVL+TLQ
Sbjct: 58 GFRDFLLKPELLRSISDLGFEHPSEVQQECIPQAVFGMDVLCQAKSGHGKTAVFVLATLQ 117
Query: 107 QTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE- 165
Q EP G+V+ +VLCHTRELA+QI +E+ RF+ Y+P+I+ +VFYGG ++ ++LK++
Sbjct: 118 QLEPVNGEVSVIVLCHTRELAFQIRNEYIRFAKYMPEIRTSVFYGGTPVQKDAEILKDKA 177
Query: 166 -CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQ 224
CP I+V TPGR+ ALARDK L +V+HF+LDECDKMLE LDMRRDVQEIF++TPH KQ
Sbjct: 178 KCPHIIVATPGRLNALARDKVLDATHVKHFVLDECDKMLEQLDMRRDVQEIFRVTPHHKQ 237
Query: 225 VMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLD 284
VMMFSATL+K+IR CKKFM +P+EI+VDDE KLTLHGL QHY+KL E+ KNRKLNDLLD
Sbjct: 238 VMMFSATLAKDIRVTCKKFMTNPLEIFVDDETKLTLHGLQQHYVKLDEVAKNRKLNDLLD 297
Query: 285 ALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVA 344
LDFNQVVIFVKSV+RA EL+KLL EC+FPSICIHSG+ QEER+TRY+ FK KRILVA
Sbjct: 298 TLDFNQVVIFVKSVARANELDKLLKECHFPSICIHSGLPQEERITRYQQFKSFEKRILVA 357
Query: 345 TDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
TD+ GRGID+ERVNIV+NYD P AD+YLHRVGRAGRFGTKGLAITF+SS +D D++NQ+
Sbjct: 358 TDIFGRGIDVERVNIVVNYDCPGDADSYLHRVGRAGRFGTKGLAITFISSETDQDVMNQI 417
Query: 405 -SKF 407
S+F
Sbjct: 418 QSRF 421
>gi|126135590|ref|XP_001384319.1| Suppressor of the cold-sensitive snRNP biogenesis mutant brr1-1
[Scheffersomyces stipitis CBS 6054]
gi|146325738|sp|A3LST5.1|SUB2_PICST RecName: Full=ATP-dependent RNA helicase SUB2
gi|126091517|gb|ABN66290.1| Suppressor of the cold-sensitive snRNP biogenesis mutant brr1-1
[Scheffersomyces stipitis CBS 6054]
Length = 433
Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust.
Identities = 277/418 (66%), Positives = 334/418 (79%), Gaps = 9/418 (2%)
Query: 7 NEYEDELLDYEE-EDAQAPDSVA-----TKANGEAAKKG-YVGIHSSGFRDFLLKPELLR 59
+E ++ELLDY + E+ P + + + EA KKG YVGIH++GFRDFLLKPELLR
Sbjct: 3 HEGQEELLDYSDSEEIAVPTTTEVAGADSATDKEADKKGSYVGIHATGFRDFLLKPELLR 62
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
AI D GFEHPSEVQ CIPQ+ILG DV+CQAKSG+GKTAVFVLSTLQQ +P PG+++ LV
Sbjct: 63 AIGDCGFEHPSEVQQVCIPQSILGTDVLCQAKSGLGKTAVFVLSTLQQLDPVPGEISTLV 122
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIK--IHKDLLKNECPQIVVGTPGRI 177
+CHTRELAYQI +E+ RFS Y+PD+K VFYGG IK I K K+ CP IVV TPGR+
Sbjct: 123 ICHTRELAYQIRNEYARFSKYMPDVKTEVFYGGTPIKRDIEKLKSKDTCPHIVVATPGRL 182
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
AL +K + L NV+ F++DECDK+LES+DMRRDVQ+IF+ TPH KQVMMFSATLS+EIR
Sbjct: 183 HALVNEKAIRLSNVKSFVIDECDKVLESIDMRRDVQDIFRATPHQKQVMMFSATLSQEIR 242
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 297
PVCKKFMQ+P+EIYVDDEAKLTLHGL Q+YIKL E EKNRKL+DLLD+L+FNQV+IFVKS
Sbjct: 243 PVCKKFMQNPLEIYVDDEAKLTLHGLQQYYIKLEEKEKNRKLSDLLDSLEFNQVIIFVKS 302
Query: 298 VSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERV 357
RA ELNKLL CNFPSI +HSG+ QEER+ RY+ FKE NKRI V+TD+ GRGIDIER+
Sbjct: 303 TQRANELNKLLCSCNFPSIAVHSGLPQEERIERYRSFKEFNKRICVSTDVFGRGIDIERI 362
Query: 358 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKFMFLLIGSF 415
N+ INYD+P+ AD YLHRVGRAGRFGTKGLAI+ V S D ++L ++ + I F
Sbjct: 363 NLAINYDLPNEADQYLHRVGRAGRFGTKGLAISLVGSKEDEEVLEKIQSRFDVKITEF 420
>gi|164657043|ref|XP_001729648.1| hypothetical protein MGL_3192 [Malassezia globosa CBS 7966]
gi|159103541|gb|EDP42434.1| hypothetical protein MGL_3192 [Malassezia globosa CBS 7966]
Length = 435
Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust.
Identities = 276/413 (66%), Positives = 334/413 (80%), Gaps = 16/413 (3%)
Query: 11 DELLDYEEE-----------DAQAPDSVATKANG-EAAKKG-YVGIHSSGFRDFLLKPEL 57
++L+DYEEE D A A +G E KKG YVGIHS+GFRDFLLKPEL
Sbjct: 4 EDLIDYEEEVSVPPSGTTQADTNASAGAAPAGDGDEGNKKGSYVGIHSTGFRDFLLKPEL 63
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA 117
LRAI D GFEHPSEVQ ECIPQ+ILGMDV+CQAKSGMGKTAVFVL++LQQ EP G+V+
Sbjct: 64 LRAISDLGFEHPSEVQQECIPQSILGMDVVCQAKSGMGKTAVFVLASLQQLEPVDGEVSV 123
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL--KNECPQIVVGTPG 175
LVLCHTRELAYQI +E+ RF+ Y+P+++ +V YGG IK + +L K +CP I+VGTPG
Sbjct: 124 LVLCHTRELAYQIRNEYARFTKYMPEVRTSVVYGGTPIKEDQAMLADKAKCPHILVGTPG 183
Query: 176 RILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKE 235
R+ L RDK L +V+HF++DECDK+L++LDMRRDVQEIF+ TPH KQVMMFSATL+KE
Sbjct: 184 RMNGLVRDKSLKAGDVKHFVIDECDKILDNLDMRRDVQEIFRATPHHKQVMMFSATLAKE 243
Query: 236 IRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFV 295
IRP CKKFMQ+P+EIYVDDE KLTLHGL Q+Y++L E KNRKLNDLLD L+FNQV+IFV
Sbjct: 244 IRPTCKKFMQNPLEIYVDDETKLTLHGLQQYYVRLEEAGKNRKLNDLLDTLEFNQVIIFV 303
Query: 296 KSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIE 355
KS+SRA +L++LL ECNFPSICIH G+ Q+ER+ RY+ FK KRILVATD+ GRGID+E
Sbjct: 304 KSISRANQLDQLLRECNFPSICIHGGLPQDERIKRYQQFKNFEKRILVATDIFGRGIDVE 363
Query: 356 RVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV-SKF 407
RVN+ I+YD P AD+YLHRVGRAGRFGTKGLAITFVSS D+++L Q+ S+F
Sbjct: 364 RVNVSISYDTPSDADSYLHRVGRAGRFGTKGLAITFVSSDEDAEVLKQIQSRF 416
>gi|156550340|ref|XP_001606535.1| PREDICTED: ATP-dependent RNA helicase WM6-like [Nasonia
vitripennis]
Length = 425
Score = 573 bits (1477), Expect = e-161, Method: Compositional matrix adjust.
Identities = 285/402 (70%), Positives = 333/402 (82%), Gaps = 9/402 (2%)
Query: 11 DELLDYEEEDAQAPDSVATKANGEAA------KKGYVGIHSSGFRDFLLKPELLRAIVDS 64
D+LLDYE+E+ + NGE A K YV IHSSGFRDFLLKPE+LRAIVD
Sbjct: 5 DDLLDYEDEEQTEQ---IVEGNGEVAPAKKEVKGTYVSIHSSGFRDFLLKPEILRAIVDC 61
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFEHPSEVQHECIPQA+LGMD++CQAKSGMGKTAVFVL+TLQQ E V LV+CHTR
Sbjct: 62 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLESTENHVYVLVMCHTR 121
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDK 184
ELA+QI E+ERFS Y+ ++KV+VF+GG+ I+ +++LKN CP IVVGTPGRILAL + K
Sbjct: 122 ELAFQISKEYERFSKYMQNVKVSVFFGGLPIQKDEEVLKNTCPHIVVGTPGRILALIKSK 181
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 244
L+LK+++HF+LDECDKMLE LDMR+DVQEIF+ TPH KQVMMFSATLSKEIRPVCKKFM
Sbjct: 182 KLNLKHLKHFVLDECDKMLEQLDMRKDVQEIFRSTPHGKQVMMFSATLSKEIRPVCKKFM 241
Query: 245 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 304
QDPME+YVDDEAKLTLHGL QHYIKL E EKN+KL +LLD L+FNQVVIFVKSV R L
Sbjct: 242 QDPMEVYVDDEAKLTLHGLQQHYIKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCMAL 301
Query: 305 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 364
+LL E NFP+I IH GM+QEERLT+Y+ FK+ KRILVAT+L GRG+DIERVNIV NYD
Sbjct: 302 AQLLTEQNFPAIGIHRGMTQEERLTKYQSFKDFQKRILVATNLFGRGMDIERVNIVFNYD 361
Query: 365 MPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
MP+++DTYLHRV RAGRFGTKGLAITF+S SD+ ILN V +
Sbjct: 362 MPENSDTYLHRVARAGRFGTKGLAITFISDESDAKILNDVQE 403
>gi|24581952|ref|NP_723089.1| helicase at 25E, isoform A [Drosophila melanogaster]
gi|24581954|ref|NP_723090.1| helicase at 25E, isoform B [Drosophila melanogaster]
gi|24581956|ref|NP_723091.1| helicase at 25E, isoform C [Drosophila melanogaster]
gi|195342749|ref|XP_002037961.1| GM18014 [Drosophila sechellia]
gi|195550904|ref|XP_002076131.1| GD11981 [Drosophila simulans]
gi|2500532|sp|Q27268.1|UAP56_DROME RecName: Full=ATP-dependent RNA helicase WM6; Short=DEAD box
protein UAP56; Short=Dmrnahel; AltName: Full=HEL/UAP56
gi|158313|gb|AAB65835.1| DECD family putative RNA helicase [Drosophila melanogaster]
gi|505583|emb|CAA56197.1| WM6 [Drosophila melanogaster]
gi|7296990|gb|AAF52261.1| helicase at 25E, isoform A [Drosophila melanogaster]
gi|21430206|gb|AAM50781.1| LD23644p [Drosophila melanogaster]
gi|22945674|gb|AAN10544.1| helicase at 25E, isoform B [Drosophila melanogaster]
gi|22945675|gb|AAN10545.1| helicase at 25E, isoform C [Drosophila melanogaster]
gi|194132811|gb|EDW54379.1| GM18014 [Drosophila sechellia]
gi|194201780|gb|EDX15356.1| GD11981 [Drosophila simulans]
gi|220946752|gb|ACL85919.1| Hel25E-PA [synthetic construct]
gi|220956384|gb|ACL90735.1| Hel25E-PA [synthetic construct]
Length = 424
Score = 573 bits (1477), Expect = e-161, Method: Compositional matrix adjust.
Identities = 285/399 (71%), Positives = 331/399 (82%), Gaps = 8/399 (2%)
Query: 11 DELLDYEEEDAQAPDSVATKANGEAAKKG----YVGIHSSGFRDFLLKPELLRAIVDSGF 66
D+LLDYE+E+ +V N EA KK YV IHSSGFRDFLLKPE+LRAIVD GF
Sbjct: 5 DDLLDYEDEEQTETTAVE---NQEAPKKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCGF 61
Query: 67 EHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVT-ALVLCHTRE 125
EHPSEVQHECIPQA+LGMD++CQAKSGMGKTAVFVL+TLQQ EP+ LV+CHTRE
Sbjct: 62 EHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSDNNTCHVLVMCHTRE 121
Query: 126 LAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKD 185
LA+QI E+ERFS Y+P +KVAVF+GG+ I+ ++ LK+ P IVVGTPGRILAL R+K
Sbjct: 122 LAFQISKEYERFSKYMPTVKVAVFFGGMAIQKDEETLKSGTPHIVVGTPGRILALIRNKK 181
Query: 186 LSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQ 245
L+LK ++HF+LDECDKMLE LDMRRDVQEIF+ TPH KQVMMFSATLSK+IRPVCKKFMQ
Sbjct: 182 LNLKLLKHFVLDECDKMLEQLDMRRDVQEIFRSTPHGKQVMMFSATLSKDIRPVCKKFMQ 241
Query: 246 DPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELN 305
DPME+YVDDEAKLTLHGL QHY+ L E EKN+KL +LLD L+FNQVVIFVKSV R L+
Sbjct: 242 DPMEVYVDDEAKLTLHGLQQHYVNLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCVALS 301
Query: 306 KLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDM 365
+LL E NFP+I IH GM+QEERL RY+ FK+ KRILVAT+L GRG+DIERVNIV NYDM
Sbjct: 302 QLLTEQNFPAIGIHRGMTQEERLNRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDM 361
Query: 366 PDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
P+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN+V
Sbjct: 362 PEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNEV 400
>gi|340718595|ref|XP_003397750.1| PREDICTED: ATP-dependent RNA helicase WM6-like [Bombus terrestris]
gi|350409690|ref|XP_003488817.1| PREDICTED: ATP-dependent RNA helicase WM6-like [Bombus impatiens]
Length = 424
Score = 573 bits (1477), Expect = e-161, Method: Compositional matrix adjust.
Identities = 286/398 (71%), Positives = 330/398 (82%), Gaps = 2/398 (0%)
Query: 11 DELLDYEEEDA--QAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEH 68
D+LLDYE+E+ Q D + K YV IHSSGFRDFLLKPE+LRAI+D GFEH
Sbjct: 5 DDLLDYEDEEQTEQLVDGSRDTPAKKEVKGTYVSIHSSGFRDFLLKPEILRAIIDCGFEH 64
Query: 69 PSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAY 128
PSEVQHECIPQA+LGMD++CQAKSGMGKTAVFVL+TLQQ E QV LV+CHTRELA+
Sbjct: 65 PSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLELTENQVYVLVMCHTRELAF 124
Query: 129 QICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSL 188
QI E+ERFS Y+P +KV VF+GG+ I+ +++LKN CP IVVGTPGRILAL R+K L+L
Sbjct: 125 QISKEYERFSKYMPHVKVGVFFGGLPIQKDEEVLKNVCPHIVVGTPGRILALVRNKKLNL 184
Query: 189 KNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPM 248
K+++HFILDECDKMLE LDMRRDVQEIF+ TPH KQVMMFSATLSKEIRPVCKKFMQDPM
Sbjct: 185 KHLKHFILDECDKMLELLDMRRDVQEIFRSTPHGKQVMMFSATLSKEIRPVCKKFMQDPM 244
Query: 249 EIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLL 308
E+YVDDEAKLTLHGL QHY+KL E EKN+KL +LLD L+FNQVVIFVKSV R L +LL
Sbjct: 245 EVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCMALAQLL 304
Query: 309 VECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDS 368
E NFP+I IH GM+QEERL+RY+ FK+ KRILVAT+L GRG+DIERVNIV NYDMP+
Sbjct: 305 TEQNFPAIGIHRGMTQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPED 364
Query: 369 ADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
+DTYLHRV RAGRFGTKGLAIT VS SD+ ILN V +
Sbjct: 365 SDTYLHRVARAGRFGTKGLAITLVSDESDAKILNDVQE 402
>gi|392571877|gb|EIW65049.1| P-loop containing nucleoside triphosphate hydrolase protein
[Trametes versicolor FP-101664 SS1]
Length = 440
Score = 572 bits (1475), Expect = e-160, Method: Compositional matrix adjust.
Identities = 283/425 (66%), Positives = 329/425 (77%), Gaps = 27/425 (6%)
Query: 4 TRDNEYEDELLDYEEED------------------AQAPDSVATKANGEAAKKGYVGIHS 45
+ DNE EL+DYE+E + AP A GE KK + GIHS
Sbjct: 3 SHDNE---ELIDYEDEHDVVTNGAAATTATNGAVTSTAP---AADGEGEKDKKNFSGIHS 56
Query: 46 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTL 105
+GFRDFLLKPELLRAI D GFEHPSEVQ ECIPQA+LGMDV+CQAKSG GKTAVFVL+TL
Sbjct: 57 TGFRDFLLKPELLRAISDLGFEHPSEVQQECIPQAVLGMDVLCQAKSGHGKTAVFVLATL 116
Query: 106 QQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL--K 163
QQ EP G+V+ +VLCHTRELA+QI +E+ RF+ Y+PD++V FYGG + +LL K
Sbjct: 117 QQLEPVNGEVSVIVLCHTRELAFQIKNEYARFAKYMPDVRVGTFYGGTPVAKDAELLRDK 176
Query: 164 NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDK 223
+CP IVV TPGR+ AL RDK L V+HFILDECDKMLE LDMRRDVQEIF+ TPH K
Sbjct: 177 TKCPHIVVATPGRLNALVRDKVLDASKVKHFILDECDKMLEQLDMRRDVQEIFRATPHHK 236
Query: 224 QVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLL 283
QVMMFSATL+K+IR CKKFM +P+EI+VDDE KLTLHGL QHY+KL E+ KNRKLN+LL
Sbjct: 237 QVMMFSATLAKDIRITCKKFMANPLEIFVDDETKLTLHGLQQHYVKLEEVGKNRKLNELL 296
Query: 284 DALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILV 343
D L+FNQVVIFVKSV+RA EL+KLLV CNFPSI IHSG++QEER+ RY FK KRILV
Sbjct: 297 DTLEFNQVVIFVKSVARAIELDKLLVSCNFPSIAIHSGLAQEERIARYTAFKAFEKRILV 356
Query: 344 ATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQ 403
ATD+ GRGID+ERVNIVINYD P AD+YLHRVGRAGRFGTKGLAITFVSS SD ++
Sbjct: 357 ATDIFGRGIDVERVNIVINYDSPPDADSYLHRVGRAGRFGTKGLAITFVSSESDQQVMAA 416
Query: 404 V-SKF 407
+ S+F
Sbjct: 417 IQSRF 421
>gi|332019236|gb|EGI59746.1| ATP-dependent RNA helicase WM6 [Acromyrmex echinatior]
Length = 428
Score = 572 bits (1474), Expect = e-160, Method: Compositional matrix adjust.
Identities = 285/398 (71%), Positives = 330/398 (82%), Gaps = 2/398 (0%)
Query: 11 DELLDYEEEDA--QAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEH 68
D+LLDYE+E+ Q D + + K YV IHSSGFRDFLLKPE+LRAIVD GFEH
Sbjct: 5 DDLLDYEDEEQTEQVVDGSGDVPSKKEVKGTYVSIHSSGFRDFLLKPEILRAIVDCGFEH 64
Query: 69 PSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAY 128
PSEVQHECIPQA+LGMD++CQAKSGMGKTAVFVL+TLQQ E QV LV+CHTRELA+
Sbjct: 65 PSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLELTENQVYVLVMCHTRELAF 124
Query: 129 QICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSL 188
QI E+ERFS Y+P +KV VF+GG+ I+ +++LK CP IVVGTPGRILAL R+K L+L
Sbjct: 125 QISKEYERFSKYMPHVKVGVFFGGLPIQKDEEMLKTVCPHIVVGTPGRILALVRNKKLNL 184
Query: 189 KNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPM 248
K+++HFILDECDKMLE LDMRRDVQEIF+ TPH KQVMMFSATLSKEIRPVCKKFMQDPM
Sbjct: 185 KHLKHFILDECDKMLELLDMRRDVQEIFRSTPHSKQVMMFSATLSKEIRPVCKKFMQDPM 244
Query: 249 EIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLL 308
E+YVDDEAKLTL+GL QHY+KL E EKN+KL +LLD L+FNQVVIFVKSV R L +LL
Sbjct: 245 EVYVDDEAKLTLNGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCMALAQLL 304
Query: 309 VECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDS 368
E NFP+I IH GM+QEERL+RY+ FK+ KRILVAT+L GRG+DIERVNIV NYDMP+
Sbjct: 305 TEQNFPAIGIHRGMTQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPED 364
Query: 369 ADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
+DTYLHRV RAGRFGTKGLAIT VS SD+ ILN V +
Sbjct: 365 SDTYLHRVARAGRFGTKGLAITLVSDESDAKILNDVQE 402
>gi|261189163|ref|XP_002620993.1| ATP-dependent RNA helicase SUB2 [Ajellomyces dermatitidis SLH14081]
gi|239591778|gb|EEQ74359.1| ATP-dependent RNA helicase SUB2 [Ajellomyces dermatitidis SLH14081]
gi|239614696|gb|EEQ91683.1| ATP-dependent RNA helicase SUB2 [Ajellomyces dermatitidis ER-3]
gi|327354159|gb|EGE83016.1| ATP-dependent RNA helicase SUB2 [Ajellomyces dermatitidis ATCC
18188]
Length = 443
Score = 572 bits (1474), Expect = e-160, Method: Compositional matrix adjust.
Identities = 280/420 (66%), Positives = 338/420 (80%), Gaps = 22/420 (5%)
Query: 9 YEDELLDYEEEDAQAPDSVA-------------------TKANGEAAKKG-YVGIHSSGF 48
+E++L+DY +E+ QA D+ A T A A KKG YVGIHS+GF
Sbjct: 3 HEEDLIDYSDEELQATDATATTTAAAGANGAAPKKEGDLTVAGARADKKGSYVGIHSTGF 62
Query: 49 RDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQT 108
RDFLLK ELLRAI D GFEHPSEVQ CIP AIL +DV+CQAKSG+GKTAVFVL+TL Q
Sbjct: 63 RDFLLKGELLRAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTLHQL 122
Query: 109 EPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL--KNEC 166
EP PG+ + LV+CHTRELAYQI +E+ RFS YLPD+K AVFYGG ++ +LL K+
Sbjct: 123 EPVPGECSILVMCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPMQKDIELLSSKDTY 182
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
P IVVGTPGR+ AL RDK LSL+N++ F+LDECDKML+ +DMRRDVQEIF+ TP DKQVM
Sbjct: 183 PNIVVGTPGRLNALVRDKKLSLRNIKAFVLDECDKMLDQIDMRRDVQEIFRATPADKQVM 242
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
MFSATLS+E+RP+CKKFM++P+E+YVDD+ KLTLHGL+Q+YIKLSE EKNRKLN+LLD+L
Sbjct: 243 MFSATLSQEVRPICKKFMRNPLEVYVDDDTKLTLHGLLQYYIKLSESEKNRKLNELLDSL 302
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
+FNQV+IFVKS RA+EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD
Sbjct: 303 EFNQVIIFVKSTQRASELDKLLRECNFPSIAVHSGVSQEERIKRYKEFKEFNKRICVATD 362
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
+ GRGIDIER+N+ INYD+P AD+YLHRVGRAGRFGTKGLAI+FVSS D ++L + K
Sbjct: 363 VFGRGIDIERINLAINYDLPADADSYLHRVGRAGRFGTKGLAISFVSSEQDQEVLKDIEK 422
>gi|395326047|gb|EJF58461.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dichomitus squalens LYAD-421 SS1]
Length = 438
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 282/418 (67%), Positives = 329/418 (78%), Gaps = 19/418 (4%)
Query: 6 DNEYEDELLDYEEE-------------DAQAPDSVATKANGEAAKKGYVGIHSSGFRDFL 52
DNE EL+DYE+E + A + A +GE KK + GIHS+GFRDFL
Sbjct: 5 DNE---ELIDYEDEHDVVTNGPPAAAGNGSAVAAPAADGDGEKDKKNFSGIHSTGFRDFL 61
Query: 53 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNP 112
LKPELLRAI D GFEHPSEVQ ECIPQA+LGMDV+CQAKSG GKTAVFVL+TLQQ EP
Sbjct: 62 LKPELLRAISDLGFEHPSEVQQECIPQAVLGMDVLCQAKSGHGKTAVFVLATLQQLEPVN 121
Query: 113 GQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL--KNECPQIV 170
G+V+ +VLCHTRELA+QI +E+ RF+ Y+PD++V F+GG + DLL K++CP IV
Sbjct: 122 GEVSVIVLCHTRELAFQIRNEYSRFAKYMPDVRVNTFFGGTPVVKDADLLRDKSKCPHIV 181
Query: 171 VGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSA 230
V TPGR+ AL RDK L ++HFILDECDKMLE LDMRRDVQEIF+ TP KQVMMFSA
Sbjct: 182 VATPGRLNALVRDKVLDASKIKHFILDECDKMLEQLDMRRDVQEIFRATPLHKQVMMFSA 241
Query: 231 TLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQ 290
TL+KEIR CKKFM P+EI+VDDE KLTLHGL QHY+KL E+ KNRKLN+LLD LDFNQ
Sbjct: 242 TLAKEIRITCKKFMDHPLEIFVDDETKLTLHGLQQHYVKLEEVAKNRKLNELLDTLDFNQ 301
Query: 291 VVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGR 350
VVIFVKSV+RA EL+KLLV CNFPSI IHSG++QEER++RY FK KRILVATD+ GR
Sbjct: 302 VVIFVKSVARAIELDKLLVSCNFPSIAIHSGLAQEERISRYTAFKAFEKRILVATDIFGR 361
Query: 351 GIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV-SKF 407
GID+ERVNIVINYD P AD+YLHRVGRAGRFGTKGLAITFVSS SD ++ + S+F
Sbjct: 362 GIDVERVNIVINYDCPPDADSYLHRVGRAGRFGTKGLAITFVSSESDQQVMAAIQSRF 419
>gi|169844510|ref|XP_001828976.1| ATP-dependent RNA helicase SUB2 [Coprinopsis cinerea okayama7#130]
gi|116510088|gb|EAU92983.1| ATP-dependent RNA helicase SUB2 [Coprinopsis cinerea okayama7#130]
Length = 432
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 280/407 (68%), Positives = 327/407 (80%), Gaps = 10/407 (2%)
Query: 11 DELLDYEEEDAQAPDSVATKANGEAA-------KKGYVGIHSSGFRDFLLKPELLRAIVD 63
++L+DYE+E P A + G A KK + GIHS+GFRDFLLKPELLRAI D
Sbjct: 7 EDLIDYEDEHDIVPSGGAAASAGAAGGAGDAGDKKNFSGIHSTGFRDFLLKPELLRAISD 66
Query: 64 SGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHT 123
GFEHPSEVQ ECIPQA+LGMDV+CQAKSG GKTAVFVL+TLQQ EP G+V+ LVLCHT
Sbjct: 67 LGFEHPSEVQQECIPQAVLGMDVLCQAKSGHGKTAVFVLATLQQLEPVNGEVSVLVLCHT 126
Query: 124 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL--KNECPQIVVGTPGRILALA 181
RELA+QI +E+ RF+ Y+PD++V+ FYGG + ++L K +CP IVV TPGR+ ALA
Sbjct: 127 RELAFQIKNEYTRFAKYMPDVRVSTFYGGTPVAKDAEILRDKTKCPHIVVATPGRLNALA 186
Query: 182 RDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCK 241
RDK L KNV+HF+LDECDKMLE LDMRRDVQEIF+MTPH KQVMMFSATL+KEIR CK
Sbjct: 187 RDKVLDAKNVKHFVLDECDKMLEQLDMRRDVQEIFRMTPHHKQVMMFSATLAKEIRATCK 246
Query: 242 KFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRA 301
KFM +P+EI+VDDE KLTLHGL QHY+KL E KNRKLN+LLD L+FNQVVIFVKSV+RA
Sbjct: 247 KFMANPLEIFVDDETKLTLHGLQQHYVKLEEAGKNRKLNELLDNLEFNQVVIFVKSVARA 306
Query: 302 AELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVI 361
EL+KLLV CNFPSI IHSG+ QEER+ RY FK KRILVATD+ GRGID+ERVNIV+
Sbjct: 307 IELDKLLVSCNFPSIAIHSGLQQEERIKRYTAFKAFEKRILVATDIFGRGIDVERVNIVV 366
Query: 362 NYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV-SKF 407
NYD P AD+YLHRVGRAGRFGTKGLAITFVSS +D + + S+F
Sbjct: 367 NYDCPPDADSYLHRVGRAGRFGTKGLAITFVSSDTDQQTMASIQSRF 413
>gi|353241933|emb|CCA73713.1| probable SUB2-mRNA export protein, member of the DEAD-box RNA
helicase superfamily [Piriformospora indica DSM 11827]
Length = 444
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 276/402 (68%), Positives = 327/402 (81%), Gaps = 6/402 (1%)
Query: 12 ELLDYEEE----DAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFE 67
EL DYE+E + A E KK Y GIHSSGFRDFLLK ELLRAI D GFE
Sbjct: 5 ELADYEDEPEYPTVAGAGAGAVAGTEEGDKKNYAGIHSSGFRDFLLKQELLRAISDLGFE 64
Query: 68 HPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELA 127
HPSEVQ ECIPQAILGMDV+CQAKSG GKTAVFVL+TLQQ + + +V+ +VLCHTRELA
Sbjct: 65 HPSEVQQECIPQAILGMDVLCQAKSGHGKTAVFVLATLQQLDTSENKVSVIVLCHTRELA 124
Query: 128 YQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKN-ECPQIVVGTPGRILALARDKDL 186
+QI +E+ RF+ Y+PD++ AVFYGG ++ ++LLK+ E P I+V TPGR+ ALARDK L
Sbjct: 125 FQIKNEYSRFARYMPDVRTAVFYGGTPVQKDQELLKSAEVPHIIVATPGRLNALARDKSL 184
Query: 187 SLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQD 246
+ V+HF+LDECDKMLE LDMRRDVQEIF++TPH KQVMMFSATLSKEIR CKKFM +
Sbjct: 185 NASGVKHFVLDECDKMLEQLDMRRDVQEIFRITPHSKQVMMFSATLSKEIRVTCKKFMNN 244
Query: 247 PMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNK 306
P+EI++DDE+KLTLHGL QH+++L E +KNRKLNDLLD LDFNQVVIFVKSV RA EL+K
Sbjct: 245 PLEIFIDDESKLTLHGLQQHFLRLEETQKNRKLNDLLDTLDFNQVVIFVKSVGRAVELDK 304
Query: 307 LLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMP 366
LL EC FP I +HSG+SQEER++RYK FK KRILVATD+ GRGID+ERVNIVINYD P
Sbjct: 305 LLRECGFPCITVHSGLSQEERISRYKEFKNFEKRILVATDIFGRGIDVERVNIVINYDTP 364
Query: 367 DSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV-SKF 407
AD+YLHRVGRAGRFGTKGLA+TFVSS +D D+L ++ S+F
Sbjct: 365 ADADSYLHRVGRAGRFGTKGLALTFVSSQADLDVLEKIQSRF 406
>gi|358058468|dbj|GAA95431.1| hypothetical protein E5Q_02085 [Mixia osmundae IAM 14324]
Length = 429
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 273/405 (67%), Positives = 325/405 (80%), Gaps = 7/405 (1%)
Query: 10 EDELLDYEEED----AQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSG 65
+++L+DYEEE+ AP A + K YVGIHS+GFRDFLLKPELLRAI D G
Sbjct: 5 QEDLIDYEEEELPPVTTAPAGEMGAAESKDQKGSYVGIHSTGFRDFLLKPELLRAISDLG 64
Query: 66 FEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRE 125
FEHPSEVQ ECIPQAILGMDV+CQAKSGMGKTAVFV +TLQQ EP G+V +VLCHTRE
Sbjct: 65 FEHPSEVQQECIPQAILGMDVLCQAKSGMGKTAVFVTATLQQIEPVDGEVAVIVLCHTRE 124
Query: 126 LAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARD 183
LAYQI +E+ RFS Y+PD++ +VFYGG + K ++LK++ CP +VV TPGR+ AL RD
Sbjct: 125 LAYQIKNEYARFSKYMPDVRTSVFYGGTDPKKDAEVLKDKEKCPHVVVATPGRLNALVRD 184
Query: 184 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF 243
K L NV+HF+LDECDKMLE++DMRRDVQEIF+ TPH KQVMMFSATL+K+IR CKKF
Sbjct: 185 KVLKCGNVKHFVLDECDKMLEAVDMRRDVQEIFRATPHGKQVMMFSATLAKDIRVTCKKF 244
Query: 244 MQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAE 303
MQ P+EIYVDDE KLTLHGL QHY++L E KNRKLNDLLD+L+FNQV IFVKSV RA E
Sbjct: 245 MQSPLEIYVDDETKLTLHGLQQHYVRLEEAGKNRKLNDLLDSLEFNQVCIFVKSVPRATE 304
Query: 304 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 363
L++LL EC FPSICIHSG+ QEER+ +Y+ FK KRILVATD+ GRGID+ERVN+VINY
Sbjct: 305 LDRLLRECQFPSICIHSGLPQEERIKKYQQFKSFEKRILVATDIFGRGIDVERVNVVINY 364
Query: 364 DMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV-SKF 407
D P AD+YLHRV RAGRFG +GLAITFV+ D ++L + S+F
Sbjct: 365 DAPTEADSYLHRVARAGRFGGRGLAITFVTGEGDEEVLKAIQSRF 409
>gi|145247210|ref|XP_001395854.1| ATP-dependent RNA helicase sub2 [Aspergillus niger CBS 513.88]
gi|143586076|sp|A2R0B5.1|SUB2_ASPNC RecName: Full=ATP-dependent RNA helicase sub2
gi|134080586|emb|CAK41253.1| unnamed protein product [Aspergillus niger]
Length = 440
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 283/417 (67%), Positives = 337/417 (80%), Gaps = 19/417 (4%)
Query: 9 YEDELLDYEEEDAQAPDSVATK----ANGEAAK------------KG-YVGIHSSGFRDF 51
+E++L+DY +E+ Q D+ AT +NGEA K KG YVGIHS+GFRDF
Sbjct: 3 HEEDLIDYSDEELQTTDAAATTAAPASNGEAKKGDLTVSGGRPDKKGSYVGIHSTGFRDF 62
Query: 52 LLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPN 111
LLK ELLRAI D GFEHPSEVQ CIP AIL +DV+CQAKSG+GKTAVFVL+TL Q EP
Sbjct: 63 LLKEELLRAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTLHQLEPV 122
Query: 112 PGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQI 169
PG+ + LV+CHTRELAYQI +E+ RFS YLPD+K AVFYGG I+ +LL N+ P I
Sbjct: 123 PGECSILVMCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPIQKDVELLSNKESYPNI 182
Query: 170 VVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFS 229
VVGTPGR+ AL RDK LSL+NV+ F+LDECDKML+ +DMRRDVQEIF+ TP DKQVMMFS
Sbjct: 183 VVGTPGRLNALVRDKKLSLRNVKAFVLDECDKMLDQIDMRRDVQEIFRATPADKQVMMFS 242
Query: 230 ATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFN 289
ATLS+EIRPVCKKFM++P+E+YVDD+ KLTLHGL Q+YIKLSE EKNRKLN+LLD+L+FN
Sbjct: 243 ATLSQEIRPVCKKFMRNPLEVYVDDDTKLTLHGLQQYYIKLSEAEKNRKLNELLDSLEFN 302
Query: 290 QVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVG 349
QV+IFVKS RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD+ G
Sbjct: 303 QVIIFVKSTLRANELDKLLRECNFPSIAVHSGVSQEERIKRYKEFKEFNKRICVATDVFG 362
Query: 350 RGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
RGIDIER+N+ INYD+P AD+YLHRVGRAGRFGTKGL+I+FVS+ D +L + K
Sbjct: 363 RGIDIERINLAINYDLPADADSYLHRVGRAGRFGTKGLSISFVSTEDDEKVLKDIEK 419
>gi|302836427|ref|XP_002949774.1| hypothetical protein VOLCADRAFT_80795 [Volvox carteri f.
nagariensis]
gi|300265133|gb|EFJ49326.1| hypothetical protein VOLCADRAFT_80795 [Volvox carteri f.
nagariensis]
Length = 435
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 277/391 (70%), Positives = 316/391 (80%), Gaps = 15/391 (3%)
Query: 29 TKANGEAA--KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDV 86
+A G+A KKGYVGIH++GF++ +LKPELL+AI D GFEHPSEVQHECIP AILG DV
Sbjct: 21 AEAVGKAGQEKKGYVGIHATGFKELMLKPELLQAIADCGFEHPSEVQHECIPHAILGNDV 80
Query: 87 ICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKV 146
+CQAKSGMGKTAVFVLS LQQ +P P + A++LCHTRELA+QICHEF RFS + + +
Sbjct: 81 LCQAKSGMGKTAVFVLSILQQLDPKPNECHAIILCHTRELAFQICHEFTRFSARMKGVTI 140
Query: 147 AVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESL 206
FYGG+ + +K+ LK P IVVGTPGRI LA++ L LK+VR F+LDECDKMLE L
Sbjct: 141 GNFYGGIPVTQNKETLKKSVPNIVVGTPGRIKQLAKEGALPLKHVRFFVLDECDKMLEKL 200
Query: 207 DMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQH 266
DMR D QEIFKMTPH+KQVMMFSATL+ E+R VCKKFM +P E+YVDDE+KLTLHGLVQH
Sbjct: 201 DMRADCQEIFKMTPHEKQVMMFSATLNPEMRAVCKKFMTNPQEVYVDDESKLTLHGLVQH 260
Query: 267 YIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEE 326
Y+ L E EKNRKLNDLLDALDFNQVVIFVKSV+RA LN+LL ECNFPS+CI+ GM QEE
Sbjct: 261 YVMLHEEEKNRKLNDLLDALDFNQVVIFVKSVARAKMLNQLLNECNFPSVCIYGGMEQEE 320
Query: 327 RLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDS-------------ADTYL 373
R+ YK FKEG RILVATDLVGRGIDIERVNIVINYDMP+S ADTYL
Sbjct: 321 RIKVYKNFKEGKHRILVATDLVGRGIDIERVNIVINYDMPESDDKAKGESKHGNGADTYL 380
Query: 374 HRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
HRVGRAGRFGTKGLAITFVSS DS +LN V
Sbjct: 381 HRVGRAGRFGTKGLAITFVSSQEDSAVLNAV 411
>gi|389742315|gb|EIM83502.1| P-loop containing nucleoside triphosphate hydrolase protein
[Stereum hirsutum FP-91666 SS1]
Length = 435
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 277/417 (66%), Positives = 333/417 (79%), Gaps = 16/417 (3%)
Query: 4 TRDNEYEDELLDYEEEDAQAPDSV---------ATKANGEAA-KKGYVGIHSSGFRDFLL 53
+ DNE EL+DYE+E P+ T A+G+ KK + GIHS+GFRDFLL
Sbjct: 3 SHDNE---ELIDYEDEQDVVPNGAAAPASNGAAVTAADGDDKDKKNFSGIHSTGFRDFLL 59
Query: 54 KPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPG 113
KPELLRAI D GFEHPSEVQ ECIPQA+LGMDV+CQAKSG GKTAVFVL+TLQQ EP G
Sbjct: 60 KPELLRAISDLGFEHPSEVQQECIPQAVLGMDVLCQAKSGHGKTAVFVLATLQQLEPVNG 119
Query: 114 QVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL--KNECPQIVV 171
+V+ +VLCHTRELA+QI +E+ RF+ Y+PD++V F+GG + +LL K +CP IVV
Sbjct: 120 EVSVIVLCHTRELAFQIKNEYTRFAKYMPDVRVVTFFGGTPVSKDAELLRDKTKCPHIVV 179
Query: 172 GTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSAT 231
TPGR+ AL RDK + KNV+HF+LDECDKMLE LDMRRDVQ+IF+ TPH KQVMMFSAT
Sbjct: 180 ATPGRLNALVRDKVMDAKNVKHFVLDECDKMLEQLDMRRDVQDIFRSTPHHKQVMMFSAT 239
Query: 232 LSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQV 291
L+KEIR CKKFM +P+EI+VDDE KLTLHGL QH++KL E+ KNRKLN+LLD L+FNQV
Sbjct: 240 LAKEIRATCKKFMANPLEIFVDDETKLTLHGLQQHFVKLEEVGKNRKLNELLDTLEFNQV 299
Query: 292 VIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRG 351
VIFVKSV+RA EL+KLLV CNFPSI IHSG++QEER++RY+ FK KRILVATD+ GRG
Sbjct: 300 VIFVKSVARAIELDKLLVSCNFPSISIHSGLAQEERISRYQAFKAFEKRILVATDIFGRG 359
Query: 352 IDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV-SKF 407
ID+ERVNIV+NYD P AD+YLHRVGRAGRFGTKGLAITF SS +D ++ + S+F
Sbjct: 360 IDVERVNIVVNYDCPPDADSYLHRVGRAGRFGTKGLAITFQSSEADQQVMATIQSRF 416
>gi|389609001|dbj|BAM18112.1| helicase [Papilio xuthus]
Length = 425
Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust.
Identities = 282/397 (71%), Positives = 329/397 (82%), Gaps = 3/397 (0%)
Query: 11 DELLDYEEE---DAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFE 67
D+LLDYE+E D Q D A + K YV IHSSGFRDFLLKPE+LRAIVD GFE
Sbjct: 5 DDLLDYEDEEQADHQTADGATEAAPKKEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFE 64
Query: 68 HPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELA 127
HPSEVQHECIPQA+LGMD++CQAKSGMGKTAVFVL+TLQQ EP+ V LV+CHTRELA
Sbjct: 65 HPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSENHVYVLVMCHTRELA 124
Query: 128 YQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLS 187
+QI E+ERFS Y+ ++V+VF+GG+ I+ +++LK CP IVVGTPGRILAL K L+
Sbjct: 125 FQISKEYERFSKYMAGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILALVNSKKLN 184
Query: 188 LKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDP 247
LK+++HFILDECDKMLESLDMRRDVQEIF+ TPH KQVMMFSATLSKEIRPVCKKFMQDP
Sbjct: 185 LKHLKHFILDECDKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKKFMQDP 244
Query: 248 MEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKL 307
ME+YVDDEAKLTLHGL QHY+KL E EKN+KL +LLD L+FNQVVIFVKSV R L +L
Sbjct: 245 MEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCIALGQL 304
Query: 308 LVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPD 367
L + NFP+I IH M+Q+ERL+RY+ FK+ KRILVAT+L GRG+DIERVNIV NYDMP+
Sbjct: 305 LTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPE 364
Query: 368 SADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
+DTYLHRV RAGRFGTKGLAIT VS +D+ ILN+V
Sbjct: 365 DSDTYLHRVARAGRFGTKGLAITMVSDENDAKILNEV 401
>gi|449550559|gb|EMD41523.1| hypothetical protein CERSUDRAFT_110074 [Ceriporiopsis subvermispora
B]
Length = 440
Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust.
Identities = 281/420 (66%), Positives = 331/420 (78%), Gaps = 21/420 (5%)
Query: 6 DNEYEDELLDYEEED------AQAPDSVATKANG---------EAAKKGYVGIHSSGFRD 50
DNE EL+DYE+E A AP + + KK + GIHS+GFRD
Sbjct: 5 DNE---ELIDYEDEHDVVANGAPAPAATNGAVAAAAPAADGEADKDKKNFSGIHSTGFRD 61
Query: 51 FLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEP 110
FLLKPELLRAI D GFEHPSEVQ ECIPQA+LGMDV+CQAKSG GKTAVFVL+TLQQ EP
Sbjct: 62 FLLKPELLRAISDLGFEHPSEVQQECIPQAVLGMDVLCQAKSGHGKTAVFVLATLQQLEP 121
Query: 111 NPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL--KNECPQ 168
G+V+ LV+CHTRELA+QI +E+ RF+ Y+PD++V+ FYGG + +LL K++CP
Sbjct: 122 VNGEVSVLVMCHTRELAFQIKNEYSRFAKYMPDVRVSTFYGGTPVAKDAELLRDKSKCPH 181
Query: 169 IVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMF 228
IVV TPGR+ AL RDK L V+HFILDECDKMLE LDMRRDVQEIF+ TPH KQVMMF
Sbjct: 182 IVVATPGRLNALVRDKVLDASKVKHFILDECDKMLEQLDMRRDVQEIFRATPHHKQVMMF 241
Query: 229 SATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDF 288
SATL+KEIR CKKFM +P+EI+VDDE KLTLHGL QHY+KL E++KNRKLN+LLD L+F
Sbjct: 242 SATLAKEIRVTCKKFMANPLEIFVDDETKLTLHGLQQHYVKLEEVQKNRKLNELLDTLEF 301
Query: 289 NQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLV 348
NQVVIFVKSV+RA EL+KLLV CNFPSI IHSG++QEER+ RY FK KRILVATD+
Sbjct: 302 NQVVIFVKSVARAIELDKLLVSCNFPSISIHSGLAQEERINRYTAFKAFEKRILVATDIF 361
Query: 349 GRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV-SKF 407
GRGID+ERVNIVINYD P AD+YLHRVGRAGRFGTKGLAITFVSS +D +++ + S+F
Sbjct: 362 GRGIDVERVNIVINYDCPPDADSYLHRVGRAGRFGTKGLAITFVSSETDQQVMSAIQSRF 421
>gi|345562936|gb|EGX45944.1| hypothetical protein AOL_s00112g133 [Arthrobotrys oligospora ATCC
24927]
Length = 443
Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust.
Identities = 276/418 (66%), Positives = 336/418 (80%), Gaps = 20/418 (4%)
Query: 7 NEYEDELLDYEEED----AQAP-DSVATKANGEAAK------------KG-YVGIHSSGF 48
+E+E++L+DY +++ A AP ++ NGEA K KG YVGIHS+GF
Sbjct: 2 SEHEEDLIDYSDDEIGNEANAPTEATGVTGNGEAQKNETTTSNQADNKKGSYVGIHSTGF 61
Query: 49 RDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQT 108
RDFLLKPELLRAIVD GFEHPSEVQ CIPQAILG DV+CQAKSG+GKTAVFVL+TLQQ
Sbjct: 62 RDFLLKPELLRAIVDCGFEHPSEVQQVCIPQAILGTDVLCQAKSGLGKTAVFVLTTLQQL 121
Query: 109 EPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--C 166
+P G+ LV+CHTRELAYQI +E+ RFS Y+P++K +VFYGG ++ ++LKN+
Sbjct: 122 DPVAGETAVLVMCHTRELAYQIRNEYTRFSKYMPEVKCSVFYGGTPMQKDIEVLKNKDTH 181
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
P I+V TPGR+ AL RDK L L +V+ F+LDECDKML+ +DMRRDVQEIF+ TP KQVM
Sbjct: 182 PHIIVATPGRLNALVRDKHLRLGSVKAFVLDECDKMLDQIDMRRDVQEIFRATPQSKQVM 241
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
MFSATLS++IRP+CKKFMQ P+EI+VDDE KLTLHGL Q+YIKL E EKNRKLNDLLD L
Sbjct: 242 MFSATLSQDIRPICKKFMQSPLEIFVDDETKLTLHGLQQYYIKLDEKEKNRKLNDLLDQL 301
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
+FNQV+IFVKS RA ELNKLLVECNFPSI +HSG+SQEER+ RY FKE NKRI VATD
Sbjct: 302 EFNQVIIFVKSTVRANELNKLLVECNFPSIAVHSGISQEERIKRYTSFKEFNKRICVATD 361
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
+ GRGIDIER+N+ INYD+P D+YLHRVGRAGRFGTKGL+I+FVSS D+++L+++
Sbjct: 362 VFGRGIDIERINLAINYDLPADPDSYLHRVGRAGRFGTKGLSISFVSSKEDAEVLDKI 419
>gi|378730355|gb|EHY56814.1| ATP-dependent RNA helicase sub2 [Exophiala dermatitidis NIH/UT8656]
Length = 441
Score = 570 bits (1468), Expect = e-160, Method: Compositional matrix adjust.
Identities = 274/416 (65%), Positives = 336/416 (80%), Gaps = 19/416 (4%)
Query: 10 EDELLDYEEEDAQAPDSVA--------------TKANGEAAKKG---YVGIHSSGFRDFL 52
E++L+DY +E+ QA ++ A T G+AA KG YVGIHS+GFRDFL
Sbjct: 4 EEDLIDYSDEELQATETPAAAGATNGAAKKGDLTVTGGKAADKGKGSYVGIHSTGFRDFL 63
Query: 53 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNP 112
LK ELLRAI D GFEHPSEVQ +CIPQA+L +D++CQAKSG+GKTAVFVL+TL Q EP P
Sbjct: 64 LKGELLRAITDCGFEHPSEVQQKCIPQALLSVDILCQAKSGLGKTAVFVLTTLHQLEPVP 123
Query: 113 GQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIV 170
G+ + LV+CHTRELAYQI +E+ RFS YLPD+K AVFYGG I+ +LLKN+ P I+
Sbjct: 124 GECSVLVMCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPIQKDIELLKNKETFPNII 183
Query: 171 VGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSA 230
VGTPGR+ AL RDK LSL+NV+ F+LDECDKML+ +DMRRDVQEIF+ TP +KQVMMFSA
Sbjct: 184 VGTPGRLNALVRDKVLSLRNVKAFVLDECDKMLDQIDMRRDVQEIFRATPTEKQVMMFSA 243
Query: 231 TLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQ 290
TL EIRP+C+KFM++P+E++VDDE KLTLHGL Q+ I+LSE EKNRKLN+LLD+L+FNQ
Sbjct: 244 TLPTEIRPICRKFMRNPLEVFVDDETKLTLHGLQQYSIRLSESEKNRKLNELLDSLEFNQ 303
Query: 291 VVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGR 350
V+IFVKS RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD+ GR
Sbjct: 304 VIIFVKSTLRATELDKLLRECNFPSIAVHSGISQEERIKRYKEFKEFNKRICVATDVFGR 363
Query: 351 GIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
GIDIER+N+ INYD+P AD+YLHRVGRAGRFGTKGL+I+FVSS D +L ++ +
Sbjct: 364 GIDIERINLAINYDLPADADSYLHRVGRAGRFGTKGLSISFVSSEQDEQVLKEIER 419
>gi|358371078|dbj|GAA87687.1| ATP dependent RNA helicase [Aspergillus kawachii IFO 4308]
Length = 440
Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust.
Identities = 282/417 (67%), Positives = 337/417 (80%), Gaps = 19/417 (4%)
Query: 9 YEDELLDYEEEDAQAPDSVATK----ANGEAAK------------KG-YVGIHSSGFRDF 51
+E++L+DY +E+ Q D+ AT +NGEA K KG YVGIHS+GFRDF
Sbjct: 3 HEEDLIDYSDEELQTTDAAATTAAPASNGEAKKGDLTVSGGRPDKKGSYVGIHSTGFRDF 62
Query: 52 LLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPN 111
LLK ELLRAI D GFEHPSEVQ CIP AIL +DV+CQAKSG+GKTAVFVL+TL Q EP
Sbjct: 63 LLKEELLRAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTLHQLEPV 122
Query: 112 PGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQI 169
PG+ + LV+CHTRELAYQI +E+ RFS YLPD+K AVFYGG I+ +LL N+ P I
Sbjct: 123 PGECSILVMCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPIQKDVELLSNKESYPNI 182
Query: 170 VVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFS 229
VVGTPGR+ AL RDK LSL+NV+ F+LDECDKML+ +DMRRDVQEIF+ TP DKQVMMFS
Sbjct: 183 VVGTPGRLNALVRDKKLSLRNVKAFVLDECDKMLDQIDMRRDVQEIFRATPADKQVMMFS 242
Query: 230 ATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFN 289
ATLS++IRPVCKKFM++P+E+YVDD+ KLTLHGL Q+YIKLSE EKNRKLN+LLD+L+FN
Sbjct: 243 ATLSQDIRPVCKKFMRNPLEVYVDDDTKLTLHGLQQYYIKLSEAEKNRKLNELLDSLEFN 302
Query: 290 QVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVG 349
QV+IFVKS RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD+ G
Sbjct: 303 QVIIFVKSTLRANELDKLLRECNFPSIAVHSGVSQEERIKRYKEFKEFNKRICVATDVFG 362
Query: 350 RGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
RGIDIER+N+ INYD+P AD+YLHRVGRAGRFGTKGL+I+FVS+ D +L + K
Sbjct: 363 RGIDIERINLAINYDLPADADSYLHRVGRAGRFGTKGLSISFVSTEDDEKVLKDIEK 419
>gi|160358722|sp|A6R603.2|SUB2_AJECN RecName: Full=ATP-dependent RNA helicase SUB2
Length = 442
Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust.
Identities = 276/419 (65%), Positives = 335/419 (79%), Gaps = 21/419 (5%)
Query: 9 YEDELLDYEEEDAQA------------------PDSVATKANGEAAKKG-YVGIHSSGFR 49
+E++L+DY +E+ QA + T + A KKG YVGIHS+GFR
Sbjct: 3 HEEDLIDYSDEELQATDAAAGTAAAGANGAAPKKEGDLTVSGARADKKGSYVGIHSTGFR 62
Query: 50 DFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTE 109
DFLLK ELLRAI D GFEHPSEVQ CIP AIL +DV+CQAKSG+GKTAVFVL+TL Q E
Sbjct: 63 DFLLKGELLRAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTLHQLE 122
Query: 110 PNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL--KNECP 167
P PG+ + LV+CHTRELAYQI +E+ RFS YLPD+K AVFYGG ++ +LL K+ P
Sbjct: 123 PVPGECSILVMCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPMQKDIELLSSKDTYP 182
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
IVVGTPGR+ AL RDK LSL+N++ F+LDECDKML+ +DMRRDVQEIF+ TP DKQVMM
Sbjct: 183 SIVVGTPGRLNALVRDKKLSLRNIKAFVLDECDKMLDQIDMRRDVQEIFRATPADKQVMM 242
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSATLS+E+RP+CKKFM++P+E+YVDD+ KLTLHGL+Q+YIKL E EKNRKLN+LLD+L+
Sbjct: 243 FSATLSQEVRPICKKFMRNPLEVYVDDDTKLTLHGLLQYYIKLGESEKNRKLNELLDSLE 302
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
FNQV+IFVKS RA+EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD+
Sbjct: 303 FNQVIIFVKSTQRASELDKLLRECNFPSIAVHSGVSQEERIKRYKEFKEFNKRICVATDV 362
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
GRGIDIER+N+ INYD+P AD+YLHRVGRAGRFGTKGLAI+FVSS D ++L + K
Sbjct: 363 FGRGIDIERINLAINYDLPADADSYLHRVGRAGRFGTKGLAISFVSSEQDQEVLKDIEK 421
>gi|357631512|gb|EHJ78982.1| hypothetical protein KGM_15394 [Danaus plexippus]
Length = 425
Score = 569 bits (1466), Expect = e-160, Method: Compositional matrix adjust.
Identities = 282/397 (71%), Positives = 330/397 (83%), Gaps = 3/397 (0%)
Query: 11 DELLDYEEE---DAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFE 67
D+LLDYE+E D Q D A + K YV IHSSGFRDFLLKPE+LRAIVD GFE
Sbjct: 5 DDLLDYEDEEQADQQNVDGATEAAPKKEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFE 64
Query: 68 HPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELA 127
HPSEVQHECIPQA+LGMD++CQAKSGMGKTAVFVL+TLQQ EP+ V LV+CHTRELA
Sbjct: 65 HPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSDNHVYVLVMCHTRELA 124
Query: 128 YQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLS 187
+QI E+ERFS Y+ ++V+VF+GG+ I+ +D+LK CP IVVGTPGRILAL +K L+
Sbjct: 125 FQISKEYERFSKYMAGVRVSVFFGGMPIQKDEDVLKTACPHIVVGTPGRILALVNNKKLN 184
Query: 188 LKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDP 247
LK+++HFILDECDKMLESLDMRRDVQEIF+ TPH KQVMMFSATLSK+IRPVCKKFMQDP
Sbjct: 185 LKHLKHFILDECDKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKDIRPVCKKFMQDP 244
Query: 248 MEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKL 307
ME+YVDDEAKLTLHGL QHY+KL E EKN+KL +LLD L+FNQVVIFVKSV R L +L
Sbjct: 245 MEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCIALAQL 304
Query: 308 LVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPD 367
L + NFP+I IH M+Q+ERL+RY+ FK+ KRILVAT+L GRG+DIERVNIV NYDMP+
Sbjct: 305 LTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPE 364
Query: 368 SADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
+DTYLHRV RAGRFGTKGLAIT VS +D+ ILN+V
Sbjct: 365 DSDTYLHRVARAGRFGTKGLAITMVSDENDAKILNEV 401
>gi|294658297|ref|XP_460627.2| DEHA2F06138p [Debaryomyces hansenii CBS767]
gi|91208173|sp|Q6BME5.2|SUB2_DEBHA RecName: Full=ATP-dependent RNA helicase SUB2
gi|202953024|emb|CAG88955.2| DEHA2F06138p [Debaryomyces hansenii CBS767]
Length = 435
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 274/420 (65%), Positives = 335/420 (79%), Gaps = 11/420 (2%)
Query: 7 NEYEDELLDYEE-EDAQAPDSVATKA-------NGEAAKKG-YVGIHSSGFRDFLLKPEL 57
+E ++ELLDY + E+ P + A A + EA KKG YVGIH++GFRDFLLKPEL
Sbjct: 3 HEGQEELLDYSDSEEIAVPTTTAPSAAAGEGANDKEADKKGSYVGIHATGFRDFLLKPEL 62
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA 117
LRAI D GFEHPSEVQ CIPQ+ILG DV+CQAKSG+GKTAVFVLSTLQQ +P PG+++
Sbjct: 63 LRAIGDCGFEHPSEVQQVCIPQSILGTDVLCQAKSGLGKTAVFVLSTLQQLDPVPGEIST 122
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPG 175
LV+CHTRELAYQI +E+ RFS Y+PD+K VFYGG I + LKN+ CP IVV TPG
Sbjct: 123 LVICHTRELAYQIRNEYARFSKYMPDVKTEVFYGGTPITRDLEKLKNKDTCPHIVVATPG 182
Query: 176 RILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKE 235
R+ AL +K + L N++ F++DECDK+LE++DMRRDVQ+IF+ TPH KQVMMFSATLS+E
Sbjct: 183 RLHALVTEKSIRLNNIKSFVIDECDKVLEAVDMRRDVQDIFRNTPHQKQVMMFSATLSQE 242
Query: 236 IRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFV 295
IRPVCKKFMQ+P+EIYVDDEAKLTLHGL Q+YIKL E EKNRKL+DLLD+L+FNQV+IFV
Sbjct: 243 IRPVCKKFMQNPLEIYVDDEAKLTLHGLQQYYIKLDEKEKNRKLSDLLDSLEFNQVIIFV 302
Query: 296 KSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIE 355
+S RA ELNKLL NFPSI +HSG+ QEER+ RYK FKE NKRI V+TD+ GRGIDIE
Sbjct: 303 RSTQRANELNKLLCSSNFPSIAVHSGLPQEERIERYKSFKEFNKRICVSTDVFGRGIDIE 362
Query: 356 RVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKFMFLLIGSF 415
R+N+ INYD+P+ AD YLHRVGRAGRFGTKGLA++ VS+ D ++L ++ + I F
Sbjct: 363 RINLAINYDLPNEADQYLHRVGRAGRFGTKGLAVSLVSTKDDEEVLEKIQSRFDVKITEF 422
>gi|193652521|ref|XP_001942765.1| PREDICTED: ATP-dependent RNA helicase WM6-like [Acyrthosiphon
pisum]
Length = 423
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 279/404 (69%), Positives = 324/404 (80%), Gaps = 1/404 (0%)
Query: 11 DELLDYEE-EDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHP 69
D+LLDYEE E + +S K + K YV IHSSGFRDFLLKPE+LRAIVD GFEHP
Sbjct: 5 DDLLDYEEDEQNETVESDDKKQAKKEVKGNYVSIHSSGFRDFLLKPEILRAIVDCGFEHP 64
Query: 70 SEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQ 129
SEVQHECIPQA+LGMD++CQAKSGMGKTAVFVLSTLQQ E +V ALVLCHTRELA+Q
Sbjct: 65 SEVQHECIPQAMLGMDILCQAKSGMGKTAVFVLSTLQQLEVYESEVYALVLCHTRELAFQ 124
Query: 130 ICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLK 189
I EFERF+ YLP +KV+VF+GGV I +D LKN P +VVGTPGRIL L R K L L
Sbjct: 125 ISKEFERFTKYLPAVKVSVFFGGVPITKDEDTLKNNKPHVVVGTPGRILELIRKKKLVLN 184
Query: 190 NVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPME 249
N++HFILDECDKMLE L MR DVQEIFK TP +KQVMMFSATLSK+IRPVCKKFMQ P+E
Sbjct: 185 NLKHFILDECDKMLEILHMRSDVQEIFKNTPFNKQVMMFSATLSKDIRPVCKKFMQQPLE 244
Query: 250 IYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLV 309
+YVDD+AKL+LHGL Q+Y+KL+E EKN+KL DLLD L+FNQV+IFVKSV R L +LL
Sbjct: 245 VYVDDDAKLSLHGLQQYYVKLTEKEKNKKLFDLLDELEFNQVIIFVKSVQRCVVLTELLN 304
Query: 310 ECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSA 369
E NFPS+ +H GMSQ++RL Y+ FK+ KRILVAT+L GRG+DIERVNIVINYDMP+
Sbjct: 305 EQNFPSVAMHGGMSQQDRLKFYQEFKDFQKRILVATNLFGRGMDIERVNIVINYDMPEDT 364
Query: 370 DTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKFMFLLIG 413
DTYLHRV RAGRFGTKGLAITF+ +D+ +LN V + IG
Sbjct: 365 DTYLHRVARAGRFGTKGLAITFICEETDAKVLNSVQDRFDVTIG 408
>gi|367021668|ref|XP_003660119.1| hypothetical protein MYCTH_2298018 [Myceliophthora thermophila ATCC
42464]
gi|347007386|gb|AEO54874.1| hypothetical protein MYCTH_2298018 [Myceliophthora thermophila ATCC
42464]
Length = 434
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 277/418 (66%), Positives = 331/418 (79%), Gaps = 12/418 (2%)
Query: 10 EDELLDYEEED----AQAPDSVATKANGEAA-----KKG-YVGIHSSGFRDFLLKPELLR 59
E++L+DY +++ AP S K + AA KKG YVGIHS+GFRDFLLKPELLR
Sbjct: 4 EEDLIDYSDDELNNETAAPTSNGKKGDAAAATQNVDKKGSYVGIHSTGFRDFLLKPELLR 63
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
AI D GFEHPSEVQ CIPQA+LG D+ICQAKSG+GKTAVFVL+TLQQ EP G+ + LV
Sbjct: 64 AIADCGFEHPSEVQQTCIPQAMLGGDIICQAKSGLGKTAVFVLTTLQQVEPVAGECSVLV 123
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRI 177
+CHTRELA+QI +E+ RFS Y+PDIK VFYGG I+ +++LKN+ P I+VGTPGR+
Sbjct: 124 MCHTRELAFQIRNEYNRFSKYMPDIKTGVFYGGTPIQKDEEILKNKETHPHIIVGTPGRL 183
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
AL RDK L L NVR F+LDECDKML+ +DMRRDVQEIF+ TP KQVMMFSATLS EI+
Sbjct: 184 NALVRDKHLRLGNVRMFVLDECDKMLDQIDMRRDVQEIFRATPQQKQVMMFSATLSDEIK 243
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 297
P+C+KFMQ+P E YVD++ KLTLHGL Q+Y+ L E EKNRKLN+LLD L FNQV+IFVKS
Sbjct: 244 PICRKFMQNPTEHYVDEDTKLTLHGLQQYYVALQEREKNRKLNELLDDLQFNQVIIFVKS 303
Query: 298 VSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERV 357
RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD+ GRGIDIER+
Sbjct: 304 TLRATELDKLLRECNFPSIAVHSGISQEERIRRYKEFKEFNKRICVATDVFGRGIDIERI 363
Query: 358 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKFMFLLIGSF 415
N+ INYDMP AD+YLHRVGRAGRFGTKGLAI+FVSS D ++L Q+ K + + F
Sbjct: 364 NLAINYDMPADADSYLHRVGRAGRFGTKGLAISFVSSDQDKEVLQQIEKRFEVALPEF 421
>gi|296413310|ref|XP_002836357.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295630174|emb|CAZ80548.1| unnamed protein product [Tuber melanosporum]
Length = 443
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 272/416 (65%), Positives = 334/416 (80%), Gaps = 21/416 (5%)
Query: 10 EDELLDYEEEDA--QAPDSVATKANGEAA----------------KKG-YVGIHSSGFRD 50
E++L+DY +++ ++ + ANGEAA KKG YVGIHS+GFRD
Sbjct: 4 EEDLIDYSDDEGLDATKETPSVAANGEAAAKKADVTAAAGGPAADKKGSYVGIHSTGFRD 63
Query: 51 FLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEP 110
FLLKPELLRAIVD GFEHPSEVQ CIPQ+ILG DV+CQAKSG+GKTAVFVL+TLQQ +P
Sbjct: 64 FLLKPELLRAIVDCGFEHPSEVQQVCIPQSILGTDVLCQAKSGLGKTAVFVLTTLQQVDP 123
Query: 111 NPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKN--ECPQ 168
PG+ + LV+CHTRELAYQI +E+ RFS Y+P+++ AVFYGG ++ +LKN + P
Sbjct: 124 VPGEASVLVMCHTRELAYQIKNEYARFSKYMPEVRTAVFYGGTPMQNDVQVLKNKDQHPH 183
Query: 169 IVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMF 228
I+V TPGR+ AL RDK L L +V+ F+LDECDKMLE +DMRRDVQEIF+ TP KQVMMF
Sbjct: 184 IIVATPGRLNALVRDKHLRLGSVKVFVLDECDKMLEQIDMRRDVQEIFRATPQQKQVMMF 243
Query: 229 SATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDF 288
SATLS+EIRP+CKKFMQ P+EIYVDDE KLTLHGL Q+Y+KL E EKNRKLN+LLD L+F
Sbjct: 244 SATLSQEIRPICKKFMQSPLEIYVDDETKLTLHGLQQYYVKLEEKEKNRKLNELLDQLEF 303
Query: 289 NQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLV 348
NQV+IFVKS RA EL++LL ECNFPSI +HSG++QEER+ RYK FKE NKRI VATD+
Sbjct: 304 NQVIIFVKSTIRATELSRLLNECNFPSIAVHSGIAQEERIARYKQFKEFNKRICVATDVF 363
Query: 349 GRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
GRGIDIER+N+ INYD+P D+YLHRVGRAGRFGTKGL+I+FVSS D+++L+++
Sbjct: 364 GRGIDIERINLAINYDLPADPDSYLHRVGRAGRFGTKGLSISFVSSKEDAEVLDKI 419
>gi|307178480|gb|EFN67169.1| Spliceosome RNA helicase Bat1 [Camponotus floridanus]
Length = 425
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 287/399 (71%), Positives = 330/399 (82%), Gaps = 3/399 (0%)
Query: 11 DELLDYEEEDA--QAPD-SVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFE 67
D+LLDYE+E+ Q D S A + K YV IHSSGFRDFLLKPE+LRAIVD GFE
Sbjct: 5 DDLLDYEDEEQTEQVVDGSGDVPAKNKEVKGTYVSIHSSGFRDFLLKPEILRAIVDCGFE 64
Query: 68 HPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELA 127
HPSEVQHECIPQA+LGMD++CQAKSGMGKTAVFVL+TLQQ E QV LV+CHTRELA
Sbjct: 65 HPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLELTENQVYVLVMCHTRELA 124
Query: 128 YQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLS 187
+QI E+ERFS Y+P +KV VF+GG+ I+ +++LK CP IVVGTPGRILAL R K L+
Sbjct: 125 FQISKEYERFSKYMPHVKVGVFFGGLPIQKDEEVLKTVCPHIVVGTPGRILALVRTKKLN 184
Query: 188 LKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDP 247
LK+++HFILDECDKMLE LDMRRDVQEIF+ TPH KQVMMFSATLSKEIRPVCKKFMQDP
Sbjct: 185 LKHLKHFILDECDKMLELLDMRRDVQEIFRSTPHSKQVMMFSATLSKEIRPVCKKFMQDP 244
Query: 248 MEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKL 307
ME+YVDDEAKLTL+GL QHY+KL E EKN+KL +LLD L+FNQVVIFVKSV R L +L
Sbjct: 245 MEVYVDDEAKLTLNGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCMALAQL 304
Query: 308 LVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPD 367
L E NFP+I IH GM+QEERL+RY+ FK+ KRILVAT+L GRG+DIERVNIV NYDMP+
Sbjct: 305 LTEQNFPAIGIHRGMTQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPE 364
Query: 368 SADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
+DTYLHRV RAGRFGTKGLAIT VS SD+ ILN V +
Sbjct: 365 DSDTYLHRVARAGRFGTKGLAITLVSDESDAKILNDVQE 403
>gi|121704012|ref|XP_001270270.1| ATP dependent RNA helicase (Sub2), putative [Aspergillus clavatus
NRRL 1]
gi|143586067|sp|A1CMQ7.1|SUB2_ASPCL RecName: Full=ATP-dependent RNA helicase sub2
gi|119398414|gb|EAW08844.1| ATP dependent RNA helicase (Sub2), putative [Aspergillus clavatus
NRRL 1]
Length = 441
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 277/418 (66%), Positives = 333/418 (79%), Gaps = 20/418 (4%)
Query: 9 YEDELLDYEEED-----------------AQAPDSVATKANGEAAKKG-YVGIHSSGFRD 50
+E++L+DY +E+ AQ T + G KKG YVGIHS+GFRD
Sbjct: 3 HEEDLIDYSDEELQTTDAAATTAAPAANGAQDKKGDLTVSGGRPDKKGSYVGIHSTGFRD 62
Query: 51 FLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEP 110
FLLK ELLRAI D GFEHPSEVQ CIP AIL +DV+CQAKSG+GKTAVFVL+TL Q EP
Sbjct: 63 FLLKGELLRAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTLHQLEP 122
Query: 111 NPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQ 168
PG+ + LV+CHTRELAYQI +E+ RFS YLPD+K AVFYGG I+ ++L N+ P
Sbjct: 123 VPGECSVLVMCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPIQKDVEVLSNKESYPN 182
Query: 169 IVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMF 228
IVVGTPGR+ AL RDK LSL+NV+ F+LDECDKML+ +DMRRDVQEIF+ TP DKQVMMF
Sbjct: 183 IVVGTPGRLNALVRDKKLSLRNVKAFVLDECDKMLDQIDMRRDVQEIFRATPADKQVMMF 242
Query: 229 SATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDF 288
SATLS+EIRP+CKKFM++P+E+YVDD+ KLTLHGL Q+YIKLSE EKNRKLN+LLD+L+F
Sbjct: 243 SATLSQEIRPICKKFMRNPLEVYVDDDTKLTLHGLQQYYIKLSESEKNRKLNELLDSLEF 302
Query: 289 NQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLV 348
NQV+IFVKS RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD+
Sbjct: 303 NQVIIFVKSTLRANELDKLLRECNFPSIAVHSGVSQEERIKRYKEFKEFNKRICVATDVF 362
Query: 349 GRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
GRGIDIER+N+ INYD+P AD+YLHRVGRAGRFGTKGL+I+FVS+ D +L ++ K
Sbjct: 363 GRGIDIERINLAINYDLPADADSYLHRVGRAGRFGTKGLSISFVSNEDDEKVLKEIEK 420
>gi|119467294|ref|XP_001257453.1| ATP dependent RNA helicase (Sub2), putative [Neosartorya fischeri
NRRL 181]
gi|143586096|sp|A1DL85.1|SUB2_NEOFI RecName: Full=ATP-dependent RNA helicase sub2
gi|119405605|gb|EAW15556.1| ATP dependent RNA helicase (Sub2), putative [Neosartorya fischeri
NRRL 181]
Length = 441
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 277/418 (66%), Positives = 333/418 (79%), Gaps = 20/418 (4%)
Query: 9 YEDELLDYEEED-----------------AQAPDSVATKANGEAAKKG-YVGIHSSGFRD 50
+E++L+DY +E+ AQ T + G KKG YVGIHS+GFRD
Sbjct: 3 HEEDLIDYSDEELQTTDAAATTAAPAANGAQDKKGDLTVSGGRPDKKGSYVGIHSTGFRD 62
Query: 51 FLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEP 110
FLLK ELLRAI D GFEHPSEVQ CIP AIL +DV+CQAKSG+GKTAVFVL+TL Q EP
Sbjct: 63 FLLKGELLRAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTLHQLEP 122
Query: 111 NPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQ 168
PG+ + LV+CHTRELAYQI +E+ RFS YLPD+K AVFYGG I+ ++L N+ P
Sbjct: 123 VPGECSVLVMCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPIQKDIEVLSNKESYPN 182
Query: 169 IVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMF 228
IVVGTPGR+ AL R+K LSL+NV+ F+LDECDKML+ +DMRRDVQEIF+ TP DKQVMMF
Sbjct: 183 IVVGTPGRLNALVREKKLSLRNVKAFVLDECDKMLDQIDMRRDVQEIFRATPADKQVMMF 242
Query: 229 SATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDF 288
SATLS+EIRP+CKKFM++P+E+YVDD+ KLTLHGL Q+YIKLSE EKNRKLN+LLD+L+F
Sbjct: 243 SATLSQEIRPICKKFMRNPLEVYVDDDTKLTLHGLQQYYIKLSESEKNRKLNELLDSLEF 302
Query: 289 NQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLV 348
NQV+IFVKS RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD+
Sbjct: 303 NQVIIFVKSTLRANELDKLLRECNFPSIAVHSGVSQEERIKRYKEFKEFNKRICVATDVF 362
Query: 349 GRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
GRGIDIER+N+ INYD+P AD+YLHRVGRAGRFGTKGL+I+FVSS D +L ++ K
Sbjct: 363 GRGIDIERINLAINYDLPADADSYLHRVGRAGRFGTKGLSISFVSSEEDEKVLKEIEK 420
>gi|393218766|gb|EJD04254.1| ATP-dependent RNA helicase SUB2 [Fomitiporia mediterranea MF3/22]
Length = 433
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 274/407 (67%), Positives = 330/407 (81%), Gaps = 17/407 (4%)
Query: 11 DELLDYEEEDAQAPDSVATKA-----------NGEAAKKGYVGIHSSGFRDFLLKPELLR 59
+EL+DYE+E D +A A + KK + GIHS+GFRDFLLKPELLR
Sbjct: 8 EELIDYEDEQ----DVIANGAAAVSNGAAAGDGDDKEKKNFSGIHSTGFRDFLLKPELLR 63
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
AI D GFEHPSEVQ ECIPQA+LGMDV+CQAKSG GKTAVFVL+TLQQ EP G+V+ LV
Sbjct: 64 AISDLGFEHPSEVQQECIPQAVLGMDVLCQAKSGHGKTAVFVLATLQQLEPVNGEVSVLV 123
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRI 177
LCHTRELA+QI +E+ RF+ Y+PD+++A FYGG ++ ++LK++ CP IVV TPGR+
Sbjct: 124 LCHTRELAFQIRNEYNRFAKYMPDVRIATFYGGTPVQKDAEILKDKSKCPHIVVATPGRL 183
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
ALARDK L +V+HF+LDECDKMLE LDMRRDVQEIF++TPH KQVMMFSATL+K+IR
Sbjct: 184 NALARDKILLPTHVKHFVLDECDKMLEQLDMRRDVQEIFRVTPHHKQVMMFSATLAKDIR 243
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 297
CKKFM +P+EI+VDDE KLTLHGL QHY+KL E +KNRKLN+LLD+L+FNQVVIFVKS
Sbjct: 244 VTCKKFMANPLEIFVDDETKLTLHGLQQHYVKLEEAQKNRKLNELLDSLEFNQVVIFVKS 303
Query: 298 VSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERV 357
V+RA EL+KLL CNFPSI IHSG++QEER+ RY FK KRILVATD+ GRGID+ERV
Sbjct: 304 VARAIELDKLLQSCNFPSISIHSGLAQEERINRYTAFKAFEKRILVATDIFGRGIDVERV 363
Query: 358 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
NIVINYD P AD+YLHRVGRAGRFGTKGLAITFV+S +D +++Q+
Sbjct: 364 NIVINYDCPPDADSYLHRVGRAGRFGTKGLAITFVASEADQTVMSQI 410
>gi|346468339|gb|AEO34014.1| hypothetical protein [Amblyomma maculatum]
Length = 421
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 271/366 (74%), Positives = 317/366 (86%)
Query: 39 GYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTA 98
GYV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAILGMD++CQAKSGMGKTA
Sbjct: 32 GYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTA 91
Query: 99 VFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIH 158
VFVL+TLQQ +P GQV+ LV+CHTRELA+QI E+ERFS YLP ++V VF+GG+NI
Sbjct: 92 VFVLATLQQLDPVEGQVSVLVMCHTRELAFQISKEYERFSKYLPSVRVGVFFGGMNITND 151
Query: 159 KDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKM 218
+ +L++ CP +VVGTPGR+LAL R + L LK+++HF+LDECDKMLE LDMRRDVQEIF+
Sbjct: 152 EKVLRSSCPHVVVGTPGRVLALVRSRKLQLKHIKHFVLDECDKMLEQLDMRRDVQEIFRS 211
Query: 219 TPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRK 278
TPH+KQVMMFSATLSKEIRPVC KFMQDPME+YVDDEAKLTLHGL Q+Y+KL + EKNRK
Sbjct: 212 TPHEKQVMMFSATLSKEIRPVCLKFMQDPMEVYVDDEAKLTLHGLQQYYVKLKDNEKNRK 271
Query: 279 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGN 338
L +LLD L+FNQVVIFVK+V R L +LLVE NFP+I IH M+QEERL+RY+ FK+
Sbjct: 272 LFELLDLLEFNQVVIFVKTVQRCMALAQLLVEQNFPAIAIHRAMTQEERLSRYQQFKDFQ 331
Query: 339 KRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDS 398
KRILVAT+L GRG+DIERVNIV NYDMP+ +DTYLHRV RAGRFGTKGLA+TFVS +D+
Sbjct: 332 KRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDETDA 391
Query: 399 DILNQV 404
LN+V
Sbjct: 392 KTLNEV 397
>gi|308510234|ref|XP_003117300.1| CRE-HEL-1 protein [Caenorhabditis remanei]
gi|308242214|gb|EFO86166.1| CRE-HEL-1 protein [Caenorhabditis remanei]
Length = 424
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 277/396 (69%), Positives = 321/396 (81%), Gaps = 1/396 (0%)
Query: 10 EDELLDYEEEDAQAPDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEH 68
E++LLDYEEE + + KG Y IHSSGFRDFLLKPE+LRAI D GFEH
Sbjct: 3 EEQLLDYEEEQEEIQEKQEVGGGDAKKTKGTYASIHSSGFRDFLLKPEILRAIGDCGFEH 62
Query: 69 PSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAY 128
PSEVQHECIPQAILGMDV+CQAKSGMGKTAVFV++TLQQ EP G+V+ + +CHTRELA+
Sbjct: 63 PSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAF 122
Query: 129 QICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSL 188
QI E+ERFS YLP +KVAVF+GG+ IK ++ L N+CP IVVGTPGR+LALAR L L
Sbjct: 123 QISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIVVGTPGRMLALARSGKLKL 182
Query: 189 KNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPM 248
V++F+LDECDKM+ DMRRDVQEI KMTP KQVMMFSATL KE+R VCK+FMQDPM
Sbjct: 183 DKVKYFVLDECDKMIGDADMRRDVQEIVKMTPQQKQVMMFSATLPKELRAVCKRFMQDPM 242
Query: 249 EIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLL 308
E+YVDDEAKLTLHGL QHY+KL E EKNRKL +LLDAL+FNQVVIFVK+V R L++LL
Sbjct: 243 EVYVDDEAKLTLHGLQQHYVKLKEAEKNRKLLNLLDALEFNQVVIFVKAVKRCEALHQLL 302
Query: 309 VECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDS 368
E NFPSI IH M+QEERL+RY+ FK+ KRILVATDL GRG+DIERVNIV NYDMP+
Sbjct: 303 TEQNFPSIAIHRQMAQEERLSRYQSFKDFQKRILVATDLFGRGMDIERVNIVFNYDMPED 362
Query: 369 ADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
+D+YLHRV RAGRFGTKGLAITFVS +D+ LN V
Sbjct: 363 SDSYLHRVARAGRFGTKGLAITFVSDENDAKTLNSV 398
>gi|320036991|gb|EFW18929.1| ATP-dependent RNA helicase SUB2 [Coccidioides posadasii str.
Silveira]
Length = 443
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 277/420 (65%), Positives = 333/420 (79%), Gaps = 22/420 (5%)
Query: 9 YEDELLDYEEEDAQAPDSVA-------------------TKANGEAAKKG-YVGIHSSGF 48
+E++L+DY +E+ Q D+ A T + A KKG YVG+HS+GF
Sbjct: 3 HEEDLIDYSDEELQTTDAAAAAATAAAAANGAAVKKGDLTVSGARADKKGSYVGVHSTGF 62
Query: 49 RDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQT 108
RDFLLKPELLRAI D GFEHPSEVQ CIP AIL +DV+CQAKSG+GKTAVFVL+TL Q
Sbjct: 63 RDFLLKPELLRAITDCGFEHPSEVQQVCIPTAILKVDVLCQAKSGLGKTAVFVLTTLNQL 122
Query: 109 EPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL--KNEC 166
EP PG+ + LV+CHTRELAYQI +E+ RFS YLPD+K AVFYGG ++ ++L K+
Sbjct: 123 EPVPGECSILVMCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPMQKDIEVLSSKDTY 182
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
P IVVGTPGR+ AL R+K LSL+N++ F+LDECDKML+ +DMRRDVQEIF+ TP DKQVM
Sbjct: 183 PNIVVGTPGRLNALVREKKLSLRNIKAFVLDECDKMLDQIDMRRDVQEIFRSTPADKQVM 242
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
MFSATLS+EIRP+CKKFM++P+E+YVDD+ KLTLHGL Q+YIKLSE EKNRKLN+LLD L
Sbjct: 243 MFSATLSQEIRPICKKFMRNPLEVYVDDDTKLTLHGLQQYYIKLSEAEKNRKLNELLDNL 302
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
+FNQV+IFVKS RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD
Sbjct: 303 EFNQVIIFVKSTLRANELDKLLRECNFPSIAVHSGVSQEERIKRYKEFKEFNKRICVATD 362
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
+ GRGIDIER+N+ INYDMP AD+YLHRVGRAGRFGTKGL+I+FVSS D L + K
Sbjct: 363 VFGRGIDIERINLAINYDMPADADSYLHRVGRAGRFGTKGLSISFVSSEDDMKTLKDIEK 422
>gi|119173036|ref|XP_001239034.1| hypothetical protein CIMG_10056 [Coccidioides immitis RS]
gi|303324075|ref|XP_003072025.1| ATP-dependent RNA helicase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|118577977|sp|Q1DI07.1|SUB2_COCIM RecName: Full=ATP-dependent RNA helicase SUB2
gi|240111735|gb|EER29880.1| ATP-dependent RNA helicase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|392869242|gb|EAS27144.2| ATP-dependent RNA helicase SUB2 [Coccidioides immitis RS]
Length = 443
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 277/420 (65%), Positives = 333/420 (79%), Gaps = 22/420 (5%)
Query: 9 YEDELLDYEEEDAQAPDSVA-------------------TKANGEAAKKG-YVGIHSSGF 48
+E++L+DY +E+ Q D+ A T + A KKG YVG+HS+GF
Sbjct: 3 HEEDLIDYSDEELQTTDAAAAAATAAAAANGAAVKKGDLTVSGARADKKGSYVGVHSTGF 62
Query: 49 RDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQT 108
RDFLLKPELLRAI D GFEHPSEVQ CIP AIL +DV+CQAKSG+GKTAVFVL+TL Q
Sbjct: 63 RDFLLKPELLRAITDCGFEHPSEVQQVCIPTAILKVDVLCQAKSGLGKTAVFVLTTLNQL 122
Query: 109 EPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL--KNEC 166
EP PG+ + LV+CHTRELAYQI +E+ RFS YLPD+K AVFYGG ++ ++L K+
Sbjct: 123 EPVPGECSILVMCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPMQKDIEVLSSKDTY 182
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
P IVVGTPGR+ AL R+K LSL+N++ F+LDECDKML+ +DMRRDVQEIF+ TP DKQVM
Sbjct: 183 PNIVVGTPGRLNALVREKKLSLRNIKAFVLDECDKMLDQIDMRRDVQEIFRSTPADKQVM 242
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
MFSATLS+EIRP+CKKFM++P+E+YVDD+ KLTLHGL Q+YIKLSE EKNRKLN+LLD L
Sbjct: 243 MFSATLSQEIRPICKKFMRNPLEVYVDDDTKLTLHGLQQYYIKLSEAEKNRKLNELLDNL 302
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
+FNQV+IFVKS RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD
Sbjct: 303 EFNQVIIFVKSTLRANELDKLLRECNFPSIAVHSGVSQEERIKRYKEFKEFNKRICVATD 362
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
+ GRGIDIER+N+ INYDMP AD+YLHRVGRAGRFGTKGL+I+FVSS D L + K
Sbjct: 363 VFGRGIDIERINLAINYDMPADADSYLHRVGRAGRFGTKGLSISFVSSEDDMKTLKDIEK 422
>gi|410917396|ref|XP_003972172.1| PREDICTED: ATP-dependent RNA helicase DDX39A-like, partial
[Takifugu rubripes]
Length = 433
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 264/383 (68%), Positives = 318/383 (83%), Gaps = 1/383 (0%)
Query: 22 QAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAI 81
+AP+S T AN + K YV IH+SGFRDFLLKPELLRAIV+ GFEHPSEVQHECIPQAI
Sbjct: 21 EAPES-WTPANKKEVKGSYVSIHNSGFRDFLLKPELLRAIVECGFEHPSEVQHECIPQAI 79
Query: 82 LGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYL 141
LGMD++CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTRELA+QI E+ERFS Y+
Sbjct: 80 LGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCHTRELAFQISKEYERFSKYM 139
Query: 142 PDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDK 201
P +KV+VF+GG+ I+ +++LK CP I+VGTPGRI AL K L LKN +HF+LDECDK
Sbjct: 140 PTVKVSVFFGGLAIRKDEEVLKKNCPHIIVGTPGRIRALILQKSLRLKNSKHFVLDECDK 199
Query: 202 MLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH 261
MLE DMR+DVQ+IF+MTPH+KQVMMFSATLSKE+RPVC++FMQDPME++VDDE KL LH
Sbjct: 200 MLEQRDMRKDVQDIFRMTPHEKQVMMFSATLSKEVRPVCRRFMQDPMEVFVDDETKLILH 259
Query: 262 GLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSG 321
G+ Q+Y K+ E+EKNRK+ DLLD L+FNQV+IFVK+V R L++LLVE FP+ IH G
Sbjct: 260 GMRQYYCKVKEVEKNRKIFDLLDVLEFNQVLIFVKTVQRCIALSQLLVEQKFPTTAIHRG 319
Query: 322 MSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 381
M+QEER+ R++ FK +RILV T+L GRG+DIERVNIV NYDMP+ +DTYLHRV RAGR
Sbjct: 320 MAQEERIARFQQFKNFQQRILVTTNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGR 379
Query: 382 FGTKGLAITFVSSASDSDILNQV 404
FGTKGLAITFVS D+ LN V
Sbjct: 380 FGTKGLAITFVSDEKDAKFLNDV 402
>gi|169778873|ref|XP_001823901.1| ATP-dependent RNA helicase sub2 [Aspergillus oryzae RIB40]
gi|238499455|ref|XP_002380962.1| ATP dependent RNA helicase (Sub2), putative [Aspergillus flavus
NRRL3357]
gi|91208172|sp|Q2U6P7.1|SUB2_ASPOR RecName: Full=ATP-dependent RNA helicase sub2
gi|83772640|dbj|BAE62768.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220692715|gb|EED49061.1| ATP dependent RNA helicase (Sub2), putative [Aspergillus flavus
NRRL3357]
Length = 441
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 279/418 (66%), Positives = 334/418 (79%), Gaps = 20/418 (4%)
Query: 9 YEDELLDYEEEDAQAPDSVA-----------------TKANGEAAKKG-YVGIHSSGFRD 50
+E++L+DY +E+ Q D+ A T + G KKG YVGIHS+GFRD
Sbjct: 3 HEEDLIDYSDEELQTTDAAATTAAPAANGDAAKKGDLTVSGGRPDKKGSYVGIHSTGFRD 62
Query: 51 FLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEP 110
FLLK ELLRAI D GFEHPSEVQ CIP AIL +DV+CQAKSG+GKTAVFVL+TL Q EP
Sbjct: 63 FLLKGELLRAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTLHQLEP 122
Query: 111 NPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQ 168
PG+ + LV+CHTRELAYQI +E+ RFS YLPD+K AVFYGG I+ ++L N+ P
Sbjct: 123 VPGECSVLVMCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPIQKDVEVLSNKESYPN 182
Query: 169 IVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMF 228
IVVGTPGR+ AL RDK LSL+NV+ F+LDECDKML+ +DMRRDVQEIF+ TP DKQVMMF
Sbjct: 183 IVVGTPGRLNALVRDKKLSLRNVKAFVLDECDKMLDQIDMRRDVQEIFRATPADKQVMMF 242
Query: 229 SATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDF 288
SATLS+EIRPVCKKFM++P+E+YVDD+ KLTLHGL Q+YIKLSE EKNRKLN+LLD+L+F
Sbjct: 243 SATLSQEIRPVCKKFMRNPLEVYVDDDTKLTLHGLQQYYIKLSEAEKNRKLNELLDSLEF 302
Query: 289 NQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLV 348
NQV+IFVKS RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD+
Sbjct: 303 NQVIIFVKSTLRANELDKLLRECNFPSIAVHSGVSQEERIKRYKEFKEFNKRICVATDVF 362
Query: 349 GRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
GRGIDIER+N+ INYD+P AD+YLHRVGRAGRFGTKGL+I+FVS+ D +L + K
Sbjct: 363 GRGIDIERINLAINYDLPADADSYLHRVGRAGRFGTKGLSISFVSNEEDEKVLKDIEK 420
>gi|310791038|gb|EFQ26567.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
Length = 433
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 275/409 (67%), Positives = 330/409 (80%), Gaps = 13/409 (3%)
Query: 10 EDELLDYEEEDAQAPDSVATKANGEAA---------KKG-YVGIHSSGFRDFLLKPELLR 59
E++L+DY +E+ Q ++ A +NG+ A KKG YVGIHS+GFRDFLLKPELLR
Sbjct: 4 EEDLIDYSDEELQTNETAAA-SNGKKADAAAGNNVDKKGSYVGIHSTGFRDFLLKPELLR 62
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
AI D GFEHPSEVQ CIPQA+LG D+ICQAKSG+GKTAVFVL+TLQQ EP G+V+ LV
Sbjct: 63 AIGDCGFEHPSEVQQTCIPQALLGGDIICQAKSGLGKTAVFVLTTLQQVEPVQGEVSVLV 122
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRI 177
+CHTRELA+QI +E+ RFS Y+PDIK VFYGG I+ + +KN+ CP I+VGTPGR+
Sbjct: 123 MCHTRELAFQIRNEYNRFSKYMPDIKTGVFYGGTPIQKDVETIKNKETCPHIIVGTPGRL 182
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
AL RDK L L +VR F+LDECDKML+ +DMRRDVQEIF+ TP KQVMMFSATLS EI+
Sbjct: 183 NALVRDKVLRLGSVRIFVLDECDKMLDQIDMRRDVQEIFRATPTQKQVMMFSATLSDEIK 242
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 297
P+C+KFMQ+P E YVD++ KLTLHGL Q+YIKL E EKNRKLN+LLD L FNQV+IFVKS
Sbjct: 243 PICRKFMQNPTEHYVDEDTKLTLHGLQQYYIKLEEREKNRKLNELLDDLQFNQVIIFVKS 302
Query: 298 VSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERV 357
RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD+ GRGIDIER+
Sbjct: 303 TLRATELDKLLRECNFPSIAVHSGVSQEERIRRYKEFKEFNKRICVATDVFGRGIDIERI 362
Query: 358 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
N+ INYD+P AD+YLHRVGRAGRFGTKGLAI+FVS+ D ++L + K
Sbjct: 363 NLAINYDLPADADSYLHRVGRAGRFGTKGLAISFVSTDQDQEVLKSIEK 411
>gi|168985557|emb|CAQ10635.1| HLA-B associated transcript 1 [Homo sapiens]
Length = 425
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 274/378 (72%), Positives = 318/378 (84%), Gaps = 14/378 (3%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPEL 57
+N+ ++ELLDYE+ D V T A G+ A K YV IHSSGFRDFLLKPEL
Sbjct: 3 ENDVDNELLDYED------DEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPEL 56
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA 117
LRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+
Sbjct: 57 LRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSV 116
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRI 177
LV+CHTRELA+QI E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRI
Sbjct: 117 LVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRI 176
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
LALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIR
Sbjct: 177 LALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR 236
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 297
PVC+KFMQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKS
Sbjct: 237 PVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKS 296
Query: 298 VSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERV 357
V R L +LLVE NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERV
Sbjct: 297 VQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERV 356
Query: 358 NIVINYDMPDSADTYLHR 375
NI NYDMP+ +DTYLHR
Sbjct: 357 NIAFNYDMPEDSDTYLHR 374
>gi|380495255|emb|CCF32532.1| ATP-dependent RNA helicase SUB2 [Colletotrichum higginsianum]
Length = 433
Score = 567 bits (1460), Expect = e-159, Method: Compositional matrix adjust.
Identities = 275/409 (67%), Positives = 330/409 (80%), Gaps = 13/409 (3%)
Query: 10 EDELLDYEEEDAQAPDSVATKANGEAA---------KKG-YVGIHSSGFRDFLLKPELLR 59
E++L+DY +E+ Q ++ A +NG+ A KKG YVGIHS+GFRDFLLKPELLR
Sbjct: 4 EEDLIDYSDEELQTNETAAA-SNGKKADAAAGNNVDKKGSYVGIHSTGFRDFLLKPELLR 62
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
AI D GFEHPSEVQ CIPQA+LG D+ICQAKSG+GKTAVFVL+TLQQ EP G+V+ LV
Sbjct: 63 AIGDCGFEHPSEVQQTCIPQALLGGDIICQAKSGLGKTAVFVLTTLQQVEPVQGEVSVLV 122
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRI 177
+CHTRELA+QI +E+ RFS Y+PDIK VFYGG I+ + +KN+ CP I+VGTPGR+
Sbjct: 123 MCHTRELAFQIRNEYNRFSKYMPDIKTGVFYGGTPIQKDVETIKNKETCPHIIVGTPGRL 182
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
AL RDK L L +VR F+LDECDKML+ +DMRRDVQEIF+ TP KQVMMFSATLS EI+
Sbjct: 183 NALVRDKVLRLGSVRIFVLDECDKMLDQIDMRRDVQEIFRATPTQKQVMMFSATLSDEIK 242
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 297
P+C+KFMQ+P E YVD++ KLTLHGL Q+YIKL E EKNRKLN+LLD L FNQV+IFVKS
Sbjct: 243 PICRKFMQNPTEHYVDEDTKLTLHGLQQYYIKLEEREKNRKLNELLDDLQFNQVIIFVKS 302
Query: 298 VSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERV 357
RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD+ GRGIDIER+
Sbjct: 303 TLRATELDKLLRECNFPSIAVHSGVSQEERIRRYKEFKEFNKRICVATDVFGRGIDIERI 362
Query: 358 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
N+ INYD+P AD+YLHRVGRAGRFGTKGLAI+FVS+ D ++L + K
Sbjct: 363 NLAINYDLPADADSYLHRVGRAGRFGTKGLAISFVSTDQDQEVLKAIEK 411
>gi|407920611|gb|EKG13800.1| Helicase [Macrophomina phaseolina MS6]
Length = 436
Score = 567 bits (1460), Expect = e-159, Method: Compositional matrix adjust.
Identities = 275/412 (66%), Positives = 330/412 (80%), Gaps = 14/412 (3%)
Query: 9 YEDELLDYEEEDAQAPDSVAT--KANGE---------AAKKG-YVGIHSSGFRDFLLKPE 56
+E++L+DY +E+ ++VAT ANG+ KKG YVGIHS+GFRDFLLK E
Sbjct: 3 HEEDLIDYSDEELGQNETVATGAAANGDQKKGDLAVTGEKKGSYVGIHSTGFRDFLLKQE 62
Query: 57 LLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVT 116
L+RAI D GFEHPSEVQ CIPQAI+G D++CQAKSG+GKTAVFVL+TLQQ EP G+
Sbjct: 63 LIRAITDCGFEHPSEVQQNCIPQAIIGSDILCQAKSGLGKTAVFVLATLQQLEPIAGETA 122
Query: 117 ALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTP 174
LVLCHTRELAYQI +E+ RFS YLPD+K +VFYGG ++ ++L N+ P I+VGTP
Sbjct: 123 VLVLCHTRELAYQIKNEYARFSKYLPDVKTSVFYGGTPMQKDIEILSNKDTHPHIIVGTP 182
Query: 175 GRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSK 234
GR+ AL R+K L L ++ F+LDECDKML+ +DMRRDVQEIF+ TP KQVMMFSATLSK
Sbjct: 183 GRLNALVREKKLRLGGIKMFVLDECDKMLDQIDMRRDVQEIFRATPTTKQVMMFSATLSK 242
Query: 235 EIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIF 294
E RP+CKKFM++P+EIYVDDE KLTLHGL Q+YIKLSE EKNRKLNDLLD L+FNQV+IF
Sbjct: 243 ETRPICKKFMRNPLEIYVDDETKLTLHGLQQYYIKLSEAEKNRKLNDLLDNLEFNQVIIF 302
Query: 295 VKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDI 354
VKS RA EL++LL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD+ GRGIDI
Sbjct: 303 VKSTLRATELDRLLRECNFPSIAVHSGVSQEERIKRYKEFKEFNKRICVATDVFGRGIDI 362
Query: 355 ERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
ER+N+ INYD+P AD+YLHRVGRAGRFGTKGL+I+FVSS D +L V K
Sbjct: 363 ERINLAINYDLPGDADSYLHRVGRAGRFGTKGLSISFVSSEQDEQVLKDVEK 414
>gi|345313468|ref|XP_001515366.2| PREDICTED: ATP-dependent RNA helicase DDX39A [Ornithorhynchus
anatinus]
Length = 440
Score = 567 bits (1460), Expect = e-159, Method: Compositional matrix adjust.
Identities = 270/402 (67%), Positives = 328/402 (81%), Gaps = 1/402 (0%)
Query: 6 DNEYEDELLDYEEE-DAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDS 64
D + D+LLDYE++ D + ++ ++ K YV IHSSGFRDFLLKPELLR I+D
Sbjct: 3 DQDIVDDLLDYEDDGDFENMETELPSPVKKSVKGSYVAIHSSGFRDFLLKPELLRCILDC 62
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFEHPSEVQ ECIPQAILG+D++CQAKSGMGKTAVFVLSTLQQ +P GQ+ AL++CHTR
Sbjct: 63 GFEHPSEVQFECIPQAILGVDLLCQAKSGMGKTAVFVLSTLQQLDPIDGQIAALIMCHTR 122
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDK 184
ELA+QI EF+RFS Y+P +KVAVF+GG++IK +++L+ CP IVVGTPGRILAL R+K
Sbjct: 123 ELAFQISKEFQRFSKYMPKVKVAVFFGGLSIKKDEEVLQKNCPHIVVGTPGRILALVRNK 182
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 244
LSLK V+HF+LDECDKMLE L MR+DVQEI+ +TPH KQ MMFSAT++KEIRP+C+KFM
Sbjct: 183 KLSLKYVKHFVLDECDKMLEQLTMRQDVQEIYHLTPHSKQCMMFSATMNKEIRPLCRKFM 242
Query: 245 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 304
QDPMEI+VDDE KLTLHGL Q Y+ L E EKNRKL DLLDAL+FNQVVIFVKSV R L
Sbjct: 243 QDPMEIFVDDEKKLTLHGLQQFYVHLKENEKNRKLFDLLDALEFNQVVIFVKSVQRCIAL 302
Query: 305 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 364
+LL+E NFP+I IH GM QEERL+RY+ FKE RILV T+L GRG+DIERVNIV NYD
Sbjct: 303 AQLLLEQNFPAISIHRGMVQEERLSRYQQFKEFESRILVTTNLFGRGMDIERVNIVFNYD 362
Query: 365 MPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
MP+ ++TYLHRV RAGRFGT+G+AI+FV+ D+ +L + K
Sbjct: 363 MPEDSNTYLHRVARAGRFGTRGMAISFVTDEVDTLVLRDILK 404
>gi|406605046|emb|CCH43517.1| ATP-dependent RNA helicase [Wickerhamomyces ciferrii]
Length = 425
Score = 566 bits (1459), Expect = e-159, Method: Compositional matrix adjust.
Identities = 272/413 (65%), Positives = 338/413 (81%), Gaps = 7/413 (1%)
Query: 7 NEYEDELLDYEE-EDAQAPDSVATKA-NGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDS 64
+E E+ELL+Y E ED +S +A +GE K YVGIHS+GF+DFLLKPEL RAIVD
Sbjct: 3 HEGEEELLEYSEPEDNIVQESTTAEAKDGEDKKGSYVGIHSTGFKDFLLKPELSRAIVDC 62
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFEHPSEV CIPQ+I G DV+CQAKSG+GKTAVFVLSTLQQ +P PG+V+ LV+CHTR
Sbjct: 63 GFEHPSEV---CIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQQLDPVPGEVSTLVICHTR 119
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALAR 182
ELAYQI +E+ RFS Y+PD+K AVFYGG +IK +LLKN+ P IVVGTPGR+ AL R
Sbjct: 120 ELAYQIRNEYLRFSKYMPDVKTAVFYGGTDIKKDAELLKNKDTAPHIVVGTPGRLNALLR 179
Query: 183 DKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKK 242
+K + L N+++F++DECDK+LE++DMRRDVQEIF+ TPH+KQVM FSATLS+EIRP+CKK
Sbjct: 180 EKYIRLNNLKNFVIDECDKVLEAVDMRRDVQEIFRATPHEKQVMFFSATLSQEIRPICKK 239
Query: 243 FMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAA 302
F+Q+P+EIYVDDEAKLTLHGL Q YIKL+E EKNR+L DLLD+L+FNQV+IFVKS +RA
Sbjct: 240 FLQNPLEIYVDDEAKLTLHGLQQFYIKLAEREKNRRLADLLDSLEFNQVIIFVKSTARAD 299
Query: 303 ELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVIN 362
ELN++L NFPSI +HSG+ QEER+ RYK FK+ NKRI V+TD+ GRGIDIER+N+ IN
Sbjct: 300 ELNRILTASNFPSIAVHSGIPQEERIARYKSFKDFNKRICVSTDVFGRGIDIERINLAIN 359
Query: 363 YDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKFMFLLIGSF 415
YD+P+ AD YLHRVGRAGRFGTKGLA++FVS+ D +L ++ + + I F
Sbjct: 360 YDLPNEADQYLHRVGRAGRFGTKGLAVSFVSTEEDETVLGKIQERFDVKIAEF 412
>gi|322789368|gb|EFZ14680.1| hypothetical protein SINV_13808 [Solenopsis invicta]
Length = 420
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 283/398 (71%), Positives = 328/398 (82%), Gaps = 2/398 (0%)
Query: 11 DELLDYEEEDA--QAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEH 68
D+LLDYE+E+ Q D + K YV IHSSGFRDFLLKPE+LRAIVD GFEH
Sbjct: 5 DDLLDYEDEEQTEQVVDGSGDIPAKKEVKGTYVSIHSSGFRDFLLKPEILRAIVDCGFEH 64
Query: 69 PSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAY 128
PSEVQHECIPQA+LGMD++CQAKSGMGKTAVFVL+TLQQ E QV LV+CHTRELA+
Sbjct: 65 PSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEWTENQVYVLVMCHTRELAF 124
Query: 129 QICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSL 188
QI E+ERFS Y+ +KV VF+GG+ I+ +++LK CP IVVGTPGRILAL R+K L+L
Sbjct: 125 QISKEYERFSKYMQHVKVGVFFGGLPIQKDEEVLKTVCPHIVVGTPGRILALVRNKKLNL 184
Query: 189 KNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPM 248
K+++HFILDECDKMLE LDMRRDVQEIF+ TPH KQVMMFSATLSK+IRPVCKKFMQDPM
Sbjct: 185 KHLKHFILDECDKMLELLDMRRDVQEIFRSTPHSKQVMMFSATLSKDIRPVCKKFMQDPM 244
Query: 249 EIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLL 308
E+YVDDEAKLTL+GL QHY+KL E EKN+KL +LLD L+FNQVVIFVKSV R L +LL
Sbjct: 245 EVYVDDEAKLTLNGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCMALAQLL 304
Query: 309 VECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDS 368
E NFP+I IH GM+QEERL+RY+ FK+ KRILVAT+L GRG+DIERVNIV NYDMP+
Sbjct: 305 TEQNFPAIGIHRGMTQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPED 364
Query: 369 ADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
+DTYLHRV RAGRFGTKGLAIT VS SD+ ILN V +
Sbjct: 365 SDTYLHRVARAGRFGTKGLAITLVSDESDAKILNDVQE 402
>gi|21068659|emb|CAD21558.1| HEL protein [Chironomus tentans]
Length = 421
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 278/394 (70%), Positives = 325/394 (82%), Gaps = 1/394 (0%)
Query: 11 DELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPS 70
D+LLDYE+E+ Q +V + + K YV IHSSGFRDFLLKPE+LRAIVD GFEHPS
Sbjct: 5 DDLLDYEDEE-QTEQAVVDASEKKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCGFEHPS 63
Query: 71 EVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 130
VQHECIPQA+LGMD++CQAKSGMGKTAVFVL+TLQQ EP Q LV+CHTRELA+QI
Sbjct: 64 AVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPTDNQAYVLVMCHTRELAFQI 123
Query: 131 CHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKN 190
E+ERFS Y+ +KVAVF+GG+ I+ +++LK P IVVGTPGR+LAL R K L+LKN
Sbjct: 124 SKEYERFSKYMSGVKVAVFFGGMPIQKDEEVLKTTTPHIVVGTPGRVLALIRSKKLNLKN 183
Query: 191 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 250
++HFILDECDKMLE LDMR+DVQEIF+ TPH KQVMMFSATLSKEIRP+CKKFMQDPME+
Sbjct: 184 LKHFILDECDKMLEQLDMRKDVQEIFRNTPHGKQVMMFSATLSKEIRPICKKFMQDPMEV 243
Query: 251 YVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 310
YVDDE KLTLHGL QHY+KL E EKN+KL +LLD L+FNQVVIFVKSV R L LL +
Sbjct: 244 YVDDETKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCEALATLLTD 303
Query: 311 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 370
NFP+I IH+ M+QEERL +Y+ FK+ KRILVAT+L GRG+DIERVNIV NYDMP+ +D
Sbjct: 304 QNFPAIAIHAEMAQEERLAKYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSD 363
Query: 371 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
TYLHRV RAGRFGTKGLAITFVS +D+ ILN V
Sbjct: 364 TYLHRVARAGRFGTKGLAITFVSDENDAKILNSV 397
>gi|432094533|gb|ELK26087.1| ATP-dependent RNA helicase DDX39A [Myotis davidii]
Length = 435
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 270/383 (70%), Positives = 313/383 (81%), Gaps = 16/383 (4%)
Query: 22 QAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAI 81
QAP + K YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAI
Sbjct: 20 QAPTESTPVPPKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAI 79
Query: 82 LGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYL 141
LGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQVT LV+CHTRELA+QI E+ERFS Y+
Sbjct: 80 LGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYM 139
Query: 142 PDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDK 201
P +KV+VF+GG++IK +++LK CP +VVGTPGRILAL R++ L+L+NV+HF+LDECDK
Sbjct: 140 PSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNRSLNLRNVKHFVLDECDK 199
Query: 202 MLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH 261
MLE LDMRRDVQEIF++TP KQ MMFSATLSKEIRPVC+KFMQDPME++VDDE KLTLH
Sbjct: 200 MLEQLDMRRDVQEIFRLTPRGKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLH 259
Query: 262 GLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSG 321
GL Q+Y+KL + EKNRKL DLLD L+FNQ LLVE NFP+I IH G
Sbjct: 260 GLQQYYVKLKDSEKNRKLFDLLDVLEFNQ----------------LLVEQNFPAIAIHRG 303
Query: 322 MSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 381
M+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYDMP+ +DTYLHRV RAGR
Sbjct: 304 MAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGR 363
Query: 382 FGTKGLAITFVSSASDSDILNQV 404
FGTKGLAITFVS +D+ ILN V
Sbjct: 364 FGTKGLAITFVSDENDAKILNDV 386
>gi|302698637|ref|XP_003038997.1| hypothetical protein SCHCODRAFT_65145 [Schizophyllum commune H4-8]
gi|300112694|gb|EFJ04095.1| hypothetical protein SCHCODRAFT_65145 [Schizophyllum commune H4-8]
Length = 437
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 275/413 (66%), Positives = 324/413 (78%), Gaps = 16/413 (3%)
Query: 11 DELLDYEEEDAQAPDSVATKANGEAAK-------------KGYVGIHSSGFRDFLLKPEL 57
+EL+DYE+E+ P+ A A + GIHS+GFRDFLLKPEL
Sbjct: 6 EELIDYEDENDVIPNGGAAAPATNGAAKAAAGAGEGGEEKPDFSGIHSTGFRDFLLKPEL 65
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA 117
LR+I D GFEHPSEVQ ECIPQA+LGMDV+CQAKSG GKTAVFVL+TLQQ EP G+V
Sbjct: 66 LRSISDLGFEHPSEVQQECIPQAVLGMDVLCQAKSGHGKTAVFVLATLQQLEPVDGEVAV 125
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL--KNECPQIVVGTPG 175
+VLCHTRELA+QI +E+ RF+ Y+P I+V+ FYGG + ++L KN CP I+V TPG
Sbjct: 126 IVLCHTRELAFQIRNEYTRFAKYMPQIRVSTFYGGTPVSKDAEILRDKNACPHIIVATPG 185
Query: 176 RILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKE 235
R+ AL RDK L K+V+HF+LDECDKMLE LDMRRDVQEIF+ TPH KQVMMFSATL+KE
Sbjct: 186 RLNALVRDKVLDAKHVKHFVLDECDKMLEQLDMRRDVQEIFRATPHHKQVMMFSATLAKE 245
Query: 236 IRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFV 295
IR CKKFM +P+EI+VDDE KLTLHGL QHY+KL E +KNRKLNDLLD L+FNQVVIFV
Sbjct: 246 IRATCKKFMANPLEIFVDDETKLTLHGLQQHYVKLEEAQKNRKLNDLLDTLEFNQVVIFV 305
Query: 296 KSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIE 355
KSV+RA EL+KLLV CNFPSI IHSG+ QEER+ RY+ FK KRILVATD+ GRGID+E
Sbjct: 306 KSVARAIELDKLLVSCNFPSISIHSGLQQEERINRYQAFKNFEKRILVATDIFGRGIDVE 365
Query: 356 RVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV-SKF 407
RVNIVINYD P AD+YLHRVGRAGRFGTKGLAITFVSS +D ++ + S+F
Sbjct: 366 RVNIVINYDAPPDADSYLHRVGRAGRFGTKGLAITFVSSDADQQVMAAIQSRF 418
>gi|189502902|gb|ACE06832.1| unknown [Schistosoma japonicum]
gi|226469666|emb|CAX76663.1| Helicase at 25E [Schistosoma japonicum]
gi|226469670|emb|CAX76665.1| Helicase at 25E [Schistosoma japonicum]
gi|226469672|emb|CAX76666.1| Helicase at 25E [Schistosoma japonicum]
gi|226469674|emb|CAX76667.1| Helicase at 25E [Schistosoma japonicum]
gi|226469676|emb|CAX76668.1| Helicase at 25E [Schistosoma japonicum]
gi|226469678|emb|CAX76669.1| Helicase at 25E [Schistosoma japonicum]
gi|226473012|emb|CAX71192.1| Helicase at 25E [Schistosoma japonicum]
gi|226473014|emb|CAX71193.1| Helicase at 25E [Schistosoma japonicum]
gi|226473016|emb|CAX71194.1| Helicase at 25E [Schistosoma japonicum]
gi|226473018|emb|CAX71195.1| Helicase at 25E [Schistosoma japonicum]
gi|226473020|emb|CAX71196.1| Helicase at 25E [Schistosoma japonicum]
Length = 426
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 273/402 (67%), Positives = 325/402 (80%), Gaps = 8/402 (1%)
Query: 10 EDELLDYEEEDAQAPDSVATKANGEA-AKKG----YVGIHSSGFRDFLLKPELLRAIVDS 64
E ELLDYE+E+ + T+ NGEA AKKG YV IHSSGFRDF+LKPELLRAIVD
Sbjct: 4 EAELLDYEDEEQETVQE--TRPNGEAVAKKGVKGAYVTIHSSGFRDFILKPELLRAIVDC 61
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPN-PGQVTALVLCHT 123
GFEHPSEVQHECIPQAIL MDV+CQAKSGMGKTAVFV++TLQQ +P + LVLCHT
Sbjct: 62 GFEHPSEVQHECIPQAILSMDVLCQAKSGMGKTAVFVIATLQQLDPEGEANTSVLVLCHT 121
Query: 124 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARD 183
RELA+QI E+ERFS Y+P IKV VF+GG+ I+ + L IVVGTPGRIL L R
Sbjct: 122 RELAFQISKEYERFSKYMPKIKVGVFFGGMPIRKDIETLTKSPVHIVVGTPGRILDLVRS 181
Query: 184 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF 243
K L L++V+HFI+DECDKML++LDMRRDVQEIF+MTPH KQVMMFSAT+SKEIRPVC+ F
Sbjct: 182 KTLKLQHVKHFIIDECDKMLDTLDMRRDVQEIFRMTPHQKQVMMFSATMSKEIRPVCRNF 241
Query: 244 MQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAE 303
MQDP+EI++++++KLTLHGL QHY+K+ E EKNRKL +LLD L FNQV+IFVKSV R
Sbjct: 242 MQDPLEIFIENDSKLTLHGLRQHYVKVKENEKNRKLFELLDELQFNQVIIFVKSVQRCMA 301
Query: 304 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 363
L +LLV+ NFP+I +H M+QEERL RY+ FK KR+LVAT+L GRG+DIERVNIV NY
Sbjct: 302 LAQLLVDQNFPAIAMHRNMAQEERLERYQAFKNFQKRLLVATNLFGRGMDIERVNIVFNY 361
Query: 364 DMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVS 405
DMP+ +DTYLHRV RAGRFGTKGLAITF+S D+ +LN+V
Sbjct: 362 DMPEDSDTYLHRVARAGRFGTKGLAITFISDEQDAKVLNEVQ 403
>gi|476338|gb|AAB65852.1| putative RNA helicase, partial [Caenorhabditis elegans]
Length = 417
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 276/397 (69%), Positives = 321/397 (80%), Gaps = 9/397 (2%)
Query: 10 EDELLDYEEEDAQAPDSVATKANGEAAK-KG-YVGIHSSGFRDFLLKPELLRAIVDSGFE 67
E++LLDYEEE + D G+A K KG Y IHSSGFRDFLLKPE+LRAI D GFE
Sbjct: 2 EEQLLDYEEEQEEIQDKQPEVGGGDARKTKGTYASIHSSGFRDFLLKPEILRAIGDCGFE 61
Query: 68 HPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELA 127
HPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFV++TLQQ EP G+V+ + +CHTRELA
Sbjct: 62 HPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELA 121
Query: 128 YQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLS 187
+QI E+ERFS YLP +KVAVF+GG+ IK ++ L N+CP IVVGTPGR+LALAR L
Sbjct: 122 FQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIVVGTPGRMLALARSGKLK 181
Query: 188 LKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDP 247
L V++F+LDECDKM+ DMRRDVQEI KQVMMFSATL KE+R VCK+FMQDP
Sbjct: 182 LDKVKYFVLDECDKMIGDADMRRDVQEI-------KQVMMFSATLPKELRTVCKRFMQDP 234
Query: 248 MEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKL 307
ME+YVDDEAKLTLHGL QHY+KL E EKNR+L +LLDAL+FNQVVIFVK+V R L++L
Sbjct: 235 MEVYVDDEAKLTLHGLQQHYVKLKEAEKNRRLLNLLDALEFNQVVIFVKAVKRCEALHQL 294
Query: 308 LVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPD 367
L E NFPSI IH M+QEERL+RY+ FK+ KRILVATDL GRG+DIERVNIV NYDMP+
Sbjct: 295 LTEQNFPSIAIHRQMAQEERLSRYQAFKDFQKRILVATDLFGRGMDIERVNIVFNYDMPE 354
Query: 368 SADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
+D+YLHRV RAGRFGTKGLAITFVS +D+ LN V
Sbjct: 355 DSDSYLHRVARAGRFGTKGLAITFVSDENDAKTLNSV 391
>gi|380799051|gb|AFE71401.1| ATP-dependent RNA helicase DDX39A, partial [Macaca mulatta]
Length = 375
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 262/351 (74%), Positives = 306/351 (87%)
Query: 55 PELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQ 114
PELLRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQ
Sbjct: 1 PELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQ 60
Query: 115 VTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTP 174
VT LV+CHTRELA+QI E+ERFS Y+P +KV+VF+GG++IK +++LK CP +VVGTP
Sbjct: 61 VTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTP 120
Query: 175 GRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSK 234
GRILAL R++ SLKNV+HF+LDECDKMLE LDMRRDVQEIF++TPH+KQ MMFSATLSK
Sbjct: 121 GRILALVRNRSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSK 180
Query: 235 EIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIF 294
+IRPVC+KFMQDPME++VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQV+IF
Sbjct: 181 DIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVIIF 240
Query: 295 VKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDI 354
VKSV R L +LLVE NFP+I IH GM+QEERL+RY+ FK+ +RILVAT+L GRG+DI
Sbjct: 241 VKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDI 300
Query: 355 ERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVS 405
ERVNIV NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN V
Sbjct: 301 ERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQ 351
>gi|29841421|gb|AAP06453.1| similar to NM_019693 HLA-B associated transcript 1 in Homo sapiens
[Schistosoma japonicum]
Length = 410
Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust.
Identities = 273/402 (67%), Positives = 325/402 (80%), Gaps = 8/402 (1%)
Query: 10 EDELLDYEEEDAQAPDSVATKANGEA-AKKG----YVGIHSSGFRDFLLKPELLRAIVDS 64
E ELLDYE+E+ + T+ NGEA AKKG YV IHSSGFRDF+LKPELLRAIVD
Sbjct: 4 EAELLDYEDEEQETVQE--TRPNGEAVAKKGVKGAYVTIHSSGFRDFILKPELLRAIVDC 61
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEP-NPGQVTALVLCHT 123
GFEHPSEVQHECIPQAIL MDV+CQAKSGMGKTAVFV++TLQQ +P + LVLCHT
Sbjct: 62 GFEHPSEVQHECIPQAILSMDVLCQAKSGMGKTAVFVIATLQQLDPEGEANTSVLVLCHT 121
Query: 124 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARD 183
RELA+QI E+ERFS Y+P IKV VF+GG+ I+ + L IVVGTPGRIL L R
Sbjct: 122 RELAFQISKEYERFSKYMPKIKVGVFFGGMPIRKDIETLTKSPVHIVVGTPGRILDLVRS 181
Query: 184 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF 243
K L L++V+HFI+DECDKML++LDMRRDVQEIF+MTPH KQVMMFSAT+SKEIRPVC+ F
Sbjct: 182 KTLKLQHVKHFIIDECDKMLDTLDMRRDVQEIFRMTPHQKQVMMFSATMSKEIRPVCRNF 241
Query: 244 MQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAE 303
MQDP+EI++++++KLTLHGL QHY+K+ E EKNRKL +LLD L FNQV+IFVKSV R
Sbjct: 242 MQDPLEIFIENDSKLTLHGLRQHYVKVKENEKNRKLFELLDELQFNQVIIFVKSVQRCMA 301
Query: 304 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 363
L +LLV+ NFP+I +H M+QEERL RY+ FK KR+LVAT+L GRG+DIERVNIV NY
Sbjct: 302 LAQLLVDQNFPAIAMHRNMAQEERLERYQAFKNFQKRLLVATNLFGRGMDIERVNIVFNY 361
Query: 364 DMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVS 405
DMP+ +DTYLHRV RAGRFGTKGLAITF+S D+ +LN+V
Sbjct: 362 DMPEDSDTYLHRVARAGRFGTKGLAITFISDEQDAKVLNEVQ 403
>gi|256070997|ref|XP_002571828.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
gi|353228609|emb|CCD74780.1| putative dead box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 426
Score = 563 bits (1451), Expect = e-158, Method: Compositional matrix adjust.
Identities = 273/402 (67%), Positives = 324/402 (80%), Gaps = 8/402 (1%)
Query: 10 EDELLDYEEEDAQAPDSVATKANGEA-AKKG----YVGIHSSGFRDFLLKPELLRAIVDS 64
E ELLDYE+E+ + + NGEA AKKG YV IHSSGFRDF+LKPELLRAIVD
Sbjct: 4 EAELLDYEDEEQETVQE--ARPNGEATAKKGVKGAYVTIHSSGFRDFILKPELLRAIVDC 61
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPN-PGQVTALVLCHT 123
GFEHPSEVQHECIPQAIL MDV+CQAKSGMGKTAVFV++TLQQ +P T LVLCHT
Sbjct: 62 GFEHPSEVQHECIPQAILSMDVLCQAKSGMGKTAVFVIATLQQLDPEGEANTTVLVLCHT 121
Query: 124 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARD 183
RELA+QI E+ERFS Y+P IKV VF+GG+ I+ + L IVVGTPGRIL L R
Sbjct: 122 RELAFQISKEYERFSKYMPKIKVGVFFGGMPIRKDIETLTKSPVHIVVGTPGRILDLVRS 181
Query: 184 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF 243
K L L++V+HFI+DECDKML++LDMRRDVQEIF+MTPH KQVMMFSAT+SKEIRPVC+ F
Sbjct: 182 KTLKLQHVKHFIIDECDKMLDTLDMRRDVQEIFRMTPHQKQVMMFSATMSKEIRPVCRNF 241
Query: 244 MQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAE 303
MQDP+EI++++++KLTLHGL QHY+K+ E EKNRKL +LLD L FNQV+IFVKSV R
Sbjct: 242 MQDPLEIFIENDSKLTLHGLRQHYVKVKENEKNRKLFELLDELQFNQVIIFVKSVQRCMA 301
Query: 304 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 363
L +LLV+ NFP+I +H M+QEERL RY+ FK KR+LVAT+L GRG+DIERVNIV NY
Sbjct: 302 LAQLLVDQNFPAIAMHRNMAQEERLERYQAFKNFQKRLLVATNLFGRGMDIERVNIVFNY 361
Query: 364 DMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVS 405
DMP+ +DTYLHRV RAGRFGTKGLAITF+S D+ +LN+V
Sbjct: 362 DMPEDSDTYLHRVARAGRFGTKGLAITFISDEVDAKVLNEVQ 403
>gi|400600996|gb|EJP68664.1| DEAD/DEAH box helicase [Beauveria bassiana ARSEF 2860]
Length = 432
Score = 563 bits (1451), Expect = e-158, Method: Compositional matrix adjust.
Identities = 274/417 (65%), Positives = 330/417 (79%), Gaps = 10/417 (2%)
Query: 9 YEDELLDYEEEDAQAPDSV--ATK-----ANGEAAKKG-YVGIHSSGFRDFLLKPELLRA 60
+E++L+DY +E+ A ++ ATK AN KKG YVGIHS+GFRDFLLKPELLRA
Sbjct: 3 HEEDLIDYSDEEIGANETANAATKKGELAANSNVDKKGSYVGIHSTGFRDFLLKPELLRA 62
Query: 61 IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVL 120
I D GFEHPSEVQ CIPQA+LG D+ICQAKSG+GKTAVFVL+TLQQ EP G+V+ +V+
Sbjct: 63 IGDCGFEHPSEVQQTCIPQALLGGDIICQAKSGLGKTAVFVLATLQQVEPVNGEVSVVVM 122
Query: 121 CHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRIL 178
CHTRELAYQI E+ RFS Y+PDIK VFYGG IK + LKN+ CP I+VGTPGR+
Sbjct: 123 CHTRELAYQIRDEYNRFSKYMPDIKTGVFYGGTPIKTDVETLKNKDTCPHIIVGTPGRLK 182
Query: 179 ALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRP 238
AL RDK L L +VR F+LDECDKML+ DMR DVQ++F+ TPH KQVMMFSATLS+E++P
Sbjct: 183 ALVRDKALRLGSVRIFVLDECDKMLDQPDMRTDVQDVFRATPHQKQVMMFSATLSEEVKP 242
Query: 239 VCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSV 298
+CKKFMQ+P E YVD++ KLTLHGL Q+YIKL E EKNRKLNDLLD L FNQV+IFV+S
Sbjct: 243 ICKKFMQNPTEHYVDEDTKLTLHGLQQYYIKLDEKEKNRKLNDLLDELQFNQVIIFVRST 302
Query: 299 SRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVN 358
+RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE KRI VATD+ GRGIDIER+N
Sbjct: 303 ARATELDKLLRECNFPSIAVHSGVSQEERIRRYKEFKEFKKRICVATDVFGRGIDIERIN 362
Query: 359 IVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKFMFLLIGSF 415
+ INYD+ A +YLHRVGRAGRFGTKGLAI+F+SS D +L ++ K + + F
Sbjct: 363 LAINYDLSADASSYLHRVGRAGRFGTKGLAISFISSEDDQKVLGEIEKRFEVALPEF 419
>gi|159491657|ref|XP_001703776.1| subunit of exon junction complex [Chlamydomonas reinhardtii]
gi|158270457|gb|EDO96302.1| subunit of exon junction complex [Chlamydomonas reinhardtii]
Length = 435
Score = 563 bits (1450), Expect = e-158, Method: Compositional matrix adjust.
Identities = 274/391 (70%), Positives = 315/391 (80%), Gaps = 15/391 (3%)
Query: 29 TKANGEAA--KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDV 86
+A G+A KKGYVGIH++GF++ +LKPELL+AI D GFEHPSEVQHECIP AILG DV
Sbjct: 21 AEAVGKAGQEKKGYVGIHATGFKELMLKPELLQAIADCGFEHPSEVQHECIPHAILGNDV 80
Query: 87 ICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKV 146
+CQAKSGMGKTAVFVLS LQQ +P + A++LCHTRELA+QICHEF RFS + + +
Sbjct: 81 LCQAKSGMGKTAVFVLSILQQLDPKANECHAIILCHTRELAFQICHEFTRFSARMKGVTI 140
Query: 147 AVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESL 206
FYGG+ + +K+ LK P IVVGTPGRI LA++ L LK+VR F+LDECDKMLE L
Sbjct: 141 GNFYGGIPVTQNKETLKKAVPNIVVGTPGRIKQLAKEGALPLKHVRFFVLDECDKMLEKL 200
Query: 207 DMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQH 266
DMR D QEIFK+TPH+KQVMMFSATL++++R VCKKFM +P E+YVDDE+KLTLHGLVQH
Sbjct: 201 DMRADCQEIFKLTPHEKQVMMFSATLNQDMRGVCKKFMTNPQEVYVDDESKLTLHGLVQH 260
Query: 267 YIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEE 326
Y+ L E EKNRKLNDLLDALDFNQVVIFVKSV+RA LN LL ECNFPS+CI+ GM QEE
Sbjct: 261 YVMLHEEEKNRKLNDLLDALDFNQVVIFVKSVARAKMLNTLLNECNFPSVCIYGGMDQEE 320
Query: 327 RLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDS-------------ADTYL 373
R+ YK FKEG RILVATDLVGRGIDIERVNIVINYDMP+S ADTYL
Sbjct: 321 RIKVYKHFKEGKHRILVATDLVGRGIDIERVNIVINYDMPESDDKSKGESKHGNGADTYL 380
Query: 374 HRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
HRVGRAGRFGTKGLAITFVSS DS +LN V
Sbjct: 381 HRVGRAGRFGTKGLAITFVSSQEDSAVLNAV 411
>gi|254565085|ref|XP_002489653.1| Component of the TREX complex required for nuclear mRNA export
[Komagataella pastoris GS115]
gi|238029449|emb|CAY67372.1| Component of the TREX complex required for nuclear mRNA export
[Komagataella pastoris GS115]
gi|328350072|emb|CCA36472.1| ATP-dependent RNA helicase UAP56/SUB2 [Komagataella pastoris CBS
7435]
Length = 436
Score = 563 bits (1450), Expect = e-158, Method: Compositional matrix adjust.
Identities = 273/420 (65%), Positives = 339/420 (80%), Gaps = 11/420 (2%)
Query: 7 NEYEDELLDYE--EEDAQAP------DSVATKANGEAAKKG-YVGIHSSGFRDFLLKPEL 57
+E E+ELLDY EE A AP D A + EA KKG YVG+H++GF+DFLL+PEL
Sbjct: 3 HEGEEELLDYSDSEEIAVAPSGTTTADKEAGEDGKEANKKGSYVGVHATGFQDFLLRPEL 62
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA 117
RAI D GFEHPSEVQ CIPQ+ILG DV+CQAKSG+GKTAVFVLSTLQQ +P+PG+V+
Sbjct: 63 TRAIRDCGFEHPSEVQQVCIPQSILGNDVLCQAKSGLGKTAVFVLSTLQQLDPSPGEVSV 122
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPG 175
LV+C+TRELAYQI +E+ RFS Y+P++K VFYGG I +++LKN+ CP IVV TPG
Sbjct: 123 LVICNTRELAYQIKNEYARFSKYMPEVKTEVFYGGTQIAKDEEILKNKDTCPHIVVATPG 182
Query: 176 RILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKE 235
R+ AL RDK +++KNV++F++DECDK+LE+L MRRDVQ IF+ TP KQVMMFSATLS E
Sbjct: 183 RLNALVRDKVMNVKNVKNFVIDECDKVLENLSMRRDVQSIFRETPFQKQVMMFSATLSTE 242
Query: 236 IRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFV 295
+R +CKKFMQ+P+EIYVD+EAKLTLHGL Q+YIKL+E +KNRKL++LLD+LDFNQV+IFV
Sbjct: 243 MRKICKKFMQNPLEIYVDNEAKLTLHGLQQYYIKLTEADKNRKLSELLDSLDFNQVIIFV 302
Query: 296 KSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIE 355
KSV RA LN+LL E NFPSI IHSG+ Q+ER+ RYK FKE NKRI VATD++GRGID+E
Sbjct: 303 KSVKRAEYLNRLLNENNFPSISIHSGLPQQERIERYKSFKEFNKRICVATDVLGRGIDVE 362
Query: 356 RVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKFMFLLIGSF 415
R+N+ INYD+P+ + YLHRVGRAGRFGTKGLAI+F+SS D+ IL Q+ + I F
Sbjct: 363 RINLAINYDLPNESAQYLHRVGRAGRFGTKGLAISFISSDEDNTILEQIQDRFDVKIAEF 422
>gi|340975684|gb|EGS22799.1| hypothetical protein CTHT_0012740 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 434
Score = 563 bits (1450), Expect = e-158, Method: Compositional matrix adjust.
Identities = 272/409 (66%), Positives = 328/409 (80%), Gaps = 12/409 (2%)
Query: 10 EDELLDYEEED----AQAPDSVATKANGEAA-----KKG-YVGIHSSGFRDFLLKPELLR 59
E++L+DY +++ + P + KA+ A+ KKG YVGIHS+GFRDFLLKPELLR
Sbjct: 4 EEDLIDYSDDELNNESTGPSANGKKADAAASTQNVDKKGSYVGIHSTGFRDFLLKPELLR 63
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
AI D GFEHPSEVQ CIPQA+LG D+ICQAKSG+GKTAVFVL+TLQQ EP PG+ + LV
Sbjct: 64 AIADCGFEHPSEVQQTCIPQAMLGGDIICQAKSGLGKTAVFVLTTLQQVEPVPGECSVLV 123
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRI 177
+CHTRELA+QI +E+ RFS Y+P+IK VFYGG I+ ++LKN+ P I+VGTPGR+
Sbjct: 124 MCHTRELAFQIRNEYNRFSKYMPEIKTGVFYGGTPIQKDAEILKNKDTHPHIIVGTPGRL 183
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
AL R+K L L +VR F+LDECDKML+ +DMRRDVQEIF+ TP KQVMMFSATLS EI+
Sbjct: 184 NALVREKYLRLGSVRMFVLDECDKMLDQIDMRRDVQEIFRATPQQKQVMMFSATLSDEIK 243
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 297
P+C+KFMQ+P E YVD++ KLTLHGL Q+YI L E EKNRKLN+LLD L FNQV+IFVKS
Sbjct: 244 PICRKFMQNPTEHYVDEDTKLTLHGLQQYYIALEEREKNRKLNELLDELQFNQVIIFVKS 303
Query: 298 VSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERV 357
RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD+ GRGIDIER+
Sbjct: 304 TLRATELDKLLRECNFPSIAVHSGISQEERIRRYKEFKEFNKRICVATDVFGRGIDIERI 363
Query: 358 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
N+ INYDMP AD+YLHRVGRAGRFGTKGLAI+FVSS D ++L + K
Sbjct: 364 NLAINYDMPADADSYLHRVGRAGRFGTKGLAISFVSSDQDREVLKAIEK 412
>gi|322709683|gb|EFZ01259.1| ATP-dependent RNA helicase [Metarhizium anisopliae ARSEF 23]
Length = 434
Score = 562 bits (1449), Expect = e-158, Method: Compositional matrix adjust.
Identities = 271/410 (66%), Positives = 326/410 (79%), Gaps = 12/410 (2%)
Query: 9 YEDELLDYEEEDAQAPDSVATKANGEAA---------KKG-YVGIHSSGFRDFLLKPELL 58
+E++L+DY +E+ A ++ A +NG+ KKG YVGIHS+GFRDFLLKPELL
Sbjct: 3 HEEDLIDYSDEEIGANETAAAGSNGKKGELAASTDVDKKGSYVGIHSTGFRDFLLKPELL 62
Query: 59 RAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTAL 118
RAI D GFEHPSEVQ CIPQA+LG D+ICQAKSG+GKTAVFVL+TLQQ EP G+V+ +
Sbjct: 63 RAIGDCGFEHPSEVQQTCIPQALLGGDIICQAKSGLGKTAVFVLATLQQVEPVNGEVSVV 122
Query: 119 VLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGR 176
V+CHTRELAYQI E+ RFS Y+PDIK VF+GG IK + LKN+ CP I+VGTPGR
Sbjct: 123 VMCHTRELAYQIRDEYNRFSKYMPDIKTGVFFGGTPIKTDMETLKNKDTCPHIIVGTPGR 182
Query: 177 ILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEI 236
+ AL RDK L L +VR F+LDECDKML+ DMR DVQ++F+ TP KQVMMFSATL+ EI
Sbjct: 183 LKALVRDKALRLGSVRIFVLDECDKMLDQPDMRTDVQDVFRATPTQKQVMMFSATLANEI 242
Query: 237 RPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVK 296
+P+C+KFMQ+P E YVD++ KLTLHGL Q+YIKL E EKNRKLN+LLD L FNQV+IFVK
Sbjct: 243 KPICRKFMQNPTEHYVDEDTKLTLHGLQQYYIKLEEKEKNRKLNELLDELQFNQVIIFVK 302
Query: 297 SVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIER 356
S RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE KRI VATD+ GRGIDIER
Sbjct: 303 STIRATELDKLLRECNFPSIAVHSGVSQEERIKRYKEFKEFKKRICVATDVFGRGIDIER 362
Query: 357 VNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
+N+ INYD+P A +YLHRVGRAGRFGTKGLAI+FVSS D D+L ++ K
Sbjct: 363 INLAINYDLPADASSYLHRVGRAGRFGTKGLAISFVSSDQDQDVLKEIEK 412
>gi|324510197|gb|ADY44267.1| Spliceosome RNA helicase BAT1 [Ascaris suum]
Length = 429
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 287/404 (71%), Positives = 329/404 (81%), Gaps = 7/404 (1%)
Query: 7 NEYEDELLDYEEEDAQAPDSVATKA-NGEAAKK----GYVGIHSSGFRDFLLKPELLRAI 61
N ED+LLDYEEE +A D ATKA NG A+K Y IHSSGFRDFLLKPELLRAI
Sbjct: 3 NMDEDQLLDYEEEQEEATD--ATKAENGTTAEKKIKGTYASIHSSGFRDFLLKPELLRAI 60
Query: 62 VDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLC 121
VD GFEHPSEVQHECIPQAILGMD++CQAKSGMGKTAVFVL+TLQQ EP G+V+ LV+C
Sbjct: 61 VDCGFEHPSEVQHECIPQAILGMDIVCQAKSGMGKTAVFVLATLQQLEPVDGEVSVLVMC 120
Query: 122 HTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALA 181
HTRELA+QI E+ERFS Y P IK+ VF+GG+ IK +++LKN P IVVGTPGR L LA
Sbjct: 121 HTRELAFQISKEYERFSKYYPGIKIGVFFGGMPIKKDEEVLKNNTPHIVVGTPGRTLQLA 180
Query: 182 RDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCK 241
R L L +++F+LDECDKM+ DMRRDVQEI KMTP +KQVMMFSATL K++R VCK
Sbjct: 181 RQGSLKLNKIKYFVLDECDKMIGDNDMRRDVQEIVKMTPQEKQVMMFSATLPKDLRAVCK 240
Query: 242 KFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRA 301
KFMQDPME+YVDDEAKLTLHGL QHY+KL E EKN+KL +LLD L+FNQVVIFV+SV R
Sbjct: 241 KFMQDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLLELLDQLEFNQVVIFVRSVQRC 300
Query: 302 AELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVI 361
L++LL E NFPSI IH GM QEERL+RY+ FK+ KRILVAT+L GRG+DIERVNIV
Sbjct: 301 GALHRLLSEQNFPSIAIHRGMPQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVF 360
Query: 362 NYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVS 405
NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN V
Sbjct: 361 NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQ 404
>gi|425771595|gb|EKV10033.1| ATP-dependent RNA helicase SUB2 [Penicillium digitatum Pd1]
gi|425777099|gb|EKV15289.1| ATP-dependent RNA helicase SUB2 [Penicillium digitatum PHI26]
Length = 442
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 275/419 (65%), Positives = 332/419 (79%), Gaps = 21/419 (5%)
Query: 9 YEDELLDYEEEDAQAPDSVATKA-----NGEAAKKG--------------YVGIHSSGFR 49
+E++L+DY +E+ Q + T A NG+A K+G YVGIHS+GFR
Sbjct: 3 HEEDLIDYSDEELQTTTAPTTTAAPATTNGDADKQGDLTVTGGRPDKKGSYVGIHSTGFR 62
Query: 50 DFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTE 109
DFLLK ELLRAI D GFEHPSEVQ CIP +IL +DV+CQAKSG+GKTAVFVL+TL Q E
Sbjct: 63 DFLLKGELLRAITDCGFEHPSEVQQVCIPTSILNVDVLCQAKSGLGKTAVFVLTTLHQLE 122
Query: 110 PNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CP 167
P PG+ LV+CHTRELAYQI +E+ RFS YLPD+K AVFYGG I+ ++L N+ P
Sbjct: 123 PVPGECQILVMCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPIQKDVEILSNKETHP 182
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
IVV TPGR+ AL RDK LSL+NV+ F+LDECDKML+ +DMRRDVQEIF+ TP DKQVMM
Sbjct: 183 NIVVATPGRLNALVRDKKLSLRNVKAFVLDECDKMLDQIDMRRDVQEIFRATPADKQVMM 242
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSATLS+EIRP+CKKFM++P+E+YVDD+ KLTLHGL Q+YIKL E EKNRKLN+LLD L+
Sbjct: 243 FSATLSQEIRPICKKFMRNPLEVYVDDDTKLTLHGLQQYYIKLDEKEKNRKLNELLDNLE 302
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
FNQV+IFVKS RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD+
Sbjct: 303 FNQVIIFVKSTQRANELDKLLRECNFPSIAVHSGVSQEERIKRYKEFKEFNKRICVATDV 362
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
GRGIDIER+N+ INYD+P AD+YLHRVGRAGRFGTKGL+I+FVS+ D +L ++ K
Sbjct: 363 FGRGIDIERINLAINYDLPADADSYLHRVGRAGRFGTKGLSISFVSNEDDEKVLKEIEK 421
>gi|367042132|ref|XP_003651446.1| hypothetical protein THITE_2111758 [Thielavia terrestris NRRL 8126]
gi|346998708|gb|AEO65110.1| hypothetical protein THITE_2111758 [Thielavia terrestris NRRL 8126]
Length = 434
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 274/410 (66%), Positives = 328/410 (80%), Gaps = 14/410 (3%)
Query: 10 EDELLDYEEEDAQAPDSVATKANGEAA----------KKG-YVGIHSSGFRDFLLKPELL 58
E++L+DY +++ D+ A ANG+ KKG YVGIHS+GFRDFLLKPELL
Sbjct: 4 EEDLIDYSDDELNN-DTAAAAANGKKGDAGAAGQNVDKKGSYVGIHSTGFRDFLLKPELL 62
Query: 59 RAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTAL 118
RAI D GFEHPSEVQ CIPQA+LG D+ICQAKSG+GKTAVFVL+TLQQ EP G+ + L
Sbjct: 63 RAIADCGFEHPSEVQQTCIPQAMLGGDIICQAKSGLGKTAVFVLTTLQQVEPVAGECSVL 122
Query: 119 VLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGR 176
V+CHTRELA+QI +E+ RFS Y+PDIK VFYGG I+ ++LKN+ P I+VGTPGR
Sbjct: 123 VMCHTRELAFQIRNEYNRFSKYMPDIKTGVFYGGTPIQKDAEILKNKETHPHIIVGTPGR 182
Query: 177 ILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEI 236
+ AL RDK+L L +VR F+LDECDKML+ +DMRRDVQEIF+ TP KQVMMFSATLS EI
Sbjct: 183 LNALVRDKNLRLGSVRMFVLDECDKMLDQIDMRRDVQEIFRATPQQKQVMMFSATLSDEI 242
Query: 237 RPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVK 296
+P+C+KFMQ+P E YVD++ KLTLHGL Q+YI L E EKNRKLN+LLD L FNQV+IFVK
Sbjct: 243 KPICRKFMQNPTEHYVDEDTKLTLHGLQQYYIPLEEREKNRKLNELLDELQFNQVIIFVK 302
Query: 297 SVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIER 356
S RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD+ GRGIDIER
Sbjct: 303 STLRATELDKLLRECNFPSIAVHSGVSQEERIRRYKEFKEFNKRICVATDVFGRGIDIER 362
Query: 357 VNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
+N+ INYDMP AD+YLHRVGRAGRFGTKGLAI+FV++ D D+L Q+ K
Sbjct: 363 INLAINYDMPADADSYLHRVGRAGRFGTKGLAISFVTTDQDKDVLQQIEK 412
>gi|115386676|ref|XP_001209879.1| ATP-dependent RNA helicase SUB2 [Aspergillus terreus NIH2624]
gi|121736209|sp|Q0CGJ9.1|SUB2_ASPTN RecName: Full=ATP-dependent RNA helicase sub2
gi|114190877|gb|EAU32577.1| ATP-dependent RNA helicase SUB2 [Aspergillus terreus NIH2624]
Length = 438
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 278/418 (66%), Positives = 332/418 (79%), Gaps = 23/418 (5%)
Query: 9 YEDELLDYEEEDAQAPDSVA-----------------TKANGEAAKKG-YVGIHSSGFRD 50
+E++L+DY +E+ Q D+ A T G + KKG YVGIHS+GFRD
Sbjct: 3 HEEDLIDYSDEELQTTDAAATTAAPAANGAPAKTGDLTVTGGRSDKKGSYVGIHSTGFRD 62
Query: 51 FLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEP 110
FLLK ELLRAI D GFEHPSEV CIP AIL +DV+CQAKSG+GKTAVFVL+TL Q EP
Sbjct: 63 FLLKGELLRAITDCGFEHPSEV---CIPTAILNVDVLCQAKSGLGKTAVFVLTTLHQLEP 119
Query: 111 NPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQ 168
PG+ + LV+CHTRELAYQI +E+ RFS YLPD+K AVFYGG I+ ++L N+ P
Sbjct: 120 VPGECSVLVMCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPIQKDIEVLSNKESYPN 179
Query: 169 IVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMF 228
IVVGTPGR+ AL R+K LSL+NV+ F+LDECDKML+ +DMRRDVQEIF+ TP DKQVMMF
Sbjct: 180 IVVGTPGRLNALVREKKLSLRNVKAFVLDECDKMLDQIDMRRDVQEIFRATPADKQVMMF 239
Query: 229 SATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDF 288
SATLS+EIRP+CKKFM++P+E+YVDD+ KLTLHGL Q+YIKLSE EKNRKLNDLLD L+F
Sbjct: 240 SATLSQEIRPICKKFMRNPLEVYVDDDTKLTLHGLQQYYIKLSESEKNRKLNDLLDNLEF 299
Query: 289 NQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLV 348
NQV+IFVKS RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD+
Sbjct: 300 NQVIIFVKSTQRANELDKLLRECNFPSIAVHSGVSQEERIKRYKEFKEFNKRICVATDVF 359
Query: 349 GRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
GRGIDIER+N+ INYD+P AD+YLHRVGRAGRFGTKGL+I+FVSS D +L + K
Sbjct: 360 GRGIDIERINLAINYDLPADADSYLHRVGRAGRFGTKGLSISFVSSEDDEKVLKDIEK 417
>gi|440912451|gb|ELR62017.1| ATP-dependent RNA helicase DDX39, partial [Bos grunniens mutus]
Length = 447
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 271/396 (68%), Positives = 316/396 (79%), Gaps = 34/396 (8%)
Query: 36 AKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMG 95
K YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAILGMD++CQAKSGMG
Sbjct: 34 VKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDILCQAKSGMG 93
Query: 96 KTAVFVLSTLQQTEPNPGQ---------------------------VTALVLCHTRELAY 128
KTAVFVL+TLQQ EP GQ VT LV+CHTRELA+
Sbjct: 94 KTAVFVLATLQQIEPVNGQGTSTRVGSGQGRTSDIALRVCAPPAPQVTVLVMCHTRELAF 153
Query: 129 QICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSL 188
QI E+ERFS Y+P +KV+VF+GG++IK +++LK CP +VVGTPGRILAL R++ L+L
Sbjct: 154 QISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKRNCPHVVVGTPGRILALVRNRSLNL 213
Query: 189 KNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPM 248
+NV+HF+LDECDKMLE LDMRRDVQEIF++TPH+KQ MMFSATLSKEIRPVC+KFMQDPM
Sbjct: 214 RNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPM 273
Query: 249 EIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLL 308
E++VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L +LL
Sbjct: 274 EVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLL 333
Query: 309 VECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDS 368
VE NFP+I IH RL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYDMP+
Sbjct: 334 VEQNFPAIAIH-------RLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPED 386
Query: 369 ADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
+DTYLHRV RAGRFGTKGLA+TFVS +D+ ILN V
Sbjct: 387 SDTYLHRVARAGRFGTKGLAVTFVSDENDAKILNDV 422
>gi|320162590|gb|EFW39489.1| nuclear RNA helicase [Capsaspora owczarzaki ATCC 30864]
Length = 433
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 276/407 (67%), Positives = 323/407 (79%), Gaps = 11/407 (2%)
Query: 8 EYEDELLDY-EEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGF 66
E E++L DY E+E+ PD+ K K G+VG+HS+GFRD +LKPELLRAI + GF
Sbjct: 12 ETEEDLPDYNEDEEIATPDATVKKD----VKGGHVGMHSAGFRDLMLKPELLRAITECGF 67
Query: 67 EHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTREL 126
EHPSEVQH CIPQA LG D+ICQAKSGMGKTAVFVLSTLQQ P G+V+ LVLCHTREL
Sbjct: 68 EHPSEVQHACIPQANLGSDIICQAKSGMGKTAVFVLSTLQQLVPTEGEVSVLVLCHTREL 127
Query: 127 AYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALAR---- 182
A+QI +EF+RF ++P IK VFYGG IK + L P +VVGTPGRILAL+
Sbjct: 128 AFQIKNEFDRFIKFMPTIKTDVFYGGTPIKQDETKLAAGTPNVVVGTPGRILALSTPDAS 187
Query: 183 -DKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCK 241
L+L +V+HF+LDECD+ML+ +DMR+DVQ+IF TPH KQVMMFSATL K +RP CK
Sbjct: 188 GKARLNLSHVKHFVLDECDRMLDQVDMRKDVQKIFIQTPHKKQVMMFSATLDKALRPTCK 247
Query: 242 KFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRA 301
KFM DPMEIYVDDE KLTLHGL Q+Y KL+E +KN+KLN LLDAL+FNQVVIFVKSV+RA
Sbjct: 248 KFMHDPMEIYVDDETKLTLHGLQQYYFKLTEQDKNKKLNALLDALEFNQVVIFVKSVNRA 307
Query: 302 AELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVI 361
EL KLLVECNFP+I IHS M Q+ER+ RY+ FK RILVATDL GRGIDIERVNIVI
Sbjct: 308 KELTKLLVECNFPAIAIHSAMPQDERIQRYQNFKNFQSRILVATDLFGRGIDIERVNIVI 367
Query: 362 NYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV-SKF 407
NYDMPDS+D+YLHRV RAGRFGTKGLA+TFVSS D+ IL+QV S+F
Sbjct: 368 NYDMPDSSDSYLHRVARAGRFGTKGLAVTFVSSEEDATILSQVQSRF 414
>gi|171684483|ref|XP_001907183.1| hypothetical protein [Podospora anserina S mat+]
gi|170942202|emb|CAP67854.1| unnamed protein product [Podospora anserina S mat+]
Length = 433
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 272/408 (66%), Positives = 326/408 (79%), Gaps = 11/408 (2%)
Query: 10 EDELLDYEE----EDAQAPDSVATKANGEAA----KKG-YVGIHSSGFRDFLLKPELLRA 60
E++L+DY + ++ AP S KA+ AA KKG YVGIHS+GFRDFLLKPELLRA
Sbjct: 4 EEDLIDYSDDELNQETTAPASNGKKADAAAAQNVDKKGSYVGIHSTGFRDFLLKPELLRA 63
Query: 61 IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVL 120
I D GFEHPSEVQ IPQA+LG D+ICQAKSG+GKTAVFVL+TLQQ EP G+ + LV+
Sbjct: 64 IADCGFEHPSEVQQTTIPQAMLGGDIICQAKSGLGKTAVFVLTTLQQVEPVAGECSVLVM 123
Query: 121 CHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRIL 178
CHTRELA+QI +E+ RFS Y+PDIK VFYGG I+ ++LKN+ P I+VGTPGR+
Sbjct: 124 CHTRELAFQIRNEYNRFSKYMPDIKTGVFYGGTPIQKDAEILKNKDTHPHIIVGTPGRLN 183
Query: 179 ALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRP 238
AL RDK L L +VR F+LDECDKML+ +DMRRDVQEIF+ TP KQVMMFSATLS EI+P
Sbjct: 184 ALVRDKHLRLGSVRMFVLDECDKMLDQIDMRRDVQEIFRATPQQKQVMMFSATLSDEIKP 243
Query: 239 VCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSV 298
+C+KFMQ+P E YVD++ KLTLHGL Q+Y+ L E EKNRKLN+LLD L FNQV+IFVKS
Sbjct: 244 ICRKFMQNPTEHYVDEDTKLTLHGLQQYYLALEEREKNRKLNELLDDLQFNQVIIFVKST 303
Query: 299 SRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVN 358
RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD+ GRGIDIER+N
Sbjct: 304 LRATELDKLLRECNFPSIAVHSGVSQEERIKRYKEFKEFNKRICVATDVFGRGIDIERIN 363
Query: 359 IVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
+ INYDMP AD+YLHRVGRAGRFGTKGLAI+FV++ D ++L + K
Sbjct: 364 LAINYDMPADADSYLHRVGRAGRFGTKGLAISFVTTEQDKEVLQAIEK 411
>gi|322701372|gb|EFY93122.1| ATP-dependent RNA helicase [Metarhizium acridum CQMa 102]
Length = 434
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 270/410 (65%), Positives = 326/410 (79%), Gaps = 12/410 (2%)
Query: 9 YEDELLDYEEEDAQAPDSVATKANGEAA---------KKG-YVGIHSSGFRDFLLKPELL 58
+E++L+DY +E+ A ++ A +NG+ KKG YVGIHS+GFRDFLLKPELL
Sbjct: 3 HEEDLIDYSDEEIGANETAAAGSNGKKGELAASNDVDKKGSYVGIHSTGFRDFLLKPELL 62
Query: 59 RAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTAL 118
RAI D GFEHPSEVQ CIPQA+LG D+ICQAKSG+GKTAVFVL+TLQQ EP G+V+ +
Sbjct: 63 RAIGDCGFEHPSEVQQTCIPQALLGGDIICQAKSGLGKTAVFVLATLQQVEPVNGEVSVV 122
Query: 119 VLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGR 176
V+CHTRELAYQI E+ RFS Y+PDIK VF+GG IK + LKN+ CP I+VGTPGR
Sbjct: 123 VMCHTRELAYQIRDEYNRFSKYMPDIKTGVFFGGTPIKTDMETLKNKDTCPHIIVGTPGR 182
Query: 177 ILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEI 236
+ AL RDK L L +VR F+LDECDKML+ DMR DVQ++F+ TP KQVMMFSATL+ EI
Sbjct: 183 LKALVRDKALRLGSVRIFVLDECDKMLDQPDMRTDVQDVFRATPTQKQVMMFSATLANEI 242
Query: 237 RPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVK 296
+P+C+KFMQ+P E YVD++ KLTLHGL Q+YIKL E EKNRKLN+LLD L FNQV+IFVK
Sbjct: 243 KPICRKFMQNPTEHYVDEDTKLTLHGLQQYYIKLEEKEKNRKLNELLDELQFNQVIIFVK 302
Query: 297 SVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIER 356
S RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE KRI VATD+ GRGIDIER
Sbjct: 303 STIRATELDKLLRECNFPSIAVHSGVSQEERIKRYKEFKEFKKRICVATDVFGRGIDIER 362
Query: 357 VNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
+N+ INYD+P A +YLHRVGRAGRFGTKGLAI+FVSS D ++L ++ K
Sbjct: 363 INLAINYDLPADASSYLHRVGRAGRFGTKGLAISFVSSDQDQEVLKEIEK 412
>gi|255951046|ref|XP_002566290.1| Pc22g24000 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211593307|emb|CAP99688.1| Pc22g24000 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 442
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 276/419 (65%), Positives = 332/419 (79%), Gaps = 21/419 (5%)
Query: 9 YEDELLDYEEEDAQAPDSVATKA-----NGEAAKKG--------------YVGIHSSGFR 49
+E++L+DY +E+ Q + AT A NG+A K+G YVGIHS+GFR
Sbjct: 3 HEEDLIDYSDEELQTTTAPATTAAPAATNGDADKQGDLTVTGGRPDKKGSYVGIHSTGFR 62
Query: 50 DFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTE 109
DFLLK ELLRAI D GFEHPSEVQ CIP +IL +DV+CQAKSG+GKTAVFVL+TL Q E
Sbjct: 63 DFLLKGELLRAITDCGFEHPSEVQQVCIPTSILNVDVLCQAKSGLGKTAVFVLTTLHQLE 122
Query: 110 PNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CP 167
P PG+ LV+CHTRELAYQI +E+ RFS YLPD+K AVFYGG I+ ++L N+ P
Sbjct: 123 PVPGECQILVMCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPIQKDVEILSNKETHP 182
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
IVV TPGR+ AL RDK LSL+NV+ F+LDECDKML+ +DMRRDVQEIF+ TP DKQVMM
Sbjct: 183 NIVVATPGRLNALVRDKKLSLRNVKAFVLDECDKMLDQIDMRRDVQEIFRATPADKQVMM 242
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSATLS+EIRP+CKKFM +P+E+YVDD+ KLTLHGL Q+YIKL E EKNRKLN+LLD L+
Sbjct: 243 FSATLSQEIRPICKKFMHNPLEVYVDDDTKLTLHGLQQYYIKLDEKEKNRKLNELLDNLE 302
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
FNQV+IFVKS RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD+
Sbjct: 303 FNQVIIFVKSTQRANELDKLLRECNFPSIAVHSGVSQEERIKRYKEFKEFNKRICVATDV 362
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
GRGIDIER+N+ INYD+P AD+YLHRVGRAGRFGTKGL+I+FVS+ D +L ++ K
Sbjct: 363 FGRGIDIERINLAINYDLPADADSYLHRVGRAGRFGTKGLSISFVSNEDDEKVLKEIEK 421
>gi|429853298|gb|ELA28379.1| ATP-dependent RNA helicase [Colletotrichum gloeosporioides Nara
gc5]
Length = 434
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 272/409 (66%), Positives = 327/409 (79%), Gaps = 12/409 (2%)
Query: 10 EDELLDYEEEDAQAPDSVATKANGEAA---------KKG-YVGIHSSGFRDFLLKPELLR 59
E++L+DY +E+ Q ++ A +A KKG YVGIHS+GFRDFLLKPELLR
Sbjct: 4 EEDLIDYSDEELQTNETAAASNGKKADAAAAGNNVDKKGSYVGIHSTGFRDFLLKPELLR 63
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
AI D GFEHPSEVQ CIPQA+LG D+ICQAKSG+GKTAVFVL+TLQQ EP G+V+ LV
Sbjct: 64 AIGDCGFEHPSEVQQTCIPQALLGGDIICQAKSGLGKTAVFVLTTLQQVEPVQGEVSVLV 123
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRI 177
+CHTRELA+QI +E+ RFS Y+PDIK VFYGG I+ + +KN+ CP I+VGTPGR+
Sbjct: 124 MCHTRELAFQIRNEYNRFSKYMPDIKTGVFYGGTPIQKDVETIKNKETCPHIIVGTPGRL 183
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
AL RDK L L +VR F+LDECDKML+ +DMRRDVQEIF+ TP KQVMMFSATLS +I+
Sbjct: 184 NALVRDKVLRLGSVRIFVLDECDKMLDQIDMRRDVQEIFRATPTQKQVMMFSATLSDDIK 243
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 297
P+C+KFMQ+P E YVD++ KLTLHGL Q+YIKL E EKNRKLN+LLD L FNQV+IFVKS
Sbjct: 244 PICRKFMQNPTEHYVDEDTKLTLHGLQQYYIKLEEREKNRKLNELLDELQFNQVIIFVKS 303
Query: 298 VSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERV 357
RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD+ GRGIDIER+
Sbjct: 304 TLRATELDKLLRECNFPSIAVHSGVSQEERIRRYKEFKEFNKRICVATDVFGRGIDIERI 363
Query: 358 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
N+ INYD+P AD+YLHRVGRAGRFGTKGLAI+FVS+ D ++L + K
Sbjct: 364 NLAINYDLPADADSYLHRVGRAGRFGTKGLAISFVSTDQDKEVLTAIEK 412
>gi|67970471|dbj|BAE01578.1| unnamed protein product [Macaca fascicularis]
Length = 424
Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust.
Identities = 263/345 (76%), Positives = 303/345 (87%)
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
AIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV
Sbjct: 55 AIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLV 114
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA 179
+CHTRELA+QI E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRILA
Sbjct: 115 MCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILA 174
Query: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
LAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIRPV
Sbjct: 175 LARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPV 234
Query: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 299
C+KFMQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV
Sbjct: 235 CRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQ 294
Query: 300 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNI 359
R L +LLVE NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNI
Sbjct: 295 RCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNI 354
Query: 360 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN V
Sbjct: 355 AFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDV 399
>gi|389646607|ref|XP_003720935.1| ATP-dependent RNA helicase SUB2 [Magnaporthe oryzae 70-15]
gi|152112305|sp|A4RBS3.1|SUB2_MAGO7 RecName: Full=ATP-dependent RNA helicase SUB2
gi|351638327|gb|EHA46192.1| ATP-dependent RNA helicase SUB2 [Magnaporthe oryzae 70-15]
Length = 436
Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust.
Identities = 275/415 (66%), Positives = 326/415 (78%), Gaps = 7/415 (1%)
Query: 8 EYEDELLDYEEEDAQAPDSVATK----ANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIV 62
+Y DE L+ E A A DS K A G KKG YVGIHS+GFRDFLLKPELLRAI
Sbjct: 9 DYSDEELNTNETAAPAADSNGKKGELAAGGNVDKKGSYVGIHSTGFRDFLLKPELLRAIG 68
Query: 63 DSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCH 122
D GFEHPSEVQ CIPQA+LG D+ICQAKSG+GKTAVFVL+TLQQ EP G+ + LV+CH
Sbjct: 69 DCGFEHPSEVQQTCIPQAMLGGDIICQAKSGLGKTAVFVLTTLQQVEPVAGECSVLVMCH 128
Query: 123 TRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILAL 180
TRELA+QI +E+ RFS Y+PDIK VF+GG I+ +LLKN+ P I+VGTPGR+ AL
Sbjct: 129 TRELAFQIRNEYNRFSKYMPDIKTGVFFGGTPIQKDAELLKNKETHPHIIVGTPGRLNAL 188
Query: 181 ARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
RDK L L +VR F+LDECDKML+ +DMRRDVQEIF+ TP KQVMMFSATLS EI+P+C
Sbjct: 189 VRDKFLRLSSVRIFVLDECDKMLDQIDMRRDVQEIFRATPQQKQVMMFSATLSDEIKPIC 248
Query: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSR 300
KKFMQ+P E YVD++ KLTLHGL Q+++ L E EKNRKLN+LLD L FNQV+IFVKS R
Sbjct: 249 KKFMQNPTEHYVDEDTKLTLHGLQQYFVALEEKEKNRKLNELLDDLQFNQVIIFVKSTLR 308
Query: 301 AAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIV 360
A EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD+ GRGIDIER+N+
Sbjct: 309 ATELDKLLRECNFPSIAVHSGVSQEERIRRYKEFKEFNKRICVATDVFGRGIDIERINLA 368
Query: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKFMFLLIGSF 415
INYDMP AD+YLHRVGRAGRFGTKGLA++FV++ D ++L + K + I F
Sbjct: 369 INYDMPADADSYLHRVGRAGRFGTKGLAVSFVTNDQDKEVLTAIEKRFEVPIPEF 423
>gi|443925691|gb|ELU44467.1| ATP-dependent RNA helicase SUB2 [Rhizoctonia solani AG-1 IA]
Length = 1773
Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust.
Identities = 279/451 (61%), Positives = 332/451 (73%), Gaps = 53/451 (11%)
Query: 7 NEYEDELLDYEEE-----DAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAI 61
N+ E+EL+DYE++ A + A A+GE KK Y +H++GFRDFLLKPELLRAI
Sbjct: 5 NQPEEELIDYEDDHDVSLTTGANGAAAAPADGEKEKKAYTNVHTTGFRDFLLKPELLRAI 64
Query: 62 VDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLC 121
D GFEHPSEVQ ECIPQA+LGMDV+CQAKSG GKTAVFVL+TLQQ EP G+V+ +VLC
Sbjct: 65 SDLGFEHPSEVQQECIPQAVLGMDVLCQAKSGHGKTAVFVLATLQQLEPVDGEVSVIVLC 124
Query: 122 HTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILA 179
HTRELAYQI +E+ RFS Y+PD++ V +GG + +LLK++ CP I+V TPGR+ A
Sbjct: 125 HTRELAYQIRNEYTRFSRYMPDVRTGVVFGGTPVAKDIELLKDKTKCPHIIVATPGRLNA 184
Query: 180 LARDKDLSLKNVRHFILDECDKMLESL--------------------------------- 206
LARDK L K V+HF+LDECDKMLE L
Sbjct: 185 LARDKHLDPKKVKHFVLDECDKMLEQLAPIGGNPFDWSFYALQCVDDAATNLDSIDAVNY 244
Query: 207 -------------DMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVD 253
MRRDVQEIF++TPH KQVMMFSATLSK+IR CKKFM +P+EI++D
Sbjct: 245 IDALSLEQGLKHIHMRRDVQEIFRVTPHHKQVMMFSATLSKDIRVTCKKFMANPLEIFID 304
Query: 254 DEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNF 313
DE+KLTLHGL QHYI L E+ KNRKLNDLLD L+FNQVVIFVKSVSRA ELNKLL CNF
Sbjct: 305 DESKLTLHGLQQHYINLEEVAKNRKLNDLLDQLEFNQVVIFVKSVSRANELNKLLNSCNF 364
Query: 314 PSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYL 373
PSICIHSG++QEER+ RY+ FK KRILVATD+ GRGID+ERVNIV+NYD P AD+YL
Sbjct: 365 PSICIHSGLNQEERINRYQSFKSFEKRILVATDIFGRGIDVERVNIVVNYDAPSEADSYL 424
Query: 374 HRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
HRVGRAGRFGTKGLAITFVSS +D+++L Q+
Sbjct: 425 HRVGRAGRFGTKGLAITFVSSPADTEVLQQI 455
>gi|116193535|ref|XP_001222580.1| ATP-dependent RNA helicase [Chaetomium globosum CBS 148.51]
gi|118577976|sp|Q2H4D0.1|SUB2_CHAGB RecName: Full=ATP-dependent RNA helicase SUB2
gi|88182398|gb|EAQ89866.1| ATP-dependent RNA helicase [Chaetomium globosum CBS 148.51]
Length = 434
Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust.
Identities = 272/419 (64%), Positives = 330/419 (78%), Gaps = 14/419 (3%)
Query: 10 EDELLDYEEEDAQAPDSVATKANGEAA----------KKG-YVGIHSSGFRDFLLKPELL 58
E++L+DY +++ ++ A +NG+ KKG YVGIHS+GFRDFLLKPELL
Sbjct: 4 EEDLIDYSDDELNN-ETTAPASNGKKGDAAAAAQNVDKKGSYVGIHSTGFRDFLLKPELL 62
Query: 59 RAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTAL 118
RAI D GFEHPSEVQ CIPQA+LG D+ICQAKSG+GKTAVFVL+TLQQ EP G+ + L
Sbjct: 63 RAIADCGFEHPSEVQQTCIPQAMLGGDIICQAKSGLGKTAVFVLTTLQQVEPVAGECSVL 122
Query: 119 VLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGR 176
V+CHTRELA+QI +E+ RFS Y+PDIK VFYGG I+ ++LKN+ P I+VGTPGR
Sbjct: 123 VMCHTRELAFQIRNEYNRFSKYMPDIKTGVFYGGTPIQKDAEVLKNKETHPHIIVGTPGR 182
Query: 177 ILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEI 236
+ AL RDK L L NVR F+LDECDKML+ +DMRRDVQEIF+ TP KQVMMFSATL+ EI
Sbjct: 183 LNALVRDKHLRLGNVRMFVLDECDKMLDQIDMRRDVQEIFRATPQQKQVMMFSATLADEI 242
Query: 237 RPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVK 296
+P+C+KFMQ+P E YVD++ KLTLHGL Q+YI L E EKNRKLN+LLD L FNQV+IFVK
Sbjct: 243 KPICRKFMQNPTEHYVDEDTKLTLHGLQQYYIPLEEREKNRKLNELLDELQFNQVIIFVK 302
Query: 297 SVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIER 356
S RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD+ GRGIDIER
Sbjct: 303 STIRATELDKLLRECNFPSIAVHSGVSQEERIRRYKEFKEFNKRICVATDVFGRGIDIER 362
Query: 357 VNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKFMFLLIGSF 415
+N+ INYD+P AD+YLHRVGRAGRFGTKGLAI+FV+S D ++L Q+ K + + F
Sbjct: 363 INLAINYDLPADADSYLHRVGRAGRFGTKGLAISFVNSDQDKEVLQQIEKRFEVALPEF 421
>gi|157115837|ref|XP_001658306.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|94468806|gb|ABF18252.1| ATP-dependent RNA helicase [Aedes aegypti]
gi|108883476|gb|EAT47701.1| AAEL001216-PA [Aedes aegypti]
Length = 423
Score = 560 bits (1442), Expect = e-157, Method: Compositional matrix adjust.
Identities = 274/370 (74%), Positives = 316/370 (85%)
Query: 36 AKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMG 95
K YV IHSSGFRDFLLKPE+LRAIVD GFEHPSEVQHECIPQA+LGMD++CQAKSGMG
Sbjct: 31 VKGTYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMG 90
Query: 96 KTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNI 155
KTAVFVL+TLQQ EP LV+CHTRELA+QI E+ERFS Y+P+IKVAVF+GG+ I
Sbjct: 91 KTAVFVLATLQQLEPTENVPYVLVMCHTRELAFQISKEYERFSKYMPNIKVAVFFGGLPI 150
Query: 156 KIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEI 215
+ +++LK+ P I+VGTPGR+LAL R+K L+LK+++HFILDECDKMLE LDMRRDVQEI
Sbjct: 151 QKDEEVLKSTNPHIIVGTPGRVLALIRNKKLNLKHLKHFILDECDKMLEQLDMRRDVQEI 210
Query: 216 FKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEK 275
F+ TPH KQVMMFSATLSKEIRPVCKKFMQDPME+YVDDE KLTLHGL QHY+KL E EK
Sbjct: 211 FRNTPHGKQVMMFSATLSKEIRPVCKKFMQDPMEVYVDDETKLTLHGLQQHYVKLKENEK 270
Query: 276 NRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFK 335
N+KL +LLD L+FNQVVIFVKSV R L +LL E NFP+I IH GM QEERL+RY+ FK
Sbjct: 271 NKKLFELLDVLEFNQVVIFVKSVQRCMALAQLLTEQNFPAIGIHRGMVQEERLSRYQQFK 330
Query: 336 EGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSA 395
+ KRILVAT+L GRG+DIERVNIV NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS
Sbjct: 331 DFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDE 390
Query: 396 SDSDILNQVS 405
+D+ ILN+V
Sbjct: 391 TDAKILNEVQ 400
>gi|122937741|gb|ABM68586.1| AAEL001216-PA [Aedes aegypti]
Length = 419
Score = 560 bits (1442), Expect = e-157, Method: Compositional matrix adjust.
Identities = 274/370 (74%), Positives = 316/370 (85%)
Query: 36 AKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMG 95
K YV IHSSGFRDFLLKPE+LRAIVD GFEHPSEVQHECIPQA+LGMD++CQAKSGMG
Sbjct: 31 VKGTYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMG 90
Query: 96 KTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNI 155
KTAVFVL+TLQQ EP LV+CHTRELA+QI E+ERFS Y+P+IKVAVF+GG+ I
Sbjct: 91 KTAVFVLATLQQLEPTENVPYVLVMCHTRELAFQISKEYERFSKYMPNIKVAVFFGGLPI 150
Query: 156 KIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEI 215
+ +++LK+ P I+VGTPGR+LAL R+K L+LK+++HFILDECDKMLE LDMRRDVQEI
Sbjct: 151 QKDEEVLKSTNPHIIVGTPGRVLALIRNKKLNLKHLKHFILDECDKMLEQLDMRRDVQEI 210
Query: 216 FKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEK 275
F+ TPH KQVMMFSATLSKEIRPVCKKFMQDPME+YVDDE KLTLHGL QHY+KL E EK
Sbjct: 211 FRNTPHGKQVMMFSATLSKEIRPVCKKFMQDPMEVYVDDETKLTLHGLQQHYVKLKENEK 270
Query: 276 NRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFK 335
N+KL +LLD L+FNQVVIFVKSV R L +LL E NFP+I IH GM QEERL+RY+ FK
Sbjct: 271 NKKLFELLDVLEFNQVVIFVKSVQRCMALAQLLTEQNFPAIGIHRGMVQEERLSRYQQFK 330
Query: 336 EGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSA 395
+ KRILVAT+L GRG+DIERVNIV NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS
Sbjct: 331 DFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDE 390
Query: 396 SDSDILNQVS 405
+D+ ILN+V
Sbjct: 391 TDAKILNEVQ 400
>gi|358332904|dbj|GAA43229.2| ATP-dependent RNA helicase UAP56/SUB2 [Clonorchis sinensis]
Length = 426
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 271/402 (67%), Positives = 324/402 (80%), Gaps = 8/402 (1%)
Query: 10 EDELLDYEEEDAQAPDSVATKANGEA-AKKG----YVGIHSSGFRDFLLKPELLRAIVDS 64
E ELLDYE+E+ + T+ NGEA AKKG YV IHSSGFRDF+LKPELLRAIVD
Sbjct: 4 ESELLDYEDEEQETVQE--TRPNGEAPAKKGVKGAYVTIHSSGFRDFILKPELLRAIVDC 61
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNP-GQVTALVLCHT 123
GFEHPSEVQHECIPQAIL MDV+CQAKSGMGKTAVFV++TLQQ +P + LVLCHT
Sbjct: 62 GFEHPSEVQHECIPQAILSMDVLCQAKSGMGKTAVFVIATLQQLDPEEEANTSVLVLCHT 121
Query: 124 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARD 183
RELA+QI E+ERFS Y+P IKV VF+GG+ I+ + L IVVGTPGRIL L R+
Sbjct: 122 RELAFQISKEYERFSKYMPKIKVGVFFGGLPIRKDIETLSKSPVHIVVGTPGRILDLIRN 181
Query: 184 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF 243
+ L L++V+HFI+DECDKML+ LDMRRD+QEIF+MTPH KQVMMFSAT+SKEIRPVC+ F
Sbjct: 182 QALKLQHVKHFIIDECDKMLDMLDMRRDIQEIFRMTPHQKQVMMFSATMSKEIRPVCRNF 241
Query: 244 MQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAE 303
MQDP+EI++++++KLTLHGL QHY+K+ E EKNRKL +LLD L FNQV+IFVKSV R
Sbjct: 242 MQDPLEIFIENDSKLTLHGLRQHYVKVKENEKNRKLFELLDELQFNQVIIFVKSVQRCIA 301
Query: 304 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 363
L +LLV+ NFP+I +H M+QEERL RY+ FK KR+LVAT+L GRG+DIERVNIV NY
Sbjct: 302 LAQLLVDQNFPAIAMHRQMTQEERLERYQAFKNFQKRLLVATNLFGRGMDIERVNIVFNY 361
Query: 364 DMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVS 405
DMP+ +DTYLHRV RAGRFGTKGLAITF+S D+ +LN V
Sbjct: 362 DMPEDSDTYLHRVARAGRFGTKGLAITFISDEVDAKVLNDVQ 403
>gi|70984615|ref|XP_747814.1| ATP dependent RNA helicase (Sub2) [Aspergillus fumigatus Af293]
gi|74667372|sp|Q4WCW2.1|SUB2_ASPFU RecName: Full=ATP-dependent RNA helicase sub2
gi|66845441|gb|EAL85776.1| ATP dependent RNA helicase (Sub2), putative [Aspergillus fumigatus
Af293]
gi|159122596|gb|EDP47717.1| ATP dependent RNA helicase (Sub2), putative [Aspergillus fumigatus
A1163]
Length = 448
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 276/425 (64%), Positives = 332/425 (78%), Gaps = 27/425 (6%)
Query: 9 YEDELLDYEEED-----------------AQAPDSVATKANGEAAKKG-YVGIHSSGFRD 50
+E++L+DY +E+ AQ T + G KKG YVGIHS+GFRD
Sbjct: 3 HEEDLIDYSDEELQTTDAAATTAAPAANGAQDKKGDLTVSGGRPDKKGSYVGIHSTGFRD 62
Query: 51 FLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEP 110
FLLK ELLRAI D GFEHPSEVQ CIP AIL +DV+CQAKSG+GKTAVFVL+TL Q EP
Sbjct: 63 FLLKGELLRAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTLHQLEP 122
Query: 111 NPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQ 168
PG+ + LV+CHTRELAYQI +E+ RFS YLPD+K AVFYGG I+ ++L N+ P
Sbjct: 123 VPGECSVLVMCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPIQKDIEVLSNKESYPN 182
Query: 169 IVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLD-------MRRDVQEIFKMTPH 221
IVVGTPGR+ AL R+K LSL+NV+ F+LDECDKML+ + MRRDVQEIF+ TP
Sbjct: 183 IVVGTPGRLNALVREKKLSLRNVKAFVLDECDKMLDQIGKQAQIAHMRRDVQEIFRATPA 242
Query: 222 DKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLND 281
DKQVMMFSATLS+EIRP+CKKFM++P+E+YVDD+ KLTLHGL Q+YIKLSE EKNRKLN+
Sbjct: 243 DKQVMMFSATLSQEIRPICKKFMRNPLEVYVDDDTKLTLHGLQQYYIKLSESEKNRKLNE 302
Query: 282 LLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRI 341
LLD+L+FNQV+IFVKS RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE NKRI
Sbjct: 303 LLDSLEFNQVIIFVKSTLRANELDKLLRECNFPSIAVHSGVSQEERIKRYKEFKEFNKRI 362
Query: 342 LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDIL 401
VATD+ GRGIDIER+N+ INYD+P AD+YLHRVGRAGRFGTKGL+I+FVSS D +L
Sbjct: 363 CVATDVFGRGIDIERINLAINYDLPADADSYLHRVGRAGRFGTKGLSISFVSSEEDEKVL 422
Query: 402 NQVSK 406
++ K
Sbjct: 423 KEIEK 427
>gi|302918633|ref|XP_003052696.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256733636|gb|EEU46983.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 434
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 267/410 (65%), Positives = 326/410 (79%), Gaps = 12/410 (2%)
Query: 9 YEDELLDYEEEDAQAPDSVATKANGEAA---------KKG-YVGIHSSGFRDFLLKPELL 58
+E++L+DY +E+ ++ AT +NG+ KKG YVGIHS+GFRDFLLK ELL
Sbjct: 3 HEEDLIDYSDEEIGGNETAATTSNGKKGELAAGNNVDKKGSYVGIHSTGFRDFLLKAELL 62
Query: 59 RAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTAL 118
RAI D GFEHPSEVQ CIPQA+LG D+ICQAKSG+GKTAVFVL+TLQQ EP G+V+ +
Sbjct: 63 RAIADCGFEHPSEVQQTCIPQALLGGDIICQAKSGLGKTAVFVLATLQQVEPVNGEVSVV 122
Query: 119 VLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGR 176
V+CHTRELAYQI E+ RFS Y+PDIK VFYGG IK + LKN+ CP I+VGTPGR
Sbjct: 123 VMCHTRELAYQIRDEYNRFSKYMPDIKTGVFYGGTPIKTDVETLKNKETCPHIIVGTPGR 182
Query: 177 ILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEI 236
+ AL RDK L L +VR F+LDECDKML+ DMR DVQ++F+ TP KQVMMFSATLS+E+
Sbjct: 183 LKALVRDKALRLGSVRIFVLDECDKMLDQPDMRTDVQDVFRATPQQKQVMMFSATLSEEV 242
Query: 237 RPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVK 296
+P+C+KFMQ+P E YVD++ KLTLHGL Q+YIKL E EKNRKLN+LLD L FNQV+IFV+
Sbjct: 243 KPICRKFMQNPTEHYVDEDTKLTLHGLQQYYIKLEEKEKNRKLNELLDDLQFNQVIIFVR 302
Query: 297 SVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIER 356
S RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE KRI VATD+ GRGIDIER
Sbjct: 303 STVRATELDKLLRECNFPSIAVHSGVSQEERIRRYKEFKEFKKRICVATDVFGRGIDIER 362
Query: 357 VNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
+N+ INYD+ + A +YLHRVGRAGRFGTKGLAI+FVS+ D ++L ++ K
Sbjct: 363 INLAINYDLSNDASSYLHRVGRAGRFGTKGLAISFVSTDQDQEVLKEIEK 412
>gi|442753421|gb|JAA68870.1| Putative atp-dependent rna helicase [Ixodes ricinus]
Length = 418
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 269/366 (73%), Positives = 313/366 (85%)
Query: 39 GYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTA 98
GYV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAILGMD++CQAKSGMGKTA
Sbjct: 32 GYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTA 91
Query: 99 VFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIH 158
VFVL+TLQQ +P GQV+ LV+CHTRELA+QI E+ERFS YLP ++V VF+GG+NI
Sbjct: 92 VFVLATLQQLDPVDGQVSVLVMCHTRELAFQISKEYERFSKYLPSVRVGVFFGGMNISND 151
Query: 159 KDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKM 218
+ LLK+ CP +VV PGR LAL R + L LK+++HF+LDECDKMLE LDMRRDVQEIF+
Sbjct: 152 EKLLKSSCPHVVVAPPGRALALVRSRKLQLKHIKHFVLDECDKMLEQLDMRRDVQEIFRN 211
Query: 219 TPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRK 278
TPH+KQVMMFSATLSK+IRPVC KFMQDPME+YVDDEAKLTLHGL Q+Y+KL + EKNRK
Sbjct: 212 TPHEKQVMMFSATLSKDIRPVCLKFMQDPMEVYVDDEAKLTLHGLQQYYVKLKDNEKNRK 271
Query: 279 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGN 338
L +LLD L+FNQVVIFVK+V R L +LLVE NFP+I IH M+QEERL+RY+ FK+
Sbjct: 272 LFELLDLLEFNQVVIFVKTVQRCMALAQLLVEQNFPAIAIHRAMTQEERLSRYQQFKDFQ 331
Query: 339 KRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDS 398
KRILVAT+L GRG+DIERVNIV NYDMP+ +DTYLHRV RAGRFGTKGLA+T VS +D+
Sbjct: 332 KRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAVTXVSDETDA 391
Query: 399 DILNQV 404
LN+V
Sbjct: 392 KTLNEV 397
>gi|408388400|gb|EKJ68085.1| hypothetical protein FPSE_11685 [Fusarium pseudograminearum CS3096]
Length = 434
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 267/410 (65%), Positives = 326/410 (79%), Gaps = 12/410 (2%)
Query: 9 YEDELLDYEEEDAQAPDSVATKANGEAA---------KKG-YVGIHSSGFRDFLLKPELL 58
+E++L+DY +E+ ++ AT +NG+ KKG YVGIHS+GFRDFLLK ELL
Sbjct: 3 HEEDLIDYSDEEIGGNETAATASNGKKGELAAGNNVDKKGSYVGIHSTGFRDFLLKAELL 62
Query: 59 RAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTAL 118
RAI D GFEHPSEVQ CIPQA+LG D+ICQAKSG+GKTAVFVL+TLQQ EP G+V+ +
Sbjct: 63 RAIADCGFEHPSEVQQTCIPQALLGGDIICQAKSGLGKTAVFVLATLQQVEPVNGEVSVV 122
Query: 119 VLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGR 176
V+CHTRELAYQI E+ RFS Y+PDIK VFYGG IK + LKN+ CP I+VGTPGR
Sbjct: 123 VMCHTRELAYQIRDEYNRFSKYMPDIKTGVFYGGTPIKTDVETLKNKETCPHIIVGTPGR 182
Query: 177 ILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEI 236
+ AL RDK L L +VR F+LDECDKML+ DMR DVQ++F+ TP KQVMMFSATLS+E+
Sbjct: 183 LKALVRDKALRLGSVRIFVLDECDKMLDQPDMRTDVQDVFRATPQQKQVMMFSATLSEEV 242
Query: 237 RPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVK 296
+P+C+KFMQ+P E YVD++ KLTLHGL Q+YIKL E EKNRKLN+LLD L FNQV+IFV+
Sbjct: 243 KPICRKFMQNPTEHYVDEDTKLTLHGLQQYYIKLEEKEKNRKLNELLDDLQFNQVIIFVR 302
Query: 297 SVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIER 356
S RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE KRI VATD+ GRGIDIER
Sbjct: 303 STVRATELDKLLRECNFPSIAVHSGVSQEERIRRYKEFKEFKKRICVATDVFGRGIDIER 362
Query: 357 VNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
+N+ INYD+ + A +YLHRVGRAGRFGTKGLAI+FVS+ D ++L ++ K
Sbjct: 363 INLAINYDLSNDASSYLHRVGRAGRFGTKGLAISFVSTDQDQEVLKEIEK 412
>gi|440636017|gb|ELR05936.1| ATP-dependent RNA helicase sub2 [Geomyces destructans 20631-21]
Length = 439
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 270/414 (65%), Positives = 328/414 (79%), Gaps = 17/414 (4%)
Query: 10 EDELLDYEEEDAQAPDSV--ATKANGEAA------------KKG-YVGIHSSGFRDFLLK 54
E++L+DY +++ + + A NGEA KKG YVGIH++GFRDFLLK
Sbjct: 4 EEDLIDYSDDELETKTTAPAAGAGNGEAKEGDLTVSGGNPDKKGSYVGIHATGFRDFLLK 63
Query: 55 PELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQ 114
PELLRAI D GFEHPSEVQ CIPQAILG DV+CQAKSG+GKTAVFVL+TLQQ EP G+
Sbjct: 64 PELLRAITDCGFEHPSEVQQVCIPQAILGTDVLCQAKSGLGKTAVFVLTTLQQVEPVSGE 123
Query: 115 VTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVG 172
+ LV+CHTRELAYQI +E+ RFS Y+P++K AVFYGG I+ ++LKN+ P I+V
Sbjct: 124 CSVLVMCHTRELAYQIKNEYARFSKYMPEVKTAVFYGGTPIQKDAEILKNKDTHPHIIVA 183
Query: 173 TPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATL 232
TPGR+ AL RDK L L +V+ F+LDECDKML+ +DMRRDVQEIF+ TP KQVMMFSATL
Sbjct: 184 TPGRLNALVRDKHLRLGSVKVFVLDECDKMLDQIDMRRDVQEIFRATPTQKQVMMFSATL 243
Query: 233 SKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVV 292
S+E+RP+CKKFMQ+P+EIYVDD+ KLTLHGL Q+YIKL E EKNRKLN+LLD + FNQV+
Sbjct: 244 SQEVRPICKKFMQNPLEIYVDDDTKLTLHGLQQYYIKLDEKEKNRKLNELLDDMQFNQVI 303
Query: 293 IFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGI 352
IFVKS RA EL+KLL ECNFPSI +HSG+SQEER+ RY FKE NKRI VATD+ GRGI
Sbjct: 304 IFVKSTLRATELDKLLRECNFPSIAVHSGVSQEERIKRYTEFKEFNKRICVATDVFGRGI 363
Query: 353 DIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
DIER+N+ INYD+P AD+YLHRVGRAGRFG+KG++I+FVSS D +L + K
Sbjct: 364 DIERINLAINYDLPGDADSYLHRVGRAGRFGSKGVSISFVSSEPDQQVLKDIEK 417
>gi|339521897|gb|AEJ84113.1| spliceosome RNA helicase Bat1 [Capra hircus]
Length = 428
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 273/405 (67%), Positives = 326/405 (80%), Gaps = 10/405 (2%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAA------KKGYVGIHSSGFRDFLLKPELLR 59
+N+ ++ELLDYE+++ + A A+G A + +V IHSSGF DF KPE LR
Sbjct: 3 ENDVDNELLDYEDDEVET----AAGADGAEAPAMKDVQASFVPIHSSGFPDFRPKPEWLR 58
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
AIVD GFE PSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQ EP GQV+ LV
Sbjct: 59 AIVDCGFEPPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQHWEPVTGQVSVLV 118
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA 179
+CHTRELA+QI E+ERF Y+P +KVAVF+G ++IK +++LK CP IVVG+PGRILA
Sbjct: 119 MCHTRELAFQISKEYERFLKYMPSVKVAVFFGVLSIKKDEEVLKKNCPHIVVGSPGRILA 178
Query: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
LAR+K L+LK+++HFILDECDKML+ LDMRRDVQEIF+M PH+KQ MMFSA LSKEIRPV
Sbjct: 179 LARNKSLNLKHIKHFILDECDKMLQQLDMRRDVQEIFRMPPHEKQGMMFSAPLSKEIRPV 238
Query: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 299
C+K MQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKS
Sbjct: 239 CRKSMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSGQ 298
Query: 300 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNI 359
R L +LLVE N P+I IH GM QEERL+R + FK+ +RILVAT+L GRG+DIERVNI
Sbjct: 299 RCIALAQLLVEQNSPAIAIHRGMPQEERLSRSQQFKDFQRRILVATNLFGRGMDIERVNI 358
Query: 360 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
NYDMP+ +D YLHRV RAGRFGTKGLAITF+S +D+ ILN V
Sbjct: 359 AFNYDMPEYSDPYLHRVARAGRFGTKGLAITFMSDENDAKILNDV 403
>gi|395837044|ref|XP_003791455.1| PREDICTED: ATP-dependent RNA helicase DDX39A-like [Otolemur
garnettii]
Length = 444
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 268/400 (67%), Positives = 321/400 (80%), Gaps = 1/400 (0%)
Query: 6 DNEYEDELLDYEE-EDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDS 64
+ ++EL DYEE E+ QAP + K YV IHSSGFRDFLLKPELLRAIVD
Sbjct: 20 EQHVKNELSDYEEDEELQAPPESTPAPPKKDVKGSYVCIHSSGFRDFLLKPELLRAIVDC 79
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFEHPSEVQHECIPQAILG+DV+CQA+SGMGKTAVFVL+TLQQ EP GQVT LV+CHTR
Sbjct: 80 GFEHPSEVQHECIPQAILGLDVLCQARSGMGKTAVFVLATLQQIEPINGQVTVLVMCHTR 139
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDK 184
ELA+QI E+E FS Y+P +KV+VF+GG++I+ + +LK CP +VVGTPGRILAL R++
Sbjct: 140 ELAFQISKEYEGFSKYMPSVKVSVFFGGLSIRKDEKVLKKNCPHVVVGTPGRILALVRNR 199
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 244
L+LKNV+HF+LDECDKMLE DMRR V EIF++TP +KQ MMFSATLS+EIRPVC+KFM
Sbjct: 200 SLNLKNVKHFVLDECDKMLERPDMRRHVWEIFRLTPREKQCMMFSATLSQEIRPVCRKFM 259
Query: 245 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 304
QDPME++ DDE KLTL GL Q Y+KL EKNRKL+DLL+ L+F+QVVIFV S+ R L
Sbjct: 260 QDPMEVFADDEIKLTLRGLQQFYVKLRGSEKNRKLSDLLEVLEFDQVVIFVTSMQRCMAL 319
Query: 305 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 364
+LLV NFP++ IH GM+QEER +RY+ FK +RILVATDL GRG+DIE V+IV NYD
Sbjct: 320 AQLLVGQNFPAVAIHRGMAQEERRSRYQQFKGFQQRILVATDLFGRGMDIEPVDIVFNYD 379
Query: 365 MPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
MP+ +DTYLHRV RAGRFGTKGLA TFVS +D+ IL V
Sbjct: 380 MPEDSDTYLHRVARAGRFGTKGLAFTFVSDENDAKILKDV 419
>gi|164423323|ref|XP_964893.2| ATP-dependent RNA helicase [Neurospora crassa OR74A]
gi|157070045|gb|EAA35657.2| ATP-dependent RNA helicase [Neurospora crassa OR74A]
Length = 434
Score = 556 bits (1434), Expect = e-156, Method: Compositional matrix adjust.
Identities = 269/418 (64%), Positives = 327/418 (78%), Gaps = 12/418 (2%)
Query: 10 EDELLDYEEE----DAQAP------DSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLR 59
E++L+DY ++ D+ AP ++V + K YVGIHS+GFRDFLLKPELLR
Sbjct: 4 EEDLIDYSDDELNNDSAAPTNGKKAEAVPAGQTVDTKKGSYVGIHSTGFRDFLLKPELLR 63
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
AI D GFEHPSEVQ CIPQA+LG D+ICQAKSG+GKTAVFVL+TLQQ EP G+ + LV
Sbjct: 64 AIADCGFEHPSEVQQTCIPQAMLGGDIICQAKSGLGKTAVFVLTTLQQVEPVAGECSVLV 123
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRI 177
+CHTRELA+QI +E+ RFS Y+PDIK VFYGG I+ ++LKN+ P I+VGTPGR+
Sbjct: 124 MCHTRELAFQIRNEYNRFSKYMPDIKTGVFYGGTPIQKDAEVLKNKETHPHIIVGTPGRL 183
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
AL RDK L L +VR F+LDECDKML+ +DMRRDVQEIF+ TP KQVMMFSATLS EI+
Sbjct: 184 NALVRDKHLRLGSVRMFVLDECDKMLDQIDMRRDVQEIFRATPQQKQVMMFSATLSDEIK 243
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 297
P+C+KFMQ+P E YVD++ KLTLHGL Q+YI L E EKNRKLN+LLD L FNQV+IFVKS
Sbjct: 244 PICRKFMQNPTEHYVDEDTKLTLHGLQQYYIPLEEREKNRKLNELLDELQFNQVIIFVKS 303
Query: 298 VSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERV 357
RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD+ GRGIDIER+
Sbjct: 304 TLRATELDKLLRECNFPSIAVHSGVSQEERIRRYKEFKEFNKRICVATDVFGRGIDIERI 363
Query: 358 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKFMFLLIGSF 415
N+ INYD+P AD+YLHRVGRAGRFGTKGLAI+FV++ D ++L + K + + F
Sbjct: 364 NLAINYDLPADADSYLHRVGRAGRFGTKGLAISFVTTDQDKEVLKAIEKRFEVALPEF 421
>gi|336264515|ref|XP_003347034.1| hypothetical protein SMAC_05233 [Sordaria macrospora k-hell]
gi|380093114|emb|CCC09351.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 434
Score = 556 bits (1434), Expect = e-156, Method: Compositional matrix adjust.
Identities = 271/420 (64%), Positives = 328/420 (78%), Gaps = 16/420 (3%)
Query: 10 EDELLDYEEEDAQAPDSVATKANGEAA-----------KKG-YVGIHSSGFRDFLLKPEL 57
E++L+DY +++ + A NG+ A KKG YVGIHS+GFRDFLLKPEL
Sbjct: 4 EEDLIDYSDDELN--NESAAPTNGKKAEAVPAGQTVDTKKGSYVGIHSTGFRDFLLKPEL 61
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA 117
LRAI D GFEHPSEVQ CIPQA+LG D+ICQAKSG+GKTAVFVL+TLQQ EP G+ +
Sbjct: 62 LRAIADCGFEHPSEVQQTCIPQAMLGGDIICQAKSGLGKTAVFVLTTLQQVEPVAGECSV 121
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPG 175
LV+CHTRELA+QI +E+ RFS Y+PDIK VFYGG I+ ++LKN+ P I+VGTPG
Sbjct: 122 LVMCHTRELAFQIRNEYNRFSKYMPDIKTGVFYGGTPIQKDAEILKNKETHPHIIVGTPG 181
Query: 176 RILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKE 235
R+ AL RDK L L +VR F+LDECDKML+ +DMRRDVQEIF+ TP KQVMMFSATLS E
Sbjct: 182 RLNALVRDKHLRLGSVRMFVLDECDKMLDQIDMRRDVQEIFRATPQQKQVMMFSATLSDE 241
Query: 236 IRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFV 295
I+P+C+KFMQ+P E YVD++ KLTLHGL Q+YI L E EKNRKLN+LLD L FNQV+IFV
Sbjct: 242 IKPICRKFMQNPTEHYVDEDTKLTLHGLQQYYIPLEEREKNRKLNELLDELQFNQVIIFV 301
Query: 296 KSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIE 355
KS RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD+ GRGIDIE
Sbjct: 302 KSTLRATELDKLLRECNFPSIAVHSGVSQEERIRRYKEFKEFNKRICVATDVFGRGIDIE 361
Query: 356 RVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKFMFLLIGSF 415
R+N+ INYD+P AD+YLHRVGRAGRFGTKGLAI+FV++ D ++L + K + + F
Sbjct: 362 RINLAINYDLPADADSYLHRVGRAGRFGTKGLAISFVTTDQDKEVLKAIEKRFEVALPEF 421
>gi|170057076|ref|XP_001864320.1| ATP-dependent RNA helicase WM6 [Culex quinquefasciatus]
gi|167876642|gb|EDS40025.1| ATP-dependent RNA helicase WM6 [Culex quinquefasciatus]
Length = 423
Score = 556 bits (1433), Expect = e-156, Method: Compositional matrix adjust.
Identities = 273/370 (73%), Positives = 314/370 (84%)
Query: 36 AKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMG 95
K YV IHSSGFRDFLLKPE+LRAIVD GFEHPSEVQHECIPQA+LGMD++CQAKSGMG
Sbjct: 31 VKGTYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMG 90
Query: 96 KTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNI 155
KTAVFVL+TLQQ EP LV+CHTRELA+QI E+ERFS Y+P IKVAVF+GG+ I
Sbjct: 91 KTAVFVLATLQQLEPTESVPYVLVMCHTRELAFQISKEYERFSKYMPSIKVAVFFGGLPI 150
Query: 156 KIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEI 215
+ +++LK+ P I+VGTPGR+LAL R+K L+LK+++HFILDECDKMLE LDMRRDVQEI
Sbjct: 151 QKDEEVLKSTNPHIIVGTPGRVLALIRNKKLNLKHLKHFILDECDKMLEQLDMRRDVQEI 210
Query: 216 FKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEK 275
F+ TPH KQVMMFSATLSK+IRPVCKKFMQDPME+YVDDE KLTLHGL QHY+KL E EK
Sbjct: 211 FRNTPHGKQVMMFSATLSKDIRPVCKKFMQDPMEVYVDDETKLTLHGLQQHYVKLKENEK 270
Query: 276 NRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFK 335
N+KL +LLD L+FNQVVIFVKSV R L +LL E NFP+I IH GM QEERL+RY+ FK
Sbjct: 271 NKKLFELLDVLEFNQVVIFVKSVQRCMALAQLLTEQNFPAIGIHRGMVQEERLSRYQQFK 330
Query: 336 EGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSA 395
+ KRILVAT+L GRG+DIERVNIV NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS
Sbjct: 331 DFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDE 390
Query: 396 SDSDILNQVS 405
D+ ILN+V
Sbjct: 391 GDAKILNEVQ 400
>gi|330790076|ref|XP_003283124.1| DEAD/DEAH box helicase [Dictyostelium purpureum]
gi|325086991|gb|EGC40373.1| DEAD/DEAH box helicase [Dictyostelium purpureum]
Length = 426
Score = 556 bits (1433), Expect = e-156, Method: Compositional matrix adjust.
Identities = 268/409 (65%), Positives = 325/409 (79%), Gaps = 2/409 (0%)
Query: 1 MGETRDNEYEDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRA 60
M ET EL +YEE D + + +AK +V +HSSGFR+FLLKPEL R
Sbjct: 1 MAETNPEVDISELAEYEESDEEVQNDAGDAKKNISAKDTHVAMHSSGFREFLLKPELERV 60
Query: 61 IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVL 120
I D GFEHPSEVQ+ECIPQAILG D+ICQAKSGMGKTAVFV+STLQQ + NP VT LVL
Sbjct: 61 IGDCGFEHPSEVQNECIPQAILGSDLICQAKSGMGKTAVFVISTLQQLDNNPSGVTTLVL 120
Query: 121 CHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILAL 180
CHTRELAYQIC E++RF+ YLP+IK AV YGG+ ++ HKDLLK + P IV+GTPGRIL L
Sbjct: 121 CHTRELAYQICDEYDRFTKYLPNIKTAVIYGGIPVQTHKDLLKEKKPNIVIGTPGRILQL 180
Query: 181 ARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
A++ LSLK ++ F+LDECD +LESLDMR+DVQ IFK+ P +KQVMMFSATLS +RPVC
Sbjct: 181 AKEGALSLKEIKQFVLDECDSLLESLDMRKDVQMIFKLIPPNKQVMMFSATLSDTVRPVC 240
Query: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSR 300
KKFM +P+EIY++D +KLTLHGL Q+Y+++ E +KN+KL DLLDALDFNQ VIFVKSV R
Sbjct: 241 KKFMSNPLEIYINDGSKLTLHGLQQYYVEIKEDQKNKKLIDLLDALDFNQAVIFVKSVPR 300
Query: 301 AAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIV 360
AA LNK+L + FPSICIH +SQ ER+ +Y+ FK RI+VAT++ GRGIDIERVN+V
Sbjct: 301 AAALNKILQDIGFPSICIHRDLSQPERIEQYRKFKNFESRIMVATNIFGRGIDIERVNVV 360
Query: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV-SKFM 408
INYDM +SADTYLHRVGRAGRFGTKGLAI+FV S D ++L QV S+F+
Sbjct: 361 INYDMAESADTYLHRVGRAGRFGTKGLAISFVPS-KDDEVLTQVQSRFV 408
>gi|336463284|gb|EGO51524.1| ATP-dependent RNA helicase [Neurospora tetrasperma FGSC 2508]
gi|350297513|gb|EGZ78490.1| ATP-dependent RNA helicase [Neurospora tetrasperma FGSC 2509]
Length = 434
Score = 556 bits (1432), Expect = e-156, Method: Compositional matrix adjust.
Identities = 271/420 (64%), Positives = 328/420 (78%), Gaps = 16/420 (3%)
Query: 10 EDELLDYEEEDAQAPDSVATKANGEAA-----------KKG-YVGIHSSGFRDFLLKPEL 57
E++L+DY +++ + A NG+ A KKG YVGIHS+GFRDFLLKPEL
Sbjct: 4 EEDLIDYSDDELN--NESAAPTNGKKAEAVPAGQTVDTKKGSYVGIHSTGFRDFLLKPEL 61
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA 117
LRAI D GFEHPSEVQ CIPQA+LG D+ICQAKSG+GKTAVFVL+TLQQ EP G+ +
Sbjct: 62 LRAIADCGFEHPSEVQQTCIPQAMLGGDIICQAKSGLGKTAVFVLTTLQQVEPVAGECSV 121
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPG 175
LV+CHTRELA+QI +E+ RFS Y+PDIK VFYGG I+ ++LKN+ P I+VGTPG
Sbjct: 122 LVMCHTRELAFQIRNEYNRFSKYMPDIKTGVFYGGTPIQKDAEVLKNKETHPHIIVGTPG 181
Query: 176 RILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKE 235
R+ AL RDK L L +VR F+LDECDKML+ +DMRRDVQEIF+ TP KQVMMFSATLS E
Sbjct: 182 RLNALVRDKHLRLGSVRMFVLDECDKMLDQIDMRRDVQEIFRATPQQKQVMMFSATLSDE 241
Query: 236 IRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFV 295
I+P+C+KFMQ+P E YVD++ KLTLHGL Q+YI L E EKNRKLN+LLD L FNQV+IFV
Sbjct: 242 IKPICRKFMQNPTEHYVDEDTKLTLHGLQQYYIPLEEREKNRKLNELLDELQFNQVIIFV 301
Query: 296 KSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIE 355
KS RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD+ GRGIDIE
Sbjct: 302 KSTLRATELDKLLRECNFPSIAVHSGVSQEERIRRYKEFKEFNKRICVATDVFGRGIDIE 361
Query: 356 RVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKFMFLLIGSF 415
R+N+ INYD+P AD+YLHRVGRAGRFGTKGLAI+FV++ D ++L + K + + F
Sbjct: 362 RINLAINYDLPADADSYLHRVGRAGRFGTKGLAISFVTTDQDKEVLKAIEKRFEVALPEF 421
>gi|327309270|ref|XP_003239326.1| ATP-dependent RNA helicase SUB2 [Trichophyton rubrum CBS 118892]
gi|326459582|gb|EGD85035.1| ATP-dependent RNA helicase SUB2 [Trichophyton rubrum CBS 118892]
Length = 441
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 271/417 (64%), Positives = 327/417 (78%), Gaps = 20/417 (4%)
Query: 10 EDELLDYEEEDAQAPDSVATKA----NGEAAKKG--------------YVGIHSSGFRDF 51
E++L+DY +E+ Q D+ A A NG+A+KKG YVGIHS+GFRDF
Sbjct: 4 EEDLIDYSDEELQTTDAAAAPAAPAANGDASKKGDLTVGGAGADKKGSYVGIHSTGFRDF 63
Query: 52 LLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPN 111
LK ELLRAI D GFEHPSEVQ CIP AIL +DV+CQAKSG+GKTAVF L+TL Q EP
Sbjct: 64 YLKAELLRAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFALTTLHQLEPV 123
Query: 112 PGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL--KNECPQI 169
PG + LV+C TRELAYQI E+ RFS Y+PD+K AVFYGG I+ ++L K+ P I
Sbjct: 124 PGTCSILVMCPTRELAYQIKDEYARFSKYMPDVKTAVFYGGTPIQKDIEILSSKDTHPNI 183
Query: 170 VVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFS 229
+VGTPGR+ AL RDK LSL+N++ F+LDECDKML+ DMR DVQEIF+ TP DKQVMMFS
Sbjct: 184 IVGTPGRLNALLRDKKLSLRNIKSFVLDECDKMLDQKDMRADVQEIFRSTPADKQVMMFS 243
Query: 230 ATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFN 289
ATL++EIRP+CKKFM++P+E+YVDD+ KLTLHGL Q+YIKLSE EKNRKLN+LLD L+FN
Sbjct: 244 ATLAQEIRPICKKFMRNPLEVYVDDDTKLTLHGLQQYYIKLSEAEKNRKLNELLDNLEFN 303
Query: 290 QVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVG 349
QV+IFVKS RA EL+KLL ECNFPSI +HSG+SQEER+ RY+ FKE NKRI VATD+ G
Sbjct: 304 QVIIFVKSTVRATELDKLLRECNFPSIAVHSGVSQEERIKRYREFKEFNKRICVATDVFG 363
Query: 350 RGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
RGIDIER+N+ INYDMP AD+YLHRVGRAGRFGTKGL+I+FVS + +L + K
Sbjct: 364 RGIDIERINLAINYDMPIDADSYLHRVGRAGRFGTKGLSISFVSDEENMQVLKDIEK 420
>gi|317575817|ref|NP_001187807.1| spliceosome RNA helicase bat1 [Ictalurus punctatus]
gi|308324021|gb|ADO29146.1| spliceosome RNA helicase bat1 [Ictalurus punctatus]
Length = 426
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 267/400 (66%), Positives = 318/400 (79%), Gaps = 4/400 (1%)
Query: 10 EDELLDY---EEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGF 66
E+ELLDY E+E Q P S +A K YV +HSSGFRDF+LKPE+LRAIVD GF
Sbjct: 4 ENELLDYDEDEQETVQEPKSNGELQVKKAVKGDYVTVHSSGFRDFILKPEVLRAIVDCGF 63
Query: 67 EHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNP-GQVTALVLCHTRE 125
EHPSEVQHECIPQAIL MDV+CQAKSGMGKTAVFV++TLQQ +P G LVLCHTRE
Sbjct: 64 EHPSEVQHECIPQAILSMDVLCQAKSGMGKTAVFVIATLQQLDPEEEGMTRVLVLCHTRE 123
Query: 126 LAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKD 185
LAYQI E+ERFS Y+P IKV VF+GG+ ++ + P IVVGTPGRIL L R+K
Sbjct: 124 LAYQISKEYERFSKYMPKIKVGVFFGGMPLRRDIESFGKGAPHIVVGTPGRILDLIRNKA 183
Query: 186 LSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQ 245
L L N++HFI+DECDKML++LDMRRDVQ+IF+ TP KQVMMFSAT+SK+IRPVC+ FMQ
Sbjct: 184 LKLDNIKHFIIDECDKMLDTLDMRRDVQDIFRQTPRSKQVMMFSATMSKDIRPVCRNFMQ 243
Query: 246 DPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELN 305
DP+EI++D+++KLTLHGL QHY+K+ E EKNRKL +LLD L FNQV+IFVKSV R L
Sbjct: 244 DPLEIFIDNDSKLTLHGLRQHYVKVKENEKNRKLFELLDELQFNQVIIFVKSVQRCIALC 303
Query: 306 KLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDM 365
+LLV+ NFP+I +H MSQEERL RY+ FK KR+LVAT+L GRG+DIERVNIV NYDM
Sbjct: 304 QLLVDQNFPAIAMHRSMSQEERLERYQAFKNFQKRLLVATNLFGRGMDIERVNIVFNYDM 363
Query: 366 PDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVS 405
P+ +DTYLHRV RAGRFGTKGLAITF+S D++ILN V
Sbjct: 364 PEDSDTYLHRVARAGRFGTKGLAITFISDEHDAEILNDVQ 403
>gi|294954356|ref|XP_002788127.1| helicase, putative [Perkinsus marinus ATCC 50983]
gi|239903342|gb|EER19923.1| helicase, putative [Perkinsus marinus ATCC 50983]
Length = 485
Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust.
Identities = 274/416 (65%), Positives = 324/416 (77%), Gaps = 10/416 (2%)
Query: 10 EDELLDYEEEDAQAPDSVATKA---NGEAA----KKG-YVGIHSSGFRDFLLKPELLRAI 61
ED+LLDY+E D + D+ A GE A KKG YVGIH++GFRDFLLKPELLRAI
Sbjct: 6 EDQLLDYDEGDEEVEDTSAVNGKAVGGEIAADGQKKGNYVGIHATGFRDFLLKPELLRAI 65
Query: 62 VDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ--TEPNPGQVTALV 119
VD GFEHPSEVQHE IPQAILG D++CQAKSGMGKTAVFVL+ LQQ + V L+
Sbjct: 66 VDCGFEHPSEVQHEAIPQAILGTDILCQAKSGMGKTAVFVLAILQQLNIDEKDTDVKVLI 125
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA 179
+CHTRELAYQI +EF+RFS Y P++K V YGGV I K++L PQI++GTPGR+LA
Sbjct: 126 MCHTRELAYQIKNEFDRFSKYFPNVKNGVVYGGVPISEDKEMLSKSHPQILIGTPGRVLA 185
Query: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
L R K L L +V HF+LDECDK L+ LDMR+D+Q +F TP KQVMMFSAT+SKE+R V
Sbjct: 186 LVRGKHLDLSHVEHFVLDECDKCLDKLDMRKDIQSVFMETPVKKQVMMFSATMSKEMREV 245
Query: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 299
CK+FM +P EI+VDD+ KLTLHGL Q++++L+E EKN+KL DLLDAL+FNQVVIFVKSV
Sbjct: 246 CKRFMNEPHEIFVDDDTKLTLHGLQQYFVRLAENEKNKKLTDLLDALEFNQVVIFVKSVQ 305
Query: 300 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNI 359
RA L LL ECNFP+I IHS + Q ER+ RYK FK+ KRI+VATDL GRGIDIERVNI
Sbjct: 306 RAMALADLLTECNFPAIAIHSRLKQSERIDRYKQFKDFKKRIMVATDLFGRGIDIERVNI 365
Query: 360 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKFMFLLIGSF 415
VINYD+PDS+D YLHRVGRAGRFGTKGLAITFVSS D+D+LNQV + IG
Sbjct: 366 VINYDIPDSSDQYLHRVGRAGRFGTKGLAITFVSSEEDTDMLNQVQARFEVTIGEL 421
>gi|358384845|gb|EHK22442.1| hypothetical protein TRIVIDRAFT_84043 [Trichoderma virens Gv29-8]
Length = 433
Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust.
Identities = 272/418 (65%), Positives = 328/418 (78%), Gaps = 11/418 (2%)
Query: 9 YEDELLDYEEEDAQAPDSVATK--ANGEAA------KKG-YVGIHSSGFRDFLLKPELLR 59
+E++L+DY +E+ A ++ A GEAA KKG YVGIHS+GFRDFLLKPELLR
Sbjct: 3 HEEDLIDYSDEEIGANEAAAPSNGKKGEAAAGNNVDKKGSYVGIHSTGFRDFLLKPELLR 62
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
AI D GFEHPSEVQ CIPQA+LG D+ICQAKSG+GKTAVFVL+TLQQ EP G+V+ +V
Sbjct: 63 AIGDCGFEHPSEVQQTCIPQALLGGDIICQAKSGLGKTAVFVLATLQQVEPVNGEVSVVV 122
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRI 177
+CHTRELAYQI E+ RFS Y+PDIK VFYGG IK + LK++ CP I+VGTPGR+
Sbjct: 123 MCHTRELAYQIRDEYNRFSKYMPDIKTGVFYGGTPIKNDVETLKSKDTCPHIIVGTPGRL 182
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
AL RDK L L +VR F+LDECDKML+ DMR DVQ++F+ TP KQVMMFSATLS I+
Sbjct: 183 KALVRDKALRLGSVRIFVLDECDKMLDQPDMRTDVQDVFRATPQQKQVMMFSATLSDAIK 242
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 297
P+C+KFMQ+P E YVD++ KLTLHGL Q+YIKL E EKNRKLN+LLD L FNQV+IFVKS
Sbjct: 243 PICRKFMQNPTEHYVDEDTKLTLHGLQQYYIKLEEREKNRKLNELLDDLQFNQVIIFVKS 302
Query: 298 VSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERV 357
RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE KRI VATD+ GRGIDIER+
Sbjct: 303 TVRATELDKLLRECNFPSIAVHSGVSQEERIRRYKEFKEFKKRICVATDVFGRGIDIERI 362
Query: 358 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKFMFLLIGSF 415
N+ INYD+ + A +YLHRVGRAGRFGTKGLAI+FVSS D ++L ++ K + + F
Sbjct: 363 NLAINYDLSNDASSYLHRVGRAGRFGTKGLAISFVSSEQDQEVLKEIEKRFEVALPEF 420
>gi|340521389|gb|EGR51623.1| predicted protein [Trichoderma reesei QM6a]
Length = 433
Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust.
Identities = 269/418 (64%), Positives = 325/418 (77%), Gaps = 11/418 (2%)
Query: 9 YEDELLDYEEEDAQAPDSVA--------TKANGEAAKKG-YVGIHSSGFRDFLLKPELLR 59
+E++L+DY +E+ A ++ A T A KKG YVGIHS+GFRDFLLKPELLR
Sbjct: 3 HEEDLIDYSDEEIGANETAAASNGKKGETTAATNVDKKGSYVGIHSTGFRDFLLKPELLR 62
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
AI D GFEHPSE CIPQA+LG D+ICQAKSG+GKTAVFVL+TLQQ EP G+V+ +V
Sbjct: 63 AIGDCGFEHPSEASQTCIPQALLGGDIICQAKSGLGKTAVFVLATLQQVEPVNGEVSVVV 122
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRI 177
+CHTRELAYQI E+ RFS Y+PDIK VFYGG IK + LKN+ CP I+VGTPGR+
Sbjct: 123 MCHTRELAYQIRDEYNRFSKYMPDIKTGVFYGGTPIKNDVETLKNKDTCPHIIVGTPGRL 182
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
AL RDK L L +VR F+LDECDKML+ DMR DVQ++F+ TP KQVMMFSATLS I+
Sbjct: 183 KALVRDKALRLGSVRIFVLDECDKMLDQPDMRTDVQDVFRATPQQKQVMMFSATLSDAIK 242
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 297
P+C+KFMQ+P E YVD++ KLTLHGL Q+YIKL E EKNRKLN+LLD L FNQV+IFVKS
Sbjct: 243 PICRKFMQNPTEHYVDEDTKLTLHGLQQYYIKLEEREKNRKLNELLDDLQFNQVIIFVKS 302
Query: 298 VSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERV 357
RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE KRI VATD+ GRGIDIER+
Sbjct: 303 TVRATELDKLLRECNFPSIAVHSGVSQEERIRRYKEFKEFKKRICVATDVFGRGIDIERI 362
Query: 358 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKFMFLLIGSF 415
N+ INYD+P A++YLHRVGRAGRFGTKGLAI+FVS+ D ++L ++ K + + F
Sbjct: 363 NLAINYDLPGDANSYLHRVGRAGRFGTKGLAISFVSTEQDQEVLKEIEKRFEVALPEF 420
>gi|242809318|ref|XP_002485344.1| ATP dependent RNA helicase (Sub2), putative [Talaromyces stipitatus
ATCC 10500]
gi|218715969|gb|EED15391.1| ATP dependent RNA helicase (Sub2), putative [Talaromyces stipitatus
ATCC 10500]
Length = 444
Score = 553 bits (1424), Expect = e-155, Method: Compositional matrix adjust.
Identities = 271/420 (64%), Positives = 329/420 (78%), Gaps = 23/420 (5%)
Query: 10 EDELLDYEEEDAQ--------------APDSVATK------ANGEAAKKG-YVGIHSSGF 48
E++L+DY +E+ Q + ATK + G KKG YVGIHS+GF
Sbjct: 4 EEDLIDYSDEELQTTEPAAVAPAATEAGNGAAATKKGDLTVSGGRPDKKGSYVGIHSTGF 63
Query: 49 RDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQT 108
RDFLLK ELLRAI D GFEHPSEVQ CIPQ +L D++CQAKSG+GKTAVFVL+TL
Sbjct: 64 RDFLLKTELLRAITDCGFEHPSEVQQVCIPQGMLHSDLLCQAKSGLGKTAVFVLTTLHGL 123
Query: 109 EPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--C 166
+P G+V LV+CHTRELAYQI +E+ RFS YLP +K AVFYGG ++ ++L N+
Sbjct: 124 DPVEGEVQVLVMCHTRELAYQIKNEYARFSKYLPQVKTAVFYGGTPMQKDIEILSNKETR 183
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
P IVVGTPGR+ AL RDK LSL+NV+ F+LDECDKML+ +DMRRDVQEIF+ TP +KQVM
Sbjct: 184 PNIVVGTPGRLNALVRDKKLSLRNVKAFVLDECDKMLDQIDMRRDVQEIFRNTPAEKQVM 243
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
MFSATLS+E+RP+CKKFM++P+E+YVDD+ KLTLHGL Q+YIKLSE EKNRKL+DLLD L
Sbjct: 244 MFSATLSQEVRPICKKFMRNPLEVYVDDDTKLTLHGLQQYYIKLSEQEKNRKLSDLLDNL 303
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
+FNQV+IFVKS RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD
Sbjct: 304 EFNQVIIFVKSTLRANELDKLLRECNFPSIAVHSGVSQEERIKRYKEFKEFNKRICVATD 363
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
+ GRGIDIER+N+ INYD+P AD+YLHRVGRAGRFGTKGL+I+FVSS D +L ++ K
Sbjct: 364 VFGRGIDIERINLAINYDLPGDADSYLHRVGRAGRFGTKGLSISFVSSEEDEKVLKEIEK 423
>gi|441628856|ref|XP_003275725.2| PREDICTED: ATP-dependent RNA helicase DDX39A [Nomascus leucogenys]
Length = 424
Score = 553 bits (1424), Expect = e-155, Method: Compositional matrix adjust.
Identities = 274/401 (68%), Positives = 320/401 (79%), Gaps = 6/401 (1%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDS 64
+ + E++LLDY+EE+ +T A + KG YV IHSSGFRDFLLKPELLRAIVD
Sbjct: 3 EQDVENDLLDYDEEEEPQAPQESTPAPPKKDIKGSYVSIHSSGFRDFLLKPELLRAIVDC 62
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQVT LV+CHTR
Sbjct: 63 GFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTR 122
Query: 125 ELAYQICHEFERFSTYLPDIKVAVF-YGGVNIKIHKDLLKNECPQIVVGTPGRILALARD 183
ELA+QI E+ERFS Y+P +KV+ + G L C RILAL R+
Sbjct: 123 ELAFQISKEYERFSKYMPSVKVSPSGWTGPGAAWFLQL----CXXXXXXXXXRILALVRN 178
Query: 184 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF 243
+ SLKNV+HF+LDECDKMLE LDMRRDVQEIF++TPH+KQ MMFSATLSK+IRPVC+KF
Sbjct: 179 RSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCRKF 238
Query: 244 MQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAE 303
MQDPME++VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQV+IFVKSV R
Sbjct: 239 MQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVIIFVKSVQRCMA 298
Query: 304 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 363
L +LLVE NFP+I IH GM+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NY
Sbjct: 299 LAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNY 358
Query: 364 DMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
DMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN V
Sbjct: 359 DMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDV 399
>gi|225561088|gb|EEH09369.1| ATP-dependent RNA helicase SUB2 [Ajellomyces capsulatus G186AR]
gi|240280352|gb|EER43856.1| ATP-dependent RNA helicase SUB2 [Ajellomyces capsulatus H143]
gi|325096576|gb|EGC49886.1| ATP-dependent RNA helicase SUB2 [Ajellomyces capsulatus H88]
Length = 477
Score = 552 bits (1423), Expect = e-155, Method: Compositional matrix adjust.
Identities = 278/454 (61%), Positives = 337/454 (74%), Gaps = 56/454 (12%)
Query: 9 YEDELLDYEEEDAQAPDSVA------------------TKANGEAAKKG-YVGIHSSGFR 49
+E++L+DY +E+ QA D+ A T + A KKG YVGIHS+GFR
Sbjct: 3 HEEDLIDYSDEELQATDAAAGTAAAGANGAAPKKEGDLTVSGARADKKGSYVGIHSTGFR 62
Query: 50 DFLLKPELLRAIVDSGFEHPSEV-----------------------------------QH 74
DFLLK ELLRAI D GFEHPSEV Q
Sbjct: 63 DFLLKGELLRAITDCGFEHPSEVSALGTATRRKRGYSINGWQYSAAWHNYLSILVIFVQQ 122
Query: 75 ECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEF 134
CIP AIL +DV+CQAKSG+GKTAVFVL+TL Q EP PG+ + LV+CHTRELAYQI +E+
Sbjct: 123 VCIPTAILNVDVLCQAKSGLGKTAVFVLTTLHQLEPVPGECSILVMCHTRELAYQIKNEY 182
Query: 135 ERFSTYLPDIKVAVFYGGVNIKIHKDLL--KNECPQIVVGTPGRILALARDKDLSLKNVR 192
RFS YLPD+K AVFYGG ++ +LL K+ P IVVGTPGR+ AL RDK LSL+N++
Sbjct: 183 ARFSKYLPDVKTAVFYGGTPMQKDIELLSSKDTYPSIVVGTPGRLNALVRDKKLSLRNIK 242
Query: 193 HFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYV 252
F+LDECDKML+ +DMRRDVQEIF+ TP DKQVMMFSATLS+E+RP+CKKFM++P+E+YV
Sbjct: 243 AFVLDECDKMLDQIDMRRDVQEIFRATPADKQVMMFSATLSQEVRPICKKFMRNPLEVYV 302
Query: 253 DDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECN 312
DD+ KLTLHGL+Q+YIKL E EKNRKLN+LLD+L+FNQV+IFVKS RA+EL+KLL ECN
Sbjct: 303 DDDTKLTLHGLLQYYIKLGESEKNRKLNELLDSLEFNQVIIFVKSTQRASELDKLLRECN 362
Query: 313 FPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTY 372
FPSI +HSG+SQEER+ RYK FKE NKRI VATD+ GRGIDIER+N+ INYD+P AD+Y
Sbjct: 363 FPSIAVHSGVSQEERIKRYKEFKEFNKRICVATDVFGRGIDIERINLAINYDLPADADSY 422
Query: 373 LHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
LHRVGRAGRFGTKGLAI+FVSS D ++L + K
Sbjct: 423 LHRVGRAGRFGTKGLAISFVSSEQDQEVLKDIEK 456
>gi|315053519|ref|XP_003176133.1| ATP-dependent RNA helicase SUB2 [Arthroderma gypseum CBS 118893]
gi|311337979|gb|EFQ97181.1| ATP-dependent RNA helicase SUB2 [Arthroderma gypseum CBS 118893]
Length = 441
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 270/417 (64%), Positives = 326/417 (78%), Gaps = 20/417 (4%)
Query: 10 EDELLDYEEEDAQAPDSVATKA----NGEAAKKG--------------YVGIHSSGFRDF 51
E++L+DY +E+ Q D+ A A NG+A+KKG YVGIHS+GFRDF
Sbjct: 4 EEDLIDYSDEELQTTDAAAVPAAPAANGDASKKGDLTVAGAGADKKGSYVGIHSTGFRDF 63
Query: 52 LLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPN 111
LK ELLRAI D GFEHPSEVQ CIP AIL +DV+CQAKSG+GKTAVF L+TL Q EP
Sbjct: 64 YLKAELLRAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFALTTLHQLEPV 123
Query: 112 PGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL--KNECPQI 169
PG + LV+C TRELAYQI E+ RFS Y+PD+K AVFYGG I+ ++L K P I
Sbjct: 124 PGTCSILVMCPTRELAYQIKDEYARFSKYMPDVKTAVFYGGTPIQKDIEILSSKETHPNI 183
Query: 170 VVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFS 229
+VGTPGR+ AL RDK LSL+N++ F+LDECDKML+ DMR DVQEIF+ TP +KQVMMFS
Sbjct: 184 IVGTPGRLNALLRDKKLSLRNIKSFVLDECDKMLDQKDMRADVQEIFRSTPSEKQVMMFS 243
Query: 230 ATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFN 289
ATL++EIRPVCKKFM++P+E+YVDD+ KLTLHGL Q+YIKLSE EKNRKLN+LLD L+FN
Sbjct: 244 ATLAQEIRPVCKKFMRNPLEVYVDDDTKLTLHGLQQYYIKLSEAEKNRKLNELLDNLEFN 303
Query: 290 QVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVG 349
QV+IFVKS RA EL+KLL ECNFPSI +HSG+SQEER+ RY+ FK+ NKRI VATD+ G
Sbjct: 304 QVIIFVKSTVRATELDKLLRECNFPSIAVHSGVSQEERIKRYREFKDFNKRICVATDVFG 363
Query: 350 RGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
RGIDIER+N+ INYDMP AD+YLHRVGRAGRFGTKGL+I+FVS + +L + K
Sbjct: 364 RGIDIERINLAINYDMPIDADSYLHRVGRAGRFGTKGLSISFVSDEENMQVLKDIEK 420
>gi|294882024|ref|XP_002769569.1| helicase, putative [Perkinsus marinus ATCC 50983]
gi|239873121|gb|EER02287.1| helicase, putative [Perkinsus marinus ATCC 50983]
Length = 439
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 272/416 (65%), Positives = 324/416 (77%), Gaps = 10/416 (2%)
Query: 10 EDELLDYEEEDAQAPDSVATKAN---GEAA----KKG-YVGIHSSGFRDFLLKPELLRAI 61
ED+LLDY+E D + D+ A GE A KKG YVGIH++GFRDFLLKPELLRAI
Sbjct: 6 EDQLLDYDEGDEEVEDTSAMNGKTVGGEIAADGQKKGNYVGIHATGFRDFLLKPELLRAI 65
Query: 62 VDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ--TEPNPGQVTALV 119
VD GFEHPSEVQHE IPQAILG D++CQAKSGMGKTAVFVL+ LQQ + V L+
Sbjct: 66 VDCGFEHPSEVQHEAIPQAILGTDILCQAKSGMGKTAVFVLAILQQLNVDEKDSDVKVLI 125
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA 179
+CHTRELAYQI +EF+RFS Y P++K V YGGV I K++L PQI++GTPGR+LA
Sbjct: 126 MCHTRELAYQIKNEFDRFSKYFPNVKNGVVYGGVPISEDKEMLSKSHPQILIGTPGRVLA 185
Query: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
L R K L L +V HF+LDECDK L+ LDMR+D+Q +F TP KQVMMFSAT+SKE+R V
Sbjct: 186 LVRGKHLDLSHVEHFVLDECDKCLDKLDMRKDIQSVFIETPVKKQVMMFSATMSKEMREV 245
Query: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 299
CK+FM +P EI+VDD+ KLTLHGL Q++++L+E EKN+KL DLLDAL+FNQVVIFVKSV
Sbjct: 246 CKRFMNEPHEIFVDDDTKLTLHGLQQYFVRLAENEKNKKLTDLLDALEFNQVVIFVKSVQ 305
Query: 300 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNI 359
RA L LL ECNFP+I IHS + Q +R+ RYK FK+ KRI+VATDL GRGIDIERVNI
Sbjct: 306 RAIALADLLTECNFPAIAIHSRLKQSDRIDRYKQFKDFKKRIMVATDLFGRGIDIERVNI 365
Query: 360 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKFMFLLIGSF 415
VINYD+PDS+D YLHRVGRAGRFGTKGLAITFVSS D+D+LNQV + +G
Sbjct: 366 VINYDIPDSSDQYLHRVGRAGRFGTKGLAITFVSSEEDTDMLNQVQARFEVTVGEL 421
>gi|255645017|gb|ACU23008.1| unknown [Glycine max]
Length = 310
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 279/309 (90%), Positives = 290/309 (93%), Gaps = 3/309 (0%)
Query: 1 MGETRDNE-YEDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLR 59
MGE +D E YE+EL+DYEEE+ +APDS K E+ KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1 MGELKDTEAYEEELIDYEEEEEKAPDS--AKPVAESGKKGYVGIHSSGFRDFLLKPELLR 58
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ +P PGQV ALV
Sbjct: 59 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQVDPVPGQVAALV 118
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA 179
LCHTRELAYQICHEFERFSTYLPDIK AVFYGGVNIK+HK+LLKNECP IVVGTPGRILA
Sbjct: 119 LCHTRELAYQICHEFERFSTYLPDIKAAVFYGGVNIKVHKELLKNECPHIVVGTPGRILA 178
Query: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
LARDKDL LKNVRHFILDECDKMLESLDMRRDVQEIFK+TPHD+QVMMFSATLSKEIRPV
Sbjct: 179 LARDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDRQVMMFSATLSKEIRPV 238
Query: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 299
CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL E EKNRKLNDLLDALDFNQVVIFVKSVS
Sbjct: 239 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQETEKNRKLNDLLDALDFNQVVIFVKSVS 298
Query: 300 RAAELNKLL 308
RAAELNKLL
Sbjct: 299 RAAELNKLL 307
>gi|320586489|gb|EFW99159.1| ATP dependent RNA helicase [Grosmannia clavigera kw1407]
Length = 440
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 264/415 (63%), Positives = 322/415 (77%), Gaps = 18/415 (4%)
Query: 10 EDELLDYEEEDAQAPDSVATK-------ANGEAAKKG---------YVGIHSSGFRDFLL 53
E++L+DY +E+ + + A G+A+ G YVGIHS+GFRDFLL
Sbjct: 4 EEDLIDYSDEELNTTEGATSNGKKGSATAGGDASAAGSNSVDKKGSYVGIHSTGFRDFLL 63
Query: 54 KPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPG 113
KPEL RA D GFEHPSEVQ CIPQA++G D+ICQAKSG+GKTAVFVL+TLQQ EP G
Sbjct: 64 KPELFRATADCGFEHPSEVQQTCIPQALIGGDIICQAKSGLGKTAVFVLATLQQIEPVAG 123
Query: 114 QVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVV 171
+ + LV+CHTRELA+QI +E+ RFS Y+P+IK VFYGG I+ ++L+N+ P I+V
Sbjct: 124 ECSVLVMCHTRELAFQIRNEYNRFSKYMPEIKTGVFYGGTPIQKDAEILRNKETHPHIIV 183
Query: 172 GTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSAT 231
GTPGR+ AL RDK L L +VR F+LDECDKML+ +DMRRDVQEIF+ TP KQVMMFSAT
Sbjct: 184 GTPGRLNALVRDKYLRLGSVRIFVLDECDKMLDQIDMRRDVQEIFRATPQQKQVMMFSAT 243
Query: 232 LSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQV 291
LS EI+P+C+KFMQ+P E YVD++ KLTLHGL Q+YI L E EKNRKLN+LLD L FNQV
Sbjct: 244 LSDEIKPICRKFMQNPTEHYVDEDTKLTLHGLQQYYIPLEEREKNRKLNELLDELQFNQV 303
Query: 292 VIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRG 351
+IFVKS RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD+ GRG
Sbjct: 304 IIFVKSTVRATELDKLLRECNFPSIAVHSGVSQEERIRRYKEFKEFNKRICVATDVFGRG 363
Query: 352 IDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
IDIER+N+ INYD+P AD+YLHRVGRAGRFGTKGLAI+FVS+ D ++L + K
Sbjct: 364 IDIERINLAINYDLPADADSYLHRVGRAGRFGTKGLAISFVSNEQDKEVLKAIEK 418
>gi|350637145|gb|EHA25503.1| hypothetical protein ASPNIDRAFT_56669 [Aspergillus niger ATCC 1015]
Length = 444
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 277/421 (65%), Positives = 332/421 (78%), Gaps = 23/421 (5%)
Query: 9 YEDELLDYEEEDAQAPDSVATK----ANGEAAK------------KG-YVGIHSSGFRDF 51
+E++L+DY +E+ Q D+ AT +NGEA K KG YVGIHS+GFRDF
Sbjct: 3 HEEDLIDYSDEELQTTDAAATTAAPASNGEAKKGDLTVSGGRPDKKGSYVGIHSTGFRDF 62
Query: 52 LLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPN 111
LLK ELLRAI D GFEHPSEVQ CIP AIL +DV+CQAKSG+GKTAVFVL+TL Q EP
Sbjct: 63 LLKEELLRAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTLHQLEPV 122
Query: 112 PGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQI 169
PG+ + LV+CHTRELAYQI +E+ RFS YLPD+K AVFYGG I+ +LL N+ P I
Sbjct: 123 PGECSILVMCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPIQKDVELLSNKESYPNI 182
Query: 170 VVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLD----MRRDVQEIFKMTPHDKQV 225
VVGTPGR+ AL RDK LSL+NV+ F+LDECDKML+ + +R EIF+ TP DKQV
Sbjct: 183 VVGTPGRLNALVRDKKLSLRNVKAFVLDECDKMLDQIGEFIYVRLSYAEIFRATPADKQV 242
Query: 226 MMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDA 285
MMFSATLS+EIRPVCKKFM++P+E+YVDD+ KLTLHGL Q+YIKLSE EKNRKLN+LLD+
Sbjct: 243 MMFSATLSQEIRPVCKKFMRNPLEVYVDDDTKLTLHGLQQYYIKLSEAEKNRKLNELLDS 302
Query: 286 LDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVAT 345
L+FNQV+IFVKS RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VAT
Sbjct: 303 LEFNQVIIFVKSTLRANELDKLLRECNFPSIAVHSGVSQEERIKRYKEFKEFNKRICVAT 362
Query: 346 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVS 405
D+ GRGIDIER+N+ INYD+P AD+YLHRVGRAGRFGTKGL+I+FVS+ D +L +
Sbjct: 363 DVFGRGIDIERINLAINYDLPADADSYLHRVGRAGRFGTKGLSISFVSTEDDEKVLKDIE 422
Query: 406 K 406
K
Sbjct: 423 K 423
>gi|357529057|sp|Q5ASK8.2|SUB2_EMENI RecName: Full=ATP-dependent RNA helicase sub2
Length = 434
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 270/419 (64%), Positives = 325/419 (77%), Gaps = 29/419 (6%)
Query: 9 YEDELLDYEEEDAQA------------------PDSVATKANGEAAKKG-YVGIHSSGFR 49
+E++L+DY +E+ Q D T G A KKG YVGIHS+GFR
Sbjct: 3 HEEDLIDYSDEELQTTDAAATTATPAANGGQAKKDGELTVTGGRADKKGSYVGIHSTGFR 62
Query: 50 DFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTE 109
DFLLK ELLRAI D GFEHPSEVQ CIP AIL +DV+CQAKSG+GKTAVFVL+TL Q E
Sbjct: 63 DFLLKGELLRAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTLHQLE 122
Query: 110 PNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CP 167
P PG+ + LV+CHTRELAYQI +E+ RFS YLPD+K AVFYGG I+ ++L N+ P
Sbjct: 123 PVPGECSVLVMCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPIQKDIEVLSNKDTFP 182
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
I+VGTPGR+ AL RDK LSL+NV+ F+LDECDKML+ +DMRRDVQEIF+ TP DKQVMM
Sbjct: 183 NIIVGTPGRLNALVRDKKLSLRNVKAFVLDECDKMLDQIDMRRDVQEIFRATPTDKQVMM 242
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSATLS+++RP+CKKFM++P+E+YVDD+ KLTLHGL Q+YIKLSE EKNRKLN+LLD+L+
Sbjct: 243 FSATLSQDVRPICKKFMRNPLEVYVDDDTKLTLHGLQQYYIKLSEAEKNRKLNELLDSLE 302
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
FNQV+IFVKS RA EL+KLL ECNFPSI +HSG RYK FKE NKRI VATD+
Sbjct: 303 FNQVIIFVKSTIRANELDKLLRECNFPSIAVHSG--------RYKEFKEFNKRICVATDV 354
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
GRGIDIER+N+ INYD+P AD+YLHRVGRAGRFGTKGL+I+FVS+ D +L + K
Sbjct: 355 FGRGIDIERINLAINYDLPADADSYLHRVGRAGRFGTKGLSISFVSTPEDEQVLKDIEK 413
>gi|290562595|gb|ADD38693.1| Spliceosome RNA helicase BAT1 [Lepeophtheirus salmonis]
Length = 428
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 263/401 (65%), Positives = 319/401 (79%), Gaps = 8/401 (1%)
Query: 10 EDELLDYEEEDAQAPDSVATKANGEAA------KKGYVGIHSSGFRDFLLKPELLRAIVD 63
E ELLDYE+E ++ + K+NG+ + K YV IHSSGFRDF+LKPE+L+AIVD
Sbjct: 4 ESELLDYEDEAEES--LIKQKSNGDVSANKKSLKGAYVTIHSSGFRDFILKPEVLKAIVD 61
Query: 64 SGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHT 123
GFEHPSEVQHE IPQAILGMDV+CQAKSGMGKTAVFV++TLQQ +P LVLCHT
Sbjct: 62 CGFEHPSEVQHESIPQAILGMDVLCQAKSGMGKTAVFVIATLQQLDPEETHTRVLVLCHT 121
Query: 124 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARD 183
RELA+QI E+ERFS ++P +KV VF+GGV +K DLL + I VGTPGR+L L R
Sbjct: 122 RELAFQISKEYERFSKFIPALKVGVFFGGVPLKKDMDLLSKQTIHIAVGTPGRLLDLIRK 181
Query: 184 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF 243
+ L L NV+HFI+DECDKML++LDMR+DVQEIFKMTP KQVMMFSAT+SKEIRPVCK F
Sbjct: 182 RALKLDNVKHFIIDECDKMLDTLDMRKDVQEIFKMTPKQKQVMMFSATMSKEIRPVCKNF 241
Query: 244 MQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAE 303
MQDP+EI++D+++KLTLHGL QHY+K+ + KNRKL DLLD L+FNQV+IFVKSV R
Sbjct: 242 MQDPLEIFIDNDSKLTLHGLRQHYVKVKDNAKNRKLFDLLDELEFNQVIIFVKSVQRCIA 301
Query: 304 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 363
L KLL+ NFP+I IH M+Q++RL Y+ FK +KR+LVAT+L GRG+DIERVNIV NY
Sbjct: 302 LTKLLLTQNFPAIEIHRQMTQQQRLDNYQAFKNFHKRVLVATNLFGRGMDIERVNIVFNY 361
Query: 364 DMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
DMP+ +DTYLHRV RAGRFGT GLA+TFVS SD+ +LN V
Sbjct: 362 DMPEDSDTYLHRVARAGRFGTNGLAMTFVSDESDATVLNDV 402
>gi|406861567|gb|EKD14621.1| DEAD/DEAH box helicase [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 436
Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust.
Identities = 264/411 (64%), Positives = 324/411 (78%), Gaps = 14/411 (3%)
Query: 10 EDELLDYEEEDAQAPDSVAT----------KANGEAA-KKG-YVGIHSSGFRDFLLKPEL 57
E++L+DY +E+ D+ A G+ KKG YVGIH++GFR+FLLKPEL
Sbjct: 4 EEDLIDYSDEELGTNDAAPAAAANGGAKKGTATGDTTDKKGSYVGIHATGFREFLLKPEL 63
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA 117
LRAI D GFEHPSEVQ CIPQAILG DV+CQAKSG+GKTA+FVL++LQQ EP G+ +
Sbjct: 64 LRAITDCGFEHPSEVQQVCIPQAILGTDVLCQAKSGLGKTAIFVLTSLQQIEPVNGETSV 123
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPG 175
L++CHTRELAYQI +E+ RFS Y+PD+K +VFYGG I+ ++LKN+ P I+V TPG
Sbjct: 124 LIMCHTRELAYQIKNEYARFSKYMPDVKTSVFYGGTPIQKDAEILKNKDTHPHIIVATPG 183
Query: 176 RILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKE 235
R+ AL RDK L L + + F+LDECDKML+ +DMRRDVQEIF+ TP KQVMMFSATLS+E
Sbjct: 184 RLNALVRDKFLRLGSCKIFVLDECDKMLDQIDMRRDVQEIFRATPTQKQVMMFSATLSQE 243
Query: 236 IRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFV 295
+RP+CKKFMQ+P+EIYVDDE LTLHGL Q YIKL E EKNRKLN+LLD L FNQ +IFV
Sbjct: 244 VRPICKKFMQNPLEIYVDDEKTLTLHGLNQFYIKLDEKEKNRKLNELLDDLQFNQAIIFV 303
Query: 296 KSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIE 355
KS RA EL+KLL ECNFPS+ +HSG+SQEER+ RYK FK+ +RI VATD+ GRGIDIE
Sbjct: 304 KSTVRATELDKLLTECNFPSVAVHSGVSQEERIKRYKAFKDFQERICVATDVFGRGIDIE 363
Query: 356 RVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
R+N+ INYD+P AD+YLHRVGRAGRFGTKGL+I+FVSS +D ++L V K
Sbjct: 364 RINLAINYDLPADADSYLHRVGRAGRFGTKGLSISFVSSEADEEVLKSVEK 414
>gi|358393635|gb|EHK43036.1| hypothetical protein TRIATDRAFT_301009 [Trichoderma atroviride IMI
206040]
Length = 436
Score = 549 bits (1415), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/412 (64%), Positives = 322/412 (78%), Gaps = 14/412 (3%)
Query: 9 YEDELLDYEEED-----AQAPDSVATKANGEAAKKG-------YVGIHSSGFRDFLLKPE 56
+E++L+DY +E+ A + + GEAA G YVGIHS+GFRDFLLKPE
Sbjct: 3 HEEDLIDYSDEEIGAANDTAAATASNGKKGEAAASGAVDKKGSYVGIHSTGFRDFLLKPE 62
Query: 57 LLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVT 116
LLRAI D GFEHPSEVQ CIPQA+LG D+ICQAKSG+GKTAVFVL+TLQQ EP G+V+
Sbjct: 63 LLRAIGDCGFEHPSEVQQTCIPQALLGGDIICQAKSGLGKTAVFVLATLQQVEPVNGEVS 122
Query: 117 ALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTP 174
+V+CHTRELAYQI E+ RFS Y+PDIK VFYGG IK + LK + CP I+VGTP
Sbjct: 123 VVVMCHTRELAYQIRDEYNRFSKYMPDIKTGVFYGGTPIKNDVETLKGKDTCPHIIVGTP 182
Query: 175 GRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSK 234
GR+ AL RDK L L +VR F+LDECDKML+ DMR DVQ++F+ TP KQVMMFSATL++
Sbjct: 183 GRLKALVRDKALRLGSVRIFVLDECDKMLDQPDMRTDVQDVFRATPQQKQVMMFSATLAE 242
Query: 235 EIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIF 294
I+P+C+KFMQ+P E YVD++ KLTLHGL Q+YIKL E EKNRKLN+LLD L FNQV+IF
Sbjct: 243 NIKPICRKFMQNPTEHYVDEDTKLTLHGLQQYYIKLEEREKNRKLNELLDDLQFNQVIIF 302
Query: 295 VKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDI 354
VKS RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE KRI VATD+ GRGIDI
Sbjct: 303 VKSTVRATELDKLLRECNFPSIAVHSGVSQEERIRRYKEFKEFKKRICVATDVFGRGIDI 362
Query: 355 ERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
ER+N+ INYD+P A +YLHRVGRAGRFGTKGLAI+FVS+ D ++L ++ K
Sbjct: 363 ERINLAINYDLPGDASSYLHRVGRAGRFGTKGLAISFVSTEGDQEVLKEIEK 414
>gi|50293331|ref|XP_449077.1| hypothetical protein [Candida glabrata CBS 138]
gi|74690687|sp|Q6FL17.1|SUB2_CANGA RecName: Full=ATP-dependent RNA helicase SUB2
gi|49528390|emb|CAG62047.1| unnamed protein product [Candida glabrata]
Length = 439
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 265/416 (63%), Positives = 329/416 (79%), Gaps = 3/416 (0%)
Query: 3 ETRDNEYEDELLDYEEEDAQAPDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAI 61
E DNE E ++ + E ++ AT+ NGEA KKG YVGIHS+GF+DFLLKPEL RAI
Sbjct: 11 EYSDNEQEIQVDNKETAVEGTTENEATQENGEADKKGSYVGIHSTGFKDFLLKPELSRAI 70
Query: 62 VDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLC 121
+D GFEHPSEVQ IPQ+I G DV+CQAKSG+GKTAVFVLSTLQQ +P PG+V+ +V+C
Sbjct: 71 IDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQQLDPVPGEVSVVVIC 130
Query: 122 HTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILA 179
+ RELAYQI +E+ RFS Y+PD++ AVFYGG I +LLKN+ P IVV TPGR+ A
Sbjct: 131 NARELAYQIRNEYLRFSKYMPDVRTAVFYGGTPIAKDAELLKNKDTAPHIVVATPGRLKA 190
Query: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
L RDK + L +V++F++DECDK+LE LDMRRDVQEIF+ TP DKQVMMFSATLS+EIRP+
Sbjct: 191 LVRDKMIDLSHVKNFVIDECDKVLEELDMRRDVQEIFRATPRDKQVMMFSATLSQEIRPI 250
Query: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 299
C++F+Q+P+EI+VDDEAKLTLHGL Q+YIKL E EKNRKL LLD L+FNQV+IFVKS S
Sbjct: 251 CRRFLQNPLEIFVDDEAKLTLHGLQQYYIKLEEREKNRKLAQLLDDLEFNQVIIFVKSTS 310
Query: 300 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNI 359
RA EL KLL NFP+I +H M QEER+ RYK FK+ KRI V+TD+ GRGIDIER+N+
Sbjct: 311 RANELTKLLNASNFPAITVHGHMKQEERIARYKAFKDFEKRICVSTDVFGRGIDIERINL 370
Query: 360 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKFMFLLIGSF 415
INYD+ + AD YLHRVGRAGRFGTKGLAI+FVS+ D ++L+++ + + I F
Sbjct: 371 AINYDLLNEADQYLHRVGRAGRFGTKGLAISFVSNKEDEEVLSKIQERFDVKIAEF 426
>gi|195155470|ref|XP_002018627.1| GL25900 [Drosophila persimilis]
gi|194114780|gb|EDW36823.1| GL25900 [Drosophila persimilis]
Length = 403
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 271/400 (67%), Positives = 317/400 (79%), Gaps = 29/400 (7%)
Query: 11 DELLDYEEEDAQAPDSVATKANGEAAKKG----YVGIHSSGFRDFLLKPELLRAIVDSGF 66
D+LLDYE+E+ +V N EA KK YV IHSSGFRDFLLKPE+LRAIVD GF
Sbjct: 5 DDLLDYEDEEQTETTAVE---NQEAPKKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCGF 61
Query: 67 EHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEP-NPGQVTALVLCHTRE 125
EHPSEVQHECIPQA+LGMD++CQAKSGMGKTAVFVL+TLQQ EP + LV+CHTRE
Sbjct: 62 EHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPADNNTCHVLVMCHTRE 121
Query: 126 LAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKD 185
LA+QI E+ERFS Y+P +KVAVF+GG+ I+ ++ LK+ P IVVGTPGRILAL R+K
Sbjct: 122 LAFQISKEYERFSKYMPTVKVAVFFGGLAIQKDEETLKSGTPHIVVGTPGRILALIRNKK 181
Query: 186 LSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQ 245
L+LK+++HF+LDECDKMLE LDMRRDVQEIF+ +PH KQVMMFSATLSK+IRPVCKKFMQ
Sbjct: 182 LNLKHLKHFVLDECDKMLEQLDMRRDVQEIFRSSPHGKQVMMFSATLSKDIRPVCKKFMQ 241
Query: 246 DPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELN 305
DPME+YVDDEAKLTLHGL QHY+ L E EKN+KL +LLD L+FNQ
Sbjct: 242 DPMEVYVDDEAKLTLHGLQQHYVNLKENEKNKKLFELLDVLEFNQ--------------- 286
Query: 306 KLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDM 365
NFP+I IH GM+QEERL RY+ FK+ KRILVAT+L GRG+DIERVNIV NYDM
Sbjct: 287 ------NFPAIGIHRGMTQEERLNRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDM 340
Query: 366 PDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVS 405
P+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN+V
Sbjct: 341 PEDSDTYLHRVARAGRFGTKGLAITFVSDDNDAKILNEVQ 380
>gi|330906893|ref|XP_003295639.1| hypothetical protein PTT_01995 [Pyrenophora teres f. teres 0-1]
gi|311332936|gb|EFQ96278.1| hypothetical protein PTT_01995 [Pyrenophora teres f. teres 0-1]
Length = 438
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 269/414 (64%), Positives = 329/414 (79%), Gaps = 16/414 (3%)
Query: 9 YEDELLDYEEEDAQAPD------SVATKAN---GEAA--KKG-YVGIHSSGFRDFLLKPE 56
+E++L+DY +E+ Q + + ATKA+ G+AA KKG YVGIHS+GFRDFLLK E
Sbjct: 3 HEEDLIDYSDEEIQPTEIPSNGAAAATKADLTAGDAAGDKKGSYVGIHSTGFRDFLLKDE 62
Query: 57 LLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTE--PNPGQ 114
L+RAI D GFEHPSEVQ IPQAILG DV+CQAKSG+GKTAVFVL+TLQQ + P PG
Sbjct: 63 LVRAITDCGFEHPSEVQQVTIPQAILGNDVLCQAKSGLGKTAVFVLATLQQMDEKPEPGA 122
Query: 115 VTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVG 172
T LV+CHTRELAYQI +E+ RF+ +LPD++V VFYGG ++ +LL N+ P I+VG
Sbjct: 123 ATILVMCHTRELAYQIRNEYNRFAKFLPDVRVGVFYGGTPVQKDIELLSNKDTHPHIIVG 182
Query: 173 TPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATL 232
TPGRI AL RD+ L L N++HF+LDECDKML+ DMR DVQ IF+ TP KQVMMFSATL
Sbjct: 183 TPGRINALVRDRHLRLANLKHFVLDECDKMLDQPDMRNDVQAIFRATPQHKQVMMFSATL 242
Query: 233 SKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVV 292
+K++R VCKKFMQ+P+EIYVDDE KLTLHGL Q+Y+KL E EKNRKLNDLLD+L+FNQV+
Sbjct: 243 NKDVRVVCKKFMQNPLEIYVDDEKKLTLHGLQQYYMKLDEKEKNRKLNDLLDSLEFNQVI 302
Query: 293 IFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGI 352
IFV+S R +EL+KLL ECNFPS +HSG+SQEER+ RYK FKE RI V+TD+ GRGI
Sbjct: 303 IFVRSTLRCSELDKLLRECNFPSTAVHSGISQEERIKRYKEFKEFQTRICVSTDIFGRGI 362
Query: 353 DIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
D+ER+N+ INYDMPD AD YLHRVGRAGRFGTKGL+I+FVSS D +L + +
Sbjct: 363 DVERINVAINYDMPDKADAYLHRVGRAGRFGTKGLSISFVSSPDDEAVLKSIEE 416
>gi|328873781|gb|EGG22147.1| DEAD/DEAH box helicase [Dictyostelium fasciculatum]
Length = 426
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 266/403 (66%), Positives = 320/403 (79%), Gaps = 8/403 (1%)
Query: 11 DELLDYEEEDAQAPDSVATKANGEA----AKKGYVGIHSSGFRDFLLKPELLRAIVDSGF 66
+EL +YEE D P+ + NG + AK +V +HSSGFR+FLLKPEL R I D GF
Sbjct: 9 NELAEYEESD---PEDNVQETNGGSKNVSAKDTHVAMHSSGFREFLLKPELERVIGDCGF 65
Query: 67 EHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTREL 126
EHPSEVQ+ECIPQAILG DVICQAKSGMGKTAVFVLS LQQ + NP V ALVLCHTREL
Sbjct: 66 EHPSEVQNECIPQAILGHDVICQAKSGMGKTAVFVLSLLQQIDKNPSGVVALVLCHTREL 125
Query: 127 AYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDL 186
AYQIC EF+RF Y+P +K AV YGG+ I K+LL+++ P IV+GTPGR+LALA DK L
Sbjct: 126 AYQICDEFDRFVKYMPQVKTAVIYGGIPINTQKELLRDKQPNIVIGTPGRVLALATDKSL 185
Query: 187 SLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQD 246
SLKNV+HF+LDECD +LE+LDMR+DVQ+IFK TP KQVMMFSATLS+ IR VCKKFM
Sbjct: 186 SLKNVKHFVLDECDSLLEALDMRKDVQKIFKATPASKQVMMFSATLSESIRSVCKKFMNH 245
Query: 247 PMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNK 306
P EIY++D +KLTLHGL Q++IKL+E +KN+KL DLLD LDFNQ+VIFVKSV RA LN+
Sbjct: 246 PFEIYINDGSKLTLHGLQQYFIKLNEDQKNKKLVDLLDGLDFNQIVIFVKSVERAKLLNQ 305
Query: 307 LLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMP 366
+L + F SICIH G+ Q ER+ +Y+ FK R++VAT++ GRGIDIERVN+VINYDM
Sbjct: 306 ILSDVGFSSICIHRGLDQPERIEQYRKFKNFQSRVMVATNIFGRGIDIERVNVVINYDMA 365
Query: 367 DSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV-SKFM 408
+S DTYLHRVGRAGRFGTKGLAI+F++S D L+ V SKF+
Sbjct: 366 ESPDTYLHRVGRAGRFGTKGLAISFITSPDDQTTLDTVQSKFV 408
>gi|156545225|ref|XP_001606735.1| PREDICTED: ATP-dependent RNA helicase WM6-like [Nasonia
vitripennis]
Length = 428
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 274/384 (71%), Positives = 316/384 (82%), Gaps = 1/384 (0%)
Query: 23 APDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAIL 82
A DS A E K YV IHSS FRDFLLKPELLRAI D GFEHPSEVQHECIPQA+L
Sbjct: 24 ASDSEVAPAKKEV-KGTYVSIHSSSFRDFLLKPELLRAISDCGFEHPSEVQHECIPQAVL 82
Query: 83 GMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLP 142
GMD++CQAKSGMGKTA+FVL+TLQQ E +V LV+CHTRELA+QI E+ERFS YLP
Sbjct: 83 GMDILCQAKSGMGKTAIFVLATLQQLELAENKVLGLVMCHTRELAFQISKEYERFSKYLP 142
Query: 143 DIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKM 202
+KV+VF+GG+ I+ K++LKN CP IVVGTPGRI AL + K LSL++++ FILDECDKM
Sbjct: 143 KVKVSVFFGGMPIQKDKEVLKNNCPHIVVGTPGRISALVKGKKLSLQHLKFFILDECDKM 202
Query: 203 LESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHG 262
LE LDMR+DVQ IF+ TPH KQVMMFSATLSKEIRPVCKKFMQDPME+YVDDEAKLTLHG
Sbjct: 203 LEQLDMRQDVQYIFRSTPHGKQVMMFSATLSKEIRPVCKKFMQDPMEVYVDDEAKLTLHG 262
Query: 263 LVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGM 322
L QHY+KL E EKN+KL +LLD L+FNQVVIFVKSV R L +LL E NFP+I IH GM
Sbjct: 263 LQQHYLKLKEKEKNKKLFELLDELEFNQVVIFVKSVQRCNSLTQLLTEENFPTIGIHKGM 322
Query: 323 SQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRF 382
+QEERLT+Y+ FK+ +RILVAT+L GRG+DIERVNIV NYDMP+++DTYLHRV RAGRF
Sbjct: 323 TQEERLTKYQSFKDFQQRILVATNLFGRGLDIERVNIVFNYDMPENSDTYLHRVARAGRF 382
Query: 383 GTKGLAITFVSSASDSDILNQVSK 406
GTKGLAITF +D ILN V +
Sbjct: 383 GTKGLAITFDCDEADDKILNDVQE 406
>gi|154277506|ref|XP_001539594.1| ATP-dependent RNA helicase SUB2 [Ajellomyces capsulatus NAm1]
gi|150413179|gb|EDN08562.1| ATP-dependent RNA helicase SUB2 [Ajellomyces capsulatus NAm1]
Length = 484
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 277/461 (60%), Positives = 336/461 (72%), Gaps = 63/461 (13%)
Query: 9 YEDELLDYEEEDAQAPDSVA------------------TKANGEAAKKG-YVGIHSSGFR 49
+E++L+DY +E+ QA D+ A T + A KKG YVGIHS+GFR
Sbjct: 3 HEEDLIDYSDEELQATDAAAGTAAAGANGAAPKKEGDLTVSGARADKKGSYVGIHSTGFR 62
Query: 50 DFLLKPELLRAIVDSGFEHPSE----------------------------VQHE------ 75
DFLLK ELLRAI D GFEHPSE H
Sbjct: 63 DFLLKGELLRAITDCGFEHPSEGFFMSVSALGTAARRKRGYSINGWQYSAAWHNYLSISV 122
Query: 76 --------CIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELA 127
CIP AIL +DV+CQAKSG+GKTAVFVL+TL Q EP PG+ + LV+CHTRELA
Sbjct: 123 IFGKGNQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTLHQLEPVPGECSILVMCHTRELA 182
Query: 128 YQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL--KNECPQIVVGTPGRILALARDKD 185
YQI +E+ RFS YLPD+K AVFYGG ++ +LL K+ P IVVGTPGR+ AL RDK
Sbjct: 183 YQIKNEYARFSKYLPDVKTAVFYGGTPMQKDIELLSSKDTYPSIVVGTPGRLNALVRDKK 242
Query: 186 LSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQ 245
LSL+N++ F+LDECDKML+ +DMRRDVQEIF+ TP DKQVMMFSATLS+E+RP+CKKFM+
Sbjct: 243 LSLRNIKAFVLDECDKMLDQIDMRRDVQEIFRATPADKQVMMFSATLSQEVRPICKKFMR 302
Query: 246 DPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELN 305
+P+E+YVDD+ KLTLHGL+Q+YIKL E EKNRKLN+LLD+L+FNQV+IFVKS RA+EL+
Sbjct: 303 NPLEVYVDDDTKLTLHGLLQYYIKLGESEKNRKLNELLDSLEFNQVIIFVKSTQRASELD 362
Query: 306 KLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDM 365
KLL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD+ GRGIDIER+N+ INYD+
Sbjct: 363 KLLRECNFPSIAVHSGVSQEERIKRYKEFKEFNKRICVATDVFGRGIDIERINLAINYDL 422
Query: 366 PDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
P AD+YLHRVGRAGRFGTKGLAI+FVSS D ++L + K
Sbjct: 423 PADADSYLHRVGRAGRFGTKGLAISFVSSEQDQEVLKDIEK 463
>gi|347828919|emb|CCD44616.1| similar to ATP-dependent RNA helicase sub2 [Botryotinia fuckeliana]
Length = 444
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 258/384 (67%), Positives = 315/384 (82%), Gaps = 3/384 (0%)
Query: 26 SVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGM 84
++ N AAKKG YVGIHS+GFR+FLLKPELLRAI GFEHPSEVQ CIPQAILG
Sbjct: 38 NLTVSGNAAAAKKGSYVGIHSTGFREFLLKPELLRAISWCGFEHPSEVQQVCIPQAILGT 97
Query: 85 DVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDI 144
DV+CQAKSG+GKTAVFVL+TLQQ E G+ + LV+CHTRELAYQI +E++RF ++PD+
Sbjct: 98 DVLCQAKSGLGKTAVFVLTTLQQVEVVAGETSVLVMCHTRELAYQIRNEYQRFCHFMPDV 157
Query: 145 KVAVFYGGVNIKIHKDLLKN--ECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKM 202
K+ VFYGGV I ++LKN P I+VGTPGR+ AL RDK L L +V+ F+LDECDKM
Sbjct: 158 KIGVFYGGVPISKDVEVLKNPETHPHIIVGTPGRLNALVRDKYLRLNSVKVFVLDECDKM 217
Query: 203 LESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHG 262
L+ +DMRRDVQEIF+ TP KQVMMFSATLS+E+RP+CKKFMQ+P+EIY+D+E KLTL+G
Sbjct: 218 LDQIDMRRDVQEIFRATPPQKQVMMFSATLSQEVRPICKKFMQNPLEIYIDNETKLTLYG 277
Query: 263 LVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGM 322
L Q+YIKL E EKNR+LN+LLD L FNQV+IFVKS RA EL+KLL ECNFPS+ IHSG+
Sbjct: 278 LQQYYIKLEEKEKNRRLNELLDELSFNQVIIFVKSTVRATELDKLLRECNFPSVAIHSGV 337
Query: 323 SQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRF 382
SQEER+ R+ FK+ NKRI VATD+ GRGID+ ++N+ INYD+P AD+YLHRVGRAGRF
Sbjct: 338 SQEERIKRFNDFKDFNKRICVATDVFGRGIDVNKINLAINYDLPPDADSYLHRVGRAGRF 397
Query: 383 GTKGLAITFVSSASDSDILNQVSK 406
GTKGLAI+FVS+ +D ++L V K
Sbjct: 398 GTKGLAISFVSNEADQEVLKAVEK 421
>gi|156055836|ref|XP_001593842.1| hypothetical protein SS1G_05270 [Sclerotinia sclerotiorum 1980]
gi|160358709|sp|A7EIX7.1|SUB2_SCLS1 RecName: Full=ATP-dependent RNA helicase sub2
gi|154703054|gb|EDO02793.1| hypothetical protein SS1G_05270 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 444
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 258/384 (67%), Positives = 315/384 (82%), Gaps = 3/384 (0%)
Query: 26 SVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGM 84
++ N AAKKG YVGIHS+GFR+FLLKPELLRAI GFEHPSEVQ CIPQAILG
Sbjct: 38 NLTVSGNAAAAKKGSYVGIHSTGFREFLLKPELLRAISWCGFEHPSEVQQVCIPQAILGT 97
Query: 85 DVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDI 144
DV+CQAKSG+GKTAVFVL+TLQQ E G+ + LV+CHTRELAYQI +E++RF ++PD+
Sbjct: 98 DVLCQAKSGLGKTAVFVLTTLQQVEVVAGETSVLVMCHTRELAYQIRNEYQRFCHFMPDV 157
Query: 145 KVAVFYGGVNIKIHKDLLKN--ECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKM 202
K+ VFYGGV I ++LKN P I+VGTPGR+ AL RDK L L +V+ F+LDECDKM
Sbjct: 158 KIGVFYGGVPISKDVEVLKNPETHPHIIVGTPGRLNALVRDKYLRLNSVKVFVLDECDKM 217
Query: 203 LESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHG 262
L+ +DMRRDVQEIF+ TP KQVMMFSATLS+E+RP+CKKFMQ+P+EIY+D+E KLTL+G
Sbjct: 218 LDQIDMRRDVQEIFRATPPQKQVMMFSATLSQEVRPICKKFMQNPLEIYIDNETKLTLYG 277
Query: 263 LVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGM 322
L Q+YIKL E EKNR+LN+LLD L FNQV+IFVKS RA EL+KLL ECNFPS+ IHSG+
Sbjct: 278 LQQYYIKLEEREKNRRLNELLDELSFNQVIIFVKSTVRATELDKLLRECNFPSVAIHSGV 337
Query: 323 SQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRF 382
SQEER+ R+ FK+ NKRI VATD+ GRGID+ ++N+ INYD+P AD+YLHRVGRAGRF
Sbjct: 338 SQEERIKRFNDFKDFNKRICVATDVFGRGIDVNKINLAINYDLPPDADSYLHRVGRAGRF 397
Query: 383 GTKGLAITFVSSASDSDILNQVSK 406
GTKGLAI+FVS+ +D ++L V K
Sbjct: 398 GTKGLAISFVSNEADQEVLKAVEK 421
>gi|255720512|ref|XP_002556536.1| KLTH0H15686p [Lachancea thermotolerans]
gi|238942502|emb|CAR30674.1| KLTH0H15686p [Lachancea thermotolerans CBS 6340]
Length = 439
Score = 545 bits (1404), Expect = e-152, Method: Compositional matrix adjust.
Identities = 261/416 (62%), Positives = 326/416 (78%), Gaps = 3/416 (0%)
Query: 3 ETRDNEYEDELLDYEEEDAQAPDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAI 61
E DNE E ++ + +A A + + GEA KKG YVGIHS+GF+DFLLKPEL RAI
Sbjct: 11 EYSDNEQEIQVEASKAAEAGADTKDSGETTGEADKKGSYVGIHSTGFKDFLLKPELSRAI 70
Query: 62 VDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLC 121
+D GFEHPSEVQ IPQ+I G DV+CQAKSG+GKTAVFVLSTLQQ +P PG+V+ +V+C
Sbjct: 71 IDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQQLDPVPGEVSVVVIC 130
Query: 122 HTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILA 179
+ RELAYQI +E+ RFS Y+PD+K AVFYGG I +LLKN+ P IVV TPGR+ A
Sbjct: 131 NARELAYQIRNEYLRFSKYMPDVKTAVFYGGTPITKDAELLKNKETAPHIVVATPGRLKA 190
Query: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
L RDK + L +V++F++DECDK+LE L MR+DVQ+IF+ TP DKQVMMFSATLS+E+RP+
Sbjct: 191 LVRDKIIDLSSVKNFVIDECDKVLEELGMRKDVQDIFRATPRDKQVMMFSATLSQEMRPI 250
Query: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 299
C++F+Q+P+EI+VDDEAKLTLHGL Q+YIKL E EKNRKL LLD L+FNQV+IFVKS +
Sbjct: 251 CRRFLQNPLEIFVDDEAKLTLHGLQQYYIKLEEREKNRKLAQLLDDLEFNQVIIFVKSTN 310
Query: 300 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNI 359
RA EL KLL NFP+I +H GM QEER+ RYK FKE KRI V+TD+ GRGIDIER+N+
Sbjct: 311 RANELTKLLNASNFPAITVHGGMKQEERIARYKAFKEFEKRICVSTDVFGRGIDIERINL 370
Query: 360 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKFMFLLIGSF 415
INYD+P AD YLHRVGRAGRFGTKGLAI+FV+++ D +IL ++ + + F
Sbjct: 371 AINYDLPSEADQYLHRVGRAGRFGTKGLAISFVATSEDEEILAKIQDRFDVKVAEF 426
>gi|86196514|gb|EAQ71152.1| hypothetical protein MGCH7_ch7g559 [Magnaporthe oryzae 70-15]
gi|440472238|gb|ELQ41114.1| ATP-dependent RNA helicase SUB2 [Magnaporthe oryzae Y34]
gi|440482200|gb|ELQ62715.1| ATP-dependent RNA helicase SUB2 [Magnaporthe oryzae P131]
Length = 450
Score = 543 bits (1398), Expect = e-152, Method: Compositional matrix adjust.
Identities = 273/429 (63%), Positives = 324/429 (75%), Gaps = 21/429 (4%)
Query: 8 EYEDELLDYEEEDAQAPDSVATK----ANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIV 62
+Y DE L+ E A A DS K A G KKG YVGIHS+GFRDFLLKPELLRAI
Sbjct: 9 DYSDEELNTNETAAPAADSNGKKGELAAGGNVDKKGSYVGIHSTGFRDFLLKPELLRAIG 68
Query: 63 DSGFEHPSE--------------VQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQT 108
D GFEHPSE CIPQA+LG D+ICQAKSG+GKTAVFVL+TLQQ
Sbjct: 69 DCGFEHPSEDGLNILCGCQGGAHACITCIPQAMLGGDIICQAKSGLGKTAVFVLTTLQQV 128
Query: 109 EPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--C 166
EP G+ + LV+CHTRELA+QI +E+ RFS Y+PDIK VF+GG I+ +LLKN+
Sbjct: 129 EPVAGECSVLVMCHTRELAFQIRNEYNRFSKYMPDIKTGVFFGGTPIQKDAELLKNKETH 188
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
P I+VGTPGR+ AL RDK L L +VR F+LDECDKML+ +DMRRDVQEIF+ TP KQVM
Sbjct: 189 PHIIVGTPGRLNALVRDKFLRLSSVRIFVLDECDKMLDQIDMRRDVQEIFRATPQQKQVM 248
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
MFSATLS EI+P+CKKFMQ+P E YVD++ KLTLHGL Q+++ L E EKNRKLN+LLD L
Sbjct: 249 MFSATLSDEIKPICKKFMQNPTEHYVDEDTKLTLHGLQQYFVALEEKEKNRKLNELLDDL 308
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
FNQV+IFVKS RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD
Sbjct: 309 QFNQVIIFVKSTLRATELDKLLRECNFPSIAVHSGVSQEERIRRYKEFKEFNKRICVATD 368
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
+ GRGIDIER+N+ INYDMP AD+YLHRVGRAGRFGTKGLA++FV++ D ++L + K
Sbjct: 369 VFGRGIDIERINLAINYDMPADADSYLHRVGRAGRFGTKGLAVSFVTNDQDKEVLTAIEK 428
Query: 407 FMFLLIGSF 415
+ I F
Sbjct: 429 RFEVPIPEF 437
>gi|444317132|ref|XP_004179223.1| hypothetical protein TBLA_0B08880 [Tetrapisispora blattae CBS 6284]
gi|387512263|emb|CCH59704.1| hypothetical protein TBLA_0B08880 [Tetrapisispora blattae CBS 6284]
Length = 442
Score = 543 bits (1398), Expect = e-152, Method: Compositional matrix adjust.
Identities = 265/427 (62%), Positives = 332/427 (77%), Gaps = 18/427 (4%)
Query: 7 NEYEDELLDY---EEE-------DAQAPDSVATKANGEAA-----KKG-YVGIHSSGFRD 50
NE E++LL+Y E+E +A + ++V T A+GEA KKG YVGIHS+GF+D
Sbjct: 3 NEGEEDLLEYSDNEQEIQIDANANATSSEAVTTSADGEAKDADAEKKGSYVGIHSTGFKD 62
Query: 51 FLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEP 110
FLLKPEL RAI+D GFEHPSEVQ IPQ+I G DV+CQAKSG+GKTAVFVLS+LQQ +P
Sbjct: 63 FLLKPELSRAIIDCGFEHPSEVQQSTIPQSIHGTDVLCQAKSGLGKTAVFVLSSLQQLDP 122
Query: 111 NPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQ 168
PG+ + +V+C+ RELAYQI +E+ RFS Y+PD+K AVFYGG I +LLKN+ P
Sbjct: 123 VPGEASVVVICNARELAYQIRNEYLRFSKYMPDVKTAVFYGGTPINKDAELLKNKDTAPH 182
Query: 169 IVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMF 228
IVV TPGR+ AL +DK + L +V++FI+DECDK+LE LDMRRDVQ+IF+ TP DKQVMMF
Sbjct: 183 IVVATPGRLKALVKDKLIDLSHVKNFIIDECDKVLEELDMRRDVQDIFRATPRDKQVMMF 242
Query: 229 SATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDF 288
SATLS+EIRP+C++F+Q+P+EI+VDDEAKLTLHGL Q +IKLSE +KNRKL LLD L+F
Sbjct: 243 SATLSQEIRPICRRFLQNPLEIFVDDEAKLTLHGLQQFFIKLSESDKNRKLAQLLDDLEF 302
Query: 289 NQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLV 348
NQV+IFVKS RA EL KLL NFP+I +H M QEER+ RYK FK+ KRI V+TD+
Sbjct: 303 NQVIIFVKSTKRANELTKLLNASNFPAITVHGSMKQEERIARYKAFKDFEKRICVSTDVF 362
Query: 349 GRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKFM 408
GRGIDIER+N+ INYD+ + AD YLHRVGRAGRFGTKGLAI+FVSS D ++L ++ +
Sbjct: 363 GRGIDIERINLAINYDLTNEADQYLHRVGRAGRFGTKGLAISFVSSTEDEEVLAKIQERF 422
Query: 409 FLLIGSF 415
+ I F
Sbjct: 423 DVKIAEF 429
>gi|45188133|ref|NP_984356.1| ADR260Cp [Ashbya gossypii ATCC 10895]
gi|74694117|sp|Q759L6.1|SUB2_ASHGO RecName: Full=ATP-dependent RNA helicase SUB2
gi|44982950|gb|AAS52180.1| ADR260Cp [Ashbya gossypii ATCC 10895]
gi|374107571|gb|AEY96479.1| FADR260Cp [Ashbya gossypii FDAG1]
Length = 438
Score = 542 bits (1397), Expect = e-151, Method: Compositional matrix adjust.
Identities = 266/423 (62%), Positives = 331/423 (78%), Gaps = 14/423 (3%)
Query: 7 NEYEDELLDY--EEEDAQAPDSVATK--ANGEAA-------KKG-YVGIHSSGFRDFLLK 54
+E E++LL+Y E++ Q ++ AT+ NGE A KKG YVGIHS+GF+DFLLK
Sbjct: 3 HEGEEDLLEYSDNEQEIQVDNTKATEVAGNGEEAADGKDGDKKGSYVGIHSTGFKDFLLK 62
Query: 55 PELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQ 114
PEL RAI+D GFEHPSEVQ IPQ+I G DV+CQAKSG+GKTAVFVLSTLQQ +P PG+
Sbjct: 63 PELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQQLDPVPGE 122
Query: 115 VTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVG 172
V+ +VLC+ RELAYQI +E+ RFS Y+PD+K AVFYGG + + +LLKN+ P IVV
Sbjct: 123 VSVVVLCNARELAYQIRNEYLRFSKYMPDVKTAVFYGGTDTRKDIELLKNKDTAPHIVVA 182
Query: 173 TPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATL 232
TPGR+ AL RD ++ L +V++F++DECDK+LE LDMRRDVQ+IF+ TP DKQVMMFSATL
Sbjct: 183 TPGRLKALVRDNNIDLSHVKNFVIDECDKVLEELDMRRDVQDIFRATPRDKQVMMFSATL 242
Query: 233 SKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVV 292
S+EIRP+C++F+Q+P+EI+VDDEAKLTLHGL Q+YI+L E EKNRKL LLD L+FNQV+
Sbjct: 243 SQEIRPICRRFLQNPLEIFVDDEAKLTLHGLQQYYIRLEEREKNRKLAQLLDDLEFNQVI 302
Query: 293 IFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGI 352
IFVKS RA EL KLL NFP+I +H M QEER+ RYK FKE KRI V+TD+ GRGI
Sbjct: 303 IFVKSTLRANELTKLLNASNFPAITVHGHMRQEERIARYKAFKEFEKRICVSTDVFGRGI 362
Query: 353 DIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKFMFLLI 412
DIER+N+ INYDMP AD YLHRVGRAGRFGTKGLAI+ VSS D ++L ++ + + I
Sbjct: 363 DIERINLAINYDMPSEADQYLHRVGRAGRFGTKGLAISLVSSKDDEEVLAKIQERFDVKI 422
Query: 413 GSF 415
F
Sbjct: 423 TEF 425
>gi|156843532|ref|XP_001644833.1| hypothetical protein Kpol_1041p33 [Vanderwaltozyma polyspora DSM
70294]
gi|160358707|sp|A7TLA0.1|SUB21_VANPO RecName: Full=ATP-dependent RNA helicase SUB2-1
gi|156115484|gb|EDO16975.1| hypothetical protein Kpol_1041p33 [Vanderwaltozyma polyspora DSM
70294]
Length = 441
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 266/426 (62%), Positives = 328/426 (76%), Gaps = 17/426 (3%)
Query: 7 NEYEDELLDY--EEEDAQAPDSVATK------------ANGEAAKKG-YVGIHSSGFRDF 51
+E E++LL+Y E+D Q S A + +NG+A KKG YVGIHS+GF+DF
Sbjct: 3 HEGEEDLLEYSDNEQDIQVDASKAAEPSELDATTAEDASNGDAEKKGSYVGIHSTGFKDF 62
Query: 52 LLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPN 111
LLKPEL RAI+D GFEHPSEVQ IPQ+I G DV+CQAKSG+GKTAVFVLSTLQQ +P
Sbjct: 63 LLKPELARAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQQLDPV 122
Query: 112 PGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQI 169
PG+V+ +V+C+ RELAYQI +E+ RFS Y+PD+K AVFYGG I +LLKN+ P I
Sbjct: 123 PGEVSVVVICNARELAYQIRNEYLRFSKYMPDVKTAVFYGGTPINKDAELLKNKETAPHI 182
Query: 170 VVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFS 229
VV TPGR+ AL RDK + L +V++F++DECDK+LE LDMRRDVQ+IF+ TP DKQVMMFS
Sbjct: 183 VVATPGRLKALVRDKLIDLSHVKNFVIDECDKVLEELDMRRDVQDIFRATPRDKQVMMFS 242
Query: 230 ATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFN 289
ATLS+EIRP+C++F+Q+P+EI+VDDEAKLTLHGL Q+Y KL E EKNRKL LLD L+FN
Sbjct: 243 ATLSEEIRPICRRFLQNPLEIFVDDEAKLTLHGLQQYYTKLQENEKNRKLAQLLDDLEFN 302
Query: 290 QVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVG 349
QV+IFVKS RA EL KLL E NFP+I +H M Q ER+ RYK FKE KRI V+TD+ G
Sbjct: 303 QVIIFVKSTKRANELTKLLNESNFPAITVHGHMKQAERIARYKAFKEFEKRICVSTDVFG 362
Query: 350 RGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKFMF 409
RGIDIER+N+ INYD+ AD YLHRVGRAGRFGTKGLAI+FVSS D ++L ++ +
Sbjct: 363 RGIDIERINLAINYDLTTEADQYLHRVGRAGRFGTKGLAISFVSSPEDEEVLGKIQERFD 422
Query: 410 LLIGSF 415
+ I F
Sbjct: 423 VKIAEF 428
>gi|254577481|ref|XP_002494727.1| ZYRO0A08272p [Zygosaccharomyces rouxii]
gi|238937616|emb|CAR25794.1| ZYRO0A08272p [Zygosaccharomyces rouxii]
Length = 443
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 257/391 (65%), Positives = 314/391 (80%), Gaps = 3/391 (0%)
Query: 28 ATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDV 86
A NG+A KKG YVGIHS+GF+DFLLKPEL RAI+D GFEHPSEVQ IPQ+I G DV
Sbjct: 40 AEGTNGDADKKGSYVGIHSTGFKDFLLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDV 99
Query: 87 ICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKV 146
+CQAKSG+GKTAVFVLSTLQQ +P PG+V +V+C+ RELAYQI +E+ RFS Y+PD+K
Sbjct: 100 LCQAKSGLGKTAVFVLSTLQQLDPVPGEVAVVVICNARELAYQIRNEYLRFSKYMPDVKT 159
Query: 147 AVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLE 204
AVFYGG I DLLKN+ P IVV TPGR+ AL RDK + L +V++F++DECDK+LE
Sbjct: 160 AVFYGGTPISKDADLLKNKETAPHIVVATPGRLKALVRDKLIDLSHVKNFVIDECDKVLE 219
Query: 205 SLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLV 264
LDMRRDVQEIF+ TP DKQVMMFSATLS+EIRP+C++F+Q+P+EI+VDDEAKLTLHGL
Sbjct: 220 ELDMRRDVQEIFRATPRDKQVMMFSATLSQEIRPICRRFLQNPLEIFVDDEAKLTLHGLQ 279
Query: 265 QHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQ 324
Q+YIKL E EKNRKL LLD L+FNQV+IFV+S +RA EL KLL NFP+I +H M Q
Sbjct: 280 QYYIKLDEKEKNRKLAQLLDDLEFNQVIIFVRSTARANELTKLLNASNFPAITVHGHMKQ 339
Query: 325 EERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGT 384
EER+ RYK FK+ KRI V+TD+ GRGIDIER+N+ +NYD+ AD YLHRVGRAGRFGT
Sbjct: 340 EERIARYKAFKDFEKRICVSTDVFGRGIDIERINLALNYDLTTEADQYLHRVGRAGRFGT 399
Query: 385 KGLAITFVSSASDSDILNQVSKFMFLLIGSF 415
KGLAI+F+SS D ++LN++ + + I F
Sbjct: 400 KGLAISFISSNEDEEVLNKIQERFDVKIAEF 430
>gi|210075100|ref|XP_499972.2| YALI0A11157p [Yarrowia lipolytica]
gi|218551749|sp|Q6CH90.2|SUB2_YARLI RecName: Full=ATP-dependent RNA helicase SUB2
gi|199424876|emb|CAG83901.2| YALI0A11157p [Yarrowia lipolytica CLIB122]
Length = 441
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 263/417 (63%), Positives = 322/417 (77%), Gaps = 17/417 (4%)
Query: 7 NEYEDELLDYE--EEDAQAPDSVATKANGEAA-------------KKGYVGIHSSGFRDF 51
+E E+ELLDY EE A +V + +NG+A K YVGIHS+GFRDF
Sbjct: 3 HEGEEELLDYSDSEEIALPSTTVESGSNGDAKAETTTVKEENTEQKGSYVGIHSTGFRDF 62
Query: 52 LLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPN 111
LLKPELLRAIVD GFEHPSEVQ CIPQ+ILG DV+CQAK+G+GKTAVFVLSTLQQ EP
Sbjct: 63 LLKPELLRAIVDCGFEHPSEVQQVCIPQSILGTDVLCQAKAGVGKTAVFVLSTLQQLEPV 122
Query: 112 PGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQI 169
PG+ + +VLCHTRELAYQI +E+ RFS YLPD+K AVFYGG I+ +L++N+ P +
Sbjct: 123 PGECSVVVLCHTRELAYQIMNEYARFSKYLPDVKTAVFYGGSPIQKDIELIQNKETSPHV 182
Query: 170 VVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFS 229
+V TPGR+ AL RDK L L NV+ F++DECDK+L+ +DMRRDVQEIF++TP KQVMMFS
Sbjct: 183 IVATPGRLHALVRDKHLRLGNVKTFVIDECDKVLDQIDMRRDVQEIFRVTPRQKQVMMFS 242
Query: 230 ATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFN 289
ATLS+EIRP+CKKFM P+EI VDDE KLTLHGL Q+Y+ + E KNRKL DLLD L+FN
Sbjct: 243 ATLSQEIRPICKKFMSSPLEILVDDEGKLTLHGLQQYYVDVEEKSKNRKLGDLLDNLEFN 302
Query: 290 QVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVG 349
QV+IFVKS SRA L+++L FP +HSG+ QEER+ RYK FKE KRI V+TD+ G
Sbjct: 303 QVIIFVKSTSRANGLSQVLNANGFPCTAVHSGIPQEERIARYKEFKEFKKRICVSTDVFG 362
Query: 350 RGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
RGIDIER+N+ INYD+P AD YLHRVGRAGRFGTKGLAI+FVS+ D ++L ++ +
Sbjct: 363 RGIDIERINLAINYDLPAEADQYLHRVGRAGRFGTKGLAISFVSTPEDKEVLAKIQE 419
>gi|67903470|ref|XP_681991.1| hypothetical protein AN8722.2 [Aspergillus nidulans FGSC A4]
gi|40741081|gb|EAA60271.1| hypothetical protein AN8722.2 [Aspergillus nidulans FGSC A4]
Length = 451
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 271/436 (62%), Positives = 325/436 (74%), Gaps = 46/436 (10%)
Query: 9 YEDELLDYEEEDAQA------------------PDSVATKANGEAAKKG-YVGIHSSGFR 49
+E++L+DY +E+ Q D T G A KKG YVGIHS+GFR
Sbjct: 3 HEEDLIDYSDEELQTTDAAATTATPAANGGQAKKDGELTVTGGRADKKGSYVGIHSTGFR 62
Query: 50 DFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTE 109
DFLLK ELLRAI D GFEHPSEVQ CIP AIL +DV+CQAKSG+GKTAVFVL+TL Q E
Sbjct: 63 DFLLKGELLRAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTLHQLE 122
Query: 110 PNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CP 167
P PG+ + LV+CHTRELAYQI +E+ RFS YLPD+K AVFYGG I+ ++L N+ P
Sbjct: 123 PVPGECSVLVMCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPIQKDIEVLSNKDTFP 182
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLES-----------------LDMRR 210
I+VGTPGR+ AL RDK LSL+NV+ F+LDECDKML+ LDMRR
Sbjct: 183 NIIVGTPGRLNALVRDKKLSLRNVKAFVLDECDKMLDQIGRSFNPNSQSRSPLTPLDMRR 242
Query: 211 DVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL 270
DVQEIF+ TP DKQVMMFSATLS+++RP+CKKFM++P+E+YVDD+ KLTLHGL Q+YIKL
Sbjct: 243 DVQEIFRATPTDKQVMMFSATLSQDVRPICKKFMRNPLEVYVDDDTKLTLHGLQQYYIKL 302
Query: 271 SELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTR 330
SE EKNRKLN+LLD+L+FNQV+IFVKS RA EL+KLL ECNFPSI +HSG R
Sbjct: 303 SEAEKNRKLNELLDSLEFNQVIIFVKSTIRANELDKLLRECNFPSIAVHSG--------R 354
Query: 331 YKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAIT 390
YK FKE NKRI VATD+ GRGIDIER+N+ INYD+P AD+YLHRVGRAGRFGTKGL+I+
Sbjct: 355 YKEFKEFNKRICVATDVFGRGIDIERINLAINYDLPADADSYLHRVGRAGRFGTKGLSIS 414
Query: 391 FVSSASDSDILNQVSK 406
FVS+ D +L + K
Sbjct: 415 FVSTPEDEQVLKDIEK 430
>gi|367016787|ref|XP_003682892.1| hypothetical protein TDEL_0G03140 [Torulaspora delbrueckii]
gi|359750555|emb|CCE93681.1| hypothetical protein TDEL_0G03140 [Torulaspora delbrueckii]
Length = 444
Score = 540 bits (1391), Expect = e-151, Method: Compositional matrix adjust.
Identities = 262/421 (62%), Positives = 324/421 (76%), Gaps = 8/421 (1%)
Query: 3 ETRDNEYEDELLDYEEEDAQAPDSVATKANGEAA-----KKG-YVGIHSSGFRDFLLKPE 56
E DNE E ++ E A+ +A GEA KKG YVGIHS+GF+DFLL+PE
Sbjct: 11 EYSDNEQEIQVDSKEAASAEVAKETDAEATGEANNADNDKKGSYVGIHSTGFKDFLLEPE 70
Query: 57 LLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVT 116
L RAI+D GFEHPSEVQ IPQ+I G DV+CQAKSG+GKTAVFVLSTLQQ +P PG+V+
Sbjct: 71 LSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQQLDPVPGEVS 130
Query: 117 ALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTP 174
+V+C+ RELAYQI +E+ RFS Y+PD+K AVFYGG I +LLKN+ P IVV TP
Sbjct: 131 VVVICNARELAYQIRNEYLRFSKYMPDVKTAVFYGGTPIAKDAELLKNKETAPHIVVATP 190
Query: 175 GRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSK 234
GR+ AL RDK + L +V++F++DECDK+LE LDMRRDVQEIF+ TP DKQVMMFSATLS+
Sbjct: 191 GRLKALVRDKLIDLSHVKNFVIDECDKVLEELDMRRDVQEIFRATPRDKQVMMFSATLSQ 250
Query: 235 EIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIF 294
EIRP+C++F+Q+P+EI+VDDEAKLTLHGL Q+YIKL E EKNRKL LLD L+FNQV+IF
Sbjct: 251 EIRPICRRFLQNPLEIFVDDEAKLTLHGLQQYYIKLEEREKNRKLAKLLDDLEFNQVIIF 310
Query: 295 VKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDI 354
V+S SRA EL KLL NFP++ +H M QEER+ RYK FK+ KRI V+TD+ GRGIDI
Sbjct: 311 VRSTSRANELTKLLNASNFPALTVHGHMKQEERIARYKAFKDFEKRICVSTDVFGRGIDI 370
Query: 355 ERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKFMFLLIGS 414
ER+N+ INYD+ AD YLHRVGRAGRFGTKGLAI+FVS+ D ++L ++ + + I
Sbjct: 371 ERINLAINYDLTTEADQYLHRVGRAGRFGTKGLAISFVSTKEDEEVLTKIQERFDVKIAE 430
Query: 415 F 415
F
Sbjct: 431 F 431
>gi|146197860|dbj|BAF57641.1| WM6 protein [Dugesia japonica]
Length = 403
Score = 540 bits (1391), Expect = e-151, Method: Compositional matrix adjust.
Identities = 257/369 (69%), Positives = 305/369 (82%), Gaps = 1/369 (0%)
Query: 37 KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGK 96
K+ V +H SGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAIL MDV+CQAKSGMGK
Sbjct: 11 KEVTVSMHRSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILSMDVLCQAKSGMGK 70
Query: 97 TAVFVLSTLQQTEP-NPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNI 155
TAVFVLSTLQQ + + G LVLCHTRELA+QI E+ERFS Y+ +I V+VFYGGV I
Sbjct: 71 TAVFVLSTLQQLDATDDGTCKVLVLCHTRELAFQISKEYERFSKYMSNINVSVFYGGVPI 130
Query: 156 KIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEI 215
+ + LK PQ++V TPGR+L L R K L+LK+V+HFILDECDKML+++ MR DVQE+
Sbjct: 131 RNDIEKLKKSVPQLIVATPGRLLDLVRQKALNLKSVKHFILDECDKMLDNVSMRGDVQEV 190
Query: 216 FKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEK 275
FK+TPH KQVMMFSATLSKEIRP+CKKFMQDP+EI++DD++KLTLHGL QHY+K+ E EK
Sbjct: 191 FKLTPHQKQVMMFSATLSKEIRPICKKFMQDPLEIFIDDDSKLTLHGLKQHYLKVKENEK 250
Query: 276 NRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFK 335
NRKL +LLD L FNQV++FVKSV R L LL E NFP+I IH M+QE+R++RY+ FK
Sbjct: 251 NRKLFELLDELQFNQVIVFVKSVQRCIALCNLLCEQNFPAIAIHRQMTQEDRISRYQAFK 310
Query: 336 EGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSA 395
KR+LVAT+L GRG+DIERVNIV NYDMP+ +DTYLHRV RAGRFGTKGLAITF+S
Sbjct: 311 NFQKRLLVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFISDE 370
Query: 396 SDSDILNQV 404
+D+ ILN V
Sbjct: 371 NDAKILNDV 379
>gi|66361130|ref|XP_627282.1| Sub2p like superfamily II helicase involved in snRNP biogenesis
[Cryptosporidium parvum Iowa II]
gi|46228851|gb|EAK89721.1| Sub2p like superfamily II helicase involved in snRNP biogenesis
[Cryptosporidium parvum Iowa II]
Length = 430
Score = 540 bits (1390), Expect = e-151, Method: Compositional matrix adjust.
Identities = 256/378 (67%), Positives = 308/378 (81%), Gaps = 3/378 (0%)
Query: 33 GEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKS 92
+ + YV IH+SGFRDF LKPEL+RAI D+GFEHPSEVQHE IP AI G+D++CQAKS
Sbjct: 34 SKVGRGNYVAIHASGFRDFFLKPELIRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKS 93
Query: 93 GMGKTAVFVLSTLQQTEPNPGQVTALVLC--HTRELAYQICHEFERFSTYLPDIKVAVFY 150
GMGKTAVFVLS LQQ P+ +C HTRELA+Q+ +EF+RFS YL ++K V Y
Sbjct: 94 GMGKTAVFVLSILQQLNPDEESKNVECICIGHTRELAFQVKNEFDRFSKYLKNVKPQVVY 153
Query: 151 GGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRR 210
GG+ I+ D+L N P I++GTPGRI+AL R K L + + HF+LDECDK LESLDMR+
Sbjct: 154 GGIPIQKDIDMLSNSTPNILIGTPGRIIALIRQKKLVTEGIAHFVLDECDKCLESLDMRK 213
Query: 211 DVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL 270
DVQEIF TP KQVMMFSAT++KEIR VC+KFMQ+P+EI+VDDE KLTLHGL+Q+Y+KL
Sbjct: 214 DVQEIFMSTPRKKQVMMFSATMTKEIRDVCRKFMQNPVEIFVDDETKLTLHGLLQYYVKL 273
Query: 271 SELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTR 330
E EKNRKLNDLLD L+FNQV+IFVKSVSRA L+KLL EC+FPSICIH+ +SQ+ER++R
Sbjct: 274 GESEKNRKLNDLLDQLEFNQVIIFVKSVSRAQALHKLLTECSFPSICIHAALSQQERISR 333
Query: 331 YKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAIT 390
Y+ FK KRI+VATDL GRGIDIERVNIVINYDMP++ D+YLHRVGRAGRFGTKGLAIT
Sbjct: 334 YQQFKNFEKRIMVATDLFGRGIDIERVNIVINYDMPENTDSYLHRVGRAGRFGTKGLAIT 393
Query: 391 FVSSASDSDILNQV-SKF 407
VSS +DS +LN V S+F
Sbjct: 394 MVSSQTDSQVLNDVQSRF 411
>gi|67623541|ref|XP_668053.1| helicase [Cryptosporidium hominis TU502]
gi|54659242|gb|EAL37829.1| helicase [Cryptosporidium hominis]
gi|323509341|dbj|BAJ77563.1| cgd8_3900 [Cryptosporidium parvum]
gi|323510329|dbj|BAJ78058.1| cgd8_3900 [Cryptosporidium parvum]
Length = 427
Score = 540 bits (1390), Expect = e-151, Method: Compositional matrix adjust.
Identities = 256/378 (67%), Positives = 308/378 (81%), Gaps = 3/378 (0%)
Query: 33 GEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKS 92
+ + YV IH+SGFRDF LKPEL+RAI D+GFEHPSEVQHE IP AI G+D++CQAKS
Sbjct: 31 SKVGRGNYVAIHASGFRDFFLKPELIRAIGDAGFEHPSEVQHETIPHAITGVDILCQAKS 90
Query: 93 GMGKTAVFVLSTLQQTEPNPGQVTALVLC--HTRELAYQICHEFERFSTYLPDIKVAVFY 150
GMGKTAVFVLS LQQ P+ +C HTRELA+Q+ +EF+RFS YL ++K V Y
Sbjct: 91 GMGKTAVFVLSILQQLNPDEESKNVECICIGHTRELAFQVKNEFDRFSKYLKNVKPQVVY 150
Query: 151 GGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRR 210
GG+ I+ D+L N P I++GTPGRI+AL R K L + + HF+LDECDK LESLDMR+
Sbjct: 151 GGIPIQKDIDMLSNSTPNILIGTPGRIIALIRQKKLVTEGIAHFVLDECDKCLESLDMRK 210
Query: 211 DVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL 270
DVQEIF TP KQVMMFSAT++KEIR VC+KFMQ+P+EI+VDDE KLTLHGL+Q+Y+KL
Sbjct: 211 DVQEIFMSTPRKKQVMMFSATMTKEIRDVCRKFMQNPVEIFVDDETKLTLHGLLQYYVKL 270
Query: 271 SELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTR 330
E EKNRKLNDLLD L+FNQV+IFVKSVSRA L+KLL EC+FPSICIH+ +SQ+ER++R
Sbjct: 271 GESEKNRKLNDLLDQLEFNQVIIFVKSVSRAQALHKLLTECSFPSICIHAALSQQERISR 330
Query: 331 YKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAIT 390
Y+ FK KRI+VATDL GRGIDIERVNIVINYDMP++ D+YLHRVGRAGRFGTKGLAIT
Sbjct: 331 YQQFKNFEKRIMVATDLFGRGIDIERVNIVINYDMPENTDSYLHRVGRAGRFGTKGLAIT 390
Query: 391 FVSSASDSDILNQV-SKF 407
VSS +DS +LN V S+F
Sbjct: 391 MVSSQTDSQVLNDVQSRF 408
>gi|451855761|gb|EMD69052.1| hypothetical protein COCSADRAFT_31829 [Cochliobolus sativus ND90Pr]
Length = 438
Score = 539 bits (1389), Expect = e-151, Method: Compositional matrix adjust.
Identities = 266/414 (64%), Positives = 321/414 (77%), Gaps = 16/414 (3%)
Query: 9 YEDELLDYEEEDAQAPDSVATKANGEAA-----------KKG-YVGIHSSGFRDFLLKPE 56
+E++L+DY +E+ Q ++ A A KKG YVGIHS+GFRDFLLK E
Sbjct: 3 HEEDLIDYSDEEIQPTEAPANGDAAAAKGGLAAGDAAGDKKGSYVGIHSTGFRDFLLKDE 62
Query: 57 LLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTE--PNPGQ 114
L+RAI D GFEHPSEVQ IPQAILG DV+CQAKSG+GKTAVFVL+TLQQ + P PG
Sbjct: 63 LVRAITDCGFEHPSEVQQVTIPQAILGNDVLCQAKSGLGKTAVFVLATLQQMDEKPEPGV 122
Query: 115 VTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVG 172
T LV+CHTRELAYQI +E+ RF+ +LPD+KV VFYGG ++ +LL N+ P I+VG
Sbjct: 123 ATILVMCHTRELAYQIRNEYNRFAKFLPDVKVGVFYGGTPVQKDIELLSNKDTHPHIIVG 182
Query: 173 TPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATL 232
TPGRI AL RDK L L N++HF+LDECDKML+ DMR DVQ IF+ TP KQVMMFSATL
Sbjct: 183 TPGRINALVRDKHLRLANLKHFVLDECDKMLDQPDMRNDVQSIFRATPQHKQVMMFSATL 242
Query: 233 SKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVV 292
+K++R VCKKFMQ+P+EIYVDDE KLTLHGL Q+Y+KL E EKNRKLNDLLD L+FNQV+
Sbjct: 243 NKDVRVVCKKFMQNPLEIYVDDEKKLTLHGLQQYYVKLDEKEKNRKLNDLLDNLEFNQVI 302
Query: 293 IFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGI 352
IFV+S R +EL+KLL ECNFPS +HSG+SQEER+ RYK FKE RI V+TD+ GRGI
Sbjct: 303 IFVRSTLRCSELDKLLRECNFPSTAVHSGISQEERIKRYKEFKEFQTRICVSTDIFGRGI 362
Query: 353 DIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
D+ER+N+ INYDMPD AD YLHRVGRAGRFGTKGL+I+FVSS D +L + +
Sbjct: 363 DVERINVAINYDMPDKADAYLHRVGRAGRFGTKGLSISFVSSPEDEAVLKSIEE 416
>gi|71021713|ref|XP_761087.1| hypothetical protein UM04940.1 [Ustilago maydis 521]
gi|46100537|gb|EAK85770.1| hypothetical protein UM04940.1 [Ustilago maydis 521]
Length = 542
Score = 539 bits (1389), Expect = e-151, Method: Compositional matrix adjust.
Identities = 259/400 (64%), Positives = 314/400 (78%), Gaps = 31/400 (7%)
Query: 39 GYVGIHSSGFRDFLLKPELLRAIVDSGFE--------------------HP--------S 70
YVGIHS+GFRDFLLKPELLRAI D + +P S
Sbjct: 124 SYVGIHSTGFRDFLLKPELLRAISDLDAQPKPQMLALPLARYLERFQLTNPPDLVRLPIS 183
Query: 71 EVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 130
VQ ECIPQ+ILGMDV+CQAKSGMGKTAVFVL+TLQQ EP G+V+ LVLCHTRELAYQI
Sbjct: 184 TVQQECIPQSILGMDVVCQAKSGMGKTAVFVLATLQQIEPVDGEVSVLVLCHTRELAYQI 243
Query: 131 CHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSL 188
+E+ RF+ Y+PD++ V YGG + ++ +LK++ CP I+VGTPGR+ AL RDK L +
Sbjct: 244 RNEYARFTKYMPDVRTGVIYGGTPVAENQAMLKDKAKCPHILVGTPGRMNALVRDKSLKV 303
Query: 189 KNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPM 248
V+HF++DECDK+LE +DMRRDVQ+IF+ TPH KQVMMFSATL+KE+RP CKKFMQ+P+
Sbjct: 304 SGVKHFVIDECDKILEQVDMRRDVQDIFRATPHHKQVMMFSATLAKEVRPTCKKFMQNPL 363
Query: 249 EIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLL 308
EIYVDDE KLTLHGL QHY++L E KNRKLNDLLD+L+FNQV+IFVKS+SRA EL+KLL
Sbjct: 364 EIYVDDETKLTLHGLQQHYVRLEESAKNRKLNDLLDSLEFNQVIIFVKSISRANELDKLL 423
Query: 309 VECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDS 368
ECNFPSICIH G++QEER+ RY+ FK KRILVATD+ GRGID+ERVN+ I+YD P
Sbjct: 424 RECNFPSICIHGGLAQEERIKRYQQFKNFEKRILVATDIFGRGIDVERVNVSISYDTPTD 483
Query: 369 ADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV-SKF 407
AD+YLHRVGRAGRFGTKGLAI FVSS D+++L Q+ S+F
Sbjct: 484 ADSYLHRVGRAGRFGTKGLAIMFVSSDEDAEVLKQIQSRF 523
>gi|452003765|gb|EMD96222.1| hypothetical protein COCHEDRAFT_1167233 [Cochliobolus
heterostrophus C5]
Length = 438
Score = 539 bits (1389), Expect = e-150, Method: Compositional matrix adjust.
Identities = 266/414 (64%), Positives = 321/414 (77%), Gaps = 16/414 (3%)
Query: 9 YEDELLDYEEEDAQAPDSVATKANGEAA-----------KKG-YVGIHSSGFRDFLLKPE 56
+E++L+DY +E+ Q ++ A A KKG YVGIHS+GFRDFLLK E
Sbjct: 3 HEEDLIDYSDEEIQPTEAPANGGAAAAKGGLAAGDAAGDKKGSYVGIHSTGFRDFLLKDE 62
Query: 57 LLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTE--PNPGQ 114
L+RAI D GFEHPSEVQ IPQAILG DV+CQAKSG+GKTAVFVL+TLQQ + P PG
Sbjct: 63 LVRAITDCGFEHPSEVQQVTIPQAILGNDVLCQAKSGLGKTAVFVLATLQQMDEKPEPGV 122
Query: 115 VTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVG 172
T LV+CHTRELAYQI +E+ RF+ +LPD+KV VFYGG ++ +LL N+ P I+VG
Sbjct: 123 ATILVMCHTRELAYQIRNEYNRFAKFLPDVKVGVFYGGTPVQKDIELLSNKDTHPHIIVG 182
Query: 173 TPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATL 232
TPGRI AL RDK L L N++HF+LDECDKML+ DMR DVQ IF+ TP KQVMMFSATL
Sbjct: 183 TPGRINALVRDKHLRLANLKHFVLDECDKMLDQPDMRNDVQSIFRATPQHKQVMMFSATL 242
Query: 233 SKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVV 292
+K++R VCKKFMQ+P+EIYVDDE KLTLHGL Q+Y+KL E EKNRKLNDLLD L+FNQV+
Sbjct: 243 NKDVRVVCKKFMQNPLEIYVDDEKKLTLHGLQQYYVKLDEKEKNRKLNDLLDNLEFNQVI 302
Query: 293 IFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGI 352
IFV+S R +EL+KLL ECNFPS +HSG+SQEER+ RYK FKE RI V+TD+ GRGI
Sbjct: 303 IFVRSTLRCSELDKLLRECNFPSTAVHSGISQEERIKRYKEFKEFQTRICVSTDIFGRGI 362
Query: 353 DIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
D+ER+N+ INYDMPD AD YLHRVGRAGRFGTKGL+I+FVSS D +L + +
Sbjct: 363 DVERINVAINYDMPDKADAYLHRVGRAGRFGTKGLSISFVSSPDDEAVLKSIEE 416
>gi|237843393|ref|XP_002370994.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii ME49]
gi|211968658|gb|EEB03854.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii ME49]
gi|221481804|gb|EEE20174.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii GT1]
gi|221502304|gb|EEE28037.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii VEG]
Length = 434
Score = 539 bits (1389), Expect = e-150, Method: Compositional matrix adjust.
Identities = 265/409 (64%), Positives = 319/409 (77%), Gaps = 22/409 (5%)
Query: 11 DELLDYEEEDAQ------APDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDS 64
DEL+DYEE++ D V + N YV IH+SGFRDF LKPELLRAI D+
Sbjct: 10 DELVDYEEDEQNDAKEKGVEDVVVGRGN-------YVSIHASGFRDFFLKPELLRAIGDA 62
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ-------TEPNPGQVTA 117
GFEHPSEVQHE IP AI G+DV+CQAKSGMGKTAVFVLS LQQ E N V
Sbjct: 63 GFEHPSEVQHETIPHAITGVDVLCQAKSGMGKTAVFVLSILQQLNLDTSGEEGNTQGVVC 122
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKN--ECPQIVVGTPG 175
L + HTRELA+QI +EF+RFS YL ++K V YGG++I+ + D+LK+ P I++GTPG
Sbjct: 123 LGIAHTRELAFQIKNEFDRFSKYLKNVKCEVVYGGISIQKNIDMLKDAKTTPHILIGTPG 182
Query: 176 RILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKE 235
R+LAL + K L+ + V HF+LDECDK LE LDMR+DVQ IF TP KQVM FSAT++KE
Sbjct: 183 RVLALIKGKHLNAEKVAHFVLDECDKCLEKLDMRKDVQNIFMATPKKKQVMFFSATMNKE 242
Query: 236 IRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFV 295
IR VCK+FMQ P+E+++DDE+KLTLHGL+Q+Y+KL E EKNRKLNDLLD L+FNQV+IFV
Sbjct: 243 IRDVCKRFMQSPVEVFIDDESKLTLHGLLQYYVKLQESEKNRKLNDLLDTLEFNQVIIFV 302
Query: 296 KSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIE 355
KSVSRA L++LL ECNFPSI IH+G+ QEER+ RY+ FK KRI+VATDL GRGIDIE
Sbjct: 303 KSVSRAQALDRLLTECNFPSIAIHAGLDQEERINRYQQFKNFEKRIMVATDLFGRGIDIE 362
Query: 356 RVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
RVNIVINYDMPDS+D+YLHRVGRAGRFGTKGLAITFV+S D+++LN V
Sbjct: 363 RVNIVINYDMPDSSDSYLHRVGRAGRFGTKGLAITFVASQDDTNVLNDV 411
>gi|401412201|ref|XP_003885548.1| hypothetical protein NCLIV_059450 [Neospora caninum Liverpool]
gi|325119967|emb|CBZ55520.1| hypothetical protein NCLIV_059450 [Neospora caninum Liverpool]
Length = 434
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 265/409 (64%), Positives = 319/409 (77%), Gaps = 22/409 (5%)
Query: 11 DELLDYEEEDAQ------APDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDS 64
DEL+DYEE++ D V + N YV IH+SGFRDF LKPELLRAI D+
Sbjct: 10 DELVDYEEDEQNDAKEKGVEDVVVGRGN-------YVSIHASGFRDFFLKPELLRAIGDA 62
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ-------TEPNPGQVTA 117
GFEHPSEVQHE IP AI G+DV+CQAKSGMGKTAVFVLS LQQ E N V
Sbjct: 63 GFEHPSEVQHETIPHAITGVDVLCQAKSGMGKTAVFVLSILQQLNLDASGEEGNTQGVVC 122
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKN--ECPQIVVGTPG 175
L + HTRELA+QI +EF+RFS YL ++K V YGG++I+ + D+LK+ P I++GTPG
Sbjct: 123 LGIAHTRELAFQIKNEFDRFSKYLKNVKCEVVYGGISIQKNIDMLKDPKTTPHILIGTPG 182
Query: 176 RILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKE 235
R+LAL + K L+ + V HF+LDECDK LE LDMR+DVQ IF TP KQVM FSAT++KE
Sbjct: 183 RVLALIKGKHLNAEKVAHFVLDECDKCLEKLDMRKDVQNIFMATPKKKQVMFFSATMNKE 242
Query: 236 IRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFV 295
IR VCK+FMQ P+E+++DDE+KLTLHGL+Q+Y+KL E EKNRKLNDLLD L+FNQV+IFV
Sbjct: 243 IRDVCKRFMQSPVEVFIDDESKLTLHGLLQYYVKLQESEKNRKLNDLLDTLEFNQVIIFV 302
Query: 296 KSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIE 355
KSVSRA L++LL ECNFPSI IH+G+ QEER+ RY+ FK KRI+VATDL GRGIDIE
Sbjct: 303 KSVSRAQALDRLLTECNFPSIAIHAGLDQEERINRYQQFKNFEKRIMVATDLFGRGIDIE 362
Query: 356 RVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
RVNIVINYDMPDS+D+YLHRVGRAGRFGTKGLAITFV+S D+++LN V
Sbjct: 363 RVNIVINYDMPDSSDSYLHRVGRAGRFGTKGLAITFVASQDDTNVLNDV 411
>gi|50309861|ref|XP_454944.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74690098|sp|Q6CM95.1|SUB2_KLULA RecName: Full=ATP-dependent RNA helicase SUB2
gi|49644079|emb|CAH00031.1| KLLA0E21935p [Kluyveromyces lactis]
Length = 437
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 263/422 (62%), Positives = 326/422 (77%), Gaps = 13/422 (3%)
Query: 7 NEYEDELLDYEEEDAQAP-DSVATKANGE---------AAKKG-YVGIHSSGFRDFLLKP 55
+E E++LL+Y + + + D+ AT+ N E + KKG YVGIHS+GF+DFLLKP
Sbjct: 3 HEAEEDLLEYSDNEQEVQVDNKATEVNAEGNGESQAKDSDKKGSYVGIHSTGFKDFLLKP 62
Query: 56 ELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQV 115
EL RAI+D GFEHPSEVQ IPQ+I G DV+CQAKSG+GKTAVFVLSTLQQ +P G+V
Sbjct: 63 ELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQQLDPVQGEV 122
Query: 116 TALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL--KNECPQIVVGT 173
+ +VLC+ RELAYQI +E+ RFS Y+PD+K AVFYGG K DLL K P I+V T
Sbjct: 123 SVVVLCNARELAYQIRNEYLRFSKYMPDVKTAVFYGGTEYKNDIDLLSKKETVPHIIVAT 182
Query: 174 PGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLS 233
PGR+ AL RDK + L +V++F++DECDK+LE LDMRRDVQ+IF+ TP DKQVMMFSATLS
Sbjct: 183 PGRLKALVRDKHIDLSHVKNFVIDECDKVLEELDMRRDVQDIFRATPRDKQVMMFSATLS 242
Query: 234 KEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVI 293
+EIRP+C++F+Q+P+EI+VDDEAKLTLHGL Q+YIKL+E EKNRKL LLD L+FNQV+I
Sbjct: 243 QEIRPICRRFLQNPLEIFVDDEAKLTLHGLQQYYIKLNEKEKNRKLAQLLDDLEFNQVII 302
Query: 294 FVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGID 353
FVKS RA EL KLL NFP+I +H M QEER+ RYK FKE KRI V+TD+ GRGID
Sbjct: 303 FVKSTVRANELTKLLNASNFPAITVHGHMKQEERIARYKAFKEFEKRICVSTDVFGRGID 362
Query: 354 IERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKFMFLLIG 413
IER+N+ INYDMP+ AD YLHRVGRAGRFGTKGLAI+ +SS D +L ++ + + I
Sbjct: 363 IERINLAINYDMPNEADQYLHRVGRAGRFGTKGLAISMISSEDDEQVLAKIQERFDVKIT 422
Query: 414 SF 415
F
Sbjct: 423 EF 424
>gi|156844624|ref|XP_001645374.1| hypothetical protein Kpol_1058p53 [Vanderwaltozyma polyspora DSM
70294]
gi|160358708|sp|A7TJT7.1|SUB22_VANPO RecName: Full=ATP-dependent RNA helicase SUB2-2
gi|156116035|gb|EDO17516.1| hypothetical protein Kpol_1058p53 [Vanderwaltozyma polyspora DSM
70294]
Length = 442
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 262/419 (62%), Positives = 324/419 (77%), Gaps = 6/419 (1%)
Query: 3 ETRDNEYEDELLDYEEEDAQAPDSVATKANG---EAAKKG-YVGIHSSGFRDFLLKPELL 58
E DNE E ++ ++ +V+ A G ++ KKG YVGIHS+GF+DFLLKPEL
Sbjct: 11 EYSDNEQEIQVDATNINESAVDATVSETAEGATTDSEKKGSYVGIHSTGFKDFLLKPELA 70
Query: 59 RAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTAL 118
RAI+D GFEHPSEVQ IPQ+I G DV+CQAKSG+GKTAVFVLSTLQQ +P PG+V+ +
Sbjct: 71 RAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQQLDPVPGEVSVV 130
Query: 119 VLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGR 176
V+C+ RELAYQI +E+ RFS Y+PD+K AVFYGG I +LLKN+ P IVV TPGR
Sbjct: 131 VICNARELAYQIRNEYLRFSKYMPDVKTAVFYGGTPITKDAELLKNKETAPHIVVATPGR 190
Query: 177 ILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEI 236
+ AL RDK + L +V++F++DECDK+LE LDMRRDVQ+IF+ TP DKQVMMFSATLS+EI
Sbjct: 191 LKALVRDKLIDLSHVKNFVIDECDKVLEELDMRRDVQDIFRATPRDKQVMMFSATLSEEI 250
Query: 237 RPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVK 296
RP+C++F+Q+P+EI+VDDEAKLTLHGL Q+YIKL E EKNRKL LLD L+FNQV+IFVK
Sbjct: 251 RPICRRFLQNPLEIFVDDEAKLTLHGLQQYYIKLQENEKNRKLAQLLDDLEFNQVIIFVK 310
Query: 297 SVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIER 356
S RA EL KLL E NFP+I +H M Q ER+ RYK FKE KRI V+TD+ GRGIDIER
Sbjct: 311 STKRANELTKLLNESNFPAITVHGNMKQAERIARYKAFKEFEKRICVSTDVFGRGIDIER 370
Query: 357 VNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKFMFLLIGSF 415
+N+ INYD+ AD YLHRVGRAGRFGTKGLAI+FVSS D ++L ++ + + I F
Sbjct: 371 INLAINYDLTTEADQYLHRVGRAGRFGTKGLAISFVSSPEDEEVLGKIQERFDVKIAEF 429
>gi|169624724|ref|XP_001805767.1| hypothetical protein SNOG_15623 [Phaeosphaeria nodorum SN15]
gi|118577978|sp|Q0TXZ2.1|SUB2_PHANO RecName: Full=ATP-dependent RNA helicase SUB2
gi|111055878|gb|EAT76998.1| hypothetical protein SNOG_15623 [Phaeosphaeria nodorum SN15]
Length = 438
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 270/425 (63%), Positives = 321/425 (75%), Gaps = 20/425 (4%)
Query: 9 YEDELLDYEEEDAQAPD-------------SVATKANGEAAKKG-YVGIHSSGFRDFLLK 54
+E++L+DY +E+ Q + A A+GE KKG YVGIHS+GFRDFLLK
Sbjct: 3 HEEDLIDYSDEEIQPTEVPANGDAAAAKGGLAAPDASGE--KKGSYVGIHSTGFRDFLLK 60
Query: 55 PELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTE--PNP 112
EL+RAI D GFEHPSEVQ IPQAILG DV+CQAKSG+GKTAVFVL+TLQQ + P P
Sbjct: 61 DELVRAITDCGFEHPSEVQQVTIPQAILGNDVLCQAKSGLGKTAVFVLATLQQMDEKPEP 120
Query: 113 GQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIV 170
G + LV+CHTRELAYQI +E+ RF+ +LPD+KV VFYGG + +LL N+ P I+
Sbjct: 121 GVASILVMCHTRELAYQIRNEYNRFAKFLPDVKVGVFYGGTPVAKDIELLSNKDTHPHII 180
Query: 171 VGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSA 230
VGTPGRI AL RD+ L L N++HF+LDECDKML+ DMR DVQ IF+ TP KQVMMFSA
Sbjct: 181 VGTPGRINALVRDRHLRLANLKHFVLDECDKMLDQPDMRNDVQAIFRATPAHKQVMMFSA 240
Query: 231 TLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQ 290
TLSKEIR VCKKFMQ+P+EIYVDDE KLTLHGL Q Y+KL E EKNRKLNDLLD L+FNQ
Sbjct: 241 TLSKEIRAVCKKFMQNPLEIYVDDEKKLTLHGLQQFYVKLDEREKNRKLNDLLDNLEFNQ 300
Query: 291 VVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGR 350
V+IFV+S R EL+KLL ECNFPS +HSG+ QEER+ RYK FKE RI V+TD+ GR
Sbjct: 301 VIIFVRSTLRCTELDKLLRECNFPSTAVHSGIGQEERIKRYKEFKEFQTRICVSTDIFGR 360
Query: 351 GIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKFMFL 410
GID+ER+N+ INYDMPD AD YLHRVGRAGRFGTKGL+I+FVSS D +L + +
Sbjct: 361 GIDVERINVAINYDMPDKADAYLHRVGRAGRFGTKGLSISFVSSQDDEAVLKAIEERFAA 420
Query: 411 LIGSF 415
I F
Sbjct: 421 EIPEF 425
>gi|398397223|ref|XP_003852069.1| hypothetical protein MYCGRDRAFT_104368 [Zymoseptoria tritici
IPO323]
gi|339471950|gb|EGP87045.1| hypothetical protein MYCGRDRAFT_104368 [Zymoseptoria tritici
IPO323]
Length = 457
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 261/427 (61%), Positives = 327/427 (76%), Gaps = 32/427 (7%)
Query: 10 EDELLDYEEEDAQAPDSV--ATKANGEA-------------AKKGYVGIHSSGFRDFLLK 54
E++L+DY +E+ Q ++ A ANGEA AK YVGIHS+ FRDFLLK
Sbjct: 5 EEDLIDYSDEELQPNEATTGAVGANGEAKKGDLSANGGADKAKGSYVGIHSTSFRDFLLK 64
Query: 55 PELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQ 114
PELL+AI D GFEHPSEVQ CIPQAILG DV+CQAKSG+GKTAVFVLSTLQQ EP G+
Sbjct: 65 PELLKAITDCGFEHPSEVQQNCIPQAILGTDVLCQAKSGLGKTAVFVLSTLQQMEPVNGE 124
Query: 115 VTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVG 172
V+ LVLCHTRELA+QI +E+ RFS Y+P++K VFYGG +IK ++ LLKN+ P I+V
Sbjct: 125 VSVLVLCHTRELAFQIKNEYIRFSKYMPEVKTEVFYGGTDIKENEKLLKNKETHPHIIVA 184
Query: 173 TPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATL 232
TPGR+ AL R+K L L +V+ F+LDECDKML+ +DMRRDVQEIF+ TP KQVMMFSATL
Sbjct: 185 TPGRLNALVREKKLRLGSVQRFVLDECDKMLDQIDMRRDVQEIFRATPPQKQVMMFSATL 244
Query: 233 SKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVV 292
S+ +RP+CKKFMQ P+E+++DDE KL+LHGL Q+Y+ E EKNR+LNDLLD L +NQV+
Sbjct: 245 SQAVRPICKKFMQTPLELFIDDEKKLSLHGLQQYYLNSKEDEKNRRLNDLLDELTYNQVI 304
Query: 293 IFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGI 352
IFVK+ +RA EL++LL ECNFPSI ++ ++QEER+ RY+ FK +KRI V+TD+ GRGI
Sbjct: 305 IFVKTSNRAIELDRLLRECNFPSIAVYGHLNQEERIKRYQAFKNYDKRICVSTDVFGRGI 364
Query: 353 DIERVNIVINYDMPDS---------------ADTYLHRVGRAGRFGTKGLAITFVSSASD 397
DIER+N+ INYDMPDS ADTYLHRVGRAGRFGTKG++I+FVSS D
Sbjct: 365 DIERINLAINYDMPDSPTNPGATDKETLNQAADTYLHRVGRAGRFGTKGVSISFVSSERD 424
Query: 398 SDILNQV 404
++L +
Sbjct: 425 MEVLKAI 431
>gi|66826121|ref|XP_646415.1| DEAD/DEAH box helicase [Dictyostelium discoideum AX4]
gi|60474379|gb|EAL72316.1| DEAD/DEAH box helicase [Dictyostelium discoideum AX4]
Length = 428
Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust.
Identities = 256/385 (66%), Positives = 311/385 (80%), Gaps = 2/385 (0%)
Query: 25 DSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGM 84
D TK +V +HSSGFR+FLLKPEL R I D GFEHPSEVQ+ECIPQAILG
Sbjct: 27 DVTDTKNKTANRADTHVAMHSSGFREFLLKPELERVIGDCGFEHPSEVQNECIPQAILGT 86
Query: 85 DVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDI 144
DVICQAKSGMGKTAVFVLSTLQQ + NP +T LVLC+TRELAYQIC EF+RF+ YLP++
Sbjct: 87 DVICQAKSGMGKTAVFVLSTLQQIDNNPNGITTLVLCNTRELAYQICDEFDRFTKYLPNV 146
Query: 145 KVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLE 204
K AV YGG+ ++ HKDL+K + P I++GTPGRIL LA + LSLK ++ FILDECD MLE
Sbjct: 147 KTAVIYGGIPVQTHKDLIKEKKPNIIIGTPGRILQLASEGALSLKEIKQFILDECDTMLE 206
Query: 205 SLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLV 264
SLDMR+DVQ+IFK+ P +KQVMMFSATLS IRP+CKKFM +P+EIY++D +KLTLHGL
Sbjct: 207 SLDMRKDVQKIFKLIPANKQVMMFSATLSDTIRPICKKFMNNPLEIYINDGSKLTLHGLQ 266
Query: 265 QHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQ 324
Q+Y+ ++E +KN+KL +LLD+LDFNQ VIFVKSV RA LNK+L + FPSICIH + Q
Sbjct: 267 QYYVPITEEQKNKKLIELLDSLDFNQAVIFVKSVRRADALNKILQDIGFPSICIHRDLDQ 326
Query: 325 EERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGT 384
++R+ +Y+ FK RI+VAT++ GRGIDIERVN+VINYDM +SADTYLHRVGRAGRFGT
Sbjct: 327 KDRIEQYRKFKNFESRIMVATNIFGRGIDIERVNVVINYDMAESADTYLHRVGRAGRFGT 386
Query: 385 KGLAITFVSSASDSDILNQV-SKFM 408
KGLAI+FV S D +L QV SKF+
Sbjct: 387 KGLAISFVPSKEDP-VLEQVQSKFV 410
>gi|401626423|gb|EJS44370.1| sub2p [Saccharomyces arboricola H-6]
Length = 446
Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust.
Identities = 256/396 (64%), Positives = 312/396 (78%), Gaps = 3/396 (0%)
Query: 23 APDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAI 81
APD KKG YVGIHS+GF+DFLLKPEL RAI+D GFEHPSEVQ IPQ+I
Sbjct: 38 APDGDDNNNTAAGDKKGSYVGIHSTGFKDFLLKPELSRAIIDCGFEHPSEVQQHTIPQSI 97
Query: 82 LGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYL 141
G DV+CQAKSG+GKTAVFVLSTLQQ +P PG+V +V+C+ RELAYQI +E+ RFS Y+
Sbjct: 98 HGTDVLCQAKSGLGKTAVFVLSTLQQLDPVPGEVAVVVICNARELAYQIRNEYLRFSKYM 157
Query: 142 PDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDEC 199
PD+K AVFYGG I +LLKN+ P IVV TPGR+ AL R+K + L +V++F++DEC
Sbjct: 158 PDVKTAVFYGGTPISKDAELLKNKDTAPHIVVATPGRLKALVREKYIDLSHVKNFVIDEC 217
Query: 200 DKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLT 259
DK+LE LDMRRDVQEIF+ TP DKQVMMFSATLS+EIRP+C++F+Q+P+EI+VDDEAKLT
Sbjct: 218 DKVLEELDMRRDVQEIFRATPRDKQVMMFSATLSQEIRPICRRFLQNPLEIFVDDEAKLT 277
Query: 260 LHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIH 319
LHGL Q+YIKL E EKNRKL LLD L+FNQV+IFVKS +RA EL KLL NFP+I +H
Sbjct: 278 LHGLQQYYIKLEEREKNRKLAQLLDDLEFNQVIIFVKSTTRANELTKLLNASNFPAITVH 337
Query: 320 SGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRA 379
M QEER+ RYK FK+ KRI V+TD+ GRGIDIER+N+ INYD+ + AD YLHRVGRA
Sbjct: 338 GHMKQEERIARYKAFKDFEKRICVSTDVFGRGIDIERINLAINYDLTNEADQYLHRVGRA 397
Query: 380 GRFGTKGLAITFVSSASDSDILNQVSKFMFLLIGSF 415
GRFGTKGLAI+FVSS D ++L ++ + + I F
Sbjct: 398 GRFGTKGLAISFVSSKEDEEVLAKIQERFDVKIAEF 433
>gi|365761668|gb|EHN03306.1| Sub2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401840144|gb|EJT43052.1| SUB2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 446
Score = 536 bits (1380), Expect = e-150, Method: Compositional matrix adjust.
Identities = 264/423 (62%), Positives = 325/423 (76%), Gaps = 10/423 (2%)
Query: 3 ETRDNEYEDEL-----LDYEEEDAQAPDSVATKANGEAA--KKG-YVGIHSSGFRDFLLK 54
E DNE E ++ ++ E A A + N AA KKG YVGIHS+GF+DFLLK
Sbjct: 11 EYSDNEQEIQIDASKAVEVGETGAAASATDGDDNNNTAAGDKKGSYVGIHSTGFKDFLLK 70
Query: 55 PELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQ 114
PEL RAI+D GFEHPSEVQ IPQ+I G DV+CQAKSG+GKTAVFVLSTLQQ +P PG+
Sbjct: 71 PELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQQLDPVPGE 130
Query: 115 VTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVG 172
V +V+C+ RELAYQI +E+ RFS Y+PD+K AVFYGG I +LLKN+ P IVV
Sbjct: 131 VAVVVICNARELAYQIRNEYLRFSKYMPDVKTAVFYGGTPISKDAELLKNKDTAPHIVVA 190
Query: 173 TPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATL 232
TPGR+ AL R+K + L +V++F++DECDK+LE LDMRRDVQEIF+ TP DKQVMMFSATL
Sbjct: 191 TPGRLKALVREKYIDLSHVKNFVIDECDKVLEELDMRRDVQEIFRATPRDKQVMMFSATL 250
Query: 233 SKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVV 292
S+EIRP+C++F+Q+P+EI+VDDEAKLTLHGL Q+YIKL E EKNRKL LLD L+FNQV+
Sbjct: 251 SQEIRPICRRFLQNPLEIFVDDEAKLTLHGLQQYYIKLEEREKNRKLAQLLDDLEFNQVI 310
Query: 293 IFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGI 352
IFVKS +RA EL KLL NFP+I +H M QEER+ RYK FK+ KRI V+TD+ GRGI
Sbjct: 311 IFVKSTTRANELTKLLNASNFPAITVHGHMKQEERIARYKAFKDFEKRICVSTDVFGRGI 370
Query: 353 DIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKFMFLLI 412
DIER+N+ INYD+ + AD YLHRVGRAGRFGTKGLAI+FVSS D ++L ++ + + I
Sbjct: 371 DIERINLAINYDLTNEADQYLHRVGRAGRFGTKGLAISFVSSKEDEEVLAKIQERFDVKI 430
Query: 413 GSF 415
F
Sbjct: 431 AEF 433
>gi|363754107|ref|XP_003647269.1| hypothetical protein Ecym_6049 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890906|gb|AET40452.1| hypothetical protein Ecym_6049 [Eremothecium cymbalariae
DBVPG#7215]
Length = 438
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 262/423 (61%), Positives = 328/423 (77%), Gaps = 14/423 (3%)
Query: 7 NEYEDELLDY--EEEDAQAPDSVATKANG---------EAAKKG-YVGIHSSGFRDFLLK 54
+E E++LL+Y E++ Q ++ + +A G + KKG YVGIHS+GF+DFLLK
Sbjct: 3 HEGEEDLLEYSDNEQEIQVENTKSAEAVGGVEESGEGKDTDKKGSYVGIHSTGFKDFLLK 62
Query: 55 PELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQ 114
PEL RAI+D GFEHPSEVQ IPQ+I G DV+CQAKSG+GKTAVFVLSTLQQ +P G+
Sbjct: 63 PELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQQLDPVAGE 122
Query: 115 VTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVG 172
V+ +VLC+ RELAYQI +E+ RFS Y+PD+K AVFYGG + + +LLKN+ P IVV
Sbjct: 123 VSVVVLCNARELAYQIRNEYLRFSKYMPDVKTAVFYGGTDTRKDIELLKNKETAPHIVVA 182
Query: 173 TPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATL 232
TPGR+ AL RD ++ L +V++F++DECDK+LE LDMRRDVQ+IF+ TP DKQVMMFSATL
Sbjct: 183 TPGRLKALVRDNNIDLSHVKNFVIDECDKVLEELDMRRDVQDIFRATPRDKQVMMFSATL 242
Query: 233 SKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVV 292
S+EIRP+C++F+Q+P+EI+VDDEAKLTLHGL Q+YIKL E EKNRKL LLD L+FNQV+
Sbjct: 243 SQEIRPICRRFLQNPLEIFVDDEAKLTLHGLQQYYIKLEEREKNRKLAQLLDDLEFNQVI 302
Query: 293 IFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGI 352
IFVKS RA EL KLL NFP+I +H M QE+R+ RYK FKE KRI V+TD+ GRGI
Sbjct: 303 IFVKSTLRANELTKLLNASNFPAITVHGHMKQEKRIARYKAFKEFEKRICVSTDVFGRGI 362
Query: 353 DIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKFMFLLI 412
DIER+N+ INYDMP AD YLHRVGRAGRFGTKGLAI+ VSS D +IL ++ + + I
Sbjct: 363 DIERINLAINYDMPSEADQYLHRVGRAGRFGTKGLAISLVSSKEDEEILAKIQERFDVKI 422
Query: 413 GSF 415
F
Sbjct: 423 TEF 425
>gi|367003483|ref|XP_003686475.1| hypothetical protein TPHA_0G02050 [Tetrapisispora phaffii CBS 4417]
gi|357524776|emb|CCE64041.1| hypothetical protein TPHA_0G02050 [Tetrapisispora phaffii CBS 4417]
Length = 438
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 261/426 (61%), Positives = 327/426 (76%), Gaps = 20/426 (4%)
Query: 7 NEYEDELLDY--EEEDAQAPDSVATKA-------------NGEAAKKGYVGIHSSGFRDF 51
+E E++LL+Y E+D Q VA KA GE K YVGIHS+GF+DF
Sbjct: 3 HEGEEDLLEYSDNEQDIQV---VADKAAENTETATADEGVEGEDKKGSYVGIHSTGFKDF 59
Query: 52 LLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPN 111
LLKPEL RAI+D GFEHPSEVQ IPQ+I G DV+CQAKSG+GKTAVFVLSTLQQ +P
Sbjct: 60 LLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQQLDPV 119
Query: 112 PGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQI 169
PG+V+ +V+C+ RELAYQI +E+ RFS Y+P++K AVFYGG IK DLLKN+ PQI
Sbjct: 120 PGEVSVVVICNARELAYQIRNEYLRFSKYMPEVKTAVFYGGTPIKNDADLLKNKETAPQI 179
Query: 170 VVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFS 229
+V TPGR+ AL RDK + L +V++F++DECDK+LE LDMRRDVQ+IF+ TP DKQVMMFS
Sbjct: 180 IVATPGRLKALVRDKLIDLSHVKNFVIDECDKVLEELDMRRDVQDIFRATPRDKQVMMFS 239
Query: 230 ATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFN 289
ATLS++IRP+C++F+Q+P+EI+VDDEAKLTLHGL Q+YIK+ E EKNRKL LLD L+FN
Sbjct: 240 ATLSEDIRPICRRFLQNPLEIFVDDEAKLTLHGLQQYYIKIEEREKNRKLAQLLDDLEFN 299
Query: 290 QVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVG 349
QV+IFVKS RA EL KLL + NFP+I +H M Q ER+ RYK FK+ KRI V+TD+ G
Sbjct: 300 QVIIFVKSTKRANELTKLLNDSNFPAITVHGHMKQAERIARYKAFKDFEKRICVSTDVFG 359
Query: 350 RGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKFMF 409
RGIDIER+N+ INYD+ AD YLHRVGRAGRFGTKGLA++FVSS D ++L ++ +
Sbjct: 360 RGIDIERINLAINYDLTTEADQYLHRVGRAGRFGTKGLAVSFVSSPEDEEVLGKIQERFD 419
Query: 410 LLIGSF 415
+ I +
Sbjct: 420 VKIAEY 425
>gi|403213746|emb|CCK68248.1| hypothetical protein KNAG_0A05850 [Kazachstania naganishii CBS
8797]
Length = 449
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 253/382 (66%), Positives = 310/382 (81%), Gaps = 3/382 (0%)
Query: 37 KKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMG 95
KKG YVGIHS+GF+DFLLKPEL RAI+D GFEHPSEVQ IPQ+I G DV+CQAKSG+G
Sbjct: 55 KKGSYVGIHSTGFKDFLLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLG 114
Query: 96 KTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNI 155
KTAVFVLSTLQQ +P PG+V+ +V+C+ RELAYQI +E+ RFS Y+PD+K AVFYGG I
Sbjct: 115 KTAVFVLSTLQQLDPIPGEVSVVVICNARELAYQIRNEYLRFSKYMPDVKTAVFYGGTPI 174
Query: 156 KIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQ 213
+LLKN+ P IVV TPGR+ AL RDK + L +V++F++DECDK+LE LDMRRDVQ
Sbjct: 175 NKDAELLKNKETSPHIVVATPGRLKALVRDKMIDLSHVKNFVIDECDKVLEELDMRRDVQ 234
Query: 214 EIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEL 273
+IF+ TP DKQVMMFSATLS+EIRP+C++F+Q+P+EI+VDDEAKLTLHGL Q+Y KL E
Sbjct: 235 DIFRATPRDKQVMMFSATLSQEIRPICRRFLQNPLEIFVDDEAKLTLHGLQQYYTKLEER 294
Query: 274 EKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKG 333
EKNRKL LLD L+FNQV+IFVKS +RA EL KLL E NFP+I +H M QEER+ RYK
Sbjct: 295 EKNRKLAQLLDDLEFNQVIIFVKSTNRANELTKLLNESNFPAITVHGHMKQEERIARYKA 354
Query: 334 FKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
FK+ KRI V+TD+ GRGIDIER+N+ INYD+P AD YLHRVGRAGRFGTKGLAI+F+S
Sbjct: 355 FKDFEKRICVSTDVFGRGIDIERINLAINYDLPSEADQYLHRVGRAGRFGTKGLAISFIS 414
Query: 394 SASDSDILNQVSKFMFLLIGSF 415
S D ++L ++ + + I F
Sbjct: 415 SKEDEEVLAKIQERFDVKITEF 436
>gi|449298576|gb|EMC94591.1| hypothetical protein BAUCODRAFT_35821 [Baudoinia compniacensis UAMH
10762]
Length = 455
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 258/429 (60%), Positives = 317/429 (73%), Gaps = 34/429 (7%)
Query: 10 EDELLDYEEE-----------------DAQAPDSVATKANGEAAKKGYVGIHSSGFRDFL 52
E++L+DY +E DA+ D T A K YVGIHS+ FRD L
Sbjct: 4 EEDLIDYSDEEIAPTDGAAATGAATNGDAKKGDLTVTGAGAAQGKGSYVGIHSTSFRDLL 63
Query: 53 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNP 112
LKPE+++AI D GFEHPSEVQ CIPQAI+G DV+CQAKSG+GKTAVFV+STLQQ + P
Sbjct: 64 LKPEIMKAITDCGFEHPSEVQQVCIPQAIVGTDVLCQAKSGLGKTAVFVISTLQQIDVVP 123
Query: 113 GQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL--KNECPQIV 170
G+ + LV+CHTRELA+QI +E+ RF+ Y+PD+K AVFYGG +IK ++ LL K P I+
Sbjct: 124 GEASVLVMCHTRELAFQIKNEYNRFTKYMPDVKTAVFYGGTDIKENEKLLSSKETYPNII 183
Query: 171 VGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSA 230
V TPGR+ AL R+K L L V+ F+LDECDKML+ +DMRRDVQEIF+ TP +KQVMMFSA
Sbjct: 184 VATPGRLNALVREKKLRLGTVKFFVLDECDKMLDQIDMRRDVQEIFRATPTNKQVMMFSA 243
Query: 231 TLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQ 290
TLS+ RP+CKKFM++P+EIYVDDE KLTLHGL Q Y KLSE EKNR+LNDLLD + FNQ
Sbjct: 244 TLSQATRPICKKFMRNPLEIYVDDETKLTLHGLRQFYCKLSESEKNRRLNDLLDEVTFNQ 303
Query: 291 VVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGR 350
V+IFVKS RA EL KLL+ECNFP+ +HSG+SQEER+ RY+ FK RI V+TD+ GR
Sbjct: 304 VIIFVKSTVRANELAKLLIECNFPATAVHSGISQEERIKRYQEFKAFKHRICVSTDVFGR 363
Query: 351 GIDIERVNIVINYDMPDS---------------ADTYLHRVGRAGRFGTKGLAITFVSSA 395
GIDIER+N+ +NYDMPDS ADTYLHRVGRAGRFGTKG+A++FVSS
Sbjct: 364 GIDIERINMAVNYDMPDSPQNPGSSDKESLAQAADTYLHRVGRAGRFGTKGVAVSFVSSE 423
Query: 396 SDSDILNQV 404
D +L +
Sbjct: 424 RDEAVLKAI 432
>gi|403223084|dbj|BAM41215.1| DEAD-box family helicase [Theileria orientalis strain Shintoku]
Length = 453
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 265/429 (61%), Positives = 323/429 (75%), Gaps = 31/429 (7%)
Query: 7 NEYEDELLDYEEEDAQAPDSVATK------------ANGEAAKKGYVGIHSSGFRDFLLK 54
N ++L+DYEEE+ ++ VATK A+G + YV IH+SGFRDF LK
Sbjct: 6 NVATEDLVDYEEEEGES--KVATKDVIKSAGGKKSKADGTMGRGSYVAIHASGFRDFFLK 63
Query: 55 PELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNP-- 112
PE+LRAI D+GFEHPSEVQHE IP AI G+D++CQAKSGMGKTAVFVLS LQQ + +
Sbjct: 64 PEILRAISDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLDVDADE 123
Query: 113 -------------GQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHK 159
+V+ + + HTRELA+QI +EF+RFS YLP ++ V YGGV I+
Sbjct: 124 PVKRDAQDNLRPISRVSCVGISHTRELAFQIKNEFDRFSKYLPSVRCEVVYGGVPIQKDV 183
Query: 160 DLLKN--ECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFK 217
+LK+ + P I+VGTPGR+LAL + K L++ +VRHF+LDECDK LE LDMR+DVQ IF
Sbjct: 184 AMLKDPEKMPHILVGTPGRLLALVKGKHLNMDSVRHFVLDECDKCLEKLDMRQDVQSIFM 243
Query: 218 MTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNR 277
TP KQVM FSAT++ E+R +CK+FMQ P+E++VDDE+KLTLHGL+Q+Y+KLSE KNR
Sbjct: 244 ATPKKKQVMFFSATMTPEVRELCKRFMQSPVEVFVDDESKLTLHGLLQYYVKLSESVKNR 303
Query: 278 KLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEG 337
KLNDLLD L+FNQV+IFVKSVSRA LN LL ECNFPSI IH+G+ Q ER++RY FK
Sbjct: 304 KLNDLLDTLEFNQVIIFVKSVSRAVTLNNLLTECNFPSIAIHAGLDQSERISRYTQFKNF 363
Query: 338 NKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASD 397
+KRILVATDL GRGID+ERVNIVINYDMPDS D+YLHRVGRAGRFGTKGLAITFVSS D
Sbjct: 364 DKRILVATDLFGRGIDVERVNIVINYDMPDSTDSYLHRVGRAGRFGTKGLAITFVSSPED 423
Query: 398 SDILNQVSK 406
S L V K
Sbjct: 424 SSALADVQK 432
>gi|160358710|sp|A6ZXP4.1|SUB2_YEAS7 RecName: Full=ATP-dependent RNA helicase SUB2; AltName:
Full=Suppressor of BRR1 protein 2
gi|151941918|gb|EDN60274.1| ATP-dependent RNA helicase [Saccharomyces cerevisiae YJM789]
gi|190405090|gb|EDV08357.1| ATP-dependent RNA helicase SUB2 [Saccharomyces cerevisiae RM11-1a]
gi|207346988|gb|EDZ73314.1| YDL084Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256274096|gb|EEU09007.1| Sub2p [Saccharomyces cerevisiae JAY291]
gi|323305707|gb|EGA59447.1| Sub2p [Saccharomyces cerevisiae FostersB]
gi|323309539|gb|EGA62749.1| Sub2p [Saccharomyces cerevisiae FostersO]
gi|323334342|gb|EGA75723.1| Sub2p [Saccharomyces cerevisiae AWRI796]
gi|323349458|gb|EGA83682.1| Sub2p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355848|gb|EGA87661.1| Sub2p [Saccharomyces cerevisiae VL3]
gi|365766459|gb|EHN07955.1| Sub2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 446
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 256/389 (65%), Positives = 312/389 (80%), Gaps = 5/389 (1%)
Query: 32 NGEAA--KKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVIC 88
N AA KKG YVGIHS+GF+DFLLKPEL RAI+D GFEHPSEVQ IPQ+I G DV+C
Sbjct: 45 NNAAAGDKKGSYVGIHSTGFKDFLLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLC 104
Query: 89 QAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAV 148
QAKSG+GKTAVFVLSTLQQ +P PG+V +V+C+ RELAYQI +E+ RFS Y+PD+K AV
Sbjct: 105 QAKSGLGKTAVFVLSTLQQLDPVPGEVAVVVICNARELAYQIRNEYLRFSKYMPDVKTAV 164
Query: 149 FYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESL 206
FYGG I +LLKN+ P IVV TPGR+ AL R+K + L +V++F++DECDK+LE L
Sbjct: 165 FYGGTPISKDAELLKNKDTAPHIVVATPGRLKALVREKYIDLSHVKNFVIDECDKVLEEL 224
Query: 207 DMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQH 266
DMRRDVQEIF+ TP DKQVMMFSATLS+EIRP+C++F+Q+P+EI+VDDEAKLTLHGL Q+
Sbjct: 225 DMRRDVQEIFRATPRDKQVMMFSATLSQEIRPICRRFLQNPLEIFVDDEAKLTLHGLQQY 284
Query: 267 YIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEE 326
YIKL E EKNRKL LLD L+FNQV+IFVKS +RA EL KLL NFP+I +H M QEE
Sbjct: 285 YIKLEEREKNRKLAQLLDDLEFNQVIIFVKSTTRANELTKLLNASNFPAITVHGHMKQEE 344
Query: 327 RLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKG 386
R+ RYK FK+ KRI V+TD+ GRGIDIER+N+ INYD+ + AD YLHRVGRAGRFGTKG
Sbjct: 345 RIARYKAFKDFEKRICVSTDVFGRGIDIERINLAINYDLTNEADQYLHRVGRAGRFGTKG 404
Query: 387 LAITFVSSASDSDILNQVSKFMFLLIGSF 415
LAI+FVSS D ++L ++ + + I F
Sbjct: 405 LAISFVSSKEDEEVLAKIQERFDVKIAEF 433
>gi|6320119|ref|NP_010199.1| Sub2p [Saccharomyces cerevisiae S288c]
gi|2500534|sp|Q07478.1|SUB2_YEAST RecName: Full=ATP-dependent RNA helicase SUB2; AltName:
Full=Suppressor of BRR1 protein 2
gi|1431108|emb|CAA98650.1| SUB2 [Saccharomyces cerevisiae]
gi|51013265|gb|AAT92926.1| YDL084W [Saccharomyces cerevisiae]
gi|285810951|tpg|DAA11775.1| TPA: Sub2p [Saccharomyces cerevisiae S288c]
gi|349576996|dbj|GAA22165.1| K7_Sub2p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392300033|gb|EIW11124.1| Sub2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 446
Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust.
Identities = 256/389 (65%), Positives = 312/389 (80%), Gaps = 5/389 (1%)
Query: 32 NGEAA--KKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVIC 88
N AA KKG YVGIHS+GF+DFLLKPEL RAI+D GFEHPSEVQ IPQ+I G DV+C
Sbjct: 45 NNTAAGDKKGSYVGIHSTGFKDFLLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLC 104
Query: 89 QAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAV 148
QAKSG+GKTAVFVLSTLQQ +P PG+V +V+C+ RELAYQI +E+ RFS Y+PD+K AV
Sbjct: 105 QAKSGLGKTAVFVLSTLQQLDPVPGEVAVVVICNARELAYQIRNEYLRFSKYMPDVKTAV 164
Query: 149 FYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESL 206
FYGG I +LLKN+ P IVV TPGR+ AL R+K + L +V++F++DECDK+LE L
Sbjct: 165 FYGGTPISKDAELLKNKDTAPHIVVATPGRLKALVREKYIDLSHVKNFVIDECDKVLEEL 224
Query: 207 DMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQH 266
DMRRDVQEIF+ TP DKQVMMFSATLS+EIRP+C++F+Q+P+EI+VDDEAKLTLHGL Q+
Sbjct: 225 DMRRDVQEIFRATPRDKQVMMFSATLSQEIRPICRRFLQNPLEIFVDDEAKLTLHGLQQY 284
Query: 267 YIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEE 326
YIKL E EKNRKL LLD L+FNQV+IFVKS +RA EL KLL NFP+I +H M QEE
Sbjct: 285 YIKLEEREKNRKLAQLLDDLEFNQVIIFVKSTTRANELTKLLNASNFPAITVHGHMKQEE 344
Query: 327 RLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKG 386
R+ RYK FK+ KRI V+TD+ GRGIDIER+N+ INYD+ + AD YLHRVGRAGRFGTKG
Sbjct: 345 RIARYKAFKDFEKRICVSTDVFGRGIDIERINLAINYDLTNEADQYLHRVGRAGRFGTKG 404
Query: 387 LAITFVSSASDSDILNQVSKFMFLLIGSF 415
LAI+FVSS D ++L ++ + + I F
Sbjct: 405 LAISFVSSKEDEEVLAKIQERFDVKIAEF 433
>gi|452846565|gb|EME48497.1| hypothetical protein DOTSEDRAFT_67510 [Dothistroma septosporum
NZE10]
Length = 461
Score = 533 bits (1372), Expect = e-149, Method: Compositional matrix adjust.
Identities = 261/433 (60%), Positives = 322/433 (74%), Gaps = 38/433 (8%)
Query: 10 EDELLDYEEEDAQAPD-------------------SVATKANGEAAKKG-YVGIHSSGFR 49
E++L+DY +E+ Q D ++ +G A KG YVGI+S+ FR
Sbjct: 5 EEDLIDYSDEELQPTDGATATGAPGAAANGDAKKGDLSVSGSGAAQAKGSYVGINSASFR 64
Query: 50 DFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTE 109
DFLLKPELL+AI D GFEHPSEVQ CIPQAILG DV+CQAKSG+GKTAVFVLSTLQQ E
Sbjct: 65 DFLLKPELLKAITDCGFEHPSEVQQVCIPQAILGTDVLCQAKSGLGKTAVFVLSTLQQIE 124
Query: 110 PNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CP 167
P G+ + LV+CHTRELA+QI +E+ RFS Y+P++K AVFYGG +I K LLK++ P
Sbjct: 125 PVAGEASVLVMCHTRELAFQIKNEYARFSKYMPEVKTAVFYGGTDINKDKALLKDKETHP 184
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
I+V TPGR+ L R+K L L +V F+LDECDKML+ +DMRRDVQEIF+ TP KQVMM
Sbjct: 185 HIIVATPGRLNGLVREKALRLGSVSRFVLDECDKMLDQIDMRRDVQEIFRATPTQKQVMM 244
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSATLS+ RP+CKKFMQ+P+EIYVDDE KLTLHGL Q+YIK E EKNRKLNDLLD L
Sbjct: 245 FSATLSQATRPICKKFMQNPLEIYVDDEEKLTLHGLQQYYIKCDEGEKNRKLNDLLDTLQ 304
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
+NQV+IFVK+ R EL++LL ECNFPSI +HSG+SQEER+ RY+ FK +KRI V+TD+
Sbjct: 305 YNQVIIFVKNTLRCGELDRLLRECNFPSIAVHSGVSQEERIKRYQAFKNYDKRICVSTDV 364
Query: 348 VGRGIDIERVNIVINYDMPD----------------SADTYLHRVGRAGRFGTKGLAITF 391
GRGIDIER+N+ INYDMP+ SADTYLHRVGRAGRFGTKG+AI+F
Sbjct: 365 FGRGIDIERINLAINYDMPESVEKGADPEAKDALASSADTYLHRVGRAGRFGTKGVAISF 424
Query: 392 VSSASDSDILNQV 404
V++ D ++ ++
Sbjct: 425 VTNDRDKKVIAEI 437
>gi|281202577|gb|EFA76779.1| DEAD/DEAH box helicase [Polysphondylium pallidum PN500]
Length = 426
Score = 533 bits (1372), Expect = e-149, Method: Compositional matrix adjust.
Identities = 256/403 (63%), Positives = 319/403 (79%), Gaps = 9/403 (2%)
Query: 11 DELLDYEEEDAQAPDSVATKANGE----AAKKGYVGIHSSGFRDFLLKPELLRAIVDSGF 66
+EL +YE+ D D + NG+ +AK +V +HSSGFR+FLLKPEL + I D GF
Sbjct: 10 NELAEYEDSD----DETVQETNGDKKIVSAKDTHVAMHSSGFREFLLKPELDKVIGDCGF 65
Query: 67 EHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTREL 126
EHPSEVQ+ECIPQAILG D+ICQAKSGMGKTAVFVLS LQQ + NP V AL+LCHTREL
Sbjct: 66 EHPSEVQNECIPQAILGHDIICQAKSGMGKTAVFVLSVLQQIDINPTGVVALILCHTREL 125
Query: 127 AYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDL 186
AYQIC EF+RF+ Y+ +K AV YGG+ ++ KD+L++ P IV+GTPGR+L LA + L
Sbjct: 126 AYQICDEFDRFTKYMSTVKTAVIYGGMPVQTQKDMLRDRQPNIVIGTPGRVLQLASEHSL 185
Query: 187 SLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQD 246
+LK+++HFILDECD +LESLDMR+D+Q+I+K+T KQVMMFSATLS +IR VCKKFM
Sbjct: 186 NLKSIKHFILDECDSLLESLDMRKDIQKIYKLTSPTKQVMMFSATLSDQIRGVCKKFMHV 245
Query: 247 PMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNK 306
P EIY++D +KLTLHGL Q+Y+KL+E +KNRKL DLLD+LDFNQVVIFVKSV RA LN
Sbjct: 246 PFEIYINDGSKLTLHGLQQYYVKLTEDQKNRKLVDLLDSLDFNQVVIFVKSVERAKALNS 305
Query: 307 LLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMP 366
+L E F SICIH + Q ER+ +Y+ FK R++VAT++ GRGIDIERVN+VINYDM
Sbjct: 306 ILSEVGFASICIHRDLKQPERIEQYRKFKNFQSRVMVATNIFGRGIDIERVNVVINYDMA 365
Query: 367 DSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV-SKFM 408
+S DTYLHRVGRAGRFGTKGLAI+F+++A D L+QV SKF+
Sbjct: 366 ESPDTYLHRVGRAGRFGTKGLAISFITAAEDLTTLDQVQSKFV 408
>gi|145356615|ref|XP_001422523.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582766|gb|ABP00840.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 358
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 251/333 (75%), Positives = 286/333 (85%)
Query: 72 VQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 131
VQHECIPQAILGMDV+CQAKSGMGKTAVFV++ LQQ +P PG+V A+V+CHTRELAYQI
Sbjct: 3 VQHECIPQAILGMDVLCQAKSGMGKTAVFVITVLQQLDPVPGEVGAVVMCHTRELAYQIS 62
Query: 132 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 191
HEFERFST+L D+ AV +GG+ I K+ LK + P IVV TPGR+ ALA+D L+LK
Sbjct: 63 HEFERFSTFLGDVTTAVVFGGIPIAQQKEQLKLQPPNIVVATPGRLKALAQDGTLNLKKC 122
Query: 192 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 251
HF+LDECDKMLE++DMR DVQEIFKMTPHDKQVMMF+ATLSKE+R +CKKFM DPMEI+
Sbjct: 123 AHFVLDECDKMLEAVDMRADVQEIFKMTPHDKQVMMFTATLSKELRALCKKFMNDPMEIF 182
Query: 252 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC 311
VDDE KLTLHGLVQHY+KL E EKNRKLNDLLD+L FNQVVIFV SV R L+KLL EC
Sbjct: 183 VDDETKLTLHGLVQHYVKLEEAEKNRKLNDLLDSLMFNQVVIFVSSVQRCKALDKLLQEC 242
Query: 312 NFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADT 371
NFPSI IH M QEERL RYK FK+G+KRILVATDLV RGIDIERVNIVINYDMP SADT
Sbjct: 243 NFPSIAIHGSMGQEERLARYKSFKDGDKRILVATDLVARGIDIERVNIVINYDMPSSADT 302
Query: 372 YLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
YLHRVGRAGRFGTKGLA+TFV+S+ D+++L+ V
Sbjct: 303 YLHRVGRAGRFGTKGLAVTFVASSEDTEVLSSV 335
>gi|367003589|ref|XP_003686528.1| hypothetical protein TPHA_0G02585 [Tetrapisispora phaffii CBS 4417]
gi|357524829|emb|CCE64094.1| hypothetical protein TPHA_0G02585 [Tetrapisispora phaffii CBS 4417]
Length = 438
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 260/426 (61%), Positives = 326/426 (76%), Gaps = 20/426 (4%)
Query: 7 NEYEDELLDY--EEEDAQAPDSVATK-------------ANGEAAKKGYVGIHSSGFRDF 51
+E E++LL+Y E+D Q VA K GE K YVGIHS+GF+DF
Sbjct: 3 HEGEEDLLEYSDNEQDIQV---VADKAAENTETAAADEGVEGEDKKGSYVGIHSTGFKDF 59
Query: 52 LLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPN 111
LLKPEL RAI+D GFEHPSEVQ IPQ+I G DV+CQAKSG+GKTAVFVLSTLQQ +P
Sbjct: 60 LLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQQLDPV 119
Query: 112 PGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQI 169
PG+V+ +V+C+ RELAYQI +E+ RFS Y+P++K AVFYGG IK DLLKN+ PQI
Sbjct: 120 PGEVSVVVICNARELAYQIRNEYLRFSKYMPEVKTAVFYGGTPIKNDADLLKNKETAPQI 179
Query: 170 VVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFS 229
+V TPGR+ AL RDK + L +V++F++DECDK+LE LDMRRDVQ+IF+ TP DKQVMMFS
Sbjct: 180 IVATPGRLKALVRDKLIDLSHVKNFVIDECDKVLEELDMRRDVQDIFRATPRDKQVMMFS 239
Query: 230 ATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFN 289
ATLS++IRP+C++F+Q+P+EI+VDDEAKLTLHGL Q+YIK+ E EKNRKL LLD L+FN
Sbjct: 240 ATLSEDIRPICRRFLQNPLEIFVDDEAKLTLHGLQQYYIKIEEREKNRKLAQLLDDLEFN 299
Query: 290 QVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVG 349
QV+IFVKS RA EL KLL + NFP+I +H M Q ER+ RYK FK+ KRI V+TD+ G
Sbjct: 300 QVIIFVKSTKRANELTKLLNDSNFPAITVHGHMKQAERIARYKAFKDFEKRICVSTDVFG 359
Query: 350 RGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKFMF 409
RGIDIER+N+ INYD+ AD YLHRVGRAGRFGTKGLA++FVSS D ++L ++ +
Sbjct: 360 RGIDIERINLAINYDLTTEADQYLHRVGRAGRFGTKGLAVSFVSSPEDEEVLGKIQERFD 419
Query: 410 LLIGSF 415
+ I +
Sbjct: 420 VKIAEY 425
>gi|259145161|emb|CAY78425.1| Sub2p [Saccharomyces cerevisiae EC1118]
Length = 446
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 256/389 (65%), Positives = 311/389 (79%), Gaps = 5/389 (1%)
Query: 32 NGEAA--KKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVIC 88
N AA KKG YVGIHS+GF+DFLLKPEL RAI+D GFEHPSEVQ IPQ+I G DV+C
Sbjct: 45 NNAAAGDKKGSYVGIHSTGFKDFLLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLC 104
Query: 89 QAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAV 148
QAKSG+GKTAVFVLSTLQQ +P PG+V +V+C+ RELAYQI +E+ RFS Y+PD+K AV
Sbjct: 105 QAKSGLGKTAVFVLSTLQQLDPVPGEVAVVVICNARELAYQIRNEYLRFSKYMPDVKTAV 164
Query: 149 FYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESL 206
FYGG I +LLKN+ P IVV TPGR+ AL R+K + L +V++F++DECDK+LE L
Sbjct: 165 FYGGTPISKDAELLKNKDTAPHIVVATPGRLKALVREKYIDLSHVKNFVIDECDKVLEEL 224
Query: 207 DMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQH 266
DMRRDVQEIF+ TP DKQVMMFSATLS+EIRP+C++F+Q+P+EI+VDDEAKLTLHGL Q+
Sbjct: 225 DMRRDVQEIFRATPRDKQVMMFSATLSQEIRPICRRFLQNPLEIFVDDEAKLTLHGLQQY 284
Query: 267 YIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEE 326
YIKL E EKNRKL LLD L+FNQV+IFVKS RA EL KLL NFP+I +H M QEE
Sbjct: 285 YIKLEEREKNRKLAQLLDDLEFNQVIIFVKSTIRANELTKLLNASNFPAITVHGHMKQEE 344
Query: 327 RLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKG 386
R+ RYK FK+ KRI V+TD+ GRGIDIER+N+ INYD+ + AD YLHRVGRAGRFGTKG
Sbjct: 345 RIARYKAFKDFEKRICVSTDVFGRGIDIERINLAINYDLTNEADQYLHRVGRAGRFGTKG 404
Query: 387 LAITFVSSASDSDILNQVSKFMFLLIGSF 415
LAI+FVSS D ++L ++ + + I F
Sbjct: 405 LAISFVSSKEDEEVLAKIQERFDVKIAEF 433
>gi|410080890|ref|XP_003958025.1| hypothetical protein KAFR_0F02940 [Kazachstania africana CBS 2517]
gi|372464612|emb|CCF58890.1| hypothetical protein KAFR_0F02940 [Kazachstania africana CBS 2517]
Length = 443
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 262/428 (61%), Positives = 327/428 (76%), Gaps = 19/428 (4%)
Query: 7 NEYEDELLDYE--EEDAQAPDSV----------ATKANGEAA----KKG-YVGIHSSGFR 49
+E E++LL+Y E++ Q S T GE+ KKG YVGIHS+GF+
Sbjct: 3 HEGEEDLLEYSDNEQEIQVDASNAAEAGNAAEGTTGVEGESTTDGDKKGSYVGIHSTGFK 62
Query: 50 DFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTE 109
DFLLKPEL RAI+D GFEHPSEVQ IPQ+I G DV+CQAKSG+GKTAVFVLSTLQQ +
Sbjct: 63 DFLLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQQLD 122
Query: 110 PNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CP 167
P PG+V+ +V+C+ RELAYQI +E+ RFS Y+PD+K AVFYGG ++LKN+ P
Sbjct: 123 PVPGEVSVVVICNARELAYQIRNEYLRFSKYMPDVKTAVFYGGTPTSKDAEILKNKETAP 182
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
IVV TPGR+ AL RDK + L +V++F++DECDK+LE LDMRRDVQEIF+ TP DKQVMM
Sbjct: 183 HIVVATPGRLKALVRDKYIDLSHVKNFVIDECDKVLEELDMRRDVQEIFRATPRDKQVMM 242
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSATLS+EIRP+C++F+Q+P+EI+VDDEAKLTLHGL Q+YIKL E EKNRKL LLD L+
Sbjct: 243 FSATLSQEIRPICRRFLQNPLEIFVDDEAKLTLHGLQQYYIKLEEREKNRKLAQLLDDLE 302
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
FNQV+IFVKS +RA EL KLL NFP+I +H M Q ER+ RYK FK+ KRI V+TD+
Sbjct: 303 FNQVIIFVKSTARANELTKLLNASNFPAITVHGHMKQAERIARYKAFKDFEKRICVSTDV 362
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
GRGIDIER+N+ INYD+ + AD YLHRVGRAGRFGTKGLAI+FVSS D ++L+++ +
Sbjct: 363 FGRGIDIERINLAINYDLSNEADQYLHRVGRAGRFGTKGLAISFVSSKEDEEVLSKIQER 422
Query: 408 MFLLIGSF 415
+ I F
Sbjct: 423 FDVKIAEF 430
>gi|85000681|ref|XP_955059.1| DEAD-box family helicase [Theileria annulata strain Ankara]
gi|65303205|emb|CAI75583.1| DEAD-box family helicase, putative [Theileria annulata]
Length = 451
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 261/428 (60%), Positives = 323/428 (75%), Gaps = 26/428 (6%)
Query: 5 RDNEYEDELLDYEEEDAQAPDSVA----------TKANGEAAKKGYVGIHSSGFRDFLLK 54
+ N ++L+DYEEE+ ++ S +K++G + YV IH+SGFRDF LK
Sbjct: 3 KKNVVTEDLVDYEEEEGESKVSTKDVIKSAAGKKSKSDGTMGRGSYVAIHASGFRDFFLK 62
Query: 55 PELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ--TEPNP 112
PE+LRAI D+GFEHPSEVQHE IP AI G+D++CQAKSGMGKTAVFVLS LQQ E
Sbjct: 63 PEILRAISDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLDVEAEE 122
Query: 113 GQ------------VTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKD 160
G+ V+ + + HTRELA+QI +EF+RFS YLP ++ V YGGV I+
Sbjct: 123 GKRDADDNVKPVSRVSCVGISHTRELAFQIKNEFDRFSKYLPQVRCEVVYGGVPIQKDVA 182
Query: 161 LLKN--ECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKM 218
+LK+ + P I+VGTPGR+LAL + K L++ +V+HF+LDECDK LE LDMR+DVQ IF
Sbjct: 183 MLKDPAKTPHILVGTPGRLLALVKAKHLNMDSVKHFVLDECDKCLEKLDMRQDVQSIFLS 242
Query: 219 TPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRK 278
TP KQVM FSAT++ +IR +CK+FMQ P+E++VDDE+KLTLHGL+Q+Y+KL+E +KNRK
Sbjct: 243 TPKKKQVMFFSATMNNDIRELCKRFMQSPVEVFVDDESKLTLHGLLQYYVKLAESDKNRK 302
Query: 279 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGN 338
LNDLLD L+FNQV+IFVKSVSRA LN LL ECNFPSI IH+G+ Q ER+ RY FK +
Sbjct: 303 LNDLLDTLEFNQVIIFVKSVSRAVTLNNLLTECNFPSIAIHAGLDQSERINRYTQFKNFD 362
Query: 339 KRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDS 398
KRI+VATDL GRGID+ERVNIVINYDMPDS D+YLHRVGRAGRFGTKGLAITFVSS DS
Sbjct: 363 KRIMVATDLFGRGIDVERVNIVINYDMPDSTDSYLHRVGRAGRFGTKGLAITFVSSPEDS 422
Query: 399 DILNQVSK 406
L V K
Sbjct: 423 SQLEDVQK 430
>gi|399218275|emb|CCF75162.1| unnamed protein product [Babesia microti strain RI]
Length = 434
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 261/409 (63%), Positives = 314/409 (76%), Gaps = 12/409 (2%)
Query: 8 EYEDELLDYEEEDAQAPD----SVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVD 63
+ +EL+DYEEE P AT +G + YV IH+SGFRDF LKPELLRAI D
Sbjct: 3 DMNEELVDYEEEQGTLPTRQVIKSATGGDGMIGRGSYVAIHASGFRDFFLKPELLRAIGD 62
Query: 64 SGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEP--NPGQVTALVLC 121
+GFEHPSEVQHE IP AI G+D++CQAKSGMGKTAVFVLS LQQ P T+ V+C
Sbjct: 63 AGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSVLQQINAPDQPTDSTSGVVC 122
Query: 122 ----HTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKN--ECPQIVVGTPG 175
HTRELAYQI +EF+RF Y+ ++K V YGG+ I+ + +LK+ CP ++VGTPG
Sbjct: 123 LGISHTRELAYQIKNEFDRFGKYIKNVKCEVVYGGIPIQKNISMLKDPSTCPHVLVGTPG 182
Query: 176 RILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKE 235
RILAL + + L+ ++HF+LDECDK LE LDMR+DVQ IF TP KQVM FSAT++ E
Sbjct: 183 RILALIKGRYLNTDKIQHFVLDECDKCLEKLDMRKDVQNIFISTPKKKQVMFFSATMTPE 242
Query: 236 IRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFV 295
I+ VCKKFMQ P+E++VD+E+KLTLHGL+Q+Y+KL E +KNRKLNDLLDAL+FNQV+IFV
Sbjct: 243 IKAVCKKFMQSPVEVFVDNESKLTLHGLLQYYVKLQESDKNRKLNDLLDALEFNQVIIFV 302
Query: 296 KSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIE 355
KSVSRA L+ LL ECNFPSI IH+G+ Q ER+TRY FK +KRI+VATDL GRGIDIE
Sbjct: 303 KSVSRAQILDNLLTECNFPSIAIHAGLEQAERITRYNQFKNFDKRIMVATDLFGRGIDIE 362
Query: 356 RVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
RVNIVINYDMPDS D+YLHRVGRAGRFGTKGLAITFVS+ D L V
Sbjct: 363 RVNIVINYDMPDSTDSYLHRVGRAGRFGTKGLAITFVSTDEDLASLQSV 411
>gi|71027499|ref|XP_763393.1| ATP-dependent RNA helicase [Theileria parva strain Muguga]
gi|68350346|gb|EAN31110.1| ATP-dependent RNA helicase, putative [Theileria parva]
Length = 451
Score = 530 bits (1364), Expect = e-148, Method: Compositional matrix adjust.
Identities = 261/428 (60%), Positives = 321/428 (75%), Gaps = 26/428 (6%)
Query: 5 RDNEYEDELLDYEEEDAQAPDSVA----------TKANGEAAKKGYVGIHSSGFRDFLLK 54
+ N ++L+DYEEE+ + S +K +G + YV IH+SGFRDF LK
Sbjct: 3 KKNVVTEDLVDYEEEEGETKVSTKDVIKSAAGKKSKTDGTMGRGSYVAIHASGFRDFFLK 62
Query: 55 PELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ--TEPNP 112
PE+LRAI D+GFEHPSEVQHE IP AI G+D++CQAKSGMGKTAVFVLS LQQ E
Sbjct: 63 PEILRAISDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLDVEAEE 122
Query: 113 GQ------------VTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKD 160
G+ V+ + + HTRELA+QI +EF+RFS YLP ++ V YGGV I+
Sbjct: 123 GKRDAEDNVKPVCRVSCIGISHTRELAFQIKNEFDRFSKYLPQVRCEVVYGGVPIQKDVA 182
Query: 161 LLKN--ECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKM 218
+LK+ + P I+VGTPGR+LAL + K L++ +V+HF+LDECDK LE LDMR+DVQ IF
Sbjct: 183 MLKDPAKTPHILVGTPGRLLALVKAKHLNMDSVKHFVLDECDKCLEKLDMRQDVQSIFLS 242
Query: 219 TPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRK 278
TP KQVM FSAT++ +IR +CK+FMQ P+E++VDDE+KLTLHGL+Q+Y+KL+E +KNRK
Sbjct: 243 TPKKKQVMFFSATMNNDIRELCKRFMQSPVEVFVDDESKLTLHGLLQYYVKLAESDKNRK 302
Query: 279 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGN 338
LNDLLD L+FNQV+IFVKSVSRA LN LL ECNFPSI IH+G+ Q ER+ RY FK +
Sbjct: 303 LNDLLDTLEFNQVIIFVKSVSRAVTLNNLLTECNFPSIAIHAGLDQSERINRYTQFKNFD 362
Query: 339 KRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDS 398
KRI+VATDL GRGID+ERVNIVINYDMPDS D+YLHRVGRAGRFGTKGLAITFVSS DS
Sbjct: 363 KRIMVATDLFGRGIDVERVNIVINYDMPDSTDSYLHRVGRAGRFGTKGLAITFVSSPEDS 422
Query: 399 DILNQVSK 406
L V K
Sbjct: 423 SQLEDVQK 430
>gi|320583137|gb|EFW97353.1| ATP-dependent RNA helicase, putative [Ogataea parapolymorpha DL-1]
Length = 421
Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust.
Identities = 257/416 (61%), Positives = 318/416 (76%), Gaps = 19/416 (4%)
Query: 8 EYEDELLDY---EEEDAQAPDSVATKANG--EAAKKG-YVGIHSSGFRDFLLKPELLRAI 61
E E+ELLDY EE + Q A G E KKG YVGIH++GFRDF K L +
Sbjct: 4 EGEEELLDYSDSEEINVQPAQQAAAGEEGKEETDKKGSYVGIHTTGFRDFFFKLPLTIS- 62
Query: 62 VDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLC 121
VQ CIPQ+ILG DV+CQAKSG+GKTAVFVLSTLQQ +P PG+++ +V+C
Sbjct: 63 ----------VQQACIPQSILGNDVLCQAKSGLGKTAVFVLSTLQQLDPTPGEISTVVIC 112
Query: 122 HTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILA 179
HTRELAYQI +E+ RFS Y+P++K VFYGGVNIK + LKN+ CP IVVGTPGR+ A
Sbjct: 113 HTRELAYQIKNEYARFSKYMPEVKTEVFYGGVNIKQDAEKLKNKDTCPHIVVGTPGRLNA 172
Query: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
L RDK + L NV++F++DECD++LE +DMRRDVQE+F+ TP KQVMMFSATLS+EIRP+
Sbjct: 173 LVRDKLIRLNNVKNFVIDECDQVLEQVDMRRDVQEVFRATPFQKQVMMFSATLSQEIRPI 232
Query: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 299
CKKFM++P+EIYVDDE KLTLHGL Q+YI L E +KN KL +LLD+L+FNQV+IFVKS
Sbjct: 233 CKKFMKNPLEIYVDDEKKLTLHGLQQYYINLPEEKKNLKLAELLDSLEFNQVIIFVKSTK 292
Query: 300 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNI 359
RA LNKLL + NFPSI +HSG+ QEER+ RYK FKE NKRI V+TD+ GRGIDIER+N+
Sbjct: 293 RATALNKLLCDSNFPSIVVHSGIPQEERIARYKLFKEYNKRICVSTDVFGRGIDIERINL 352
Query: 360 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKFMFLLIGSF 415
INYD+P AD YLHRVGRAGRFGTKGL+++FVS+ D +ILN++ + + I F
Sbjct: 353 AINYDLPSEADQYLHRVGRAGRFGTKGLSVSFVSNEQDQEILNKIQERFDVKIQEF 408
>gi|395832555|ref|XP_003789329.1| PREDICTED: spliceosome RNA helicase Ddx39b [Otolemur garnettii]
Length = 423
Score = 523 bits (1346), Expect = e-146, Method: Compositional matrix adjust.
Identities = 247/333 (74%), Positives = 288/333 (86%)
Query: 72 VQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 131
+QHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTRELA+QI
Sbjct: 66 IQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQIS 125
Query: 132 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 191
E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRILALAR+K L+LK++
Sbjct: 126 KEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHI 185
Query: 192 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 251
+HFILDECDKMLE L DVQEIF+MTPH+KQVMMFSATLSKEIRPVC+KFMQDPMEI+
Sbjct: 186 KHFILDECDKMLEQLXXXXDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIF 245
Query: 252 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC 311
VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L +LLVE
Sbjct: 246 VDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQ 305
Query: 312 NFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADT 371
NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNI NYDMP+ +DT
Sbjct: 306 NFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDT 365
Query: 372 YLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
YLHRV RAGRFGTKGLAITFVS +D+ ILN V
Sbjct: 366 YLHRVARAGRFGTKGLAITFVSDENDAKILNDV 398
>gi|189198808|ref|XP_001935741.1| ATP-dependent RNA helicase SUB2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187982840|gb|EDU48328.1| ATP-dependent RNA helicase SUB2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 471
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 267/447 (59%), Positives = 328/447 (73%), Gaps = 49/447 (10%)
Query: 9 YEDELLDYEEEDAQAPD------SVATKAN---GEAA--KKG-YVGIHSSGFRDFLLKPE 56
+E++L+DY +E+ Q + + ATKA+ GEAA KKG YVGIHS+GFRDFLLK E
Sbjct: 3 HEEDLIDYSDEEIQPTEIPSNGAAGATKADLTAGEAAGDKKGSYVGIHSTGFRDFLLKDE 62
Query: 57 LLRAIVDSGFEHPSEVQH-------------------------EC--------IPQAILG 83
L+RAI D GFEHPSE + C IPQAILG
Sbjct: 63 LVRAITDCGFEHPSEEGNLATPDGRTLRSPRFVSTTFKTHSDIHCALQSNKVTIPQAILG 122
Query: 84 MDVICQAKSGMGKTAVFVLSTLQQTE--PNPGQVTALVLCHTRELAYQICHEFERFSTYL 141
DV+CQAKSG+GKTAVFVL+TLQQ + P G T LV+CHTRELAYQI +E+ RF+ +L
Sbjct: 123 NDVLCQAKSGLGKTAVFVLATLQQMDEKPEAGAATILVMCHTRELAYQIRNEYNRFAKFL 182
Query: 142 PDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDEC 199
P+++V VFYGG ++ +LL N+ P I+VGTPGRI AL RD+ L L N++HF+LDEC
Sbjct: 183 PEVRVGVFYGGTPVQKDIELLSNKDSHPHIIVGTPGRINALVRDRHLRLANLKHFVLDEC 242
Query: 200 DKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLT 259
DKML+ DMR DVQ IF+ TP KQVMMFSATL+K++R VCKKFMQ+P+EIYVDDE KLT
Sbjct: 243 DKMLDQPDMRNDVQAIFRATPQHKQVMMFSATLNKDVRVVCKKFMQNPLEIYVDDEKKLT 302
Query: 260 LHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIH 319
LHGL Q+Y+KL E EKNRKLNDLLD+L+FNQV+IFV+S R +EL+KLL ECNFPS +H
Sbjct: 303 LHGLQQYYMKLDEKEKNRKLNDLLDSLEFNQVIIFVRSTLRCSELDKLLRECNFPSTAVH 362
Query: 320 SGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRA 379
SG+SQEER+ RYK FKE RI V+TD+ GRGID+ER+N+ INYDMPD AD YLHRVGRA
Sbjct: 363 SGISQEERIKRYKEFKEFQTRICVSTDIFGRGIDVERINVAINYDMPDKADAYLHRVGRA 422
Query: 380 GRFGTKGLAITFVSSASDSDILNQVSK 406
GRFGTKGL+I+FVSS D +L + +
Sbjct: 423 GRFGTKGLSISFVSSPDDEAVLKSIEE 449
>gi|209881121|ref|XP_002141999.1| ATP-dependent RNA helicae DDX39 [Cryptosporidium muris RN66]
gi|209557605|gb|EEA07650.1| ATP-dependent RNA helicae DDX39, putative [Cryptosporidium muris
RN66]
Length = 427
Score = 520 bits (1339), Expect = e-145, Method: Compositional matrix adjust.
Identities = 262/394 (66%), Positives = 314/394 (79%), Gaps = 9/394 (2%)
Query: 17 EEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHEC 76
E+E+ A +S + + YV IH+SGFRDF LKPEL+RAI D+GFEHPSEVQHE
Sbjct: 21 EDENKLADEST------KVGRGNYVAIHASGFRDFFLKPELIRAIGDAGFEHPSEVQHET 74
Query: 77 IPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEP--NPGQVTALVLCHTRELAYQICHEF 134
IP AI G+D++CQAKSGMGKTAVFVLS LQQ P N V L + HTRELA+Q+ +EF
Sbjct: 75 IPHAITGVDILCQAKSGMGKTAVFVLSILQQLNPDENSKSVECLCIGHTRELAFQVKNEF 134
Query: 135 ERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHF 194
+RFS YL +IK V YGG+ I+ +LL + P I++GTPGRI+AL R K L V HF
Sbjct: 135 DRFSKYLKNIKTQVVYGGIPIQKDIELLSSNVPNILIGTPGRIIALIRQKKLITDGVVHF 194
Query: 195 ILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDD 254
+LDECDK LESLDMR+DVQEIF TP KQVMMFSAT+ KEIR VC+KFMQ+P+EI+VDD
Sbjct: 195 VLDECDKCLESLDMRKDVQEIFMSTPRKKQVMMFSATMVKEIRDVCRKFMQNPVEIFVDD 254
Query: 255 EAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFP 314
E KLTLHGL+Q+Y+KLSE EKNR+L DLLD L+FNQV+IFVKSVSRA L+ LL EC+FP
Sbjct: 255 ETKLTLHGLLQYYVKLSETEKNRRLTDLLDLLEFNQVIIFVKSVSRAQALHNLLTECSFP 314
Query: 315 SICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLH 374
SICIH+G+SQ+ER++RY+ FK KRI+VATDL GRGIDIERVNIVINYDMP++ D+YLH
Sbjct: 315 SICIHAGLSQQERISRYQQFKNFEKRIMVATDLFGRGIDIERVNIVINYDMPENTDSYLH 374
Query: 375 RVGRAGRFGTKGLAITFVSSASDSDILNQV-SKF 407
RVGRAGRFGTKGLAIT V+S +DS ILN V S+F
Sbjct: 375 RVGRAGRFGTKGLAITLVASQTDSQILNDVQSRF 408
>gi|156083913|ref|XP_001609440.1| eIF-4A-like DEAD family RNA helicase [Babesia bovis T2Bo]
gi|154796691|gb|EDO05872.1| eIF-4A-like DEAD family RNA helicase, putative [Babesia bovis]
Length = 472
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 254/429 (59%), Positives = 318/429 (74%), Gaps = 33/429 (7%)
Query: 11 DELLDYEEEDA----------QAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRA 60
++L+DYEE++A S + +G + YV IH+SGFRDF LKPE+LRA
Sbjct: 11 EDLVDYEEQEAGQVTSHNVIKSGASSKVGREDGTMGRGSYVAIHASGFRDFFLKPEILRA 70
Query: 61 IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTE----------- 109
I D+GFEHPSEVQHE IP AI G+D++CQAKSGMGKTAVFVLS LQQ +
Sbjct: 71 IGDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSVLQQLDVQEDGTLAGGV 130
Query: 110 ----------PNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHK 159
P+ +V L + HTRELAYQI +EF+RFS Y+ ++ V YGGV I
Sbjct: 131 KRDAGGEAVAPSADRVACLGISHTRELAYQIKNEFDRFSKYMNGVRCEVVYGGVPISRDI 190
Query: 160 DLLKN--ECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFK 217
++LK+ +CP I+VGTPGR+LAL + K L++ +RHF+LDECDK LE LDMR DVQ IF
Sbjct: 191 EMLKDPEKCPHILVGTPGRLLALIKGKHLNMDGIRHFVLDECDKCLEKLDMRADVQSIFM 250
Query: 218 MTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNR 277
TP KQVM FSAT++ ++R VCK+F++ P+E++VDDE+KLTLHGL+Q+Y+KLSE +KNR
Sbjct: 251 STPKKKQVMFFSATMNNDVRDVCKRFVRSPVEVFVDDESKLTLHGLLQYYVKLSESDKNR 310
Query: 278 KLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEG 337
KLNDLLD L+FNQV+IFVKSVSRA L+ LL ECNFPSI IH+G+ Q+ER+ RY FK
Sbjct: 311 KLNDLLDNLEFNQVIIFVKSVSRAQTLDNLLNECNFPSIAIHAGLDQDERIARYTQFKNF 370
Query: 338 NKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASD 397
+KRI+V+TDL GRGID+ERVNIVINYDMPDS D+YLHRVGRAGRFGTKGLAITFV++ +D
Sbjct: 371 DKRIMVSTDLFGRGIDVERVNIVINYDMPDSTDSYLHRVGRAGRFGTKGLAITFVATEAD 430
Query: 398 SDILNQVSK 406
S L V K
Sbjct: 431 STALADVQK 439
>gi|225320657|dbj|BAH29724.1| DEAD box ATP-dependent RNA helicase [Dicyema japonicum]
Length = 423
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 246/399 (61%), Positives = 309/399 (77%), Gaps = 2/399 (0%)
Query: 9 YED-ELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFE 67
Y D +LLDY+EE+ + + + K +V IHSSGFRDFLLKPELLR I + GFE
Sbjct: 4 YNDTDLLDYDEEENDSVLPTKQANDSQKPKGSHVAIHSSGFRDFLLKPELLRTIQECGFE 63
Query: 68 HPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELA 127
HPSEVQH+CIPQAIL MD++CQAKSGMGKTAV+VLSTL Q + N V LVLCHTRELA
Sbjct: 64 HPSEVQHQCIPQAILNMDIVCQAKSGMGKTAVYVLSTLHQLDENCTNVDTLVLCHTRELA 123
Query: 128 YQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLS 187
+QI E+ERFS YLP++KVAV +GG+ +++ L+ PQ+VVGTPGRIL L + L+
Sbjct: 124 FQISKEYERFSKYLPEVKVAVCFGGIPMQLDISKLRKN-PQVVVGTPGRILQLVSENHLN 182
Query: 188 LKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDP 247
L HF++DECDK+L+ DMR DVQ+IF+ TPH KQV+MFSATL K IRPVC KFM+DP
Sbjct: 183 LSKCHHFVVDECDKVLDKADMRSDVQDIFRKTPHSKQVIMFSATLPKSIRPVCLKFMKDP 242
Query: 248 MEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKL 307
+EIY+DDE+KLTLHGL Q+Y K+ E K R L++LL++L NQ +IFV++V+R L ++
Sbjct: 243 LEIYIDDESKLTLHGLQQYYAKIDENAKTRALSNLLESLSVNQTIIFVRTVNRCIALTEV 302
Query: 308 LVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPD 367
L + NF ICIH GM QEERL RY+ FK+ KRILVATDL GRG+DIERVN+V NYDMPD
Sbjct: 303 LAQANFEVICIHRGMQQEERLKRYQLFKDFEKRILVATDLFGRGMDIERVNVVFNYDMPD 362
Query: 368 SADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
AD++LHRV RAGRFGTKG+A+TFVS+++D +LN+V K
Sbjct: 363 DADSFLHRVARAGRFGTKGIAVTFVSNSTDMGVLNEVQK 401
>gi|302419503|ref|XP_003007582.1| ATP-dependent RNA helicase SUB2 [Verticillium albo-atrum VaMs.102]
gi|261353233|gb|EEY15661.1| ATP-dependent RNA helicase SUB2 [Verticillium albo-atrum VaMs.102]
Length = 420
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 257/414 (62%), Positives = 313/414 (75%), Gaps = 34/414 (8%)
Query: 8 EYEDELLDYEEEDAQAPDSVATKANGEAA------------KKG-YVGIHSSGFRDFLLK 54
+ E++L+DY +E+ Q ++ A +NG+ KKG YVGIH++GFRDFLLK
Sbjct: 4 QQEEDLIDYSDEELQTNETAAA-SNGKKGAADAAATGNSVDKKGSYVGIHATGFRDFLLK 62
Query: 55 PELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQ 114
PELLRAI D GFEHPSEVQ CIPQA+LG D+ICQAKSG+GKTAVFVL+TLQQ EP G+
Sbjct: 63 PELLRAIGDCGFEHPSEVQQTCIPQALLGGDIICQAKSGLGKTAVFVLTTLQQVEPVAGE 122
Query: 115 VTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVG 172
V+ LV+CHTRELA+QI +E+ RFS Y+PDIK VFYGG I+ + +KN+ CP I+VG
Sbjct: 123 VSVLVMCHTRELAFQIRNEYNRFSKYMPDIKTGVFYGGTPIQKDVETIKNKDTCPHIIVG 182
Query: 173 TPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATL 232
TPGR+ AL RDK L L +VR F+LDECDKML+ +DMRRDVQEIF+ TP KQVM+
Sbjct: 183 TPGRLNALVRDKVLRLGSVRIFVLDECDKMLDQIDMRRDVQEIFRATPTQKQVMI----- 237
Query: 233 SKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVV 292
+P E YVD++ KLTLHGL Q+YIKL E EKNRKLN+LLD L FNQV+
Sbjct: 238 -------------NPTEHYVDEDTKLTLHGLQQYYIKLEEREKNRKLNELLDDLQFNQVI 284
Query: 293 IFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGI 352
IFVKS RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FK+ NKRI VATD+ GRGI
Sbjct: 285 IFVKSTLRATELDKLLRECNFPSIAVHSGVSQEERIRRYKEFKDFNKRICVATDVFGRGI 344
Query: 353 DIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
DIER+N+ INYD+P AD+YLHRVGRAGRFGTKGLAI+FVS+ D ++L + K
Sbjct: 345 DIERINLAINYDLPGDADSYLHRVGRAGRFGTKGLAISFVSTDGDKEVLAAIEK 398
>gi|326469268|gb|EGD93277.1| ATP-dependent RNA helicase sub2 [Trichophyton tonsurans CBS 112818]
Length = 440
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 258/417 (61%), Positives = 313/417 (75%), Gaps = 21/417 (5%)
Query: 10 EDELLDYEEEDAQAPDSVATKA----NGEAAKKG--------------YVGIHSSGFRDF 51
E++L+DY +E+ Q D+ A A NG+A+KKG YVGIHS+GFRDF
Sbjct: 4 EEDLIDYSDEELQTTDAAAAPAAPAANGDASKKGDLTVGGAGADKKGSYVGIHSTGFRDF 63
Query: 52 LLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPN 111
LK ELLRAI D GFEHPSEVQ CIP AIL M ++ K + F L Q EP
Sbjct: 64 YLKAELLRAITDCGFEHPSEVQQVCIPTAIL-MSTSLSSQVRSRKDSCFCLDHSPQLEPV 122
Query: 112 PGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL--KNECPQI 169
PG + LV+C TRELAYQI E+ RFS Y+PD+K AVFYGG I+ ++L K+ P I
Sbjct: 123 PGTCSILVMCPTRELAYQIKDEYARFSKYMPDVKTAVFYGGTPIQKDIEILSSKDTHPNI 182
Query: 170 VVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFS 229
+VGTPGR+ AL RDK LSL+N++ F+LDECDKML+ DMR DVQEIF+ TP DKQVMMFS
Sbjct: 183 IVGTPGRLNALLRDKKLSLRNIKSFVLDECDKMLDQKDMRADVQEIFRSTPADKQVMMFS 242
Query: 230 ATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFN 289
ATL++EIRP+CKKFM++P+E+YVDD+ KLTLHGL Q+YIKLSE EKNRKLN+LLD L+FN
Sbjct: 243 ATLAQEIRPICKKFMRNPLEVYVDDDTKLTLHGLQQYYIKLSEAEKNRKLNELLDNLEFN 302
Query: 290 QVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVG 349
QV+IFVKS RA EL+KLL ECNFPSI +HSG+SQEER+ RY+ FKE NKRI VATD+ G
Sbjct: 303 QVIIFVKSTVRATELDKLLRECNFPSIAVHSGVSQEERIKRYREFKEFNKRICVATDVFG 362
Query: 350 RGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
RGIDIER+N+ INYDMP AD+YLHRVGRAGRFGTKGL+I+FVS + +L + K
Sbjct: 363 RGIDIERINLAINYDMPIDADSYLHRVGRAGRFGTKGLSISFVSDEENMQVLKDIEK 419
>gi|428671965|gb|EKX72880.1| DEAD box ATP-dependent RNA helicase family member protein [Babesia
equi]
Length = 471
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 249/400 (62%), Positives = 305/400 (76%), Gaps = 23/400 (5%)
Query: 30 KANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQ 89
+++G + YV IH+SGFRDF LKPE+LRAI D+GFEHPSEVQHE IP AI G+D++CQ
Sbjct: 40 RSDGVMGRGSYVAIHASGFRDFFLKPEILRAISDAGFEHPSEVQHETIPHAITGVDILCQ 99
Query: 90 AKSGMGKTAVFVLSTLQQTEPNPG---------------------QVTALVLCHTRELAY 128
AKSGMGKTAVFVLS LQQ E G ++ + + HTRELA+
Sbjct: 100 AKSGMGKTAVFVLSILQQIEVEEGDVVTGGVKREADGEAKATSEPKIACIGISHTRELAF 159
Query: 129 QICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKN--ECPQIVVGTPGRILALARDKDL 186
QI +EF+RFS YL ++ V YGG+ I+ +L + +CP I+VGTPGR+LAL + K L
Sbjct: 160 QIKNEFDRFSKYLSGVRCEVVYGGIPIQKDIAMLSDPTKCPHILVGTPGRLLALIKGKHL 219
Query: 187 SLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQD 246
+++ VRHF+LDECDK LE LDMR+DVQ IF TP KQVM FSAT++ IR +CK+FMQ
Sbjct: 220 NVEGVRHFVLDECDKCLEKLDMRQDVQSIFMSTPKKKQVMFFSATMNSSIRDLCKRFMQS 279
Query: 247 PMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNK 306
P+E++VDDE+KLTLHGL+Q+YIKL E +KNRKLNDLLD+L+FNQV+IFVKSVSRA L+
Sbjct: 280 PVEVFVDDESKLTLHGLLQYYIKLEESDKNRKLNDLLDSLEFNQVIIFVKSVSRAITLDN 339
Query: 307 LLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMP 366
LL ECNFPSI IH+G+ Q ER++RY FK +KRI+VATDL GRGID+ERVNIVINYDMP
Sbjct: 340 LLSECNFPSIAIHAGLEQSERISRYTQFKNFDKRIMVATDLFGRGIDVERVNIVINYDMP 399
Query: 367 DSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
DS D+YLHRVGRAGRFGTKGLAITFV+S DS L V K
Sbjct: 400 DSTDSYLHRVGRAGRFGTKGLAITFVASPEDSSALADVQK 439
>gi|449015899|dbj|BAM79301.1| ATP-dependent RNA helicase p47 [Cyanidioschyzon merolae strain 10D]
Length = 455
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 254/415 (61%), Positives = 311/415 (74%), Gaps = 20/415 (4%)
Query: 10 EDELLDYEE---EDAQAPDS--------------VATKANGEAAKKGYVGIHSSGFRDFL 52
E+EL+DYEE E+A A ++ +A + AK Y +HS+ FRDFL
Sbjct: 18 EEELVDYEEDQEENALAEETNDAAADQVADAESTEGQQAEPQLAKGTYASLHSANFRDFL 77
Query: 53 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNP 112
L+ ELLRAI D GFE SEVQ + +PQA+LG DV+ QAKSG+GKTAVFVL+ LQQ EP
Sbjct: 78 LRSELLRAIEDCGFESASEVQVQALPQAVLGTDVLVQAKSGLGKTAVFVLAILQQLEPEK 137
Query: 113 GQ--VTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIV 170
+ V+A++L HTRELAYQI +EF RFS YLPD++ VFYGG IK + L + P IV
Sbjct: 138 SENSVSAVILAHTRELAYQIKNEFVRFSKYLPDVRCGVFYGGEPIKQQLEQLASSVPHIV 197
Query: 171 VGTPGRILALA-RDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFS 229
VGTPGR+L LA + K L L VR F++DECDK+LE LDMR DVQEIFKMTP +KQVMMFS
Sbjct: 198 VGTPGRLLDLAVKRKALDLSKVRFFVIDECDKVLEMLDMRADVQEIFKMTPRNKQVMMFS 257
Query: 230 ATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFN 289
ATL E R + +KFM +P EI++DDE+KLTLHGL+Q+Y+KL E EKNRKLNDLLDAL+FN
Sbjct: 258 ATLPPETRSIARKFMHNPHEIFIDDESKLTLHGLLQYYLKLEETEKNRKLNDLLDALEFN 317
Query: 290 QVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVG 349
Q+VIFV+SV RA +N++L E NFPSI IHS M QEER+ RY+ FK+ RILV+TDL G
Sbjct: 318 QLVIFVRSVQRAKFINQMLKESNFPSITIHSAMPQEERIKRYRAFKDFEARILVSTDLFG 377
Query: 350 RGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
RG+D+ERVN+VINYDMP +D YLHRVGRAGRFGTKGLAI+F+SS DS +L V
Sbjct: 378 RGVDVERVNVVINYDMPADSDQYLHRVGRAGRFGTKGLAISFISSEEDSAVLEAV 432
>gi|440791920|gb|ELR13155.1| BAT1 protein [Acanthamoeba castellanii str. Neff]
Length = 464
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 241/370 (65%), Positives = 295/370 (79%), Gaps = 1/370 (0%)
Query: 43 IHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVL 102
+H++ F+DFLLKPELLRAI D GFEHPS+VQ E IPQAILG DVICQA SGMGKTAVFVL
Sbjct: 45 VHTASFKDFLLKPELLRAITDCGFEHPSQVQFEVIPQAILGTDVICQANSGMGKTAVFVL 104
Query: 103 STLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL 162
S LQQ G + L+L HTRELAYQI HEF RF+ Y+P+IK +VF+GG+ I + L
Sbjct: 105 SVLQQISAEDG-TSCLILAHTRELAYQISHEFGRFTKYMPNIKASVFFGGLPIVQDRATL 163
Query: 163 KNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHD 222
K + P IV+GTPGRILALA +K L LK ++ F+LDECD +LE +DMR DVQ+IF++TPH+
Sbjct: 164 KKDPPHIVIGTPGRILALANEKALDLKKIKFFVLDECDSLLEPIDMRADVQKIFRLTPHN 223
Query: 223 KQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDL 282
KQVMMFSATL+ EIR VCKKFM +P+EIY+ +KLTLHGL Q+Y++L E EK RKL DL
Sbjct: 224 KQVMMFSATLNDEIRAVCKKFMHNPLEIYISAGSKLTLHGLNQYYVQLEEREKTRKLVDL 283
Query: 283 LDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRIL 342
LD L+FNQ V+FV SV RAAELNK+LVE NFPSI I+ GM Q+ER+ ++ FK RI+
Sbjct: 284 LDTLEFNQCVVFVSSVKRAAELNKILVEQNFPSIAIYRGMQQKERIEKFAQFKSLRARIV 343
Query: 343 VATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILN 402
VAT+L+GRGID+ER+N+VINYDMP ADTYLHRVGRAGRFGTKGLAI+FVS+ D ++LN
Sbjct: 344 VATNLLGRGIDVERINVVINYDMPGEADTYLHRVGRAGRFGTKGLAISFVSTKEDGEVLN 403
Query: 403 QVSKFMFLLI 412
+V + I
Sbjct: 404 KVQSLFVVNI 413
>gi|167522271|ref|XP_001745473.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775822|gb|EDQ89444.1| predicted protein [Monosiga brevicollis MX1]
Length = 431
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 262/403 (65%), Positives = 306/403 (75%), Gaps = 11/403 (2%)
Query: 10 EDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHP 69
+++LL+Y EE P++ TK + K Y G ++ FRDFLLKPELLRAI + GFEHP
Sbjct: 7 DEDLLEYTEE--AEPETTGTK-DVAKDKGSYAGAQTAVFRDFLLKPELLRAITECGFEHP 63
Query: 70 SEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQ 129
SEVQ ECIPQAILG DV+CQAKSGMGKTAVFV+STLQQ E G+V LV CHTRELAYQ
Sbjct: 64 SEVQQECIPQAILGGDVLCQAKSGMGKTAVFVISTLQQLEREEGKVNVLVSCHTRELAYQ 123
Query: 130 ICHEFERFSTYL-PDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSL 188
I E+ERFS + P K AVFYGG I + +L+++ P IVVGTPGR+ AL L L
Sbjct: 124 IAREYERFSKFFDPVPKTAVFYGGTPIGKDEKVLRDDVPNIVVGTPGRLKALVNSGALKL 183
Query: 189 KNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPM 248
NV+HFILDECDKML+ LDMRRDVQEIF TP KQVMMFSATLSK R VCKKFM DPM
Sbjct: 184 SNVKHFILDECDKMLDQLDMRRDVQEIFLKTPVQKQVMMFSATLSKTSREVCKKFMDDPM 243
Query: 249 EIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLL 308
E+ +DD+AKLTLHGL QHY+KL E +KNRKL DLLDAL+FNQVVIFVKS RA L+ LL
Sbjct: 244 EVSIDDDAKLTLHGLKQHYVKLLEEQKNRKLLDLLDALEFNQVVIFVKSGRRAETLSALL 303
Query: 309 VECNFPSICIHSG-MSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMP- 366
+ FP+ IH G M Q +RL RY+ FK KRILVATD+ GRG+DIERVNIVINYDMP
Sbjct: 304 QDQMFPATHIHGGRMPQAKRLERYQQFKNFEKRILVATDVFGRGMDIERVNIVINYDMPE 363
Query: 367 -----DSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
D++DTYLHRV RAGRFGTKGLA++FVS+ D+ +LN+V
Sbjct: 364 DTEESDASDTYLHRVARAGRFGTKGLAVSFVSTDEDATVLNKV 406
>gi|396463395|ref|XP_003836308.1| similar to ATP-dependent RNA helicase sub2 [Leptosphaeria maculans
JN3]
gi|312212861|emb|CBX92943.1| similar to ATP-dependent RNA helicase sub2 [Leptosphaeria maculans
JN3]
Length = 486
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 262/462 (56%), Positives = 319/462 (69%), Gaps = 64/462 (13%)
Query: 9 YEDELLDYEEEDAQAPD-----------SVATKANGEAAKKG-YVGIHSSGFRDFLLKPE 56
+E++L+DY +E+ + S T + KKG YVGIHS+GFRDFLLK E
Sbjct: 3 HEEDLIDYSDEEIAPTEAPANGSAAAAKSGLTAGDTAGDKKGSYVGIHSTGFRDFLLKDE 62
Query: 57 LLRAIVDSGFEHPSE--------------------------------------------- 71
L+RAI D GFEHPSE
Sbjct: 63 LVRAITDCGFEHPSEAPVAIYGLASKLYMNPIVAAQPIKKPFPLDKFTPAVPQDCDWRTS 122
Query: 72 ---VQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTE--PNPGQVTALVLCHTREL 126
VQ IPQAILG DV+CQAKSG+GKTAVFVL+TLQQ + P PG T LV+CHTREL
Sbjct: 123 ALGVQQVTIPQAILGNDVLCQAKSGLGKTAVFVLATLQQMDEKPEPGIATILVMCHTREL 182
Query: 127 AYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDK 184
AYQI +E+ RF+ +LP++KV VFYGG + +LL N+ P I+VGTPGRI AL RDK
Sbjct: 183 AYQIRNEYNRFAKFLPEVKVGVFYGGTPVLKDIELLGNKEFHPHIIVGTPGRINALVRDK 242
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 244
L L N++HF+LDECDKML+ DMR DVQ IF+ TP KQVMMFSATL+K++R +CKKFM
Sbjct: 243 HLRLANLKHFVLDECDKMLDQPDMRNDVQAIFRATPAHKQVMMFSATLNKDVRVICKKFM 302
Query: 245 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 304
Q+P+EIYVDDE KLTLHGL Q+Y+KL E EKNRKLNDLLD+L+FNQV+IFV+S R EL
Sbjct: 303 QNPLEIYVDDEKKLTLHGLQQYYMKLDEREKNRKLNDLLDSLEFNQVIIFVRSTLRCTEL 362
Query: 305 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 364
+KLL ECNFPS +HSG+ QEER+ RYK FKE RI V+TD+ GRGID+ER+N+ INYD
Sbjct: 363 DKLLRECNFPSTAVHSGIGQEERIKRYKEFKEFQTRICVSTDIFGRGIDVERINVAINYD 422
Query: 365 MPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
MPD AD+YLHRVGRAGRFGTKGL+I+FVSS D +L + +
Sbjct: 423 MPDKADSYLHRVGRAGRFGTKGLSISFVSSPEDEAVLKSIEE 464
>gi|452987512|gb|EME87267.1| hypothetical protein MYCFIDRAFT_71177 [Pseudocercospora fijiensis
CIRAD86]
Length = 428
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 245/415 (59%), Positives = 309/415 (74%), Gaps = 32/415 (7%)
Query: 10 EDELLDYEEEDAQA------------------PDSVATKANGEAAKKGYVGIHSSGFRDF 51
E++L+DY +E+ Q + + K YVGIHS+ FRDF
Sbjct: 4 EEDLIDYSDEELQPTDGAAGATGAAAANGDAKKGDLTVSGGADKTKGSYVGIHSTSFRDF 63
Query: 52 LLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPN 111
LLKPELL+AI D GFEHPSEVQ CIPQAILG DV+CQAKSG+GKTAVFVLSTLQQ EP
Sbjct: 64 LLKPELLKAITDCGFEHPSEVQQVCIPQAILGTDVLCQAKSGLGKTAVFVLSTLQQIEPV 123
Query: 112 PGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNEC--PQI 169
G+V+ LV+CHTRELA+QI +E++RFS Y+P+++ VFYGGV I ++ +L+++ P I
Sbjct: 124 AGEVSVLVMCHTRELAFQIKNEYQRFSKYMPEVRTEVFYGGVPITENEKILRDKTTHPHI 183
Query: 170 VVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFS 229
VV TPGR+ AL R+K L L +V F+LDECDKML+ +DMRRDVQEIF+ TP KQVMMFS
Sbjct: 184 VVATPGRLNALVREKKLRLGSVSRFVLDECDKMLDQIDMRRDVQEIFRATPTQKQVMMFS 243
Query: 230 ATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFN 289
ATLS + +P+CKKFMQ+P+EIYVDDEAKLTLHGL Q+Y+KL+E EKNR+LNDLLD L +N
Sbjct: 244 ATLSAQTKPICKKFMQNPLEIYVDDEAKLTLHGLQQYYVKLTEEEKNRRLNDLLDTLSYN 303
Query: 290 QVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVG 349
QV+IFVK+ RA ELN+LLVECNFPSI +HS + Q++R+ RY+ FK +KRI V+TD+ G
Sbjct: 304 QVIIFVKNTIRATELNRLLVECNFPSITVHSNLPQDDRIKRYQAFKNYDKRICVSTDVFG 363
Query: 350 RGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
R + +ADTYLHRVGRAGRFGTKG+AI+FVSS D+D+L +
Sbjct: 364 RE------------SIAQAADTYLHRVGRAGRFGTKGIAISFVSSDRDADVLKAI 406
>gi|365986805|ref|XP_003670234.1| hypothetical protein NDAI_0E01750 [Naumovozyma dairenensis CBS 421]
gi|343769004|emb|CCD24991.1| hypothetical protein NDAI_0E01750 [Naumovozyma dairenensis CBS 421]
Length = 450
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 255/428 (59%), Positives = 313/428 (73%), Gaps = 16/428 (3%)
Query: 3 ETRDNEYE------DELLDYEEEDAQAPDSVATKANGEAAKKG-------YVGIHSSGFR 49
E DNE E + + E A A D+ AT AA G V I +
Sbjct: 11 EYSDNEQEIQVDATNAATESTEGAAGATDASATTEGDAAATTGADKRVPTLVSIPLDS-K 69
Query: 50 DFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTE 109
FLLKPEL RAI+D GFEHPSEVQ IPQ+I G DV+CQAKSG+GKTAVFVLSTLQQ +
Sbjct: 70 YFLLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQQLD 129
Query: 110 PNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CP 167
P PG+V +V+C+ RELAYQI +E+ RFS Y+PD+K AVFYGG I +LLKN+ P
Sbjct: 130 PVPGEVAVVVICNARELAYQIRNEYLRFSKYMPDVKTAVFYGGTPINKDAELLKNKDTAP 189
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
IVV TPGR+ AL RDK + L +V++F++DECDK+LE LDMRRDVQEIF+ TP DKQVMM
Sbjct: 190 HIVVATPGRLKALVRDKYIDLSHVKNFVIDECDKVLEELDMRRDVQEIFRATPRDKQVMM 249
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSATLS+EIRP+C++F+Q+P+EI+VDDEAKLTLHGL Q+YIKL E EKNRKL LLD L+
Sbjct: 250 FSATLSQEIRPICRRFLQNPLEIFVDDEAKLTLHGLQQYYIKLEEREKNRKLAQLLDDLE 309
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
FNQV+IFVKS +RA EL KLL NFP+I +H M QEER+ RYK FK+ KRI V+TD+
Sbjct: 310 FNQVIIFVKSTNRANELTKLLNASNFPAITVHGHMKQEERIARYKAFKDFEKRICVSTDV 369
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
GRGIDIER+N+ INYD+ D YLHRVGRAGRFGTKGLAI+FV+S + ++L ++ +
Sbjct: 370 FGRGIDIERINLAINYDLTSEPDQYLHRVGRAGRFGTKGLAISFVASKEEEEVLAKIQER 429
Query: 408 MFLLIGSF 415
+ I F
Sbjct: 430 FDVKIAEF 437
>gi|390371118|dbj|GAB64999.1| eIF-4A-like DEAD family RNA helicase [Plasmodium cynomolgi strain
B]
Length = 472
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 256/447 (57%), Positives = 317/447 (70%), Gaps = 46/447 (10%)
Query: 4 TRDNEYEDELLDYEEE-------------DAQAPDSVATKANGEAAKKG-YVGIHSSGFR 49
T D+ +DEL+DYE++ D+ ++ + N A +G Y +H+ GF+
Sbjct: 3 TMDHSVQDELVDYEDDENILDAKDVKGNLDSSLLNNNSKGVNENGAMRGSYATVHTGGFK 62
Query: 50 DFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTE 109
DF LKPELLRAI +SGFEHPSEVQ E IP AI G D++CQAKSGMGKTAVFVLS LQQ E
Sbjct: 63 DFFLKPELLRAISESGFEHPSEVQQETIPAAITGTDILCQAKSGMGKTAVFVLSILQQLE 122
Query: 110 PNPGQ-------------------------------VTALVLCHTRELAYQICHEFERFS 138
N G+ V L L HTRELAYQI +EF+RFS
Sbjct: 123 TNDGKDIKEEKEMNNTTSNNIGGDLTNGNGAPKNKFVRCLGLAHTRELAYQIKNEFDRFS 182
Query: 139 TYLPDIKVAVFYGGVNIKIHKDLLKNEC-PQIVVGTPGRILALARDKDLSLKNVRHFILD 197
YL ++ V YGG+ + H + K E P I++GTPGRILAL R+K L + ++HF+LD
Sbjct: 183 KYLKGVRCEVVYGGIAMSKHIKMFKEESVPHIIIGTPGRILALIREKYLLTEKIQHFVLD 242
Query: 198 ECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAK 257
ECDK LE LDMR DVQ+IF TP KQVM FSAT++KE+R VCKKF+Q+P+EI++DDEAK
Sbjct: 243 ECDKCLEKLDMRSDVQKIFISTPLKKQVMFFSATMAKEMRDVCKKFLQNPVEIFIDDEAK 302
Query: 258 LTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSIC 317
L LHGL+QHY+KL E +K RKL ++LDAL+FNQV+IFVKSV+RA L+KLL ECNFPSI
Sbjct: 303 LKLHGLLQHYVKLQEKDKTRKLIEILDALEFNQVIIFVKSVTRAITLDKLLTECNFPSIA 362
Query: 318 IHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 377
IH G+ Q+ER+ RY FK+ RILV+TDL GRGIDIERVNIVINYDMP+++D+YLHRVG
Sbjct: 363 IHGGLDQQERIERYDKFKKFENRILVSTDLFGRGIDIERVNIVINYDMPENSDSYLHRVG 422
Query: 378 RAGRFGTKGLAITFVSSASDSDILNQV 404
RAGRFGTKGLA+TFVSS D+ LN+V
Sbjct: 423 RAGRFGTKGLAVTFVSSQEDTLALNEV 449
>gi|124801080|ref|XP_001349607.1| DEAD box helicase, UAP56 [Plasmodium falciparum 3D7]
gi|3845186|gb|AAC71878.1| DEAD box helicase, UAP56 [Plasmodium falciparum 3D7]
gi|156072122|gb|ABU45412.1| DEAD-box helicase 1 [Plasmodium falciparum]
Length = 457
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 256/431 (59%), Positives = 313/431 (72%), Gaps = 33/431 (7%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGE-----------AAKKGYVGIHSSGFRDFLLK 54
D+ +DEL+DYE+ D DS K N A + Y +H+ GF+DF LK
Sbjct: 5 DHNAQDELVDYED-DENILDSKDVKGNLGNNILNNNNKGGAMRGSYATVHTGGFKDFFLK 63
Query: 55 PELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQ 114
PELLRAI +SGFEHPSEVQ E IP AI G D++CQAKSGMGKTAVFVLS LQQ + N Q
Sbjct: 64 PELLRAISESGFEHPSEVQQETIPAAITGTDILCQAKSGMGKTAVFVLSILQQLDTNENQ 123
Query: 115 --------------------VTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVN 154
V L L HTRELAYQI +EF+RFS YL +++ V YGG++
Sbjct: 124 DMQDTKEMNNDNNNNGDNKFVRCLGLAHTRELAYQIKNEFDRFSKYLKNVRCEVVYGGIS 183
Query: 155 IKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQ 213
+ H L K + P I++GTPGRILAL R+K L ++HF+LDECDK LE LDMR DVQ
Sbjct: 184 MNKHIKLFKEDNIPHIIIGTPGRILALIREKYLITDKIQHFVLDECDKCLEKLDMRSDVQ 243
Query: 214 EIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEL 273
+IF TP KQVM FSAT++KE+R VCKKF+Q+P+EI++DDEAKL LHGL+QHY+KL E
Sbjct: 244 KIFISTPLKKQVMFFSATMAKEMRDVCKKFLQNPVEIFIDDEAKLKLHGLLQHYVKLQEK 303
Query: 274 EKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKG 333
+K RKL ++LDAL+FNQV+IFVKSV+RA L+KLL ECNFPSI IH G+ Q+ER+ RY
Sbjct: 304 DKTRKLIEILDALEFNQVIIFVKSVTRAITLDKLLTECNFPSIAIHGGLEQQERIERYDK 363
Query: 334 FKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
FK+ RILV+TDL GRGIDIERVNIVINYDMP+++D+YLHRVGRAGRFGTKGLA+TFVS
Sbjct: 364 FKKFENRILVSTDLFGRGIDIERVNIVINYDMPENSDSYLHRVGRAGRFGTKGLAVTFVS 423
Query: 394 SASDSDILNQV 404
S D+ LN+V
Sbjct: 424 SQEDTLALNEV 434
>gi|291001111|ref|XP_002683122.1| predicted protein [Naegleria gruberi]
gi|284096751|gb|EFC50378.1| predicted protein [Naegleria gruberi]
Length = 441
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 244/393 (62%), Positives = 302/393 (76%), Gaps = 2/393 (0%)
Query: 10 EDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHP 69
+DEL D++E+ P + + A KGY ++SSGFRDF+LKPE+L+AIVD GFEHP
Sbjct: 10 DDELADFDEDLQTKPTTASAGDKKAANSKGYSSVNSSGFRDFVLKPEILKAIVDCGFEHP 69
Query: 70 SEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQ 129
SEVQHECIPQA++G DV+CQAKSGMGKTAVFV+S LQQ E + ++LCH RELAYQ
Sbjct: 70 SEVQHECIPQAMIGSDVLCQAKSGMGKTAVFVISVLQQLETIEPKTMCVILCHARELAYQ 129
Query: 130 ICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLK 189
IC EF RFS YLPD++V F GG+NIK H + LK+E P +VVGTPGR+L LA+D L L
Sbjct: 130 ICQEFNRFSKYLPDVRVKSFIGGINIKTHIEQLKSETPHVVVGTPGRVLQLAKDGHLKLG 189
Query: 190 NVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDP-- 247
NV++FI+DECDK+LES +MR D+QEIFK TP KQVMMFSATLS E+R KKFM
Sbjct: 190 NVKYFIVDECDKVLESEEMRSDMQEIFKKTPKTKQVMMFSATLSTEMRLTAKKFMNPSSL 249
Query: 248 MEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKL 307
ME+ VD ++KLTLHGL Q++I L E EKN KL LDAL+FNQVVIFV++ +RA +L +
Sbjct: 250 MEVKVDSDSKLTLHGLQQYFILLKEEEKNGKLLSWLDALEFNQVVIFVRTKNRAEKLKDI 309
Query: 308 LVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPD 367
L + FP + +HS MSQ+ERL +Y+ FK KRI+++TDL+GRGIDI+RVNIV NYDMPD
Sbjct: 310 LEKNGFPCLTMHSDMSQDERLKQYQSFKNFEKRIMISTDLLGRGIDIQRVNIVFNYDMPD 369
Query: 368 SADTYLHRVGRAGRFGTKGLAITFVSSASDSDI 400
D+YLHRVGRAGRFGTKGLAI+F+SS S I
Sbjct: 370 EPDSYLHRVGRAGRFGTKGLAISFISSDMPSKI 402
>gi|432094980|gb|ELK26388.1| ATP-dependent RNA helicase DDX39A [Myotis davidii]
Length = 509
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 249/396 (62%), Positives = 302/396 (76%), Gaps = 23/396 (5%)
Query: 10 EDELLDYEE-EDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEH 68
E+ELLDYEE E QAP + K YV IHSSGFRDFLLKPEL RAIVD FEH
Sbjct: 7 ENELLDYEEDEQPQAPTESTPVPPKKDVKGSYVSIHSSGFRDFLLKPELPRAIVDCSFEH 66
Query: 69 PSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAY 128
SEVQH+C PQAILGMDV+CQA+SGMGKT+VFVL+TLQQ
Sbjct: 67 ASEVQHQCTPQAILGMDVLCQAQSGMGKTSVFVLATLQQ--------------------- 105
Query: 129 QICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSL 188
I E+ERFS Y+P +KV+VF+GG+++K K++LK P ++VG PGRI AL R++ L+L
Sbjct: 106 -IRKEYERFSKYMPIVKVSVFFGGLSMKKDKEVLKKNYPHVMVGIPGRISALVRNRSLNL 164
Query: 189 KNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPM 248
+NV+HF+LDECD+MLE LDMRRDVQEIF++TP +KQ MMFSATLSK+IRP+C+KFMQDPM
Sbjct: 165 RNVKHFVLDECDQMLEQLDMRRDVQEIFRLTPREKQCMMFSATLSKQIRPICRKFMQDPM 224
Query: 249 EIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLL 308
E+ VDD+ KLTLHG Q+Y+KL + EKN KL DLLD L+FNQVVIFV+ V L +LL
Sbjct: 225 EVLVDDKTKLTLHGPQQYYVKLKDSEKNCKLFDLLDVLEFNQVVIFVRLVQCCMALAQLL 284
Query: 309 VECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDS 368
VE NFP+I IH M+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYD P+
Sbjct: 285 VEENFPAIAIHKAMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDTPED 344
Query: 369 ADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
+DTY RV RAGRFGTKGLAITFVS +D+ ILN+V
Sbjct: 345 SDTYFPRVARAGRFGTKGLAITFVSHENDAKILNEV 380
>gi|156093980|ref|XP_001613028.1| eIF-4A-like DEAD family RNA helicase [Plasmodium vivax Sal-1]
gi|148801902|gb|EDL43301.1| eIF-4A-like DEAD family RNA helicase, putative [Plasmodium vivax]
Length = 473
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 257/448 (57%), Positives = 315/448 (70%), Gaps = 47/448 (10%)
Query: 4 TRDNEYEDELLDYEEEDA--QAPDSVATKANGE------------AAKKGYVGIHSSGFR 49
T D+ +DEL+DYE+++ A D T N A + Y +H+ GF+
Sbjct: 3 TMDHSVQDELVDYEDDENILDAKDVKGTLDNSLLNNNNKGVNENGAMRGSYATVHTGGFK 62
Query: 50 DFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTE 109
DF LKPELLRAI +SGFEHPSEVQ E IP AI G D++CQAKSGMGKTAVFVLS LQQ E
Sbjct: 63 DFFLKPELLRAISESGFEHPSEVQQETIPAAITGTDILCQAKSGMGKTAVFVLSILQQLE 122
Query: 110 PNPGQ--------------------------------VTALVLCHTRELAYQICHEFERF 137
N G+ V L L HTRELAYQI +EF+RF
Sbjct: 123 TNDGKDIKEEKEMNNSAGSNNIGGDLTNGSGASKNKFVRCLGLAHTRELAYQIKNEFDRF 182
Query: 138 STYLPDIKVAVFYGGVNIKIHKDLLKNE-CPQIVVGTPGRILALARDKDLSLKNVRHFIL 196
S YL ++ V YGG+++ H + K E P I++GTPGRILAL R+K L ++HF+L
Sbjct: 183 SKYLKGVRCEVVYGGISMSKHIKMFKEEGIPHIIIGTPGRILALIREKYLLTDKIQHFVL 242
Query: 197 DECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEA 256
DECDK LE LDMR DVQ+IF TP KQVM FSAT++KE+R VCKKF+Q+P+EI++DDEA
Sbjct: 243 DECDKCLEKLDMRSDVQKIFISTPLKKQVMFFSATMAKEMRDVCKKFLQNPVEIFIDDEA 302
Query: 257 KLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSI 316
KL LHGL+QHY+KL E +K RKL ++LDAL+FNQV+IFVKSV+RA L+KLL ECNFPSI
Sbjct: 303 KLKLHGLLQHYVKLQEKDKTRKLIEILDALEFNQVIIFVKSVTRAITLDKLLTECNFPSI 362
Query: 317 CIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRV 376
IH G+ Q+ER+ RY FK+ RILV+TDL GRGIDIERVNIVINYDMP+++D+YLHRV
Sbjct: 363 AIHGGLDQQERIERYDKFKKFENRILVSTDLFGRGIDIERVNIVINYDMPENSDSYLHRV 422
Query: 377 GRAGRFGTKGLAITFVSSASDSDILNQV 404
GRAGRFGTKGLA+TFVSS D+ LN+V
Sbjct: 423 GRAGRFGTKGLAVTFVSSQEDTLALNEV 450
>gi|41054355|ref|NP_956015.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa [Danio rerio]
gi|27503947|gb|AAH42330.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 39a [Danio rerio]
gi|182888744|gb|AAI64154.1| Ddx39a protein [Danio rerio]
Length = 346
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 234/321 (72%), Positives = 279/321 (86%)
Query: 84 MDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPD 143
MD++CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTRELA+QI E+ERFS Y+
Sbjct: 1 MDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCHTRELAFQISKEYERFSKYMSS 60
Query: 144 IKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 203
+K AVF+GG++IK +D+LK CP IVVGTPGRILAL+R+K L+LKNV+HF+LDECDKML
Sbjct: 61 VKCAVFFGGMSIKKDEDVLKKNCPHIVVGTPGRILALSRNKTLTLKNVKHFVLDECDKML 120
Query: 204 ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGL 263
E LDMRRDVQ+IF++TPH+KQ MMFSATLSKEIRPVC+KFMQDPME++VDDE KLTLHGL
Sbjct: 121 EQLDMRRDVQDIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGL 180
Query: 264 VQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMS 323
Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L++LLVE NFP+I IH GM+
Sbjct: 181 QQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVPRCVALSQLLVEQNFPAIAIHRGMT 240
Query: 324 QEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 383
QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYDMP+ +DTYLHRV RAGRFG
Sbjct: 241 QEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFG 300
Query: 384 TKGLAITFVSSASDSDILNQV 404
TKGLA+TFVS +D+ ILN V
Sbjct: 301 TKGLAVTFVSDETDAKILNDV 321
>gi|68073823|ref|XP_678826.1| helicase [Plasmodium berghei strain ANKA]
gi|56499417|emb|CAI04881.1| helicase, putative [Plasmodium berghei]
Length = 466
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 254/439 (57%), Positives = 314/439 (71%), Gaps = 40/439 (9%)
Query: 6 DNEYEDELLDYEEEDAQAPDS-------------VATKANGEAAKKG-YVGIHSSGFRDF 51
D+ +DEL+DYE++D + N A +G Y +H+ GF+DF
Sbjct: 5 DHNVQDELVDYEDDDNMLDNKDVKCDIGGNLLNNNNKGVNESGAMRGSYATVHTGGFKDF 64
Query: 52 LLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPN 111
LKPELLRAI +SGFEHPSEVQ E IP AI G D++CQAKSGMGKTAVFVLS LQQ E N
Sbjct: 65 FLKPELLRAISESGFEHPSEVQQETIPAAITGTDILCQAKSGMGKTAVFVLSILQQLETN 124
Query: 112 PGQ-------------------------VTALVLCHTRELAYQICHEFERFSTYLPDIKV 146
+ V L + HTRELAYQI +EF+RFS YL +++
Sbjct: 125 DSKDIKEEKDMNNASGDMNQNSGSQNKYVRCLGIAHTRELAYQIKNEFDRFSKYLKNVRC 184
Query: 147 AVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLES 205
V YGG+++ H L K N P I++GTPGRILAL R+K + ++HF+LDECDK LE
Sbjct: 185 EVVYGGISMNKHVVLFKGNNIPHIIIGTPGRILALIREKYMLTDKIQHFVLDECDKCLER 244
Query: 206 LDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQ 265
LDMR DVQ+IF TP KQVM FSAT++KE+R VCKKF+Q+P+EI++DDEAKL LHGL+Q
Sbjct: 245 LDMRGDVQKIFISTPLKKQVMFFSATMAKEMRDVCKKFLQNPVEIFIDDEAKLKLHGLLQ 304
Query: 266 HYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQE 325
HY+KL E +K RKL ++LDAL+FNQV+IFVKSV+RA L+KLL ECNFPSI IH G++QE
Sbjct: 305 HYVKLQEKDKTRKLIEILDALEFNQVIIFVKSVTRAITLDKLLTECNFPSISIHGGLNQE 364
Query: 326 ERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTK 385
ER+ RY FK+ RILV+TDL GRGIDIER+NIVINYDMP+++D+YLHRVGRAGRFGTK
Sbjct: 365 ERIERYDKFKKFENRILVSTDLFGRGIDIERINIVINYDMPENSDSYLHRVGRAGRFGTK 424
Query: 386 GLAITFVSSASDSDILNQV 404
GLAITFVSS D+ LN+V
Sbjct: 425 GLAITFVSSQEDTLALNEV 443
>gi|190345404|gb|EDK37283.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 370
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 237/339 (69%), Positives = 284/339 (83%), Gaps = 3/339 (0%)
Query: 72 VQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 131
VQ CIPQ+ILG DV+CQAKSG+GKTAVFVLSTLQQ +P PG++T LV+CHTRELAYQI
Sbjct: 12 VQQVCIPQSILGTDVLCQAKSGLGKTAVFVLSTLQQLDPVPGEITTLVICHTRELAYQIR 71
Query: 132 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLK 189
+E+ RFS Y+PD+K VFYGG+ I + LKN+ CP IVV TPGR+ AL +K + L
Sbjct: 72 NEYARFSKYMPDVKTEVFYGGIPIAKDIEKLKNKDTCPHIVVATPGRLHALVEEKAIRLN 131
Query: 190 NVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPME 249
NV+ F++DECDK+LE++DMRRDVQ+IF+ TPH KQVMMFSATLS+EIRPVCKKFMQ+P+E
Sbjct: 132 NVKSFVIDECDKVLEAIDMRRDVQDIFRNTPHQKQVMMFSATLSQEIRPVCKKFMQNPLE 191
Query: 250 IYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLV 309
IYVDDEAKLTLHGL Q+Y+KL E EKNRKL DLLD+L+FNQV+IFVKS SRA ELNKLLV
Sbjct: 192 IYVDDEAKLTLHGLQQYYLKLDEKEKNRKLADLLDSLEFNQVIIFVKSTSRANELNKLLV 251
Query: 310 ECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSA 369
NFPSI +HS M QEER+ RYK FKE NKRI V+TD+ GRGIDIER+N+ INYD+P+ A
Sbjct: 252 ASNFPSIAVHSAMPQEERIARYKSFKEFNKRICVSTDVFGRGIDIERINLAINYDLPNEA 311
Query: 370 DTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV-SKF 407
D YLHRVGRAGRFGTKGLAI+FV S D ++L ++ S+F
Sbjct: 312 DQYLHRVGRAGRFGTKGLAISFVGSKEDEEVLEKIQSRF 350
>gi|405952463|gb|EKC20272.1| Spliceosome RNA helicase BAT1 [Crassostrea gigas]
Length = 424
Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust.
Identities = 248/404 (61%), Positives = 315/404 (77%), Gaps = 11/404 (2%)
Query: 11 DELL-DYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHP 69
DE+L DYEEE + + V++ E + + IHSSGFRD LLKPELL+AI D G+EHP
Sbjct: 4 DEMLRDYEEETSVS---VSSVVPIEERRDKFSSIHSSGFRDLLLKPELLQAIKDRGYEHP 60
Query: 70 SEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQ 129
S+VQHECIPQA+L MDV+CQAKSGMGKTAVFV+STLQQ + + V LV+ HTRELAYQ
Sbjct: 61 SQVQHECIPQAVLSMDVLCQAKSGMGKTAVFVISTLQQIQESIDDVVVLVIAHTRELAYQ 120
Query: 130 ICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLK 189
I HE++ FS YLP+IKVAVF+GG+ IK +++L P IVVGTPGR+LAL + K L+L
Sbjct: 121 IAHEYQTFSKYLPEIKVAVFFGGLPIKRDEEVLAKNRPNIVVGTPGRLLALVQKKKLTLD 180
Query: 190 NVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPME 249
N+R+FI+DECD++L+ + MR+DVQ IF +P KQVMMFSATL+K++R VCK+FM DP+E
Sbjct: 181 NLRYFIVDECDQVLKEIVMRKDVQAIFIRSPCAKQVMMFSATLNKDLRTVCKRFMSDPVE 240
Query: 250 IYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLV 309
I +DDE+KLTLHGL Q+YI++ E EK+RK+ DLLD L+FNQV+IFV S+SR L LL+
Sbjct: 241 IIIDDESKLTLHGLQQYYIQMEENEKSRKICDLLDLLEFNQVIIFVNSISRCQALASLLL 300
Query: 310 ECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIER-------VNIVIN 362
E NFP + IH M Q ERL+RY+ FK+ KRILVAT+L GRG+DIER + +IN
Sbjct: 301 EQNFPVLTIHRAMEQTERLSRYQQFKDFQKRILVATNLFGRGMDIEREKSNQIGFDNIIN 360
Query: 363 YDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
YD P+ +DTYLHRVGRAGRFGTKGLAITFVSS SD++++N V +
Sbjct: 361 YDTPEESDTYLHRVGRAGRFGTKGLAITFVSSQSDAEVMNSVQE 404
>gi|83317473|ref|XP_731176.1| DEAD/DEAH box helicase [Plasmodium yoelii yoelii 17XNL]
gi|23491131|gb|EAA22741.1| DEAD/DEAH box helicase, putative [Plasmodium yoelii yoelii]
Length = 497
Score = 503 bits (1294), Expect = e-140, Method: Compositional matrix adjust.
Identities = 254/439 (57%), Positives = 314/439 (71%), Gaps = 40/439 (9%)
Query: 6 DNEYEDELLDYEEEDAQAPDS-------------VATKANGEAAKKG-YVGIHSSGFRDF 51
D+ +DEL+DYE++D + N A +G Y +H+ GF+DF
Sbjct: 5 DHNVQDELVDYEDDDNMLDNKDVKGDIGGNLLNNNNKGVNDSGAMRGSYATVHTGGFKDF 64
Query: 52 LLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPN 111
LKPELLRAI +SGFEHPSEVQ E IP AI G D++CQAKSGMGKTAVFVLS LQQ E N
Sbjct: 65 FLKPELLRAISESGFEHPSEVQQETIPAAITGTDILCQAKSGMGKTAVFVLSILQQLETN 124
Query: 112 PGQ-------------------------VTALVLCHTRELAYQICHEFERFSTYLPDIKV 146
+ V L + HTRELAYQI +EF+RFS YL +++
Sbjct: 125 DSKDIKEEKDMNNANGDMNQNSGSQNKYVRCLGIAHTRELAYQIKNEFDRFSKYLKNVRC 184
Query: 147 AVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLES 205
V YGG+++ H L K N P I++GTPGRILAL R+K + ++HF+LDECDK LE
Sbjct: 185 EVVYGGISMNKHVVLFKGNNIPHIIIGTPGRILALIREKYMLTDKIQHFVLDECDKCLER 244
Query: 206 LDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQ 265
LDMR DVQ+IF TP KQVM FSAT++KE+R VCKKF+Q+P+EI++DDEAKL LHGL+Q
Sbjct: 245 LDMRGDVQKIFISTPLKKQVMFFSATMAKEMRDVCKKFLQNPVEIFIDDEAKLKLHGLLQ 304
Query: 266 HYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQE 325
HY+KL E +K RKL ++LDAL+FNQV+IFVKSV+RA L+KLL ECNFPSI IH G++QE
Sbjct: 305 HYVKLQEKDKTRKLIEILDALEFNQVIIFVKSVTRAITLDKLLTECNFPSISIHGGLNQE 364
Query: 326 ERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTK 385
ER+ RY FK+ RILV+TDL GRGIDIER+NIVINYDMP+++D+YLHRVGRAGRFGTK
Sbjct: 365 ERIERYDKFKKFENRILVSTDLFGRGIDIERINIVINYDMPENSDSYLHRVGRAGRFGTK 424
Query: 386 GLAITFVSSASDSDILNQV 404
GLAITFVSS D+ LN+V
Sbjct: 425 GLAITFVSSQEDTLALNEV 443
>gi|146419497|ref|XP_001485710.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 370
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 236/339 (69%), Positives = 283/339 (83%), Gaps = 3/339 (0%)
Query: 72 VQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 131
VQ CIPQ+ILG DV+CQAKSG+GKTAVFVLSTLQQ +P PG++T LV+CHTRELAYQI
Sbjct: 12 VQQVCIPQSILGTDVLCQAKSGLGKTAVFVLSTLQQLDPVPGEITTLVICHTRELAYQIR 71
Query: 132 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLK 189
+E+ RFS Y+PD+K VFYGG+ I + LKN+ CP IVV TPGR+ AL +K + L
Sbjct: 72 NEYARFSKYMPDVKTEVFYGGIPIAKDIEKLKNKDTCPHIVVATPGRLHALVEEKAIRLN 131
Query: 190 NVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPME 249
NV+ F++DECDK+LE++DMRRDVQ+IF+ TPH KQVMMFSATLS+EIRPVCKKFMQ+P+E
Sbjct: 132 NVKSFVIDECDKVLEAIDMRRDVQDIFRNTPHQKQVMMFSATLSQEIRPVCKKFMQNPLE 191
Query: 250 IYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLV 309
IYVDDEAKLTLHGL Q+Y+KL E EKNRKL DLLD+L+FNQV+IFVKS RA ELNKLLV
Sbjct: 192 IYVDDEAKLTLHGLQQYYLKLDEKEKNRKLADLLDSLEFNQVIIFVKSTLRANELNKLLV 251
Query: 310 ECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSA 369
NFPSI +HS M QEER+ RYK FKE NKRI V+TD+ GRGIDIER+N+ INYD+P+ A
Sbjct: 252 ASNFPSIAVHSAMPQEERIARYKSFKEFNKRICVSTDVFGRGIDIERINLAINYDLPNEA 311
Query: 370 DTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV-SKF 407
D YLHRVGRAGRFGTKGLAI+FV S D ++L ++ S+F
Sbjct: 312 DQYLHRVGRAGRFGTKGLAISFVGSKEDEEVLEKIQSRF 350
>gi|221053125|ref|XP_002257937.1| helicase [Plasmodium knowlesi strain H]
gi|193807769|emb|CAQ38474.1| helicase, putative [Plasmodium knowlesi strain H]
Length = 472
Score = 499 bits (1286), Expect = e-139, Method: Compositional matrix adjust.
Identities = 255/448 (56%), Positives = 314/448 (70%), Gaps = 48/448 (10%)
Query: 4 TRDNEYEDELLDYEEEDAQAPDSVATKANGE---------------AAKKGYVGIHSSGF 48
T D+ +DEL+DYE+ D D+ K N + A + Y +H+ GF
Sbjct: 3 TMDHSVQDELVDYED-DENILDAKDVKGNLDNSLLNNNNKGVNENGAMRGSYATVHTGGF 61
Query: 49 RDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQT 108
+DF LKPELLRAI +SGFEHPSEVQ E IP AI G D++CQAKSGMGKTAVFVLS LQQ
Sbjct: 62 KDFFLKPELLRAISESGFEHPSEVQQETIPAAITGTDILCQAKSGMGKTAVFVLSILQQL 121
Query: 109 EPNPGQ-------------------------------VTALVLCHTRELAYQICHEFERF 137
E N + V L L HTRELAYQI +EF+RF
Sbjct: 122 ETNDEKDIKDEKEMNSSTSNNIGGGLTNGDGASKNKFVRCLGLAHTRELAYQIKNEFDRF 181
Query: 138 STYLPDIKVAVFYGGVNIKIHKDLLKNEC-PQIVVGTPGRILALARDKDLSLKNVRHFIL 196
S YL ++ V YGG+++ H + K E P I++GTPGRILAL R+K L ++HF+L
Sbjct: 182 SKYLKGVRCEVVYGGISMSKHIKMFKEESIPHIIIGTPGRILALIREKYLLTDKIQHFVL 241
Query: 197 DECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEA 256
DECDK LE LDMR DVQ+IF TP KQVM FSAT++KE+R VCKKF+Q+P+EI++DDEA
Sbjct: 242 DECDKCLEKLDMRSDVQKIFISTPLKKQVMFFSATMAKEMRDVCKKFLQNPVEIFIDDEA 301
Query: 257 KLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSI 316
KL LHGL+QHY+KL E +K RKL ++LDAL+FNQV+IFVKSV+RA L+KLL ECNFPSI
Sbjct: 302 KLKLHGLLQHYVKLQEKDKTRKLIEILDALEFNQVIIFVKSVTRAITLDKLLTECNFPSI 361
Query: 317 CIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRV 376
IH G+ Q+ER+ RY FK+ RILV+TDL GRGIDIER+NIVINYDMP+++D+YLHRV
Sbjct: 362 AIHGGLDQQERIERYDKFKKFENRILVSTDLFGRGIDIERINIVINYDMPENSDSYLHRV 421
Query: 377 GRAGRFGTKGLAITFVSSASDSDILNQV 404
GRAGRFGTKGLA+TFVSS D+ LN+V
Sbjct: 422 GRAGRFGTKGLAVTFVSSQEDTLALNEV 449
>gi|403358218|gb|EJY78746.1| ATP-dependent RNA helicase DDX39 [Oxytricha trifallax]
Length = 432
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 237/415 (57%), Positives = 314/415 (75%), Gaps = 2/415 (0%)
Query: 1 MGETRDNEYEDELLDYEEEDAQAPDSVATKANGEAAKKG--YVGIHSSGFRDFLLKPELL 58
+ + D +Y+ + + E+ Q + N K Y GI++SGF+DFLLKPEL
Sbjct: 4 LNQLPDYDYDVDQPGFGEDQNQMNQGYGQQGNYFQQSKPLMYSGINTSGFKDFLLKPELQ 63
Query: 59 RAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTAL 118
RAI++ GFEHPSEVQ ECIPQA +G+D++CQAKSGMGKTAVFVL+TL Q + P +T L
Sbjct: 64 RAIIECGFEHPSEVQQECIPQASMGVDILCQAKSGMGKTAVFVLTTLHQLDQEPKPLTVL 123
Query: 119 VLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRIL 178
VLCHTRELA+QI E++RF+ YL + V YGG I+ H+ LL+++ P I+VGTPGR L
Sbjct: 124 VLCHTRELAHQIKKEYDRFTKYLDKVSCEVIYGGQPIQTHQKLLQDKPPTIIVGTPGRTL 183
Query: 179 ALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRP 238
AL + + L +N+++F+LDECDKML LDMR+DVQ IFKMTP+ KQVMMFSATL ++IR
Sbjct: 184 ALVKSQHLKFENLKYFVLDECDKMLSELDMRQDVQSIFKMTPYQKQVMMFSATLGQDIRK 243
Query: 239 VCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSV 298
VCKKFM++P EIY+D++ KLTLHGL Q+ +KL+E K +KL +LLD+L FNQV+IFVK+
Sbjct: 244 VCKKFMKNPFEIYIDNDIKLTLHGLQQYTVKLAEDSKTKKLIELLDSLLFNQVIIFVKTS 303
Query: 299 SRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVN 358
RA L+KLL++ NFPS IH G+ Q+ER+ R++ FKE +RI+VATDL GRGIDIE++N
Sbjct: 304 QRAEALSKLLLKQNFPSTFIHGGLPQDERIKRFQNFKEFKQRIMVATDLFGRGIDIEKIN 363
Query: 359 IVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKFMFLLIG 413
IV NYDMP+S+D YLHRV RAGRFGTKGLAI+FV++ D++IL + K + +G
Sbjct: 364 IVFNYDMPESSDQYLHRVARAGRFGTKGLAISFVTTKEDNEILEETQKRFEVKVG 418
>gi|348688601|gb|EGZ28415.1| hypothetical protein PHYSODRAFT_309277 [Phytophthora sojae]
Length = 425
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 234/325 (72%), Positives = 275/325 (84%), Gaps = 1/325 (0%)
Query: 84 MDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPD 143
MD+ICQAKSGMGKTAVFVL+TL Q EP GQ++ +V+CHTRELA+QI HE+ERFS YL D
Sbjct: 1 MDIICQAKSGMGKTAVFVLATLHQIEPVDGQISVVVMCHTRELAFQIAHEYERFSKYLVD 60
Query: 144 IKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 203
+K VFYGGV I +++ LKN P I+VGTPGRIL L R+K L L V+HF++DECDKML
Sbjct: 61 VKTGVFYGGVPISQNREALKNNPPHILVGTPGRILGLLREKTLKLDKVKHFVMDECDKML 120
Query: 204 ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGL 263
E++DMRRD+QEIFK TPHDKQVMMFSATLSKEIRPVC+KF QDPMEIYVDDE KLTLHGL
Sbjct: 121 EAIDMRRDIQEIFKATPHDKQVMMFSATLSKEIRPVCRKFCQDPMEIYVDDETKLTLHGL 180
Query: 264 VQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMS 323
Q+YIKL E EKNRKLNDLLDAL+FNQVVIFV +R ELN+LL ECNFPSICI + +S
Sbjct: 181 QQYYIKLEESEKNRKLNDLLDALEFNQVVIFVSKKNRGRELNRLLNECNFPSICITADLS 240
Query: 324 QEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 383
QEER+ RYK FK+ KRILV TDL GRG+DIERVNIV+NYD P+ +D YLHRVGRAGRFG
Sbjct: 241 QEERIKRYKSFKDFQKRILVTTDLFGRGMDIERVNIVVNYDFPNDSDQYLHRVGRAGRFG 300
Query: 384 TKGLAITFVSSASDSDILNQV-SKF 407
TKGL+I+F+SS D+++L +V S+F
Sbjct: 301 TKGLSISFISSEEDTEMLAKVQSRF 325
>gi|258569076|ref|XP_002585282.1| ATP-dependent RNA helicase SUB2 [Uncinocarpus reesii 1704]
gi|237906728|gb|EEP81129.1| ATP-dependent RNA helicase SUB2 [Uncinocarpus reesii 1704]
Length = 564
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 235/340 (69%), Positives = 284/340 (83%), Gaps = 2/340 (0%)
Query: 69 PSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAY 128
P VQ CIP AIL +DV+CQAKSG+GKTAVFVL+TL Q EP PG+ + LV+CHTRELAY
Sbjct: 204 PHTVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTLHQLEPVPGECSILVMCHTRELAY 263
Query: 129 QICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL--KNECPQIVVGTPGRILALARDKDL 186
QI +E+ RFS YLPD+K AVFYGG ++ + L K+ P IVVGTPGR+ AL R+K L
Sbjct: 264 QIKNEYARFSKYLPDVKTAVFYGGTPMQKDIETLSSKDTYPNIVVGTPGRLNALVREKKL 323
Query: 187 SLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQD 246
SL+N++ F+LDECDKML+ +DMRRDVQEIF+ TP +KQV+MFSATLS+EIRP+CKKFM++
Sbjct: 324 SLRNIKAFVLDECDKMLDQIDMRRDVQEIFRATPAEKQVLMFSATLSQEIRPICKKFMRN 383
Query: 247 PMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNK 306
P+E+YVDD+ KLTLHGL Q++IKLSE EKNRKLN+LLD L+FNQV+IFVKS SRA EL+K
Sbjct: 384 PLEVYVDDDTKLTLHGLQQYFIKLSESEKNRKLNELLDNLEFNQVIIFVKSTSRANELDK 443
Query: 307 LLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMP 366
LL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD+ GRGIDIER+N+ INYDMP
Sbjct: 444 LLRECNFPSIAVHSGVSQEERIKRYKEFKEFNKRICVATDVFGRGIDIERINLAINYDMP 503
Query: 367 DSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
AD+YLHRVGRAGRFGTKGL+I+FVSS D +L + K
Sbjct: 504 ADADSYLHRVGRAGRFGTKGLSISFVSSEDDMKVLKDIEK 543
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 50/82 (60%), Gaps = 18/82 (21%)
Query: 9 YEDELLDYEEEDAQAPDSVA-----------------TKANGEAAKKG-YVGIHSSGFRD 50
+E++L+DY +E+ Q D+ A T A A KKG YVG+HS+GFRD
Sbjct: 3 HEEDLIDYSDEELQTTDAAATAAAPATNGAAAKKGDLTVAGARADKKGSYVGVHSTGFRD 62
Query: 51 FLLKPELLRAIVDSGFEHPSEV 72
FLLK ELLRAI D GFEHPSE
Sbjct: 63 FLLKGELLRAITDCGFEHPSEA 84
>gi|299116076|emb|CBN74492.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 865
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 244/347 (70%), Positives = 285/347 (82%), Gaps = 4/347 (1%)
Query: 40 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 99
YVGIH+SGFRDFLLKPELLRA+VD GFEHPSEVQHECIPQAILG+D++CQAKSGMGKTAV
Sbjct: 53 YVGIHASGFRDFLLKPELLRAVVDCGFEHPSEVQHECIPQAILGVDIVCQAKSGMGKTAV 112
Query: 100 FVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHK 159
FVL+TL Q P PG+V+ LVLCHTRELA+QI E+ERF +LP++KVAV YGG+ ++ +
Sbjct: 113 FVLATLHQLNPQPGEVSCLVLCHTRELAWQIAREYERFCKHLPEVKVAVLYGGLPVQKQR 172
Query: 160 DLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
++LKN+ P IVVG PGR++ L R+ DL + +++F+LDECDKML+ DMR VQEIF T
Sbjct: 173 EMLKNDTPHIVVGCPGRVMQLVREGDLKVDKLQYFVLDECDKMLDQKDMRAQVQEIFFKT 232
Query: 220 PHDKQVMMFSATLSKEIRPVCKKFMQD-PMEIYVDDEAKLTLHGLVQHYIKLSELEKNRK 278
PH KQVMMFSATLS E+RP+C+KF + PMEIYVDDE KLTLHGL Q+YIKL+E EKNRK
Sbjct: 233 PHTKQVMMFSATLSPEVRPICRKFCHEKPMEIYVDDETKLTLHGLQQYYIKLAETEKNRK 292
Query: 279 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGN 338
LNDLLD LDFNQVVIF V RA EL++LL CNFPS+ IHS + QEER RYK FK
Sbjct: 293 LNDLLDLLDFNQVVIFCSKVDRAVELDRLLNLCNFPSLVIHSRLKQEERTNRYKQFKNFE 352
Query: 339 KRILVATDLVGRGIDIERVNIVINYDMP---DSADTYLHRVGRAGRF 382
KRILVATDL GRGIDIERVNIV+NYD P D +D YLHRVGRAGR
Sbjct: 353 KRILVATDLFGRGIDIERVNIVVNYDFPDGDDGSDQYLHRVGRAGRL 399
>gi|255548938|ref|XP_002515525.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223545469|gb|EEF46974.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 275
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 250/266 (93%), Positives = 256/266 (96%), Gaps = 1/266 (0%)
Query: 1 MGETRDNE-YEDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLR 59
MGETRDN+ YE+ELLDYEEE+ +APDSVA K NGE+AKKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1 MGETRDNDAYEEELLDYEEEEEKAPDSVAAKVNGESAKKGYVGIHSSGFRDFLLKPELLR 60
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ EP GQV ALV
Sbjct: 61 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPTSGQVIALV 120
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA 179
LCHTRELAYQICHEFERFSTYLPD KVAVFYGGV+IKIHKDLLKNECP IVVGTPGRILA
Sbjct: 121 LCHTRELAYQICHEFERFSTYLPDTKVAVFYGGVHIKIHKDLLKNECPHIVVGTPGRILA 180
Query: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240
Query: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQ 265
CKKFMQDPMEIYVDDEAKLTLHGLVQ
Sbjct: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQ 266
>gi|346325305|gb|EGX94902.1| ATP-dependent RNA helicase SUB2 [Cordyceps militaris CM01]
Length = 740
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 231/346 (66%), Positives = 277/346 (80%), Gaps = 2/346 (0%)
Query: 72 VQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 131
VQ CIPQA+LG D+ICQAKSG+GKTAVFVL+TLQQ EP G+V+ +V+CHTRELAYQI
Sbjct: 382 VQQTCIPQALLGGDIICQAKSGLGKTAVFVLATLQQVEPVNGEVSVVVMCHTRELAYQIR 441
Query: 132 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLK 189
E+ RFS Y+PDIK VFYGG IK + LKN+ CP I+VGTPGR+ AL RDK L L
Sbjct: 442 DEYNRFSKYMPDIKTGVFYGGTPIKTDMETLKNKDTCPHIIVGTPGRLKALVRDKALRLG 501
Query: 190 NVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPME 249
+VR F+LDECDKML+ DMR DVQ++F+ TPH KQVMMFSATLS+E++P+CKKFMQ+P E
Sbjct: 502 SVRIFVLDECDKMLDQPDMRTDVQDVFRATPHQKQVMMFSATLSEEVKPICKKFMQNPTE 561
Query: 250 IYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLV 309
YVD++ KLTLHGL Q+YIKL E EKNRKLNDLLD L FNQV+IFV+S RA EL+KLL
Sbjct: 562 HYVDEDTKLTLHGLQQYYIKLDEKEKNRKLNDLLDELQFNQVIIFVRSTVRATELDKLLR 621
Query: 310 ECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSA 369
ECNFPSI +HSG+SQEER+ RYK FKE KRI VATD+ GRGIDIER+N+ INYD+ A
Sbjct: 622 ECNFPSIAVHSGVSQEERIRRYKEFKEFKKRICVATDVFGRGIDIERINLAINYDLSADA 681
Query: 370 DTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKFMFLLIGSF 415
+YLHRVGRAGRFGTKGLAI+F+SS D +L ++ K + + F
Sbjct: 682 SSYLHRVGRAGRFGTKGLAISFISSEDDQKVLGEIEKRFEVALPEF 727
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 52/71 (73%), Gaps = 8/71 (11%)
Query: 9 YEDELLDYEEEDAQAPDS--VATK-----ANGEAAKKG-YVGIHSSGFRDFLLKPELLRA 60
+E++L+DY +E+ A ++ ATK AN KKG YVGIHS+GFRDFLLKPELLRA
Sbjct: 237 HEEDLIDYSDEEIGANETANTATKKGELAANSNVDKKGSYVGIHSTGFRDFLLKPELLRA 296
Query: 61 IVDSGFEHPSE 71
I D GFEHPSE
Sbjct: 297 IGDCGFEHPSE 307
>gi|326483516|gb|EGE07526.1| ATP-dependent RNA helicase SUB2 [Trichophyton equinum CBS 127.97]
Length = 396
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 242/403 (60%), Positives = 299/403 (74%), Gaps = 37/403 (9%)
Query: 10 EDELLDYEEEDAQAPDSVATKA----NGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSG 65
E++L+DY +E+ Q D+ A A NG+A+KKG
Sbjct: 4 EEDLIDYSDEELQTTDAAAAPAAPAANGDASKKG-------------------------- 37
Query: 66 FEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRE 125
++ CIP AIL +DV+CQAKSG+GKTAVF L+TL Q EP PG + LV+C TRE
Sbjct: 38 -----DLTQVCIPTAILNVDVLCQAKSGLGKTAVFALTTLHQLEPVPGTCSILVMCPTRE 92
Query: 126 LAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL--KNECPQIVVGTPGRILALARD 183
LAYQI E+ RFS Y+PD+K AVFYGG I+ ++L K+ P I+VGTPGR+ AL RD
Sbjct: 93 LAYQIKDEYARFSKYMPDVKTAVFYGGTPIQKDIEILSSKDTHPNIIVGTPGRLNALLRD 152
Query: 184 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF 243
K LSL+N++ F+LDECDKML+ DMR DVQEIF+ TP DKQVMMFSATL++EIRP+CKKF
Sbjct: 153 KKLSLRNIKSFVLDECDKMLDQKDMRADVQEIFRSTPADKQVMMFSATLAQEIRPICKKF 212
Query: 244 MQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAE 303
M++P+E+YVDD+ KLTLHGL Q+YIKLSE EKNRKLN+LLD L+FNQV+IFVKS RA E
Sbjct: 213 MRNPLEVYVDDDTKLTLHGLQQYYIKLSEAEKNRKLNELLDNLEFNQVIIFVKSTVRATE 272
Query: 304 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 363
L+KLL ECNFPSI +HSG+SQEER+ RY+ FKE NKRI VATD+ GRGIDIER+N+ INY
Sbjct: 273 LDKLLRECNFPSIAVHSGVSQEERIKRYREFKEFNKRICVATDVFGRGIDIERINLAINY 332
Query: 364 DMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
DMP AD+YLHRVGRAGRFGTKGL+I+FVS + +L + K
Sbjct: 333 DMPIDADSYLHRVGRAGRFGTKGLSISFVSDEENMQVLKDIEK 375
>gi|410929731|ref|XP_003978253.1| PREDICTED: ATP-dependent RNA helicase DDX39A-like [Takifugu
rubripes]
Length = 425
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 232/384 (60%), Positives = 295/384 (76%), Gaps = 2/384 (0%)
Query: 23 APDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAIL 82
AP+S T +N E + + H++GFRDFLLKPELLRAIVD GFEHPS+VQHECIPQAIL
Sbjct: 21 APES-GTSSNKEI-EGAFRAFHTAGFRDFLLKPELLRAIVDCGFEHPSKVQHECIPQAIL 78
Query: 83 GMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLP 142
GMD++C+A+SGMGKTAVFVL+TLQQ +P GQV+ LV+CHTRELA++I E+ERFS Y+P
Sbjct: 79 GMDILCEAQSGMGKTAVFVLATLQQIKPVDGQVSVLVMCHTRELAFKISKEYERFSKYMP 138
Query: 143 DIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKM 202
+KV+VF+GG+ I+ K +LK CP I+VG PGRI L + LSLKN++HF+LDECDKM
Sbjct: 139 TVKVSVFFGGLTIRKDKAVLKKNCPHIIVGNPGRIYTLILQRSLSLKNIKHFVLDECDKM 198
Query: 203 LESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHG 262
LE LDMR DVQEIF+MTP KQVMMFSATLS+E+RPVC+ FM+DP+E++ DD+ + +LHG
Sbjct: 199 LEQLDMRGDVQEIFQMTPDKKQVMMFSATLSEEVRPVCRMFMRDPLELFADDDPQPSLHG 258
Query: 263 LVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGM 322
L Q+Y +L EK RKL DLL+ + FNQV IFVK+V L+ LLVE FP+I +H M
Sbjct: 259 LEQYYCRLKVHEKTRKLFDLLELMVFNQVAIFVKTVQHCVALSHLLVEQVFPAIAVHRDM 318
Query: 323 SQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRF 382
+QEERL+R++ FK +ILVAT+L + +D E +N+V NYD P+ +DTY HRV RA F
Sbjct: 319 AQEERLSRFEQFKNLQWQILVATNLFDQEMDTEFINVVFNYDTPEDSDTYFHRVARARSF 378
Query: 383 GTKGLAITFVSSASDSDILNQVSK 406
TK L ITFVS D ILN+V +
Sbjct: 379 RTKVLVITFVSDEDDVMILNEVQQ 402
>gi|217330694|gb|ACK38186.1| unknown [Medicago truncatula]
gi|218506067|gb|ACK77675.1| unknown [Medicago truncatula]
Length = 278
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 244/280 (87%), Positives = 254/280 (90%), Gaps = 3/280 (1%)
Query: 1 MGETRDNEYEDELLDYEEEDA-QAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLR 59
MGE +D E +E L EE+ +A DS TK E+ KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1 MGELKDTEVYEEELIDYEEEDEKALDS--TKPTTESVKKGYVGIHSSGFRDFLLKPELLR 58
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ +P PGQV ALV
Sbjct: 59 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVPGQVAALV 118
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA 179
LCHTRELAYQICHE ERFSTYLPDIKVAVFYGGVNIK+HKDLLKNECP IVVGTPGRILA
Sbjct: 119 LCHTRELAYQICHEVERFSTYLPDIKVAVFYGGVNIKVHKDLLKNECPHIVVGTPGRILA 178
Query: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
L RD+DL LKNVRHFILDECDKMLESLDMR+DVQEIFK+TPHDKQVMMFSATLSKEIRPV
Sbjct: 179 LTRDRDLGLKNVRHFILDECDKMLESLDMRKDVQEIFKLTPHDKQVMMFSATLSKEIRPV 238
Query: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKL 279
CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL E EKNRKL
Sbjct: 239 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQEPEKNRKL 278
>gi|1749748|dbj|BAA13931.1| unnamed protein product [Schizosaccharomyces pombe]
Length = 339
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 230/318 (72%), Positives = 272/318 (85%), Gaps = 2/318 (0%)
Query: 91 KSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFY 150
KSGMGKTAVFVLSTLQQ EP G+V+ LVLCHTRELA+QI +E+ RFS YLPD++ AVFY
Sbjct: 1 KSGMGKTAVFVLSTLQQIEPVDGEVSVLVLCHTRELAFQIKNEYARFSKYLPDVRTAVFY 60
Query: 151 GGVNIKIHKDLLKNEC--PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDM 208
GG+NIK + K++ P IVV TPGR+ AL R+K+L + +V+HF+LDECDK+LES+DM
Sbjct: 61 GGINIKQDMEAFKDKSKSPHIVVATPGRLNALVREKNLKVNSVKHFVLDECDKLLESVDM 120
Query: 209 RRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYI 268
RRD+QE+F+ TP KQVMMFSATLS EIRP+CKKFMQ+P+EIYVDDE KLTLHGL QHY+
Sbjct: 121 RRDIQEVFRATPPQKQVMMFSATLSNEIRPICKKFMQNPLEIYVDDETKLTLHGLQQHYV 180
Query: 269 KLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERL 328
KL E KNRK+NDLLD+L+FNQVVIFVKSVSRA EL++LL ECNFPSICIH G+ QEER+
Sbjct: 181 KLEEKAKNRKINDLLDSLEFNQVVIFVKSVSRANELDRLLRECNFPSICIHGGLPQEERI 240
Query: 329 TRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLA 388
RYK FK+ +KRI VATD+ GRGIDIERVNIVINYDMPDS D+YLHRVGRAGRFGTKGLA
Sbjct: 241 KRYKAFKDFDKRICVATDVFGRGIDIERVNIVINYDMPDSPDSYLHRVGRAGRFGTKGLA 300
Query: 389 ITFVSSASDSDILNQVSK 406
ITF SS DS IL+++ +
Sbjct: 301 ITFSSSEEDSQILDKIQE 318
>gi|401889098|gb|EJT53038.1| ATP dependent RNA helicase [Trichosporon asahii var. asahii CBS
2479]
Length = 968
Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust.
Identities = 242/387 (62%), Positives = 287/387 (74%), Gaps = 48/387 (12%)
Query: 32 NGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQA 90
G+A KKG YVGIHS+GFRDFLLKPE+LRAI D GFEHPSEVQ ECIPQAILG DV+CQA
Sbjct: 136 GGDADKKGSYVGIHSTGFRDFLLKPEILRAISDLGFEHPSEVQQECIPQAILGTDVLCQA 195
Query: 91 KSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFY 150
KSGMGKTAVFVL++LQQ EP G+V+ +VLCHTRELAYQI +EF RFS Y+P+++ +VFY
Sbjct: 196 KSGMGKTAVFVLASLQQLEPVDGEVSIIVLCHTRELAYQIRNEFTRFSKYMPEVRTSVFY 255
Query: 151 GGVNIKIHKDLL--KNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDM 208
GG I +++L K +CP IVVGTPGR++AL RDK L+ V+HF+LDECDKMLE LDM
Sbjct: 256 GGTPISADQEILASKEKCPHIVVGTPGRMMALVRDKKLNASKVKHFVLDECDKMLEQLDM 315
Query: 209 RRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYI 268
RRDVQE+F+ TPH KQVMMFSATLSK+IR CKKFMQ IYVDDE KLTLHGL Q+Y+
Sbjct: 316 RRDVQEVFRATPHHKQVMMFSATLSKDIRATCKKFMQ---SIYVDDETKLTLHGLQQYYL 372
Query: 269 KLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERL 328
KL E EKNRKLNDLLD L+FNQ
Sbjct: 373 KLEEKEKNRKLNDLLDNLEFNQ-------------------------------------- 394
Query: 329 TRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLA 388
++K F+ KRILVATD+ GRGID+ERVN+VINYD P AD+YLHRVGRAGRFGTKGLA
Sbjct: 395 -QFKAFE---KRILVATDIFGRGIDVERVNVVINYDAPADADSYLHRVGRAGRFGTKGLA 450
Query: 389 ITFVSSASDSDILNQVSKFMFLLIGSF 415
ITFVSS +D ++L ++ + + I +
Sbjct: 451 ITFVSSEADQEVLQKIQERFTVAIPTL 477
>gi|403346217|gb|EJY72497.1| putative ATP-dependent RNA helicase [Oxytricha trifallax]
Length = 422
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 234/401 (58%), Positives = 303/401 (75%), Gaps = 11/401 (2%)
Query: 8 EYEDELLDYEEEDAQAPDSVATKANGEAAK-KGYVGIHSSGFRDFLLKPELLRAIVDSGF 66
+YE ++ D EE+ Q NG A + Y G+ S+GF+D LLKP+L RAI + GF
Sbjct: 10 DYEYDIDDNNEEEKQ---------NGAAGRMTAYTGVLSAGFKDLLLKPQLQRAITECGF 60
Query: 67 EHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTREL 126
EHPSEVQ ECIPQA++G+DV+CQAKSGMGKTAVFVL+ L Q +P V+AL+LCHTREL
Sbjct: 61 EHPSEVQQECIPQAMIGVDVLCQAKSGMGKTAVFVLTILHQLPDDPKPVSALILCHTREL 120
Query: 127 AYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKN-ECPQIVVGTPGRILALARDKD 185
AYQI +EF RF+ YLPDI+ V YGG I+ +LK + P IVVGTPGRI L KD
Sbjct: 121 AYQIKNEFARFTRYLPDIRTEVIYGGQPIQDQIQMLKGVKPPHIVVGTPGRIKHLVNKKD 180
Query: 186 LSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQ 245
L L ++ F+LDECDKMLE DMR DVQ+IF TPH KQV MFSATLS +++ +C++FM+
Sbjct: 181 LDLSGLKIFVLDECDKMLEETDMRSDVQQIFMATPHQKQVCMFSATLSTDVKKICRRFMK 240
Query: 246 DPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELN 305
+P EI++D++ KLTLHGL Q+Y+KL E +K +KL DLLD+L FNQV++FVKSV A +L+
Sbjct: 241 NPFEIFIDNQNKLTLHGLKQYYLKLEENQKTKKLTDLLDSLMFNQVIVFVKSVDFAIKLD 300
Query: 306 KLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDM 365
++L NFPSI IH ++Q+ER+ RY FK+ RI+VATD+ GRGIDIE++N+V NY+M
Sbjct: 301 EILRRDNFPSISIHRDLAQDERIKRYNEFKQFKYRIMVATDIFGRGIDIEKINVVFNYNM 360
Query: 366 PDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
P+ +D+YLHRVGRAGRFGTKGLAITFVS A D ++L ++ K
Sbjct: 361 PNDSDSYLHRVGRAGRFGTKGLAITFVSGAKDLEVLEEIQK 401
>gi|406699078|gb|EKD02297.1| ATP dependent RNA helicase [Trichosporon asahii var. asahii CBS
8904]
Length = 391
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 252/419 (60%), Positives = 302/419 (72%), Gaps = 57/419 (13%)
Query: 8 EYEDELLDYEEEDAQAPDSVATKA--------NGEAAKKG-YVGIHSSGFRDFLLKPELL 58
E +EL+DY++E A+ P T A G+A KKG YVGIHS+GFRDFLLKPE+L
Sbjct: 7 EDPEELVDYDDE-AEEPYVAPTTAAPAAAGVDGGDADKKGSYVGIHSTGFRDFLLKPEIL 65
Query: 59 RAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTAL 118
RAI D GFEHPSEVQ ECIPQAILG DV+CQAKSGMGKTAVFVL++LQQ EP G+V+ +
Sbjct: 66 RAISDLGFEHPSEVQQECIPQAILGTDVLCQAKSGMGKTAVFVLASLQQLEPVDGEVSII 125
Query: 119 VLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL--KNECPQIVVGTPGR 176
VLCHTRELAYQI +EF RFS Y+P+++ +VFYGG I +++L K +CP IVVGTPGR
Sbjct: 126 VLCHTRELAYQIRNEFTRFSKYMPEVRTSVFYGGTPISADQEILASKEKCPHIVVGTPGR 185
Query: 177 ILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEI 236
++AL RDK L+ V+HF+LDECDKMLE LDMRRDVQE+F+ TPH KQVMMFSATLSK+I
Sbjct: 186 MMALVRDKKLNASKVKHFVLDECDKMLEQLDMRRDVQEVFRATPHHKQVMMFSATLSKDI 245
Query: 237 RPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVK 296
R CKKFMQ IYVDDE KLTLHGL Q+Y+KL E EKNRKLNDLLD L+FNQ
Sbjct: 246 RATCKKFMQ---SIYVDDETKLTLHGLQQYYLKLEEKEKNRKLNDLLDNLEFNQ------ 296
Query: 297 SVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIER 356
++K F+ KRILVATD+ GRGID+ER
Sbjct: 297 ---------------------------------QFKAFE---KRILVATDIFGRGIDVER 320
Query: 357 VNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKFMFLLIGSF 415
VN+VINYD P AD+YLHRVGRAGRFGTKGLAITFVSS +D ++L ++ + + I +
Sbjct: 321 VNVVINYDAPADADSYLHRVGRAGRFGTKGLAITFVSSEADQEVLQKIQERFTVAIPTL 379
>gi|302500115|ref|XP_003012052.1| hypothetical protein ARB_01808 [Arthroderma benhamiae CBS 112371]
gi|291175607|gb|EFE31412.1| hypothetical protein ARB_01808 [Arthroderma benhamiae CBS 112371]
Length = 620
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 228/336 (67%), Positives = 275/336 (81%), Gaps = 2/336 (0%)
Query: 73 QHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICH 132
Q CIP AIL +DV+CQAKSG+GKTAVF L+TL Q EP PG + LV+C TRELAYQI
Sbjct: 264 QQVCIPTAILNVDVLCQAKSGLGKTAVFALTTLHQLEPVPGTCSILVMCPTRELAYQIKD 323
Query: 133 EFERFSTYLPDIKVAVFYGGVNIKIHKDLL--KNECPQIVVGTPGRILALARDKDLSLKN 190
E+ RFS Y+PD+K AVFYGG I+ ++L K+ P I+VGTPGR+ AL RDK LSL+N
Sbjct: 324 EYARFSKYMPDVKTAVFYGGTPIQKDIEILSSKDTHPNIIVGTPGRLNALLRDKKLSLRN 383
Query: 191 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 250
++ F+LDECDKML+ DMR DVQEIF+ TP DKQVMMFSATL++EIRP+CKKFM++P+E+
Sbjct: 384 IKSFVLDECDKMLDQKDMRADVQEIFRSTPADKQVMMFSATLAQEIRPICKKFMRNPLEV 443
Query: 251 YVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 310
YVDD+ KLTLHGL Q+YIKLSE EKNRKLN+LLD L+FNQV+IFVKS RA EL+KLL E
Sbjct: 444 YVDDDTKLTLHGLQQYYIKLSEAEKNRKLNELLDNLEFNQVIIFVKSTVRATELDKLLRE 503
Query: 311 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 370
CNFPSI +HSG+SQEER+ RY+ FKE NKRI VATD+ GRGIDIER+N+ INYDMP AD
Sbjct: 504 CNFPSIAVHSGVSQEERIKRYREFKEFNKRICVATDVFGRGIDIERINLAINYDMPIDAD 563
Query: 371 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
+YLHRVGRAGRFGTKGL+I+FVS + +L + K
Sbjct: 564 SYLHRVGRAGRFGTKGLSISFVSDEENMQVLKDIEK 599
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 53/84 (63%), Gaps = 18/84 (21%)
Query: 10 EDELLDYEEEDAQAPDSVATKA----NGEAAKKG--------------YVGIHSSGFRDF 51
E++L+DY +E+ Q D+ A A NG+A+KKG YVGIHS+GFRDF
Sbjct: 83 EEDLIDYSDEELQTTDAAAAPAAPAANGDASKKGDLTVGGAGADKKGSYVGIHSTGFRDF 142
Query: 52 LLKPELLRAIVDSGFEHPSEVQHE 75
LK ELLRAI D GFEHPSE HE
Sbjct: 143 YLKAELLRAITDCGFEHPSEAIHE 166
>gi|302661414|ref|XP_003022375.1| hypothetical protein TRV_03502 [Trichophyton verrucosum HKI 0517]
gi|291186317|gb|EFE41757.1| hypothetical protein TRV_03502 [Trichophyton verrucosum HKI 0517]
Length = 541
Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust.
Identities = 228/336 (67%), Positives = 274/336 (81%), Gaps = 2/336 (0%)
Query: 73 QHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICH 132
Q CIP AIL +DV+CQAKSG+GKTAVF L+TL Q EP PG + LV+C TRELAYQI
Sbjct: 185 QQVCIPTAILNVDVLCQAKSGLGKTAVFALTTLHQLEPVPGTCSILVMCPTRELAYQIKD 244
Query: 133 EFERFSTYLPDIKVAVFYGGVNIKIHKDLL--KNECPQIVVGTPGRILALARDKDLSLKN 190
E+ RFS Y+PD+K AVFYGG I+ ++L K P I+VGTPGR+ AL RDK LSL+N
Sbjct: 245 EYARFSKYMPDVKTAVFYGGTPIQKDIEILSSKETHPNIIVGTPGRLNALLRDKKLSLRN 304
Query: 191 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 250
++ F+LDECDKML+ DMR DVQEIF+ TP DKQVMMFSATL++EIRP+CKKFM++P+E+
Sbjct: 305 IKSFVLDECDKMLDQKDMRADVQEIFRSTPADKQVMMFSATLAQEIRPICKKFMRNPLEV 364
Query: 251 YVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 310
YVDD+ KLTLHGL Q+YIKLSE EKNRKLN+LLD L+FNQV+IFVKS RA EL+KLL E
Sbjct: 365 YVDDDTKLTLHGLQQYYIKLSEAEKNRKLNELLDNLEFNQVIIFVKSTVRATELDKLLRE 424
Query: 311 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 370
CNFPSI +HSG+SQEER+ RY+ FKE NKRI VATD+ GRGIDIER+N+ INYDMP AD
Sbjct: 425 CNFPSIAVHSGVSQEERIKRYREFKEFNKRICVATDVFGRGIDIERINLAINYDMPIDAD 484
Query: 371 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
+YLHRVGRAGRFGTKGL+I+FVS + +L + K
Sbjct: 485 SYLHRVGRAGRFGTKGLSISFVSDEENMQVLKDIEK 520
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 53/84 (63%), Gaps = 18/84 (21%)
Query: 10 EDELLDYEEEDAQAPDSVATKA----NGEAAKKG--------------YVGIHSSGFRDF 51
E++L+DY +E+ Q D+ A A NG+A+KKG YVGIHS+GFRDF
Sbjct: 4 EEDLIDYSDEELQTTDAAAAPAAPAANGDASKKGDLTVGGAGADKKGSYVGIHSTGFRDF 63
Query: 52 LLKPELLRAIVDSGFEHPSEVQHE 75
LK ELLRAI D GFEHPSE HE
Sbjct: 64 YLKAELLRAITDCGFEHPSEAIHE 87
>gi|342874043|gb|EGU76118.1| hypothetical protein FOXB_13364 [Fusarium oxysporum Fo5176]
Length = 495
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 226/337 (67%), Positives = 274/337 (81%), Gaps = 2/337 (0%)
Query: 72 VQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 131
+Q CIPQA+LG D+ICQAKSG+GKTAVFVL+TLQQ EP G+V+ +V+CHTRELAYQI
Sbjct: 137 LQQTCIPQALLGGDIICQAKSGLGKTAVFVLATLQQVEPVNGEVSVVVMCHTRELAYQIR 196
Query: 132 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLK 189
E+ RFS Y+PDIK VFYGG IK + LKN+ CP I+VGTPGR+ AL RDK L L
Sbjct: 197 DEYNRFSKYMPDIKTGVFYGGTPIKTDMETLKNKDTCPHIIVGTPGRLKALVRDKALRLG 256
Query: 190 NVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPME 249
+VR F+LDECDKML+ DMR DVQ++F+ TP KQVMMFSATLS+E++P+C+KFMQ+P E
Sbjct: 257 SVRIFVLDECDKMLDQPDMRTDVQDVFRATPPQKQVMMFSATLSEEVKPICRKFMQNPTE 316
Query: 250 IYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLV 309
YVD++ KLTLHGL Q YIKL E EKNRKLN+LLD L FNQV+IFV+S RA EL+KLL
Sbjct: 317 HYVDEDTKLTLHGLQQFYIKLEEKEKNRKLNELLDELQFNQVIIFVRSTVRATELDKLLR 376
Query: 310 ECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSA 369
ECNFPSI +HSG+SQEER+ RYK FKE KRI VATD+ GRGIDIER+N+ INYD+ + A
Sbjct: 377 ECNFPSIAVHSGVSQEERIRRYKEFKEFKKRICVATDVFGRGIDIERINLAINYDLSNDA 436
Query: 370 DTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
+YLHRVGRAGRFGTKGLAI+FVS+ D ++L ++ K
Sbjct: 437 SSYLHRVGRAGRFGTKGLAISFVSTDQDQEVLKEIEK 473
>gi|346976312|gb|EGY19764.1| ATP-dependent RNA helicase SUB2 [Verticillium dahliae VdLs.17]
Length = 513
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 226/329 (68%), Positives = 272/329 (82%), Gaps = 2/329 (0%)
Query: 80 AILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFST 139
A+LG D+ICQAKSG+GKTAVFVL+TLQQ EP G+V+ LV+CHTRELA+QI +E+ RFS
Sbjct: 163 ALLGGDIICQAKSGLGKTAVFVLTTLQQVEPVAGEVSVLVMCHTRELAFQIRNEYNRFSK 222
Query: 140 YLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILD 197
Y+PDIK VFYGG I+ + +KN+ CP I+VGTPGR+ AL RDK L L +VR F+LD
Sbjct: 223 YMPDIKTGVFYGGTPIQKDVETIKNKDTCPHIIVGTPGRLNALVRDKVLRLGSVRIFVLD 282
Query: 198 ECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAK 257
ECDKML+ +DMRRDVQEIF+ TP KQVMMFSATLS E++P+CKKFMQ+P E YVD++ K
Sbjct: 283 ECDKMLDQIDMRRDVQEIFRATPTQKQVMMFSATLSDEVKPICKKFMQNPTEHYVDEDTK 342
Query: 258 LTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSIC 317
LTLHGL Q+YIKL E EKNRKLN+LLD L FNQV+IFVKS RA EL+KLL ECNFPSI
Sbjct: 343 LTLHGLQQYYIKLEEREKNRKLNELLDDLQFNQVIIFVKSTLRATELDKLLRECNFPSIA 402
Query: 318 IHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 377
+HSG+SQEER+ RYK FK+ NKRI VATD+ GRGIDIER+N+ INYD+P AD+YLHRVG
Sbjct: 403 VHSGVSQEERIRRYKEFKDFNKRICVATDVFGRGIDIERINLAINYDLPGDADSYLHRVG 462
Query: 378 RAGRFGTKGLAITFVSSASDSDILNQVSK 406
RAGRFGTKGLAI+FVS+ D ++L + K
Sbjct: 463 RAGRFGTKGLAISFVSTDGDKEVLAAIEK 491
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 76/141 (53%), Gaps = 28/141 (19%)
Query: 7 NEYEDELLDYEEEDAQAPDSVATKANGEAA------------KKG-YVGIHSSGFRDFLL 53
+ E++L+DY +E+ Q ++ A +NG+ KKG YVGIH++GFRDFLL
Sbjct: 3 GQQEEDLIDYSDEELQTNETAAA-SNGKKGAADAAATGNSVDKKGSYVGIHATGFRDFLL 61
Query: 54 KPELLRAIVDSGFEHPSEVQHECI----PQAILGMDVICQAKSGMGKTAVFVLSTLQQTE 109
KPELLRAI D GFEHPSEV + P++++ VI A +G A V+S
Sbjct: 62 KPELLRAIGDCGFEHPSEVYGSGLVRFFPESMV---VIVAA---LGTEAAHVVSVT---- 111
Query: 110 PNPGQVTALVLCHTRELAYQI 130
P V C T+ A ++
Sbjct: 112 PRAQTPVRAVSCQTKSPASRV 132
>gi|296814418|ref|XP_002847546.1| ATP-dependent RNA helicase sub2 [Arthroderma otae CBS 113480]
gi|238840571|gb|EEQ30233.1| ATP-dependent RNA helicase sub2 [Arthroderma otae CBS 113480]
Length = 561
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 227/333 (68%), Positives = 272/333 (81%), Gaps = 2/333 (0%)
Query: 76 CIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFE 135
CIP AIL +DV+CQAKSG+GKTAVF L+TL Q EP G + LV+C TRELAYQI E+
Sbjct: 208 CIPTAILNVDVLCQAKSGLGKTAVFALTTLHQLEPVAGTCSILVMCPTRELAYQIKDEYA 267
Query: 136 RFSTYLPDIKVAVFYGGVNIKIHKDLL--KNECPQIVVGTPGRILALARDKDLSLKNVRH 193
RFS Y+PD+K AVFYGG I+ ++L K P I+VGTPGR+ AL RDK LSL+N++
Sbjct: 268 RFSKYMPDVKTAVFYGGTPIQKDIEILSSKETHPNIIVGTPGRLNALLRDKKLSLRNIKA 327
Query: 194 FILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVD 253
F+LDECDKML+ DMR DVQEIF+ TP DKQVMMFSATL++EIRPVCKKFM++P+E+YVD
Sbjct: 328 FVLDECDKMLDQKDMRADVQEIFRSTPADKQVMMFSATLAQEIRPVCKKFMRNPLEVYVD 387
Query: 254 DEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNF 313
D+ KLTLHGL Q+YIKLSE EKNRKLN+LLD L+FNQV+IFVKS RA EL+KLL ECNF
Sbjct: 388 DDTKLTLHGLQQYYIKLSEAEKNRKLNELLDNLEFNQVIIFVKSTVRATELDKLLRECNF 447
Query: 314 PSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYL 373
PSI +HSG+SQEER+ RY+ FKE NKRI VATD+ GRGIDIER+N+ INYDMP AD+YL
Sbjct: 448 PSIAVHSGVSQEERIKRYREFKEFNKRICVATDVFGRGIDIERINLAINYDMPIDADSYL 507
Query: 374 HRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
HRVGRAGRFGTKGL+I+FVS + +L + K
Sbjct: 508 HRVGRAGRFGTKGLSISFVSDEENLQVLKDIEK 540
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 48/80 (60%), Gaps = 18/80 (22%)
Query: 10 EDELLDYEEEDAQAPDSVA-----------------TKANGEAAKKG-YVGIHSSGFRDF 51
E++L+DY +E+ Q D+ A T A A KKG YVGIHS+GFRDF
Sbjct: 4 EEDLIDYSDEELQTTDAAAAPAAPAANGDAAKKGDLTVAGAGADKKGSYVGIHSTGFRDF 63
Query: 52 LLKPELLRAIVDSGFEHPSE 71
LK ELLRAI D GFEHPSE
Sbjct: 64 YLKAELLRAITDCGFEHPSE 83
>gi|242809323|ref|XP_002485345.1| ATP dependent RNA helicase (Sub2), putative [Talaromyces stipitatus
ATCC 10500]
gi|218715970|gb|EED15392.1| ATP dependent RNA helicase (Sub2), putative [Talaromyces stipitatus
ATCC 10500]
Length = 349
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 224/328 (68%), Positives = 274/328 (83%), Gaps = 2/328 (0%)
Query: 81 ILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTY 140
+L D++CQAKSG+GKTAVFVL+TL +P G+V LV+CHTRELAYQI +E+ RFS Y
Sbjct: 1 MLHSDLLCQAKSGLGKTAVFVLTTLHGLDPVEGEVQVLVMCHTRELAYQIKNEYARFSKY 60
Query: 141 LPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDE 198
LP +K AVFYGG ++ ++L N+ P IVVGTPGR+ AL RDK LSL+NV+ F+LDE
Sbjct: 61 LPQVKTAVFYGGTPMQKDIEILSNKETRPNIVVGTPGRLNALVRDKKLSLRNVKAFVLDE 120
Query: 199 CDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKL 258
CDKML+ +DMRRDVQEIF+ TP +KQVMMFSATLS+E+RP+CKKFM++P+E+YVDD+ KL
Sbjct: 121 CDKMLDQIDMRRDVQEIFRNTPAEKQVMMFSATLSQEVRPICKKFMRNPLEVYVDDDTKL 180
Query: 259 TLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICI 318
TLHGL Q+YIKLSE EKNRKL+DLLD L+FNQV+IFVKS RA EL+KLL ECNFPSI +
Sbjct: 181 TLHGLQQYYIKLSEQEKNRKLSDLLDNLEFNQVIIFVKSTLRANELDKLLRECNFPSIAV 240
Query: 319 HSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGR 378
HSG+SQEER+ RYK FKE NKRI VATD+ GRGIDIER+N+ INYD+P AD+YLHRVGR
Sbjct: 241 HSGVSQEERIKRYKEFKEFNKRICVATDVFGRGIDIERINLAINYDLPGDADSYLHRVGR 300
Query: 379 AGRFGTKGLAITFVSSASDSDILNQVSK 406
AGRFGTKGL+I+FVSS D +L ++ K
Sbjct: 301 AGRFGTKGLSISFVSSEEDEKVLKEIEK 328
>gi|212537399|ref|XP_002148855.1| ATP dependent RNA helicase (Sub2), putative [Talaromyces marneffei
ATCC 18224]
gi|210068597|gb|EEA22688.1| ATP dependent RNA helicase (Sub2), putative [Talaromyces marneffei
ATCC 18224]
Length = 349
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 224/328 (68%), Positives = 274/328 (83%), Gaps = 2/328 (0%)
Query: 81 ILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTY 140
+L D++CQAKSG+GKTAVFVL+TL +P G+V LV+CHTRELAYQI +E+ RFS Y
Sbjct: 1 MLHSDLLCQAKSGLGKTAVFVLTTLHGLDPVEGEVQVLVMCHTRELAYQIKNEYARFSKY 60
Query: 141 LPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDE 198
LP +K AVFYGG ++ +LL N+ P IVVGTPGR+ AL RDK LSL+NV+ F+LDE
Sbjct: 61 LPQVKTAVFYGGTPMQKDIELLSNKETRPNIVVGTPGRLNALVRDKKLSLRNVKAFVLDE 120
Query: 199 CDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKL 258
CDKML+ +DMRRDVQEIF+ TP +KQVMMFSATLS+E+RP+CKKFM++P+E+YVDD+ KL
Sbjct: 121 CDKMLDQIDMRRDVQEIFRNTPAEKQVMMFSATLSQEVRPICKKFMRNPLEVYVDDDTKL 180
Query: 259 TLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICI 318
TLHGL Q+YIKLSE EKNRKL++LLD L+FNQV+IFVKS RA EL+KLL ECNFPSI +
Sbjct: 181 TLHGLQQYYIKLSEQEKNRKLSELLDNLEFNQVIIFVKSTLRANELDKLLRECNFPSIAV 240
Query: 319 HSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGR 378
HSG+SQEER+ RYK FKE NKRI VATD+ GRGIDIER+N+ INYD+P AD+YLHRVGR
Sbjct: 241 HSGVSQEERIKRYKEFKEFNKRICVATDVFGRGIDIERINLAINYDLPGDADSYLHRVGR 300
Query: 379 AGRFGTKGLAITFVSSASDSDILNQVSK 406
AGRFGTKGL+I+FVSS D +L ++ K
Sbjct: 301 AGRFGTKGLSISFVSSEEDEKVLKEIEK 328
>gi|46128571|ref|XP_388839.1| hypothetical protein FG08663.1 [Gibberella zeae PH-1]
Length = 547
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 227/363 (62%), Positives = 279/363 (76%), Gaps = 18/363 (4%)
Query: 71 EVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 130
++Q CIPQA+LG D+ICQAKSG+GKTAVFVL+TLQQ EP G+V+ +V+CHTRELAYQI
Sbjct: 172 DLQQTCIPQALLGGDIICQAKSGLGKTAVFVLATLQQVEPVNGEVSVVVMCHTRELAYQI 231
Query: 131 CHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSL 188
E+ RFS Y+PDIK VFYGG IK + LKN+ CP I+VGTPGR+ AL RDK L L
Sbjct: 232 RDEYNRFSKYMPDIKTGVFYGGTPIKTDVETLKNKETCPHIIVGTPGRLKALVRDKALRL 291
Query: 189 KNVRHFILDECDKMLES----------------LDMRRDVQEIFKMTPHDKQVMMFSATL 232
+VR F+LDECDKML+ DMR DVQ++F+ TP KQVMMFSATL
Sbjct: 292 GSVRIFVLDECDKMLDQPGEHLFLHSWQQNTNQSDMRTDVQDVFRATPQQKQVMMFSATL 351
Query: 233 SKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVV 292
S+E++P+C+KFMQ+P E YVD++ KLTLHGL Q+YIKL E EKNRKLN+LLD L FNQV+
Sbjct: 352 SEEVKPICRKFMQNPTEHYVDEDTKLTLHGLQQYYIKLEEKEKNRKLNELLDDLQFNQVI 411
Query: 293 IFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGI 352
IFV+S RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE KRI VATD+ GRGI
Sbjct: 412 IFVRSTVRATELDKLLRECNFPSIAVHSGVSQEERIRRYKEFKEFKKRICVATDVFGRGI 471
Query: 353 DIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKFMFLLI 412
DIER+N+ INYD+ + A +YLHRVGRAGRFGTKGLAI+FVS+ D ++L ++ K + +
Sbjct: 472 DIERINLAINYDLSNDASSYLHRVGRAGRFGTKGLAISFVSTDQDQEVLKEIEKRFEVAL 531
Query: 413 GSF 415
F
Sbjct: 532 PEF 534
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 52/75 (69%), Gaps = 10/75 (13%)
Query: 9 YEDELLDYEEEDAQAPDSVATKANGEAA---------KKG-YVGIHSSGFRDFLLKPELL 58
+E++L+DY +E+ ++ AT +NG+ KKG YVGIHS+GFRDFLLK ELL
Sbjct: 3 HEEDLIDYSDEEIGGNETAATASNGKKGELAAGNNVDKKGSYVGIHSTGFRDFLLKAELL 62
Query: 59 RAIVDSGFEHPSEVQ 73
RAI D GFEHPSE Q
Sbjct: 63 RAIADCGFEHPSEGQ 77
>gi|321475028|gb|EFX85992.1| hypothetical protein DAPPUDRAFT_309072 [Daphnia pulex]
Length = 425
Score = 466 bits (1199), Expect = e-129, Method: Compositional matrix adjust.
Identities = 234/392 (59%), Positives = 290/392 (73%), Gaps = 4/392 (1%)
Query: 19 EDAQAPDSVATKANGEAAKKGYV---GIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHE 75
ED + + VA + G+A KG V IHSS F+D + KPE+LRAIVD GFEH SEVQ E
Sbjct: 11 EDEEVTERVAIEGIGDAPAKGKVKGISIHSSRFQDSVFKPEILRAIVDCGFEHLSEVQRE 70
Query: 76 CIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFE 135
C+PQA+LGMDV+C+AKSG GKT VFVL+TLQQ E QV LV+CH+RELA QI + +E
Sbjct: 71 CLPQAVLGMDVLCRAKSGTGKTTVFVLATLQQLETVENQVCVLVVCHSRELAIQIYNAYE 130
Query: 136 RFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFI 195
S ++ IKV VF GGVNI+ ++ LK CP IVVGTPGR+ L R K L+L+ ++HF+
Sbjct: 131 CLSKHMTTIKVGVFVGGVNIRKDEEALKTNCPHIVVGTPGRLTTLLRTKRLNLRTLKHFV 190
Query: 196 LDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYV-DD 254
LDECDKML+ M RDVQEIF TP +KQVMMFSATLSKEIRPVC+KFMQDP E+ V DD
Sbjct: 191 LDECDKMLQDTYMLRDVQEIFSNTPREKQVMMFSATLSKEIRPVCQKFMQDPTEVDVDDD 250
Query: 255 EAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFP 314
E+K TL GL QHY+KL + EKN KL +LL L+FNQVVIFV+S++R L + L E N P
Sbjct: 251 ESKHTLRGLQQHYVKLKDDEKNGKLFELLGVLEFNQVVIFVRSIARCMALCESLGEQNLP 310
Query: 315 SICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLH 374
+I IH M++ ERL+RY+ F + +RILVAT GRG+ IERVNIV NYDMP+++D YL
Sbjct: 311 AIAIHLSMTEAERLSRYQQFNDSKERILVATHWEGRGMAIERVNIVFNYDMPENSDRYLD 370
Query: 375 RVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
RV AGRFGT+GL ITFV+ D+ +LN V +
Sbjct: 371 RVAYAGRFGTQGLGITFVTDEKDAKVLNDVQE 402
>gi|326426496|gb|EGD72066.1| DEAD box polypeptide 39 isoform 1 [Salpingoeca sp. ATCC 50818]
Length = 438
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 238/408 (58%), Positives = 293/408 (71%), Gaps = 14/408 (3%)
Query: 10 EDELLDYEEEDAQAPDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEH 68
EDE+L +ED + +A KG Y G+HS+GF+DF LKPELLRAI D GFEH
Sbjct: 6 EDEVLTGYDEDVEQTTVADLEAEKPKDVKGSYSGLHSAGFKDFSLKPELLRAIRDCGFEH 65
Query: 69 PSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAY 128
PSEVQ ECIPQA++G DVICQAKSGMGKTAVFV+S L Q +P G+V+ LVLCH RELA
Sbjct: 66 PSEVQQECIPQALIGTDVICQAKSGMGKTAVFVISVLDQLKPVDGEVSCLVLCHARELAD 125
Query: 129 QICHEFERFSTYL-PDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLS 187
QI EFERF+ ++ P ++ VFYGG+ + + + L+N P +VVGTPGR+ L + L
Sbjct: 126 QIHKEFERFAAHMSPTVRSEVFYGGIKLSSNIEKLRNP-PHVVVGTPGRLYHLMEEGHLK 184
Query: 188 LKNVRHFILDECDKML-----------ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEI 236
L NV+ F++DECDK+L + LDMRR VQ + P +KQVMMF+ATL KE
Sbjct: 185 LGNVKFFVIDECDKVLKPDARSIEKGSDGLDMRRKVQALHMKCPRNKQVMMFTATLDKET 244
Query: 237 RPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVK 296
R +C+KFM +PME+ VDD+AKL L L Q+Y+KL+E EK RKL DLLDAL+FNQVVIF+
Sbjct: 245 RGLCRKFMNNPMEVCVDDDAKLKLRSLKQYYVKLTEDEKTRKLLDLLDALEFNQVVIFLS 304
Query: 297 SVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIER 356
S +R L KLL + NFP IH GM QE RL Y+ FK RILVATD+ GRG+DIER
Sbjct: 305 SQARVRVLAKLLEQENFPVKAIHGGMRQEHRLENYREFKSFKARILVATDVFGRGMDIER 364
Query: 357 VNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
VNIVINYDMP+ DTYLHRV RAGRFGTKGLAITFVS+ +++ILN+
Sbjct: 365 VNIVINYDMPEDTDTYLHRVARAGRFGTKGLAITFVSTPEEAEILNKT 412
>gi|410053369|ref|XP_001171822.3| PREDICTED: ATP-dependent RNA helicase DDX39A isoform 6 [Pan
troglodytes]
Length = 600
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 247/456 (54%), Positives = 298/456 (65%), Gaps = 68/456 (14%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDS 64
+ + E++LLDY+EE+ +T A + KG YV IHSSGFRDFLLKPELLRAIVD
Sbjct: 131 EQDVENDLLDYDEEEEPQAPQESTPAPPKKDIKGSYVSIHSSGFRDFLLKPELLRAIVDC 190
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTE-------------PN 111
GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ E P+
Sbjct: 191 GFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVGGLLPSWPH 250
Query: 112 PG---------------------QVTALVLCHTRELAYQ--------------------- 129
P + A L R+ Q
Sbjct: 251 PACGGGSRVGWMGWLTPVSPVLWEAEAAGLLEPRKSRLQCAMITPLHSSLGDRXXXXXXX 310
Query: 130 -ICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSL 188
I E+ERFS Y+P +KV+VF+GG++IK +++LK CP +VVGTPGRILAL R++ SL
Sbjct: 311 XISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNRSFSL 370
Query: 189 KNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPM 248
KNV+HF+LDECDKMLE L + P + Q + P PM
Sbjct: 371 KNVKHFVLDECDKMLEQLGESSAL-----AAPAESQCPEVIPARPSHLSPT------QPM 419
Query: 249 EIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLL 308
E++VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQV+IFVKSV R L +LL
Sbjct: 420 EVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVIIFVKSVQRCMALAQLL 479
Query: 309 VECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDS 368
VE NFP+I IH GM+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYDMP+
Sbjct: 480 VEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPED 539
Query: 369 ADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
+DTYLHRV RAGRFGTKGLAITFVS +D+ ILN V
Sbjct: 540 SDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDV 575
>gi|224156267|ref|XP_002337696.1| predicted protein [Populus trichocarpa]
gi|222869567|gb|EEF06698.1| predicted protein [Populus trichocarpa]
Length = 247
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/247 (91%), Positives = 234/247 (94%), Gaps = 1/247 (0%)
Query: 1 MGETRDNE-YEDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLR 59
MGETRDN+ YE+ELLDYEEED +APDSV K NGEA KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1 MGETRDNDAYEEELLDYEEEDDKAPDSVGAKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 60
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
+IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ EP GQV ALV
Sbjct: 61 SIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPTSGQVIALV 120
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA 179
LCHTRELAYQICHEFERFSTYLPD KVAVFYGGVN+K HKDLLKNECP +VVGTPGRILA
Sbjct: 121 LCHTRELAYQICHEFERFSTYLPDTKVAVFYGGVNVKTHKDLLKNECPHVVVGTPGRILA 180
Query: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFK+TPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQVMMFSATLSKEIRPV 240
Query: 240 CKKFMQD 246
CKKFMQD
Sbjct: 241 CKKFMQD 247
>gi|259483083|tpe|CBF78163.1| TPA: ATP-dependent RNA helicase sub2 (EC 3.6.1.-)
[Source:UniProtKB/Swiss-Prot;Acc:Q5ASK8] [Aspergillus
nidulans FGSC A4]
Length = 369
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 221/353 (62%), Positives = 271/353 (76%), Gaps = 24/353 (6%)
Query: 9 YEDELLDYEEEDAQA------------------PDSVATKANGEAAKKG-YVGIHSSGFR 49
+E++L+DY +E+ Q D T G A KKG YVGIHS+GFR
Sbjct: 3 HEEDLIDYSDEELQTTDAAATTATPAANGGQAKKDGELTVTGGRADKKGSYVGIHSTGFR 62
Query: 50 DFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTE 109
DFLLK ELLRAI D GFEHPSEVQ CIP AIL +DV+CQAKSG+GKTAVFVL+TL Q E
Sbjct: 63 DFLLKGELLRAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTLHQLE 122
Query: 110 PNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CP 167
P PG+ + LV+CHTRELAYQI +E+ RFS YLPD+K AVFYGG I+ ++L N+ P
Sbjct: 123 PVPGECSVLVMCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPIQKDIEVLSNKDTFP 182
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
I+VGTPGR+ AL RDK LSL+NV+ F+LDECDKML+ +DMRRDVQEIF+ TP DKQVMM
Sbjct: 183 NIIVGTPGRLNALVRDKKLSLRNVKAFVLDECDKMLDQIDMRRDVQEIFRATPTDKQVMM 242
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSATLS+++RP+CKKFM++P+E+YVDD+ KLTLHGL Q+YIKLSE EKNRKLN+LLD+L+
Sbjct: 243 FSATLSQDVRPICKKFMRNPLEVYVDDDTKLTLHGLQQYYIKLSEAEKNRKLNELLDSLE 302
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMS---QEERLTRYKGFKEG 337
FNQV+IFVKS RA EL+KLL ECNFPSI +HSG+S + L R +G ++
Sbjct: 303 FNQVIIFVKSTIRANELDKLLRECNFPSIAVHSGVSPGRTYQALQRVQGIQQA 355
>gi|168985559|emb|CAQ10637.1| HLA-B associated transcript 1 [Homo sapiens]
Length = 289
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 215/293 (73%), Positives = 249/293 (84%), Gaps = 14/293 (4%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPEL 57
+N+ ++ELLDYE+ D V T A G+ A K YV IHSSGFRDFLLKPEL
Sbjct: 3 ENDVDNELLDYED------DEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPEL 56
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA 117
LRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+
Sbjct: 57 LRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSV 116
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRI 177
LV+CHTRELA+QI E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRI
Sbjct: 117 LVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRI 176
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
LALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIR
Sbjct: 177 LALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR 236
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQ 290
PVC+KFMQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQ
Sbjct: 237 PVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQ 289
>gi|123449042|ref|XP_001313244.1| ATP-dependent RNA helicase p47 [Trichomonas vaginalis G3]
gi|121895120|gb|EAY00315.1| ATP-dependent RNA helicase p47, putative [Trichomonas vaginalis G3]
Length = 420
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 214/388 (55%), Positives = 281/388 (72%), Gaps = 7/388 (1%)
Query: 12 ELLDYEEEDAQAPDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHPS 70
ELL+YE++ +V + E ++G YVG+H++GFR+FLLKPEL+ AI D GFEHPS
Sbjct: 8 ELLNYEDDS-----TVDAAPHKEKEQRGHYVGVHTTGFREFLLKPELMHAISDCGFEHPS 62
Query: 71 EVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 130
+VQ ECIP A+LG D+ICQ KSGMGKTAVFV+S LQQ +P PG+V+ L + TRELA+QI
Sbjct: 63 QVQQECIPHALLGTDIICQGKSGMGKTAVFVISVLQQLDPVPGEVSCLTIAPTRELAFQI 122
Query: 131 CHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKD-LSLK 189
EF+RF+ ++P + VFYGG+ + LK + P IVV TPGR L L ++KD L +
Sbjct: 123 ATEFQRFTKFMPGVDSVVFYGGIPKATNIATLKEKKPCIVVATPGRCLDLIKEKDVLDVS 182
Query: 190 NVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPME 249
V+ F++DE DK+ E DM+ V +I+ P DKQV++FSAT+ ++ +C+ F + E
Sbjct: 183 KVKFFVIDEADKVFEKQDMKDTVDKIYNRLPKDKQVLLFSATMPDSMKEICRSFTHNATE 242
Query: 250 IYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLV 309
+YVDD+ KLTLHGL Q+Y+KL+E EKNRKL ++L+ FNQVVIF+ RA L +LL
Sbjct: 243 VYVDDDKKLTLHGLQQYYVKLAENEKNRKLVEILENYKFNQVVIFLDKKERAKNLTQLLN 302
Query: 310 ECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSA 369
EC P+I I M+QE+R+ + FK+ RILVATDL+ RGID+ERVNIVINYDMPDS
Sbjct: 303 ECGHPTIAISGNMTQEDRIRAFSEFKQFKHRILVATDLIARGIDVERVNIVINYDMPDST 362
Query: 370 DTYLHRVGRAGRFGTKGLAITFVSSASD 397
DTYLHRVGRAGRFGTKGLAI+FV + D
Sbjct: 363 DTYLHRVGRAGRFGTKGLAISFVVTEED 390
>gi|391873487|gb|EIT82517.1| ATP-dependent RNA helicase [Aspergillus oryzae 3.042]
Length = 310
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 205/289 (70%), Positives = 245/289 (84%), Gaps = 2/289 (0%)
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRI 177
+CHTRELAYQI +E+ RFS YLPD+K AVFYGG I+ ++L N+ P IVVGTPGR+
Sbjct: 1 MCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPIQKDVEVLSNKESYPNIVVGTPGRL 60
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
AL RDK LSL+NV+ F+LDECDKML+ +DMRRDVQEIF+ TP DKQVMMFSATLS+EIR
Sbjct: 61 NALVRDKKLSLRNVKAFVLDECDKMLDQIDMRRDVQEIFRATPADKQVMMFSATLSQEIR 120
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 297
PVCKKFM++P+E+YVDD+ KLTLHGL Q+YIKLSE EKNRKLN+LLD+L+FNQV+IFVKS
Sbjct: 121 PVCKKFMRNPLEVYVDDDTKLTLHGLQQYYIKLSEAEKNRKLNELLDSLEFNQVIIFVKS 180
Query: 298 VSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERV 357
RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD+ GRGIDIER+
Sbjct: 181 TLRANELDKLLRECNFPSIAVHSGVSQEERIKRYKEFKEFNKRICVATDVFGRGIDIERI 240
Query: 358 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
N+ INYD+P AD+YLHRVGRAGRFGTKGL+I+FVS+ D +L + K
Sbjct: 241 NLAINYDLPADADSYLHRVGRAGRFGTKGLSISFVSNEEDEKVLKDIEK 289
>gi|158299806|ref|XP_319825.4| AGAP009075-PA [Anopheles gambiae str. PEST]
gi|157013695|gb|EAA14744.5| AGAP009075-PA [Anopheles gambiae str. PEST]
Length = 319
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/309 (72%), Positives = 257/309 (83%)
Query: 28 ATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVI 87
T+ + K YV IHSSGFRDFLLKPE+LRAIVD GFEHPSEVQHECIPQA+LGMD++
Sbjct: 11 TTEQPKKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDIL 70
Query: 88 CQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVA 147
CQAKSGMGKTAVFVL+TLQQ EP LV+CHTRELA+QI E+ERF Y+P IKVA
Sbjct: 71 CQAKSGMGKTAVFVLATLQQLEPTENVPYVLVMCHTRELAFQISKEYERFCKYMPTIKVA 130
Query: 148 VFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLD 207
VF+GG+ I+ +++LK P I+VGTPGR+LAL R+K L+LKN++HFILDECDKMLE LD
Sbjct: 131 VFFGGLPIQKDEEVLKTTTPHIIVGTPGRVLALIRNKKLNLKNLKHFILDECDKMLEQLD 190
Query: 208 MRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHY 267
MRRDVQEIF+ TPH KQVMMFSATLSKEIRPVCKKFMQDPME+YVDDE KLTLHGL QHY
Sbjct: 191 MRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKKFMQDPMEVYVDDETKLTLHGLQQHY 250
Query: 268 IKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEER 327
+KL E EKN+KL +LLD L+FNQVVIFVKSV R L +LL E NFP+I IH GM QEER
Sbjct: 251 VKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCMALAQLLTEQNFPAIGIHRGMVQEER 310
Query: 328 LTRYKGFKE 336
L+RY+ FK+
Sbjct: 311 LSRYQQFKD 319
>gi|426387517|ref|XP_004060213.1| PREDICTED: ATP-dependent RNA helicase DDX39A isoform 2 [Gorilla
gorilla gorilla]
Length = 295
Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust.
Identities = 207/288 (71%), Positives = 245/288 (85%), Gaps = 1/288 (0%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDS 64
+ + E++LLDY+EE+ +T A + KG YV IHSSGFRDFLLKPELLRAIVD
Sbjct: 3 EQDVENDLLDYDEEEEPQAPQESTPAPPKKDIKGSYVSIHSSGFRDFLLKPELLRAIVDC 62
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQVT LV+CHTR
Sbjct: 63 GFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTR 122
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDK 184
ELA+QI E+ERFS Y+P +KV+VF+GG++IK +++LK CP +VVGTPGRILAL R++
Sbjct: 123 ELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNR 182
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 244
SLKNV+HF+LDECDKMLE LDMRRDVQEIF++TPH+KQ MMFSATLSK+IRPVC+KFM
Sbjct: 183 SFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCRKFM 242
Query: 245 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVV 292
QDPME++VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQ V
Sbjct: 243 QDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQPV 290
>gi|21619414|gb|AAH32128.1| DDX39 protein [Homo sapiens]
gi|119604823|gb|EAW84417.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 39, isoform CRA_c [Homo
sapiens]
Length = 322
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 207/288 (71%), Positives = 245/288 (85%), Gaps = 1/288 (0%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDS 64
+ + E++LLDY+EE+ +T A + KG YV IHSSGFRDFLLKPELLRAIVD
Sbjct: 3 EQDVENDLLDYDEEEEPQAPQESTPAPPKKDIKGSYVSIHSSGFRDFLLKPELLRAIVDC 62
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQVT LV+CHTR
Sbjct: 63 GFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTR 122
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDK 184
ELA+QI E+ERFS Y+P +KV+VF+GG++IK +++LK CP +VVGTPGRILAL R++
Sbjct: 123 ELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNR 182
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 244
SLKNV+HF+LDECDKMLE LDMRRDVQEIF++TPH+KQ MMFSATLSK+IRPVC+KFM
Sbjct: 183 SFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCRKFM 242
Query: 245 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVV 292
QDPME++VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQ V
Sbjct: 243 QDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQPV 290
>gi|149446031|ref|XP_001516247.1| PREDICTED: spliceosome RNA helicase DDX39B-like, partial
[Ornithorhynchus anatinus]
Length = 289
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 208/293 (70%), Positives = 243/293 (82%), Gaps = 14/293 (4%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPEL 57
+N+ ++ELLDYE+ D V T A G+ A K YV IHSSGFRDFLLKPEL
Sbjct: 3 ENDVDNELLDYED------DEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPEL 56
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA 117
LRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+
Sbjct: 57 LRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSV 116
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRI 177
LV+CHTRELA+QI E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRI
Sbjct: 117 LVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRI 176
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
LALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKE
Sbjct: 177 LALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKENP 236
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQ 290
P ++F Q PMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQ
Sbjct: 237 PXTRRFSQSPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQ 289
>gi|403302193|ref|XP_003941747.1| PREDICTED: ATP-dependent RNA helicase DDX39A isoform 2 [Saimiri
boliviensis boliviensis]
Length = 315
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 201/266 (75%), Positives = 232/266 (87%), Gaps = 1/266 (0%)
Query: 28 ATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDV 86
+T A + KG YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAILGMDV
Sbjct: 25 STPAPAKKDMKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDV 84
Query: 87 ICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKV 146
+CQAKSGMGKTAVFVL+TLQQ EP GQVT LV+CHTRELA+QI E+ERFS Y+P +KV
Sbjct: 85 LCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKV 144
Query: 147 AVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESL 206
+VF+GG++IK +++LK CP +VVGTPGRILAL R++ SLKNV+HF+LDECDKMLE L
Sbjct: 145 SVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNRSFSLKNVKHFVLDECDKMLEQL 204
Query: 207 DMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQH 266
DMRRDVQEIF++TPH+KQ MMFSATLSK+IRPVC+KFMQDPME++VDDE KLTLHGL QH
Sbjct: 205 DMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCRKFMQDPMEVFVDDETKLTLHGLQQH 264
Query: 267 YIKLSELEKNRKLNDLLDALDFNQVV 292
Y+KL + EKNRKL DLLD L+FNQ V
Sbjct: 265 YVKLRDSEKNRKLFDLLDVLEFNQPV 290
>gi|307105337|gb|EFN53587.1| hypothetical protein CHLNCDRAFT_136793 [Chlorella variabilis]
Length = 519
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 210/284 (73%), Positives = 245/284 (86%), Gaps = 2/284 (0%)
Query: 10 EDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHP 69
E+ELLDYEE D +A + A KA A KKGYVGIHSSGF+DFLLKPELLRAI D GFEHP
Sbjct: 11 EEELLDYEEADDEAQAAEAGKAAEGAVKKGYVGIHSSGFKDFLLKPELLRAIQDCGFEHP 70
Query: 70 SEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQ 129
SEVQHECIPQAILGMDVICQAKSGMGKTAVFV+STLQQ EP GQV+ +VLCHTRELA+Q
Sbjct: 71 SEVQHECIPQAILGMDVICQAKSGMGKTAVFVISTLQQLEPVDGQVSVVVLCHTRELAFQ 130
Query: 130 ICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL--KNECPQIVVGTPGRILALARDKDLS 187
ICHE+ERF+TY+ +++V F+GG+ IK ++ L K++CP ++VGTPGR+ LA +K+L
Sbjct: 131 ICHEYERFTTYMKNVRVGNFFGGLPIKQQREQLKDKDKCPHVIVGTPGRVKGLADEKNLD 190
Query: 188 LKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDP 247
+ +VRHF++DECDK LE++DMR DVQ IFK TPHDKQVMMFSATLS EIRPVCKKFM+DP
Sbjct: 191 MSHVRHFVVDECDKCLENIDMRADVQAIFKKTPHDKQVMMFSATLSSEIRPVCKKFMRDP 250
Query: 248 MEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQV 291
MEIYVDDEAKLTLHGLVQHY+ L+E +KNRKLNDLLDALDFNQ
Sbjct: 251 MEIYVDDEAKLTLHGLVQHYVMLNEDQKNRKLNDLLDALDFNQA 294
>gi|300176015|emb|CBK22232.2| unnamed protein product [Blastocystis hominis]
Length = 426
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/397 (51%), Positives = 289/397 (72%), Gaps = 6/397 (1%)
Query: 12 ELLDYEEEDAQAPDSVATKANG--EAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHP 69
+L+DY++E+ + P+ + + ++ K Y ++SS F+DF LK E+L+AI D GFEHP
Sbjct: 10 QLVDYDDEEDEIPNERPIQGDEKVDSIKAHYATMNSSSFKDFYLKDEILKAISDCGFEHP 69
Query: 70 SEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQ--QTEPNPGQVTALVLCHTRELA 127
SEVQH CIP+AI DV+CQAKSGMGKTAVFV+STLQ + +P + LV+ HTRELA
Sbjct: 70 SEVQHACIPRAITNKDVLCQAKSGMGKTAVFVISTLQMLKDDPENQDIQVLVIAHTRELA 129
Query: 128 YQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLS 187
+QI +E++RF+ ++P+++ VF+GG NI+ ++ L N P IVVGTPGR+ L + +
Sbjct: 130 FQIQNEYKRFTKFMPNVRTEVFFGGRNIQADREAL-NTHPAIVVGTPGRVEDLIKRGWMK 188
Query: 188 LKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDP 247
+ +RHF++DECD ++ S++MR +Q IF P DKQVMMF+ATL E + VC +FM+DP
Sbjct: 189 VDKLRHFVVDECDHIITSINMRAQLQSIFTACPIDKQVMMFTATLPPEAKAVCLRFMKDP 248
Query: 248 MEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKL 307
+ I +D E+ LTLHGL Q+Y+ + + +K +KL DLLD L+FNQ+VIFV++ +RA EL+ +
Sbjct: 249 LMIELD-ESALTLHGLQQYYLTIYDNQKTKKLMDLLDTLEFNQIVIFVRNSARARELSNI 307
Query: 308 LVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPD 367
L F + CI MS E+RL YK FK + RILV+T+L GRGID+++VN+VINYD P+
Sbjct: 308 LNRDQFNNTCITGDMSTEDRLEHYKRFKGFDYRILVSTNLFGRGIDVDKVNVVINYDFPE 367
Query: 368 SADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
+A+ YLHRVGRAGRFGTKGLAI+FV++ D + +V
Sbjct: 368 TANEYLHRVGRAGRFGTKGLAISFVTTEEDKKRMEEV 404
>gi|401421849|ref|XP_003875413.1| putative RNA helicase [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322491650|emb|CBZ26923.1| putative RNA helicase [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 435
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/362 (56%), Positives = 258/362 (71%), Gaps = 8/362 (2%)
Query: 41 VGIHSS----GFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGK 96
+G HS+ GF+DF LK EL AI ++GFEHPSEVQH+ +P+A+LG D++ QAKSGMGK
Sbjct: 27 MGTHSAVALGGFQDFCLKSELANAIRENGFEHPSEVQHQALPKAMLGADILAQAKSGMGK 86
Query: 97 TAVFVLSTLQQTEPNP-GQ---VTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGG 152
TAVFV + L+Q E P GQ A+VL H RELAYQI EF+RFS YLP VF+GG
Sbjct: 87 TAVFVFALLEQVEKVPQGQKPYCQAVVLVHARELAYQIEQEFKRFSKYLPYATTGVFFGG 146
Query: 153 VNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDV 212
+ + LK E P I+VGTPGR+ AL ++K V+ F++DE D+ LE + MRRDV
Sbjct: 147 IPEDENVKQLKKEVPAIIVGTPGRMKALIQNKAFDTTRVKWFVVDEFDRCLEDVKMRRDV 206
Query: 213 QEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSE 272
QEIF P +KQVMMFSAT++ E+R V KKFM+D EIYVD AKLTLHGL Q Y+ ++E
Sbjct: 207 QEIFMKLPKEKQVMMFSATMTDELRDVAKKFMKDATEIYVDQRAKLTLHGLAQFYMSVTE 266
Query: 273 LEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYK 332
EK R+L ++LD ++FNQ +IF SV R LN+ L + FPS +HS MSQEERL Y+
Sbjct: 267 SEKTRRLAEILDVVEFNQAIIFTSSVERCEALNRQLQQMKFPSQAVHSRMSQEERLRVYE 326
Query: 333 GFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFV 392
K N RI+VATDL GRG+D +R+N+V+ YDM AD+YLHRVGRAGRFGTKGL I F+
Sbjct: 327 SCKANNTRIMVATDLFGRGVDFDRINLVVQYDMASEADSYLHRVGRAGRFGTKGLTIAFI 386
Query: 393 SS 394
++
Sbjct: 387 TT 388
>gi|157869116|ref|XP_001683110.1| putative RNA helicase [Leishmania major strain Friedlin]
gi|68223993|emb|CAJ04917.1| putative RNA helicase [Leishmania major strain Friedlin]
Length = 435
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 203/362 (56%), Positives = 259/362 (71%), Gaps = 8/362 (2%)
Query: 41 VGIHSS----GFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGK 96
+G HS+ GF+DF LK EL AI ++GFEHPSEVQH+ +P+A+LG D++ QAKSGMGK
Sbjct: 27 MGTHSAVALGGFQDFCLKSELANAIRENGFEHPSEVQHQALPKAMLGADILAQAKSGMGK 86
Query: 97 TAVFVLSTLQQTEPNP-GQ---VTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGG 152
TAVFV + L+Q E P GQ A+VL H RELAYQI EF+RFS YLP VF+GG
Sbjct: 87 TAVFVFALLEQVEKVPQGQKPYCQAVVLVHARELAYQIEQEFKRFSKYLPYATTGVFFGG 146
Query: 153 VNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDV 212
+ + LK E P I+VGTPGR+ AL ++K +V+ F++DE D+ LE + MRRDV
Sbjct: 147 IPEDENVKQLKKEVPAIIVGTPGRMKALIQNKAFDTTHVKWFVVDEFDRCLEDVKMRRDV 206
Query: 213 QEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSE 272
QEIF P +KQVMMFSAT++ E+R V KKFM+D EIYVD AKLTLHGL Q Y+ ++E
Sbjct: 207 QEIFMKLPKEKQVMMFSATMTDELRDVAKKFMKDATEIYVDQRAKLTLHGLAQFYMNVTE 266
Query: 273 LEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYK 332
EK R+L ++LD ++FNQ +IF SV R LN+ L + FPS +HS MSQEERL Y+
Sbjct: 267 PEKTRRLAEILDVVEFNQAIIFTSSVERCEALNRQLQQMKFPSQAVHSRMSQEERLRVYE 326
Query: 333 GFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFV 392
K N RI+VATDL GRG+D +R+N+V+ YDM AD+YLHRVGRAGRFGTKGL I F+
Sbjct: 327 SCKANNTRIMVATDLFGRGVDFDRINLVVQYDMASEADSYLHRVGRAGRFGTKGLTIAFI 386
Query: 393 SS 394
++
Sbjct: 387 TT 388
>gi|312097317|ref|XP_003148938.1| hypothetical protein LOAG_13381 [Loa loa]
Length = 286
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 199/285 (69%), Positives = 232/285 (81%), Gaps = 5/285 (1%)
Query: 10 EDELLDYEEEDAQAPDSVATKANGEAAKK----GYVGIHSSGFRDFLLKPELLRAIVDSG 65
ED+LLDYEEE + D + NG A K Y IHSSGFRDFLLKPELLRAIVD G
Sbjct: 3 EDQLLDYEEEQEETTDGNKAE-NGSATDKKIKGTYASIHSSGFRDFLLKPELLRAIVDCG 61
Query: 66 FEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRE 125
FEHPSEVQHECIPQAILGMD++CQAKSGMGKTAVFVL+TLQQ EP G+V+ LV+CHTRE
Sbjct: 62 FEHPSEVQHECIPQAILGMDIVCQAKSGMGKTAVFVLATLQQLEPVDGEVSVLVMCHTRE 121
Query: 126 LAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKD 185
LA+QI E+ERFS Y+P +++AVF+GG+ IK ++ LKN P IVVGTPGR L LAR
Sbjct: 122 LAFQISKEYERFSKYIPGVRIAVFFGGIPIKKDEETLKNNTPHIVVGTPGRTLQLARQGS 181
Query: 186 LSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQ 245
L LKN+++F+LDECDKM+ DMRRDVQEI KMTP +KQVMMFSATL +++R VCKKFMQ
Sbjct: 182 LKLKNIKYFVLDECDKMIGDNDMRRDVQEIVKMTPQEKQVMMFSATLPRDLRVVCKKFMQ 241
Query: 246 DPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQ 290
DPME+YVDDEAKLTLHGL QHY+KL E EKN+KL +LLD L+FNQ
Sbjct: 242 DPMEVYVDDEAKLTLHGLQQHYVKLKETEKNKKLLELLDQLEFNQ 286
>gi|154337278|ref|XP_001564872.1| putative RNA helicase [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134061910|emb|CAM38950.1| putative RNA helicase [Leishmania braziliensis MHOM/BR/75/M2904]
Length = 413
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 202/362 (55%), Positives = 258/362 (71%), Gaps = 8/362 (2%)
Query: 41 VGIHSS----GFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGK 96
+G HS+ GF+DF LK EL AI ++GFEHPSEVQH+ +P+A+LG D++ QAKSGMGK
Sbjct: 5 MGTHSAVALGGFQDFCLKSELANAIRENGFEHPSEVQHQALPKAMLGADILAQAKSGMGK 64
Query: 97 TAVFVLSTLQQTEPNP-GQ---VTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGG 152
TAVFV + L+Q E P GQ A+VL H RELAYQI EF+RFS YL VF+GG
Sbjct: 65 TAVFVFALLEQVEKAPQGQKPYCQAVVLVHARELAYQIEQEFKRFSKYLSYATTGVFFGG 124
Query: 153 VNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDV 212
+ + LK E P I+VGTPGR+ AL + K V+ F++DE D+ LE + MRRDV
Sbjct: 125 IPEDENVKQLKKEVPAIIVGTPGRMKALIQAKAFDTTRVKWFVVDEFDRCLEDVKMRRDV 184
Query: 213 QEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSE 272
QEIF P +KQVMMFSAT++ E+R V KKFM+D EIYVD AKLTLHGL Q Y+ ++E
Sbjct: 185 QEIFMKLPKEKQVMMFSATMTDELRDVAKKFMKDATEIYVDQRAKLTLHGLAQFYMNVTE 244
Query: 273 LEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYK 332
+EK R+L ++LDA++FNQ +IF SV R L++ L + FPS +HS MSQEERL Y+
Sbjct: 245 VEKTRRLAEILDAVEFNQAIIFTSSVERCEALSRQLQQMKFPSQAVHSRMSQEERLRVYE 304
Query: 333 GFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFV 392
K N RI+VATDL GRG+D +R+N+V+ YDM AD+YLHRVGRAGRFGTKGL I F+
Sbjct: 305 NCKANNTRIMVATDLFGRGVDFDRINLVVQYDMASEADSYLHRVGRAGRFGTKGLTIAFI 364
Query: 393 SS 394
++
Sbjct: 365 TT 366
>gi|349804073|gb|AEQ17509.1| putative dead (asp-glu-ala-asp) box polypeptide 39 [Hymenochirus
curtipes]
Length = 352
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/401 (55%), Positives = 261/401 (65%), Gaps = 73/401 (18%)
Query: 6 DNEYEDELLDYEEED-AQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDS 64
+ + E+ELLDYEE+D QAP T A + K YV IHSSGFRDFLLKPELLRAIVD
Sbjct: 3 EQDVENELLDYEEDDEPQAPSETPTPAVRKEVKGSYVSIHSSGFRDFLLKPELLRAIVDC 62
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFEHPSEVQHECIPQAILGMD++C Q + G+ LVL +
Sbjct: 63 GFEHPSEVQHECIPQAILGMDILC------------------QAKSGMGKTAVLVLATLQ 104
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDK 184
++ V +L + +
Sbjct: 105 QIE------------------------------------------AVDGQVSVLVMCHTR 122
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 244
+L+ KNV+HF+LDECDKMLE LDMRRDVQEIF+MTPH+KQ MMFSATLSKEIRPVC+KFM
Sbjct: 123 ELNFKNVKHFVLDECDKMLEQLDMRRDVQEIFRMTPHEKQCMMFSATLSKEIRPVCRKFM 182
Query: 245 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 304
QDPME +VDDE KLTLHGL Q+Y+KL + EK L+FNQVVIFVKSV R L
Sbjct: 183 QDPME-FVDDETKLTLHGLQQYYVKLKDSEK----------LEFNQVVIFVKSVQRCMAL 231
Query: 305 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 364
+LLVE NFP+I IH M QEE+ +RY+ FK+ +RILVAT+L GRG+DIERVNIV NYD
Sbjct: 232 AQLLVEQNFPAIAIHRNM-QEEKFSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYD 290
Query: 365 MPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVS 405
MP+ +DTYLHRV RAGRFGTKGLA+TFVS D+ ILN V
Sbjct: 291 MPEDSDTYLHRVARAGRFGTKGLAVTFVSDEGDAKILNDVQ 331
>gi|119623810|gb|EAX03405.1| hCG2005638, isoform CRA_b [Homo sapiens]
Length = 320
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 196/263 (74%), Positives = 228/263 (86%)
Query: 143 DIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKM 202
D+KVAVF+GG++IK +++LK CP IVVGTPGRILALAR+K L+LK+++HFILDECDKM
Sbjct: 34 DVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKM 93
Query: 203 LESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHG 262
LE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIRPVC+KFMQDPMEI+VDDE KLTLHG
Sbjct: 94 LEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHG 153
Query: 263 LVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGM 322
L Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L +LLVE NFP+I IH GM
Sbjct: 154 LQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGM 213
Query: 323 SQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRF 382
QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNI NYDMP+ +DTYLHRV RAGRF
Sbjct: 214 PQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRF 273
Query: 383 GTKGLAITFVSSASDSDILNQVS 405
GTKGLAITFVS +D+ ILN V
Sbjct: 274 GTKGLAITFVSDENDAKILNDVQ 296
>gi|146086104|ref|XP_001465449.1| putative RNA helicase [Leishmania infantum JPCM5]
gi|398015018|ref|XP_003860699.1| RNA helicase, putative [Leishmania donovani]
gi|134069547|emb|CAM67870.1| putative RNA helicase [Leishmania infantum JPCM5]
gi|322498921|emb|CBZ33994.1| RNA helicase, putative [Leishmania donovani]
Length = 517
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/362 (56%), Positives = 259/362 (71%), Gaps = 8/362 (2%)
Query: 41 VGIHSS----GFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGK 96
+G HS+ GF+DF LK EL AI ++GFEHPSEVQH+ +P+A+LG D++ QAKSGMGK
Sbjct: 109 MGTHSAVALGGFQDFCLKSELANAIRENGFEHPSEVQHQALPKAMLGADILAQAKSGMGK 168
Query: 97 TAVFVLSTLQQTEPNP-GQ---VTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGG 152
TAVFV + L+Q E P GQ A+VL H RELAYQI EF+RFS YLP VF+GG
Sbjct: 169 TAVFVFALLEQVEKVPQGQKPYCQAVVLVHARELAYQIEQEFKRFSKYLPYATTGVFFGG 228
Query: 153 VNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDV 212
+ + LK E P I+VGTPGR+ AL ++K +V+ F++DE D+ LE + MRRDV
Sbjct: 229 IPEDENVKQLKKEVPAIIVGTPGRMKALIQNKAFDTTHVKWFVVDEFDRCLEDVKMRRDV 288
Query: 213 QEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSE 272
QEIF P +KQVMMFSAT++ E+R V KKFM+D EIYVD AKLTLHGL Q Y+ ++E
Sbjct: 289 QEIFMKLPKEKQVMMFSATMTDELRDVAKKFMKDATEIYVDQRAKLTLHGLAQFYMNVTE 348
Query: 273 LEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYK 332
EK R+L ++LD ++FNQ +IF SV R LN+ L + FPS +HS MSQEERL Y+
Sbjct: 349 PEKTRRLAEILDVVEFNQAIIFTSSVERCEALNRQLQQMKFPSQAVHSRMSQEERLRVYE 408
Query: 333 GFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFV 392
K N RI+VATDL GRG+D +R+N+V+ YDM AD+YLHRVGRAGRFGTKGL I F+
Sbjct: 409 SCKANNTRIMVATDLFGRGVDFDRINLVVQYDMASEADSYLHRVGRAGRFGTKGLTIAFI 468
Query: 393 SS 394
++
Sbjct: 469 TT 470
>gi|426352367|ref|XP_004043684.1| PREDICTED: spliceosome RNA helicase DDX39B isoform 3 [Gorilla
gorilla gorilla]
gi|119623811|gb|EAX03406.1| hCG2005638, isoform CRA_c [Homo sapiens]
gi|194389896|dbj|BAG60464.1| unnamed protein product [Homo sapiens]
Length = 350
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 195/260 (75%), Positives = 226/260 (86%)
Query: 145 KVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLE 204
KVAVF+GG++IK +++LK CP IVVGTPGRILALAR+K L+LK+++HFILDECDKMLE
Sbjct: 66 KVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLE 125
Query: 205 SLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLV 264
LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIRPVC+KFMQDPMEI+VDDE KLTLHGL
Sbjct: 126 QLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQ 185
Query: 265 QHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQ 324
Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L +LLVE NFP+I IH GM Q
Sbjct: 186 QYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQ 245
Query: 325 EERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGT 384
EERL+RY+ FK+ +RILVAT+L GRG+DIERVNI NYDMP+ +DTYLHRV RAGRFGT
Sbjct: 246 EERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGT 305
Query: 385 KGLAITFVSSASDSDILNQV 404
KGLAITFVS +D+ ILN V
Sbjct: 306 KGLAITFVSDENDAKILNDV 325
>gi|71746514|ref|XP_822312.1| ATP-dependent DEAD/H RNA helicase [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|70831980|gb|EAN77484.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
gi|261331976|emb|CBH14969.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma brucei
gambiense DAL972]
Length = 436
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/389 (53%), Positives = 267/389 (68%), Gaps = 13/389 (3%)
Query: 13 LLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSS----GFRDFLLKPELLRAIVDSGFEH 68
L D++ +D +AP A G +G HS+ GF+DF LK EL AI ++GFEH
Sbjct: 5 LADFDGDDVRAPVVAAQPHIGVG-----LGTHSAVALGGFQDFCLKSELANAIRENGFEH 59
Query: 69 PSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTE-PNPGQ---VTALVLCHTR 124
PSEVQH+ +PQA+LG D++ QAKSGMGKTAVFV + L+Q E P GQ A+V+ H R
Sbjct: 60 PSEVQHQALPQAMLGADILAQAKSGMGKTAVFVFALLEQVEKPTDGQRPFCQAIVIAHAR 119
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDK 184
ELAYQI EF+RF+ YLP VF+GGV + LK E P IVV TPGRI +L K
Sbjct: 120 ELAYQIEQEFKRFNKYLPHCTTGVFFGGVPEDENIKQLKKEVPAIVVATPGRICSLIERK 179
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 244
L + V+ F++DE D+ LE + MRRDVQ F TP +KQVMMFSAT+++E+R V KKFM
Sbjct: 180 ALDVSRVKWFVVDEFDRCLEDVKMRRDVQTAFLKTPKEKQVMMFSATMTEELRNVAKKFM 239
Query: 245 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 304
+P EIYVD +KLTLHGL Q+YI ++E +K RKL D+LDA++FNQV+IF +V R L
Sbjct: 240 SNPTEIYVDQRSKLTLHGLAQYYINVTEAQKLRKLCDILDAVEFNQVIIFTSTVERCEAL 299
Query: 305 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 364
++ L FPS IHS M Q ERL Y+ K RI+VATD+ GRG+DI+R+N+V+ +D
Sbjct: 300 SRQLQALKFPSKAIHSRMEQAERLVVYESCKTNQARIIVATDIFGRGVDIDRINLVVQFD 359
Query: 365 MPDSADTYLHRVGRAGRFGTKGLAITFVS 393
M AD+YLHRVGRAGRFGTKGL + F++
Sbjct: 360 MASDADSYLHRVGRAGRFGTKGLTVAFLT 388
>gi|342183801|emb|CCC93281.1| putative ATP-dependent DEAD/H RNA helicase [Trypanosoma congolense
IL3000]
Length = 436
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 205/389 (52%), Positives = 270/389 (69%), Gaps = 13/389 (3%)
Query: 13 LLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSS----GFRDFLLKPELLRAIVDSGFEH 68
L D++ +D +AP A G +G HS+ GF+DF LK EL AI ++GFEH
Sbjct: 5 LADFDGDDVRAPVVAAQPHIGVG-----LGTHSAVALGGFQDFCLKSELANAIRENGFEH 59
Query: 69 PSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNP-GQ---VTALVLCHTR 124
PSEVQH+ +PQA+LG D++ QAKSGMGKTAVFV + L+Q E P GQ A+V+ H R
Sbjct: 60 PSEVQHQALPQAMLGADILAQAKSGMGKTAVFVFALLEQVEKVPEGQRPYCQAIVVAHAR 119
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDK 184
ELAYQI EF+RF+ YLP VF+GG+ + LK E P IVV TPGRI +L + K
Sbjct: 120 ELAYQIEQEFKRFNKYLPHCTTGVFFGGIPEDENVKQLKKEVPAIVVATPGRICSLIQRK 179
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 244
L + V+ F++DE D+ LE + MRRDVQ F TP +KQVMMFSAT+++E+R V KKFM
Sbjct: 180 ALDVSRVKWFVIDEFDRCLEDVKMRRDVQAAFLKTPKEKQVMMFSATMTEELRAVAKKFM 239
Query: 245 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 304
+P EIYVD +KLTLHGL Q+Y+ L+E +K RKL D+LDA++FNQV+IF +V R L
Sbjct: 240 ANPTEIYVDQRSKLTLHGLAQYYMNLTEAQKLRKLCDILDAVEFNQVIIFTSTVERCEAL 299
Query: 305 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 364
++ L FP++ IHS M Q ERL Y+ K + RI+VATD+ GRG+DI+R+N+V+ +D
Sbjct: 300 SRQLQALKFPAMAIHSRMEQAERLRVYESCKTNHTRIIVATDIFGRGVDIDRINLVVQFD 359
Query: 365 MPDSADTYLHRVGRAGRFGTKGLAITFVS 393
M AD+YLHRVGRAGRFGTKGL + F++
Sbjct: 360 MASDADSYLHRVGRAGRFGTKGLTVAFLT 388
>gi|340056658|emb|CCC50994.1| putative ATP-dependent DEAD/H RNA helicase [Trypanosoma vivax Y486]
Length = 436
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/389 (52%), Positives = 270/389 (69%), Gaps = 13/389 (3%)
Query: 13 LLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSS----GFRDFLLKPELLRAIVDSGFEH 68
L D++ +D +AP A G +G HS+ GF+DF LK EL AI ++GFEH
Sbjct: 5 LADFDGDDVRAPVVTAQPHIGVG-----LGTHSAVALGGFQDFCLKSELANAIRENGFEH 59
Query: 69 PSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNP-GQ---VTALVLCHTR 124
PSEVQH+ +PQA+LG D++ QAKSGMGKTAVFV + L+Q E P GQ A+V+ H+R
Sbjct: 60 PSEVQHQALPQAMLGADILAQAKSGMGKTAVFVFALLEQVEKVPEGQKPYCQAIVIAHSR 119
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDK 184
ELAYQI EF+RF+ YLP VF+GG+ + LK E P IVV TPGRI AL + K
Sbjct: 120 ELAYQIKQEFKRFNKYLPHCTTDVFFGGIPEDENVKQLKKEVPAIVVATPGRISALIQRK 179
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 244
L + V+ F++DE D+ LE + MRRDVQ F TP +KQVMMFSAT+++E+R V KKFM
Sbjct: 180 ALDVSRVKWFVIDEFDRCLEDVKMRRDVQATFLKTPKEKQVMMFSATMTEELRTVAKKFM 239
Query: 245 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 304
+P EIYVD +KLTLHGL Q+Y+ ++E +K RKL ++LDA++FNQV+IF +V R L
Sbjct: 240 SNPTEIYVDQRSKLTLHGLAQYYMNVTEAQKVRKLCEILDAVEFNQVIIFASTVERCEAL 299
Query: 305 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 364
++ L FP++ IHS M Q RL Y+ K N RI+VATDL GRG+DI+R+N+V+ +D
Sbjct: 300 SRQLQALKFPAMAIHSRMEQSGRLRVYESCKTNNTRIIVATDLFGRGVDIDRINLVVQFD 359
Query: 365 MPDSADTYLHRVGRAGRFGTKGLAITFVS 393
M AD+YLHRVGRAGRFGTKGL + F++
Sbjct: 360 MASDADSYLHRVGRAGRFGTKGLTVAFLT 388
>gi|2739119|gb|AAB94615.1| BAT1 [Homo sapiens]
gi|340744016|dbj|BAK53243.1| HLA-B associated transcript 1 [Callithrix jacchus]
Length = 284
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 194/260 (74%), Positives = 225/260 (86%)
Query: 146 VAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLES 205
VAVF+GG++IK +++LK CP IVVGTPGRILALAR+K L+LK+++HFILDECDKMLE
Sbjct: 1 VAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQ 60
Query: 206 LDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQ 265
LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIRPVC+KFMQDPMEI+VDDE KLTLHGL Q
Sbjct: 61 LDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQ 120
Query: 266 HYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQE 325
+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L +LLVE NFP+I IH GM QE
Sbjct: 121 YYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQE 180
Query: 326 ERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTK 385
ERL+RY+ FK+ +RILVAT+L GRG+DIERVNI NYDMP+ +DTYLHRV RAGRFGTK
Sbjct: 181 ERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTK 240
Query: 386 GLAITFVSSASDSDILNQVS 405
GLAITFVS +D+ ILN V
Sbjct: 241 GLAITFVSDENDAKILNDVQ 260
>gi|441594517|ref|XP_003272140.2| PREDICTED: spliceosome RNA helicase DDX39B [Nomascus leucogenys]
Length = 362
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 194/260 (74%), Positives = 226/260 (86%)
Query: 145 KVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLE 204
+VAVF+GG++IK +++LK CP IVVGTPGRILALAR+K L+LK+++HFILDECDKMLE
Sbjct: 78 QVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLE 137
Query: 205 SLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLV 264
LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIRPVC+KFMQDPMEI+VDDE KLTLHGL
Sbjct: 138 QLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQ 197
Query: 265 QHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQ 324
Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L +LLVE NFP+I IH GM Q
Sbjct: 198 QYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQ 257
Query: 325 EERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGT 384
EERL+RY+ FK+ +RILVAT+L GRG+DIERVNI NYDMP+ +DTYLHRV RAGRFGT
Sbjct: 258 EERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGT 317
Query: 385 KGLAITFVSSASDSDILNQV 404
KGLAITFVS +D+ ILN V
Sbjct: 318 KGLAITFVSDENDAKILNDV 337
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/68 (61%), Positives = 52/68 (76%), Gaps = 2/68 (2%)
Query: 6 DNEYEDELLDYEEEDAQ-APDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVD 63
+N+ ++ELLDYE+++ + A T+A + KG YV IHSSGFRDFLLKPELLRAIVD
Sbjct: 3 ENDVDNELLDYEDDEVETAAGGDGTEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVD 62
Query: 64 SGFEHPSE 71
GFEHPSE
Sbjct: 63 CGFEHPSE 70
>gi|407406944|gb|EKF30991.1| RNA helicase, putative [Trypanosoma cruzi marinkellei]
Length = 436
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/389 (52%), Positives = 268/389 (68%), Gaps = 13/389 (3%)
Query: 13 LLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSS----GFRDFLLKPELLRAIVDSGFEH 68
L D++ +D + P A G +G HS+ GF+DF LK EL AI ++GFEH
Sbjct: 5 LADFDGDDVKVPIVSAQPHMGVG-----MGTHSAVALGGFQDFCLKSELANAIRENGFEH 59
Query: 69 PSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNP-GQ---VTALVLCHTR 124
PSEVQH+ +PQA+LG D++ QAKSGMGKTAVFV + L+Q E P GQ A+V+ H R
Sbjct: 60 PSEVQHQALPQAMLGADILAQAKSGMGKTAVFVFALLEQIEKVPEGQKPHCQAIVVVHAR 119
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDK 184
ELAYQI EF+RF+ YLP VF+GG+ + LK E P IVVGTPGR+ AL + K
Sbjct: 120 ELAYQIEQEFKRFNKYLPYCTTGVFFGGIPEDENVKQLKKEVPAIVVGTPGRLSALIQRK 179
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 244
L + V+ F++DE D+ LE + MRRDVQ +F TP +KQVMMFSAT++ E+R V KKFM
Sbjct: 180 ALDVSRVKWFVVDEFDRCLEDVKMRRDVQTVFLKTPKEKQVMMFSATMTDELRNVAKKFM 239
Query: 245 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 304
+P EIYVD AKLTLHGL Q+Y+ ++E +K RKL D+LDA++FNQ +IF SV R L
Sbjct: 240 NNPTEIYVDQRAKLTLHGLAQYYMNVTEAQKLRKLCDILDAVEFNQAIIFTSSVERCEAL 299
Query: 305 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 364
++ L FP++ IHS M Q ERL Y+ K + RI+VATDL GRG+DI+R+N+V+ +D
Sbjct: 300 SRQLQALKFPAMAIHSRMEQPERLRVYESCKSNHTRIIVATDLFGRGVDIDRINLVVQFD 359
Query: 365 MPDSADTYLHRVGRAGRFGTKGLAITFVS 393
M AD+ LHRVGRAGRFGTKGL I F++
Sbjct: 360 MASDADSCLHRVGRAGRFGTKGLTIAFLT 388
>gi|3712663|gb|AAC63046.1| DEAD-box protein [Homo sapiens]
Length = 284
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/260 (74%), Positives = 224/260 (86%)
Query: 146 VAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLES 205
VAVF+GG++IK +++LK CP IVVGTPGRILALAR+K L+LK+++HFILDECDKMLE
Sbjct: 1 VAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQ 60
Query: 206 LDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQ 265
LDMRRDVQEIF+MTP +KQVMMFSATLSKEIRPVC+KFMQDPMEI+VDDE KLTLHGL Q
Sbjct: 61 LDMRRDVQEIFRMTPXEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQ 120
Query: 266 HYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQE 325
+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L +LLVE NFP+I IH GM QE
Sbjct: 121 YYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQE 180
Query: 326 ERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTK 385
ERL+RY+ FK+ +RILVAT+L GRG+DIERVNI NYDMP+ +DTYLHRV RAGRFGTK
Sbjct: 181 ERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTK 240
Query: 386 GLAITFVSSASDSDILNQVS 405
GLAITFVS +D+ ILN V
Sbjct: 241 GLAITFVSDENDAKILNDVQ 260
>gi|428172586|gb|EKX41494.1| hypothetical protein GUITHDRAFT_88396 [Guillardia theta CCMP2712]
Length = 432
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/398 (52%), Positives = 262/398 (65%), Gaps = 4/398 (1%)
Query: 11 DELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPS 70
DE L + D+ + + + A G++ ++ FRDFLLKPELLRAI D FEHPS
Sbjct: 3 DEDLPQYDSDSDKEEEAPSARTQQTA--GHISTSAASFRDFLLKPELLRAINDCAFEHPS 60
Query: 71 EVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 130
+VQ E IP + G D++ QAK+GMGKTAVFV L++ + + ALV+ HTRELAYQ+
Sbjct: 61 KVQEEAIPDGLAGHDIVAQAKAGMGKTAVFVTVILERIAADEQSLQALVVVHTRELAYQV 120
Query: 131 CHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKN 190
EFERF YL I V YGGV + + L + P IVVG PGR+ L + K L L
Sbjct: 121 AKEFERFKAYLEGITVQCIYGGVPLPQQEASLTKDKPHIVVGCPGRLKVLVQRKALDLSR 180
Query: 191 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 250
++ F++DE DK+LE DMR+DVQEIF TP +KQ M FSATL EI+ KF+Q P EI
Sbjct: 181 LKIFVIDEVDKVLEKADMRQDVQEIFYTTPKNKQTMCFSATLPPEIKGTVMKFVQKPKEI 240
Query: 251 YVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 310
+D + KL+LHGL Q YIKL E +K RKL DL+D L+FNQVVIFV+ R LNK+L E
Sbjct: 241 LIDMD-KLSLHGLSQFYIKLEESQKTRKLTDLMDILEFNQVVIFVRDKRRCHSLNKILQE 299
Query: 311 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 370
FPSI +HS M ER+ Y FK+ RILV TDL RG+DIERVNIV NYD P AD
Sbjct: 300 SKFPSIELHSDMDATERIATYNKFKKFEARILVTTDLGARGLDIERVNIVFNYDFPIEAD 359
Query: 371 TYLHRVGRAGRFGTKGLAITFVSSASD-SDILNQVSKF 407
TY+HRVGRAGRFG KG+AI+F+S+ D S +N S F
Sbjct: 360 TYMHRVGRAGRFGNKGMAISFISTTEDPSGKINDQSIF 397
>gi|453088854|gb|EMF16894.1| P-loop containing nucleoside triphosphate hydrolase protein
[Mycosphaerella populorum SO2202]
Length = 337
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 192/315 (60%), Positives = 238/315 (75%), Gaps = 30/315 (9%)
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNEC--PQIVVGTPGRI 177
+CHTRELA+QI +E++RFS Y+P++K VFYGG +IK ++ LL N+ P I+V TPGR+
Sbjct: 1 MCHTRELAFQIKNEYQRFSKYMPEVKTEVFYGGTDIKENEKLLSNKATHPHIIVATPGRL 60
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
AL R+K L L +V F+LDECDKML+ +DMRRDVQEIF+ TP KQVMMFSATLS + +
Sbjct: 61 NALVREKKLRLGSVSRFVLDECDKMLDQIDMRRDVQEIFRATPPQKQVMMFSATLSNQTK 120
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 297
PVCKKFMQ+P+EIYVDDEAKLTLHGL Q+Y+KL+E EKNR+LNDLLD L +NQV+IFVK+
Sbjct: 121 PVCKKFMQNPLEIYVDDEAKLTLHGLQQYYVKLTEEEKNRRLNDLLDKLRYNQVIIFVKN 180
Query: 298 VSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERV 357
RA+EL++LL ECNFPSI +HS M QEER+ RY FK +KRI V+TD+ GRGIDIER+
Sbjct: 181 TLRASELDRLLRECNFPSITVHSNMPQEERIKRYTAFKNFDKRICVSTDVFGRGIDIERI 240
Query: 358 NIVINYDMPDS----------------------------ADTYLHRVGRAGRFGTKGLAI 389
N+ INYDMPDS ADTYLHRVGRAGRFGTKG+AI
Sbjct: 241 NLAINYDMPDSTSNKEAERQKTVGADKGSAEFKESVAQAADTYLHRVGRAGRFGTKGIAI 300
Query: 390 TFVSSASDSDILNQV 404
+FVSS D ++L +
Sbjct: 301 SFVSSDRDMEVLKAI 315
>gi|71411514|ref|XP_808002.1| RNA helicase [Trypanosoma cruzi strain CL Brener]
gi|70872119|gb|EAN86151.1| RNA helicase, putative [Trypanosoma cruzi]
gi|407837305|gb|EKF99724.1| RNA helicase, putative [Trypanosoma cruzi]
Length = 436
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/389 (52%), Positives = 267/389 (68%), Gaps = 13/389 (3%)
Query: 13 LLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSS----GFRDFLLKPELLRAIVDSGFEH 68
L D++ +D + P A G +G HS+ GF+DF LK EL AI ++GFEH
Sbjct: 5 LADFDGDDVKVPIVSAQPHMGVG-----MGTHSAVALGGFQDFCLKSELANAIRENGFEH 59
Query: 69 PSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNP-GQ---VTALVLCHTR 124
PSEVQH+ +PQA+LG D++ QAKSGMGKTAVFV + L+Q E P GQ +V+ H R
Sbjct: 60 PSEVQHQALPQAMLGADILAQAKSGMGKTAVFVFALLEQIEKVPEGQKPHCQGIVVVHAR 119
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDK 184
ELAYQI EF+RF+ YLP VF+GG+ + LK E P IVVGTPGR+ AL + K
Sbjct: 120 ELAYQIEQEFKRFNKYLPYCTTGVFFGGIPEDENVKQLKKEVPAIVVGTPGRLSALIQRK 179
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 244
L + V+ F++DE D+ LE + MRRDVQ +F TP +KQVMMFSAT++ E+R V KKFM
Sbjct: 180 ALDVSRVKWFVVDEFDRCLEDVKMRRDVQTVFLKTPKEKQVMMFSATMTDELRNVAKKFM 239
Query: 245 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 304
+P EIYVD AKLTLHGL Q+Y+ ++E +K RKL D+LDA++FNQ +IF SV R L
Sbjct: 240 NNPTEIYVDQRAKLTLHGLAQYYMNVTEAQKLRKLCDILDAVEFNQAIIFTSSVERCEAL 299
Query: 305 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 364
++ L FP++ IHS M Q ERL Y+ K + RI+VATDL GRG+DI+R+N+V+ +D
Sbjct: 300 SRQLQALKFPAMAIHSRMEQPERLRVYESCKSNHTRIIVATDLFGRGVDIDRINLVVQFD 359
Query: 365 MPDSADTYLHRVGRAGRFGTKGLAITFVS 393
M AD+ LHRVGRAGRFGTKGL I F++
Sbjct: 360 MASDADSCLHRVGRAGRFGTKGLTIAFLT 388
>gi|38047587|gb|AAR09696.1| similar to Drosophila melanogaster Hel25E, partial [Drosophila
yakuba]
Length = 260
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 191/260 (73%), Positives = 223/260 (85%), Gaps = 1/260 (0%)
Query: 56 ELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQV 115
E+LRAIVD GFEHPSEVQHECIPQA+LGMD++CQAKSGMGKTAVFVL+TLQQ EP+
Sbjct: 1 EILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSDNNT 60
Query: 116 T-ALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTP 174
LV+CHTRELA+QI E+ERFS Y+P +KVAVF+GG+ I+ ++ LK+ P IVVGTP
Sbjct: 61 CHVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGMAIQKDEETLKSGTPHIVVGTP 120
Query: 175 GRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSK 234
GRILAL R+K L+LK+++HF+LDECDKMLE LDMRRDVQEIF+ TPH KQVMMFSATLSK
Sbjct: 121 GRILALIRNKKLNLKHLKHFVLDECDKMLEQLDMRRDVQEIFRSTPHGKQVMMFSATLSK 180
Query: 235 EIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIF 294
+IRPVCKKFMQDPME+YVDDEAKLTLHGL QHY+ L E EKN+KL +LLD L+FNQVVIF
Sbjct: 181 DIRPVCKKFMQDPMEVYVDDEAKLTLHGLQQHYVNLKENEKNKKLFELLDVLEFNQVVIF 240
Query: 295 VKSVSRAAELNKLLVECNFP 314
VKSV R L++LL E NFP
Sbjct: 241 VKSVQRCVALSQLLTEQNFP 260
>gi|255720827|ref|XP_002545348.1| ATP-dependent RNA helicase SUB2 [Candida tropicalis MYA-3404]
gi|240135837|gb|EER35390.1| ATP-dependent RNA helicase SUB2 [Candida tropicalis MYA-3404]
Length = 290
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/277 (67%), Positives = 227/277 (81%), Gaps = 2/277 (0%)
Query: 141 LPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDE 198
+PD+K VFYGG+ IK + LKN+ CP IVV TPGR+ AL +K + L NV+ F++DE
Sbjct: 1 MPDVKTDVFYGGIPIKRDIEKLKNKDTCPHIVVATPGRLHALVEEKAIRLNNVKSFVIDE 60
Query: 199 CDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKL 258
CDK+LES+DMRRDVQ+IF+ TPH KQVMMFSATLS+EIRPVCKKFMQ+P+EIYVDDEAKL
Sbjct: 61 CDKVLESIDMRRDVQDIFRATPHQKQVMMFSATLSQEIRPVCKKFMQNPLEIYVDDEAKL 120
Query: 259 TLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICI 318
TLHGL Q+YIKL E EKNRKL+DLLD+L+FNQV+IFV+S RA ELNKLL CNFPSI +
Sbjct: 121 TLHGLQQYYIKLDEKEKNRKLSDLLDSLEFNQVIIFVRSTQRANELNKLLCACNFPSIAV 180
Query: 319 HSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGR 378
HSG+ QEER+ RYK FKE NKRI V+TD+ GRGIDIER+N+ INYD+P+ AD YLHRVGR
Sbjct: 181 HSGLPQEERIERYKSFKEFNKRICVSTDVFGRGIDIERINLAINYDLPNEADQYLHRVGR 240
Query: 379 AGRFGTKGLAITFVSSASDSDILNQVSKFMFLLIGSF 415
AGRFGTKGLAI+FVSS D ++L ++ + I F
Sbjct: 241 AGRFGTKGLAISFVSSKEDEEVLEKIQSRFDVKITDF 277
>gi|70940952|ref|XP_740824.1| helicase [Plasmodium chabaudi chabaudi]
gi|56518807|emb|CAH79054.1| helicase, putative [Plasmodium chabaudi chabaudi]
Length = 317
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 190/292 (65%), Positives = 236/292 (80%), Gaps = 1/292 (0%)
Query: 115 VTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGT 173
V L + HTRELAYQI +EF+RFS YL +++ V YGG+++ H L K N P I++GT
Sbjct: 4 VRCLGIAHTRELAYQIKNEFDRFSKYLKNVRCEVVYGGISMNKHVALFKGNNVPHIIIGT 63
Query: 174 PGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLS 233
PGRILAL R+K L ++HF+LDECDK LE LDMR DVQ+IF TP KQVM FSAT++
Sbjct: 64 PGRILALIREKYLLTDKIQHFVLDECDKCLEKLDMRGDVQKIFISTPLKKQVMFFSATMA 123
Query: 234 KEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVI 293
KE+R VCKKF+Q+P+EI++DDEAKL LHGL+QHY+KL E +K RKL ++LDAL+FNQV+I
Sbjct: 124 KEMRDVCKKFLQNPVEIFIDDEAKLKLHGLLQHYVKLQEKDKTRKLIEILDALEFNQVII 183
Query: 294 FVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGID 353
FVKSV+RA L+KLL ECNFPSI IH G++QEER+ RY FK+ RILV+TDL GRGID
Sbjct: 184 FVKSVTRAITLDKLLTECNFPSIAIHGGLNQEERIERYDKFKKFENRILVSTDLFGRGID 243
Query: 354 IERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVS 405
IER+NIVINYDMP+++D+YLHRVGRAGRFGTKGLA+TFVSS D+ LN+V
Sbjct: 244 IERINIVINYDMPENSDSYLHRVGRAGRFGTKGLAVTFVSSQEDTLALNEVQ 295
>gi|260949635|ref|XP_002619114.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238846686|gb|EEQ36150.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 290
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/270 (70%), Positives = 224/270 (82%), Gaps = 3/270 (1%)
Query: 141 LPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDE 198
+PD+K VFYGG I + LKN+ CP IVV TPGR+ AL +K + L NV+ F++DE
Sbjct: 1 MPDVKTDVFYGGTPIARDLEKLKNKDTCPHIVVATPGRLHALVAEKGIRLGNVKSFVIDE 60
Query: 199 CDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKL 258
CDK+LESLDMRRDVQ+IF+ TPH KQVMMFSATLS+EIRPVCKKFMQ P+EIYVDDEAKL
Sbjct: 61 CDKVLESLDMRRDVQDIFRNTPHQKQVMMFSATLSQEIRPVCKKFMQSPLEIYVDDEAKL 120
Query: 259 TLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICI 318
TLHGL Q+Y+KLSE EKNRKL+DLLD+L+FNQV+IFVKS RA ELNKLL CNFPSI +
Sbjct: 121 TLHGLQQYYLKLSEKEKNRKLSDLLDSLEFNQVIIFVKSTQRANELNKLLCACNFPSIAV 180
Query: 319 HSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGR 378
HSGM QEER+ RYK FKE NKRI V+TD+ GRGIDIER+N+ INYD+P AD YLHRVGR
Sbjct: 181 HSGMKQEERIARYKSFKEFNKRICVSTDVFGRGIDIERINLAINYDLPSEADQYLHRVGR 240
Query: 379 AGRFGTKGLAITFVSSASDSDILNQV-SKF 407
AGRFGTKGLAI+FVS+ D ++L ++ S+F
Sbjct: 241 AGRFGTKGLAISFVSTKEDEEVLEKIQSRF 270
>gi|68485395|ref|XP_713375.1| hypothetical protein CaO19.13092 [Candida albicans SC5314]
gi|68485490|ref|XP_713328.1| hypothetical protein CaO19.5647 [Candida albicans SC5314]
gi|46434811|gb|EAK94211.1| hypothetical protein CaO19.5647 [Candida albicans SC5314]
gi|46434859|gb|EAK94258.1| hypothetical protein CaO19.13092 [Candida albicans SC5314]
Length = 290
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/277 (67%), Positives = 226/277 (81%), Gaps = 2/277 (0%)
Query: 141 LPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDE 198
+PD+K VFYGG IK + LKN+ CP IVV TPGR+ AL +K + L NV+ F++DE
Sbjct: 1 MPDVKTDVFYGGTPIKRDIEKLKNKDTCPHIVVATPGRLHALVEEKAIRLNNVKSFVIDE 60
Query: 199 CDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKL 258
CDK+LES+DMRRDVQ+IF+ TPH KQVMMFSATLS++IRPVCKKFMQ+P+EIYVDDEAKL
Sbjct: 61 CDKVLESIDMRRDVQDIFRATPHQKQVMMFSATLSQDIRPVCKKFMQNPLEIYVDDEAKL 120
Query: 259 TLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICI 318
TLHGL Q+YIKL E EKNRKL+DLLD+L+FNQV+IFVKS RA ELNKLL CNFPSI +
Sbjct: 121 TLHGLQQYYIKLDEKEKNRKLSDLLDSLEFNQVIIFVKSTRRANELNKLLCACNFPSIAV 180
Query: 319 HSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGR 378
HSG+ QEER+ RY+ FKE NKRI V+TD+ GRGIDIER+N+ INYD+P+ AD YLHRVGR
Sbjct: 181 HSGLPQEERIERYRSFKEFNKRICVSTDVFGRGIDIERINLAINYDLPNEADQYLHRVGR 240
Query: 379 AGRFGTKGLAITFVSSASDSDILNQVSKFMFLLIGSF 415
AGRFGTKGLA++FVSS D ++L ++ + I F
Sbjct: 241 AGRFGTKGLAVSFVSSKEDEEVLEKIQSRFDVKITEF 277
>gi|260810754|ref|XP_002600114.1| hypothetical protein BRAFLDRAFT_118235 [Branchiostoma floridae]
gi|229285400|gb|EEN56126.1| hypothetical protein BRAFLDRAFT_118235 [Branchiostoma floridae]
Length = 277
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/251 (74%), Positives = 212/251 (84%)
Query: 155 IKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQE 214
I+ ++ LK CP IVV TPGR+LALARDK L+LK+V+HFILDECDKMLE LDMRRDVQE
Sbjct: 3 IQKDRNTLKTNCPHIVVATPGRLLALARDKSLNLKHVKHFILDECDKMLEQLDMRRDVQE 62
Query: 215 IFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE 274
IF+MTPH+KQVMMFSATLSKEIRPVCKKFMQDPME+YVDDE KLTLHGL QHY+KL + E
Sbjct: 63 IFRMTPHEKQVMMFSATLSKEIRPVCKKFMQDPMEVYVDDETKLTLHGLQQHYVKLKDNE 122
Query: 275 KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGF 334
KNRKL DLLD L+FNQVVIFVKSV R L +LLVE NFP+I IH M QEERL RY F
Sbjct: 123 KNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRAMGQEERLKRYNQF 182
Query: 335 KEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSS 394
K +RILVAT+L GRG+DIERVNIV NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS
Sbjct: 183 KNFERRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSD 242
Query: 395 ASDSDILNQVS 405
+D+ +LN+V
Sbjct: 243 ENDAKVLNEVQ 253
>gi|255646475|gb|ACU23716.1| unknown [Glycine max]
Length = 226
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/207 (92%), Positives = 199/207 (96%), Gaps = 1/207 (0%)
Query: 202 MLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH 261
MLESLDMR+DVQ+IFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH
Sbjct: 1 MLESLDMRKDVQDIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH 60
Query: 262 GLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSG 321
GLVQHYIKL E EKNRKLNDLLDALDFNQVVIFVKSVSRAAEL+KLLVECNFPSICIHSG
Sbjct: 61 GLVQHYIKLKEEEKNRKLNDLLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSG 120
Query: 322 MSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 381
MSQEERL RYKGFKEG+ RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR
Sbjct: 121 MSQEERLKRYKGFKEGHTRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 180
Query: 382 FGTKGLAITFVSSASDSDILNQV-SKF 407
FGTKGLAITFVS ++D D+LN V S+F
Sbjct: 181 FGTKGLAITFVSCSTDVDVLNNVQSRF 207
>gi|146182736|ref|XP_001025134.2| DEAD/DEAH box helicase family protein [Tetrahymena thermophila]
gi|146143751|gb|EAS04889.2| DEAD/DEAH box helicase family protein [Tetrahymena thermophila
SB210]
Length = 476
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/397 (50%), Positives = 264/397 (66%), Gaps = 6/397 (1%)
Query: 10 EDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHP 69
E+E+ Y+ +D +S A + A+ G HSS F DF LK +LLR++ ++GFE P
Sbjct: 5 EEEVPIYDPDDEIEANSTAPVQ--KHAQGFNTGGHSS-FNDFSLKQDLLRSVKEAGFERP 61
Query: 70 SEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQ 129
SEVQH+CIP AI G DV+CQAK+G GKTAVFVLS L Q + + LVLCHTRELA+Q
Sbjct: 62 SEVQHQCIPNAIHGKDVLCQAKAGTGKTAVFVLSVLNQLPDDAKPFSCLVLCHTRELAFQ 121
Query: 130 ICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKD--LS 187
I +EF+R + + KV YGGV + LK + P I+V TPGR L+L + K +
Sbjct: 122 IKNEFKRLGKF-TNFKVKAVYGGVEESVDIHTLKTKKPHILVATPGRCLSLIKAKPSVIE 180
Query: 188 LKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDP 247
+N+ +FI+DECD++L S MR DVQ IF P KQVMMFS T+S E + C+KF+QD
Sbjct: 181 TQNIEYFIIDECDRVLSSNKMRSDVQNIFYELPRKKQVMMFSGTMSDESKKTCRKFLQDQ 240
Query: 248 MEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKL 307
+EI+V+D +KL LHGL Q++IK+ E +K L LLD ++NQV+IFV RA L+K
Sbjct: 241 IEIFVEDNSKLVLHGLEQYHIKIEEKQKISVLRQLLDQGNYNQVIIFVNKQDRAKYLSKY 300
Query: 308 LVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPD 367
L + + I+ + Q ER Y FKEG R+LVATDLVGRGIDIERVN+VIN+DMP
Sbjct: 301 LTDKGHDNAFIYRNLDQSERTKIYSEFKEGKNRVLVATDLVGRGIDIERVNLVINFDMPQ 360
Query: 368 SADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
+ Y+HRVGRAGRF TKG AI+F+S+ D +L ++
Sbjct: 361 ITEDYMHRVGRAGRFETKGQAISFISTKEDEKVLAEI 397
>gi|340508679|gb|EGR34336.1| hypothetical protein IMG5_015740 [Ichthyophthirius multifiliis]
Length = 711
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/399 (49%), Positives = 270/399 (67%), Gaps = 5/399 (1%)
Query: 9 YEDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEH 68
+ED+ + E + + D + KA V HSS F DF LK +LLR++ ++GFE
Sbjct: 3 HEDDNDNIPEYNDDSDDELNNKAYNIQKPDQMVANHSS-FNDFNLKEDLLRSVKEAGFER 61
Query: 69 PSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAY 128
PSEVQ+ CIP AI G D++CQAK+G GKTAVFVLS L Q + + LVLCHTRELA+
Sbjct: 62 PSEVQYNCIPNAIHGTDILCQAKAGTGKTAVFVLSILNQLSDDTPPYSCLVLCHTRELAF 121
Query: 129 QICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALA--RDKDL 186
QI +EF+R Y + K +GGV+ + +LK + PQI+V TPGR L+L R+ +
Sbjct: 122 QIKNEFKRLGKYT-NFKTRAIFGGVDEQDDIAILKQKKPQILVATPGRCLSLMNMRNSVI 180
Query: 187 SLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQD 246
+KNV++F++DECD+++ES+ MR DVQEIF P KQVMMFS T++ + + +C+KFM+D
Sbjct: 181 EIKNVKYFVVDECDRVMESIKMRSDVQEIFMKLPLQKQVMMFSGTIANDSKKICRKFMKD 240
Query: 247 PMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNK 306
+EI+++D +KL LHGL Q+++KL E +K L L L FNQV+IFV V RA L+K
Sbjct: 241 QLEIFIEDNSKLVLHGLEQYHLKLEEKQKIPILIQFLTQLSFNQVIIFVNKVERAMYLSK 300
Query: 307 LLV-ECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDM 365
L + + I+ + QE+R Y+ FKEG KRILVATDL GRGIDIERVN+VIN+DM
Sbjct: 301 YLQDDKKLENSVIYRTLPQEQRTKVYQEFKEGKKRILVATDLFGRGIDIERVNLVINFDM 360
Query: 366 PDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
P+ D Y+HRVGRAGRF TKG AI+FVS+ + +L +
Sbjct: 361 PEKQDDYMHRVGRAGRFETKGTAISFVSTKENEQVLKDI 399
>gi|403307907|ref|XP_003944424.1| PREDICTED: LOW QUALITY PROTEIN: spliceosome RNA helicase DDX39B
[Saimiri boliviensis boliviensis]
Length = 577
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/249 (73%), Positives = 211/249 (84%), Gaps = 14/249 (5%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPEL 57
+N+ ++ELLDYE+ D V T A G+ A K YV IHSSGFRDFLLKPEL
Sbjct: 3 ENDVDNELLDYED------DEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPEL 56
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA 117
LRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+
Sbjct: 57 LRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSV 116
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRI 177
LV+CHTRELA+QI E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRI
Sbjct: 117 LVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRI 176
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
LALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIR
Sbjct: 177 LALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR 236
Query: 238 PVCKKFMQD 246
PVC+KFMQD
Sbjct: 237 PVCRKFMQD 245
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/115 (70%), Positives = 94/115 (81%)
Query: 290 QVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVG 349
+VVIFVKSV R L +LLVE NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L G
Sbjct: 438 EVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFG 497
Query: 350 RGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
RG+DIERVNI NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN V
Sbjct: 498 RGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDV 552
>gi|74142931|dbj|BAE42496.1| unnamed protein product [Mus musculus]
Length = 324
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/243 (74%), Positives = 214/243 (88%), Gaps = 2/243 (0%)
Query: 6 DNEYEDELLDYEEEDAQ-APDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVD 63
+N+ ++ELLDYE+++ + A + T+A + KG YV IHSSGFRDFLLKPELLRAIVD
Sbjct: 3 ENDVDNELLDYEDDEVETAAGADGTEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVD 62
Query: 64 SGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHT 123
GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHT
Sbjct: 63 CGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHT 122
Query: 124 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARD 183
RELA+QI E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRILALAR+
Sbjct: 123 RELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARN 182
Query: 184 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF 243
K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIRPVC+KF
Sbjct: 183 KSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKF 242
Query: 244 MQD 246
MQD
Sbjct: 243 MQD 245
>gi|119623817|gb|EAX03412.1| hCG2005638, isoform CRA_d [Homo sapiens]
Length = 290
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/249 (73%), Positives = 211/249 (84%), Gaps = 14/249 (5%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPEL 57
+N+ ++ELLDYE+ D V T A G+ A K YV IHSSGFRDFLLKPEL
Sbjct: 3 ENDVDNELLDYED------DEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPEL 56
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA 117
LRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+
Sbjct: 57 LRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSV 116
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRI 177
LV+CHTRELA+QI E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRI
Sbjct: 117 LVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRI 176
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
LALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIR
Sbjct: 177 LALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR 236
Query: 238 PVCKKFMQD 246
PVC+KFMQD
Sbjct: 237 PVCRKFMQD 245
>gi|344239195|gb|EGV95298.1| Spliceosome RNA helicase BAT1 [Cricetulus griseus]
Length = 288
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/243 (74%), Positives = 213/243 (87%), Gaps = 2/243 (0%)
Query: 6 DNEYEDELLDYEEEDAQ-APDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVD 63
+N+ ++ELLDYE+++ + A T+A + KG YV IHSSGFRDFLLKPELLRAIVD
Sbjct: 3 ENDVDNELLDYEDDEVETAAGGDGTEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVD 62
Query: 64 SGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHT 123
GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHT
Sbjct: 63 CGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPITGQVSVLVMCHT 122
Query: 124 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARD 183
RELA+QI E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRILALAR+
Sbjct: 123 RELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARN 182
Query: 184 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF 243
K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIRPVC+KF
Sbjct: 183 KSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKF 242
Query: 244 MQD 246
MQD
Sbjct: 243 MQD 245
>gi|355671587|gb|AER94941.1| HLA-B associated transcript 1 [Mustela putorius furo]
Length = 244
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/248 (73%), Positives = 210/248 (84%), Gaps = 14/248 (5%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPEL 57
+N+ ++ELLDYEE D V T A G+ A K YV IHSSGFRDFLLKPEL
Sbjct: 3 ENDVDNELLDYEE------DEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPEL 56
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA 117
LRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+
Sbjct: 57 LRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSV 116
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRI 177
LV+CHTRELA+QI E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRI
Sbjct: 117 LVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRI 176
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
LALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIR
Sbjct: 177 LALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR 236
Query: 238 PVCKKFMQ 245
PVC+KFMQ
Sbjct: 237 PVCRKFMQ 244
>gi|62088014|dbj|BAD92454.1| HLA-B associated transcript 1 variant [Homo sapiens]
Length = 310
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/249 (73%), Positives = 211/249 (84%), Gaps = 14/249 (5%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPEL 57
+N+ ++ELLDYE+ D V T A G+ A K YV IHSSGFRDFLLKPEL
Sbjct: 23 ENDVDNELLDYED------DEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPEL 76
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA 117
LRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+
Sbjct: 77 LRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSV 136
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRI 177
LV+CHTRELA+QI E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRI
Sbjct: 137 LVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRI 196
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
LALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIR
Sbjct: 197 LALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR 256
Query: 238 PVCKKFMQD 246
PVC+KFMQD
Sbjct: 257 PVCRKFMQD 265
>gi|52695645|pdb|1T6N|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human Uap56
gi|52695646|pdb|1T6N|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human Uap56
Length = 220
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/220 (79%), Positives = 199/220 (90%)
Query: 33 GEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKS 92
G K YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKS
Sbjct: 1 GSDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKS 60
Query: 93 GMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGG 152
GMGKTAVFVL+TLQQ EP GQV+ LV+CHTRELA+QI E+ERFS Y+P++KVAVF+GG
Sbjct: 61 GMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGG 120
Query: 153 VNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDV 212
++IK +++LK CP IVVGTPGRILALAR+K L+LK+++HFILDECDKMLE LDMRRDV
Sbjct: 121 LSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDV 180
Query: 213 QEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYV 252
QEIF+MTPH+KQVMMFSATLSKEIRPVC+KFMQDPMEI+V
Sbjct: 181 QEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFV 220
>gi|354492854|ref|XP_003508559.1| PREDICTED: spliceosome RNA helicase Ddx39b-like [Cricetulus
griseus]
Length = 376
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/252 (72%), Positives = 211/252 (83%), Gaps = 14/252 (5%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPEL 57
+N+ ++ELLDYE+ D V T A G+ K YV IHSSGFRDFLLKPEL
Sbjct: 3 ENDVDNELLDYED------DEVETAAGGDGTEAPAKKDVKGSYVSIHSSGFRDFLLKPEL 56
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA 117
LRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+
Sbjct: 57 LRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPITGQVSV 116
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRI 177
LV+CHTRELA+QI E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRI
Sbjct: 117 LVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRI 176
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
LALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIR
Sbjct: 177 LALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR 236
Query: 238 PVCKKFMQDPME 249
PVC+KFMQD E
Sbjct: 237 PVCRKFMQDHQE 248
>gi|300123033|emb|CBK24040.2| unnamed protein product [Blastocystis hominis]
Length = 1030
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/379 (48%), Positives = 258/379 (68%), Gaps = 13/379 (3%)
Query: 40 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 99
Y G+ SGF+ F LK E+++AI + GFEHPSEVQ +CIP+A++ D++CQA+SGMGKT V
Sbjct: 636 YAGVGGSGFQSFFLKEEIMKAISECGFEHPSEVQSQCIPKALMRGDILCQARSGMGKTCV 695
Query: 100 FVLSTLQQTE--------PNPG--QVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVF 149
FV+S LQ + P+ Q T +V HTRE+A QI EF R YLPDI +
Sbjct: 696 FVISVLQNIKHSDHVRFFPSDAHTQTTCVVFSHTREMAIQITREFIRLGKYLPDIVIKTV 755
Query: 150 YGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMR 209
+GGV ++ +K+ C I+VGT GRI L R K L ++ F++DECD+ +E+L R
Sbjct: 756 FGGVPLRKSMADIKSGC-DILVGTAGRIADLVRHKALDTSQLKFFVVDECDRQIETLSTR 814
Query: 210 RDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIK 269
D+QE+F+ P DKQV+MF+ATLS+ + C K+M+ P+ I +DD+ KLTLHGL Q + +
Sbjct: 815 ADIQEVFRSAPLDKQVLMFTATLSENAKASCLKYMRSPLCIEIDDK-KLTLHGLTQFFTR 873
Query: 270 LSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLT 329
++E +KNR+L + LD DFNQ VI+V S +RA L KL+ E FP I + + M EER+
Sbjct: 874 VTEGQKNRRLTEFLDNSDFNQAVIYVSSNARARALQKLMTEWCFPCIALTANMPVEERMR 933
Query: 330 RYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAI 389
+ FKE RIL+ T ++GRG+D+E+VN+V+NYD P S++ YLHRVGRAGRFGT G+ +
Sbjct: 934 HFIQFKEVKTRILITTQVMGRGVDVEKVNMVVNYDFPPSSNDYLHRVGRAGRFGTNGVTM 993
Query: 390 TFVSSASDSDILNQV-SKF 407
+FVSS D +L +V S+F
Sbjct: 994 SFVSSEEDEKVLAEVESRF 1012
>gi|444317196|ref|XP_004179255.1| hypothetical protein TBLA_0B09205 [Tetrapisispora blattae CBS 6284]
gi|387512295|emb|CCH59736.1| hypothetical protein TBLA_0B09205 [Tetrapisispora blattae CBS 6284]
Length = 453
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/362 (48%), Positives = 253/362 (69%), Gaps = 2/362 (0%)
Query: 47 GFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQ 106
F+DF+LKP L++A++D FEHPSEVQ + +PQA++G D++CQ KSG GKTA+F+LSTLQ
Sbjct: 74 SFKDFMLKPVLIKALMDIEFEHPSEVQQQALPQALIGRDILCQGKSGSGKTAIFILSTLQ 133
Query: 107 QTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE- 165
G+V+ VLCH+RELAYQ+ E+++FS Y+ D+ GG +IK + KN+
Sbjct: 134 NINLIRGEVSCAVLCHSRELAYQVNEEYKKFSKYMVDLITVASIGGTSIKNDGGVFKNKK 193
Query: 166 -CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQ 224
CP IVV TPGR+L L ++K + ++ ++DECDK+L MR E+FK+T ++KQ
Sbjct: 194 KCPNIVVTTPGRLLVLVKNKIVDPTQLKTIVIDECDKVLSEEKMRNAFDEVFKLTLNEKQ 253
Query: 225 VMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLD 284
+MMFSATLS E + +C+K+ Q+P++IY+ +E KL L L Q++ K+ E K +KL ++LD
Sbjct: 254 MMMFSATLSNEAKEICQKYTQNPLQIYIANEKKLILPRLKQYFFKVEEKRKTQKLTEILD 313
Query: 285 ALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVA 344
++FNQV+IFVKS A L +L E NF +I I+ RL YK FKE +ILV
Sbjct: 314 DVNFNQVIIFVKSPKNAKLLATILNELNFTAITINGYTKTNLRLQNYKDFKENEVKILVT 373
Query: 345 TDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
TD+ GRG+D +RVN+ INYD+P S DT+LHRVGR GRFG+KGLAI+F+S+ D +++ +
Sbjct: 374 TDMFGRGLDFKRVNLAINYDLPISIDTFLHRVGRTGRFGSKGLAISFISNKKDEEMIENI 433
Query: 405 SK 406
+
Sbjct: 434 QQ 435
>gi|397526359|ref|XP_003833095.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
DDX39A-like [Pan paniscus]
Length = 482
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/400 (51%), Positives = 262/400 (65%), Gaps = 24/400 (6%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSG 65
+ + E+ELLDYEEE +P S + K YV +HSSGF DFLLK EL
Sbjct: 3 EQDVENELLDYEEEPQASPGSTLVPRKKDV-KGSYVSVHSSGFWDFLLKLEL-------- 53
Query: 66 FEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRE 125
EVQHECI QA LGMD+ CQAKSG GKTAVFV +T+QQ P QVT L+ CHT E
Sbjct: 54 ----XEVQHECILQATLGMDIQCQAKSGKGKTAVFVPATVQQIRPVNXQVTVLIXCHTGE 109
Query: 126 LAYQICHEF-ERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDK 184
LA+QI E E FS +P +KV+VF+GG+ IK +++LL N CP+++VGTPGRI+AL +++
Sbjct: 110 LAFQISKECNEHFSKXMPSVKVSVFFGGLFIKKNEELLMN-CPRVMVGTPGRIVALVQNR 168
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 244
L+LKNV+HF+LDE ML LDM RD+ E + KQ +MFSATLSKEI PVC++ M
Sbjct: 169 SLNLKNVKHFVLDE---MLRWLDMWRDMWEASHLMFQQKQXIMFSATLSKEIWPVCRESM 225
Query: 245 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 304
Q PME++VDDE K TLH Q+Y+KL + EKN KL DLLD L+F QV IF+K V
Sbjct: 226 QGPMEVFVDDETKRTLHTPQQYYLKLKDTEKNCKLFDLLDMLEFKQVAIFIKPVQPCMSP 285
Query: 305 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 364
+LL+E NF M+QEE L+RY K+ + ILV +L +I R NY
Sbjct: 286 AQLLMEQNF------LAMAQEECLSRYXQSKDFQQWILVDINLFAVSCNIHRDMEAFNYG 339
Query: 365 MPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
MP+ +DTYLH V AG FGTK LAITFVS +D+ +LN +
Sbjct: 340 MPEDSDTYLHPVACAGCFGTKDLAITFVSEENDAKVLNDI 379
>gi|430811988|emb|CCJ30584.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 770
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/329 (59%), Positives = 230/329 (69%), Gaps = 51/329 (15%)
Query: 11 DELLDYEEEDAQAPDSVATKA--------NGEAA--KKG-YVGIHSSGFRDFLLKPELLR 59
D+L+DYEEE+ + P S NGE KKG YVGIHS+GFRDFLLKPELLR
Sbjct: 480 DDLIDYEEEE-ELPASAGVSTVMGTGGTVNGEKKNEKKGSYVGIHSTGFRDFLLKPELLR 538
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
AI+D VQ CIPQ+ILGMD+ICQAKSGMGKTAVFVL+TLQQ EP G+V+ LV
Sbjct: 539 AIIDC-------VQQVCIPQSILGMDIICQAKSGMGKTAVFVLATLQQIEPVDGEVSVLV 591
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKN--ECPQIVVGTPGRI 177
CHTRELA+QI +E+ RFS Y+PD++ AVFYGG ++ +LLKN +CP I+V TPGR+
Sbjct: 592 QCHTRELAFQIKNEYARFSKYMPDVRTAVFYGGTPVRNDIELLKNKEKCPHIIVATPGRL 651
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
AL RDK L V+HFILDE MRRD+QE+F+ TPH KQ
Sbjct: 652 NALVRDKALRAGCVKHFILDEY--------MRRDIQEVFRATPHQKQ------------- 690
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 297
P+EIYVDDE KLTLHGL QHY+KL E KNRKLNDLLDAL+FNQVVIFVKS
Sbjct: 691 ---------PLEIYVDDETKLTLHGLQQHYVKLEESAKNRKLNDLLDALEFNQVVIFVKS 741
Query: 298 VSRAAELNKLLVECNFPSICIHSGMSQEE 326
V RA+EL++LL ECNFPSICIH + QEE
Sbjct: 742 VQRASELDRLLRECNFPSICIHGALPQEE 770
>gi|68161088|gb|AAY86975.1| DEAD box protein [Ictalurus punctatus]
Length = 251
Score = 370 bits (949), Expect = e-99, Method: Compositional matrix adjust.
Identities = 174/233 (74%), Positives = 202/233 (86%)
Query: 173 TPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATL 232
TPGRILAL R+K LSLKNV+HF+LDECDKMLE LDMRRDVQ+IF++TPH+KQ MMFSATL
Sbjct: 1 TPGRILALVRNKTLSLKNVKHFVLDECDKMLEQLDMRRDVQDIFRLTPHEKQCMMFSATL 60
Query: 233 SKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVV 292
SKEIRPVC+KFMQDPME++VDDE KLTLHGL Q+Y KL + EKNRKL DLLD L+FNQVV
Sbjct: 61 SKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVV 120
Query: 293 IFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGI 352
IFVK V+R L++LLVE NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+
Sbjct: 121 IFVKPVARCVALSQLLVEQNFPAIAIHRGMVQEERLSRYQQFKDFQRRILVATNLFGRGM 180
Query: 353 DIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVS 405
DIERVNIV NYDMP+ +DTYLHRV RAGRFGTKGLA+TFVS +D+ ILN V
Sbjct: 181 DIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDETDAKILNDVQ 233
>gi|171702402|dbj|BAG16272.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 transcript variant [Homo
sapiens]
Length = 267
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 174/242 (71%), Positives = 206/242 (85%), Gaps = 1/242 (0%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDS 64
+ + E++LLDY+EE+ +T A + KG YV IHSSGFRDFLLKPELLRAIVD
Sbjct: 3 EQDVENDLLDYDEEEEPQAPQESTPAPPKKDIKGSYVSIHSSGFRDFLLKPELLRAIVDC 62
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQVT LV+CHTR
Sbjct: 63 GFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTR 122
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDK 184
ELA+QI E+ERFS Y+P +KV+VF+GG++IK +++LK CP +VVGTPGRILAL R++
Sbjct: 123 ELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNR 182
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 244
SLKNV+HF+LDECDKMLE LDMRRDVQEIF++TPH+KQ MMFSATLSK+IRPVC+KFM
Sbjct: 183 SFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCRKFM 242
Query: 245 QD 246
QD
Sbjct: 243 QD 244
>gi|119604821|gb|EAW84415.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 39, isoform CRA_b [Homo
sapiens]
gi|119604822|gb|EAW84416.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 39, isoform CRA_b [Homo
sapiens]
Length = 316
Score = 364 bits (935), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 174/242 (71%), Positives = 206/242 (85%), Gaps = 1/242 (0%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDS 64
+ + E++LLDY+EE+ +T A + KG YV IHSSGFRDFLLKPELLRAIVD
Sbjct: 3 EQDVENDLLDYDEEEEPQAPQESTPAPPKKDIKGSYVSIHSSGFRDFLLKPELLRAIVDC 62
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQVT LV+CHTR
Sbjct: 63 GFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTR 122
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDK 184
ELA+QI E+ERFS Y+P +KV+VF+GG++IK +++LK CP +VVGTPGRILAL R++
Sbjct: 123 ELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNR 182
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 244
SLKNV+HF+LDECDKMLE LDMRRDVQEIF++TPH+KQ MMFSATLSK+IRPVC+KFM
Sbjct: 183 SFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCRKFM 242
Query: 245 QD 246
QD
Sbjct: 243 QD 244
>gi|432097471|gb|ELK27668.1| ATP-dependent RNA helicase DDX39A [Myotis davidii]
Length = 336
Score = 364 bits (935), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 171/249 (68%), Positives = 209/249 (83%)
Query: 156 KIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEI 215
K +++LK CP +VVGTPGR+LAL R++ L+L+NV+HF+LDECD+MLE LDMR DVQEI
Sbjct: 63 KKDEEVLKKSCPHVVVGTPGRLLALVRNRSLNLRNVKHFVLDECDQMLEQLDMRWDVQEI 122
Query: 216 FKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEK 275
F++TP KQ MMFSATLSKEIRPVC+KFMQ+P+E+ VDD+ KLTLHGL Q+Y+KL E EK
Sbjct: 123 FRLTPRGKQCMMFSATLSKEIRPVCRKFMQEPLEVAVDDDTKLTLHGLQQYYVKLREREK 182
Query: 276 NRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFK 335
NRKL DLLD L+FNQVVIFV+SV R L +LL E +FP+I IH M+QEERL+RY+ FK
Sbjct: 183 NRKLVDLLDVLEFNQVVIFVRSVQRCMALAQLLGEQSFPAIAIHRAMAQEERLSRYQQFK 242
Query: 336 EGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSA 395
+ +RILVAT+L GRG+DIERVNIV NYDM + +DTYLHRV RAGRFGTKGLAITFVS
Sbjct: 243 DFQQRILVATNLFGRGMDIERVNIVFNYDMAEDSDTYLHRVARAGRFGTKGLAITFVSHD 302
Query: 396 SDSDILNQV 404
+D+ ILN+V
Sbjct: 303 NDAKILNEV 311
>gi|168985562|emb|CAQ10640.1| HLA-B associated transcript 1 [Homo sapiens]
Length = 238
Score = 364 bits (935), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 176/242 (72%), Positives = 204/242 (84%), Gaps = 14/242 (5%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPEL 57
+N+ ++ELLDYE+ D V T A G+ A K YV IHSSGFRDFLLKPEL
Sbjct: 3 ENDVDNELLDYED------DEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPEL 56
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA 117
LRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+
Sbjct: 57 LRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSV 116
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRI 177
LV+CHTRELA+QI E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRI
Sbjct: 117 LVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRI 176
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
LALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIR
Sbjct: 177 LALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR 236
Query: 238 PV 239
PV
Sbjct: 237 PV 238
>gi|168985561|emb|CAQ10639.1| HLA-B associated transcript 1 [Homo sapiens]
Length = 236
Score = 360 bits (924), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 174/240 (72%), Positives = 202/240 (84%), Gaps = 14/240 (5%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPEL 57
+N+ ++ELLDYE+ D V T A G+ A K YV IHSSGFRDFLLKPEL
Sbjct: 3 ENDVDNELLDYED------DEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPEL 56
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA 117
LRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+
Sbjct: 57 LRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSV 116
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRI 177
LV+CHTRELA+QI E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRI
Sbjct: 117 LVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRI 176
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
LALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIR
Sbjct: 177 LALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR 236
>gi|67480889|ref|XP_655794.1| helicase [Entamoeba histolytica HM-1:IMSS]
gi|56472953|gb|EAL50406.1| helicase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449708168|gb|EMD47681.1| spliceosome RNA helicase Bat1, putative [Entamoeba histolytica
KU27]
Length = 419
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 186/396 (46%), Positives = 263/396 (66%), Gaps = 13/396 (3%)
Query: 22 QAPDSVAT---KANGEAAKK-GYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECI 77
Q PD V T K + E A K YVG + F + LK E+L AI D GFEHPSEVQ + I
Sbjct: 7 QIPDYVPTTETKMDIEPANKDNYVG--TVAFSNMNLKKEILMAITDCGFEHPSEVQSQVI 64
Query: 78 PQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERF 137
P+A+L D++CQAKSGMGKTAVFV+S L Q V+ALV+CHTRELA Q+ EF+R
Sbjct: 65 PKALLKQDILCQAKSGMGKTAVFVISILNQGLCLGDYVSALVICHTRELAVQVQKEFDRM 124
Query: 138 STYL-----PDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVR 192
L +I F GG + K + +K P IV+GTPGRI +L R L+L +
Sbjct: 125 KKRLCEATGKEITTGTFVGGFDEKKDVEFIKTNKPTIVIGTPGRIASLVRQGALNLSKLD 184
Query: 193 HFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYV 252
F++DECDK+L S + D+ EIF TP +KQVMMFSAT+S+E + +C+K++++ +E+++
Sbjct: 185 TFVIDECDKVLGSAN-EIDIGEIFISTPKEKQVMMFSATISEENKTICRKYLKNQLEVFI 243
Query: 253 DDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECN 312
DD KL LHGL ++ KL + +K + D++D +DFNQ ++FV++ R L K L +
Sbjct: 244 DDGEKLFLHGLHLYFKKLGDNDKRKTFMDIIDYIDFNQAIVFVENSDRCRVLVKKLKQIG 303
Query: 313 FPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTY 372
+P ++ M QE R Y+ F++G R+LV+TDL GRGID+ +VN+V+N+DMP+ +D +
Sbjct: 304 YPCGILYGRMDQEIREKEYQRFRDGESRVLVSTDLCGRGIDVAKVNLVVNFDMPNDSDQF 363
Query: 373 LHRVGRAGRFGTKGLAITFVSSASDSDILNQV-SKF 407
LHRVGRAGRFGTKG+AI+F+ + D +L +V S+F
Sbjct: 364 LHRVGRAGRFGTKGVAISFIDTDEDEKVLKEVQSRF 399
>gi|407038866|gb|EKE39347.1| DEAD/DEAH box helicase, putative [Entamoeba nuttalli P19]
Length = 419
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 186/396 (46%), Positives = 263/396 (66%), Gaps = 13/396 (3%)
Query: 22 QAPDSVAT---KANGEAAKK-GYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECI 77
Q PD V T K + E A K YVG + F + LK E+L AI D GFEHPSEVQ + I
Sbjct: 7 QIPDYVPTTETKMDIEPANKDNYVG--TVAFSNMNLKKEILMAITDCGFEHPSEVQSQVI 64
Query: 78 PQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERF 137
P+A+L D++CQAKSGMGKTAVFV+S L Q V+ALV+CHTRELA Q+ EF+R
Sbjct: 65 PKALLKQDILCQAKSGMGKTAVFVISILNQGLCLGDYVSALVICHTRELAVQVQKEFDRM 124
Query: 138 STYL-----PDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVR 192
L +I F GG + K + +K P IV+GTPGRI +L R L+L +
Sbjct: 125 KKRLCEATGKEIPTGTFVGGFDEKKDVEFIKTNKPTIVIGTPGRIASLVRQGALNLNKLD 184
Query: 193 HFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYV 252
F++DECDK+L S + D+ EIF TP +KQVMMFSAT+S+E + +C+K++++ +E+++
Sbjct: 185 TFVIDECDKVLGSAN-EIDIGEIFISTPKEKQVMMFSATISEENKTICRKYLKNQLEVFI 243
Query: 253 DDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECN 312
DD KL LHGL ++ KL + +K + D++D +DFNQ ++FV++ R L K L +
Sbjct: 244 DDGEKLFLHGLHLYFKKLGDNDKRKTFMDIIDYIDFNQAIVFVENSDRCRVLVKKLKQIG 303
Query: 313 FPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTY 372
+P ++ M QE R Y+ F++G R+LV+TDL GRGID+ +VN+V+N+DMP+ +D +
Sbjct: 304 YPCGILYGRMDQEIREKEYQRFRDGESRVLVSTDLCGRGIDVAKVNLVVNFDMPNDSDQF 363
Query: 373 LHRVGRAGRFGTKGLAITFVSSASDSDILNQV-SKF 407
LHRVGRAGRFGTKG+AI+F+ + D +L +V S+F
Sbjct: 364 LHRVGRAGRFGTKGVAISFIDTDEDEKVLKEVQSRF 399
>gi|168985560|emb|CAQ10638.1| HLA-B associated transcript 1 [Homo sapiens]
Length = 231
Score = 350 bits (899), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 169/235 (71%), Positives = 197/235 (83%), Gaps = 14/235 (5%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPEL 57
+N+ ++ELLDYE+ D V T A G+ A K YV IHSSGFRDFLLKPEL
Sbjct: 3 ENDVDNELLDYED------DEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPEL 56
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA 117
LRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+
Sbjct: 57 LRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSV 116
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRI 177
LV+CHTRELA+QI E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRI
Sbjct: 117 LVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRI 176
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATL 232
LALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATL
Sbjct: 177 LALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATL 231
>gi|300707962|ref|XP_002996171.1| hypothetical protein NCER_100776 [Nosema ceranae BRL01]
gi|239605448|gb|EEQ82500.1| hypothetical protein NCER_100776 [Nosema ceranae BRL01]
Length = 397
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 178/399 (44%), Positives = 259/399 (64%), Gaps = 13/399 (3%)
Query: 10 EDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHP 69
+DEL+DY E D Q TK S+ F+DFLL+ EL+ +I D+ FEHP
Sbjct: 3 DDELIDYRE-DLQTVKKSQTKLKS-----------SAQFKDFLLRDELMESIKDAAFEHP 50
Query: 70 SEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQ 129
SEVQ IP+AILG D++CQAKSG GKTAVFVLSTLQQ + + +V+ HT+E+A Q
Sbjct: 51 SEVQQMAIPKAILGQDLLCQAKSGTGKTAVFVLSTLQQLKVVDKETVIIVMVHTKEMAEQ 110
Query: 130 ICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLK 189
+ E+ RFS + ++ V YGG +I+ LL P +++GTPGR+ + + + L+LK
Sbjct: 111 VKQEYLRFSKKMDNVSVGAVYGGNDIEEDIKLLGTCSPSVLIGTPGRLAEIVKRRALNLK 170
Query: 190 NVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPME 249
+V+ F++DECDKM+ +DMR D QE+F TP +KQ +MF+ATL+K C +F+ +P
Sbjct: 171 HVKFFVMDECDKMIGDIDMRCDTQEVFINTPRNKQTLMFTATLNKYTTDECLRFLDNPFI 230
Query: 250 IYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLV 309
+ VDDE+KLTL+GL Q Y+++ + K KL +L++ +NQ +IF + ++ L
Sbjct: 231 VRVDDESKLTLYGLKQSYVEVEQSNKLNKLVSVLNSTTYNQAMIFTAAKLLPTKICNFLK 290
Query: 310 ECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSA 369
E + +H+G+ +ER R FK+ RI+V TDL+ RGID++ VN VIN+DMPDS
Sbjct: 291 EKGLVAGDLHAGLKSDERKERLLSFKKYEYRIMVTTDLMSRGIDVQDVNFVINFDMPDSP 350
Query: 370 DTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV-SKF 407
+TYLHRVGRAGRF T+G A++F+ + D LN++ S+F
Sbjct: 351 ETYLHRVGRAGRFETEGQAVSFICNEEDRIKLNEIQSRF 389
>gi|167387857|ref|XP_001738337.1| spliceosome RNA helicase Bat1 [Entamoeba dispar SAW760]
gi|167394345|ref|XP_001740939.1| spliceosome RNA helicase Bat1 [Entamoeba dispar SAW760]
gi|165894738|gb|EDR22621.1| spliceosome RNA helicase Bat1, putative [Entamoeba dispar SAW760]
gi|165898511|gb|EDR25351.1| spliceosome RNA helicase Bat1, putative [Entamoeba dispar SAW760]
Length = 419
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 184/396 (46%), Positives = 259/396 (65%), Gaps = 13/396 (3%)
Query: 22 QAPDSVAT---KANGEAAKK-GYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECI 77
Q PD V T K + E A K YVG + F + LK E+L AI D GFEHPSEVQ + I
Sbjct: 7 QIPDYVPTTETKMDIEPANKDNYVG--TVAFSNMNLKKEILMAITDCGFEHPSEVQSQVI 64
Query: 78 PQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERF 137
P+A+L D++CQAKSGMGKTAVFV+S L Q V+ALV+CHTRELA Q EF+R
Sbjct: 65 PKALLKQDILCQAKSGMGKTAVFVISILNQGLCLGDYVSALVICHTRELALQAQKEFDRM 124
Query: 138 STYL-----PDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVR 192
L +I F GGV K + +K P IV+GTPGRI +L R K L L +
Sbjct: 125 KKRLCEATGKEIPTGTFVGGVEEKKDIEFIKTHKPTIVIGTPGRIASLVRQKALDLSKLD 184
Query: 193 HFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYV 252
F++DECDK+L S ++ EIF +P +KQVMMFSAT+S+ + +C+K++++ +E+++
Sbjct: 185 TFVIDECDKVLGSTS-EIEIGEIFISSPKEKQVMMFSATISETNKGICRKYLKNQLEVFI 243
Query: 253 DDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECN 312
DD KL LHGL ++ KL + +K + D++D +DFNQ ++F ++ R L K L +
Sbjct: 244 DDGEKLFLHGLHLYFKKLGDNDKKKTFMDIIDYIDFNQAIVFAENSERCRVLVKKLKQIG 303
Query: 313 FPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTY 372
+P ++ M QE R Y+ F++G R+LV+TDL GRGID+ +VN+V+N+DMP+ +D +
Sbjct: 304 YPCGILYGRMDQEIREKEYQRFRDGESRVLVSTDLCGRGIDVAKVNLVVNFDMPNDSDQF 363
Query: 373 LHRVGRAGRFGTKGLAITFVSSASDSDILNQV-SKF 407
LHRVGRAGRFGTKG+AI+F+ + D +L +V S+F
Sbjct: 364 LHRVGRAGRFGTKGVAISFIDTEEDDKVLKEVQSRF 399
>gi|402073041|gb|EJT68685.1| hypothetical protein GGTG_13748, partial [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 406
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 190/382 (49%), Positives = 254/382 (66%), Gaps = 15/382 (3%)
Query: 4 TRDNEYEDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVD 63
T +N+YE E DY + DS TK + + S F F LK E+L AI D
Sbjct: 27 TPENDYE-EHGDYSDGPMLVNDSDNTKEHNTCNPR-------SDFYAFSLKTEILNAIED 78
Query: 64 SGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHT 123
GFEH SEVQ CIPQA++G D+ICQA SG+GKTAVFVLSTLQQ EP +ALVLCHT
Sbjct: 79 CGFEHASEVQRICIPQAVIGKDIICQASSGLGKTAVFVLSTLQQAEPIASICSALVLCHT 138
Query: 124 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNEC--PQIVVGTPGRILALA 181
ELA QI E++RFS ++PDI +AVF+GG DLL+N+ P I++ TPGR+ AL
Sbjct: 139 CELALQIYTEYKRFSKHMPDINIAVFFGGRPFYKDTDLLQNKSTHPHIIISTPGRLKALM 198
Query: 182 RDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHD-KQVMMFSATLSKEIRPVC 240
R +L L +R +LDECD+M+ D+ RDVQ+IF+ TP + +Q M+FSATLS++I+ +C
Sbjct: 199 RWGNLRLDGLRTLVLDECDQMIGQPDIYRDVQDIFRCTPQNQRQFMVFSATLSEDIKQIC 258
Query: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSR 300
K M++P+E+ + TL Q YI L+E EK +L+DLL + F Q +IFVKS R
Sbjct: 259 KAEMREPIEVQIKGTISKTLR---QDYIVLNEQEKINRLHDLLGEVPFRQAIIFVKSAGR 315
Query: 301 AAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGN-KRILVATDLVGRGIDIERVNI 359
+ +N+ L + F SI IHSG+SQ++R+ Y K + R+ VATD+ RGI++E V++
Sbjct: 316 STWVNRSLQKRGFYSIEIHSGISQDDRIHCYNQLKHSDIMRVCVATDVFSRGINLEGVDL 375
Query: 360 VINYDMPDSADTYLHRVGRAGR 381
VINYDMP +AD+YLHRVGRAGR
Sbjct: 376 VINYDMPANADSYLHRVGRAGR 397
>gi|324505647|gb|ADY42424.1| Spliceosome RNA helicase BAT1 [Ascaris suum]
Length = 275
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 171/245 (69%), Positives = 196/245 (80%), Gaps = 7/245 (2%)
Query: 7 NEYEDELLDYEEEDAQAPDSVATKA-NGEAAKK----GYVGIHSSGFRDFLLKPELLRAI 61
N ED+LLDYEEE +A D ATKA NG A+K Y IHSSGFRDFLLKPELLRAI
Sbjct: 3 NMDEDQLLDYEEEQEEATD--ATKAENGTTAEKKIKGTYASIHSSGFRDFLLKPELLRAI 60
Query: 62 VDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLC 121
VD GFEHPSEVQHECIPQAILGMD++CQAKSGMGKTAVFVL+TLQQ EP G+V+ LV+C
Sbjct: 61 VDCGFEHPSEVQHECIPQAILGMDIVCQAKSGMGKTAVFVLATLQQLEPVDGEVSVLVMC 120
Query: 122 HTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALA 181
HTRELA+QI E+ERFS Y P IK+ VF+GG+ IK +++LKN P IVVGTPGR L LA
Sbjct: 121 HTRELAFQISKEYERFSKYYPGIKIGVFFGGMPIKKDEEVLKNNTPHIVVGTPGRTLQLA 180
Query: 182 RDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCK 241
R L L +++F+LDECDKM+ DMRRDVQEI KMTP +KQVMMFSATL K++R VCK
Sbjct: 181 RQGSLKLNKIKYFVLDECDKMIGDNDMRRDVQEIVKMTPQEKQVMMFSATLPKDLRAVCK 240
Query: 242 KFMQD 246
KFMQD
Sbjct: 241 KFMQD 245
>gi|37779016|gb|AAP20168.1| DEAD/H box polypeptide [Pagrus major]
Length = 229
Score = 344 bits (883), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 162/225 (72%), Positives = 194/225 (86%)
Query: 136 RFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFI 195
RFS Y+P +KV+VF+GG+ IK +++L+ CP IVVGTPGR LAL +K L+LKNV+HF+
Sbjct: 5 RFSKYMPTVKVSVFFGGMAIKKDEEVLRKNCPHIVVGTPGRTLALIANKSLNLKNVKHFV 64
Query: 196 LDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDE 255
LDECDKMLE LDMRRDVQEIF++TPH+KQVMMFSATLSKEIRPVC+KFMQDPME++VDDE
Sbjct: 65 LDECDKMLEQLDMRRDVQEIFRLTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEVFVDDE 124
Query: 256 AKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPS 315
KLTLHGL Q+Y KL + EKNRKL DLLD L+FNQVVIFVKSV R L++LLVE NFP+
Sbjct: 125 TKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVHRCVALSQLLVEQNFPA 184
Query: 316 ICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIV 360
I IH GM+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV
Sbjct: 185 IAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIV 229
>gi|71982862|ref|NP_001021986.1| Protein HEL-1, isoform b [Caenorhabditis elegans]
gi|25809203|emb|CAD57690.1| Protein HEL-1, isoform b [Caenorhabditis elegans]
Length = 268
Score = 340 bits (872), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 165/239 (69%), Positives = 192/239 (80%), Gaps = 2/239 (0%)
Query: 10 EDELLDYEEEDAQAPDSVATKANGEAAK-KG-YVGIHSSGFRDFLLKPELLRAIVDSGFE 67
E++LLDYEEE + D G+A K KG Y IHSSGFRDFLLKPE+LRAI D GFE
Sbjct: 3 EEQLLDYEEEQEEIQDKQPEVGGGDARKTKGTYASIHSSGFRDFLLKPEILRAIGDCGFE 62
Query: 68 HPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELA 127
HPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFV++TLQQ EP G+V+ + +CHTRELA
Sbjct: 63 HPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELA 122
Query: 128 YQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLS 187
+QI E+ERFS YLP +KVAVF+GG+ IK ++ L N+CP IVVGTPGR+LALAR L
Sbjct: 123 FQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIVVGTPGRMLALARSGKLK 182
Query: 188 LKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQD 246
L V++F+LDECDKM+ DMRRDVQEI KMTP KQVMMFSATL KE+R VCK+FMQD
Sbjct: 183 LDKVKYFVLDECDKMIGDADMRRDVQEIVKMTPQQKQVMMFSATLPKELRTVCKRFMQD 241
>gi|432094505|gb|ELK26064.1| ATP-dependent RNA helicase DDX39A [Myotis davidii]
Length = 284
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 164/264 (62%), Positives = 207/264 (78%), Gaps = 5/264 (1%)
Query: 141 LPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECD 200
+P + V+VF+GG++ K +++LK C TPGRILAL + L+L+NV+HF+LDE +
Sbjct: 1 MPSVTVSVFFGGLSTKKDEEVLKKSC-----RTPGRILALVLNSSLNLRNVKHFVLDEHE 55
Query: 201 KMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTL 260
+MLE LDMRRDVQEIF++ P D+Q MMFSATLSK+IRPVC KFMQDP+E+ VD + KLTL
Sbjct: 56 QMLEQLDMRRDVQEIFRLRPCDRQCMMFSATLSKQIRPVCMKFMQDPVEVLVDKDTKLTL 115
Query: 261 HGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHS 320
HGL Q+Y+KL + EKN KL +LLD L+FNQVVIFV+SV R L +LL E NFP+I IH
Sbjct: 116 HGLQQYYVKLKDSEKNCKLLNLLDVLEFNQVVIFVRSVQRCTALAQLLGEQNFPAIAIHR 175
Query: 321 GMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAG 380
M+QEERL RY+ FK+ +RILVAT+L GR +DIERVN+V NYDMP+ ++TYLH V AG
Sbjct: 176 AMAQEERLARYQQFKDFRRRILVATNLFGRWMDIERVNVVFNYDMPEDSNTYLHWVACAG 235
Query: 381 RFGTKGLAITFVSSASDSDILNQV 404
RFGTKGLAITFVS +D+ ILN V
Sbjct: 236 RFGTKGLAITFVSHENDAKILNDV 259
>gi|312382514|gb|EFR27948.1| hypothetical protein AND_04792 [Anopheles darlingi]
Length = 481
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 174/243 (71%), Positives = 200/243 (82%), Gaps = 6/243 (2%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVA--TKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVD 63
DNE +LLDYEEED Q VA T+ + K YV IHSSGFRDFLLKPE+LRAIVD
Sbjct: 3 DNE---DLLDYEEED-QTEQVVAETTEQPKKDVKGTYVSIHSSGFRDFLLKPEILRAIVD 58
Query: 64 SGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHT 123
GFEHPSEVQHECIPQA+LGMD++CQAKSGMGKTAVFVL+TLQQ EP LV+CHT
Sbjct: 59 CGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPTESVPYVLVMCHT 118
Query: 124 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARD 183
RELA+QI E+ERF Y+P IKVAVF+GG+ I+ +++LK+ P I+VGTPGR+LAL R+
Sbjct: 119 RELAFQISKEYERFCKYMPSIKVAVFFGGMPIQKDEEVLKSTTPHIIVGTPGRVLALIRN 178
Query: 184 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF 243
K L+LKN++HFILDECDKMLE LDMRRDVQEIF+ TPH KQVMMFSATLSKEIRPVCKKF
Sbjct: 179 KKLNLKNLKHFILDECDKMLEQLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKKF 238
Query: 244 MQD 246
MQD
Sbjct: 239 MQD 241
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 115/159 (72%), Positives = 132/159 (83%)
Query: 246 DPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELN 305
DPME+YVDDE KLTLHGL QHY+KL E EKN+KL +LLD L+FNQVVIFVKSV R L
Sbjct: 299 DPMEVYVDDETKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCMALA 358
Query: 306 KLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDM 365
+LL E NFP+I IH GM QEERL+RY+ FK+ KRILVAT+L GRG+DIERVNIV NYDM
Sbjct: 359 QLLTEQNFPAIGIHRGMVQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDM 418
Query: 366 PDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
P+ +DTYLHRV RAGRFGTKGLAITF+S +D+ ILN V
Sbjct: 419 PEDSDTYLHRVARAGRFGTKGLAITFISDEADAKILNDV 457
>gi|442626187|ref|NP_001260100.1| helicase at 25E, isoform D [Drosophila melanogaster]
gi|440213395|gb|AGB92636.1| helicase at 25E, isoform D [Drosophila melanogaster]
Length = 305
Score = 337 bits (865), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 170/241 (70%), Positives = 198/241 (82%), Gaps = 8/241 (3%)
Query: 11 DELLDYEEEDAQAPDSVATKANGEAAKK----GYVGIHSSGFRDFLLKPELLRAIVDSGF 66
D+LLDYE+E+ +V N EA KK YV IHSSGFRDFLLKPE+LRAIVD GF
Sbjct: 5 DDLLDYEDEEQTETTAVE---NQEAPKKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCGF 61
Query: 67 EHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVT-ALVLCHTRE 125
EHPSEVQHECIPQA+LGMD++CQAKSGMGKTAVFVL+TLQQ EP+ LV+CHTRE
Sbjct: 62 EHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSDNNTCHVLVMCHTRE 121
Query: 126 LAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKD 185
LA+QI E+ERFS Y+P +KVAVF+GG+ I+ ++ LK+ P IVVGTPGRILAL R+K
Sbjct: 122 LAFQISKEYERFSKYMPTVKVAVFFGGMAIQKDEETLKSGTPHIVVGTPGRILALIRNKK 181
Query: 186 LSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQ 245
L+LK ++HF+LDECDKMLE LDMRRDVQEIF+ TPH KQVMMFSATLSK+IRPVCKKFMQ
Sbjct: 182 LNLKLLKHFVLDECDKMLEQLDMRRDVQEIFRSTPHGKQVMMFSATLSKDIRPVCKKFMQ 241
Query: 246 D 246
D
Sbjct: 242 D 242
>gi|167388903|ref|XP_001738737.1| ATP-dependent RNA helicase SUB2 [Entamoeba dispar SAW760]
gi|165897879|gb|EDR24925.1| ATP-dependent RNA helicase SUB2, putative [Entamoeba dispar SAW760]
Length = 419
Score = 337 bits (864), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 175/379 (46%), Positives = 250/379 (65%), Gaps = 9/379 (2%)
Query: 35 AAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGM 94
+ K YVG S F++ LK E++++I D GFEHPSEVQ + IP+A+L DV+CQAKSGM
Sbjct: 24 SNKDTYVGTVS--FQEMGLKKEIMQSITDCGFEHPSEVQSQVIPKALLRQDVLCQAKSGM 81
Query: 95 GKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYL-----PDIKVAVF 149
GKTAVFVLS L Q V+A+V+CHTRELA Q+ +EF+R L DI+ A +
Sbjct: 82 GKTAVFVLSILNQGLFLGDHVSAIVVCHTRELARQVQNEFDRMKKRLVESIGKDIQTASY 141
Query: 150 YGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMR 209
GG D LKN P I+VGTPGR+ +L L L + F++DECDK+L S
Sbjct: 142 IGGNPESNDVDDLKNRKPTIIVGTPGRLASLNNSGALDLSKLDTFVIDECDKILSS-KSE 200
Query: 210 RDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIK 269
D+ +F + +KQVMMFSAT+S++ + +C+K++++P E+++DD KL LHGL + K
Sbjct: 201 LDIMSLFMNSSKNKQVMMFSATISEQNKALCRKYLKNPFEVFIDDGEKLFLHGLHLYSKK 260
Query: 270 LSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLT 329
L ++EK KL ++LD +DFNQ +IF R + + L + +P ++ M + R
Sbjct: 261 LQDMEKQEKLGEILDEIDFNQAIIFADRKERCQAVVQRLKKEKYPCGILYGRMEEYLRER 320
Query: 330 RYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAI 389
++ F++G RILV+TDL GRGIDIE+VN+V+N+DM +D +LHRVGRAGRFGTKG+AI
Sbjct: 321 EFERFRKGESRILVSTDLCGRGIDIEKVNLVVNFDMASDSDQFLHRVGRAGRFGTKGVAI 380
Query: 390 TFVSSASDSDILNQV-SKF 407
+F+ + D +L +V S+F
Sbjct: 381 SFIDTEEDEKVLGEVQSRF 399
>gi|67467036|ref|XP_649638.1| DEAD/DEAH box helicase [Entamoeba histolytica HM-1:IMSS]
gi|56466118|gb|EAL44250.1| DEAD/DEAH box helicase, putative [Entamoeba histolytica HM-1:IMSS]
gi|407040845|gb|EKE40355.1| DEAD/DEAH box helicase, putative [Entamoeba nuttalli P19]
gi|449704037|gb|EMD44359.1| ATPdependent RNA helicase SUB2, putative [Entamoeba histolytica
KU27]
Length = 419
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 180/396 (45%), Positives = 257/396 (64%), Gaps = 13/396 (3%)
Query: 22 QAPDSVAT---KANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECI 77
Q PD V + K E + K YVG S F++ LK E++++I D GFEHPSEVQ + I
Sbjct: 7 QIPDFVQSETFKMQVEPSNKDTYVGTVS--FQEMGLKKEIMQSITDCGFEHPSEVQSQVI 64
Query: 78 PQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERF 137
P+A+L D++CQAKSGMGKTAVFVLS L Q V+A+V+CHTRELA Q+ +EF+R
Sbjct: 65 PKALLRQDILCQAKSGMGKTAVFVLSILNQGLFLGDHVSAIVICHTRELARQVQNEFDRM 124
Query: 138 STYL-----PDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVR 192
L DI+ A + GG D LKN P I+VGTPGR+ +L L L +
Sbjct: 125 KKRLVESIGKDIQTASYIGGNPESNDVDDLKNRKPTIIVGTPGRLASLNNSGALDLSKLD 184
Query: 193 HFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYV 252
F++DECDK+L S D+ +F + +KQVMMFSAT+S++ + +C+K++++P E+++
Sbjct: 185 TFVIDECDKILSS-KSELDIMSLFMSSSKNKQVMMFSATISEQNKALCRKYLKNPFEVFI 243
Query: 253 DDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECN 312
DD KL LHGL + KL ++EK KL ++LD +DFNQ +IF R + + L +
Sbjct: 244 DDGEKLFLHGLHLYSKKLQDMEKQDKLGEILDEIDFNQAIIFADRKERCQAIVQRLKKEK 303
Query: 313 FPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTY 372
+P ++ M + R ++ F++G RILV+TDL GRGIDIE+VN+V+N+DM +D +
Sbjct: 304 YPCGILYGRMEEYLREREFERFRKGESRILVSTDLCGRGIDIEKVNLVVNFDMALDSDQF 363
Query: 373 LHRVGRAGRFGTKGLAITFVSSASDSDILNQV-SKF 407
LHRVGRAGRFGTKG+AI+F+ + D +L +V S+F
Sbjct: 364 LHRVGRAGRFGTKGVAISFIDTEEDEKVLKEVQSRF 399
>gi|440302714|gb|ELP95021.1| ATP-dependent RNA helicase SUB2, putative [Entamoeba invadens IP1]
Length = 420
Score = 331 bits (848), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 176/374 (47%), Positives = 247/374 (66%), Gaps = 9/374 (2%)
Query: 37 KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGK 96
K YVGI F++ LK E+++AI D GFEHPSEVQ + IP+A++ D++CQAKSGMGK
Sbjct: 26 KDNYVGIIP--FQEMGLKKEIMQAITDCGFEHPSEVQSQVIPKALIRQDILCQAKSGMGK 83
Query: 97 TAVFVLSTLQQTE-PNPGQVTALVLCHTRELAYQICHEFERFSTYL-----PDIKVAVFY 150
TAVFV++ L Q V+ LV+CHT ELA Q+ EF+R L +I A +
Sbjct: 84 TAVFVITILNQGLFIGKKGVSTLVICHTHELAKQVQKEFDRMKKRLETAIEKEINTASYI 143
Query: 151 GGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRR 210
GG + LKN P IV+GTPGR+L L L L + F++DECDK+L S + +
Sbjct: 144 GGTPEADDAEDLKNRSPSIVIGTPGRLLGLFNKGVLDLSQLDTFVIDECDKVLSS-NSQI 202
Query: 211 DVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL 270
DV +F + KQ MMFSAT+S+ + +C+K++++P+E+++DD KL LHGL +Y KL
Sbjct: 203 DVTTLFMKSNKTKQTMMFSATISEPNKVICRKYLRNPLEVFIDDGEKLFLHGLKLYYKKL 262
Query: 271 SELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTR 330
+ +K KL D+LD +DFNQ +IFV R + + L + +P ++ M +E R
Sbjct: 263 DDKQKVAKLTDILDYIDFNQCMIFVDGKERCKVVIETLKKGEYPCGVLYGKMEEELREKE 322
Query: 331 YKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAIT 390
++ F++G RILVATDL GRGIDIERVN+V+N+DMP+ +D +LHRVGRAGRFGTKGLA++
Sbjct: 323 FERFRKGESRILVATDLCGRGIDIERVNLVVNFDMPEDSDQFLHRVGRAGRFGTKGLAVS 382
Query: 391 FVSSASDSDILNQV 404
FV S D I+++V
Sbjct: 383 FVDSEDDQKIMDEV 396
>gi|238593584|ref|XP_002393237.1| hypothetical protein MPER_07065 [Moniliophthora perniciosa FA553]
gi|215460419|gb|EEB94167.1| hypothetical protein MPER_07065 [Moniliophthora perniciosa FA553]
Length = 250
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 159/239 (66%), Positives = 187/239 (78%), Gaps = 2/239 (0%)
Query: 141 LPDIKVAVFYGGVNIKIHKDLL--KNECPQIVVGTPGRILALARDKDLSLKNVRHFILDE 198
+PD++++ FYGG + ++L K++CP IVV TPGR+ ALARDK L KNV+HF+LDE
Sbjct: 1 MPDVRISTFYGGTPVSKDAEVLRDKSKCPHIVVATPGRLNALARDKVLDAKNVKHFVLDE 60
Query: 199 CDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKL 258
CDKMLE LDMRRDVQEIF+ TPH KQVMMFSATL+KEIR CKKFM +P+EI+VDDE KL
Sbjct: 61 CDKMLEQLDMRRDVQEIFRTTPHHKQVMMFSATLAKEIRATCKKFMSNPLEIFVDDETKL 120
Query: 259 TLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICI 318
TLHGL QHY+KL E KNRKLN+LLD L+FNQVVIFVKSV+RA EL+KLLV CNFPSI I
Sbjct: 121 TLHGLQQHYVKLEENGKNRKLNELLDTLEFNQVVIFVKSVARAIELDKLLVSCNFPSIAI 180
Query: 319 HSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 377
HSG+ QEER+ RY FK KRILVATD+ GRGID+ERVNI +P L G
Sbjct: 181 HSGLQQEERIARYTAFKAFEKRILVATDIFGRGIDVERVNIGCQLRLPTGRRQLLDPCG 239
>gi|430813259|emb|CCJ29387.1| unnamed protein product [Pneumocystis jirovecii]
Length = 220
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 150/199 (75%), Positives = 175/199 (87%)
Query: 208 MRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHY 267
MRRD+QE+F+ TPH KQVMMFSATLS EIRP+CKKFMQ+P+EIYVDDE KLTLHGL QHY
Sbjct: 1 MRRDIQEVFRATPHQKQVMMFSATLSTEIRPICKKFMQNPLEIYVDDETKLTLHGLQQHY 60
Query: 268 IKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEER 327
+KL E KNRKLNDLLDAL+FNQVVIFVKSV RA+EL++LL ECNFPSICIH + QEER
Sbjct: 61 VKLEESAKNRKLNDLLDALEFNQVVIFVKSVQRASELDRLLRECNFPSICIHGALPQEER 120
Query: 328 LTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGL 387
++RYK FK NKRI VATD+ GRGIDIERVN+V NYD P ADTYLHRVGRAGRFGT+GL
Sbjct: 121 ISRYKLFKNFNKRICVATDVFGRGIDIERVNVVFNYDTPGDADTYLHRVGRAGRFGTRGL 180
Query: 388 AITFVSSASDSDILNQVSK 406
+ITFVSS+ D++IL+++ +
Sbjct: 181 SITFVSSSGDAEILDKIQE 199
>gi|62320763|dbj|BAD95431.1| DEAD BOX RNA helicase RH15 - like protein [Arabidopsis thaliana]
Length = 177
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 154/165 (93%), Positives = 160/165 (96%)
Query: 84 MDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPD 143
MDVICQAKSGMGKTAVFVLSTLQQ EP+PGQV+ALVLCHTRELAYQIC+EF RFSTYLPD
Sbjct: 1 MDVICQAKSGMGKTAVFVLSTLQQVEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPD 60
Query: 144 IKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 203
KV+VFYGGVNIKIHKDLLKNECP IVVGTPGR+LALAR+KDLSLKNVRHFILDECDKML
Sbjct: 61 TKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKML 120
Query: 204 ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPM 248
ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQD M
Sbjct: 121 ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDVM 165
>gi|86451928|gb|ABC97359.1| UAP56/BAT1 [Streblomastix strix]
Length = 272
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 156/243 (64%), Positives = 190/243 (78%)
Query: 162 LKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPH 221
L+++ P IVVGTPGR L + L + V HFI+DECDK+LE DMR DVQ IF P
Sbjct: 7 LRDQNPNIVVGTPGRTKQLIEQRALKVDKVAHFIIDECDKVLEKNDMRGDVQRIFVSCPI 66
Query: 222 DKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLND 281
KQVMMFSATL KE+RPV +KFM DPME++VD EA+LTLHGL Q+++KL E EKNRKL +
Sbjct: 67 QKQVMMFSATLPKEVRPVARKFMHDPMEVFVDAEAELTLHGLXQYFVKLEESEKNRKLMN 126
Query: 282 LLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRI 341
LLDAL+FNQVVIFV+S RA ELN+LL E FPSI IH + Q++RL RY+ FK+ RI
Sbjct: 127 LLDALEFNQVVIFVRSCMRAEELNRLLREQEFPSISIHGDLPQDQRLKRYQEFKDFQSRI 186
Query: 342 LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDIL 401
LV+TD+ GRG+DIERVNIV NYDMP+++D+YLHRV RAGRFGTKGLAITF SS D ++L
Sbjct: 187 LVSTDVFGRGMDIERVNIVFNYDMPENSDSYLHRVARAGRFGTKGLAITFSSSKEDREVL 246
Query: 402 NQV 404
+V
Sbjct: 247 EKV 249
>gi|227206296|dbj|BAH57203.1| AT5G11170 [Arabidopsis thaliana]
Length = 177
Score = 324 bits (831), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 154/165 (93%), Positives = 160/165 (96%)
Query: 84 MDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPD 143
MDVICQAKSGMGKTAVFVLSTLQQ EP+PGQV+ALVLCHTRELAYQIC+EF RFSTYLPD
Sbjct: 1 MDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPD 60
Query: 144 IKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 203
KV+VFYGGVNIKIHKDLLKNECP IVVGTPGR+LALAR+KDLSLKNVRHFILDECDKML
Sbjct: 61 TKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKML 120
Query: 204 ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPM 248
ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQD M
Sbjct: 121 ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDVM 165
>gi|443894077|dbj|GAC71427.1| hypothetical protein PANT_3d00031 [Pseudozyma antarctica T-34]
Length = 277
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 147/209 (70%), Positives = 178/209 (85%), Gaps = 2/209 (0%)
Query: 40 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 99
YVGIHS+GFRDFLLKPELLRAI D GFEHPSEVQ ECIPQ+ILGMDV+CQAKSGMGKTAV
Sbjct: 65 YVGIHSTGFRDFLLKPELLRAISDLGFEHPSEVQQECIPQSILGMDVVCQAKSGMGKTAV 124
Query: 100 FVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHK 159
FVL+TLQQ EP G+V+ LVLCHTRELAYQI +E+ RF+ Y+PD++ V YGG + ++
Sbjct: 125 FVLATLQQIEPVDGEVSVLVLCHTRELAYQIRNEYARFTKYMPDVRTGVIYGGTPVAENQ 184
Query: 160 DLLKN--ECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFK 217
+LK+ +CP I+VGTPGR+ AL RDK L + V+HF++DECDK+LE +DMRRDVQ+IF+
Sbjct: 185 AMLKDKTKCPHILVGTPGRMNALVRDKSLKVSGVKHFVIDECDKILEQVDMRRDVQDIFR 244
Query: 218 MTPHDKQVMMFSATLSKEIRPVCKKFMQD 246
TPH KQVMMFSATL+KE+RP CKKFMQ+
Sbjct: 245 ATPHHKQVMMFSATLAKEVRPTCKKFMQN 273
>gi|402468594|gb|EJW03725.1| hypothetical protein EDEG_01983 [Edhazardia aedis USNM 41457]
Length = 450
Score = 321 bits (822), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 184/408 (45%), Positives = 254/408 (62%), Gaps = 53/408 (12%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F+DFLL+ EL +I D FEHPS+VQ +CIP+AILG D++ QAKSG GKTAVFVLS LQQ
Sbjct: 27 FKDFLLRDELNESIKDIQFEHPSDVQQQCIPKAILGCDILAQAKSGTGKTAVFVLSVLQQ 86
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLP-DIKVAVFYGGVNI----------- 155
+ + Q++ + L HT+ELA Q+C+EF+RF + D+KV FYGGV++
Sbjct: 87 IKDS--QLSCVCLVHTKELAQQVCNEFKRFVRHFKFDVKVEEFYGGVSVENDLVRLGKSE 144
Query: 156 -------------KIHK-----------------DLLKNEC--PQIVVGTPGRILALARD 183
K+H ++ NE P I +GTPGR L L +
Sbjct: 145 KADTFNPGYANRFKVHSAERSDHGFGSRINDSRTGIMINESNEPTIFIGTPGRTLDLLKR 204
Query: 184 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF 243
+ V+HF++DE D++L L MR+ VQ+IF TP KQ M+F+ATL+ EI+ C F
Sbjct: 205 NAVDFSRVKHFVMDEVDELLVDLSMRKTVQDIFFHTPVQKQTMLFTATLNDEIKETCLLF 264
Query: 244 MQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-------KNRKLNDLLDALDFNQVVIFVK 296
++DP + +D+E KLTLHGL Q ++ E K + L +++D +FNQ+VIFV+
Sbjct: 265 LKDPHVVIIDEEKKLTLHGLQQFFVTTQYAEGLNETTPKFKVLENIIDNTEFNQMVIFVR 324
Query: 297 SVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIER 356
RA L KLL FP+I IHSGM + RL + FK +RIL+AT+L+ RGID++
Sbjct: 325 DKHRAKILAKLLRINAFPAIEIHSGMDVKTRLESFLRFKNLKERILIATNLMARGIDVQD 384
Query: 357 VNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
VN+V+N+DMP+ A+TYLHRVGRAGRF TKG+AI+ + S +D ILN V
Sbjct: 385 VNVVVNFDMPECAETYLHRVGRAGRFETKGIAISLLESPADKTILNDV 432
>gi|62319895|dbj|BAD93957.1| DEAD BOX RNA helicase RH15 - like protein [Arabidopsis thaliana]
Length = 208
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 152/160 (95%), Positives = 158/160 (98%)
Query: 247 PMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNK 306
PMEIYVDDEAKLTLHGLVQHYIKLSE+EKNRKLNDLLDALDFNQVVIFVKSVSRAAELNK
Sbjct: 28 PMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNK 87
Query: 307 LLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMP 366
LLVECNFPSICIHSGMSQEERLTRYK FKEG+KRILVATDLVGRGIDIERVNIVINYDMP
Sbjct: 88 LLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMP 147
Query: 367 DSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
DSADTYLHRVGRAGRFGTKGLAITFV+SASDS++LNQV +
Sbjct: 148 DSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQE 187
>gi|74191580|dbj|BAE30363.1| unnamed protein product [Mus musculus]
Length = 227
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 147/199 (73%), Positives = 172/199 (86%)
Query: 207 DMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQH 266
+MRRDVQEIF++TPH+KQ MMFSATLSKEIRPVC+KFMQDPME++VDDE KLTLHGL Q+
Sbjct: 5 NMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQY 64
Query: 267 YIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEE 326
Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L +LLVE NFP+I IH GM+QEE
Sbjct: 65 YVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEE 124
Query: 327 RLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKG 386
RL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYDMP+ +DTYLHRV RAGRFGTKG
Sbjct: 125 RLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKG 184
Query: 387 LAITFVSSASDSDILNQVS 405
LA+TFVS +D+ ILN V
Sbjct: 185 LAVTFVSDENDAKILNDVQ 203
>gi|237651933|gb|ACR08655.1| helicase at 25E, partial [Drosophila silvestris]
Length = 224
Score = 314 bits (804), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 151/220 (68%), Positives = 181/220 (82%), Gaps = 2/220 (0%)
Query: 11 DELLDYEEEDAQAPDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHP 69
D+LLDYE+E+ +V ++ + KG YV IHSSGFRDFLLKPE+LRAIVD GFEHP
Sbjct: 5 DDLLDYEDEEQNETTAVESQEAPKKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCGFEHP 64
Query: 70 SEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEP-NPGQVTALVLCHTRELAY 128
SEVQHECIPQA+LGMD++CQAKSGMGKTAVFVL+TLQQ EP + LV+CHTRELA+
Sbjct: 65 SEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPADNNTCHVLVMCHTRELAF 124
Query: 129 QICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSL 188
QI E+ERFS Y+P +KVAVF+GG+ I+ ++ LKN P IVVGTPGRILAL R+K L+L
Sbjct: 125 QISKEYERFSKYMPTVKVAVFFGGLAIQKDEETLKNGTPHIVVGTPGRILALIRNKKLNL 184
Query: 189 KNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMF 228
K+++HF+LDECDKMLE LDMRRDVQEIF+ TPH KQVMMF
Sbjct: 185 KHLKHFVLDECDKMLEQLDMRRDVQEIFRSTPHGKQVMMF 224
>gi|413950342|gb|AFW82991.1| hypothetical protein ZEAMMB73_566534, partial [Zea mays]
Length = 185
Score = 314 bits (804), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 150/165 (90%), Positives = 156/165 (94%)
Query: 84 MDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPD 143
MDVICQAKSGMGKTAVFVLSTLQQ +P GQV ALVLCHTRELAYQICHEFERFS YLP+
Sbjct: 1 MDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVAALVLCHTRELAYQICHEFERFSKYLPE 60
Query: 144 IKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 203
++VAVFYGGV+IK HKDLLKNECP IVVGTPGRILALARDKDL LKNVRHFILDECDKML
Sbjct: 61 LRVAVFYGGVHIKNHKDLLKNECPHIVVGTPGRILALARDKDLPLKNVRHFILDECDKML 120
Query: 204 ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPM 248
ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCK+FMQD M
Sbjct: 121 ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKRFMQDVM 165
>gi|227206242|dbj|BAH57176.1| AT5G11200 [Arabidopsis thaliana]
Length = 180
Score = 313 bits (803), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 151/159 (94%), Positives = 157/159 (98%)
Query: 248 MEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKL 307
MEIYVDDEAKLTLHGLVQHYIKLSE+EKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKL
Sbjct: 1 MEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKL 60
Query: 308 LVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPD 367
LVECNFPSICIHSGMSQEERLTRYK FKEG+KRILVATDLVGRGIDIERVNIVINYDMPD
Sbjct: 61 LVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPD 120
Query: 368 SADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
SADTYLHRVGRAGRFGTKGLAITFV+SASDS++LNQV +
Sbjct: 121 SADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQE 159
>gi|440494146|gb|ELQ76551.1| ATP-dependent RNA helicase [Trachipleistophora hominis]
Length = 397
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 164/365 (44%), Positives = 230/365 (63%), Gaps = 6/365 (1%)
Query: 46 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTL 105
S F + LLK EL++AI D+ EHPS VQ + IP+A+LG D+ICQAKSG GKT VFVLS L
Sbjct: 25 SSFPELLLKDELIKAIRDANLEHPSAVQQQVIPKAVLGADIICQAKSGTGKTVVFVLSAL 84
Query: 106 QQTEP---NPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL 162
Q+ +P +V + + +T+E+ QI +EF RF +Y D+KV + +GGV++ + L
Sbjct: 85 QRINAEDVSPARVQVMAVANTKEMVVQIANEFRRFMSY-TDLKVEMVFGGVDVNGDVEKL 143
Query: 163 KNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHD 222
K +VVGTPGR+ L + L + +R I+DE D +L SL R VQ I TP
Sbjct: 144 KARV-DVVVGTPGRLFDLIQRGALDVSALRILIIDEVDSILSSLSSRWTVQRIIYRTPVA 202
Query: 223 KQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDL 282
KQ M+F+ATLS E++ C +++P + VD+E KLTLHGL Q Y+ + E K KL L
Sbjct: 203 KQTMLFTATLSNEMKSTCLLMVRNPFVLQVDEERKLTLHGLEQGYVNVIEDNKRDKLIGL 262
Query: 283 LDAL-DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRI 341
+D++ D +Q VIF + R L + L P++ I S ER+ R+ FK N R
Sbjct: 263 IDSIRDISQCVIFCRDKRRVEVLCEHLKTKGLPAVAITSDYDTNERMQRFMSFKNLNYRF 322
Query: 342 LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDIL 401
LV T+L+ RGIDI +N+V+NYDM + A TYLHRVGRAGRF T+G A++F+ + D +L
Sbjct: 323 LVTTNLMARGIDIAEINLVVNYDMAEDAQTYLHRVGRAGRFETRGTAVSFICNEEDIVVL 382
Query: 402 NQVSK 406
N+V +
Sbjct: 383 NEVQE 387
>gi|402072144|gb|EJT68072.1| hypothetical protein GGTG_14349 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 221
Score = 307 bits (787), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 144/199 (72%), Positives = 167/199 (83%)
Query: 208 MRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHY 267
MRRDVQEIF+ TP KQVMMFSATLS EI+P+CKKFMQ+P E YVD++ KLTLHGL Q+Y
Sbjct: 1 MRRDVQEIFRATPQQKQVMMFSATLSDEIKPICKKFMQNPTEHYVDEDTKLTLHGLQQYY 60
Query: 268 IKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEER 327
+ L E EKNRKLN+LLD L FNQV+IFVKS RA EL+KLL ECNFPSI +HSG+SQEER
Sbjct: 61 LALEEREKNRKLNELLDDLQFNQVIIFVKSTLRATELDKLLRECNFPSIAVHSGVSQEER 120
Query: 328 LTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGL 387
+ RYK FKE NKRI VATD+ GRGIDIER+N+ INYDMP AD+YLHRVGRAGRFGTKGL
Sbjct: 121 IRRYKEFKEFNKRICVATDVFGRGIDIERINLAINYDMPADADSYLHRVGRAGRFGTKGL 180
Query: 388 AITFVSSASDSDILNQVSK 406
AI+FV++ D D+L + K
Sbjct: 181 AISFVTNDQDKDVLKLIEK 199
>gi|195448911|ref|XP_002071867.1| GK10220 [Drosophila willistoni]
gi|194167952|gb|EDW82853.1| GK10220 [Drosophila willistoni]
Length = 379
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 156/359 (43%), Positives = 231/359 (64%), Gaps = 13/359 (3%)
Query: 47 GFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQ 106
G+ LKPE+LR + E+ +V EC Q + G+D++CQ S + KT V VL+TLQ
Sbjct: 5 GYPKIPLKPEILRILA----ENQCDVNQECFSQVVHGVDIVCQTTSDVIKTMVVVLATLQ 60
Query: 107 QTEP---NPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK 163
Q P N LV+C++ ++A ++ +++RF+ Y PDI + G+ I+ + +
Sbjct: 61 QLYPAEDNSMSCRVLVMCNSCDMAQEMVKKYKRFAKYFPDISI-----GLAIEEEESFIP 115
Query: 164 NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDK 223
E P +V GTP R L L R K +++ ++RHFILDECDKM E L MRR V EIF+ +PH K
Sbjct: 116 -ESPHVVFGTPIRFLDLFRKKIVNVSHLRHFILDECDKMFEQLTMRRAVFEIFRNSPHKK 174
Query: 224 QVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLL 283
QV+MFS L+K +R +CK+ M + E+YV+ +L L G QH+ + E EK+++L LL
Sbjct: 175 QVVMFSTELNKNVRNICKRLMHEHHEVYVNHNDQLCLQGWQQHFDYVEESEKSKRLFYLL 234
Query: 284 DALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILV 343
+ L+FNQVVIFV++V++ L + L++ NFP+I +H M Q++R+ Y F+ KRILV
Sbjct: 235 EILEFNQVVIFVETVTQCLTLVQQLIKLNFPAIALHGQMEQKQRVHHYHKFRGYYKRILV 294
Query: 344 ATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILN 402
+ +G+G+DI+ VNI+ Y MP + +YL RV RAGRFG KGL ITF+S+ D+ LN
Sbjct: 295 SNITLGQGMDIKGVNIIFVYQMPKDSISYLDRVARAGRFGAKGLGITFISNEYDAKFLN 353
>gi|429964461|gb|ELA46459.1| hypothetical protein VCUG_02054 [Vavraia culicis 'floridensis']
Length = 401
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 162/369 (43%), Positives = 227/369 (61%), Gaps = 10/369 (2%)
Query: 46 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTL 105
S F + LLK EL++AI D+ EHPS VQ + IP+A+LG D++CQAKSG GKT VFVLS L
Sbjct: 25 SSFPELLLKDELIKAIRDANLEHPSAVQQQVIPKAVLGADILCQAKSGTGKTVVFVLSAL 84
Query: 106 QQTEPNPGQV-------TALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIH 158
Q+ G+V + + +T+E+ QI +EF+RF Y D+ V + +GGV++
Sbjct: 85 QRISREEGEVHDTCARVQVVAIANTKEMVVQIANEFKRFMCY-TDLNVEMVFGGVDVNGD 143
Query: 159 KDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKM 218
+ LK +VVGTPGR+ L L + +R I+DE D +L SL R VQ I
Sbjct: 144 IEKLKGRV-DVVVGTPGRLFDLIVRGALDVSQLRILIIDEVDSILSSLSSRWTVQRIIYK 202
Query: 219 TPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRK 278
TP KQ M+F+ATLS E+R C +++P + VD+E KLTLHGL Q Y+ ++E K K
Sbjct: 203 TPVGKQTMLFTATLSDEMRNTCLLMVRNPFVLQVDEERKLTLHGLEQGYVNVAEDSKRDK 262
Query: 279 LNDLLDAL-DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEG 337
L L+D + D +Q VIF + R L + L P++ I S ER+ R+ FK
Sbjct: 263 LIGLIDGIRDISQCVIFCRDKRRVEVLAEHLKTKGLPAVSITSDYDTNERMQRFMSFKNL 322
Query: 338 NKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASD 397
+ R LV T+L+ RGIDI +N+V+NYDM + A TYLHRVGRAGRF T+G A++F+ + D
Sbjct: 323 DYRFLVTTNLMARGIDIAEINLVVNYDMAEDAQTYLHRVGRAGRFETRGTAVSFICNEED 382
Query: 398 SDILNQVSK 406
+LN+V +
Sbjct: 383 IVVLNEVQE 391
>gi|391335247|ref|XP_003742007.1| PREDICTED: ATP-dependent RNA helicase DDX39A-like [Metaseiulus
occidentalis]
Length = 389
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 159/371 (42%), Positives = 236/371 (63%), Gaps = 12/371 (3%)
Query: 43 IHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVL 102
+HS F F L+PEL++A+ D G+ PS +Q + +P A+ G D++CQ+K+G GKTAVF+L
Sbjct: 1 MHS--FTSFGLRPELIKAVEDRGYCKPSPIQEKALPDALAGHDLLCQSKTGSGKTAVFIL 58
Query: 103 STLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL 162
STL Q E + +VL TRELA Q E++ +L + + + F+GG+ + ++ +
Sbjct: 59 STLNQMEFEDF-IETVVLVPTRELAVQTVAEYQMLGKFLKNCRTSAFFGGLPLNVNIANI 117
Query: 163 KNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLE-SLDMRRDVQEIFKMTPH 221
++ P IVV TPGR+ L +++ +SL+ VRHFILDECD +L + +M D++ I P
Sbjct: 118 RSSAPNIVVATPGRMRVLVQERYISLRRVRHFILDECDMLLRPTSNMCCDIRYILDHCPE 177
Query: 222 DKQVMMFSATLS-----KEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLS-ELEK 275
D+QV MF+AT++ +E R + K M P I V + +LTL ++Q+ + L E +K
Sbjct: 178 DRQVQMFTATITVPEAEREKRFL--KLMHCPKYILVKKQCELTLSSVLQYRLTLEDECKK 235
Query: 276 NRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFK 335
R L +LLD ++FNQV IFV +V R L +L E NF +I +HS M+QE+RL + FK
Sbjct: 236 TRALINLLDRIEFNQVAIFVNTVERCCVLCGILEEKNFSAIAVHSNMTQEDRLENFAKFK 295
Query: 336 EGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSA 395
+ +RI+VATDL+GRGID+E V VINYD+P TYLHR+GR GR + LA++F S
Sbjct: 296 DFRRRIVVATDLMGRGIDVEFVTFVINYDVPIDEKTYLHRIGRTGRMDRRALAVSFCVSQ 355
Query: 396 SDSDILNQVSK 406
D +L V +
Sbjct: 356 QDQGVLQDVQE 366
>gi|242007507|ref|XP_002424581.1| ATP-dependent RNA helicase WM6, putative [Pediculus humanus
corporis]
gi|212508024|gb|EEB11843.1| ATP-dependent RNA helicase WM6, putative [Pediculus humanus
corporis]
Length = 315
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 152/204 (74%), Positives = 174/204 (85%)
Query: 203 LESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHG 262
++ L MRRDVQEIF+ TPH KQVMMFSATLSKEIRPVCKKFMQDPME+YV+DEAKLTLHG
Sbjct: 80 MDILYMRRDVQEIFRNTPHAKQVMMFSATLSKEIRPVCKKFMQDPMEVYVNDEAKLTLHG 139
Query: 263 LVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGM 322
L QHY+KL E EKN+KL +LLD L+FNQVVIFVKSV R L +LL E NFP+I IH GM
Sbjct: 140 LQQHYVKLKENEKNKKLFELLDILEFNQVVIFVKSVQRCMALAQLLTEQNFPAIAIHRGM 199
Query: 323 SQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRF 382
QEERL+RY+ FK+ KRILVAT+L GRG+DIERVNIV NYDMP+ +DTYLHRV RAGRF
Sbjct: 200 VQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRF 259
Query: 383 GTKGLAITFVSSASDSDILNQVSK 406
GTKGLAITFVS +D+ ILN+V +
Sbjct: 260 GTKGLAITFVSEEADAKILNEVQE 283
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 60/79 (75%), Gaps = 2/79 (2%)
Query: 11 DELLDYEEEDAQAP--DSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEH 68
++LLDYE+E+ P + A E K YV IHSS F+DFLLKPE++R+I+D GFEH
Sbjct: 5 EDLLDYEDEEQTEPVVEGSIDGAGKEKVKGTYVSIHSSAFKDFLLKPEIVRSIMDCGFEH 64
Query: 69 PSEVQHECIPQAILGMDVI 87
PSEVQHECIPQAILGMD++
Sbjct: 65 PSEVQHECIPQAILGMDIL 83
>gi|148678968|gb|EDL10915.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 39, isoform CRA_a [Mus
musculus]
Length = 225
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 140/202 (69%), Positives = 166/202 (82%), Gaps = 1/202 (0%)
Query: 6 DNEYEDELLDYEE-EDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDS 64
+ + E+ELLDY+E E+ QAP + K YV IHSSGFRDFLLKPELLRAIVD
Sbjct: 20 EQDVENELLDYDEDEEPQAPQESTPAPPKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDC 79
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTR
Sbjct: 80 GFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVSVLVMCHTR 139
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDK 184
ELA+QI E+ERFS Y+P +KV+VF+GG++IK +D+LK CP +VVGTPGRILAL R +
Sbjct: 140 ELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEDVLKKNCPHVVVGTPGRILALVRSR 199
Query: 185 DLSLKNVRHFILDECDKMLESL 206
L+L+NV+HF+LDECDKMLE L
Sbjct: 200 SLNLRNVKHFVLDECDKMLEQL 221
>gi|145520549|ref|XP_001446130.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124413607|emb|CAK78733.1| unnamed protein product [Paramecium tetraurelia]
Length = 429
Score = 297 bits (760), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 171/386 (44%), Positives = 233/386 (60%), Gaps = 19/386 (4%)
Query: 40 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 99
Y + S F++F LK ELLRA+ ++GFEHP+ VQ E + A+ G +ICQAK+G GKTAV
Sbjct: 25 YDNYNVSQFKNFGLKEELLRAVKEAGFEHPTRVQAESLTNALQGEQLICQAKAGTGKTAV 84
Query: 100 FVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVN-IKIH 158
FVL+ L +V LV+ HTRELA Q EF R ++ IKV FYGG + ++
Sbjct: 85 FVLTVLNTINTESNKVECLVITHTRELAQQARDEFLRLGKFMKSIKVECFYGGGEPVTVN 144
Query: 159 KDLLKNECPQIVVGTPGRILAL-ARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFK 217
++ PQIVVGTPGR+ L K L + +++FILDE D M+E L+MR+D+Q+IF
Sbjct: 145 ISTIETVKPQIVVGTPGRLKDLICEKKALKVDRLKYFILDEADTMIEDLNMRKDIQDIFL 204
Query: 218 MTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY--VDDEAKLTLHGLVQHYIKLSELEK 275
TP DKQ M FSAT ++ R KKF+ D IY +L L L Q+Y+K+ E K
Sbjct: 205 RTPQDKQFMAFSATFTESSRTSLKKFIADNKHIYEITIKPEQLFLDKLKQYYLKVPETLK 264
Query: 276 NRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMS------QEERLT 329
L +L+ NQ +IFVKS +A L L + S+ G + Q+ R
Sbjct: 265 FHYLRQILNTCKLNQCIIFVKSSEKADALVAELKKKGEDSVRQLYGGNRLGPDHQKMRQK 324
Query: 330 RYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAI 389
Y+ F+ G+ R+LVAT+L+GRGIDI++VN VIN+DMPDS +TYLHRVGRAGR T G+AI
Sbjct: 325 TYEQFRNGHFRLLVATNLMGRGIDIDKVNYVINFDMPDSLETYLHRVGRAGRQETNGVAI 384
Query: 390 TFV---------SSASDSDILNQVSK 406
+FV +D ++L Q+ K
Sbjct: 385 SFVKYEEETSDGKKQTDDEVLQQILK 410
>gi|145508319|ref|XP_001440109.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407315|emb|CAK72712.1| unnamed protein product [Paramecium tetraurelia]
Length = 424
Score = 297 bits (760), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 169/380 (44%), Positives = 235/380 (61%), Gaps = 19/380 (5%)
Query: 46 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTL 105
S F++F LK E+LRA+ ++GFEHP+ VQ E + A+LG +ICQAK+G GKTAVFVL+ L
Sbjct: 26 SQFKNFGLKEEILRAVKEAGFEHPTRVQAESLTNALLGEQLICQAKAGTGKTAVFVLTVL 85
Query: 106 QQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVN-IKIHKDLLKN 164
+ +V LV+ HTRELA Q EF R ++ ++KV FYGG + ++ ++
Sbjct: 86 NTINIDSNKVECLVITHTRELAQQARDEFLRLGKFMKNVKVECFYGGGEPVSVNIQTIET 145
Query: 165 ECPQIVVGTPGRILAL-ARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDK 223
PQIVVGTPGR+ L K L + +++FILDE D M+E L+MR+D+Q+IF +P +K
Sbjct: 146 VKPQIVVGTPGRLKDLICERKALKVDRLKYFILDEADTMIEDLNMRKDIQDIFFKSPQEK 205
Query: 224 QVMMFSATLSKEIRPVCKKFMQDPMEIY--VDDEAKLTLHGLVQHYIKLSELEKNRKLND 281
Q M FSAT ++ R K+F+ D IY +L L L Q+Y+K+ E K L
Sbjct: 206 QFMAFSATFTESSRTSLKRFIADNKHIYEITIKPEQLFLDKLKQYYMKVPEALKFHYLRQ 265
Query: 282 LLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMS------QEERLTRYKGFK 335
+L+ NQ +IFVKS +A L L + S+ G + Q+ R Y+ F+
Sbjct: 266 ILNTCKLNQCIIFVKSSEKADALVTELKKKGEESVRQLYGGNRLGPDHQKMRQKTYEQFR 325
Query: 336 EGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSS- 394
G+ R+LVAT+L+GRGIDI++VN VIN+DMPDS +TYLHRVGRAGR T G+AI+FV S
Sbjct: 326 NGHFRLLVATNLMGRGIDIDKVNYVINFDMPDSLETYLHRVGRAGRQETNGVAISFVKSE 385
Query: 395 --------ASDSDILNQVSK 406
SD D+L Q+ K
Sbjct: 386 EESNDGKKQSDDDVLQQILK 405
>gi|344259201|gb|EGW15305.1| Spliceosome RNA helicase Bat1 [Cricetulus griseus]
Length = 229
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 142/203 (69%), Positives = 172/203 (84%), Gaps = 2/203 (0%)
Query: 6 DNEYEDELLDYEEEDAQ-APDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVD 63
+N+ ++ELLDYE+++ + A T+A + KG YV IHSSGFRDFLLKPELLRAIVD
Sbjct: 3 ENDVDNELLDYEDDEVETAAGGDGTEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVD 62
Query: 64 SGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHT 123
GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKT VFVL+TLQQ EP GQV+ LV+CHT
Sbjct: 63 CGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTVVFVLATLQQLEPITGQVSVLVMCHT 122
Query: 124 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARD 183
RELA+QI E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRILALAR+
Sbjct: 123 RELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARN 182
Query: 184 KDLSLKNVRHFILDECDKMLESL 206
K L+LK+++HFILDECDKMLE L
Sbjct: 183 KSLNLKHIKHFILDECDKMLEQL 205
>gi|253742308|gb|EES99149.1| ATP-dependent RNA helicase p47, putative [Giardia intestinalis ATCC
50581]
Length = 454
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 165/398 (41%), Positives = 235/398 (59%), Gaps = 7/398 (1%)
Query: 11 DELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPS 70
DEL + A+A V +A + + G + + F DF +K E+L+AIV +GFE PS
Sbjct: 34 DELALLADAGAEATSGVLRQARAGSPRSGTL---LTRFSDFNIKDEVLQAIVSNGFESPS 90
Query: 71 EVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPN--PGQVTALVLCHTRELAY 128
+VQ IP A+ DVICQAKSG GKTAVFVLS L +P P +V AL+LC+T ELA
Sbjct: 91 DVQSMAIPPALEHKDVICQAKSGKGKTAVFVLSLLHMIDPQAAPHKVQALILCNTHELAM 150
Query: 129 QICHEFERFSTYLPDIKVAVF--YGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDL 186
QI EF RF+ LPDIK + GGV + +H LK++ IVVGT GR+ L L
Sbjct: 151 QIYKEFARFAINLPDIKDKILCAIGGVTVSLHVKALKSKDVSIVVGTIGRVSDLMERGAL 210
Query: 187 SLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQD 246
L +++ +LDE D + + D + + + P D Q ++F+AT ++ + ++D
Sbjct: 211 DLSCIKYLVLDEFDALFKEEDNFKKITGLISKMPADHQTLLFTATFTEHSEKFARSILRD 270
Query: 247 PMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNK 306
+ D+ +L L GL+Q+Y E +K L D L L F+Q VIF K +SR LN+
Sbjct: 271 GYVAILVDDKQLVLTGLMQYYFDAPEEKKLHILLDCLRLLPFSQAVIFAKDISRVTALNE 330
Query: 307 LLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMP 366
L E +C M ++R ++GFK+ RILV+TD+ RG+D VN+VI+YDMP
Sbjct: 331 FLKEEGHECVCFFGKMHHKKREEVFQGFKDKKARILVSTDIFQRGVDFANVNLVIHYDMP 390
Query: 367 DSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
DS+D YLHR GRAGRF T G+ + FV +A +S++L+Q+
Sbjct: 391 DSSDAYLHRSGRAGRFETAGMVLLFVGTAEESEMLSQI 428
>gi|226469668|emb|CAX76664.1| Helicase at 25E [Schistosoma japonicum]
Length = 231
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 149/220 (67%), Positives = 173/220 (78%), Gaps = 8/220 (3%)
Query: 10 EDELLDYEEEDAQAPDSVATKANGEA-AKKG----YVGIHSSGFRDFLLKPELLRAIVDS 64
E ELLDYE+E+ + T+ NGEA AKKG YV IHSSGFRDF+LKPELLRAIVD
Sbjct: 4 EAELLDYEDEEQETVQE--TRPNGEAVAKKGVKGAYVTIHSSGFRDFILKPELLRAIVDC 61
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEP-NPGQVTALVLCHT 123
GFEHPSEVQHECIPQAIL MDV+CQAKSGMGKTAVFV++TLQQ +P + LVLCHT
Sbjct: 62 GFEHPSEVQHECIPQAILSMDVLCQAKSGMGKTAVFVIATLQQLDPEGEANTSVLVLCHT 121
Query: 124 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARD 183
RELA+QI E+ERFS Y+P IKV VF+GG+ I+ + L IVVGTPGRIL L R
Sbjct: 122 RELAFQISKEYERFSKYMPKIKVGVFFGGMPIRKDIETLTKSPVHIVVGTPGRILDLVRS 181
Query: 184 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDK 223
K L L++V+HFI+DECDKML++LDMRRDVQEIF+MTPH K
Sbjct: 182 KTLKLQHVKHFIIDECDKMLDTLDMRRDVQEIFRMTPHQK 221
>gi|145483885|ref|XP_001427965.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124395048|emb|CAK60567.1| unnamed protein product [Paramecium tetraurelia]
Length = 471
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 168/380 (44%), Positives = 233/380 (61%), Gaps = 19/380 (5%)
Query: 46 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTL 105
S F++F LK ELLRA+ ++GFEHP+ VQ E + A+LG +ICQAK+G GKTAVFVL+ L
Sbjct: 73 SQFKNFGLKEELLRAVKEAGFEHPTRVQAESLTNALLGEQLICQAKAGTGKTAVFVLTVL 132
Query: 106 QQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVN-IKIHKDLLKN 164
+V LV+ HTRELA Q EF R ++ +KV FYGG + ++ ++
Sbjct: 133 NTINTESNKVECLVITHTRELAQQARDEFLRLGKFMKSVKVECFYGGGEPVSVNIQTIET 192
Query: 165 ECPQIVVGTPGRILAL-ARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDK 223
PQIVVGTPGR+ L K L + +++FILDE D M+E L+MR+D+Q+IF +P +K
Sbjct: 193 VKPQIVVGTPGRLKDLICERKALKVDRLKYFILDEADTMIEDLNMRKDIQDIFLKSPQEK 252
Query: 224 QVMMFSATLSKEIRPVCKKFMQDPMEIY--VDDEAKLTLHGLVQHYIKLSELEKNRKLND 281
Q M FSAT ++ R K+F+ D IY +L L L Q+Y+K+ E K L
Sbjct: 253 QFMAFSATFTESSRTSLKRFIADNKHIYEITIKPEQLFLDKLKQYYMKMPEALKFHYLRQ 312
Query: 282 LLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMS------QEERLTRYKGFK 335
+L+ NQ +IFVKS +A L L + S+ G + Q+ R Y+ F+
Sbjct: 313 ILNTCKLNQCIIFVKSSEKADALVTELKKKGEESVRQLYGGNRLGPDHQKMRQKTYEQFR 372
Query: 336 EGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSS- 394
G+ R+LVAT+L+GRGIDI++VN VIN+DMPDS +TYLHRVGRAGR T G+AI+FV S
Sbjct: 373 NGHFRLLVATNLMGRGIDIDKVNYVINFDMPDSLETYLHRVGRAGRQETNGVAISFVKSE 432
Query: 395 --------ASDSDILNQVSK 406
+D ++L Q+ K
Sbjct: 433 EEASDGKKQTDDEVLQQILK 452
>gi|354507651|ref|XP_003515868.1| PREDICTED: spliceosome RNA helicase Ddx39b-like, partial
[Cricetulus griseus]
Length = 205
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 142/203 (69%), Positives = 172/203 (84%), Gaps = 2/203 (0%)
Query: 6 DNEYEDELLDYEEEDAQ-APDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVD 63
+N+ ++ELLDYE+++ + A T+A + KG YV IHSSGFRDFLLKPELLRAIVD
Sbjct: 3 ENDVDNELLDYEDDEVETAAGGDGTEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVD 62
Query: 64 SGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHT 123
GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKT VFVL+TLQQ EP GQV+ LV+CHT
Sbjct: 63 CGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTVVFVLATLQQLEPITGQVSVLVMCHT 122
Query: 124 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARD 183
RELA+QI E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRILALAR+
Sbjct: 123 RELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARN 182
Query: 184 KDLSLKNVRHFILDECDKMLESL 206
K L+LK+++HFILDECDKMLE L
Sbjct: 183 KSLNLKHIKHFILDECDKMLEQL 205
>gi|145548271|ref|XP_001459816.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427643|emb|CAK92419.1| unnamed protein product [Paramecium tetraurelia]
Length = 429
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 168/386 (43%), Positives = 234/386 (60%), Gaps = 19/386 (4%)
Query: 40 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 99
Y + S F++F LK ELLRA+ ++GFEHP+ VQ E + A+ G +ICQAK+G GKTAV
Sbjct: 25 YDNYNVSQFKNFGLKEELLRAVKEAGFEHPTRVQAESLTNALQGEQLICQAKAGTGKTAV 84
Query: 100 FVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVN-IKIH 158
FVL+ L +V LV+ HTRELA Q EF R ++ +IKV FYGG + ++
Sbjct: 85 FVLTVLNTINTESNKVECLVITHTRELAQQARDEFLRLGKFMKNIKVECFYGGGEPVTVN 144
Query: 159 KDLLKNECPQIVVGTPGRILAL-ARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFK 217
++ PQI+VGTPGR+ L K L + +++FILDE D M+E L+MR+D+Q+IF
Sbjct: 145 ISTIETVKPQIIVGTPGRLKDLICERKALKVDRLKYFILDEADTMIEDLNMRKDIQDIFL 204
Query: 218 MTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY--VDDEAKLTLHGLVQHYIKLSELEK 275
+P +KQ M FSAT ++ R KKF+ D IY +L L L Q+Y+K+ E K
Sbjct: 205 RSPQEKQFMAFSATFTESSRTSLKKFIADNKHIYEITIKPEQLFLDKLKQYYMKVPETLK 264
Query: 276 NRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMS------QEERLT 329
L +L+ NQ +IFVKS +A L L + S+ G + Q+ R
Sbjct: 265 FHYLRQILNTCKLNQCIIFVKSSEKADALVAELKKKGEDSVRQLYGGNRLGPDHQKLRQK 324
Query: 330 RYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAI 389
Y+ F+ G+ R+LVAT+L+GRGIDI++VN VIN+DMPDS +TYLHRVGRAGR T G+AI
Sbjct: 325 TYEQFRNGHFRLLVATNLMGRGIDIDKVNYVINFDMPDSLETYLHRVGRAGRQETNGVAI 384
Query: 390 TF---------VSSASDSDILNQVSK 406
+F V +D ++L Q+ K
Sbjct: 385 SFVKFEEEASDVKKHTDDEVLQQILK 410
>gi|159109744|ref|XP_001705135.1| ATP-dependent RNA helicase p47, putative [Giardia lamblia ATCC
50803]
gi|157433215|gb|EDO77461.1| ATP-dependent RNA helicase p47, putative [Giardia lamblia ATCC
50803]
Length = 516
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 165/399 (41%), Positives = 234/399 (58%), Gaps = 10/399 (2%)
Query: 15 DYEEEDAQAPDSVATKANGEAAKKGYVGIHSSG-----FRDFLLKPELLRAIVDSGFEHP 69
D +E A D+ A A+G A ++ G SG F DF L+ E+L+AI+ +GFE P
Sbjct: 93 DTGDELALLADTGAEVASG-ALRQARAGSPRSGALLTRFSDFNLREEVLQAIISNGFESP 151
Query: 70 SEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPN--PGQVTALVLCHTRELA 127
S+VQ IP A+ DVICQAKSG GKTAVFVLS L +P P +V ALVLC+T ELA
Sbjct: 152 SDVQSMAIPPALEHKDVICQAKSGKGKTAVFVLSLLHMIDPQAAPHKVQALVLCNTHELA 211
Query: 128 YQICHEFERFSTYLPDIKVAVF--YGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKD 185
QI EF RF+ LPDIK + GGV + +H LK++ I VGT GR+ L
Sbjct: 212 MQIYKEFTRFAINLPDIKDKILCAIGGVTVSLHVRALKSKDVSIAVGTIGRVSDLVERGA 271
Query: 186 LSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQ 245
L L +++ +LDE D + + D + + + P Q ++F+AT ++ + ++
Sbjct: 272 LDLSFIKYLVLDEFDALFKEEDNFKKIAGLISKMPATHQTLLFTATFTEHSEKFARSILR 331
Query: 246 DPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELN 305
D + D+ +L L GL+Q+Y E +K L D L L F+Q VIF + +SR LN
Sbjct: 332 DGYVAILVDDKQLVLTGLMQYYFNAPEEKKLHILLDCLRLLPFSQAVIFARDISRVTALN 391
Query: 306 KLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDM 365
+ L E +C M ++R ++GFK+ RILV+TD+ RG+D VN+VI+YDM
Sbjct: 392 EFLKEEGHECVCFFGKMHHKKREEVFQGFKDKKARILVSTDIFQRGVDFANVNLVIHYDM 451
Query: 366 PDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
PDS+D YLHR GRAGRF T G+ + FV +A +S++L+Q+
Sbjct: 452 PDSSDAYLHRSGRAGRFETAGMVLLFVGTAEESEMLSQI 490
>gi|27652057|gb|AAO17547.1| putative RNA helicase [Giardia intestinalis]
Length = 454
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 165/399 (41%), Positives = 234/399 (58%), Gaps = 10/399 (2%)
Query: 15 DYEEEDAQAPDSVATKANGEAAKKGYVGIHSSG-----FRDFLLKPELLRAIVDSGFEHP 69
D +E A D+ A A+G A ++ G SG F DF L+ E+L+AI+ +GFE P
Sbjct: 31 DTGDELALLADTGAEVASG-ALRQARAGSPRSGALLTRFSDFNLREEVLQAIISNGFESP 89
Query: 70 SEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPN--PGQVTALVLCHTRELA 127
S+VQ IP A+ DVICQAKSG GKTAVFVLS L +P P +V ALVLC+T ELA
Sbjct: 90 SDVQSMAIPPALEHKDVICQAKSGKGKTAVFVLSLLHMIDPQAAPHKVQALVLCNTHELA 149
Query: 128 YQICHEFERFSTYLPDIKVAVF--YGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKD 185
QI EF RF+ LPDIK + GGV + +H LK++ I VGT GR+ L
Sbjct: 150 MQIYKEFTRFAINLPDIKDKILCAIGGVTVSLHVRALKSKDVSIAVGTIGRVSDLVERGA 209
Query: 186 LSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQ 245
L L +++ +LDE D + + D + + + P Q ++F+AT ++ + ++
Sbjct: 210 LDLSFIKYLVLDEFDALFKEEDNFKKIAGLISKMPATHQTLLFTATFTEHSEKFARSILR 269
Query: 246 DPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELN 305
D + D+ +L L GL+Q+Y E +K L D L L F+Q VIF + +SR LN
Sbjct: 270 DGYVAILVDDKQLVLTGLMQYYFNAPEEKKLHILLDCLRLLPFSQAVIFARDISRVTALN 329
Query: 306 KLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDM 365
+ L E +C M ++R ++GFK+ RILV+TD+ RG+D VN+VI+YDM
Sbjct: 330 EFLKEEGHECVCFFGKMHHKKREEVFQGFKDKKARILVSTDIFQRGVDFANVNLVIHYDM 389
Query: 366 PDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
PDS+D YLHR GRAGRF T G+ + FV +A +S++L+Q+
Sbjct: 390 PDSSDAYLHRSGRAGRFETAGMVLLFVGTAEESEMLSQI 428
>gi|340508110|gb|EGR33893.1| hypothetical protein IMG5_032380 [Ichthyophthirius multifiliis]
Length = 389
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 159/333 (47%), Positives = 216/333 (64%), Gaps = 12/333 (3%)
Query: 10 EDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHP 69
ED + DY+ +D P+ V N + V HSS F DF LK +LLR++ ++GFE P
Sbjct: 5 EDNIPDYDSDDE--PNKVHQPKNDQM-----VANHSS-FNDFNLKEDLLRSVKEAGFERP 56
Query: 70 SEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQ 129
SEVQ+ CIP AI G D++CQAK+G GKTAVFVLS L Q + + LVLCHTRELA+Q
Sbjct: 57 SEVQYNCIPNAIHGTDILCQAKAGTGKTAVFVLSVLNQLAEDTPPYSCLVLCHTRELAFQ 116
Query: 130 ICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKD--LS 187
I +EF+R Y + K +GGV + +LK + P I+V TPGR L+L K+ +
Sbjct: 117 IKNEFKRLGKY-TNFKTRAIFGGVEEQDDIAILKQKKPHILVATPGRCLSLINMKNSVIE 175
Query: 188 LKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDP 247
KNV++F++DECD+++ES+ MR DVQEIF P KQVMMFS T+S E + +C+KFM+D
Sbjct: 176 AKNVKYFVVDECDRVMESIKMRSDVQEIFMKLPLQKQVMMFSGTMSTESKKICRKFMKDQ 235
Query: 248 MEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKL 307
+EI+++D AKL LHGL Q+++KL E +K L L+ L FNQV+IFV V RA L+K
Sbjct: 236 LEIFIEDNAKLVLHGLEQYHLKLEEKQKIPILIQFLNQLSFNQVIIFVNKVERAIYLSKY 295
Query: 308 LV-ECNFPSICIHSGMSQEERLTRYKGFKEGNK 339
L E + I+ +SQ++R Y FKEG K
Sbjct: 296 LQEEKKLENSVIYRTLSQDQRTKVYSEFKEGKK 328
>gi|340500508|gb|EGR27377.1| hypothetical protein IMG5_196470 [Ichthyophthirius multifiliis]
Length = 401
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 168/391 (42%), Positives = 231/391 (59%), Gaps = 14/391 (3%)
Query: 18 EEDAQAPD--SVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHE 75
+E Q P+ + + + + K + I+ S F DF L +LLR+I ++G P EVQ +
Sbjct: 3 KEGIQNPEYETKSIQQEQKILKSDQIVINYSTFNDFNLNEDLLRSIKEAGLITPFEVQQK 62
Query: 76 CIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFE 135
CIP+AI G D++CQAK+G GKTAVFV+S L Q N + LVLCHTRE AY I +EF+
Sbjct: 63 CIPKAIFGTDILCQAKAGTGKTAVFVISVLNQLSDNSPPFSCLVLCHTRESAYYIKNEFK 122
Query: 136 RFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDL-SLKNVRHF 194
R + K +GGV KI LKNE P I+V TPG+ +L + K+L NV+HF
Sbjct: 123 RLGKFTI-FKTETVFGGVQEKIDAVKLKNEQPHILVTTPGKFQSLLKQKELIKTINVKHF 181
Query: 195 ILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDD 254
I+DECDK++E L MR+ V++IF P KQVMMFS T+ E K++Q + ++D
Sbjct: 182 IVDECDKVMECLKMRKVVKKIFMQLPLQKQVMMFSGTICIE-----NKYIQ----VIIED 232
Query: 255 EAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECN-F 313
K L GL Q+Y+K+ E K L L FNQV+IFV RA ++K L+E
Sbjct: 233 NYKQELVGLDQYYLKVDEKLKISMLIQFLTQFSFNQVIIFVNKFERAECVSKYLLEKQKI 292
Query: 314 PSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYL 373
S I ++R Y F +G KR+LVATDL R IER+ +VIN+DMP+ D Y+
Sbjct: 293 ESQVICRTFELDKRNQIYTEFIQGKKRVLVATDLFARSSYIERIKLVINFDMPEKYDDYM 352
Query: 374 HRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
HRVG+A TKG+ I+FVS+ D +L +
Sbjct: 353 HRVGKASTQQTKGMIISFVSTKEDDYVLKDI 383
>gi|308160100|gb|EFO62606.1| ATP-dependent RNA helicase p47, putative [Giardia lamblia P15]
Length = 454
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 165/399 (41%), Positives = 234/399 (58%), Gaps = 10/399 (2%)
Query: 15 DYEEEDAQAPDSVATKANGEAAKKGYVGIHSSG-----FRDFLLKPELLRAIVDSGFEHP 69
D +E A D+ A A+G ++ G SG F DF LK E+L+AI+ +GFE P
Sbjct: 31 DTGDELALLADTGAEVASG-MLRQARAGSPRSGALLTRFSDFNLKEEVLQAIISNGFESP 89
Query: 70 SEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPN--PGQVTALVLCHTRELA 127
S+VQ IP A+ DVICQAKSG GKTAVFVLS L +P P +V ALVLC+T ELA
Sbjct: 90 SDVQSMAIPPALEHKDVICQAKSGKGKTAVFVLSLLHMIDPQAAPHKVQALVLCNTHELA 149
Query: 128 YQICHEFERFSTYLPDIKVAVF--YGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKD 185
QI EF RF+ LPDIK + GGV + +H LK++ I VGT GR+ L
Sbjct: 150 MQIYKEFTRFAINLPDIKDKMLCAIGGVTVSLHVRALKSKDVSIAVGTIGRVSDLVERGA 209
Query: 186 LSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQ 245
L L ++++ +LDE D + + D + + + P Q ++F+AT ++ + ++
Sbjct: 210 LDLSSIKYLVLDEFDALFKEEDNFKKIAGLISKMPATHQTLLFTATFTEHSEKFARSILR 269
Query: 246 DPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELN 305
D + D+ +L L GL+Q+Y E +K L D L L F+Q VIF + +SR LN
Sbjct: 270 DGYVAILVDDKQLVLTGLMQYYFDAPEEKKLHILLDCLRLLPFSQAVIFARDISRVTALN 329
Query: 306 KLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDM 365
+ L E +C M ++R ++GFK+ RILV+TD+ RG+D VN+VI+YDM
Sbjct: 330 EFLKEEGHECVCFFGKMHHKKREEVFQGFKDKKARILVSTDIFQRGVDFANVNLVIHYDM 389
Query: 366 PDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
PDS+D YLHR GRAGRF T G+ + FV +A +S++L+Q+
Sbjct: 390 PDSSDAYLHRSGRAGRFETAGMVLLFVGTAEESEMLSQI 428
>gi|168985558|emb|CAQ10636.1| HLA-B associated transcript 1 [Homo sapiens]
Length = 245
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 137/180 (76%), Positives = 158/180 (87%)
Query: 145 KVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLE 204
KVAVF+GG++IK +++LK CP IVVGTPGRILALAR+K L+LK+++HFILDECDKMLE
Sbjct: 66 KVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLE 125
Query: 205 SLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLV 264
LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIRPVC+KFMQDPMEI+VDDE KLTLHGL
Sbjct: 126 QLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQ 185
Query: 265 QHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQ 324
Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L +LLVE NFP+I IH GM Q
Sbjct: 186 QYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQ 245
>gi|374094672|gb|AEY84721.1| WM6-like RNA helicase, partial [Pandalus platyceros]
Length = 171
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 134/171 (78%), Positives = 150/171 (87%)
Query: 213 QEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSE 272
QEIF+ TPH+KQVMMFSATLSKEIRPVCKKFMQDPME+YVDDEAKLTLHGL QHY+K+ E
Sbjct: 1 QEIFRNTPHEKQVMMFSATLSKEIRPVCKKFMQDPMEVYVDDEAKLTLHGLQQHYVKIKE 60
Query: 273 LEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYK 332
EKNRKL +LLDAL+FNQVVIFVKSV R L +LLVE NFP+I IH MSQEERL+RY+
Sbjct: 61 NEKNRKLFELLDALEFNQVVIFVKSVQRCMALAQLLVEQNFPAIGIHRAMSQEERLSRYQ 120
Query: 333 GFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 383
FK+ KRILVAT+L GRG+DIERVNIV NYDMP+ +DTYLHRV RAGRFG
Sbjct: 121 QFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFG 171
>gi|56758736|gb|AAW27508.1| unknown [Schistosoma japonicum]
Length = 215
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 142/213 (66%), Positives = 166/213 (77%), Gaps = 8/213 (3%)
Query: 10 EDELLDYEEEDAQAPDSVATKANGEA-AKKG----YVGIHSSGFRDFLLKPELLRAIVDS 64
E ELLDYE+E+ + T+ NGEA AKKG YV IHSSGFRDF+LKPELLRAIVD
Sbjct: 4 EAELLDYEDEEQETVQE--TRPNGEAVAKKGVKGAYVTIHSSGFRDFILKPELLRAIVDC 61
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEP-NPGQVTALVLCHT 123
GFEHPSEVQHECIPQAIL MDV+CQAKSGMGKTAVFV++TLQQ +P + LVLCHT
Sbjct: 62 GFEHPSEVQHECIPQAILSMDVLCQAKSGMGKTAVFVIATLQQLDPEGEANTSVLVLCHT 121
Query: 124 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARD 183
RELA+QI E+ERFS Y+P IKV VF+GG+ I+ + L IVVGTPGRIL L R
Sbjct: 122 RELAFQISKEYERFSKYMPKIKVGVFFGGMPIRKDIETLTKSPVHIVVGTPGRILDLVRS 181
Query: 184 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIF 216
K L L++V+HFI+DECDKML++LDMRRDV+E F
Sbjct: 182 KTLKLQHVKHFIIDECDKMLDTLDMRRDVKEYF 214
>gi|366988431|ref|XP_003673982.1| hypothetical protein NCAS_0A10430 [Naumovozyma castellii CBS 4309]
gi|342299845|emb|CCC67601.1| hypothetical protein NCAS_0A10430 [Naumovozyma castellii CBS 4309]
Length = 399
Score = 270 bits (691), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 148/368 (40%), Positives = 223/368 (60%), Gaps = 11/368 (2%)
Query: 45 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLST 104
S F LKP+LLR I GFE PS +Q I + I G D+I QA+SG GKTA F +
Sbjct: 22 SPTFESMSLKPDLLRGIYSYGFETPSSIQSRAITRIISGSDIIAQAQSGTGKTATFAIGM 81
Query: 105 LQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKN 164
LQ + + AL+L TRELA QI Y+ ++K GG K+ KD LK
Sbjct: 82 LQIIDLKKKDLQALILSPTRELAVQINQVVSNLGDYM-NVKSLAMTGG---KMMKDDLKK 137
Query: 165 ECP---QIVVGTPGRILALARDKDLSLKNVRHFILDECDKML-ESLDMRRDVQEIFKMTP 220
Q+V GTPGR+L + + + L+++N++ +LDE D++L ESL ++ + +IF P
Sbjct: 138 VSKSGCQVVSGTPGRVLDMIKRQLLAIRNIQMLVLDEADELLGESLGFKQQIYDIFAKLP 197
Query: 221 HDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKL 279
QV++ SAT+SK+I V KKFM DP++I V + +++L G+ Q+Y+ + + E K L
Sbjct: 198 KSCQVVVVSATMSKDIIEVTKKFMSDPVKILVKQD-EISLEGIKQYYVDVGKEEWKFDTL 256
Query: 280 NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNK 339
D+ D+L Q VIF + + L+ L + NF + +H M QEER F+ G+
Sbjct: 257 CDIYDSLTITQCVIFCNTKKKVDWLSAKLTQSNFAVVSMHGDMKQEERDKVMNDFRTGHS 316
Query: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSD 399
R+L++TD+ RGID+++V++VINYD+P++ + Y+HR+GR+GRFG KG+AI F++S SD
Sbjct: 317 RVLISTDVWARGIDVQQVSLVINYDLPENMENYIHRIGRSGRFGRKGIAINFLTS-SDGS 375
Query: 400 ILNQVSKF 407
+ KF
Sbjct: 376 TFRDIQKF 383
>gi|449304246|gb|EMD00254.1| hypothetical protein BAUCODRAFT_371348 [Baudoinia compniacensis
UAMH 10762]
Length = 523
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 148/347 (42%), Positives = 207/347 (59%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F DF LK ELL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++
Sbjct: 49 FEDFYLKRELLMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLER 108
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
P + AL+L TRELA Q + +L I V V GG +K D+++ NE
Sbjct: 109 INPKLEKTQALILVPTRELALQTSQVCKTLGKHL-GINVMVTTGGTGLK--DDIIRLNEV 165
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
I+VGTPGRIL LA L + F++DE DK+L S + ++++ + P D+QVM
Sbjct: 166 VHIIVGTPGRILDLASKGVADLSAAKTFVMDEADKLL-SPEFTVTIEQLLQFHPADRQVM 224
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K M+DP EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 225 LFSATFPIVVKSFMDKHMRDPHEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFSRL 282
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q+ R + F+ G R LV +D
Sbjct: 283 QINQSIIFCNSTTRVELLAKKITELGYSCFYSHAKMLQQHRNRVFHDFRNGAMRNLVCSD 342
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 343 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLIN 389
>gi|226468128|emb|CAX76291.1| Eukaryotic initiation factor 4A [Schistosoma japonicum]
Length = 392
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 143/348 (41%), Positives = 214/348 (61%), Gaps = 5/348 (1%)
Query: 47 GFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQ 106
GF LK ELLR I G+E PS +Q I ++ G DVI QA+SG GKTA F +S LQ
Sbjct: 20 GFEKLGLKSELLRGIYSFGYEKPSAIQQRAIKPSVEGRDVIAQAQSGTGKTATFAISILQ 79
Query: 107 QTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNEC 166
+ + + ALVL TRELA QI +R +YL +++ GG + L+ +
Sbjct: 80 RIDVSSNTCQALVLVPTRELARQIQTVVQRIGSYL-NVRCHTCIGGTRMSEDVACLQ-QG 137
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
+VVGTPGR++ + L+ N++ F+LDE D+ML ++EI+K P Q+M
Sbjct: 138 QHVVVGTPGRVIDMMNRSILATSNIKIFVLDEADQML-GRGFEPQIKEIYKYLPESAQIM 196
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDA 285
+ SAT+ K++ + + MQDP++I + E +LTL G+ Q YI +S+ E K L DL
Sbjct: 197 LLSATMPKQMLTIARGIMQDPVQILIKKE-ELTLDGIKQFYINVSKEEYKLETLMDLYKV 255
Query: 286 LDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVAT 345
++ +QVVIFV SV +A+ L++ L NF CI+S M QE+R + ++ G RIL++T
Sbjct: 256 MNLSQVVIFVNSVRKASYLSEELANRNFQVSCINSDMEQEKRDRVMEEYRSGRSRILLST 315
Query: 346 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
D++ RGID+++V++V+NYD+P +TY+HR+ R GRFG KG AI F++
Sbjct: 316 DVLARGIDVQQVSLVVNYDLPGDRETYIHRICRGGRFGRKGTAINFIT 363
>gi|401839441|gb|EJT42668.1| FAL1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 399
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 147/366 (40%), Positives = 222/366 (60%), Gaps = 7/366 (1%)
Query: 45 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLST 104
SS F LK +LLR I GFE PS +Q I Q I G DVI QA+SG GKTA F +
Sbjct: 22 SSTFESMNLKDDLLRGIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTIGL 81
Query: 105 LQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIH-KDLLK 163
LQ + + AL+L TRELA QI Y+ ++ GG +K K + K
Sbjct: 82 LQAIDLKRMDLQALILSPTRELASQIGQVVTNLGDYM-NVNAFAMTGGKTLKDDLKKIQK 140
Query: 164 NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML-ESLDMRRDVQEIFKMTPHD 222
N C Q++ GTPGR+L + + + L +NVR ILDE D++L E+L ++ + +IF P +
Sbjct: 141 NGC-QVISGTPGRVLDMIKRQMLQTRNVRMLILDEADELLSETLGFKQQIYDIFTKLPKN 199
Query: 223 KQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL-SELEKNRKLND 281
QV++ SAT++K+I V +KF+ DP++I V + +++L G+ Q+ + + E K L D
Sbjct: 200 CQVVVVSATMNKDILEVTRKFLNDPVKILVKRD-EISLEGIKQYIVNVDKEDWKFDTLCD 258
Query: 282 LLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRI 341
+ D+L Q VIF + + L++ L + NF + +H M QEER F+ G+ R+
Sbjct: 259 IYDSLTITQCVIFCNTKKKVDWLSQRLTQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRV 318
Query: 342 LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDIL 401
L++TD+ RGID+++V++VINYD+P+ + Y+HR+GR+GRFG KG+AI F++ A DS L
Sbjct: 319 LISTDVWARGIDVQQVSLVINYDLPEIIENYIHRIGRSGRFGRKGVAINFITRA-DSTKL 377
Query: 402 NQVSKF 407
++ KF
Sbjct: 378 REIEKF 383
>gi|452978125|gb|EME77889.1| hypothetical protein MYCFIDRAFT_205331 [Pseudocercospora fijiensis
CIRAD86]
Length = 517
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 148/347 (42%), Positives = 207/347 (59%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F DF LK ELL I ++G+E PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++
Sbjct: 49 FEDFYLKRELLMGIYEAGYEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLER 108
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
P ++ AL+L TRELA Q + +L I V V GG ++ D+++ NE
Sbjct: 109 INPKSDKIQALLLVPTRELALQTSQVCKTLGKHL-GINVMVTTGGTGLR--DDIIRLNEA 165
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
IVVGTPGRIL LA L + F++DE DK+L S + ++++ K P D+QVM
Sbjct: 166 VHIVVGTPGRILDLAGKGVADLSEAKTFVMDEADKLL-SPEFTVTIEQLLKFHPKDRQVM 224
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K M DP EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 225 LFSATFPVVVKDFKDKHMTDPHEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFSRL 282
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q+ R + F+ G R LV +D
Sbjct: 283 QINQSIIFCNSTTRVELLAKKITELGYSCFYSHAKMLQQHRNRVFHDFRNGAMRNLVCSD 342
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 343 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLIN 389
>gi|254577069|ref|XP_002494521.1| ZYRO0A03476p [Zygosaccharomyces rouxii]
gi|238937410|emb|CAR25588.1| ZYRO0A03476p [Zygosaccharomyces rouxii]
Length = 399
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 143/358 (39%), Positives = 216/358 (60%), Gaps = 4/358 (1%)
Query: 45 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLST 104
S F LK +LLR I GFE PS +Q I Q I G DVI QA+SG GKTA F +
Sbjct: 22 SPTFEAMNLKDDLLRGIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTIGM 81
Query: 105 LQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKN 164
LQ E + ALVL TRELA Q C YL ++K GG +K +++
Sbjct: 82 LQVLELKRKDLQALVLSPTRELASQSCQVVSNLGDYL-NVKAFALTGGKALKDDLKRIQS 140
Query: 165 ECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML-ESLDMRRDVQEIFKMTPHDK 223
+V GTPGR+L L + + + +NV+ +LDE D++L E+L ++ + +IF P
Sbjct: 141 SGCHVVSGTPGRVLDLIKRQVVQTRNVQVLVLDEADELLSETLGFKQQIYDIFARLPPGC 200
Query: 224 QVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDL 282
QV++ SAT+S++I V KKFM DP++I V + +++L G+ Q+Y+ +S+ E K L DL
Sbjct: 201 QVVVVSATMSRDILEVTKKFMSDPVKILVKRD-EISLEGISQYYVDVSKEEWKFDTLCDL 259
Query: 283 LDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRIL 342
D+L Q VIF + + L+K L++ NF + +H M QE+R F+ G+ R+L
Sbjct: 260 YDSLTITQCVIFCNTRKKVDWLSKKLIQSNFAVVSMHGDMKQEDRDKVMNDFRTGHSRVL 319
Query: 343 VATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDI 400
++TD+ RGID++++++VINYDMP+ + Y+HR+GR+GRFG KG+A+ F++ S +
Sbjct: 320 ISTDVWARGIDVQQISLVINYDMPEIMENYIHRIGRSGRFGRKGVAVNFITREDSSKL 377
>gi|410079649|ref|XP_003957405.1| hypothetical protein KAFR_0E01160 [Kazachstania africana CBS 2517]
gi|372463991|emb|CCF58270.1| hypothetical protein KAFR_0E01160 [Kazachstania africana CBS 2517]
Length = 405
Score = 264 bits (675), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 147/370 (39%), Positives = 222/370 (60%), Gaps = 9/370 (2%)
Query: 45 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLST 104
S+ F L P LL+ I +GFE PS +Q I Q I G DVI QA+SG GKTA F +
Sbjct: 22 SASFESMQLNPLLLQGIYSNGFEAPSAIQSRAITQIISGRDVIAQAQSGTGKTATFTIGM 81
Query: 105 LQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKD---- 160
LQ ++ L+L TRELA QI YL +AV G + K+
Sbjct: 82 LQVCNFKSSELQCLILSPTRELASQINQVVCNIGDYLNVKSMAVVGGKTSASSSKNKNDL 141
Query: 161 -LLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML-ESLDMRRDVQEIFKM 218
LL+N IV GTPGR+L L + + ++ K V+ +LDE D++L ESL ++ + +IF
Sbjct: 142 NLLRNNKCHIVSGTPGRVLDLIKRQVINTKKVKILVLDEADELLAESLGFKQQIYDIFTK 201
Query: 219 TPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNR 277
P QV++ SAT++K+I V KKF+ DP++I V + +++L G+ Q+++ + + E K
Sbjct: 202 LPKTCQVVVVSATMNKDIIEVTKKFLNDPVKILVKQD-QISLEGIKQYHVNVDKEEWKFD 260
Query: 278 KLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEG 337
L DL D+L NQ VIF + + L+ L++ NF + +H M QEER F+ G
Sbjct: 261 TLCDLYDSLTINQCVIFCNTKKKVDWLSSKLLQANFSVVSMHGDMKQEERDKIMNDFRSG 320
Query: 338 NKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASD 397
+ R+L++TD+ RGID+++V++VINYD+P++ + Y+HR+GR+GRFG KG+AI FV+ D
Sbjct: 321 HSRVLISTDVWARGIDVQQVSLVINYDLPENMENYIHRIGRSGRFGRKGVAINFVTK-DD 379
Query: 398 SDILNQVSKF 407
+L Q+ +F
Sbjct: 380 VKLLKQIERF 389
>gi|398313025|emb|CCI88202.1| ATP-dependent RNA helicase, partial [Saccharomyces eubayanus]
Length = 393
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 148/371 (39%), Positives = 224/371 (60%), Gaps = 7/371 (1%)
Query: 45 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLST 104
+S F LK +LLR I GFE PS +Q I Q I G DVI QA+SG GKTA F +
Sbjct: 22 TSTFESMDLKEDLLRGIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTIGL 81
Query: 105 LQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIH-KDLLK 163
LQ + + AL+L TRELA QI Y+ ++ GG +K K L K
Sbjct: 82 LQAIDLRKKDLQALILSPTRELANQIGQVVTNLGDYM-NVNAFAMTGGKTLKDDLKKLQK 140
Query: 164 NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML-ESLDMRRDVQEIFKMTPHD 222
N C Q+V GTPGR+L + + + L +NV+ ILDE D++L E+L ++ + +IF P +
Sbjct: 141 NGC-QVVSGTPGRVLDMIKRQMLQTRNVQVLILDEADELLSETLGFKQQIYDIFAKLPKN 199
Query: 223 KQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL-SELEKNRKLND 281
QV++ SAT++K+I V +KFM DP++I V + +++L G+ Q+ + + E K L D
Sbjct: 200 CQVVVVSATMNKDILEVTRKFMNDPVKILVKRD-EISLEGIKQYVVNVDKEDWKFDTLCD 258
Query: 282 LLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRI 341
+ D+L Q VIF + + L++ L + NF + +H M QEER F+ G+ R+
Sbjct: 259 IYDSLTITQCVIFCNTKKKVDWLSQRLTQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRV 318
Query: 342 LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDIL 401
L++TD+ RGID+++V++VINYD+P+ + Y+HR+GR+GRFG KG+AI F++ A DS L
Sbjct: 319 LISTDVWARGIDVQQVSLVINYDLPEIIENYIHRIGRSGRFGRKGVAINFITKA-DSAKL 377
Query: 402 NQVSKFMFLLI 412
++ +F + I
Sbjct: 378 REIEQFYVIKI 388
>gi|452837825|gb|EME39766.1| hypothetical protein DOTSEDRAFT_74612 [Dothistroma septosporum
NZE10]
Length = 518
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 148/347 (42%), Positives = 207/347 (59%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F +F LK ELL I ++GFE PS +Q E IP A+ G DV+ +AK+G GKTA FV+ TL++
Sbjct: 48 FEEFYLKRELLMGIYEAGFEKPSPIQEETIPVALSGRDVLARAKNGTGKTAAFVIPTLER 107
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
P ++ AL+L TRELA Q + +L + V V GG ++ D+++ NE
Sbjct: 108 INPKSDKIQALLLVPTRELALQTSQVCKTLGKHL-GVNVMVTTGGTGLR--DDIVRLNEA 164
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
IVVGTPGRIL LA L + F++DE DK+L S + ++++ K P D+QVM
Sbjct: 165 VHIVVGTPGRILDLAGKGVADLSEAKTFVMDEADKLL-SPEFTVTIEQLLKFHPKDRQVM 223
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K M DP EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 224 LFSATFPVVVKDFKDKHMNDPHEINLMDE--LTLRGITQYYAFVDEKQKVHCLNTLFSRL 281
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q+ R + F+ G R LV +D
Sbjct: 282 QINQSIIFCNSTTRVELLAKKITELGYSCFYSHAKMLQQHRNRVFHDFRNGAMRNLVCSD 341
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 342 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLIN 388
>gi|56759172|gb|AAW27726.1| unknown [Schistosoma japonicum]
Length = 233
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 134/203 (66%), Positives = 157/203 (77%), Gaps = 8/203 (3%)
Query: 10 EDELLDYEEEDAQAPDSVATKANGEA-AKKG----YVGIHSSGFRDFLLKPELLRAIVDS 64
E ELLDYE+E+ + T+ NGEA AKKG YV IHSSGFRDF+LKPELLRAIVD
Sbjct: 4 EAELLDYEDEEQETVQE--TRPNGEAVAKKGVKGAYVTIHSSGFRDFILKPELLRAIVDC 61
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEP-NPGQVTALVLCHT 123
GFEHPSEVQHECIPQAIL MDV+CQAKSGMGKTAVFV++TLQQ +P + LVLCHT
Sbjct: 62 GFEHPSEVQHECIPQAILSMDVLCQAKSGMGKTAVFVIATLQQLDPEGEANTSVLVLCHT 121
Query: 124 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARD 183
RELA+QI E+ERFS Y+P IKV VF+GG+ I+ + L IVVGTPGRIL L R
Sbjct: 122 RELAFQISKEYERFSKYMPKIKVGVFFGGMPIRKDIETLTKSPVHIVVGTPGRILDLVRS 181
Query: 184 KDLSLKNVRHFILDECDKMLESL 206
K L L++V+HFI+DECDKML++L
Sbjct: 182 KTLKLQHVKHFIIDECDKMLDTL 204
>gi|156848475|ref|XP_001647119.1| hypothetical protein Kpol_1036p3 [Vanderwaltozyma polyspora DSM
70294]
gi|160385736|sp|A7TEF4.1|FAL1_VANPO RecName: Full=ATP-dependent RNA helicase FAL1
gi|156117803|gb|EDO19261.1| hypothetical protein Kpol_1036p3 [Vanderwaltozyma polyspora DSM
70294]
Length = 399
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 146/365 (40%), Positives = 219/365 (60%), Gaps = 5/365 (1%)
Query: 45 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLST 104
S F LK +LLR I GFE PS +Q I Q I G DVI QA+SG GKTA F +
Sbjct: 22 SPTFESMNLKDDLLRGIYGYGFEAPSAIQSRAITQIISGTDVIAQAQSGTGKTATFTIGM 81
Query: 105 LQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKN 164
LQ + + ALVL TRELA QI Y+ +++ GG +K + ++
Sbjct: 82 LQAIDLKRKDLQALVLSPTRELASQINQVVSNLGDYM-NVQSYAMTGGKTMKDDLNRMQK 140
Query: 165 ECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML-ESLDMRRDVQEIFKMTPHDK 223
Q+V GTPGR+L + + L+ +NV+ ILDE D++L ESL ++ + +IF P
Sbjct: 141 NGCQVVSGTPGRVLDMFKRHLLNTRNVQMLILDEADELLGESLGFKQQIYDIFTKLPAAC 200
Query: 224 QVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL-SELEKNRKLNDL 282
QV++ SAT+SK+I V KKFM DP++I V + +++L G+ Q+Y+ + E K L DL
Sbjct: 201 QVVVVSATMSKDILEVTKKFMSDPVKILVKRD-EISLEGIKQYYVNVEKEDWKFDTLCDL 259
Query: 283 LDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRIL 342
D+L Q VIF + + L+ L + NF + +H M QE+R F+ G+ R+L
Sbjct: 260 YDSLTITQCVIFCNTKKKVDWLSAKLTQSNFAVVSMHGDMKQEDRNKVMSDFRSGHSRVL 319
Query: 343 VATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILN 402
++TD+ RGID+++V++VINYD+P+ + Y+HR+GR+GRFG KG+AI F++S SD +
Sbjct: 320 ISTDVWARGIDVQQVSLVINYDIPEIMENYIHRIGRSGRFGRKGVAINFITS-SDLSKMK 378
Query: 403 QVSKF 407
++ K+
Sbjct: 379 EIEKY 383
>gi|453081014|gb|EMF09064.1| ATP-dependent RNA helicase DHH1 [Mycosphaerella populorum SO2202]
Length = 519
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 156/394 (39%), Positives = 221/394 (56%), Gaps = 13/394 (3%)
Query: 1 MGETRDNEYEDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRA 60
+G+T N+ E D+ P + A KG F +F LK ELL
Sbjct: 9 LGQTTLNDAETVGGDWRSGLKAPPKDGRQQTEDVTATKGL------DFEEFYLKRELLMG 62
Query: 61 IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVL 120
I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++ P ++ AL+L
Sbjct: 63 IYEAGFEKPSPIQEETIPVALSGRDILARAKNGTGKTAAFVIPTLERINPKVDKIQALLL 122
Query: 121 CHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILA 179
TRELA Q + +L I V V GG ++ D+++ NE IVVGTPGRIL
Sbjct: 123 VPTRELALQTSQVCKTLGKHL-GINVMVTTGGTGLR--DDIIRLNEPVHIVVGTPGRILD 179
Query: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
LA L + F++DE DK+L S + ++++ K P D+QVM+FSAT ++
Sbjct: 180 LAGKGVADLSEAKTFVMDEADKLL-SPEFTVTIEQLLKFHPKDRQVMLFSATFPVVVKEF 238
Query: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 299
+ M DP EI + DE LTL G+ Q+Y + E +K LN L L NQ +IF S +
Sbjct: 239 KDRHMNDPHEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFSRLQINQSIIFCNSTT 296
Query: 300 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNI 359
R L K + E + H+ M Q+ R + F+ G R LV +DL+ RGIDI+ VN+
Sbjct: 297 RVELLAKKITELGYSCFYSHAKMLQQHRNRVFHDFRNGAMRNLVCSDLLTRGIDIQAVNV 356
Query: 360 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 357 VINFDFPKNAETYLHRIGRSGRFGHLGLAINLIN 390
>gi|398313027|emb|CCI88203.1| ATP-dependent RNA helicase, partial [Saccharomyces uvarum]
Length = 392
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 147/371 (39%), Positives = 224/371 (60%), Gaps = 7/371 (1%)
Query: 45 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLST 104
+S F LK +LLR I GFE PS +Q I Q I G DVI QA+SG GKTA F +
Sbjct: 15 TSTFESMDLKEDLLRGIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTIGL 74
Query: 105 LQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIH-KDLLK 163
LQ + + AL+L TRELA QI Y+ ++ GG +K K L K
Sbjct: 75 LQAIDLKKKDLQALILSPTRELANQIGQVVTNLGDYM-NVNAFAMTGGKTLKDDLKKLQK 133
Query: 164 NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML-ESLDMRRDVQEIFKMTPHD 222
N C Q+V GTPGR+L + + + L +NV+ ILDE D++L E+L ++ + +IF P +
Sbjct: 134 NGC-QVVSGTPGRVLDMIKRQMLQTRNVQVLILDEADELLSETLGFKQQIYDIFAKLPKN 192
Query: 223 KQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL-SELEKNRKLND 281
QV++ SAT++K+I V +KFM DP++I V + +++L G+ Q+ + + E K L D
Sbjct: 193 CQVVVVSATMNKDILEVTRKFMNDPVKILVKRD-EISLEGIKQYVVNVDKEDWKFDTLCD 251
Query: 282 LLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRI 341
+ D+L Q VIF + + L++ L + NF + +H M QEER F+ G+ R+
Sbjct: 252 IYDSLTITQCVIFCNTKKKVDWLSQRLTQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRV 311
Query: 342 LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDIL 401
L++TD+ RGID+++V++VINYD+P+ + Y+HR+GR+GRFG KG+AI F++ +DS L
Sbjct: 312 LISTDVWARGIDVQQVSLVINYDLPEIIENYIHRIGRSGRFGRKGVAINFITK-TDSAKL 370
Query: 402 NQVSKFMFLLI 412
++ +F + I
Sbjct: 371 REIEQFYVIKI 381
>gi|398313029|emb|CCI88204.1| ATP-dependent RNA helicase, partial [Saccharomyces bayanus]
Length = 390
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 147/371 (39%), Positives = 224/371 (60%), Gaps = 7/371 (1%)
Query: 45 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLST 104
+S F LK +LLR I GFE PS +Q I Q I G DVI QA+SG GKTA F +
Sbjct: 13 TSTFESMDLKEDLLRGIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTIGL 72
Query: 105 LQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIH-KDLLK 163
LQ + + AL+L TRELA QI Y+ ++ GG +K K L K
Sbjct: 73 LQAIDLKKKDLQALILSPTRELANQIGQVVTNLGDYM-NVNAFAMTGGKTLKDDLKKLQK 131
Query: 164 NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML-ESLDMRRDVQEIFKMTPHD 222
N C Q+V GTPGR+L + + + L +NV+ ILDE D++L E+L ++ + +IF P +
Sbjct: 132 NGC-QVVSGTPGRVLDMIKRQMLQTRNVQVLILDEADELLSETLGFKQQIYDIFAKLPKN 190
Query: 223 KQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL-SELEKNRKLND 281
QV++ SAT++K+I V +KFM DP++I V + +++L G+ Q+ + + E K L D
Sbjct: 191 CQVVVVSATMNKDILEVTRKFMNDPVKILVKRD-EISLEGIKQYVVNVDKEDWKFDTLCD 249
Query: 282 LLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRI 341
+ D+L Q VIF + + L++ L + NF + +H M QEER F+ G+ R+
Sbjct: 250 IYDSLTITQCVIFCNTKKKVDWLSQRLTQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRV 309
Query: 342 LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDIL 401
L++TD+ RGID+++V++VINYD+P+ + Y+HR+GR+GRFG KG+AI F++ +DS L
Sbjct: 310 LISTDVWARGIDVQQVSLVINYDLPEIIENYIHRIGRSGRFGRKGVAINFITK-TDSAKL 368
Query: 402 NQVSKFMFLLI 412
++ +F + I
Sbjct: 369 REIEQFYVIKI 379
>gi|365981527|ref|XP_003667597.1| hypothetical protein NDAI_0A01960 [Naumovozyma dairenensis CBS 421]
gi|343766363|emb|CCD22354.1| hypothetical protein NDAI_0A01960 [Naumovozyma dairenensis CBS 421]
Length = 534
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 153/393 (38%), Positives = 222/393 (56%), Gaps = 22/393 (5%)
Query: 3 ETRDNEYEDEL-LDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAI 61
ET ++++ L + ++ Q D + TK N F DF LK ELL I
Sbjct: 7 ETNPEDWKNSLNIPKKDTRPQTEDVLNTKGNT--------------FEDFFLKRELLMGI 52
Query: 62 VDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLC 121
++GFE PS +Q E IP AI G D++ +AK+G GKTA FV+ TL++ +PN ++ AL++
Sbjct: 53 FEAGFEKPSPIQEESIPIAITGRDILARAKNGTGKTAAFVIPTLERIKPNLNKIQALIMV 112
Query: 122 HTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILAL 180
TRELA Q + I V GG N++ D+L+ NE ++VGTPGR+L L
Sbjct: 113 PTRELALQTSQVVRTLGKHC-GISCMVTTGGTNLR--DDILRLNETVHVLVGTPGRVLDL 169
Query: 181 ARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
A K L + FI+DE DKML S D + +++I P Q ++FSAT ++
Sbjct: 170 ASRKVADLSDCSLFIMDEADKML-SRDFKTIIEQILIFLPKKHQSLLFSATFPLTVKEFM 228
Query: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSR 300
K + +P EI + DE LTL G+ Q Y + E +K LN L L NQ +IF S +R
Sbjct: 229 VKHLNNPYEINLMDE--LTLKGITQFYAFVEERQKLHCLNTLFSKLQINQAIIFCNSTNR 286
Query: 301 AAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIV 360
L K + + + H+ M Q+ER + F++G R LV +DL+ RGIDI+ VN+V
Sbjct: 287 VELLAKKITDLGYSCYYSHARMKQQERNRVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVV 346
Query: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
IN+D P +++TYLHR+GR+GRFG GLAI ++
Sbjct: 347 INFDFPKTSETYLHRIGRSGRFGHLGLAINLIN 379
>gi|448080277|ref|XP_004194585.1| Piso0_005086 [Millerozyma farinosa CBS 7064]
gi|359376007|emb|CCE86589.1| Piso0_005086 [Millerozyma farinosa CBS 7064]
Length = 539
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 145/347 (41%), Positives = 209/347 (60%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F +F LK ELL I ++GFE PS VQ E IP A+ G D++ +AK+G GKTA FV+ LQQ
Sbjct: 32 FEEFNLKRELLMGIFEAGFEKPSPVQEESIPMALAGRDILARAKNGTGKTASFVIPALQQ 91
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
T+P ++ AL+L TRELA Q H +L ++ V GG +++ D+++ N+
Sbjct: 92 TKPKLNKIQALILVPTRELALQTSHVVRTLGKHL-GVECMVTTGGTSLR--DDVMRLNDP 148
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
I+VGTPGR+L LA K L FI+DE DKML S + +R +++I P ++Q +
Sbjct: 149 VHILVGTPGRVLDLASRKIADLSECPLFIMDEADKML-SREFKRIIEQILTFFPANRQSL 207
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ + + P EI + DE LTL G+ Q Y + E +K LN L L
Sbjct: 208 LFSATFPLAVKSFMDQHLTKPYEINLMDE--LTLRGISQFYAFVEERQKLHCLNTLFSKL 265
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + + + H+ M Q+ R + F++G R+LV +D
Sbjct: 266 QINQAIIFCNSTNRVELLAKKITDLGYSCYYSHAKMPQQARNKVFHQFRQGKVRVLVCSD 325
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI +S
Sbjct: 326 LLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLMS 372
>gi|452825346|gb|EME32343.1| ATP-dependent RNA helicase DEAD [Galdieria sulphuraria]
Length = 412
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 151/408 (37%), Positives = 232/408 (56%), Gaps = 8/408 (1%)
Query: 17 EEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHEC 76
E D DS A K N + + V ++ + F D L+ ELLR I GFE PSE+Q
Sbjct: 12 ERNDKATVDSEAPKGNKWESSE--VQVYET-FDDMNLRDELLRGIFAHGFEKPSEIQKRG 68
Query: 77 IPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFER 136
I + G D I QA+SGMGKTA FV+ LQ + + +V AL+L TRELA QI
Sbjct: 69 ILPIVKGRDTIAQAQSGMGKTATFVVGILQNVDTSFQKVQALILAPTRELAQQIQRVVNE 128
Query: 137 FSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFIL 196
++ ++ GG + + P +VVGTPGR+ + K K ++ F+L
Sbjct: 129 LGDFMS-VRCHACIGGTRVMDDIRTFQENVPHVVVGTPGRVFDMMNRKVFETKYIKSFVL 187
Query: 197 DECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEA 256
DE D+ML S + + ++F+ P + QV +FSAT+ +++ + +KFM+DP+ I V E
Sbjct: 188 DEADEML-SRGFKEQIYDVFQYMPANCQVGLFSATMPQDVLEMTEKFMRDPIVILVKKE- 245
Query: 257 KLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPS 315
+LTL G+ Q+YI + + E K L DL + L Q +I+V + + L + L E +F
Sbjct: 246 ELTLEGIKQYYIAVEKEEYKFETLCDLYETLTVTQAIIYVNTRRKVDWLTQKLRERDFTV 305
Query: 316 ICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHR 375
C+H + Q+ER + F+ G+ R+LV TDL+ RGID+++V++VINYD+P + + Y+HR
Sbjct: 306 SCLHGDIDQKERDLIMREFRTGSSRVLVTTDLLARGIDVQQVSLVINYDLPTNRENYIHR 365
Query: 376 VGRAGRFGTKGLAITFVSSASDSDILNQVSKFMFLLIGSFQCLVLGSF 423
+GR+GRFG KG+AI F+++ D + ++ +F I V GS
Sbjct: 366 IGRSGRFGRKGVAINFITN-EDFQTMKEIEEFYNTKIVDMPVDVAGSL 412
>gi|207347082|gb|EDZ73384.1| YDL160Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256273565|gb|EEU08498.1| Dhh1p [Saccharomyces cerevisiae JAY291]
gi|259145084|emb|CAY78348.1| Dhh1p [Saccharomyces cerevisiae EC1118]
gi|323334302|gb|EGA75683.1| Dhh1p [Saccharomyces cerevisiae AWRI796]
Length = 506
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 145/347 (41%), Positives = 205/347 (59%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F DF LK ELL I ++GFE PS +Q E IP AI G D++ +AK+G GKTA FV+ TL++
Sbjct: 48 FEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEK 107
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
+P ++ AL++ TRELA Q + I V GG N++ D+L+ NE
Sbjct: 108 VKPKLNKIQALIMVPTRELALQTSQVVRTLGKHC-GISCMVTTGGTNLR--DDILRLNET 164
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
I+VGTPGR+L LA K L + FI+DE DKML S D + +++I P Q +
Sbjct: 165 VHILVGTPGRVLDLASRKVADLSDCSLFIMDEADKML-SRDFKTIIEQILSFLPSTHQSL 223
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K + P EI + +E LTL G+ Q+Y + E +K LN L L
Sbjct: 224 LFSATFPLTVKEFMVKHLHKPYEINLMEE--LTLKGITQYYAFVEERQKLHCLNTLFSKL 281
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + + + H+ M Q+ER + F++G R LV +D
Sbjct: 282 QINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQERNKVFHEFRQGKVRTLVCSD 341
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 342 LLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLIN 388
>gi|61679843|pdb|1S2M|A Chain A, Crystal Structure Of The Dead Box Protein Dhh1p
Length = 400
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 145/347 (41%), Positives = 205/347 (59%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F DF LK ELL I ++GFE PS +Q E IP AI G D++ +AK+G GKTA FV+ TL++
Sbjct: 23 FEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEK 82
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
+P ++ AL++ TRELA Q + I V GG N++ D+L+ NE
Sbjct: 83 VKPKLNKIQALIMVPTRELALQTSQVVRTLGKHC-GISCMVTTGGTNLR--DDILRLNET 139
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
I+VGTPGR+L LA K L + FI+DE DKML S D + +++I P Q +
Sbjct: 140 VHILVGTPGRVLDLASRKVADLSDCSLFIMDEADKML-SRDFKTIIEQILSFLPPTHQSL 198
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K + P EI + +E LTL G+ Q+Y + E +K LN L L
Sbjct: 199 LFSATFPLTVKEFMVKHLHKPYEINLMEE--LTLKGITQYYAFVEERQKLHCLNTLFSKL 256
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + + + H+ M Q+ER + F++G R LV +D
Sbjct: 257 QINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQERNKVFHEFRQGKVRTLVCSD 316
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 317 LLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLIN 363
>gi|401841299|gb|EJT43708.1| DHH1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 507
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 145/347 (41%), Positives = 205/347 (59%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F DF LK ELL I ++GFE PS +Q E IP AI G D++ +AK+G GKTA FV+ TL++
Sbjct: 48 FEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLER 107
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
+P ++ AL++ TRELA Q + I V GG N++ D+L+ NE
Sbjct: 108 VKPKLNKIQALIMVPTRELALQTSQVVRTLGKHC-GISCMVTTGGTNLR--DDILRLNET 164
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
I+VGTPGR+L LA K L + FI+DE DKML S D + +++I P Q +
Sbjct: 165 VHILVGTPGRVLDLASRKVADLSDCSLFIMDEADKML-SRDFKTIIEQILSFLPTTHQSL 223
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K + P EI + +E LTL G+ Q+Y + E +K LN L L
Sbjct: 224 LFSATFPLTVKEFMVKHLHKPYEINLMEE--LTLKGITQYYAFVEERQKLHCLNTLFSKL 281
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + + + H+ M Q+ER + F++G R LV +D
Sbjct: 282 QINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQERNKVFHEFRQGKVRTLVCSD 341
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 342 LLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLIN 388
>gi|398365053|ref|NP_010304.3| Fal1p [Saccharomyces cerevisiae S288c]
gi|2500524|sp|Q12099.1|FAL1_YEAST RecName: Full=ATP-dependent RNA helicase FAL1; AltName:
Full=Translation initiation factor four A-like protein 1
gi|160385737|sp|A6ZXY5.1|FAL1_YEAS7 RecName: Full=ATP-dependent RNA helicase FAL1; AltName:
Full=Translation initiation factor four A-like protein 1
gi|840874|emb|CAA89846.1| unknown [Saccharomyces cerevisiae]
gi|1216228|emb|CAA65213.1| orf:PZC399 [Saccharomyces cerevisiae]
gi|1431450|emb|CAA98842.1| FAL1 [Saccharomyces cerevisiae]
gi|51830220|gb|AAU09684.1| YDR021W [Saccharomyces cerevisiae]
gi|151942009|gb|EDN60365.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|256273263|gb|EEU08206.1| Fal1p [Saccharomyces cerevisiae JAY291]
gi|285811043|tpg|DAA11867.1| TPA: Fal1p [Saccharomyces cerevisiae S288c]
gi|392300135|gb|EIW11226.1| Fal1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 399
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 145/366 (39%), Positives = 223/366 (60%), Gaps = 7/366 (1%)
Query: 45 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLST 104
SS F LK +LLR I GFE PS +Q I Q I G DVI QA+SG GKTA F +
Sbjct: 22 SSTFESMNLKDDLLRGIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTIGL 81
Query: 105 LQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIH-KDLLK 163
LQ + + AL+L TRELA QI + Y+ ++ GG +K K + K
Sbjct: 82 LQAIDLRKKDLQALILSPTRELASQIGQVVKNLGDYM-NVNAFAITGGKTLKDDLKKMQK 140
Query: 164 NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML-ESLDMRRDVQEIFKMTPHD 222
+ C Q V GTPGR+L + + + L +NV+ +LDE D++L E+L ++ + +IF P +
Sbjct: 141 HGC-QAVSGTPGRVLDMIKKQMLQTRNVQMLVLDEADELLSETLGFKQQIYDIFAKLPKN 199
Query: 223 KQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLND 281
QV++ SAT++K+I V +KFM DP++I V + +++L G+ Q+ + + + E K L D
Sbjct: 200 CQVVVVSATMNKDILEVTRKFMNDPVKILVKRD-EISLEGIKQYVVNVDKEEWKFDTLCD 258
Query: 282 LLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRI 341
+ D+L Q VIF + + L++ L++ NF + +H M QEER F+ G+ R+
Sbjct: 259 IYDSLTITQCVIFCNTKKKVDWLSQRLIQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRV 318
Query: 342 LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDIL 401
L++TD+ RGID+++V++VINYD+P+ + Y+HR+GR+GRFG KG+AI F++ A D L
Sbjct: 319 LISTDVWARGIDVQQVSLVINYDLPEIIENYIHRIGRSGRFGRKGVAINFITKA-DLAKL 377
Query: 402 NQVSKF 407
++ KF
Sbjct: 378 REIEKF 383
>gi|403214986|emb|CCK69486.1| hypothetical protein KNAG_0C03820 [Kazachstania naganishii CBS
8797]
Length = 513
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 152/396 (38%), Positives = 223/396 (56%), Gaps = 23/396 (5%)
Query: 1 MGETRDNEYEDELLDYEEEDA--QAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELL 58
M T +N+ L+ ++D+ Q D + TK N F DF LK ELL
Sbjct: 1 MPSTMENQDWKSQLNIPKKDSRPQTDDVLKTKGNT--------------FEDFYLKRELL 46
Query: 59 RAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTAL 118
I ++GFE PS +Q E IP AI G D++ +AK+G GKTA FV+ TL++ +P ++ AL
Sbjct: 47 MGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQAL 106
Query: 119 VLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRI 177
++ TRELA Q + + V GG N++ D+L+ N+ I+VGTPGR+
Sbjct: 107 IMVPTRELALQTSQVVRSLGKHC-GVSCMVTTGGTNLR--DDILRLNDTIHILVGTPGRV 163
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
L LA K L F++DE DKML S D + +++I P + Q ++FSAT ++
Sbjct: 164 LDLASRKIADLSECGLFVMDEADKML-SRDFKTIIEQILAFLPKNHQSLLFSATFPLTVK 222
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 297
+K + P EI + +E LTL G+ Q+Y + E +K LN L L NQ +IF S
Sbjct: 223 EFMEKHLNKPYEINLMEE--LTLKGITQYYAFVEERQKLHCLNTLFSKLQINQAIIFCNS 280
Query: 298 VSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERV 357
+R L K + + + H+ M Q+ER + F++G R LV +DL+ RGIDI+ V
Sbjct: 281 TNRVELLAKKITDLGYSCYYSHARMKQQERNRVFHEFRQGKVRTLVCSDLLTRGIDIQAV 340
Query: 358 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
N+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 341 NVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLIN 376
>gi|401626458|gb|EJS44404.1| dhh1p [Saccharomyces arboricola H-6]
Length = 507
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 145/347 (41%), Positives = 205/347 (59%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F DF LK ELL I ++GFE PS +Q E IP AI G D++ +AK+G GKTA FV+ TL++
Sbjct: 48 FEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEK 107
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
+P ++ AL++ TRELA Q + I V GG N++ D+L+ NE
Sbjct: 108 VKPKLNKIQALIMVPTRELALQTSQVVRTLGKHC-GISCMVTTGGTNLR--DDILRLNET 164
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
I+VGTPGR+L LA K L + FI+DE DKML S D + +++I P Q +
Sbjct: 165 VHILVGTPGRVLDLASRKVADLSDCSLFIMDEADKML-SRDFKTIIEQILSFLPSTHQSL 223
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K + P EI + +E LTL G+ Q+Y + E +K LN L L
Sbjct: 224 LFSATFPLTVKEFMVKHLHKPYEINLMEE--LTLKGITQYYAFVEERQKLHCLNTLFSKL 281
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + + + H+ M Q+ER + F++G R LV +D
Sbjct: 282 QINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQERNKVFHEFRQGKVRTLVCSD 341
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 342 LLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLIN 388
>gi|365982301|ref|XP_003667984.1| hypothetical protein NDAI_0A05860 [Naumovozyma dairenensis CBS 421]
gi|343766750|emb|CCD22741.1| hypothetical protein NDAI_0A05860 [Naumovozyma dairenensis CBS 421]
Length = 399
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 148/387 (38%), Positives = 229/387 (59%), Gaps = 10/387 (2%)
Query: 29 TKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVIC 88
TK + +KK V SS F LKP LL+ I GFE PS +Q I + I G DVI
Sbjct: 9 TKLKFKTSKKLKV---SSTFESMSLKPNLLKGIYSYGFESPSSIQSRAITRIIAGNDVIA 65
Query: 89 QAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAV 148
QA+SG GKTA F + LQ + + Q+ L+L TRELA QI Y+ ++K
Sbjct: 66 QAQSGTGKTATFTIGMLQIIDSDKKQLQGLILSPTRELAVQINQVVGNLGDYM-NVKSMA 124
Query: 149 FYGGVNIKIH-KDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML-ESL 206
GG +K K + KN C ++ GTPGRIL + + + L+++N++ +LDE D++L E L
Sbjct: 125 MIGGKMMKEDLKKINKNSC-HVISGTPGRILDMIKRQLLNVRNIQILVLDEADELLSEIL 183
Query: 207 DMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQH 266
++ + +IF P QV++ SAT+ K I + KKFM DP++I V + +++L G+ Q+
Sbjct: 184 GFKQQIYDIFAKLPKSCQVVVVSATMDKNILEITKKFMNDPVKILVKQD-EISLEGIKQY 242
Query: 267 YIKL-SELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQE 325
+ + E K L D+ D+L Q VIF + + L+ L + NF + +H M QE
Sbjct: 243 IVNVDKEDWKFDTLCDIYDSLTITQCVIFCNTKKKVDWLSAKLAQANFAVVSMHGDMKQE 302
Query: 326 ERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTK 385
+R F+ G+ R+L++TD+ RGID+++V++VINYD+P++ + Y+HR+GR+GRFG K
Sbjct: 303 DRDKVMNDFRTGHSRVLISTDVWARGIDVQQVSLVINYDLPENMENYIHRIGRSGRFGRK 362
Query: 386 GLAITFVSSASDSDILNQVSKFMFLLI 412
G+AI F++ SD L ++ +F + I
Sbjct: 363 GVAINFITK-SDGSTLKEIERFYHIKI 388
>gi|240279271|gb|EER42776.1| ATP-dependent RNA helicase DHH1 [Ajellomyces capsulatus H143]
gi|325089541|gb|EGC42851.1| ATP-dependent RNA helicase DHH1 [Ajellomyces capsulatus H88]
Length = 514
Score = 261 bits (667), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 153/394 (38%), Positives = 220/394 (55%), Gaps = 20/394 (5%)
Query: 1 MGETRDNEYEDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRA 60
+GE+ ++ + L P T+ A KG F DF +K EL+
Sbjct: 14 LGESHSEKWRENL-------KMPPKDTRTQTEDVTATKGL------EFEDFYIKRELMMG 60
Query: 61 IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVL 120
I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++T P + AL+L
Sbjct: 61 IFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERTNPKNSKTQALIL 120
Query: 121 CHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILA 179
TRELA Q + +L I V V GG ++ D+++ NE I+VGTPGRIL
Sbjct: 121 VPTRELALQTSQVCKTLGKHL-GINVMVTTGGTGLQ--DDIIRLNEAVHIIVGTPGRILD 177
Query: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
LA L + F++DE DK+L S + ++++ P D+QVM+FSAT ++
Sbjct: 178 LASKGVADLSDCSTFVMDEADKLL-SPEFTPVIEQLLSFHPKDRQVMLFSATFPLIVKSF 236
Query: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 299
K M++P EI + DE LTL G+ Q+Y + E +K LN L L NQ +IF S +
Sbjct: 237 KDKHMRNPYEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFSKLQINQSIIFCNSTN 294
Query: 300 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNI 359
R L K + E + H+ M Q R + F+ G R LV +DL+ RGIDI+ VN+
Sbjct: 295 RVELLAKKITELGYSCFYSHAKMLQHNRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNV 354
Query: 360 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 355 VINFDFPKNAETYLHRIGRSGRFGHLGLAINLIN 388
>gi|366989153|ref|XP_003674344.1| hypothetical protein NCAS_0A14060 [Naumovozyma castellii CBS 4309]
gi|342300207|emb|CCC67964.1| hypothetical protein NCAS_0A14060 [Naumovozyma castellii CBS 4309]
Length = 510
Score = 261 bits (667), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 144/347 (41%), Positives = 207/347 (59%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F DF LK ELL I ++GFE PS +Q E IP AI G D++ +AK+G GKTA FV+ TL++
Sbjct: 45 FEDFYLKRELLMGIFEAGFEKPSPIQEESIPIAITGRDILARAKNGTGKTAAFVIPTLEK 104
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
+P ++ AL++ TRELA Q + I V GG N++ D+L+ NE
Sbjct: 105 IKPKLNKIQALIMVPTRELALQTSQVVRTLGKHC-GISCMVTTGGTNLR--DDILRLNES 161
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
++VGTPGR+L LA K L + + FI+DE DKML S D + +++I P Q +
Sbjct: 162 VHVLVGTPGRVLDLASRKVADLSDCQLFIMDEADKML-SRDFKTIIEQILIFLPKKHQSL 220
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K + +P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 221 LFSATFPLTVKEFMVKHLTNPYEINLMDE--LTLKGITQYYAFVEERQKLHCLNTLFSKL 278
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + + + H+ M Q+ER + F++G R LV +D
Sbjct: 279 QINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQERNRVFHEFRQGKVRTLVCSD 338
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +++TYLHR+GR+GRFG GLAI ++
Sbjct: 339 LLTRGIDIQAVNVVINFDFPKTSETYLHRIGRSGRFGHLGLAINLIN 385
>gi|6320041|ref|NP_010121.1| Dhh1p [Saccharomyces cerevisiae S288c]
gi|729329|sp|P39517.1|DHH1_YEAST RecName: Full=ATP-dependent RNA helicase DHH1; AltName:
Full=DExD/H-box helicase 1
gi|160380644|sp|A6ZXG9.1|DHH1_YEAS7 RecName: Full=ATP-dependent RNA helicase DHH1; AltName:
Full=DExD/H-box helicase 1
gi|4353|emb|CAA46853.1| RNA-helicase of the DEAD-BOX family [Saccharomyces cerevisiae]
gi|1061279|emb|CAA91586.1| putative RNA helicase [Saccharomyces cerevisiae]
gi|1431254|emb|CAA98734.1| DHH1 [Saccharomyces cerevisiae]
gi|151941843|gb|EDN60199.1| ATP-dependent RNA helicase [Saccharomyces cerevisiae YJM789]
gi|190405159|gb|EDV08426.1| hypothetical protein SCRG_00654 [Saccharomyces cerevisiae RM11-1a]
gi|285810876|tpg|DAA11700.1| TPA: Dhh1p [Saccharomyces cerevisiae S288c]
gi|323309886|gb|EGA63088.1| Dhh1p [Saccharomyces cerevisiae FostersO]
gi|349576920|dbj|GAA22089.1| K7_Dhh1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365766697|gb|EHN08192.1| Dhh1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392300665|gb|EIW11756.1| Dhh1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 506
Score = 261 bits (667), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 145/347 (41%), Positives = 205/347 (59%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F DF LK ELL I ++GFE PS +Q E IP AI G D++ +AK+G GKTA FV+ TL++
Sbjct: 48 FEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEK 107
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
+P ++ AL++ TRELA Q + I V GG N++ D+L+ NE
Sbjct: 108 VKPKLNKIQALIMVPTRELALQTSQVVRTLGKHC-GISCMVTTGGTNLR--DDILRLNET 164
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
I+VGTPGR+L LA K L + FI+DE DKML S D + +++I P Q +
Sbjct: 165 VHILVGTPGRVLDLASRKVADLSDCSLFIMDEADKML-SRDFKTIIEQILSFLPPTHQSL 223
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K + P EI + +E LTL G+ Q+Y + E +K LN L L
Sbjct: 224 LFSATFPLTVKEFMVKHLHKPYEINLMEE--LTLKGITQYYAFVEERQKLHCLNTLFSKL 281
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + + + H+ M Q+ER + F++G R LV +D
Sbjct: 282 QINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQERNKVFHEFRQGKVRTLVCSD 341
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 342 LLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLIN 388
>gi|295666101|ref|XP_002793601.1| ATP-dependent RNA helicase SUB2 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226277895|gb|EEH33461.1| ATP-dependent RNA helicase SUB2 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 467
Score = 261 bits (667), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 120/180 (66%), Positives = 150/180 (83%), Gaps = 2/180 (1%)
Query: 73 QHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICH 132
Q CIP AIL +DV+CQAKSG+GKTAVFVL+TL Q EP PG+ + LV+CHTRELAYQI +
Sbjct: 188 QQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTLHQLEPVPGECSILVMCHTRELAYQIKN 247
Query: 133 EFERFSTYLPDIKVAVFYGGVNIKIHKDLL--KNECPQIVVGTPGRILALARDKDLSLKN 190
E+ RFS YLPD+K AVFYGG ++ +LL K+ P IVVGTPGR+ AL RDK LSL++
Sbjct: 248 EYARFSKYLPDVKTAVFYGGTPMQKDIELLSSKDNYPNIVVGTPGRLNALVRDKKLSLRS 307
Query: 191 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 250
++ F+LDECDKML+ +DMRRDVQEIF+ TP DKQVMMFSATLS+E+RP+CKKFM++P+E+
Sbjct: 308 IKAFVLDECDKMLDQIDMRRDVQEIFRATPADKQVMMFSATLSQEVRPICKKFMRNPLEV 367
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 50/83 (60%), Gaps = 20/83 (24%)
Query: 9 YEDELLDYEEEDAQ------------APDSVATKANGE-------AAKKG-YVGIHSSGF 48
+E++L+DY +E+ Q + A K G+ A KKG YVGIHS+GF
Sbjct: 3 HEEDLIDYSDEELQATDAAAASIAPAGTNGAALKKEGDLTVSGVRADKKGSYVGIHSTGF 62
Query: 49 RDFLLKPELLRAIVDSGFEHPSE 71
RDFLLK ELLRAI D GFEHPSE
Sbjct: 63 RDFLLKGELLRAITDCGFEHPSE 85
>gi|261188573|ref|XP_002620701.1| ATP-dependent RNA helicase DHH1 [Ajellomyces dermatitidis SLH14081]
gi|239593185|gb|EEQ75766.1| ATP-dependent RNA helicase DHH1 [Ajellomyces dermatitidis SLH14081]
gi|239613245|gb|EEQ90232.1| ATP-dependent RNA helicase DHH1 [Ajellomyces dermatitidis ER-3]
gi|327357431|gb|EGE86288.1| ATP-dependent RNA helicase DHH1 [Ajellomyces dermatitidis ATCC
18188]
Length = 507
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 151/379 (39%), Positives = 213/379 (56%), Gaps = 13/379 (3%)
Query: 16 YEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHE 75
+ E P T+ A KG F DF +K EL+ I ++GFE PS +Q E
Sbjct: 22 WRENLKAPPKDTRTQTEDVTATKGL------EFEDFYIKRELMMGIFEAGFEKPSPIQEE 75
Query: 76 CIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFE 135
IP A+ G D++ +AK+G GKTA FV+ TL++T P + AL+L TRELA Q +
Sbjct: 76 TIPVALTGRDILARAKNGTGKTAAFVIPTLERTNPKNSKTQALILVPTRELALQTSQVCK 135
Query: 136 RFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKNVRHF 194
+L I V V GG ++ D+++ NE I+VGTPGRIL LA L F
Sbjct: 136 TLGKHL-GINVMVTTGGTGLQ--DDIIRLNEAVHIIVGTPGRILDLASKGVADLSECSTF 192
Query: 195 ILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDD 254
++DE DK+L S + ++++ P D+QVM+FSAT ++ K M++P EI + D
Sbjct: 193 VMDEADKLL-SPEFTPVIEQLLSFHPKDRQVMLFSATFPMIVKSFKDKHMRNPYEINLMD 251
Query: 255 EAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFP 314
E LTL G+ Q+Y + E +K LN L L NQ +IF S +R L K + E +
Sbjct: 252 E--LTLRGITQYYAFVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYS 309
Query: 315 SICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLH 374
H+ M Q R + F+ G R LV +DL+ RGIDI+ VN+VIN+D P +A+TYLH
Sbjct: 310 CFYSHAKMLQHNRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLH 369
Query: 375 RVGRAGRFGTKGLAITFVS 393
R+GR+GRFG GLAI ++
Sbjct: 370 RIGRSGRFGHLGLAINLIN 388
>gi|410075884|ref|XP_003955524.1| hypothetical protein KAFR_0B00910 [Kazachstania africana CBS 2517]
gi|372462107|emb|CCF56389.1| hypothetical protein KAFR_0B00910 [Kazachstania africana CBS 2517]
Length = 512
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 145/354 (40%), Positives = 208/354 (58%), Gaps = 7/354 (1%)
Query: 41 VGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVF 100
+ I + F DF LK ELL I ++GFE PS +Q E IP AI G D++ +AK+G GKTA F
Sbjct: 40 LNIKGNTFEDFHLKRELLMGIFEAGFEKPSPIQEESIPVAITGRDILARAKNGTGKTAAF 99
Query: 101 VLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKD 160
V+ TLQ+ +P ++ AL++ TRELA Q + I V GG N++ D
Sbjct: 100 VIPTLQKIKPKVNKIQALIMVPTRELALQTSQVVRTLGKHC-GISCMVTTGGTNLR--DD 156
Query: 161 LLK-NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
+L+ N+ ++VGTPGR+L LA K L FI+DE DKML S D + +++I
Sbjct: 157 ILRLNDTVHVLVGTPGRVLDLASRKIADLSECALFIMDEADKML-SRDFKTIIEQILIFL 215
Query: 220 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKL 279
P + Q ++FSAT ++ K + P EI + +E LTL G+ Q+Y + E +K L
Sbjct: 216 PKNHQSLLFSATFPLTVKEFMVKHLNKPYEINLMEE--LTLKGITQYYAFVEERQKLHCL 273
Query: 280 NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNK 339
N L L NQ +IF S +R L K + + + H+ M Q+ER + F++G
Sbjct: 274 NTLFAKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQERNKVFHEFRQGKV 333
Query: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
R LV +DL+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 334 RTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLIN 387
>gi|50305963|ref|XP_452942.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74660551|sp|Q6CSZ7.1|DHH1_KLULA RecName: Full=ATP-dependent RNA helicase DHH1
gi|49642075|emb|CAH01793.1| KLLA0C16599p [Kluyveromyces lactis]
Length = 514
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 146/348 (41%), Positives = 205/348 (58%), Gaps = 7/348 (2%)
Query: 47 GFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQ 106
F DF LK ELL I ++GFE PS +Q E IP AI G D++ +AK+G GKTA FV+ TL+
Sbjct: 37 SFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAIAGKDILARAKNGTGKTAAFVIPTLE 96
Query: 107 QTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NE 165
+ +P ++ AL++ TRELA Q + I V GG N++ D+++ NE
Sbjct: 97 KVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHC-GISCMVTTGGTNLR--DDIMRLNE 153
Query: 166 CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQV 225
I+VGTPGR+L LA + L FI+DE DKML S D + ++I P +Q+
Sbjct: 154 PVHILVGTPGRVLDLASRRVTDLSECHLFIMDEADKML-SRDFKVLAEQILGFLPERRQL 212
Query: 226 MMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDA 285
++FSAT ++ K +++P EI + DE LTL G+ Q Y + E +K LN L
Sbjct: 213 LLFSATFPVTVKEFMVKHLKNPHEINLMDE--LTLKGISQFYAFVEEKQKLHCLNTLFSK 270
Query: 286 LDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVAT 345
L NQ +IF S +R L K + E F H+ M Q ER + F++G R LV +
Sbjct: 271 LQINQAIIFCNSTNRVELLAKKITELGFSCYYSHARMKQSERNKVFHEFRQGKVRTLVCS 330
Query: 346 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
DL+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 331 DLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLIN 378
>gi|259145266|emb|CAY78530.1| Fal1p [Saccharomyces cerevisiae EC1118]
gi|323309503|gb|EGA62714.1| Fal1p [Saccharomyces cerevisiae FostersO]
gi|323334268|gb|EGA75650.1| Fal1p [Saccharomyces cerevisiae AWRI796]
gi|349577091|dbj|GAA22260.1| K7_Fal1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 399
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 145/366 (39%), Positives = 223/366 (60%), Gaps = 7/366 (1%)
Query: 45 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLST 104
SS F LK +LLR I GFE PS +Q I Q I G DVI QA+SG GKTA F +
Sbjct: 22 SSTFESMNLKDDLLRGIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTIGL 81
Query: 105 LQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIH-KDLLK 163
LQ + + AL+L TRELA QI + Y+ ++ GG +K K + K
Sbjct: 82 LQAIDLRKKDLQALILSPTRELASQIGQVVKNLGDYM-NVNAFAITGGKTLKDDLKKMQK 140
Query: 164 NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML-ESLDMRRDVQEIFKMTPHD 222
+ C Q V GTPGR+L + + + L +NV+ +LDE D++L E+L ++ + +IF P +
Sbjct: 141 HGC-QAVSGTPGRVLDMIKRQMLQTRNVQMLVLDEADELLSETLGFKQQIYDIFAKLPKN 199
Query: 223 KQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLND 281
QV++ SAT++K+I V +KFM DP++I V + +++L G+ Q+ + + + E K L D
Sbjct: 200 CQVVVVSATMNKDILEVTRKFMNDPVKILVKRD-EISLEGIKQYVVNVDKEEWKFDTLCD 258
Query: 282 LLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRI 341
+ D+L Q VIF + + L++ L++ NF + +H M QEER F+ G+ R+
Sbjct: 259 IYDSLTITQCVIFCNTKKKVDWLSQRLIQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRV 318
Query: 342 LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDIL 401
L++TD+ RGID+++V++VINYD+P+ + Y+HR+GR+GRFG KG+AI F++ A D L
Sbjct: 319 LISTDVWARGIDVQQVSLVINYDLPEIIENYIHRIGRSGRFGRKGVAINFITKA-DLAKL 377
Query: 402 NQVSKF 407
++ KF
Sbjct: 378 REIEKF 383
>gi|190405005|gb|EDV08272.1| eukaryotic initiation factor 4A-12 [Saccharomyces cerevisiae
RM11-1a]
Length = 399
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 145/366 (39%), Positives = 223/366 (60%), Gaps = 7/366 (1%)
Query: 45 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLST 104
SS F LK +LLR I GFE PS +Q I Q I G DVI QA+SG GKTA F +
Sbjct: 22 SSTFESMNLKDDLLRGIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTIGL 81
Query: 105 LQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIH-KDLLK 163
LQ + + AL+L TRELA QI + Y+ ++ GG +K K + K
Sbjct: 82 LQAIDLRKKDLQALILSPTRELASQIGQVVKNLGDYM-NVNAFAITGGKTLKDDLKKMQK 140
Query: 164 NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML-ESLDMRRDVQEIFKMTPHD 222
+ C Q V GTPGR+L + + + L +NV+ +LDE D++L E+L ++ + +IF P +
Sbjct: 141 HGC-QAVSGTPGRVLDMIKRQMLQTRNVQMLVLDEADELLSETLGFKQQIYDIFAKLPKN 199
Query: 223 KQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLND 281
QV++ SAT++K+I V +KFM DP++I V + +++L G+ Q+ + + + E K L D
Sbjct: 200 CQVVVVSATMNKDILEVTRKFMNDPVKILVKRD-EISLEGIKQYVVNVDKEEWKFDTLCD 258
Query: 282 LLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRI 341
+ D+L Q VIF + + L++ L++ NF + +H M QEER F+ G+ R+
Sbjct: 259 IYDSLTITQCVIFCNTKKKVDWLSQRLIQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRV 318
Query: 342 LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDIL 401
L++TD+ RGID+++V++VINYD+P+ + Y+HR+GR+GRFG KG+AI F++ A D L
Sbjct: 319 LISTDVWARGIDVQQVSLVINYDLPEIIENYIHRIGRSGRFGRKGVAINFITKA-DLAKL 377
Query: 402 NQVSKF 407
++ KF
Sbjct: 378 REIEKF 383
>gi|444323445|ref|XP_004182363.1| hypothetical protein TBLA_0I01860 [Tetrapisispora blattae CBS 6284]
gi|387515410|emb|CCH62844.1| hypothetical protein TBLA_0I01860 [Tetrapisispora blattae CBS 6284]
Length = 387
Score = 261 bits (666), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 147/369 (39%), Positives = 224/369 (60%), Gaps = 7/369 (1%)
Query: 45 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLST 104
SS F LK +LLR I GFE PS +Q I Q I G DVI QA+SG GKTA F +
Sbjct: 22 SSSFESMKLKDDLLRGIYSYGFEAPSAIQSRAITQIISGKDVIAQAQSGTGKTATFTIGM 81
Query: 105 LQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIH-KDLLK 163
LQ + + AL+L TRELA QI Y+ +++ GG +K K + +
Sbjct: 82 LQAIDLKNKDLQALILSPTRELASQIHQVVSNLGDYM-NVQSFAITGGKTMKDDIKKIQR 140
Query: 164 NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML-ESLDMRRDVQEIFKMTPHD 222
N C Q+V GTPGR+L + + + L +N++ ILDE D++L E+L ++ + +IF P
Sbjct: 141 NGC-QVVSGTPGRVLDMFKRQMLKSRNIKMLILDEADELLSETLGFKQQIYDIFTKLPPS 199
Query: 223 KQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLND 281
QV++ SAT++K+I + KKFM DP++I V + +++L G+ Q+Y+ + E K L D
Sbjct: 200 CQVVVVSATMNKDILEITKKFMNDPVKILVKRD-EISLEGIKQYYVNVEREEWKFDTLCD 258
Query: 282 LLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRI 341
L D+L Q VIF S + L++ L++ NF + +H M Q+ER F+ G R+
Sbjct: 259 LYDSLTITQCVIFCNSKKKVDWLSQKLIQNNFAIVSMHGDMEQDERDRVMNEFRTGQSRV 318
Query: 342 LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDIL 401
LV+TD+ RGID+++V++VINYD+ ++ + Y+HR+GR+GRFG KG+AI F++ +D +L
Sbjct: 319 LVSTDVWARGIDVQQVSLVINYDLCENLENYIHRIGRSGRFGRKGIAINFITK-NDVLLL 377
Query: 402 NQVSKFMFL 410
Q+ K + L
Sbjct: 378 KQIEKIIKL 386
>gi|225559536|gb|EEH07818.1| ATP-dependent RNA helicase DHH1 [Ajellomyces capsulatus G186AR]
Length = 511
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 153/394 (38%), Positives = 220/394 (55%), Gaps = 20/394 (5%)
Query: 1 MGETRDNEYEDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRA 60
+GE+ ++ + L P T+ A KG F DF +K EL+
Sbjct: 14 LGESHSEKWRENL-------KVPPKDTRTQTEDVTATKGL------EFEDFYIKRELMMG 60
Query: 61 IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVL 120
I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++T P + AL+L
Sbjct: 61 IFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERTNPKNSKTQALIL 120
Query: 121 CHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILA 179
TRELA Q + +L I V V GG ++ D+++ NE I+VGTPGRIL
Sbjct: 121 VPTRELALQTSQVCKTLGKHL-GINVMVTTGGTGLQ--DDIIRLNEAVHIIVGTPGRILD 177
Query: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
LA L + F++DE DK+L S + ++++ P D+QVM+FSAT ++
Sbjct: 178 LASKGVADLSDCSTFVMDEADKLL-SPEFTPVIEQLLSFHPKDRQVMLFSATFPLIVKSF 236
Query: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 299
K M++P EI + DE LTL G+ Q+Y + E +K LN L L NQ +IF S +
Sbjct: 237 KDKHMRNPYEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFSKLQINQSIIFCNSTN 294
Query: 300 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNI 359
R L K + E + H+ M Q R + F+ G R LV +DL+ RGIDI+ VN+
Sbjct: 295 RVELLAKKITELGYSCFYSHAKMLQHNRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNV 354
Query: 360 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 355 VINFDFPKNAETYLHRIGRSGRFGHLGLAINLIN 388
>gi|282164729|ref|YP_003357114.1| putative ATP-dependent RNA helicase [Methanocella paludicola SANAE]
gi|282157043|dbj|BAI62131.1| putative ATP-dependent RNA helicase [Methanocella paludicola SANAE]
Length = 471
Score = 260 bits (665), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 139/347 (40%), Positives = 206/347 (59%), Gaps = 5/347 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F++ L L+A+ GFE + +Q + IP A+ G DVI QA++G GKTA F + ++
Sbjct: 4 FQELSLSNATLKALAGMGFEEATPIQEQAIPAALAGKDVIGQAQTGTGKTAAFGIPMIEN 63
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ G + +V+ TRELA Q+ E R + I YGG +IK + LK P
Sbjct: 64 IDAGSGDIQGIVITPTRELAVQVAEELNRIGEFR-GIHTLPIYGGQDIKRQINGLKRR-P 121
Query: 168 QIVVGTPGRIL-ALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
QI+VGTPGR++ + R K +SLKN+R +LDE D+ML+ + D++EI K TP +Q +
Sbjct: 122 QIIVGTPGRLVDHMMRRKTISLKNIRTVVLDEADEMLD-MGFIEDIEEILKRTPEGRQTL 180
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT+ IR + ++FM+DP I + ++ +T+ G Q Y ++ E K L LLD
Sbjct: 181 LFSATIPAPIRKLAERFMKDPQTIGIKSKS-MTVSGTEQAYYEVPEKHKFEVLCRLLDVQ 239
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
++FV++ R EL K L E +P+ IH ++Q +R + +GFKEG +LVATD
Sbjct: 240 LPALAIVFVRTKRRVDELTKALGERGYPAEGIHGDLAQSKRDSVMRGFKEGTTEVLVATD 299
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
+ RG+DI V V N D+P D+Y+HR+GR GR G KG AITFV+
Sbjct: 300 VAARGLDISGVTHVYNLDIPQDPDSYVHRIGRTGRAGKKGTAITFVT 346
>gi|226294425|gb|EEH49845.1| ATP-dependent RNA helicase DHH1 [Paracoccidioides brasiliensis
Pb18]
Length = 577
Score = 260 bits (665), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 150/379 (39%), Positives = 214/379 (56%), Gaps = 13/379 (3%)
Query: 16 YEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHE 75
++E P T+ A KG F DF +K EL+ I ++GFE PS +Q E
Sbjct: 85 WKEHLKAPPKDTRTQTEDVTATKGL------EFEDFYIKRELMMGIFEAGFEKPSPIQEE 138
Query: 76 CIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFE 135
IP A+ G D++ +AK+G GKTA FV+ TL++T P + AL+L TRELA Q +
Sbjct: 139 TIPVALTGRDILARAKNGTGKTAAFVIPTLERTNPKNSKTQALILVPTRELALQTSQVCK 198
Query: 136 RFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKNVRHF 194
+L I V V GG ++ D+++ NE I+VGTPGRIL LA L F
Sbjct: 199 TLGKHL-GINVMVTTGGTGLQ--DDIIRLNEAVHIIVGTPGRILDLASKGVADLSECSTF 255
Query: 195 ILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDD 254
++DE DK+L S + ++++ P D+Q+M+FSAT ++ K M++P EI + D
Sbjct: 256 VMDEADKLL-SPEFTPVIEQLLSFHPKDRQIMLFSATFPLIVKSFKDKHMRNPYEINLMD 314
Query: 255 EAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFP 314
E LTL G+ Q+Y + E +K LN L L NQ +IF S +R L K + E +
Sbjct: 315 E--LTLRGITQYYAFVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYS 372
Query: 315 SICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLH 374
H+ M Q R + F+ G R LV +DL+ RGIDI+ VN+VIN+D P +A+TYLH
Sbjct: 373 CFYSHAKMLQHNRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLH 432
Query: 375 RVGRAGRFGTKGLAITFVS 393
R+GR+GRFG GLAI ++
Sbjct: 433 RIGRSGRFGHLGLAINLIN 451
>gi|295657321|ref|XP_002789230.1| ATP-dependent RNA helicase DHH1 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226283998|gb|EEH39564.1| ATP-dependent RNA helicase DHH1 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 515
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 150/379 (39%), Positives = 214/379 (56%), Gaps = 13/379 (3%)
Query: 16 YEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHE 75
++E P T+ A KG F DF +K EL+ I ++GFE PS +Q E
Sbjct: 23 WKEHLKAPPKDTRTQTEDVTATKGL------EFEDFYIKRELMMGIFEAGFEKPSPIQEE 76
Query: 76 CIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFE 135
IP A+ G D++ +AK+G GKTA FV+ TL++T P + AL+L TRELA Q +
Sbjct: 77 TIPVALTGRDILARAKNGTGKTAAFVIPTLERTNPKNSKTQALILVPTRELALQTSQVCK 136
Query: 136 RFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKNVRHF 194
+L I V V GG ++ D+++ NE I+VGTPGRIL LA L F
Sbjct: 137 TLGKHL-GINVMVTTGGTGLQ--DDIIRLNEAVHIIVGTPGRILDLASKGVADLSECSTF 193
Query: 195 ILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDD 254
++DE DK+L S + ++++ P D+Q+M+FSAT ++ K M++P EI + D
Sbjct: 194 VMDEADKLL-SPEFTPVIEQLLSFHPKDRQIMLFSATFPLIVKSFKDKHMRNPYEINLMD 252
Query: 255 EAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFP 314
E LTL G+ Q+Y + E +K LN L L NQ +IF S +R L K + E +
Sbjct: 253 E--LTLRGITQYYAFVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYS 310
Query: 315 SICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLH 374
H+ M Q R + F+ G R LV +DL+ RGIDI+ VN+VIN+D P +A+TYLH
Sbjct: 311 CFYSHAKMLQHNRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLH 370
Query: 375 RVGRAGRFGTKGLAITFVS 393
R+GR+GRFG GLAI ++
Sbjct: 371 RIGRSGRFGHLGLAINLIN 389
>gi|323305660|gb|EGA59400.1| Dhh1p [Saccharomyces cerevisiae FostersB]
Length = 506
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 145/347 (41%), Positives = 204/347 (58%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F DF LK ELL I ++GFE PS +Q E IP AI G D++ +AK+G GKTA FV+ TL++
Sbjct: 48 FEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEK 107
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
+P ++ AL++ TRELA Q + I V GG N++ D+L+ NE
Sbjct: 108 VKPKLNKIQALIMVPTRELALQTSQVVRTLGKHC-GISCMVTTGGTNLR--DDILRLNET 164
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
I+VGTPGR+L LA K L + FI+DE DKML S D + +++I P Q +
Sbjct: 165 VHILVGTPGRVLDLASRKVADLSDCSLFIMDEADKML-SRDFKTIIEQILSFLPPTHQSL 223
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K P EI + +E LTL G+ Q+Y + E +K LN L L
Sbjct: 224 LFSATFPLTVKEFMVKHQHKPYEINLMEE--LTLKGITQYYAFVEERQKLHCLNTLFSKL 281
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + + + H+ M Q+ER + F++G R LV +D
Sbjct: 282 QINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQERNKVFHEFRQGKVRTLVCSD 341
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 342 LLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLIN 388
>gi|398390239|ref|XP_003848580.1| hypothetical protein MYCGRDRAFT_101609 [Zymoseptoria tritici
IPO323]
gi|339468455|gb|EGP83556.1| hypothetical protein MYCGRDRAFT_101609 [Zymoseptoria tritici
IPO323]
Length = 504
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 146/347 (42%), Positives = 207/347 (59%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F +F LK ELL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++
Sbjct: 50 FEEFYLKRELLMGIFEAGFEKPSPIQEETIPVALSGRDILARAKNGTGKTAAFVIPTLER 109
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
P +V AL+L TRELA Q + +L I V V GG ++ D+++ E
Sbjct: 110 INPKLDKVQALLLVPTRELALQTSQVCKTLGKHL-GINVMVTTGGTGLR--DDIMRLAET 166
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
I+VGTPGRIL LA L + F++DE DK+L S + ++++ K P D+QVM
Sbjct: 167 VHIIVGTPGRILDLAGKGVADLSEAKTFVMDEADKLL-SPEFTVTIEQLLKFHPKDRQVM 225
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ + M DP EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 226 LFSATFPVVVKEFKDRHMNDPHEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFSRL 283
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
+ NQ +IF S +R L K + E + H+ M Q+ R + F+ G R LV +D
Sbjct: 284 NINQSIIFCNSTTRVELLAKKITELGYSCFYSHAKMLQQHRNRVFHDFRNGAMRNLVCSD 343
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 344 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLIN 390
>gi|225685109|gb|EEH23393.1| ATP-dependent RNA helicase dhh1 [Paracoccidioides brasiliensis
Pb03]
Length = 515
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 150/379 (39%), Positives = 214/379 (56%), Gaps = 13/379 (3%)
Query: 16 YEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHE 75
++E P T+ A KG F DF +K EL+ I ++GFE PS +Q E
Sbjct: 23 WKEHLKAPPKDTRTQTEDVTATKGL------EFEDFYIKRELMMGIFEAGFEKPSPIQEE 76
Query: 76 CIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFE 135
IP A+ G D++ +AK+G GKTA FV+ TL++T P + AL+L TRELA Q +
Sbjct: 77 TIPVALTGRDILARAKNGTGKTAAFVIPTLERTNPKNSKTQALILVPTRELALQTSQVCK 136
Query: 136 RFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKNVRHF 194
+L I V V GG ++ D+++ NE I+VGTPGRIL LA L F
Sbjct: 137 TLGKHL-GINVMVTTGGTGLQ--DDIIRLNEAVHIIVGTPGRILDLASKGVADLSECSTF 193
Query: 195 ILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDD 254
++DE DK+L S + ++++ P D+Q+M+FSAT ++ K M++P EI + D
Sbjct: 194 VMDEADKLL-SPEFTPVIEQLLSFHPKDRQIMLFSATFPLIVKSFKDKHMRNPYEINLMD 252
Query: 255 EAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFP 314
E LTL G+ Q+Y + E +K LN L L NQ +IF S +R L K + E +
Sbjct: 253 E--LTLRGITQYYAFVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYS 310
Query: 315 SICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLH 374
H+ M Q R + F+ G R LV +DL+ RGIDI+ VN+VIN+D P +A+TYLH
Sbjct: 311 CFYSHAKMLQHNRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLH 370
Query: 375 RVGRAGRFGTKGLAITFVS 393
R+GR+GRFG GLAI ++
Sbjct: 371 RIGRSGRFGHLGLAINLIN 389
>gi|258566537|ref|XP_002584013.1| hypothetical protein UREG_06980 [Uncinocarpus reesii 1704]
gi|237907714|gb|EEP82115.1| hypothetical protein UREG_06980 [Uncinocarpus reesii 1704]
Length = 512
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 153/389 (39%), Positives = 220/389 (56%), Gaps = 16/389 (4%)
Query: 5 RDNEYEDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDS 64
R+N E + ++E+ P T+ A KG F DF +K EL+ I ++
Sbjct: 19 RENGAE---VKWKEQLKLPPKDTRTQTEDVTATKGLE------FEDFYIKRELMMGIFEA 69
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++T P + AL+L TR
Sbjct: 70 GFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERTNPKISKTQALILVPTR 129
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARD 183
ELA Q + +L I V V GG ++ D+++ N+ I+VGTPGRIL LA
Sbjct: 130 ELALQTSQVCKTLGKHL-GINVMVTTGGTGLQ--DDIIRLNDTVHIIVGTPGRILDLASK 186
Query: 184 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF 243
L F++DE DK+L S + ++++ P D+QVM+FSAT ++ K
Sbjct: 187 GVADLSECATFVMDEADKLL-SPEFTPVIEQLLSFHPKDRQVMLFSATFPMIVKSFKDKH 245
Query: 244 MQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAE 303
M++P EI + DE LTL G+ Q+Y + E +K LN L L NQ +IF S +R
Sbjct: 246 MRNPYEINLMDE--LTLRGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSTNRVEL 303
Query: 304 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 363
L K + E + H+ M Q+ R + F+ G R LV +DL+ RGIDI+ VN+VIN+
Sbjct: 304 LAKKITELGYSCFYSHARMFQQNRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINF 363
Query: 364 DMPDSADTYLHRVGRAGRFGTKGLAITFV 392
D P +A+TYLHR+GR+GRFG GLAI +
Sbjct: 364 DFPKNAETYLHRIGRSGRFGHLGLAINLI 392
>gi|50289935|ref|XP_447399.1| hypothetical protein [Candida glabrata CBS 138]
gi|74661253|sp|Q6FQU5.1|DHH1_CANGA RecName: Full=ATP-dependent RNA helicase DHH1
gi|49526709|emb|CAG60336.1| unnamed protein product [Candida glabrata]
Length = 507
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 149/392 (38%), Positives = 220/392 (56%), Gaps = 22/392 (5%)
Query: 4 TRDNEYEDEL-LDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIV 62
+ DN ++ +L L ++ Q D + TK N F DF LK ELL I
Sbjct: 2 SEDNSWKTQLNLPKKDTRPQTDDVLNTKGNS--------------FEDFYLKRELLMGIF 47
Query: 63 DSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCH 122
++GFE PS +Q E IP AI G D++ +AK+G GKTA FV+ TL++ +P ++ AL++
Sbjct: 48 EAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKIKPKLNKIQALIMVP 107
Query: 123 TRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALA 181
TRELA Q + + V GG N++ D+L+ NE ++VGTPGR+L LA
Sbjct: 108 TRELALQTSQVIRTLGRHC-GVSCMVTTGGTNLR--DDILRLNETVHVLVGTPGRVLDLA 164
Query: 182 RDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCK 241
K L F++DE DKML S D + ++++ P Q ++FSAT ++
Sbjct: 165 SRKVADLSECSLFVMDEADKML-SRDFKTIIEQVLTFLPKAHQSLLFSATFPLTVKEFMV 223
Query: 242 KFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRA 301
K + P EI + +E LTL G+ Q+Y + E +K LN L L NQ +IF S +R
Sbjct: 224 KHLHKPYEINLMEE--LTLKGITQYYAFVEERQKLHCLNTLFSKLQINQAIIFCNSTNRV 281
Query: 302 AELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVI 361
L K + + + H+ M Q++R + F++G R LV +DL+ RGIDI+ VN+VI
Sbjct: 282 ELLAKKITDLGYSCYYSHARMKQQDRNKVFHDFRQGKVRTLVCSDLLTRGIDIQAVNVVI 341
Query: 362 NYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
N+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 342 NFDFPKTAETYLHRIGRSGRFGHLGLAINLIN 373
>gi|255719332|ref|XP_002555946.1| KLTH0H01562p [Lachancea thermotolerans]
gi|238941912|emb|CAR30084.1| KLTH0H01562p [Lachancea thermotolerans CBS 6340]
Length = 491
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 146/347 (42%), Positives = 203/347 (58%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F DF LK ELL I ++GFE PS +Q E IP AI G DV+ +AK+G GKTA FV+ TL++
Sbjct: 31 FEDFYLKRELLMGIFEAGFEKPSPIQEEAIPIAIAGRDVLARAKNGTGKTAAFVVPTLEK 90
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
+P ++ AL++ TRELA Q + I V GG N++ D+L+ NE
Sbjct: 91 VKPKVNKIQALIMVPTRELALQTSQVVRTLGKHC-GISCMVTTGGTNLR--DDILRLNEP 147
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
I+VGTPGR+L LA K L F++DE DKML S D + +++I P Q +
Sbjct: 148 VHILVGTPGRVLDLASRKVADLSECPLFVMDEADKML-SRDFKAIIEQILTFLPPVHQSL 206
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K + P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 207 LFSATFPLTVKEFMVKHLHKPYEINLMDE--LTLKGITQYYAFVEERQKLHCLNTLFSKL 264
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + + + H+ M Q ER + F++G R LV +D
Sbjct: 265 QINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQSERNKVFHEFRQGKVRTLVCSD 324
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 325 LLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLIN 371
>gi|444321280|ref|XP_004181296.1| hypothetical protein TBLA_0F02360 [Tetrapisispora blattae CBS 6284]
gi|387514340|emb|CCH61777.1| hypothetical protein TBLA_0F02360 [Tetrapisispora blattae CBS 6284]
Length = 585
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 151/389 (38%), Positives = 219/389 (56%), Gaps = 22/389 (5%)
Query: 7 NEYEDEL-LDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSG 65
N+++ +L + ++ Q D + TK N F DF LK ELL I ++G
Sbjct: 11 NDWKSKLNIPKKDTRPQTEDVLNTKGNS--------------FEDFYLKRELLMGIFEAG 56
Query: 66 FEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRE 125
FE PS +Q E IP AI G D++ +AK+G GKTA FV+ TL++ +P ++ AL++ TRE
Sbjct: 57 FEKPSPIQEESIPIAIAGRDILARAKNGTGKTAAFVIPTLEKVKPKINKIQALIMVPTRE 116
Query: 126 LAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDK 184
LA Q + I V GG N++ D+++ NE ++VGTPGR+L LA K
Sbjct: 117 LALQTSQVVRTLGKHC-GISCMVTTGGTNLR--DDIMRLNETIHVLVGTPGRVLDLASRK 173
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 244
L FI+DE DKML S D + +++I P Q ++FSAT ++ K +
Sbjct: 174 VADLSECSLFIMDEADKML-SRDFKTIIEQILIFLPKHHQSLLFSATFPLTVKEFMVKHL 232
Query: 245 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 304
P EI + DE LTL G+ Q+Y + E +K LN L L NQ +IF S +R L
Sbjct: 233 TKPYEINLMDE--LTLKGITQYYAFVEERQKLHCLNTLFSKLQINQAIIFCNSTNRVELL 290
Query: 305 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 364
K + + + H+ M Q+ER + F++G R LV +DL+ RGIDI+ VN+VIN+D
Sbjct: 291 AKKITDLGYSCYYSHARMKQQERNRVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVINFD 350
Query: 365 MPDSADTYLHRVGRAGRFGTKGLAITFVS 393
P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 351 FPKTAETYLHRIGRSGRFGHLGLAINLIN 379
>gi|448084759|ref|XP_004195684.1| Piso0_005086 [Millerozyma farinosa CBS 7064]
gi|359377106|emb|CCE85489.1| Piso0_005086 [Millerozyma farinosa CBS 7064]
Length = 541
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 143/347 (41%), Positives = 208/347 (59%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F +F LK ELL I ++GFE PS VQ E IP A+ G D++ +AK+G GKTA FV+ LQQ
Sbjct: 32 FEEFNLKRELLMGIFEAGFEKPSPVQEESIPMALAGRDILARAKNGTGKTASFVIPALQQ 91
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
T+P ++ AL+L TRELA Q +L ++ V GG +++ D+++ N+
Sbjct: 92 TKPKLNKIQALILVPTRELALQTSQVVRTLGKHL-GVECMVTTGGTSLR--DDVMRLNDP 148
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
I+VGTPGR+L LA K L F++DE DKML S + +R +++I P ++Q +
Sbjct: 149 VHILVGTPGRVLDLASRKIADLSECPLFVMDEADKML-SREFKRIIEQILAFFPANRQSL 207
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ + + P EI + DE LTL G+ Q Y + E +K LN L L
Sbjct: 208 LFSATFPLAVKSFMDQHLTKPYEINLMDE--LTLRGISQFYAFVEERQKLHCLNTLFSKL 265
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + + + H+ M Q+ R + F++G R+LV +D
Sbjct: 266 QINQAIIFCNSTNRVELLAKKITDLGYSCYYSHAKMPQQARNKVFHQFRQGKVRVLVCSD 325
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI +S
Sbjct: 326 LLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLMS 372
>gi|50556564|ref|XP_505690.1| YALI0F21032p [Yarrowia lipolytica]
gi|74659647|sp|Q6C0X2.1|DHH1_YARLI RecName: Full=ATP-dependent RNA helicase DHH1
gi|49651560|emb|CAG78499.1| YALI0F21032p [Yarrowia lipolytica CLIB122]
Length = 522
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 143/350 (40%), Positives = 206/350 (58%), Gaps = 7/350 (2%)
Query: 45 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLST 104
+GF DF LK ELL I ++GFE+PS +Q E IP A+ G D++ +AK+G GKTA FV+
Sbjct: 27 GTGFEDFFLKRELLMGIFEAGFENPSPIQEEAIPIALAGRDILARAKNGTGKTAAFVIPA 86
Query: 105 LQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKN 164
LQQ P ++ AL++ TRELA Q + +L IKV V GG N++ D+++
Sbjct: 87 LQQVNPKVNKIQALIMVPTRELALQTSQVCKTLGKHL-GIKVMVTTGGTNLR--DDIMRL 143
Query: 165 E-CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDK 223
E ++VGTPGR+L LA L FI+DE DK+L S D ++++ P D+
Sbjct: 144 EDTVHVLVGTPGRVLDLAGKGVADLSESPMFIMDEADKLL-SPDFTPIIEQVLHFFPEDR 202
Query: 224 QVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLL 283
Q+++FSAT ++ + + P EI + DE LTL G+ Q+Y + E +K LN L
Sbjct: 203 QILLFSATFPLTVKAFMDRNLHKPYEINLMDE--LTLRGITQYYAFVDEKQKLHCLNTLF 260
Query: 284 DALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILV 343
LD NQ +IF S R L + + E + H+ M Q R + F+ G R LV
Sbjct: 261 SKLDINQSIIFCNSTVRVELLARKITELGYSCYYSHAKMIQSHRNRVFHEFRNGTCRNLV 320
Query: 344 ATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
+DL+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG G+AI ++
Sbjct: 321 CSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGIAINLIN 370
>gi|323305584|gb|EGA59325.1| Fal1p [Saccharomyces cerevisiae FostersB]
Length = 408
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/366 (39%), Positives = 223/366 (60%), Gaps = 7/366 (1%)
Query: 45 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLST 104
SS F LK +LLR I GFE PS +Q I Q I G DVI QA+SG GKTA F +
Sbjct: 22 SSTFESMNLKDDLLRGIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTIGL 81
Query: 105 LQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIH-KDLLK 163
LQ + + AL+L TRELA QI + Y+ ++ GG +K K + K
Sbjct: 82 LQAIDLRKKDLQALILSPTRELASQIGQVVKNLGDYM-NVNAFAITGGKTLKDDLKKMQK 140
Query: 164 NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML-ESLDMRRDVQEIFKMTPHD 222
+ C Q V GTPGR+L + + + L +NV+ +LDE D++L E+L ++ + +IF P +
Sbjct: 141 HGC-QAVSGTPGRVLDMIKRQMLQTRNVQMLVLDEADELLSETLGFKQQIYDIFAKLPKN 199
Query: 223 KQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLND 281
QV++ SAT++K+I V +KFM DP++I V + +++L G+ Q+ + + + E K L D
Sbjct: 200 CQVVVVSATMNKDILEVTRKFMNDPVKILVKRD-EISLEGIKQYVVNVDKEEWKFDTLCD 258
Query: 282 LLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRI 341
+ D+L Q VIF + + L++ L++ NF + +H M QEER F+ G+ R+
Sbjct: 259 IYDSLTITQCVIFCNTKKKVDWLSQRLIQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRV 318
Query: 342 LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDIL 401
L++TD+ RGID+++V++VINYD+P+ + Y+HR+GR+GRFG KG+AI F++ A D L
Sbjct: 319 LISTDVWXRGIDVQQVSLVINYDLPEIIEXYIHRIGRSGRFGRKGVAINFITKA-DLAKL 377
Query: 402 NQVSKF 407
++ KF
Sbjct: 378 REIEKF 383
>gi|367011619|ref|XP_003680310.1| hypothetical protein TDEL_0C02100 [Torulaspora delbrueckii]
gi|359747969|emb|CCE91099.1| hypothetical protein TDEL_0C02100 [Torulaspora delbrueckii]
Length = 479
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 143/349 (40%), Positives = 204/349 (58%), Gaps = 7/349 (2%)
Query: 46 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTL 105
+ F DF LK ELL I ++GFE PS +Q E IP AI G D++ +AK+G GKTA FV+ L
Sbjct: 31 NSFEDFYLKRELLMGIFEAGFEKPSPIQEESIPVAIAGRDILARAKNGTGKTAAFVIPAL 90
Query: 106 QQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-N 164
++ +P ++ AL++ TRELA Q + + V GG N+K D+++ N
Sbjct: 91 EKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHC-GVSCMVTTGGTNLK--DDIMRLN 147
Query: 165 ECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQ 224
E I+VGTPGR+L LA K L FI+DE DKML S D + +++I P Q
Sbjct: 148 ETVHILVGTPGRVLDLASRKLADLSECSLFIMDEADKML-SRDFKTIIEQILIFLPQSHQ 206
Query: 225 VMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLD 284
++FSAT ++ K + P EI + +E LTL G+ Q+Y + E +K LN L
Sbjct: 207 SLLFSATFPLTVKEFMVKHLHKPYEINLMEE--LTLKGITQYYAFVEERQKLHCLNTLFS 264
Query: 285 ALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVA 344
L NQ +IF S +R L K + + + H+ M Q+ER + F++G R LV
Sbjct: 265 KLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMRQQERNRVFHEFRQGKVRTLVC 324
Query: 345 TDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
+DL+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 325 SDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLIN 373
>gi|401626351|gb|EJS44301.1| fal1p [Saccharomyces arboricola H-6]
Length = 399
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 142/366 (38%), Positives = 221/366 (60%), Gaps = 7/366 (1%)
Query: 45 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLST 104
SS F LK +LLR I GFE PS +Q I Q I G DVI QA+SG GKTA F +
Sbjct: 22 SSTFESMSLKDDLLRGIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTIGL 81
Query: 105 LQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIH-KDLLK 163
LQ + + AL+L TRELA QI Y+ ++ GG +K K + K
Sbjct: 82 LQAIDLRKKDLQALILSPTRELASQIGQVVTNLGDYM-NVNAYAMTGGKTLKDDLKKIQK 140
Query: 164 NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML-ESLDMRRDVQEIFKMTPHD 222
N C ++ GTPGR+L + + + L +NV+ +LDE D++L ++L ++ + +IF P +
Sbjct: 141 NGC-HVISGTPGRVLDMIKRQMLQTRNVQMLVLDEADELLSDTLGFKQQIYDIFTKLPKN 199
Query: 223 KQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLND 281
QV++ SAT++K+I V +KFM DP++I V + +++L G+ Q+ + + + E K L D
Sbjct: 200 CQVVVVSATMNKDILEVTRKFMNDPVKILVKRD-EISLEGIKQYVVNVDKEEWKFDTLCD 258
Query: 282 LLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRI 341
+ D+L Q VIF + + L++ L + NF + +H M QEER F+ G+ R+
Sbjct: 259 IYDSLTITQCVIFCNTKKKVDWLSQRLTQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRV 318
Query: 342 LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDIL 401
L++TD+ RGID+++V++VINYD+P+ + Y+HR+GR+GRFG KG+AI F++ +S L
Sbjct: 319 LISTDVWARGIDVQQVSLVINYDLPEIIENYIHRIGRSGRFGRKGVAINFITRI-NSTKL 377
Query: 402 NQVSKF 407
++ KF
Sbjct: 378 KEIEKF 383
>gi|303310497|ref|XP_003065260.1| ATP-dependent RNA helicase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240104922|gb|EER23115.1| ATP-dependent RNA helicase, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 510
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 152/394 (38%), Positives = 223/394 (56%), Gaps = 16/394 (4%)
Query: 1 MGETRDNEYEDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRA 60
+ + +DN E + ++E+ P T+ A KG F DF +K EL+
Sbjct: 9 LNKAKDNGAETK---WKEQLKLPPKDTRTQTEDVTATKGLE------FEDFYIKRELMMG 59
Query: 61 IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVL 120
I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++T P + AL+L
Sbjct: 60 IFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERTNPKISKTQALIL 119
Query: 121 CHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILA 179
TRELA Q + +L I V V GG ++ D+++ ++ I+VGTPGRIL
Sbjct: 120 VPTRELALQTSQVCKTLGKHL-GINVMVTTGGTGLQ--DDIIRLSDTVHIIVGTPGRILD 176
Query: 180 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 239
LA L F++DE DK+L S + ++++ P D+QVM+FSAT ++
Sbjct: 177 LASKGVADLSECTTFVMDEADKLL-SPEFTPVIEQLLSFHPKDRQVMLFSATFPMIVKSF 235
Query: 240 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 299
K M++P EI + DE LTL G+ Q+Y + E +K LN L L NQ +IF S +
Sbjct: 236 KDKHMRNPYEINLMDE--LTLRGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSTN 293
Query: 300 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNI 359
R L K + E + H+ M Q+ R + F+ G R LV +DL+ RGIDI+ VN+
Sbjct: 294 RVELLAKKITELGYSCFYSHARMLQQNRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNV 353
Query: 360 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 354 VINFDFPKNAETYLHRIGRSGRFGHLGLAINLIN 387
>gi|260945385|ref|XP_002616990.1| hypothetical protein CLUG_02434 [Clavispora lusitaniae ATCC 42720]
gi|238848844|gb|EEQ38308.1| hypothetical protein CLUG_02434 [Clavispora lusitaniae ATCC 42720]
Length = 397
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 146/355 (41%), Positives = 214/355 (60%), Gaps = 8/355 (2%)
Query: 41 VGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVF 100
V +H++ F LKPELL+ I GFE PS +Q I Q I G D I QA+SG GKTA F
Sbjct: 21 VKVHAT-FESMKLKPELLKGIYAYGFEAPSAIQSRAIMQIISGRDTIAQAQSGTGKTATF 79
Query: 101 VLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKD 160
+ LQ + N Q ALVL TRELA QI + TY+ +I GG ++ D
Sbjct: 80 SIGMLQAIDWNVRQCQALVLSPTRELAIQIHNVIRNLGTYM-NIHTHACIGGK--QVGDD 136
Query: 161 LLK-NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
L K N+ IV GTPGR+L + + ++L+ +NV+ ILDE D+++ + + + EI++
Sbjct: 137 LKKLNQGQHIVSGTPGRVLDVIKRRNLATRNVQMLILDEADELM-TKGFKEQIYEIYRHL 195
Query: 220 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRK 278
P QV++ SATL++E+ + KF DP++I V E +TL G+ Q++I+ + E K
Sbjct: 196 PSTVQVVVVSATLTREVLEITSKFTTDPVKILVKKE-DVTLEGIKQYHIQCEKEEWKFDT 254
Query: 279 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGN 338
L DL D+L Q VIF + S+ L L + NF +H M QEER + F+ GN
Sbjct: 255 LCDLYDSLTITQAVIFCNTKSKVNWLADQLRKANFAVSSMHGDMKQEERDSIMNDFRTGN 314
Query: 339 KRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
R+L++TD+ RGID+++V++VINYD+P + Y+HR+GR+GRFG KG+AI ++
Sbjct: 315 SRVLISTDVWARGIDVQQVSLVINYDLPLDKENYVHRIGRSGRFGRKGVAINLIT 369
>gi|156847065|ref|XP_001646418.1| hypothetical protein Kpol_2001p67 [Vanderwaltozyma polyspora DSM
70294]
gi|160380643|sp|A7TGU7.1|DHH1_VANPO RecName: Full=ATP-dependent RNA helicase DHH1
gi|156117094|gb|EDO18560.1| hypothetical protein Kpol_2001p67 [Vanderwaltozyma polyspora DSM
70294]
Length = 484
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 150/393 (38%), Positives = 220/393 (55%), Gaps = 22/393 (5%)
Query: 3 ETRDNEYEDEL-LDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAI 61
+ D +++ +L + ++ Q D ++TK N F DF LK ELL I
Sbjct: 4 QIEDQDWKSKLNIPKKDTRPQTEDVLSTKGNT--------------FEDFYLKRELLMGI 49
Query: 62 VDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLC 121
++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++ + ++ AL++
Sbjct: 50 FEAGFEKPSPIQEESIPVALAGRDILARAKNGTGKTAAFVIPTLEKVKSKHNKIQALIMV 109
Query: 122 HTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILAL 180
TRELA Q + I V GG N++ D+L+ NE I+VGTPGR+L L
Sbjct: 110 PTRELALQTSQVVRTLGKHC-GISCMVTTGGTNLR--DDILRLNETVHILVGTPGRVLDL 166
Query: 181 ARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
A K L FI+DE DKML S D + +++I P + Q ++FSAT ++
Sbjct: 167 ASRKVADLSECNLFIMDEADKML-SRDFKSIIEQILVFLPKNHQSLLFSATFPLSVKEFM 225
Query: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSR 300
+ P EI + DE LTL G+ Q+Y + E +K LN L L NQ +IF S +R
Sbjct: 226 VNHLHKPYEINLMDE--LTLKGITQYYAFVEEKQKLHCLNTLFSKLQINQAIIFCNSTNR 283
Query: 301 AAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIV 360
L K + + + H+ M Q+ER + F++G R LV +DL+ RGIDI+ VN+V
Sbjct: 284 VELLAKKITDLGYSCYYSHARMKQQERNRVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVV 343
Query: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
IN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 344 INFDFPKTAETYLHRIGRSGRFGHLGLAINLIN 376
>gi|14532476|gb|AAK63966.1| At2g45810/F4I18.21 [Arabidopsis thaliana]
gi|27363412|gb|AAO11625.1| At2g45810/F4I18.21 [Arabidopsis thaliana]
Length = 528
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 150/390 (38%), Positives = 222/390 (56%), Gaps = 33/390 (8%)
Query: 5 RDNEYEDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDS 64
RDN Y+ E D ATK N F D+LLK +LLR I +
Sbjct: 139 RDNRYQTE------------DVTATKGNE--------------FEDYLLKRDLLRGIYEK 172
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFE PS +Q E IP A+ G D++ +AK+G GKT F + TL++ +P + A++L TR
Sbjct: 173 GFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPTLEKIDPENNVIQAVILVPTR 232
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARD 183
ELA Q + S YL I+V V GG +++ D+++ P ++VGTPGRIL LA+
Sbjct: 233 ELALQTSQVCKELSKYL-KIEVMVTTGGTSLR--DDIMRLYQPVHLLVGTPGRILDLAKK 289
Query: 184 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF 243
LK+ ++DE DK+L S++ + ++E+ + P +Q++MFSAT ++ ++
Sbjct: 290 GVCVLKDCAMLVMDEADKLL-SVEFQPSIEELIQFLPESRQILMFSATFPVTVKSFKDRY 348
Query: 244 MQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAE 303
++ P I + D+ LTL G+ Q+Y + E +K LN L L NQ +IF SV+R
Sbjct: 349 LKKPYIINLMDQ--LTLMGVTQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVEL 406
Query: 304 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 363
L K + E + IH+ M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+
Sbjct: 407 LAKKITELGYSCFYIHAKMVQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINF 466
Query: 364 DMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
D P ++++YLHRVGR+GRFG GLA+ V+
Sbjct: 467 DFPRTSESYLHRVGRSGRFGHLGLAVNLVT 496
>gi|384493411|gb|EIE83902.1| ATP-dependent RNA helicase DHH1 [Rhizopus delemar RA 99-880]
Length = 523
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 152/393 (38%), Positives = 221/393 (56%), Gaps = 23/393 (5%)
Query: 4 TRDNEYEDELLDYEEED--AQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAI 61
+RDNE L ++D Q D ATK N F D+ LK ELL I
Sbjct: 7 SRDNENWKNTLALPQKDNRPQTEDVTATKGNE--------------FEDYFLKRELLMGI 52
Query: 62 VDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLC 121
++GFE PS +Q E IP A+ G D++ +AK+G GKTA F++ TL++ + ++ AL+L
Sbjct: 53 FEAGFEKPSPIQEEAIPLALAGRDILARAKNGTGKTAAFIIPTLEKINNSLSKIQALILV 112
Query: 122 HTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILAL 180
TRELA Q + +L +I+V V GG +K D+++ +E +VVGTPGRIL L
Sbjct: 113 PTRELALQTSQVCKTLGKHL-NIQVMVTTGGTTLK--DDIMRLSEPVHVVVGTPGRILDL 169
Query: 181 ARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
A F++DE DK+L S + ++++ P+++Q+M+FSAT ++
Sbjct: 170 ASKGVADFSTANTFVMDEADKLL-SPEFTPIIEQLLGYFPNNRQIMLFSATFPMVVKTFK 228
Query: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSR 300
KF+ P EI + DE LTL G+ Q+Y + E +K LN L L NQ +IF S +R
Sbjct: 229 DKFLIKPYEINLMDE--LTLRGVTQYYAYVEEKQKVHCLNTLFSKLQINQSIIFCNSTNR 286
Query: 301 AAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIV 360
L K + E + H+ M Q R + F+ G R LV +DL+ RGIDI+ VN+V
Sbjct: 287 VELLAKKITELGYSCFYSHAKMLQSHRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVV 346
Query: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
IN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 347 INFDFPKNAETYLHRIGRSGRFGHLGLAINLIT 379
>gi|323349512|gb|EGA83736.1| Fal1p [Saccharomyces cerevisiae Lalvin QA23]
gi|365766533|gb|EHN08029.1| Fal1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 399
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 144/366 (39%), Positives = 222/366 (60%), Gaps = 7/366 (1%)
Query: 45 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLST 104
S F LK +LLR I GFE PS +Q I Q I G DVI QA+SG GKTA F +
Sbjct: 22 SFTFESMNLKDDLLRGIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTIGL 81
Query: 105 LQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIH-KDLLK 163
LQ + + AL+L TRELA QI + Y+ ++ GG +K K + K
Sbjct: 82 LQAIDLRKKDLQALILSPTRELASQIGQVVKNLGDYM-NVNAFAITGGKTLKDDLKKMQK 140
Query: 164 NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML-ESLDMRRDVQEIFKMTPHD 222
+ C Q V GTPGR+L + + + L +NV+ +LDE D++L E+L ++ + +IF P +
Sbjct: 141 HGC-QAVSGTPGRVLDMIKRQMLQTRNVQMLVLDEADELLSETLGFKQQIYDIFAKLPKN 199
Query: 223 KQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLND 281
QV++ SAT++K+I V +KFM DP++I V + +++L G+ Q+ + + + E K L D
Sbjct: 200 CQVVVVSATMNKDILEVTRKFMNDPVKILVKRD-EISLEGIKQYVVNVDKEEWKFDTLCD 258
Query: 282 LLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRI 341
+ D+L Q VIF + + L++ L++ NF + +H M QEER F+ G+ R+
Sbjct: 259 IYDSLTITQCVIFCNTKKKVDWLSQRLIQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRV 318
Query: 342 LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDIL 401
L++TD+ RGID+++V++VINYD+P+ + Y+HR+GR+GRFG KG+AI F++ A D L
Sbjct: 319 LISTDVWARGIDVQQVSLVINYDLPEIIENYIHRIGRSGRFGRKGVAINFITKA-DLAKL 377
Query: 402 NQVSKF 407
++ KF
Sbjct: 378 REIEKF 383
>gi|126138430|ref|XP_001385738.1| RNA helicase of DEAD box family [Scheffersomyces stipitis CBS 6054]
gi|146286118|sp|A3LWX3.1|DHH1_PICST RecName: Full=ATP-dependent RNA helicase DHH1
gi|126093016|gb|ABN67709.1| RNA helicase of DEAD box family [Scheffersomyces stipitis CBS 6054]
Length = 509
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 144/347 (41%), Positives = 207/347 (59%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F DF LK ELL I ++GFE PS +Q E IP A+ G DV+ +AK+G GKTA F++ +LQQ
Sbjct: 32 FEDFNLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDVLARAKNGTGKTASFIIPSLQQ 91
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
+P ++ AL+L TRELA Q +L I+ V GG ++K D+L+ N+
Sbjct: 92 IKPKLNKIQALILVPTRELALQTSQVVRTLGKHL-GIQCMVTTGGTSLK--DDILRLNDP 148
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
++VGTPGR+L LA L F++DE DKML S + + +++I + P ++Q +
Sbjct: 149 VHVLVGTPGRVLDLAARSVADLSECPLFVMDEADKML-SREFKGIIEQILEFFPKNRQSL 207
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K + P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 208 LFSATFPLAVKSFMDKHLNKPYEINLMDE--LTLRGITQYYAFVEEKQKLHCLNTLFSKL 265
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q+ R + F++G R LV +D
Sbjct: 266 QINQSIIFCNSTNRVELLAKKITELGYSCYYSHAKMPQQARNKVFHEFRQGKVRNLVCSD 325
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI +S
Sbjct: 326 LLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLMS 372
>gi|326478704|gb|EGE02714.1| ATP-dependent RNA helicase DHH1 [Trichophyton equinum CBS 127.97]
Length = 441
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 152/390 (38%), Positives = 223/390 (57%), Gaps = 22/390 (5%)
Query: 6 DNEYEDEL-LDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDS 64
DN+++++L + ++ Q D ATK G+ F DF +K +L+ I ++
Sbjct: 20 DNKWKEQLKIPAKDTRVQTEDVTATK-----------GLE---FEDFYIKRDLMMGIFEA 65
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++T P + AL+L TR
Sbjct: 66 GFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERTNPKIAKTQALILVPTR 125
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARD 183
ELA Q + +L I V V GG ++ D+++ N+ I+VGTPGRIL LA
Sbjct: 126 ELALQTSQVCKTLGKHL-GINVMVTTGGTGLQ--DDIIRLNDTVHIIVGTPGRILDLASK 182
Query: 184 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF 243
L F++DE DK+L S + ++++ P D+QVM+FSAT ++ K
Sbjct: 183 GVADLSECTTFVMDEADKLL-SPEFTPVIEQLLTFHPKDRQVMLFSATFPIIVKTFKDKH 241
Query: 244 MQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAE 303
M++P EI + DE LTL G+ Q+Y + E +K LN L L NQ +IF S +R
Sbjct: 242 MRNPYEINLMDE--LTLRGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSTNRVEL 299
Query: 304 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 363
L K + E + H+ M Q R + F+ G R LV +DL+ RGIDI+ VN+VIN+
Sbjct: 300 LAKKITELGYSCFYSHARMLQHNRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINF 359
Query: 364 DMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 360 DFPKNAETYLHRIGRSGRFGHLGLAINLIN 389
>gi|307195782|gb|EFN77596.1| ATP-dependent RNA helicase WM6 [Harpegnathos saltator]
Length = 271
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 133/202 (65%), Positives = 149/202 (73%), Gaps = 25/202 (12%)
Query: 205 SLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLV 264
S DMRRDVQEIF+ TPH KQVMMFSATLSKEIRPVCKKFMQD
Sbjct: 65 SEDMRRDVQEIFRSTPHSKQVMMFSATLSKEIRPVCKKFMQD------------------ 106
Query: 265 QHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQ 324
E EKN+KL +LLD L+FNQVVIFVKSV R L +LL E NFP+I IH GM+Q
Sbjct: 107 -------ENEKNKKLFELLDVLEFNQVVIFVKSVQRCMALAQLLTEQNFPAIGIHRGMTQ 159
Query: 325 EERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGT 384
EERL+RY+ FK+ KRILVAT+L GRG+DIERVNIV NYDMP+ +DTYLHRV RAGRFGT
Sbjct: 160 EERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGT 219
Query: 385 KGLAITFVSSASDSDILNQVSK 406
KGLAIT VS SD+ ILN V +
Sbjct: 220 KGLAITLVSDESDAKILNDVQE 241
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 11 DELLDYE-EEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHP 69
D+LLDYE EE + PD + K YV IHSSGFRDFLLKPE+LRAIVD GFEHP
Sbjct: 5 DDLLDYEDEEQNEQPDGSGDVPAKKEVKGTYVSIHSSGFRDFLLKPEILRAIVDCGFEHP 64
Query: 70 SE 71
SE
Sbjct: 65 SE 66
>gi|357468259|ref|XP_003604414.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355505469|gb|AES86611.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 161
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 131/161 (81%), Positives = 136/161 (84%), Gaps = 20/161 (12%)
Query: 248 MEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKL 307
MEIYVDDEAKLTLHGLVQHYIKL E EKNR +VSRAAELNKL
Sbjct: 1 MEIYVDDEAKLTLHGLVQHYIKLQEPEKNR-------------------NVSRAAELNKL 41
Query: 308 LVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPD 367
LVECNFPSICIHSGMSQEERL RYKGFKEG +RILVATDLVGRGIDIERVNIVINYDMPD
Sbjct: 42 LVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPD 101
Query: 368 SADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV-SKF 407
SADTYLHRVGRAGRFGTKGLAITFVSSA DS++LNQV S+F
Sbjct: 102 SADTYLHRVGRAGRFGTKGLAITFVSSAGDSEVLNQVQSRF 142
>gi|327306565|ref|XP_003237974.1| ATP-dependent RNA helicase DHH1 [Trichophyton rubrum CBS 118892]
gi|326460972|gb|EGD86425.1| ATP-dependent RNA helicase DHH1 [Trichophyton rubrum CBS 118892]
Length = 508
Score = 257 bits (657), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 152/390 (38%), Positives = 223/390 (57%), Gaps = 22/390 (5%)
Query: 6 DNEYEDEL-LDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDS 64
DN+++++L + ++ Q D ATK G+ F DF +K +L+ I ++
Sbjct: 20 DNKWKEQLKIPAKDTRVQTEDVTATK-----------GLE---FEDFYIKRDLMMGIFEA 65
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++T P + AL+L TR
Sbjct: 66 GFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERTNPKIAKTQALILVPTR 125
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARD 183
ELA Q + +L I V V GG ++ D+++ N+ I+VGTPGRIL LA
Sbjct: 126 ELALQTSQVCKTLGKHL-GINVMVTTGGTGLQ--DDIIRLNDTVHIIVGTPGRILDLASK 182
Query: 184 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF 243
L F++DE DK+L S + ++++ P D+QVM+FSAT ++ K
Sbjct: 183 GVADLSECTTFVMDEADKLL-SPEFTPVIEQLLTFHPKDRQVMLFSATFPIIVKTFKDKH 241
Query: 244 MQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAE 303
M++P EI + DE LTL G+ Q+Y + E +K LN L L NQ +IF S +R
Sbjct: 242 MRNPYEINLMDE--LTLRGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSTNRVEL 299
Query: 304 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 363
L K + E + H+ M Q R + F+ G R LV +DL+ RGIDI+ VN+VIN+
Sbjct: 300 LAKKITELGYSCFYSHARMLQHNRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINF 359
Query: 364 DMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 360 DFPKNAETYLHRIGRSGRFGHLGLAINLIN 389
>gi|254584256|ref|XP_002497696.1| ZYRO0F11440p [Zygosaccharomyces rouxii]
gi|238940589|emb|CAR28763.1| ZYRO0F11440p [Zygosaccharomyces rouxii]
Length = 523
Score = 257 bits (657), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 141/347 (40%), Positives = 204/347 (58%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F DF LK ELL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++
Sbjct: 32 FEDFFLKRELLMGIFEAGFEKPSPIQEESIPVALAGRDILARAKNGTGKTAAFVIPTLEK 91
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
+P ++ AL++ TRELA Q + + V GG N++ D+L+ NE
Sbjct: 92 VKPKINKIQALIMVPTRELALQTSQVVRTLGKHC-GVSCMVTTGGTNLR--DDILRLNET 148
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
++VGTPGR+L LA K L F++DE DKML S D + +++I P Q +
Sbjct: 149 VHVLVGTPGRVLDLASRKVADLSECSLFVMDEADKML-SRDFKTIIEQILIFLPPQHQSL 207
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K + P EI + +E LTL G+ Q+Y + E +K LN L L
Sbjct: 208 LFSATFPITVKEFMVKHLHKPYEINLMEE--LTLKGITQYYAFVEERQKLHCLNTLFSKL 265
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + + + H+ M Q+ER + F++G R LV +D
Sbjct: 266 QVNQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMRQQERNKVFHEFRQGKVRTLVCSD 325
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 326 LLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLIN 372
>gi|320034926|gb|EFW16869.1| ATP-dependent RNA helicase dhh1 [Coccidioides posadasii str.
Silveira]
Length = 512
Score = 257 bits (657), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 149/379 (39%), Positives = 216/379 (56%), Gaps = 13/379 (3%)
Query: 16 YEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHE 75
++E+ P T+ A KG F DF +K EL+ I ++GFE PS +Q E
Sbjct: 23 WKEQLKLPPKDTRTQTEDVTATKGLE------FEDFYIKRELMMGIFEAGFEKPSPIQEE 76
Query: 76 CIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFE 135
IP A+ G D++ +AK+G GKTA FV+ TL++T P + AL+L TRELA Q +
Sbjct: 77 TIPVALTGRDILARAKNGTGKTAAFVIPTLERTNPKISKTQALILVPTRELALQTSQVCK 136
Query: 136 RFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKNVRHF 194
+L I V V GG ++ D+++ ++ I+VGTPGRIL LA L F
Sbjct: 137 TLGKHL-GINVMVTTGGTGLQ--DDIIRLSDTVHIIVGTPGRILDLASKGVADLSECTTF 193
Query: 195 ILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDD 254
++DE DK+L S + ++++ P D+QVM+FSAT ++ K M++P EI + D
Sbjct: 194 VMDEADKLL-SPEFTPVIEQLLSFHPKDRQVMLFSATFPMIVKSFKDKHMRNPYEINLMD 252
Query: 255 EAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFP 314
E LTL G+ Q+Y + E +K LN L L NQ +IF S +R L K + E +
Sbjct: 253 E--LTLRGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYS 310
Query: 315 SICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLH 374
H+ M Q+ R + F+ G R LV +DL+ RGIDI+ VN+VIN+D P +A+TYLH
Sbjct: 311 CFYSHARMLQQNRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLH 370
Query: 375 RVGRAGRFGTKGLAITFVS 393
R+GR+GRFG GLAI ++
Sbjct: 371 RIGRSGRFGHLGLAINLIN 389
>gi|119195455|ref|XP_001248331.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|118582181|sp|Q1E5R1.1|DHH1_COCIM RecName: Full=ATP-dependent RNA helicase DHH1
gi|392862437|gb|EAS36920.2| ATP-dependent RNA helicase DHH1 [Coccidioides immitis RS]
Length = 512
Score = 257 bits (657), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 149/379 (39%), Positives = 216/379 (56%), Gaps = 13/379 (3%)
Query: 16 YEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHE 75
++E+ P T+ A KG F DF +K EL+ I ++GFE PS +Q E
Sbjct: 23 WKEQLKLPPKDTRTQTEDVTATKGLE------FEDFYIKRELMMGIFEAGFEKPSPIQEE 76
Query: 76 CIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFE 135
IP A+ G D++ +AK+G GKTA FV+ TL++T P + AL+L TRELA Q +
Sbjct: 77 TIPVALTGRDILARAKNGTGKTAAFVIPTLERTNPKISKTQALILVPTRELALQTSQVCK 136
Query: 136 RFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKNVRHF 194
+L I V V GG ++ D+++ ++ I+VGTPGRIL LA L F
Sbjct: 137 TLGKHL-GINVMVTTGGTGLQ--DDIIRLSDTVHIIVGTPGRILDLASKGVADLSECTTF 193
Query: 195 ILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDD 254
++DE DK+L S + ++++ P D+QVM+FSAT ++ K M++P EI + D
Sbjct: 194 VMDEADKLL-SPEFTPVIEQLLSFHPKDRQVMLFSATFPMIVKSFKDKHMRNPYEINLMD 252
Query: 255 EAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFP 314
E LTL G+ Q+Y + E +K LN L L NQ +IF S +R L K + E +
Sbjct: 253 E--LTLRGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYS 310
Query: 315 SICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLH 374
H+ M Q+ R + F+ G R LV +DL+ RGIDI+ VN+VIN+D P +A+TYLH
Sbjct: 311 CFYSHARMLQQNRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLH 370
Query: 375 RVGRAGRFGTKGLAITFVS 393
R+GR+GRFG GLAI ++
Sbjct: 371 RIGRSGRFGHLGLAINLIN 389
>gi|297824637|ref|XP_002880201.1| hypothetical protein ARALYDRAFT_483719 [Arabidopsis lyrata subsp.
lyrata]
gi|297326040|gb|EFH56460.1| hypothetical protein ARALYDRAFT_483719 [Arabidopsis lyrata subsp.
lyrata]
Length = 521
Score = 257 bits (657), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 149/390 (38%), Positives = 222/390 (56%), Gaps = 33/390 (8%)
Query: 5 RDNEYEDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDS 64
RDN Y+ E D ATK N F D+ LK +LLR I +
Sbjct: 132 RDNRYQTE------------DVTATKGNE--------------FEDYFLKRDLLRGIYEK 165
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFE PS +Q E IP A+ G D++ +AK+G GKT F + TL++ +P + A++L TR
Sbjct: 166 GFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPTLEKIDPENNVIQAVILVPTR 225
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARD 183
ELA Q + S YL I+V V GG +++ D+++ P ++VGTPGRIL LA+
Sbjct: 226 ELALQTSQVCKELSKYL-KIEVMVTTGGTSLR--DDIMRLYQPVHLLVGTPGRILDLAKK 282
Query: 184 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF 243
LK+ ++DE DK+L S++ + ++E+ + P ++Q++MFSAT ++ ++
Sbjct: 283 GVCVLKDCAMLVMDEADKLL-SVEFQPSIEELIQFLPENRQILMFSATFPVTVKSFKDRY 341
Query: 244 MQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAE 303
++ P I + D+ LTL G+ Q+Y + E +K LN L L NQ +IF SV+R
Sbjct: 342 LRKPYIINLMDQ--LTLMGVTQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVEL 399
Query: 304 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 363
L K + E + IH+ M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+
Sbjct: 400 LAKKITELGYSCFYIHAKMVQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINF 459
Query: 364 DMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
D P ++++YLHRVGR+GRFG GLA+ V+
Sbjct: 460 DFPRTSESYLHRVGRSGRFGHLGLAVNLVT 489
>gi|323355798|gb|EGA87612.1| Fal1p [Saccharomyces cerevisiae VL3]
Length = 372
Score = 257 bits (657), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 142/358 (39%), Positives = 220/358 (61%), Gaps = 7/358 (1%)
Query: 53 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNP 112
LK +LLR I GFE PS +Q I Q I G DVI QA+SG GKTA F + LQ +
Sbjct: 3 LKDDLLRGIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTIGLLQAIDLRK 62
Query: 113 GQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIH-KDLLKNECPQIVV 171
+ AL+L TRELA QI + Y+ ++ GG +K K + K+ C Q V
Sbjct: 63 KDLQALILSPTRELASQIGQVVKNLGDYM-NVNAFAITGGKTLKDDLKKMQKHGC-QAVS 120
Query: 172 GTPGRILALARDKDLSLKNVRHFILDECDKML-ESLDMRRDVQEIFKMTPHDKQVMMFSA 230
GTPGR+L + + + L +NV+ +LDE D++L E+L ++ + +IF P + QV++ SA
Sbjct: 121 GTPGRVLDMIKRQMLQTRNVQMLVLDEADELLSETLGFKQQIYDIFAKLPKNCQVVVVSA 180
Query: 231 TLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFN 289
T++K+I V +KFM DP++I V + +++L G+ Q+ + + + E K L D+ D+L
Sbjct: 181 TMNKDILEVTRKFMNDPVKILVKRD-EISLEGIKQYVVNVDKEEWKFDTLCDIYDSLTIT 239
Query: 290 QVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVG 349
Q VIF + + L++ L++ NF + +H M QEER F+ G+ R+L++TD+
Sbjct: 240 QCVIFCNTKKKVDWLSQRLIQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRVLISTDVWA 299
Query: 350 RGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RGID+++V++VINYD+P+ + Y+HR+GR+GRFG KG+AI F++ A D L ++ KF
Sbjct: 300 RGIDVQQVSLVINYDLPEIIENYIHRIGRSGRFGRKGVAINFITKA-DLAKLREIEKF 356
>gi|315047704|ref|XP_003173227.1| ATP-dependent RNA helicase DHH1 [Arthroderma gypseum CBS 118893]
gi|311343613|gb|EFR02816.1| ATP-dependent RNA helicase DHH1 [Arthroderma gypseum CBS 118893]
Length = 508
Score = 257 bits (656), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 152/390 (38%), Positives = 223/390 (57%), Gaps = 22/390 (5%)
Query: 6 DNEYEDEL-LDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDS 64
DN+++++L + ++ Q D ATK G+ F DF +K +L+ I ++
Sbjct: 20 DNKWKEQLKIPAKDTRVQTEDVTATK-----------GLE---FEDFYIKRDLMMGIFEA 65
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++T P + AL+L TR
Sbjct: 66 GFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERTNPKIAKTQALILVPTR 125
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARD 183
ELA Q + +L I V V GG ++ D+++ N+ I+VGTPGRIL LA
Sbjct: 126 ELALQTSQVCKTLGKHL-GINVMVTTGGTGLQ--DDIIRLNDTVHIIVGTPGRILDLASK 182
Query: 184 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF 243
L F++DE DK+L S + ++++ P D+QVM+FSAT ++ K
Sbjct: 183 GVADLSECTTFVMDEADKLL-SPEFTPVIEQLLTFHPKDRQVMLFSATFPIIVKTFKDKH 241
Query: 244 MQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAE 303
M++P EI + DE LTL G+ Q+Y + E +K LN L L NQ +IF S +R
Sbjct: 242 MRNPYEINLMDE--LTLRGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSTNRVEL 299
Query: 304 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 363
L K + E + H+ M Q R + F+ G R LV +DL+ RGIDI+ VN+VIN+
Sbjct: 300 LAKKITELGYSCFYSHARMLQHNRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINF 359
Query: 364 DMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 360 DFPKNAETYLHRIGRSGRFGHLGLAINLIN 389
>gi|15225898|ref|NP_182105.1| DEAD-box ATP-dependent RNA helicase 6 [Arabidopsis thaliana]
gi|108861901|sp|Q94BV4.2|RH6_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 6
gi|3386613|gb|AAC28543.1| putative ATP-dependent RNA helicase [Arabidopsis thaliana]
gi|330255510|gb|AEC10604.1| DEAD-box ATP-dependent RNA helicase 6 [Arabidopsis thaliana]
Length = 528
Score = 257 bits (656), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 149/390 (38%), Positives = 221/390 (56%), Gaps = 33/390 (8%)
Query: 5 RDNEYEDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDS 64
RDN Y+ E D ATK N F D+ LK +LLR I +
Sbjct: 139 RDNRYQTE------------DVTATKGNE--------------FEDYFLKRDLLRGIYEK 172
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFE PS +Q E IP A+ G D++ +AK+G GKT F + TL++ +P + A++L TR
Sbjct: 173 GFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPTLEKIDPENNVIQAVILVPTR 232
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARD 183
ELA Q + S YL I+V V GG +++ D+++ P ++VGTPGRIL LA+
Sbjct: 233 ELALQTSQVCKELSKYL-KIEVMVTTGGTSLR--DDIMRLYQPVHLLVGTPGRILDLAKK 289
Query: 184 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF 243
LK+ ++DE DK+L S++ + ++E+ + P +Q++MFSAT ++ ++
Sbjct: 290 GVCVLKDCAMLVMDEADKLL-SVEFQPSIEELIQFLPESRQILMFSATFPVTVKSFKDRY 348
Query: 244 MQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAE 303
++ P I + D+ LTL G+ Q+Y + E +K LN L L NQ +IF SV+R
Sbjct: 349 LKKPYIINLMDQ--LTLMGVTQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVEL 406
Query: 304 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 363
L K + E + IH+ M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+
Sbjct: 407 LAKKITELGYSCFYIHAKMVQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINF 466
Query: 364 DMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
D P ++++YLHRVGR+GRFG GLA+ V+
Sbjct: 467 DFPRTSESYLHRVGRSGRFGHLGLAVNLVT 496
>gi|451855613|gb|EMD68905.1| hypothetical protein COCSADRAFT_277961 [Cochliobolus sativus
ND90Pr]
gi|452005056|gb|EMD97512.1| hypothetical protein COCHEDRAFT_1084860 [Cochliobolus
heterostrophus C5]
Length = 508
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 145/347 (41%), Positives = 205/347 (59%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F DF +K EL+ I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++
Sbjct: 51 FEDFFIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLER 110
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
P + AL+L TRELA Q ++ +L I V V GG +K D+++ N+
Sbjct: 111 VNPKSPKTQALILVPTRELALQTSQVCKQLGKHL-GINVMVSTGGTGLK--DDIIRLNDP 167
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
I+VGTPGRIL LA L + F++DE DK+L S + V+++ P D+QVM
Sbjct: 168 VHIIVGTPGRILDLAGKGVADLSACQTFVMDEADKLL-SPEFTPVVEQLLGFHPKDRQVM 226
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K M P EI + DE LTL G+ Q+Y + E +K LN L + L
Sbjct: 227 LFSATFPIVVKSFKDKHMNSPYEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFNKL 284
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q R + F+ G R LV +D
Sbjct: 285 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHARMLQHNRNRVFHDFRNGVCRNLVCSD 344
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 345 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLIN 391
>gi|145245621|ref|XP_001395078.1| ATP-dependent RNA helicase dhh1 [Aspergillus niger CBS 513.88]
gi|142981121|sp|A2QY39.1|DHH1_ASPNC RecName: Full=ATP-dependent RNA helicase dhh1
gi|134079784|emb|CAK40919.1| unnamed protein product [Aspergillus niger]
gi|358369026|dbj|GAA85641.1| ATP dependent RNA helicase [Aspergillus kawachii IFO 4308]
Length = 505
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 154/396 (38%), Positives = 222/396 (56%), Gaps = 23/396 (5%)
Query: 1 MGETRDNEYEDELLDYEEEDA--QAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELL 58
+G+ + E L+ +DA Q D ATK G+ F DF +K EL+
Sbjct: 14 LGDASSDAKWKEQLNVPAKDARPQTEDVTATK-----------GLE---FEDFYIKRELM 59
Query: 59 RAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTAL 118
I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++ P + AL
Sbjct: 60 MGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERINPKSTKTQAL 119
Query: 119 VLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRI 177
+L TRELA Q H + +L I V V GG + D+++ N+ I+VGTPGR+
Sbjct: 120 ILVPTRELALQTSHVCKTLGKHL-GINVMVTTGGTGLM--DDIIRLNDAVHILVGTPGRV 176
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
L LA L F++DE DK+L S + ++++ P D+QVM+FSAT ++
Sbjct: 177 LDLASKGVADLSECPTFVMDEADKLL-SPEFTPVIEQLLSFHPKDRQVMLFSATFPLIVK 235
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 297
K M++P EI + DE LTL G+ Q+Y + E +K LN L L NQ +IF S
Sbjct: 236 SFKDKHMRNPYEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFSKLQINQSIIFCNS 293
Query: 298 VSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERV 357
+R L K + E + H+ M Q+ R + F+ G R LV +DL+ RGIDI+ V
Sbjct: 294 TNRVELLAKKITELGYSCFYSHARMLQQHRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAV 353
Query: 358 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
N+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 354 NVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLIN 389
>gi|58265490|ref|XP_569901.1| RNA helicase [Cryptococcus neoformans var. neoformans JEC21]
gi|134108933|ref|XP_776581.1| hypothetical protein CNBC0740 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338818073|sp|P0CQ81.1|DHH1_CRYNB RecName: Full=ATP-dependent RNA helicase DHH1
gi|338818074|sp|P0CQ80.1|DHH1_CRYNJ RecName: Full=ATP-dependent RNA helicase DHH1
gi|50259261|gb|EAL21934.1| hypothetical protein CNBC0740 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226133|gb|AAW42594.1| RNA helicase, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 625
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 144/380 (37%), Positives = 216/380 (56%), Gaps = 12/380 (3%)
Query: 15 DYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQH 74
D+++ A P + + A +G S F DF L+ ELL I +GFE PS +Q
Sbjct: 11 DWKQGLAAPPKDLRPQTEDVTATQG------SRFEDFGLRRELLMGIYTAGFERPSPIQE 64
Query: 75 ECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEF 134
+ IP A+ G D++ +AK+G GKTA F++ TL + + + AL+L TRELA Q
Sbjct: 65 QAIPMALTGRDILARAKNGTGKTASFIIPTLNRINTSLSHIQALILVPTRELALQTSQVC 124
Query: 135 ERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKNVRH 193
+ ++P+++V + GG ++ D+L+ + P I+VGTPGRIL L SL
Sbjct: 125 KTLGAHIPNLQVMITTGGTTLR--DDILRLQQPVHILVGTPGRILDLGSKGIASLNKCGV 182
Query: 194 FILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVD 253
F++DE DK+L S D +++ + P ++QVM+FSAT ++ + M P EI +
Sbjct: 183 FVMDEADKLL-SEDFMPVIEQTLALCPQERQVMLFSATFPWTVKEFKDQHMVQPYEINLM 241
Query: 254 DEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNF 313
DE LTL G+ Q+Y + E +K LN L L NQ +IF S +R L K + E +
Sbjct: 242 DE--LTLKGVTQYYAYVEESQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKVTELGY 299
Query: 314 PSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYL 373
H+ M Q R + F+ G R LV +DL+ RGIDI+ VN+VIN+D P +A++YL
Sbjct: 300 SCFYSHAKMQQAHRNRVFHDFRNGMTRNLVCSDLLTRGIDIQAVNVVINFDFPRTAESYL 359
Query: 374 HRVGRAGRFGTKGLAITFVS 393
HR+GR+GRFG GLAI+ ++
Sbjct: 360 HRIGRSGRFGHLGLAISLLT 379
>gi|169779864|ref|XP_001824396.1| ATP-dependent RNA helicase dhh1 [Aspergillus oryzae RIB40]
gi|91206577|sp|Q2U5A2.1|DHH1_ASPOR RecName: Full=ATP-dependent RNA helicase dhh1
gi|83773136|dbj|BAE63263.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391868757|gb|EIT77967.1| ATP-dependent RNA helicase [Aspergillus oryzae 3.042]
Length = 511
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 154/396 (38%), Positives = 224/396 (56%), Gaps = 23/396 (5%)
Query: 1 MGE-TRDNEYEDEL-LDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELL 58
+GE + D ++D+L ++ Q D ATK G+ F DF +K EL+
Sbjct: 14 LGEASSDTRWKDQLKAPAKDARPQTEDVTATK-----------GLE---FEDFYIKRELM 59
Query: 59 RAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTAL 118
I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++ P + AL
Sbjct: 60 MGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERINPKSTKTQAL 119
Query: 119 VLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRI 177
+L TRELA Q H + +L I V V GG + D+++ N+ I+VGTPGR+
Sbjct: 120 ILVPTRELALQTSHVCKTLGKHL-GINVMVTTGGTGLM--DDIIRLNDAVHILVGTPGRV 176
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
L LA L F++DE DK+L S + ++++ P D+QVM+FSAT ++
Sbjct: 177 LDLASKGVADLSECPTFVMDEADKLL-SPEFTPVIEQLLSFHPKDRQVMLFSATFPLIVK 235
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 297
K M++P EI + DE LTL G+ Q+Y + E +K LN L L NQ +IF S
Sbjct: 236 SFKDKHMRNPYEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFSKLQINQSIIFCNS 293
Query: 298 VSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERV 357
+R L K + E + H+ M Q+ R + F+ G R LV +DL+ RGIDI+ V
Sbjct: 294 TNRVELLAKKITELGYSCFYSHARMLQQHRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAV 353
Query: 358 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
N+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 354 NVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLIN 389
>gi|115403005|ref|XP_001217579.1| hypothetical protein ATEG_08993 [Aspergillus terreus NIH2624]
gi|121734401|sp|Q0CBE1.1|DHH1_ASPTN RecName: Full=ATP-dependent RNA helicase dhh1
gi|114189425|gb|EAU31125.1| hypothetical protein ATEG_08993 [Aspergillus terreus NIH2624]
Length = 509
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 150/395 (37%), Positives = 220/395 (55%), Gaps = 8/395 (2%)
Query: 1 MGETRDNEYEDELLDYEEEDAQAPDSVATKA-NGEAAKKGYVGIHSSGFRDFLLKPELLR 59
M + ++ + L DA+ D + T A + + F DF +K EL+
Sbjct: 1 MADALASQLNNTSLGDANSDAKWKDQLKTPAKDARPQTEDVTATKGLEFEDFYIKRELMM 60
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++ P + AL+
Sbjct: 61 GIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERINPKSTKTQALI 120
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRIL 178
L TRELA Q H + +L I V V GG + D+++ N+ I+VGTPGR+L
Sbjct: 121 LVPTRELALQTSHVCKTLGKHL-GINVMVTTGGTGLM--DDIIRLNDAVHILVGTPGRVL 177
Query: 179 ALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRP 238
LA L F++DE DK+L S + ++++ P D+QVM+FSAT ++
Sbjct: 178 DLASKGVADLSECPTFVMDEADKLL-SPEFTPVIEQLLSFHPKDRQVMLFSATFPLIVKS 236
Query: 239 VCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSV 298
K M++P EI + DE LTL G+ Q+Y + E +K LN L L NQ +IF S
Sbjct: 237 FKDKHMRNPYEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFSKLQINQSIIFCNST 294
Query: 299 SRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVN 358
+R L K + E + H+ M Q+ R + F+ G R LV +DL+ RGIDI+ VN
Sbjct: 295 NRVELLAKKITELGYSCFYSHARMLQQHRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVN 354
Query: 359 IVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 355 VVINFDFPKNAETYLHRIGRSGRFGHLGLAINLIN 389
>gi|402080882|gb|EJT76027.1| ATP-dependent RNA helicase DHH1 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 539
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 144/347 (41%), Positives = 205/347 (59%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F DF LK +LL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ L++
Sbjct: 49 FEDFGLKRDLLMGIFEAGFEKPSPIQEESIPVALTGRDILARAKNGTGKTAAFVVPALEK 108
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
P ++ L+L TRELA Q + +L + V V GG ++ D+L+ + P
Sbjct: 109 INPKVSKIQCLILVPTRELAMQTSQVCKTLGKHL-GVNVMVTTGGTTLR--DDILRLQDP 165
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
IVVGTPGRIL LA L FI+DE DK+L S++ ++++ + P D+QVM
Sbjct: 166 VHIVVGTPGRILDLAGKNVADLSECPMFIMDEADKLL-SVEFTPVIEQLLQFHPKDRQVM 224
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K M DP EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 225 LFSATFPISVKDFSDKNMMDPYEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFSKL 282
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q+ R + F+ G R LV +D
Sbjct: 283 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHARMQQQARNRVFHDFRNGVCRNLVCSD 342
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GR+G GLAI ++
Sbjct: 343 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLIN 389
>gi|50303057|ref|XP_451466.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74660682|sp|Q6CX73.1|FAL1_KLULA RecName: Full=ATP-dependent RNA helicase FAL1
gi|49640597|emb|CAH03054.1| KLLA0A10659p [Kluyveromyces lactis]
Length = 398
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 139/351 (39%), Positives = 213/351 (60%), Gaps = 5/351 (1%)
Query: 45 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLST 104
S+ F LKP+LLR I GFE+PS +Q I Q I G DVI QA+SG GKTA F +
Sbjct: 22 SATFESMNLKPDLLRGIYFYGFEYPSSIQSRAISQIISGKDVIAQAQSGTGKTATFTIGL 81
Query: 105 LQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKN 164
LQ + ++ ALVL TRELA Q YL ++ GG ++ +
Sbjct: 82 LQAIDSKSKELQALVLSPTRELASQSESVISNLGDYL-NVTAHACTGGKALQQDIKKVSK 140
Query: 165 ECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML-ESLDMRRDVQEIFKMTPHDK 223
C Q+V GTPGR+L + + + L+++N + +LDE D++L E+L ++ + +IF P
Sbjct: 141 NC-QVVSGTPGRVLDMIKRQVLNVRNCKILVLDEADELLGETLGFKQQIYDIFTKLPPTI 199
Query: 224 QVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDL 282
QV++ SAT+SK+I + KKFM DP++I V + +++L + Q+Y+ + + E K L DL
Sbjct: 200 QVVVVSATMSKDILEITKKFMSDPVKILVKRD-EISLDVIKQYYVDVEKEEWKFDTLCDL 258
Query: 283 LDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRIL 342
D+L Q VIF + + L++ L + NF +H M QEER F+ G R+L
Sbjct: 259 YDSLTITQCVIFCNTRKKVDWLSRKLTQTNFSVSSMHGDMKQEERDQVMNDFRSGKARVL 318
Query: 343 VATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
++TD+ RGID++++++VINYD+PD+ + Y+HR+GR+GRFG KG+AI F++
Sbjct: 319 ISTDVWARGIDVQQISLVINYDIPDNLENYIHRIGRSGRFGRKGVAINFIT 369
>gi|367001570|ref|XP_003685520.1| hypothetical protein TPHA_0D04520 [Tetrapisispora phaffii CBS 4417]
gi|357523818|emb|CCE63086.1| hypothetical protein TPHA_0D04520 [Tetrapisispora phaffii CBS 4417]
Length = 502
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 144/347 (41%), Positives = 201/347 (57%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F DF LK ELL I ++GFE PS +Q E IP AI G D++ +AK+G GKTA FV+ TL++
Sbjct: 34 FEDFYLKRELLMGIFEAGFEKPSPIQEESIPVAIAGRDILARAKNGTGKTAAFVIPTLEK 93
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
+ ++ AL++ TRELA Q +I V GG N++ D+++ NE
Sbjct: 94 VKSKINKIQALIMVPTRELALQTSQVVRTLGKRC-EISCMVTTGGTNLR--DDIIRLNET 150
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
I+VGTPGR+L LA L FI+DE DKML S D + +++I P Q +
Sbjct: 151 VHILVGTPGRVLDLASRGIADLSGCGLFIMDEADKML-SRDFKSIIEQILTFLPEQHQSL 209
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K + P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 210 LFSATFPLTVKEFMVKHLHKPYEINLMDE--LTLKGITQYYAFVEEKQKLHCLNTLFSKL 267
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + + F H+ M Q+ER + F+ G R LV +D
Sbjct: 268 QINQAIIFCNSTNRVELLAKKITDLGFSCYYSHARMKQQERNRVFHEFRHGKVRTLVCSD 327
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 328 LLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLIN 374
>gi|310800761|gb|EFQ35654.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
Length = 530
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 143/347 (41%), Positives = 206/347 (59%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F +F LK +LL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ L++
Sbjct: 49 FENFQLKRDLLMGIFEAGFERPSPIQEEAIPVALTGRDILARAKNGTGKTAAFVIPALEK 108
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
P ++ AL+L TRELA Q + +L I V V GG ++ D+++ + P
Sbjct: 109 INPKVSKIQALILVPTRELAMQTSQVCKTLGKHL-GINVMVTTGGTGLR--DDIIRLQDP 165
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
IVVGTPGRIL LA L FI+DE DK+L S++ ++++ + P D+QVM
Sbjct: 166 VHIVVGTPGRILDLAGKNVADLSECSMFIMDEADKLL-SIEFTPVIEQLLQFHPKDRQVM 224
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K M P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 225 LFSATFPLSVKDFSDKNMVSPYEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFSKL 282
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M+Q+ R + F+ G R LV +D
Sbjct: 283 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMAQQARNRVFHDFRNGVCRNLVCSD 342
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GR+G GLAI ++
Sbjct: 343 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLIN 389
>gi|330932532|ref|XP_003303815.1| hypothetical protein PTT_16176 [Pyrenophora teres f. teres 0-1]
gi|311319958|gb|EFQ88104.1| hypothetical protein PTT_16176 [Pyrenophora teres f. teres 0-1]
Length = 512
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 145/347 (41%), Positives = 205/347 (59%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F DF +K EL+ I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++
Sbjct: 51 FEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLER 110
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
P + AL+L TRELA Q ++ +L +I V V GG +K D+++ P
Sbjct: 111 VNPKSPKTQALILVPTRELALQTSQVCKQLGKHL-NINVMVSTGGTGLK--DDIIRLSDP 167
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
I+VGTPGRIL LA L + F++DE DK+L S + V+++ P D+QVM
Sbjct: 168 VHIIVGTPGRILDLAGKGVADLSACQTFVMDEADKLL-SPEFTPVVEQLLGFHPKDRQVM 226
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K M P EI + DE LTL G+ Q+Y + E +K LN L + L
Sbjct: 227 LFSATFPIVVKSFKDKHMNSPYEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFNKL 284
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q R + F+ G R LV +D
Sbjct: 285 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHARMLQHNRNRVFHDFRNGVCRNLVCSD 344
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 345 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLIN 391
>gi|189194769|ref|XP_001933723.1| ATP-dependent RNA helicase DHH1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187979287|gb|EDU45913.1| ATP-dependent RNA helicase DHH1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 512
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 145/347 (41%), Positives = 205/347 (59%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F DF +K EL+ I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++
Sbjct: 51 FEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLER 110
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
P + AL+L TRELA Q ++ +L +I V V GG +K D+++ P
Sbjct: 111 VNPKSPKTQALILVPTRELALQTSQVCKQLGKHL-NINVMVSTGGTGLK--DDIIRLSDP 167
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
I+VGTPGRIL LA L + F++DE DK+L S + V+++ P D+QVM
Sbjct: 168 VHIIVGTPGRILDLAGKGVADLSACQTFVMDEADKLL-SPEFTPVVEQLLGFHPKDRQVM 226
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K M P EI + DE LTL G+ Q+Y + E +K LN L + L
Sbjct: 227 LFSATFPIVVKSFKDKHMNSPYEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFNKL 284
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q R + F+ G R LV +D
Sbjct: 285 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHARMLQHNRNRVFHDFRNGVCRNLVCSD 344
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 345 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLIN 391
>gi|367006737|ref|XP_003688099.1| hypothetical protein TPHA_0M00900 [Tetrapisispora phaffii CBS 4417]
gi|357526406|emb|CCE65665.1| hypothetical protein TPHA_0M00900 [Tetrapisispora phaffii CBS 4417]
Length = 400
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 144/357 (40%), Positives = 214/357 (59%), Gaps = 6/357 (1%)
Query: 45 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLST 104
++ F LK +LL+ + GFE PS +Q I Q I G DVI QA+SG GKTA F +
Sbjct: 23 TATFEAMDLKDDLLKGVYLYGFEAPSAIQSRAITQIISGTDVIAQAQSGTGKTATFTIGM 82
Query: 105 LQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIH-KDLLK 163
LQ + + AL+L TRELA QI Y+ +++ GG +K K + K
Sbjct: 83 LQVIDLKRKDLQALILSPTRELATQINQVVTNLGDYM-NVQSYAMTGGKTMKDDLKKMNK 141
Query: 164 NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML-ESLDMRRDVQEIFKMTPHD 222
+ C Q+V GTPGR+L + + + +S +NV+ ILDE D++L E L ++ + EIF P
Sbjct: 142 SGC-QVVSGTPGRVLDMIKRQLISTRNVQMLILDEADELLGEHLGFKQQIYEIFAKLPSA 200
Query: 223 KQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLS-ELEKNRKLND 281
QV++ SAT+SK+I V KKFM DP +I V + +++L G+ Q Y+ +S E K L D
Sbjct: 201 CQVVVVSATMSKDIIEVTKKFMSDPTKILVKRD-EISLEGIKQFYVNVSKEDWKFDTLCD 259
Query: 282 LLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRI 341
L D+L Q VIF + + L++ L NF I +H M QE+R F+ G R+
Sbjct: 260 LYDSLTITQCVIFCNTKKKVDWLSQKLTRSNFSVIAMHGDMKQEDRDKVMNDFRTGTSRV 319
Query: 342 LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDS 398
L++TD+ RGID+++V++VINYD+P++ + Y+HR+GR+GRFG KG++I FV+ S
Sbjct: 320 LISTDVWARGIDVQQVSLVINYDLPENMENYIHRIGRSGRFGRKGVSINFVTDEDSS 376
>gi|118362432|ref|XP_001014443.1| DEAD/DEAH box helicase family protein [Tetrahymena thermophila]
gi|89296210|gb|EAR94198.1| DEAD/DEAH box helicase family protein [Tetrahymena thermophila
SB210]
Length = 420
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 151/391 (38%), Positives = 217/391 (55%), Gaps = 15/391 (3%)
Query: 20 DAQAPDSVATKANGEAA-----KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQH 74
DAQ+ D +K N A + F D+ LK ELLR IV+ G++ PS VQ
Sbjct: 14 DAQSKDDWKSKVNKPAPDLRPKTTDVTATKGTDFEDYGLKIELLRGIVEKGWDKPSPVQE 73
Query: 75 ECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEF 134
E IP I G +I +AK+G GKTA FV+ L+Q + + +L+L TRELA Q+
Sbjct: 74 ETIPLTIAGSSIIARAKNGTGKTASFVIPILEQLDTTKNFIQSLILVPTRELALQVSSVA 133
Query: 135 ERFSTYLPDIKVAVFYGGVNIKIHKDLLK---NECP-QIVVGTPGRILALARDKDLSLKN 190
+ YL ++ V V GG + K +D+L+ E P I+V TPGRIL LA+ +L
Sbjct: 134 KELGKYL-NVNVMVSTGGTSFK--EDVLRLQNKESPVHIIVATPGRILDLAKKNIANLSQ 190
Query: 191 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 250
+ LDE DK+L S D ++EI + D+Q+M+FSAT ++ +K M D +
Sbjct: 191 CQIIALDEADKLL-SQDFVLIIEEILEFLKKDRQIMLFSATFPNSVKQFKEKHMADCKTV 249
Query: 251 YVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 310
+ DE LTL G+ Q+Y L E K + LN L L NQ +IF S R L ++E
Sbjct: 250 NMMDE--LTLKGVTQYYAYLEEKLKVQCLNHLAAKLQINQAIIFCNSTKRVELLANKIIE 307
Query: 311 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 370
+ IH+ M Q R + F +G R LV++DL RGID++ VN+VIN+D P +++
Sbjct: 308 QGYSCFYIHAKMEQHHRNKVFHNFTQGQGRFLVSSDLFTRGIDVQTVNVVINFDFPKNSE 367
Query: 371 TYLHRVGRAGRFGTKGLAITFVSSASDSDIL 401
TYLHR+GR+GRFG GLAI F++ +++
Sbjct: 368 TYLHRIGRSGRFGHLGLAINFITDEDKDNLI 398
>gi|344304932|gb|EGW35164.1| RNA helicase of DEAD box family [Spathaspora passalidarum NRRL
Y-27907]
Length = 517
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 143/347 (41%), Positives = 207/347 (59%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F DF LK ELL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ LQQ
Sbjct: 32 FEDFNLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDILARAKNGTGKTASFVIPCLQQ 91
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
+P ++ AL+L TRELA Q +L I+ V GG +++ D+++ N+
Sbjct: 92 VKPKVSKIQALILVPTRELALQTSQVVRTLGKHL-AIQCMVTTGGTSLR--DDIVRLNDP 148
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
++VGTPGR+L LA K + L F++DE DKML S + + +++I + P ++Q +
Sbjct: 149 VHVLVGTPGRVLDLAARKVVDLSECPVFVMDEADKML-SREFKGIIEQILEFFPPNRQAL 207
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K + P EI + DE LTL G+ Q Y + E +K LN L L
Sbjct: 208 LFSATFPLAVKSFMDKHLHKPYEINLMDE--LTLRGISQFYAFVEEKQKLHCLNTLFSKL 265
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q+ R + F++G R LV +D
Sbjct: 266 QINQSIIFCNSTNRVELLAKKITELGYSCYYSHAKMPQQARNKVFHEFRQGKVRNLVCSD 325
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI +S
Sbjct: 326 LLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLMS 372
>gi|116203955|ref|XP_001227788.1| hypothetical protein CHGG_09861 [Chaetomium globosum CBS 148.51]
gi|118582180|sp|Q2GQ93.1|DHH1_CHAGB RecName: Full=ATP-dependent RNA helicase DHH1
gi|88175989|gb|EAQ83457.1| hypothetical protein CHGG_09861 [Chaetomium globosum CBS 148.51]
Length = 512
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 144/356 (40%), Positives = 210/356 (58%), Gaps = 7/356 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F DF LK +LL I ++GFE PS +Q E IP A++G D++ +AK+G GKTA FV+ L++
Sbjct: 13 FEDFGLKRDLLMGIFEAGFEKPSPIQEESIPVALVGRDILARAKNGTGKTAAFVIPALEK 72
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
P ++ L+L TRELA Q + +L I V V GG ++ D+++ + P
Sbjct: 73 INPKVSKIQCLILVPTRELAMQTSQVCKTLGKHL-GINVMVTTGGTGLR--DDIVRLQDP 129
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
IVVGTPGRIL LA + L FI+DE DK+L S++ ++++ + P D+QVM
Sbjct: 130 VHIVVGTPGRILDLAGKQVADLSECPMFIMDEADKLL-SIEFTPVIEQLLRFHPKDRQVM 188
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K M P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 189 LFSATFPISVKDFSDKNMTSPYEINLMDE--LTLRGITQYYAYVEEKQKVHCLNTLFSKL 246
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M+Q+ R + F+ G R LV +D
Sbjct: 247 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMAQQARNRVFHDFRNGVCRNLVCSD 306
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILN 402
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GR+G GLAI ++ ++ N
Sbjct: 307 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLINWDDRFNLYN 362
>gi|118582182|sp|Q0U7S9.1|DHH1_PHANO RecName: Full=ATP-dependent RNA helicase DHH1
Length = 522
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 145/347 (41%), Positives = 203/347 (58%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F DF +K EL+ I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++
Sbjct: 51 FEDFFIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLER 110
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
P + AL+L TRELA Q + +L I V V GG +K D+++ P
Sbjct: 111 VNPKISKTQALILVPTRELALQTSQVCKTLGKHL-GINVMVSTGGTGLK--DDIIRLSDP 167
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
I+VGTPGRIL LA L + F++DE DK+L S + V+++ P D+QVM
Sbjct: 168 VHIIVGTPGRILDLAGKGVADLSTCQTFVMDEADKLL-SPEFTPVVEQLLGFHPKDRQVM 226
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K M P EI + DE LTL G+ Q+Y + E +K LN L + L
Sbjct: 227 LFSATFPIVVKTFKDKHMNSPYEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFNKL 284
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q R + F+ G R LV +D
Sbjct: 285 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHARMLQHNRNRVFHDFRNGVCRNLVCSD 344
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 345 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLIN 391
>gi|380493888|emb|CCF33553.1| ATP-dependent RNA helicase DHH1 [Colletotrichum higginsianum]
Length = 531
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 143/347 (41%), Positives = 206/347 (59%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F +F LK +LL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ L++
Sbjct: 49 FENFQLKRDLLMGIFEAGFERPSPIQEEAIPVALTGRDILARAKNGTGKTAAFVIPALEK 108
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
P ++ AL+L TRELA Q + +L I V V GG ++ D+++ + P
Sbjct: 109 INPKVSKIQALILVPTRELAMQTSQVCKTLGKHL-GINVMVTTGGTGLR--DDIIRLQDP 165
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
IVVGTPGRIL LA L FI+DE DK+L S++ ++++ + P D+QVM
Sbjct: 166 VHIVVGTPGRILDLAGKNVADLSECPMFIMDEADKLL-SIEFTPVIEQLLQFHPKDRQVM 224
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K M P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 225 LFSATFPLSVKDFSDKNMVSPYEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFSKL 282
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M+Q+ R + F+ G R LV +D
Sbjct: 283 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMAQQARNRVFHDFRNGVCRNLVCSD 342
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GR+G GLAI ++
Sbjct: 343 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLIN 389
>gi|156043018|ref|XP_001588066.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
gi|154695693|gb|EDN95431.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 535
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 204/356 (57%), Gaps = 7/356 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F DF +K +LL I +SGFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ L++
Sbjct: 49 FEDFSIKRDLLMGIFESGFEKPSPIQEEAIPVALTGRDILARAKNGTGKTAAFVIPALER 108
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
P +V L+L TRELA Q + +L + V V GG ++ D+++ P
Sbjct: 109 INPKSSKVQCLILVPTRELALQTSQVCKTLGQHL-GVNVMVTTGGTTLR--DDIMRLAEP 165
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
I+VGTPGRIL LA L FI+DE DK+L S + ++++ + P D+Q+M
Sbjct: 166 VHIIVGTPGRILDLAGKNVADLSECNMFIMDEADKLL-SPEFTIVIEQLLQFHPKDRQIM 224
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K M DP EI + DE LTL G+ Q Y + E EK LN L L
Sbjct: 225 LFSATFPMTVKDFSDKNMADPYEINLMDE--LTLRGITQFYAFVEEKEKVHCLNTLFSKL 282
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q R + F+ G R LV +D
Sbjct: 283 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHARMIQANRNRVFHDFRNGVCRNLVCSD 342
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILN 402
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI +S ++ N
Sbjct: 343 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLISWEDRFNLYN 398
>gi|429849688|gb|ELA25044.1| ATP dependent RNA helicase [Colletotrichum gloeosporioides Nara
gc5]
Length = 514
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 143/347 (41%), Positives = 206/347 (59%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F +F LK +LL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ L++
Sbjct: 49 FENFQLKRDLLMGIFEAGFEKPSPIQEEAIPVALTGRDILARAKNGTGKTAAFVIPALEK 108
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
P ++ AL+L TRELA Q + +L I V V GG ++ D+++ + P
Sbjct: 109 INPKVSKIQALILVPTRELAMQTSQVCKTLGKHL-GINVMVTTGGTGLR--DDIIRLQDP 165
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
IVVGTPGRIL LA L FI+DE DK+L S++ ++++ + P D+QVM
Sbjct: 166 VHIVVGTPGRILDLAGKNVADLSECPMFIMDEADKLL-SIEFTPVIEQLLQFHPKDRQVM 224
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K M P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 225 LFSATFPLSVKDFSDKNMVSPYEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFSKL 282
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M+Q+ R + F+ G R LV +D
Sbjct: 283 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMAQQARNRVFHDFRNGVCRNLVCSD 342
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GR+G GLAI ++
Sbjct: 343 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLIN 389
>gi|367031516|ref|XP_003665041.1| hypothetical protein MYCTH_2308335 [Myceliophthora thermophila ATCC
42464]
gi|347012312|gb|AEO59796.1| hypothetical protein MYCTH_2308335 [Myceliophthora thermophila ATCC
42464]
Length = 549
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 143/347 (41%), Positives = 205/347 (59%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F DF LK +LL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ L++
Sbjct: 49 FEDFGLKRDLLMGIFEAGFEKPSPIQEESIPVALTGRDILARAKNGTGKTAAFVIPALEK 108
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
P ++ L+L TRELA Q + +L I V V GG ++ D+++ + P
Sbjct: 109 INPKVSKIQCLILVPTRELAMQTSQVCKTLGKHL-GINVMVTTGGTGLR--DDIVRLQDP 165
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
IVVGTPGRIL LA + L FI+DE DK+L S + ++++ + P D+QVM
Sbjct: 166 VHIVVGTPGRILDLAGKQVADLSECPMFIMDEADKLL-SAEFTPVIEQLLRFHPKDRQVM 224
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K M P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 225 LFSATFPISVKDFADKNMSSPYEINLMDE--LTLRGITQYYAYVEEKQKVHCLNTLFSKL 282
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M+Q+ R + F+ G R LV +D
Sbjct: 283 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMAQQARNRVFHDFRNGVCRNLVCSD 342
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GR+G GLAI ++
Sbjct: 343 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLIN 389
>gi|74656036|sp|Q58Z64.1|DHH1_CRYNH RecName: Full=ATP-dependent RNA helicase VAD1; AltName:
Full=Virulence-associated DEAD box protein 1
gi|54873506|gb|AAV41010.1| virulence associated DEAD box protein 1 [Cryptococcus neoformans
var. grubii]
gi|55982655|gb|AAV69745.1| virulence-associated DEAD Box protein [Cryptococcus neoformans var.
grubii]
gi|405122977|gb|AFR97742.1| virulence-associated DEAD Box protein [Cryptococcus neoformans var.
grubii H99]
Length = 616
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 143/380 (37%), Positives = 215/380 (56%), Gaps = 12/380 (3%)
Query: 15 DYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQH 74
D+++ A P + + A +G S F DF L+ ELL I +GFE PS +Q
Sbjct: 11 DWKQGLAAPPKDLRPQTEDVTATQG------SRFEDFGLRRELLMGIYTAGFERPSPIQE 64
Query: 75 ECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEF 134
+ IP A+ G D++ +AK+G GKTA F++ TL + + + AL+L TRELA Q
Sbjct: 65 QAIPMALTGRDILARAKNGTGKTASFIIPTLNRINTSLSHIQALILVPTRELALQTSQVC 124
Query: 135 ERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKNVRH 193
+ ++P+++V + GG ++ D+L+ + P I+VGTPGRIL L L
Sbjct: 125 KTLGAHIPNLQVMITTGGTTLR--DDILRLQQPVHILVGTPGRILDLGSKGIAGLNKCGI 182
Query: 194 FILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVD 253
F++DE DK+L S D +++ + P ++QVM+FSAT ++ + M P EI +
Sbjct: 183 FVMDEADKLL-SEDFMPVIEQTLALCPQERQVMLFSATFPWTVKEFKDQHMVQPYEINLM 241
Query: 254 DEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNF 313
DE LTL G+ Q+Y + E +K LN L L NQ +IF S +R L K + E +
Sbjct: 242 DE--LTLKGVTQYYAYVEESQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKVTELGY 299
Query: 314 PSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYL 373
H+ M Q R + F+ G R LV +DL+ RGIDI+ VN+VIN+D P +A++YL
Sbjct: 300 SCFYSHAKMQQAHRNRVFHDFRNGMTRNLVCSDLLTRGIDIQAVNVVINFDFPRTAESYL 359
Query: 374 HRVGRAGRFGTKGLAITFVS 393
HR+GR+GRFG GLAI+ ++
Sbjct: 360 HRIGRSGRFGHLGLAISLLT 379
>gi|45185883|ref|NP_983599.1| ACR197Wp [Ashbya gossypii ATCC 10895]
gi|74694822|sp|Q75BS4.1|DHH1_ASHGO RecName: Full=ATP-dependent RNA helicase DHH1
gi|44981673|gb|AAS51423.1| ACR197Wp [Ashbya gossypii ATCC 10895]
gi|374106805|gb|AEY95714.1| FACR197Wp [Ashbya gossypii FDAG1]
Length = 484
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 141/347 (40%), Positives = 203/347 (58%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F DF L+ ELL I ++GFE PS +Q E IP A+ D++ +AK+G GKTA FV+ TL+
Sbjct: 31 FEDFYLRRELLMGIFEAGFERPSPIQEEAIPIALARRDILARAKNGTGKTAAFVIPTLEI 90
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
+P ++ AL++ TRELA Q + I V GG N++ D+++ NE
Sbjct: 91 VKPKVNKIQALIMVPTRELALQTSQVVRTLGKHC-GISCMVTTGGTNLR--DDIMRLNEP 147
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
++VGTPGR+L LA K L F++DE DKML S D + V++I P + Q +
Sbjct: 148 VHVLVGTPGRVLDLASRKVADLSECSLFVMDEADKML-SRDFKSLVEQILSFLPQNHQSL 206
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K + P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 207 LFSATFPLTVKEFMVKHLNKPYEINLMDE--LTLKGITQYYAFVEERQKLHCLNTLFSKL 264
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + + + H+ M Q+ER + F++G R LV +D
Sbjct: 265 QINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQERNKVFHEFRQGKVRTLVCSD 324
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 325 LLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLIN 371
>gi|259485547|tpe|CBF82660.1| TPA: ATP-dependent RNA helicase (Eurofung) [Aspergillus nidulans
FGSC A4]
Length = 498
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 142/347 (40%), Positives = 205/347 (59%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F DF +K EL+ I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++
Sbjct: 41 FEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLER 100
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
P + AL+L TRELA Q H + +L I V V GG + D+++ N+
Sbjct: 101 INPKSTKTQALILVPTRELALQTSHVCKTLGKHL-GINVMVTTGGTGLM--DDIIRLNDA 157
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
I+VGTPGR+L LA L F++DE DK+L S + ++++ P D+QVM
Sbjct: 158 VHILVGTPGRVLDLASKGVADLSECPTFVMDEADKLL-SPEFTPVIEQLLSFHPKDRQVM 216
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ + M++P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 217 LFSATFPMIVKSFKDRHMRNPYEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFSKL 274
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q+ R + F+ G R LV +D
Sbjct: 275 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHARMLQQHRNRVFHDFRNGVCRNLVCSD 334
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 335 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLIN 381
>gi|152013506|sp|Q6BJX6.2|DHH1_DEBHA RecName: Full=ATP-dependent RNA helicase DHH1
Length = 516
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 143/347 (41%), Positives = 203/347 (58%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F DF LK ELL I ++GFE PS VQ E IP A+ G D++ +AK+G GKTA FV+ LQQ
Sbjct: 32 FEDFPLKRELLMGIFEAGFEKPSPVQEESIPMALAGRDILARAKNGTGKTASFVIPCLQQ 91
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
P ++ AL+L TRELA Q +L ++ V GG +++ D+L+ N+
Sbjct: 92 ARPKVNKIQALILVPTRELALQTSQVVRTLGKHL-GLQCMVTTGGTSLR--DDILRLNDP 148
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
++VGTPGR+L LA K L F++DE DKML S + + +++I P +Q +
Sbjct: 149 VHVLVGTPGRVLDLASRKVADLSECPLFVMDEADKML-SREFKGIIEQILAFFPTTRQSL 207
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ + + P EI + DE LTL G+ Q Y + E +K LN L L
Sbjct: 208 LFSATFPLAVKSFMDQHLTKPYEINLMDE--LTLRGISQFYAFVEEKQKLHCLNTLFSKL 265
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q R + F++G R+LV +D
Sbjct: 266 QINQAIIFCNSTNRVELLAKKITELGYSCYYSHAKMPQHARNKVFHEFRQGKVRVLVCSD 325
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI +S
Sbjct: 326 LLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLMS 372
>gi|358385846|gb|EHK23442.1| hypothetical protein TRIVIDRAFT_147252 [Trichoderma virens Gv29-8]
Length = 490
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 144/347 (41%), Positives = 204/347 (58%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F +F LK +LL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ L++
Sbjct: 51 FENFALKRDLLMGIFEAGFEKPSPIQEEAIPVALTGRDILARAKNGTGKTAAFVIPALER 110
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
P ++ L+L TRELA Q + +L I V V GG ++ D+L+ + P
Sbjct: 111 INPKVSKIQCLILVPTRELAMQTSQVCKTLGKHL-GINVMVTTGGTGLR--DDILRLQEP 167
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
IVVGTPGRIL LA L FI+DE DK+L S++ ++++ + P D+QVM
Sbjct: 168 VHIVVGTPGRILDLAGKNVADLSECPMFIMDEADKLL-SIEFTPVIEQLLQFHPKDRQVM 226
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K M P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 227 LFSATFPLSVKDFSDKNMTSPYEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFSKL 284
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q+ R + F+ G R LV +D
Sbjct: 285 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHARMQQQARNRVFHDFRNGVCRNLVCSD 344
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 345 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLIN 391
>gi|402072782|gb|EJT68479.1| hypothetical protein GGTG_13947, partial [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 217
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 128/212 (60%), Positives = 156/212 (73%), Gaps = 15/212 (7%)
Query: 10 EDELLDYEEED-----AQAPDSVATKANGEAAKKG--------YVGIHSSGFRDFLLKPE 56
E++L+DY +E+ AP S + GE A G YVGIHS+GFRDFLLKPE
Sbjct: 4 EEDLIDYSDEELNTNETAAPASASNGKKGELAAGGNNVDKKGSYVGIHSTGFRDFLLKPE 63
Query: 57 LLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVT 116
LLRAI D GFEHPSEVQ CIPQA+LG D+ICQAKSG+GKTAVFVL+TLQQ EP G+ +
Sbjct: 64 LLRAIGDCGFEHPSEVQQTCIPQAMLGGDIICQAKSGLGKTAVFVLTTLQQVEPVAGECS 123
Query: 117 ALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTP 174
LV+CHTRELA+QI +E+ RFS Y+PDIK VF+GG I+ +LLKN+ P I+VGTP
Sbjct: 124 VLVMCHTRELAFQIRNEYTRFSKYMPDIKTGVFFGGTPIQKDAELLKNKDTHPHIIVGTP 183
Query: 175 GRILALARDKDLSLKNVRHFILDECDKMLESL 206
GR+ AL RDK L L +VR F+LDECDKML+ +
Sbjct: 184 GRLNALVRDKFLRLGSVRIFVLDECDKMLDQI 215
>gi|378731952|gb|EHY58411.1| ATP-dependent RNA helicase dhh1 [Exophiala dermatitidis NIH/UT8656]
Length = 506
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 152/395 (38%), Positives = 219/395 (55%), Gaps = 8/395 (2%)
Query: 1 MGETRDNEYEDELLDYEEEDAQAPDSVATKA-NGEAAKKGYVGIHSSGFRDFLLKPELLR 59
M ++ N+ L+ ED DS+ A + + F DF +K EL+
Sbjct: 1 MTDSLANQLNKTSLNDGAEDPNWKDSLNLPAKDSRQQTEDVTATKGLEFEDFYIKRELMM 60
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++ P + AL+
Sbjct: 61 GIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERINPKNPKTQALI 120
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRIL 178
L TRELA Q + +L I V V GG +K D+++ E I+VGTPGRIL
Sbjct: 121 LVPTRELALQTSQVCKTLGKHL-GINVMVTTGGTGLK--DDIIRLGEPVHIIVGTPGRIL 177
Query: 179 ALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRP 238
LA L F++DE DK+L S + ++++ P D+QVM+FSAT ++
Sbjct: 178 DLASKGVADLSECPIFVMDEADKLL-SPEFTVVIEQLLSFLPKDRQVMLFSATFPMIVKS 236
Query: 239 VCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSV 298
K M++P EI + DE LTL G+ Q+Y + E +K LN L L NQ +IF S
Sbjct: 237 FKDKHMRNPYEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFSKLQINQSIIFCNST 294
Query: 299 SRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVN 358
+R L K + E + H+ M Q+ R + F+ G R LV +DL+ RGIDI+ VN
Sbjct: 295 NRVELLAKKITELGYSCFYSHAKMLQQNRNKVFHDFRAGVCRNLVCSDLLTRGIDIQAVN 354
Query: 359 IVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 355 VVINFDFPKNAETYLHRIGRSGRFGHLGLAINLIN 389
>gi|212545060|ref|XP_002152684.1| DEAD-box RNA helicase Dhh1/Vad1, putative [Talaromyces marneffei
ATCC 18224]
gi|210065653|gb|EEA19747.1| DEAD-box RNA helicase Dhh1/Vad1, putative [Talaromyces marneffei
ATCC 18224]
Length = 498
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 153/395 (38%), Positives = 223/395 (56%), Gaps = 23/395 (5%)
Query: 1 MGETRDNEYEDEL-LDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLR 59
+GET D ++D+L + ++ Q D ATK G+ F DF +K EL+
Sbjct: 14 LGET-DGSWKDKLKIPAKDNRTQTEDVTATK-----------GLE---FEDFYIKRELMM 58
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA F++ TL++ P + AL+
Sbjct: 59 GIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFIIPTLERINPKSTKTQALI 118
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRIL 178
L TRELA Q + +L I V V GG + D+++ N+ I+VGTPGR+L
Sbjct: 119 LVPTRELALQTSQVCKTLGKHL-GINVMVTTGGTGLM--DDIIRLNDTVHIIVGTPGRVL 175
Query: 179 ALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRP 238
LA L F++DE DK+L S + ++++ P D+QVM+FSAT ++
Sbjct: 176 DLASKGVADLSECPTFVMDEADKLL-SPEFTPVIEQLLSFHPKDRQVMLFSATFPMIVKS 234
Query: 239 VCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSV 298
K M++P EI + DE LTL G+ Q+Y + E +K LN L L NQ +IF S
Sbjct: 235 FKDKHMRNPYEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFSKLQINQSIIFCNST 292
Query: 299 SRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVN 358
+R L K + E + H+ M Q R + F+ G R LV +DL+ RGIDI+ VN
Sbjct: 293 NRVELLAKKITELGYSCFYSHARMLQHNRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVN 352
Query: 359 IVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 353 VVINFDFPKNAETYLHRIGRSGRFGHLGLAINLIN 387
>gi|169618000|ref|XP_001802414.1| hypothetical protein SNOG_12185 [Phaeosphaeria nodorum SN15]
gi|160703529|gb|EAT80597.2| hypothetical protein SNOG_12185 [Phaeosphaeria nodorum SN15]
Length = 498
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 145/347 (41%), Positives = 203/347 (58%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F DF +K EL+ I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++
Sbjct: 27 FEDFFIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLER 86
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
P + AL+L TRELA Q + +L I V V GG +K D+++ P
Sbjct: 87 VNPKISKTQALILVPTRELALQTSQVCKTLGKHL-GINVMVSTGGTGLK--DDIIRLSDP 143
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
I+VGTPGRIL LA L + F++DE DK+L S + V+++ P D+QVM
Sbjct: 144 VHIIVGTPGRILDLAGKGVADLSTCQTFVMDEADKLL-SPEFTPVVEQLLGFHPKDRQVM 202
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K M P EI + DE LTL G+ Q+Y + E +K LN L + L
Sbjct: 203 LFSATFPIVVKTFKDKHMNSPYEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFNKL 260
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q R + F+ G R LV +D
Sbjct: 261 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHARMLQHNRNRVFHDFRNGVCRNLVCSD 320
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 321 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLIN 367
>gi|406604396|emb|CCH44161.1| ATP-dependent RNA helicase [Wickerhamomyces ciferrii]
Length = 570
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 142/349 (40%), Positives = 207/349 (59%), Gaps = 7/349 (2%)
Query: 46 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTL 105
+ F DF L +LL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA F++ L
Sbjct: 29 NSFEDFYLSRKLLMGIFEAGFEKPSPIQEESIPVALAGRDILARAKNGTGKTASFIIPVL 88
Query: 106 QQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE 165
++ +PN Q+ AL+L TRELA Q + L D+KV V GG +++ D+++ E
Sbjct: 89 EKIKPNVDQIQALILLPTRELALQTSQVVKTLGKRL-DVKVMVSTGGTSLR--DDIVRLE 145
Query: 166 CP-QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQ 224
P ++VGTPGRIL LA L F++DE DKML S + +R +++ P Q
Sbjct: 146 EPVNVLVGTPGRILDLASRNLADLSKCSMFVMDEADKML-SQEFKRIIEQTLSFLPSKHQ 204
Query: 225 VMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLD 284
++FSAT I+ + +++P EI + DE LTL G+ +Y L E +K L+ L
Sbjct: 205 SLLFSATFPLTIQDFIARNLKNPYEINLMDE--LTLRGITNYYAYLEEAQKLHCLHTLFS 262
Query: 285 ALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVA 344
L NQ +IF S R L K + + + H+ M Q+ R + F++G R LV
Sbjct: 263 KLQINQSIIFCNSSKRVELLAKKITQLGYSCYYSHAKMPQDARNKVFHEFRQGKVRNLVC 322
Query: 345 TDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
+DL+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI FV+
Sbjct: 323 SDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAIDFVT 371
>gi|326430178|gb|EGD75748.1| eIF-4a [Salpingoeca sp. ATCC 50818]
Length = 409
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 148/382 (38%), Positives = 218/382 (57%), Gaps = 13/382 (3%)
Query: 20 DAQAPDSVATKANGEA--AKKGYVGIHSS----GFRDFLLKPELLRAIVDSGFEHPSEVQ 73
+A+ D A A+G A A +G + + + F D LK ELLR I GFE PS +Q
Sbjct: 4 NAETSDKPAAPADGPANMAPEGEIESNWNEVVDNFDDMGLKAELLRGIYSYGFERPSAIQ 63
Query: 74 HECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHE 133
I G DVI QA+SG GKTA F +S LQ+ + + AL+L TRELA Q
Sbjct: 64 QRAIVPCTKGRDVIAQAQSGTGKTATFSVSVLQRIDTTRPECQALILAPTRELATQSLDV 123
Query: 134 FERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKNVR 192
E Y+ D+K GG ++ D+ K + Q++VGTPGR+ + L + N+
Sbjct: 124 LENLGQYM-DVKTMGCIGGT--RVQDDMAKLEQGVQVIVGTPGRVFHMINSGALDVSNLG 180
Query: 193 HFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYV 252
F+LDE D+ML S + +IF+ P D QV++ SAT+ ++ V K+FM+DP+ I V
Sbjct: 181 VFVLDEADEML-SFGFTDQIYDIFQTLPKDVQVILISATMPDDVLEVTKRFMRDPIRILV 239
Query: 253 DDEAKLTLHGLVQHYIKLS-ELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC 311
E +LTL G+ Q Y+ + E K L+D+ + +Q VIF + + L + L
Sbjct: 240 KKE-QLTLEGIRQFYVDVGKEDWKLETLSDIWKTITISQAVIFCNTRRKVDWLTEQLRAR 298
Query: 312 NFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADT 371
C H M+Q+ER K F+ G+ R+L+ TDL+ RGID+++V++VIN+D+P + +
Sbjct: 299 GHQVSCTHGDMTQDERNMIMKEFRAGSTRVLITTDLLARGIDVQQVSLVINFDLPSNREN 358
Query: 372 YLHRVGRAGRFGTKGLAITFVS 393
YLHR+GR+GRFG KG+AI FV+
Sbjct: 359 YLHRIGRSGRFGRKGVAINFVA 380
>gi|389637846|ref|XP_003716556.1| ATP-dependent RNA helicase DHH1 [Magnaporthe oryzae 70-15]
gi|374095382|sp|A4R715.2|DHH1_MAGO7 RecName: Full=ATP-dependent RNA helicase DHH1
gi|351642375|gb|EHA50237.1| ATP-dependent RNA helicase DHH1 [Magnaporthe oryzae 70-15]
gi|440465764|gb|ELQ35065.1| ATP-dependent RNA helicase DHH1 [Magnaporthe oryzae Y34]
gi|440489906|gb|ELQ69516.1| ATP-dependent RNA helicase DHH1 [Magnaporthe oryzae P131]
Length = 535
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 145/356 (40%), Positives = 207/356 (58%), Gaps = 7/356 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F +F LK +LL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ L+
Sbjct: 49 FENFGLKRDLLMGIFEAGFEKPSPIQEESIPVALTGRDILARAKNGTGKTAAFVVPALET 108
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
P ++ L+L TRELA Q + +L I V V GG ++ D+L+ + P
Sbjct: 109 INPKVSKIQCLILVPTRELAMQTSQVCKTLGKHL-GINVMVTTGGTTLR--DDILRLQDP 165
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
IVVGTPGRIL LA L FI+DE DK+L S++ ++++ + P D+QVM
Sbjct: 166 VHIVVGTPGRILDLAGKNVADLSECPMFIMDEADKLL-SIEFTPVIEQLLQFHPKDRQVM 224
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K M +P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 225 LFSATFPISVKEFSDKNMTNPYEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFSKL 282
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q+ R + F+ G R LV +D
Sbjct: 283 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMQQQARNRVFHDFRNGVCRNLVCSD 342
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILN 402
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GR+G GLAI +S ++ N
Sbjct: 343 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLISWEDRFNLYN 398
>gi|121704610|ref|XP_001270568.1| ATP dependent RNA helicase (Dhh1), putative [Aspergillus clavatus
NRRL 1]
gi|142981101|sp|A1CJ18.1|DHH1_ASPCL RecName: Full=ATP-dependent RNA helicase dhh1
gi|119398714|gb|EAW09142.1| ATP dependent RNA helicase (Dhh1), putative [Aspergillus clavatus
NRRL 1]
Length = 503
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 154/396 (38%), Positives = 220/396 (55%), Gaps = 23/396 (5%)
Query: 1 MGETRDNEYEDELLDYEEEDA--QAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELL 58
+GE E L+ +DA Q D ATK G+ F DF +K EL+
Sbjct: 14 LGEANSETKWKEQLNVPAKDARPQTEDVTATK-----------GLE---FEDFYIKRELM 59
Query: 59 RAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTAL 118
I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++ P + AL
Sbjct: 60 MGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERINPKSTKTQAL 119
Query: 119 VLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRI 177
+L TRELA Q + +L I V V GG + D+++ N+ I+VGTPGR+
Sbjct: 120 ILVPTRELALQTSQVCKTLGKHL-GINVMVTTGGTGLM--DDIIRLNDAVHILVGTPGRV 176
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
L LA L F++DE DK+L S + ++++ P D+QVM+FSAT ++
Sbjct: 177 LDLASKGVADLSECPTFVMDEADKLL-SPEFTPVIEQLLSFHPKDRQVMLFSATFPLIVK 235
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 297
K M++P EI + DE LTL G+ Q+Y + E +K LN L L NQ +IF S
Sbjct: 236 SFKDKHMRNPYEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFSKLQINQSIIFCNS 293
Query: 298 VSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERV 357
+R L K + E + H+ M Q+ R + F+ G R LV +DL+ RGIDI+ V
Sbjct: 294 TNRVELLAKKITELGYSCFYSHARMLQQHRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAV 353
Query: 358 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
N+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 354 NVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLIN 389
>gi|290989740|ref|XP_002677495.1| dead box ATP-dependent RNA helicase [Naegleria gruberi]
gi|284091103|gb|EFC44751.1| dead box ATP-dependent RNA helicase [Naegleria gruberi]
Length = 618
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 140/349 (40%), Positives = 211/349 (60%), Gaps = 7/349 (2%)
Query: 46 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTL 105
S F +F LK ELL I + GFE PS +Q + +P A+ G D++ +AK+G GKTA F++ L
Sbjct: 244 SDFEEFGLKRELLMGIFEKGFERPSPIQEQTVPLALFGRDILARAKNGTGKTAAFIIPCL 303
Query: 106 QQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE 165
++ + + Q+ L+L TRELA Q H + YL +++V V GG ++K D+++
Sbjct: 304 ERVDTSKNQIQILILVPTRELALQTSHVCKEIGKYL-NVEVMVTTGGTSLK--DDIVRLY 360
Query: 166 CP-QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQ 224
P I+VGTPGRI+ LA +L NV ++DE DK+L S + ++++ P +Q
Sbjct: 361 KPVHILVGTPGRIIDLASKGVANLNNVSMLVMDEADKLL-SPEFVPLIEKLISFVPPSRQ 419
Query: 225 VMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLD 284
+++FSAT ++ K++ P EI + DE LTL G+ Q+Y + E +K LN L
Sbjct: 420 ILLFSATFPITVKDFRDKWLTKPYEINLMDE--LTLKGVTQYYAFVEERQKVHCLNTLFS 477
Query: 285 ALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVA 344
L NQ +IF SV+R L K + E + IH+ M Q+ R + F+ G R LV+
Sbjct: 478 KLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMPQDLRNRVFHDFRNGACRNLVS 537
Query: 345 TDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
+DL RGIDI+ VN+VIN+D P +++TYLHR+GR+GR+G GLAI FV+
Sbjct: 538 SDLFTRGIDIQAVNVVINFDFPKNSETYLHRIGRSGRYGHLGLAINFVT 586
>gi|363752539|ref|XP_003646486.1| hypothetical protein Ecym_4646 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890121|gb|AET39669.1| hypothetical protein Ecym_4646 [Eremothecium cymbalariae
DBVPG#7215]
Length = 490
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 141/347 (40%), Positives = 202/347 (58%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F DF LK ELL I ++GFE PS +Q E IP A+ D++ +AK+G GKTA FV+ TL+
Sbjct: 32 FEDFYLKRELLMGIFEAGFEKPSPIQEEAIPIALTRRDILARAKNGTGKTAAFVIPTLEI 91
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
+P ++ AL++ TRELA Q + + V GG N++ D+++ NE
Sbjct: 92 VKPKVNKIQALIMVPTRELALQTSQVVRTLGKHC-GLSCMVTTGGTNLR--DDIMRLNEP 148
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
++VGTPGR+L LA K L FI+DE DKML S D + +++I P Q +
Sbjct: 149 VHVLVGTPGRVLDLASRKVADLSECSLFIMDEADKML-SRDFKSLIEQILSFLPSSHQSL 207
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K + P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 208 LFSATFPLTVKEFMVKHLNKPYEINLMDE--LTLKGITQYYAFVEERQKLHCLNTLFSKL 265
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + + + H+ M Q+ER + F++G R LV +D
Sbjct: 266 QINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQERNKVFHEFRQGKVRTLVCSD 325
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 326 LLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLIN 372
>gi|367048325|ref|XP_003654542.1| hypothetical protein THITE_2117632 [Thielavia terrestris NRRL 8126]
gi|347001805|gb|AEO68206.1| hypothetical protein THITE_2117632 [Thielavia terrestris NRRL 8126]
Length = 556
Score = 254 bits (649), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 143/347 (41%), Positives = 205/347 (59%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F DF LK +LL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ L++
Sbjct: 49 FEDFGLKRDLLMGIFEAGFEKPSPIQEESIPVALTGRDILARAKNGTGKTAAFVIPALEK 108
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
P ++ L+L TRELA Q + L I V V GG ++ D+++ + P
Sbjct: 109 INPKVSKIQCLILVPTRELAMQTSQVCKTLGKNL-GINVMVTTGGTGLR--DDIVRLQDP 165
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
IVVGTPGRIL LA + L FI+DE DK+L S++ ++++ + P D+QVM
Sbjct: 166 VHIVVGTPGRILDLASKQVADLSECPMFIMDEADKLL-SVEFTPVIEQLLQFHPKDRQVM 224
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K M P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 225 LFSATFPLSVKDFSDKNMVSPYEINLMDE--LTLRGITQYYAYVEEKQKVHCLNTLFSKL 282
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M+Q+ R + F+ G R LV +D
Sbjct: 283 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMAQQARNRVFHDFRNGACRNLVCSD 342
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GR+G GLAI ++
Sbjct: 343 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLIN 389
>gi|242814538|ref|XP_002486388.1| DEAD-box RNA helicase Dhh1/Vad1, putative [Talaromyces stipitatus
ATCC 10500]
gi|218714727|gb|EED14150.1| DEAD-box RNA helicase Dhh1/Vad1, putative [Talaromyces stipitatus
ATCC 10500]
Length = 502
Score = 254 bits (649), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 152/395 (38%), Positives = 223/395 (56%), Gaps = 23/395 (5%)
Query: 1 MGETRDNEYEDEL-LDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLR 59
+GET + ++D+L + ++ Q D ATK G+ F DF +K EL+
Sbjct: 14 LGET-EGSWKDQLKIPAKDNRTQTEDVTATK-----------GLE---FEDFYIKRELMM 58
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA F++ TL++ P + AL+
Sbjct: 59 GIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFIIPTLERINPKSTKTQALI 118
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRIL 178
L TRELA Q + +L I V V GG + D+++ N+ I+VGTPGR+L
Sbjct: 119 LVPTRELALQTSQVCKTLGKHL-GINVMVTTGGTGLM--DDIIRLNDTVHIIVGTPGRVL 175
Query: 179 ALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRP 238
LA L F++DE DK+L S + ++++ P D+QVM+FSAT ++
Sbjct: 176 DLASKGVADLSECPTFVMDEADKLL-SPEFTPVIEQLLSFHPKDRQVMLFSATFPMIVKS 234
Query: 239 VCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSV 298
K M++P EI + DE LTL G+ Q+Y + E +K LN L L NQ +IF S
Sbjct: 235 FKDKHMRNPYEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFSKLQINQSIIFCNST 292
Query: 299 SRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVN 358
+R L K + E + H+ M Q R + F+ G R LV +DL+ RGIDI+ VN
Sbjct: 293 NRVELLAKKITELGYSCFYSHARMLQHNRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVN 352
Query: 359 IVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 353 VVINFDFPKNAETYLHRIGRSGRFGHLGLAINLIN 387
>gi|396483789|ref|XP_003841790.1| similar to ATP-dependent RNA helicase dhh1 [Leptosphaeria maculans
JN3]
gi|312218365|emb|CBX98311.1| similar to ATP-dependent RNA helicase dhh1 [Leptosphaeria maculans
JN3]
Length = 511
Score = 254 bits (649), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 145/347 (41%), Positives = 203/347 (58%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F DF +K EL+ I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++
Sbjct: 52 FEDFFIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLER 111
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
P + AL+L TRELA Q + +L I V V GG +K D+++ P
Sbjct: 112 VNPKISKTQALILVPTRELALQTSQVCKMLGKHL-GINVMVSTGGTGLK--DDIIRLSDP 168
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
I+VGTPGRIL LA L + F++DE DK+L S + V+++ P D+QVM
Sbjct: 169 VHIIVGTPGRILDLAGKGVADLSACQTFVMDEADKLL-SPEFTPVVEQLLGFHPKDRQVM 227
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K M P EI + DE LTL G+ Q+Y + E +K LN L + L
Sbjct: 228 LFSATFPIVVKSFKDKHMNSPYEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFNKL 285
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q R + F+ G R LV +D
Sbjct: 286 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHARMLQHNRNRVFHDFRNGVCRNLVCSD 345
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 346 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLIN 392
>gi|302676323|ref|XP_003027845.1| hypothetical protein SCHCODRAFT_70659 [Schizophyllum commune H4-8]
gi|300101532|gb|EFI92942.1| hypothetical protein SCHCODRAFT_70659 [Schizophyllum commune H4-8]
Length = 459
Score = 254 bits (649), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 143/347 (41%), Positives = 207/347 (59%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F + L+ ELL I ++GFE PS +Q E IP+A+ D++ +AK+G GKTA FV+ TLQQ
Sbjct: 42 FENMYLRRELLMGIFEAGFEKPSPIQEEAIPKALQRRDILARAKNGTGKTAAFVIPTLQQ 101
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
+P ++ AL+L TRELA Q + ++ I+V V GG +K D+L+ NE
Sbjct: 102 VDPTKNKIQALLLVPTRELALQTSQVCKILGKHM-GIQVMVTTGGTTLK--DDILRLNET 158
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
++VGTPGRIL LA L F++DE DK+L S + ++++ P+D+QVM
Sbjct: 159 VHVLVGTPGRILDLAGKNVADLSQCPVFVMDEADKLL-SPEFAPVMEQLLSYLPNDRQVM 217
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ +K M +P EI + +E LTL G+ Q+Y + E +K LN L L
Sbjct: 218 LFSATFPMIVKDFKEKHMNNPYEINLMEE--LTLRGVTQYYAYVEERQKVHCLNTLFSKL 275
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q R + F+ G R LV +D
Sbjct: 276 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMLQSHRNRVFHDFRNGQCRNLVCSD 335
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +++TYLHR+GR+GRFG GLAI V+
Sbjct: 336 LLTRGIDIQAVNVVINFDFPKNSETYLHRIGRSGRFGHLGLAINLVT 382
>gi|403359120|gb|EJY79217.1| hypothetical protein OXYTRI_23511 [Oxytricha trifallax]
Length = 414
Score = 254 bits (649), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 144/355 (40%), Positives = 207/355 (58%), Gaps = 7/355 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F+DF L E+ I + GFE PS +Q E IP A+ ++I +AK+G GKTA + + +Q+
Sbjct: 42 FQDFGLSEEVQLGIYEMGFESPSPIQEETIPLALENKNIIARAKNGTGKTASYSIPIIQK 101
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
+ + Q+ ALVL TRELA Q + + I+ V GG ++K +D+ + +
Sbjct: 102 VDTSKNQIQALVLVPTRELAMQTSLVIKELGKH-KKIESMVSTGGTSVK--EDIYRLYQT 158
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
++VGTPGRIL LA +L+N + +LDE DK+L S+D + V I ++ P KQ+M
Sbjct: 159 VHVIVGTPGRILDLASKGVANLENCKMLVLDEVDKLL-SIDFKTIVARIIEIMPKSKQIM 217
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT EIR K++Q+ I+++ +LTL G+ Q+Y L E EK LN L L
Sbjct: 218 LFSATYPMEIREFQNKYIQEA--IFINLMEELTLKGVTQYYAYLEEREKLHCLNTLFSKL 275
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
+ NQ +IF S R L K + + IHS M Q +R Y FK G R LV TD
Sbjct: 276 EINQAIIFCNSAKRVELLAKKISHLGYSCFYIHSKMQQNDRNRIYHDFKAGETRCLVCTD 335
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDIL 401
L RGIDI VN+VIN+D P ++TYLHR+GR+GRFG GLAI F++ +++
Sbjct: 336 LFTRGIDIMSVNVVINFDFPKYSETYLHRIGRSGRFGHLGLAINFITEDDKTNLF 390
>gi|342882939|gb|EGU83503.1| hypothetical protein FOXB_05913 [Fusarium oxysporum Fo5176]
Length = 523
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 143/347 (41%), Positives = 204/347 (58%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F +F LK +LL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++
Sbjct: 51 FENFALKRDLLMGIFEAGFEKPSPIQEEAIPVALTGRDILARAKNGTGKTAAFVIPTLER 110
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
P ++ L+L TRELA Q + +L I V V GG ++ D+++ + P
Sbjct: 111 INPKVSKIQCLILVPTRELAMQTSQVCKTLGKHL-GINVMVTTGGTGLR--DDIIRLQDP 167
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
IVVGTPGRIL LA L FI+DE DK+L S++ ++++ + P D+QVM
Sbjct: 168 VHIVVGTPGRILDLAGKNVADLSECPMFIMDEADKLL-SIEFTPVIEQLLQFHPKDRQVM 226
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K M P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 227 LFSATFPLSVKDFSDKNMVSPYEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFSKL 284
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q R + F+ G R LV +D
Sbjct: 285 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMQQHARNRVFHDFRNGVCRNLVCSD 344
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GR+G GLAI ++
Sbjct: 345 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLIN 391
>gi|154313296|ref|XP_001555974.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
gi|160380642|sp|A6RY31.1|DHH1_BOTFB RecName: Full=ATP-dependent RNA helicase dhh1
gi|347827091|emb|CCD42788.1| hypothetical protein [Botryotinia fuckeliana]
Length = 538
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 204/356 (57%), Gaps = 7/356 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F DF +K ELL I + G+E PS +Q E IP A+ G D++ +AK+G GKTA FV+ L++
Sbjct: 49 FEDFSIKRELLMGIFEMGYEKPSPIQEEAIPVALTGRDILARAKNGTGKTAAFVIPALER 108
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
P +V L+L TRELA Q + +L I V V GG ++ D+L+ + P
Sbjct: 109 INPKNTKVQCLILVPTRELALQTSQVCKTLGQHL-GINVMVTTGGTTLR--DDILRLQEP 165
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
I+VGTPGRIL LA L F++DE DK+L S + ++++ + P D+Q+M
Sbjct: 166 VHIIVGTPGRILDLAGKNVADLSECNMFVMDEADKLL-SPEFTIVIEQLLQFHPKDRQIM 224
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K M DP EI + DE LTL G+ Q Y + E EK LN L L
Sbjct: 225 LFSATFPMTVKDFSDKNMADPYEINLMDE--LTLRGITQFYAFVEEKEKVHCLNTLFSKL 282
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q R + F+ G R LV +D
Sbjct: 283 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHARMIQANRNRVFHDFRNGVCRNLVCSD 342
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILN 402
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI +S ++ N
Sbjct: 343 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLISWEDRFNLYN 398
>gi|407848958|gb|EKG03862.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma cruzi]
Length = 406
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 139/376 (36%), Positives = 219/376 (58%), Gaps = 6/376 (1%)
Query: 19 EDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIP 78
ED + +A K + + + F ++ L+ EL I + GFE PS VQ E IP
Sbjct: 4 EDDWKKNLLAPKKDTRKKTEDVESRRNVTFEEYGLRRELQMGIFEKGFERPSPVQEEAIP 63
Query: 79 QAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFS 138
A+ G DV+ +AK+G GKTA FV+ L++ + + AL++ TRELA Q +
Sbjct: 64 VALQGKDVLARAKNGTGKTASFVIPVLEKVDTREPHIQALLMVPTRELALQTAQVTKELG 123
Query: 139 TYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKNVRHFILD 197
++ ++V V GG ++ D+L+ + P ++V TPGR++ LA + L R +LD
Sbjct: 124 KHISGLEVMVTTGGTTLR--DDILRLQNPVHVLVATPGRVVDLASKRTAKLDRCRIIVLD 181
Query: 198 ECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAK 257
E DK+L S + +++++ P D+Q ++FSAT ++ +++++P EI + +E
Sbjct: 182 EADKLL-SQEFTELIEDLYTYLPADRQSLLFSATFPVTVKDFADRYLRNPYEINLMEE-- 238
Query: 258 LTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSIC 317
LTL G+ Q+Y+ + E +K LN L + L NQ +IF SV+R L K + + +
Sbjct: 239 LTLRGVTQYYVFVEERQKIHCLNTLFNRLQINQSIIFCNSVNRVELLAKKITQLGYSCYY 298
Query: 318 IHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 377
IH+ M Q+ R + F+EG+ R LV +DL+ RGIDI+ VN+VIN+D P A+TYLHR+G
Sbjct: 299 IHARMQQQHRNRVFHDFREGHCRNLVCSDLITRGIDIQAVNVVINFDFPKYAETYLHRIG 358
Query: 378 RAGRFGTKGLAITFVS 393
R+GRFG GLAI FV+
Sbjct: 359 RSGRFGHLGLAINFVT 374
>gi|171681521|ref|XP_001905704.1| hypothetical protein [Podospora anserina S mat+]
gi|170940719|emb|CAP65947.1| unnamed protein product [Podospora anserina S mat+]
Length = 540
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 144/356 (40%), Positives = 207/356 (58%), Gaps = 7/356 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F DF LK LL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ LQ+
Sbjct: 33 FEDFGLKRSLLMGIFEAGFEKPSPIQEESIPVALTGRDILARAKNGTGKTAAFVIPALQK 92
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
P ++ L+L TRELA Q + +L + V V GG ++ D+++ + P
Sbjct: 93 INPKINKIQCLILVPTRELAMQTSQVCKTLGKHL-GVNVMVTTGGTGLR--DDIVRLQDP 149
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
IVVGTPGRIL LA + L FI+DE DK+L S + ++++ + P D+QVM
Sbjct: 150 VHIVVGTPGRILDLAGKQVADLSECPMFIMDEADKLL-SAEFTPVIEQLLQFHPKDRQVM 208
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K M++P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 209 LFSATFPISVKDFSDKNMKEPYEINLMDE--LTLRGITQYYAYVEEKQKVHCLNTLFSKL 266
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q R + F+ G R LV +D
Sbjct: 267 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMQQHARNRVFHDFRNGVCRNLVCSD 326
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILN 402
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GR+G GLAI ++ ++ N
Sbjct: 327 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLINWDDRFNLYN 382
>gi|71650885|ref|XP_814131.1| ATP-dependent DEAD/H RNA helicase [Trypanosoma cruzi strain CL
Brener]
gi|70879078|gb|EAN92280.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma cruzi]
Length = 406
Score = 254 bits (648), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 139/376 (36%), Positives = 219/376 (58%), Gaps = 6/376 (1%)
Query: 19 EDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIP 78
ED + +A K + + + F ++ L+ EL I + GFE PS VQ E IP
Sbjct: 4 EDDWKKNLLAPKKDTRKKTEDVESRRNVTFEEYGLRRELQMGIFEKGFERPSPVQEEAIP 63
Query: 79 QAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFS 138
A+ G DV+ +AK+G GKTA FV+ L++ + + AL++ TRELA Q +
Sbjct: 64 VALQGKDVLARAKNGTGKTASFVIPVLEKVDTREPHIQALLMVPTRELALQTAQVTKELG 123
Query: 139 TYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKNVRHFILD 197
++ ++V V GG ++ D+L+ + P ++V TPGR++ LA + L R +LD
Sbjct: 124 KHISGLEVMVTTGGTTLR--DDILRLQNPVHVLVATPGRVVDLASKRTAKLDRCRIIVLD 181
Query: 198 ECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAK 257
E DK+L S + +++++ P D+Q ++FSAT ++ +++++P EI + +E
Sbjct: 182 EADKLL-SQEFTELIEDLYTYLPADRQSLLFSATFPVTVKDFADRYLRNPYEINLMEE-- 238
Query: 258 LTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSIC 317
LTL G+ Q+Y+ + E +K LN L + L NQ +IF SV+R L K + + +
Sbjct: 239 LTLRGVTQYYVFVEERQKIHCLNTLFNRLQINQSIIFCNSVNRVELLAKKITQLGYSCYY 298
Query: 318 IHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 377
IH+ M Q+ R + F+EG+ R LV +DL+ RGIDI+ VN+VIN+D P A+TYLHR+G
Sbjct: 299 IHARMQQQHRNRVFHDFREGHCRNLVCSDLITRGIDIQAVNVVINFDFPKYAETYLHRIG 358
Query: 378 RAGRFGTKGLAITFVS 393
R+GRFG GLAI FV+
Sbjct: 359 RSGRFGHLGLAINFVT 374
>gi|119493424|ref|XP_001263902.1| ATP dependent RNA helicase (Dhh1), putative [Neosartorya fischeri
NRRL 181]
gi|142981160|sp|A1D8G1.1|DHH1_NEOFI RecName: Full=ATP-dependent RNA helicase dhh1
gi|119412062|gb|EAW22005.1| ATP dependent RNA helicase (Dhh1), putative [Neosartorya fischeri
NRRL 181]
Length = 507
Score = 253 bits (647), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 154/396 (38%), Positives = 220/396 (55%), Gaps = 23/396 (5%)
Query: 1 MGETRDNEYEDELLDYEEEDA--QAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELL 58
+GE E L+ +DA Q D ATK G+ F DF +K EL+
Sbjct: 14 LGEANSEMRWREQLNMPAKDARPQTEDVTATK-----------GLE---FEDFYIKRELM 59
Query: 59 RAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTAL 118
I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++ P + AL
Sbjct: 60 MGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERINPKSTKTQAL 119
Query: 119 VLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRI 177
+L TRELA Q + +L I V V GG + D+++ N+ I+VGTPGR+
Sbjct: 120 ILVPTRELALQTSQVCKTLGKHL-GINVMVTTGGTGLM--DDIIRLNDAVHILVGTPGRV 176
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
L LA L F++DE DK+L S + ++++ P D+QVM+FSAT ++
Sbjct: 177 LDLASKGVADLSECPTFVMDEADKLL-SPEFTPVIEQLLSFHPKDRQVMLFSATFPLIVK 235
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 297
K M++P EI + DE LTL G+ Q+Y + E +K LN L L NQ +IF S
Sbjct: 236 SFKDKHMRNPYEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFSKLQINQSIIFCNS 293
Query: 298 VSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERV 357
+R L K + E + H+ M Q+ R + F+ G R LV +DL+ RGIDI+ V
Sbjct: 294 TNRVELLAKKITELGYSCFYSHARMLQQHRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAV 353
Query: 358 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
N+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 354 NVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLIN 389
>gi|321252954|ref|XP_003192576.1| RNA helicase [Cryptococcus gattii WM276]
gi|317459045|gb|ADV20789.1| RNA helicase, putative [Cryptococcus gattii WM276]
Length = 615
Score = 253 bits (647), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 138/354 (38%), Positives = 204/354 (57%), Gaps = 6/354 (1%)
Query: 41 VGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVF 100
S F DF L+ ELL I +GFE PS +Q + IP A+ G D++ +AK+G GKTA F
Sbjct: 31 TATQGSRFEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALTGRDILARAKNGTGKTASF 90
Query: 101 VLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKD 160
++ TL + + + AL+L TRELA Q + ++P+++V + GG ++ D
Sbjct: 91 IIPTLNRINTSLSHIQALILVPTRELALQTSQVCKTLGAHIPNLQVMITTGGTTLR--DD 148
Query: 161 LLKNECP-QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
+L+ + P I+VGTPGRIL L L F++DE DK+L S D +++ +
Sbjct: 149 ILRLQQPVHILVGTPGRILDLGSKGIAGLNKCSIFVMDEADKLL-SEDFMPVIEQTLALC 207
Query: 220 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKL 279
P ++QVM+FSAT ++ + M P EI + DE LTL G+ Q+Y + E +K L
Sbjct: 208 PQERQVMLFSATFPWTVKEFKDQHMVQPYEINLMDE--LTLKGVTQYYAYVEESQKVHCL 265
Query: 280 NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNK 339
N L L NQ +IF S +R L K + E + H+ M Q R + F+ G
Sbjct: 266 NTLFSKLQINQSIIFCNSTNRVELLAKKVTELGYSCFYSHAKMQQAHRNRVFHDFRNGMT 325
Query: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
R LV +DL+ RGIDI+ VN+VIN+D P +A++YLHR+GR+GRFG GLAI+ ++
Sbjct: 326 RNLVCSDLLTRGIDIQAVNVVINFDFPRTAESYLHRIGRSGRFGHLGLAISLLT 379
>gi|407409542|gb|EKF32325.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma cruzi
marinkellei]
Length = 406
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 135/347 (38%), Positives = 210/347 (60%), Gaps = 6/347 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F ++ L+ EL I + GFE PS VQ E IP A+ G DV+ +AK+G GKTA FV+ L++
Sbjct: 33 FEEYGLRRELQMGIFEKGFERPSPVQEEAIPVALQGKDVLARAKNGTGKTASFVIPVLEK 92
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ + AL++ TRELA Q + ++ ++V V GG ++ D+L+ + P
Sbjct: 93 VDTREPHIQALLMVPTRELALQTAQVTKELGKHISGLEVMVTTGGTTLR--DDILRLQNP 150
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
++V TPGR++ LA + L R +LDE DK+L S + +++++ P D+Q +
Sbjct: 151 VHVLVATPGRVVDLASKRTAKLDRCRIIVLDEADKLL-SQEFTELIEDLYTYLPADRQSL 209
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ +++++P EI + +E LTL G+ Q+Y+ + E +K LN L + L
Sbjct: 210 LFSATFPVTVKDFADRYLRNPYEINLMEE--LTLRGVTQYYVFVEERQKIHCLNTLFNRL 267
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF SV+R L K + + + IH+ M Q+ R + F+EG+ R LV +D
Sbjct: 268 QINQSIIFCNSVNRVELLAKKITQLGYSCYYIHARMQQQHRNRVFHDFREGHCRNLVCSD 327
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P A+TYLHR+GR+GRFG GLAI FV+
Sbjct: 328 LITRGIDIQAVNVVINFDFPKYAETYLHRIGRSGRFGHLGLAINFVT 374
>gi|320590896|gb|EFX03337.1| ATP dependent RNA helicase [Grosmannia clavigera kw1407]
Length = 530
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 142/347 (40%), Positives = 204/347 (58%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F +F LK +LL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ L++
Sbjct: 49 FEEFGLKRDLLMGIFEAGFEKPSPIQEESIPVALTGRDILARAKNGTGKTAAFVIPALEK 108
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
P ++ L+L TRELA Q + +L +I V V GG ++ D+++ E
Sbjct: 109 INPKVSKIQCLILVPTRELAMQTSQVCKSLGKHL-NINVMVTTGGTGLR--DDIVRLQEA 165
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
IVVGTPGRIL LA L FI+DE DK+L S + ++++ + P D+QVM
Sbjct: 166 VHIVVGTPGRILDLASKNVADLSECPMFIMDEADKLL-SAEFTPVIEQLLQFHPKDRQVM 224
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K M P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 225 LFSATFPLSVKDFSDKNMVSPYEINLMDE--LTLRGITQYYAFVEERQKVHCLNTLFSKL 282
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M+Q+ R + F+ G R LV +D
Sbjct: 283 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMAQQARNRVFHDFRNGVCRNLVCSD 342
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GR+G GLAI ++
Sbjct: 343 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLIN 389
>gi|443894078|dbj|GAC71428.1| ATP-dependent RNA helicase [Pseudozyma antarctica T-34]
Length = 184
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 118/165 (71%), Positives = 140/165 (84%), Gaps = 1/165 (0%)
Query: 244 MQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAE 303
M P+EIYVDDE KLTLHGL QHY++L E KNRKLNDLLD+L+FNQV+IFVKS+SRA E
Sbjct: 1 MMQPLEIYVDDETKLTLHGLQQHYVRLEESAKNRKLNDLLDSLEFNQVIIFVKSISRANE 60
Query: 304 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 363
L+KLL ECNFPSICIH G++QEER+ RY+ FK KRILVATD+ GRGID+ERVN+ I+Y
Sbjct: 61 LDKLLRECNFPSICIHGGLAQEERIKRYQQFKNFEKRILVATDIFGRGIDVERVNVSISY 120
Query: 364 DMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV-SKF 407
D P AD+YLHRVGRAGRFGTKGLAI FVSS D+++L Q+ S+F
Sbjct: 121 DTPTDADSYLHRVGRAGRFGTKGLAIMFVSSDEDAEVLKQIQSRF 165
>gi|71000753|ref|XP_755058.1| DEAD-box RNA helicase Dhh1/Vad1 [Aspergillus fumigatus Af293]
gi|74673820|sp|Q4WWD3.1|DHH1_ASPFU RecName: Full=ATP-dependent RNA helicase dhh1
gi|66852695|gb|EAL93020.1| DEAD-box RNA helicase Dhh1/Vad1, putative [Aspergillus fumigatus
Af293]
gi|159128072|gb|EDP53187.1| ATP dependent RNA helicase (Dhh1), putative [Aspergillus fumigatus
A1163]
Length = 507
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 154/396 (38%), Positives = 220/396 (55%), Gaps = 23/396 (5%)
Query: 1 MGETRDNEYEDELLDYEEEDA--QAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELL 58
+GE E L+ +DA Q D ATK G+ F DF +K EL+
Sbjct: 14 LGEANSELRWKEQLNMPAKDARPQTEDVTATK-----------GLE---FEDFYIKRELM 59
Query: 59 RAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTAL 118
I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++ P + AL
Sbjct: 60 MGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERINPKSTKTQAL 119
Query: 119 VLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRI 177
+L TRELA Q + +L I V V GG + D+++ N+ I+VGTPGR+
Sbjct: 120 ILVPTRELALQTSQVCKTLGKHL-GINVMVTTGGTGLM--DDIIRLNDAVHILVGTPGRV 176
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
L LA L F++DE DK+L S + ++++ P D+QVM+FSAT ++
Sbjct: 177 LDLASKGVADLSECPTFVMDEADKLL-SPEFTPVIEQLLSFHPKDRQVMLFSATFPLIVK 235
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 297
K M++P EI + DE LTL G+ Q+Y + E +K LN L L NQ +IF S
Sbjct: 236 SFKDKHMRNPYEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFSKLQINQSIIFCNS 293
Query: 298 VSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERV 357
+R L K + E + H+ M Q+ R + F+ G R LV +DL+ RGIDI+ V
Sbjct: 294 TNRVELLAKKITELGYSCFYSHARMLQQHRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAV 353
Query: 358 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
N+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 354 NVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLIN 389
>gi|358394480|gb|EHK43873.1| hypothetical protein TRIATDRAFT_37339 [Trichoderma atroviride IMI
206040]
Length = 514
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 143/347 (41%), Positives = 203/347 (58%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F +F LK +LL I ++GFE PS +Q E IP A+ G DV+ +AK+G GKTA FV+ L++
Sbjct: 51 FENFALKRDLLMGIFEAGFEKPSPIQEEAIPVALTGRDVLARAKNGTGKTAAFVIPALER 110
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
P ++ L+L TRELA Q + +L + V V GG ++ D+++ + P
Sbjct: 111 INPKISKIQCLILVPTRELAMQTSQVCKNLGKHL-GVNVMVTTGGTGLR--DDIIRLQEP 167
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
IVVGTPGRIL LA L FI+DE DK+L S++ ++++ + P D+QVM
Sbjct: 168 VHIVVGTPGRILDLAGKNVADLSECPMFIMDEADKLL-SIEFTPVIEQLLQFHPKDRQVM 226
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K M P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 227 LFSATFPLSVKDFSDKNMTSPYEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFSKL 284
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q R + F+ G R LV +D
Sbjct: 285 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHARMQQHARNRVFHDFRNGVCRNLVCSD 344
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 345 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLIN 391
>gi|340518916|gb|EGR49156.1| hypothetical protein TRIREDRAFT_106962 [Trichoderma reesei QM6a]
Length = 526
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 143/347 (41%), Positives = 203/347 (58%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F +F LK +LL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ L++
Sbjct: 51 FENFALKRDLLMGIFEAGFEKPSPIQEEAIPVALTGRDILARAKNGTGKTAAFVIPALER 110
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
P ++ L+L TRELA Q + +L + V V GG ++ D+L+ + P
Sbjct: 111 INPKISKIQCLILVPTRELAMQTSQVCKTLGKHL-GVNVMVTTGGTGLR--DDILRLQEP 167
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
IVVGTPGRIL LA L FI+DE DK+L S++ ++++ + P D+QVM
Sbjct: 168 VHIVVGTPGRILDLAGKNVADLSECPMFIMDEADKLL-SVEFTPVIEQLLQFHPKDRQVM 226
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K M P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 227 LFSATFPLSVKDFSDKNMTSPYEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFSKL 284
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q R + F+ G R LV +D
Sbjct: 285 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHARMQQHARNRVFHDFRNGVCRNLVCSD 344
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 345 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLIN 391
>gi|408391607|gb|EKJ70979.1| hypothetical protein FPSE_08838 [Fusarium pseudograminearum CS3096]
Length = 524
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 143/347 (41%), Positives = 204/347 (58%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F +F LK +LL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++
Sbjct: 51 FENFALKRDLLMGIFEAGFEKPSPIQEESIPVALTGRDILARAKNGTGKTAAFVIPTLER 110
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
P ++ L+L TRELA Q + +L I V V GG ++ D+++ + P
Sbjct: 111 INPKISKIQCLILVPTRELAMQTSQVCKTLGKHL-GINVMVTTGGTGLR--DDIIRLQDP 167
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
IVVGTPGRIL LA L FI+DE DK+L S++ ++++ + P D+QVM
Sbjct: 168 VHIVVGTPGRILDLAGKNVADLSECPMFIMDEADKLL-SIEFTPVIEQLLQFHPKDRQVM 226
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K M P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 227 LFSATFPLSVKDFSDKNMVSPYEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFSKL 284
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q R + F+ G R LV +D
Sbjct: 285 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMQQHARNRVFHDFRNGVCRNLVCSD 344
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GR+G GLAI ++
Sbjct: 345 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLIN 391
>gi|156380897|ref|XP_001632003.1| predicted protein [Nematostella vectensis]
gi|156219053|gb|EDO39940.1| predicted protein [Nematostella vectensis]
Length = 432
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 140/349 (40%), Positives = 211/349 (60%), Gaps = 11/349 (3%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D+ LK ELL I + GF+ PS +Q E IP A+ G D++ +AK+G GKTA +++ L++
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLER 108
Query: 108 TEPNPGQVTALVLCHTRELAYQ---ICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKN 164
T+ + ALVL TRELA Q IC E + +V V GG ++K L N
Sbjct: 109 TDTTKNCIQALVLVPTRELALQTSQICIELGKHM----GAQVMVTTGGTSLKDDILRLYN 164
Query: 165 ECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQ 224
+ ++V TPGR+L L + K + + ++DE DK+L S+D ++ +++I K P ++Q
Sbjct: 165 KV-HVIVATPGRVLDLMKKKLADMSKCQMLVMDEADKLL-SMDFKKMLEQIIKHLPENRQ 222
Query: 225 VMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLD 284
+++FSAT +R +K ++ P EI + DE LTLHG+ Q+Y + E +K LN L
Sbjct: 223 ILLFSATFPISVRDFKEKHLRKPYEINLMDE--LTLHGVTQYYAFVEEKQKVHCLNTLFQ 280
Query: 285 ALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVA 344
L NQ +IF SV R L + ++E F IH+ MSQ R + F++G+ R LV
Sbjct: 281 KLQINQSIIFCNSVQRVELLARKILELGFSCFYIHARMSQSHRNRVFHDFRQGHCRNLVC 340
Query: 345 TDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
+DL RGIDI+ VN+VIN+D P +++TYLHR+GR+GRFG G+AI ++
Sbjct: 341 SDLFTRGIDIQSVNVVINFDFPKNSETYLHRIGRSGRFGHLGVAINLIT 389
>gi|407923844|gb|EKG16907.1| RNA helicase ATP-dependent DEAD-box conserved site [Macrophomina
phaseolina MS6]
Length = 504
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 143/347 (41%), Positives = 203/347 (58%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F DF +K EL+ I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++
Sbjct: 47 FEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLER 106
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
P + AL+L TRELA Q + +L + V V GG +K D+++ +E
Sbjct: 107 INPKSTKTQALILVPTRELALQTSQVCKTLGKHL-GLNVMVTTGGTGLK--DDIIRLSEP 163
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
I+VGTPGRIL LA L F++DE DK+L S + ++++ P D+QVM
Sbjct: 164 VHIIVGTPGRILDLASKGVADLSACPTFVMDEADKLL-SPEFTPVIEQLLAFHPKDRQVM 222
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K M P EI + DE LTL G+ Q+Y + E +K LN L + L
Sbjct: 223 LFSATFPIVVKSFKDKHMNQPYEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFNKL 280
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q R + F+ G R LV +D
Sbjct: 281 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMLQHARNRVFHDFRNGVCRNLVCSD 340
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 341 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLIN 387
>gi|322700752|gb|EFY92505.1| ATP-dependent RNA helicase DHH1 [Metarhizium acridum CQMa 102]
Length = 502
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 143/347 (41%), Positives = 204/347 (58%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F +F LK +LL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ L++
Sbjct: 51 FENFALKRDLLMGIFEAGFEKPSPIQEEAIPVALTGRDILARAKNGTGKTAAFVIPALER 110
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
P ++ L+L TRELA Q + +L I V V GG ++ D+L+ + P
Sbjct: 111 INPKVSKIQCLILVPTRELAMQTSQVCKTLGKHL-GINVMVTTGGTGLR--DDILRLQDP 167
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
IVVGTPGRIL LA L FI+DE DK+L S++ ++++ + P D+QVM
Sbjct: 168 VHIVVGTPGRILDLAGKSVADLSECPMFIMDEADKLL-SIEFTPVIEQLLQFHPKDRQVM 226
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K M P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 227 LFSATFPLSVKDFSDKNMVSPYEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFSKL 284
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q+ R + F+ G R LV +D
Sbjct: 285 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHARMQQQARNRVFHDFRNGVCRNLVCSD 344
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GR+G GLAI ++
Sbjct: 345 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLIN 391
>gi|297742547|emb|CBI34696.3| unnamed protein product [Vitis vinifera]
Length = 438
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 146/390 (37%), Positives = 223/390 (57%), Gaps = 18/390 (4%)
Query: 10 EDELLDYEEEDAQA-----PDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDS 64
+ E++D +D +A P K A KG + F D+ LK ELL I +
Sbjct: 29 QSEVVDSSSQDWKAQLRVPPPDTRYKTEDVTATKG------NEFEDYFLKRELLMGIYEK 82
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFE PS +Q E IP A+ G D++ +AK+G GKTA F + L++ +P+ + ++L TR
Sbjct: 83 GFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDPDNNVIQVVILVPTR 142
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARD 183
ELA Q + +L I+V V GG ++K D+++ P ++VGTPGRIL L++
Sbjct: 143 ELALQTSQVCKELGKHL-KIEVMVTTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLSKK 199
Query: 184 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF 243
LK+ ++DE DK+L S + + V+++ + P ++Q++MFSAT ++ ++
Sbjct: 200 GICILKDCSVLVMDEADKLL-SPEFQPSVEQLIRFLPQNRQILMFSATFPVTVKDFKDRY 258
Query: 244 MQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAE 303
++ P I + DE LTL G+ Q+Y + E +K LN L L NQ +IF SV+R
Sbjct: 259 LKKPYVINLMDE--LTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVEL 316
Query: 304 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 363
L K + E + IH+ M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+
Sbjct: 317 LAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINF 376
Query: 364 DMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
D P +++TYLHRVGR+GRFG GLA+ ++
Sbjct: 377 DFPKNSETYLHRVGRSGRFGHLGLAVNLIT 406
>gi|125549135|gb|EAY94957.1| hypothetical protein OsI_16765 [Oryza sativa Indica Group]
Length = 484
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 146/380 (38%), Positives = 214/380 (56%), Gaps = 13/380 (3%)
Query: 15 DYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQH 74
D++ + P + A KG + F D+ LK ELL I + GFE PS +Q
Sbjct: 85 DWKAQLKLPPQDTRYRTEDVTATKG------NEFEDYFLKRELLMGIYEKGFERPSPIQE 138
Query: 75 ECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEF 134
E IP A+ G D++ +AK+G GKTA F + L++ + + + ++L TRELA Q
Sbjct: 139 ESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDKNAIQVVILVPTRELALQTSQVC 198
Query: 135 ERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKNVRH 193
+ +L I+V V GG ++K D+++ P ++VGTPGRIL L + LKN
Sbjct: 199 KELGKHL-KIQVMVTTGGTSLK--DDIVRLYQPVHLLVGTPGRILDLTKKGVCVLKNCSM 255
Query: 194 FILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVD 253
++DE DK+L S + + +QE+ + P ++Q++MFSAT ++ K++ P I +
Sbjct: 256 LVMDEADKLL-SPEFQPSIQELIRYLPSNRQILMFSATFPVTVKEFKDKYLPKPYVINLM 314
Query: 254 DEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNF 313
DE LTL G+ Q Y + E +K LN L L NQ +IF SV+R L K + E +
Sbjct: 315 DE--LTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGY 372
Query: 314 PSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYL 373
IH+ M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+D P SA+TYL
Sbjct: 373 SCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKSAETYL 432
Query: 374 HRVGRAGRFGTKGLAITFVS 393
HRVGR+GRFG GLA+ ++
Sbjct: 433 HRVGRSGRFGHLGLAVNLIT 452
>gi|322708424|gb|EFZ00002.1| ATP dependent RNA helicase (Dhh1), putative [Metarhizium anisopliae
ARSEF 23]
Length = 489
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 144/356 (40%), Positives = 207/356 (58%), Gaps = 7/356 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F +F LK +LL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ L++
Sbjct: 38 FENFALKRDLLMGIFEAGFEKPSPIQEEAIPVALTGRDILARAKNGTGKTAAFVIPALER 97
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
P ++ L+L TRELA Q + +L I V V GG ++ D+L+ + P
Sbjct: 98 INPKVSKIQCLILVPTRELAMQTSQVCKTLGKHL-GINVMVTTGGTGLR--DDILRLQEP 154
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
IVVGTPGRIL LA L FI+DE DK+L S++ ++++ + P D+QVM
Sbjct: 155 VHIVVGTPGRILDLAGKSVADLSECPMFIMDEADKLL-SIEFTPVIEQLLQFHPKDRQVM 213
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K M P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 214 LFSATFPLSVKDFSDKNMVSPYEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFSKL 271
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q+ R + F+ G R LV +D
Sbjct: 272 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHARMQQQARNRVFHDFRNGVCRNLVCSD 331
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILN 402
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GR+G GLAI ++ ++ N
Sbjct: 332 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLINWDDRFNLYN 387
>gi|46138553|ref|XP_390967.1| hypothetical protein FG10791.1 [Gibberella zeae PH-1]
gi|91206578|sp|Q4HW67.1|DHH1_GIBZE RecName: Full=ATP-dependent RNA helicase DHH1
Length = 486
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 144/356 (40%), Positives = 207/356 (58%), Gaps = 7/356 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F +F LK +LL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++
Sbjct: 44 FENFALKRDLLMGIFEAGFEKPSPIQEESIPVALTGRDILARAKNGTGKTAAFVIPTLER 103
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
P ++ L+L TRELA Q + +L I V V GG ++ D+++ + P
Sbjct: 104 INPKISKIQCLILVPTRELAMQTSQVCKTLGKHL-GINVMVTTGGTGLR--DDIIRLQDP 160
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
IVVGTPGRIL LA L FI+DE DK+L S++ ++++ + P D+QVM
Sbjct: 161 VHIVVGTPGRILDLAGKNVADLSECPMFIMDEADKLL-SIEFTPVIEQLLQFHPKDRQVM 219
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K M P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 220 LFSATFPLSVKDFSDKNMVSPYEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFSKL 277
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q R + F+ G R LV +D
Sbjct: 278 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMQQHARNRVFHDFRNGVCRNLVCSD 337
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILN 402
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GR+G GLAI ++ ++ N
Sbjct: 338 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLINWDDRFNLYN 393
>gi|260945084|ref|XP_002616840.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238850489|gb|EEQ39953.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 517
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 143/354 (40%), Positives = 200/354 (56%), Gaps = 7/354 (1%)
Query: 41 VGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVF 100
+ F DF LK ELL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA F
Sbjct: 25 LNTQGKSFEDFNLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDILARAKNGTGKTASF 84
Query: 101 VLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKD 160
V+ TLQ +P + AL+L TRELA Q +L I V GG N+K D
Sbjct: 85 VIPTLQMVKPKLNKTQALILVPTRELALQTSQVVRTLGKHL-GINCMVTTGGTNLK--DD 141
Query: 161 LLKNECP-QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
+++ P ++VGTPGR+L LA FI+DE DKML S + + +++I
Sbjct: 142 IMRLHDPVHVLVGTPGRVLDLASRNLADFSECPLFIMDEADKML-SREFKNVIEQILTFF 200
Query: 220 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKL 279
P +Q ++FSAT ++ K + P EI + DE LTL G+ Q Y + E +K L
Sbjct: 201 PEGRQSLLFSATFPYAVKSFMDKHLTKPYEINLMDE--LTLRGISQFYAFVEEKQKLHCL 258
Query: 280 NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNK 339
N L L NQ +IF S +R L K + E + H+ M Q+ R + F++G
Sbjct: 259 NTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCYYSHAKMPQQARNKVFHEFRQGKV 318
Query: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
R LV +DL+ RGID++ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI +S
Sbjct: 319 RNLVCSDLLTRGIDVQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLMS 372
>gi|212007716|gb|ACJ22452.1| putative eukaryotic translation initiation factor 4A [Pyropia
yezoensis]
Length = 408
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 137/365 (37%), Positives = 212/365 (58%), Gaps = 5/365 (1%)
Query: 31 ANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQA 90
A+G Y +H + F D L+ ELLR I GFE PS +Q I I D I QA
Sbjct: 37 ADGSEITTNYTEVHET-FDDMNLREELLRGIYAYGFEKPSAIQQRAIMPLIQNRDTIAQA 95
Query: 91 KSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFY 150
+SGMGKTA F + LQ + + +V AL+L TRELA QI + S ++ I
Sbjct: 96 QSGMGKTATFSIGVLQNIDTSVRKVQALILAPTRELAQQIHKVVQTLSDFMS-ISCHACI 154
Query: 151 GGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRR 210
GG + + ++E P +VVGTPGR+ + + + L +++ F LDE D+ML S +
Sbjct: 155 GGTRVMEDVRVFQSETPHVVVGTPGRVFDMIQRRALDTGSIKAFCLDEADEML-SRGFKE 213
Query: 211 DVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL 270
+ EIF+ P QV +FSAT+ ++ + +KFM+DP+ I V + +LTL G+ Q Y+ +
Sbjct: 214 QIYEIFQFMPATCQVGLFSATMPDDVLEMTQKFMRDPIRILVKKD-ELTLEGIKQFYVAV 272
Query: 271 S-ELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLT 329
E K L DL + L+ Q +I+ + + L + E +F +H M Q++R
Sbjct: 273 EREDWKLETLCDLYETLNITQSIIYTNTRRKVEWLVAKMNERDFTVSSLHGDMDQKDRDI 332
Query: 330 RYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAI 389
+ F+ G+ R+L+ TDL+ RGID+++V++V+NYD+P + + Y+HR+GR+GRFG KG+AI
Sbjct: 333 IMREFRTGSTRVLITTDLLARGIDVQQVSLVVNYDLPTNKENYIHRIGRSGRFGRKGVAI 392
Query: 390 TFVSS 394
F++S
Sbjct: 393 NFITS 397
>gi|50294444|ref|XP_449633.1| hypothetical protein [Candida glabrata CBS 138]
gi|74661035|sp|Q6FJG1.1|FAL1_CANGA RecName: Full=ATP-dependent RNA helicase FAL1
gi|49528947|emb|CAG62609.1| unnamed protein product [Candida glabrata]
Length = 399
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 142/363 (39%), Positives = 215/363 (59%), Gaps = 7/363 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F LK LLR I GFE PS +Q I Q I G DVI QA+SG GKTA F + LQ
Sbjct: 25 FESMDLKEGLLRGIYSYGFEAPSAIQSRAITQIISGKDVIAQAQSGTGKTATFTIGMLQA 84
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIH-KDLLKNEC 166
+ + ALVL TRELA QI Y+ ++K GG +K K + K+ C
Sbjct: 85 IDLKKHDLQALVLSPTRELAAQIGKVVTNLGDYM-NVKAYAMTGGKTMKDDLKKIQKHGC 143
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML-ESLDMRRDVQEIFKMTPHDKQV 225
Q++ GTPGR+L + + + + ++V+ +LDE D++L ++L + + +IF P QV
Sbjct: 144 -QVISGTPGRVLDMIKRRLIETRHVQILVLDEADELLSDTLGFKHQIYDIFTKLPRTSQV 202
Query: 226 MMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLD 284
++ SAT+S EI + KKFM DP++I V + ++TL G+ Q+Y+ + + E K L D+ D
Sbjct: 203 VVVSATMSPEILEITKKFMNDPVKILVKRD-EITLEGIKQYYVNVEKEEWKFDTLCDIYD 261
Query: 285 ALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVA 344
+L Q VIF S + L L + NF I +H M Q+ER F+ G R+L++
Sbjct: 262 SLTITQCVIFCNSKKKVDWLAHKLKQSNFAVISMHGDMKQDERDRVMNEFRTGQSRVLIS 321
Query: 345 TDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
TD+ RGID+++V++VINYD+P+ + Y+HR+GR+GRFG KG+AI F++ D+ + ++
Sbjct: 322 TDVWARGIDVQQVSLVINYDLPEITENYVHRIGRSGRFGRKGVAINFLTKI-DASRMKEI 380
Query: 405 SKF 407
K+
Sbjct: 381 EKY 383
>gi|6689612|emb|CAB65518.1| ATP-dependent RNA helicase [Yarrowia lipolytica]
Length = 523
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 143/350 (40%), Positives = 206/350 (58%), Gaps = 8/350 (2%)
Query: 46 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTL 105
+GF DF LK ELL I ++GFE+PS +Q E IP A+ G D++ +AK+G GKTA FV+ L
Sbjct: 28 TGFEDFFLKRELLMGIFEAGFENPSPIQEEAIPIALAGRDILARAKNGTGKTAAFVIPAL 87
Query: 106 QQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE 165
QQ P ++ AL++ TRELA Q + +L IKV V GG N++ D+++ E
Sbjct: 88 QQVNPKVNKIQALIMVPTRELALQTSQVCKTLGKHL-GIKVMVTTGGTNLR--DDIMRLE 144
Query: 166 -CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHD-K 223
++VGTPGR+L LA K L FI+DE DK+L S D ++++ P +
Sbjct: 145 DTVHVLVGTPGRVLDLAGRKVADLSESPMFIMDEADKLL-SPDFTPIIEQVLHFFPWTTR 203
Query: 224 QVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLL 283
Q+++FSAT ++ + + P EI + DE LTL G+ Q+Y + E +K LN L
Sbjct: 204 QILVFSATSPLTVKAFMDRNLHKPYEINLMDE--LTLRGITQYYAFVDEKQKLHCLNTLF 261
Query: 284 DALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILV 343
LD NQ +IF S R L + + E + H+ M Q R + F+ G R LV
Sbjct: 262 SKLDINQSIIFCNSTVRVELLARKITELGYSCYYSHAKMIQSHRNRVFHEFRNGTCRNLV 321
Query: 344 ATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
+DL+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG G+AI ++
Sbjct: 322 CSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGIAINLIN 371
>gi|449017021|dbj|BAM80423.1| eukaryotic translation initiation factor eIF-4A [Cyanidioschyzon
merolae strain 10D]
Length = 417
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 137/348 (39%), Positives = 210/348 (60%), Gaps = 4/348 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D L+ ELLR I GFE PS +Q I + G D++ Q++SG GKT FV+ LQ
Sbjct: 45 FDDMGLRDELLRGIYAYGFEKPSAIQQRGIVPMVKGRDMLAQSQSGTGKTGCFVIGMLQN 104
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ + +V L+L TRELA QI Y+ +KV GG + L+ + P
Sbjct: 105 VDTSVRKVQGLILAPTRELAQQIQKVALALGDYM-GVKVHACIGGTRVVDDLRTLEQDTP 163
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
++VGTPGR+ + + + L ++ F++DE D+ML S + + +F+ P + QV +
Sbjct: 164 HVIVGTPGRVYDMIQRRALDTTTIKCFVMDEADEML-SRGFKEQIYMVFQYMPANCQVAL 222
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDAL 286
FSAT+ EI + +KF++DP I V + +LTL G+ Q YI + + E K L DL + +
Sbjct: 223 FSATIPAEIVEMAEKFLRDPARILVRKD-ELTLQGIRQFYIMVEKEEWKLETLIDLYETI 281
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
+Q VIFV S +A L++ + E +F IH+ MSQEER + F+ G+ R+L+ TD
Sbjct: 282 SASQTVIFVNSRRKAEWLSERMRERDFTVSVIHADMSQEERNLIMREFRSGSSRVLITTD 341
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSS 394
L+ RGID+++V++VINYD+P + + Y+HRVGR+GRFG KG+AI F+++
Sbjct: 342 LLARGIDVQQVSLVINYDLPSNRENYIHRVGRSGRFGRKGVAINFLAN 389
>gi|225426363|ref|XP_002271357.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 8 [Vitis vinifera]
Length = 480
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 146/390 (37%), Positives = 223/390 (57%), Gaps = 18/390 (4%)
Query: 10 EDELLDYEEEDAQA-----PDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDS 64
+ E++D +D +A P K A KG + F D+ LK ELL I +
Sbjct: 71 QSEVVDSSSQDWKAQLRVPPPDTRYKTEDVTATKG------NEFEDYFLKRELLMGIYEK 124
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFE PS +Q E IP A+ G D++ +AK+G GKTA F + L++ +P+ + ++L TR
Sbjct: 125 GFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDPDNNVIQVVILVPTR 184
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARD 183
ELA Q + +L I+V V GG ++K D+++ P ++VGTPGRIL L++
Sbjct: 185 ELALQTSQVCKELGKHL-KIEVMVTTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLSKK 241
Query: 184 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF 243
LK+ ++DE DK+L S + + V+++ + P ++Q++MFSAT ++ ++
Sbjct: 242 GICILKDCSVLVMDEADKLL-SPEFQPSVEQLIRFLPQNRQILMFSATFPVTVKDFKDRY 300
Query: 244 MQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAE 303
++ P I + DE LTL G+ Q+Y + E +K LN L L NQ +IF SV+R
Sbjct: 301 LKKPYVINLMDE--LTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVEL 358
Query: 304 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 363
L K + E + IH+ M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+
Sbjct: 359 LAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINF 418
Query: 364 DMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
D P +++TYLHRVGR+GRFG GLA+ ++
Sbjct: 419 DFPKNSETYLHRVGRSGRFGHLGLAVNLIT 448
>gi|440798314|gb|ELR19382.1| DEAD/DEAH box helicase/helicase conserved Cterminal domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 369
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 144/357 (40%), Positives = 208/357 (58%), Gaps = 8/357 (2%)
Query: 53 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNP 112
LK LLR I GFE PS +Q I Q I G DVI QA+SG GKTA F +S LQ+ +
Sbjct: 3 LKEPLLRGIYGFGFEKPSAIQQRAIGQVIKGRDVIAQAQSGTGKTATFSISALQRIDTTS 62
Query: 113 GQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNEC-PQIVV 171
+ AL+L TRELA QI +++ ++K V GG NI +D K E QIV
Sbjct: 63 KEPQALILSPTRELASQIQKVVYSLGSFM-NVKCHVCIGGTNI--GEDTRKLEAGAQIVS 119
Query: 172 GTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSAT 231
GTPGR+ + R + L ++++ ILDE D+ML S + + ++++ P QV++ SAT
Sbjct: 120 GTPGRVFDMIRRRSLRTRSIKMLILDEADEML-SRGFKEQIYDVYRHLPPATQVVLVSAT 178
Query: 232 LSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQ 290
L E+ + KFM DP+ I V + +LTL G+ Q ++ + + E K L DL D L Q
Sbjct: 179 LPHEVLEMTTKFMNDPIRILVKRD-ELTLEGIKQFFVAVEKEEWKFETLCDLYDTLTITQ 237
Query: 291 VVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGR 350
VIF + + L + + + NF + +H M Q ER F+ G+ R+L+ TD+ R
Sbjct: 238 AVIFCNTRRKVDWLTEKMRKVNFTVVAMHGAMEQSERDEIMTQFRAGDARVLITTDIWAR 297
Query: 351 GIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
GID+ +V++VINYD+P+ + YLHR+GR+GRFG KG+AI FV + D IL + +F
Sbjct: 298 GIDVSQVSLVINYDLPNDRELYLHRIGRSGRFGRKGVAINFVKN-DDIRILRDIEQF 353
>gi|2370593|emb|CAA73168.1| translation initiation factor eIF4A II [Xenopus laevis]
Length = 413
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 145/362 (40%), Positives = 206/362 (56%), Gaps = 6/362 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D L LLR I GFE PS +Q I I G DVI QA+SG GKTA F +S LQQ
Sbjct: 40 FDDMSLSESLLRGIYAYGFEKPSAIQQRAIMPCIKGYDVIAQAQSGTGKTATFAISILQQ 99
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
E + AL+L TRELA QI Y+ GG N++ L++E P
Sbjct: 100 IELDMKATQALMLAPTRELAQQIQKVVMALGDYM-GASCHACIGGTNVRAEVQKLQSEAP 158
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIF-KMTPHDKQVM 226
I+VGTPGR+ + + LS K ++ F+LDE D+ML S + + +IF K+ + QV+
Sbjct: 159 HIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEML-SRGFKDQIYDIFQKVLSMNAQVV 217
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDA 285
+ SAT+ ++ V KKFM+DP+ I V E +LTL G+ Q YI + E K L DL +
Sbjct: 218 LLSATMPADVLEVTKKFMRDPIRILVKKE-ELTLEGIRQFYINVEREEWKLDTLCDLYET 276
Query: 286 LDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVAT 345
L Q VIF+ + + L + + +F +H M Q+ER + F+ G+ R+L+ T
Sbjct: 277 LTITQAVIFINTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITT 336
Query: 346 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVS 405
DL+ RGID+++V++VINYD+P + + Y+HR+GR GRFG KG+AI V+ D L +
Sbjct: 337 DLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGWKGVAINMVTE-DDKRTLKDIE 395
Query: 406 KF 407
F
Sbjct: 396 TF 397
>gi|218184840|gb|EEC67267.1| hypothetical protein OsI_34232 [Oryza sativa Indica Group]
Length = 524
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 147/389 (37%), Positives = 219/389 (56%), Gaps = 20/389 (5%)
Query: 12 ELLDYEEEDAQA------PDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSG 65
E +D ED +A PD+ + A K + F D+ LK ELL I + G
Sbjct: 117 EAVDSSSEDWKAQLNLPAPDTRYRTEDVTATK-------GNEFEDYFLKRELLMGIYEKG 169
Query: 66 FEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRE 125
FE PS +Q E IP A+ G D++ +AK+G GKTA F + L++ +P + ++L TRE
Sbjct: 170 FERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDPEKNAIQVVILVPTRE 229
Query: 126 LAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDK 184
LA Q + YL +I+V V GG ++K D+++ P ++VGTPGRIL L R
Sbjct: 230 LALQTSQVCKELGKYL-NIQVMVSTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLTRKG 286
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 244
LK+ ++DE DK+L + + ++++ P ++Q++MFSAT ++ +K++
Sbjct: 287 ICVLKDCSMLVMDEADKLLAP-EFQPSIEQLIHFLPANRQLLMFSATFPVTVKDFKEKYL 345
Query: 245 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 304
P I + DE LTL G+ Q+Y + E +K LN L L NQ +IF SV+R L
Sbjct: 346 PRPYVINLMDE--LTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELL 403
Query: 305 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 364
K + E + IH+ M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+D
Sbjct: 404 AKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFD 463
Query: 365 MPDSADTYLHRVGRAGRFGTKGLAITFVS 393
P +++TYLHRVGR+GRFG GLA+ ++
Sbjct: 464 FPKTSETYLHRVGRSGRFGHLGLAVNLIT 492
>gi|143360935|sp|Q109G2.2|RH12_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 12
gi|10140782|gb|AAG13612.1|AC078840_3 putative RNA helicase [Oryza sativa Japonica Group]
gi|110289357|gb|ABB47852.2| ATP-dependent RNA helicase ste13, putative, expressed [Oryza sativa
Japonica Group]
gi|215706425|dbj|BAG93281.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222613101|gb|EEE51233.1| hypothetical protein OsJ_32082 [Oryza sativa Japonica Group]
Length = 521
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 147/389 (37%), Positives = 219/389 (56%), Gaps = 20/389 (5%)
Query: 12 ELLDYEEEDAQA------PDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSG 65
E +D ED +A PD+ + A K + F D+ LK ELL I + G
Sbjct: 114 EAVDSSSEDWKAQLNLPAPDTRYRTEDVTATK-------GNEFEDYFLKRELLMGIYEKG 166
Query: 66 FEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRE 125
FE PS +Q E IP A+ G D++ +AK+G GKTA F + L++ +P + ++L TRE
Sbjct: 167 FERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDPEKNAIQVVILVPTRE 226
Query: 126 LAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDK 184
LA Q + YL +I+V V GG ++K D+++ P ++VGTPGRIL L R
Sbjct: 227 LALQTSQVCKELGKYL-NIQVMVSTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLTRKG 283
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 244
LK+ ++DE DK+L + + ++++ P ++Q++MFSAT ++ +K++
Sbjct: 284 ICVLKDCSMLVMDEADKLLAP-EFQPSIEQLIHFLPANRQLLMFSATFPVTVKDFKEKYL 342
Query: 245 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 304
P I + DE LTL G+ Q+Y + E +K LN L L NQ +IF SV+R L
Sbjct: 343 PRPYVINLMDE--LTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELL 400
Query: 305 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 364
K + E + IH+ M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+D
Sbjct: 401 AKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFD 460
Query: 365 MPDSADTYLHRVGRAGRFGTKGLAITFVS 393
P +++TYLHRVGR+GRFG GLA+ ++
Sbjct: 461 FPKTSETYLHRVGRSGRFGHLGLAVNLIT 489
>gi|115459616|ref|NP_001053408.1| Os04g0533000 [Oryza sativa Japonica Group]
gi|75327302|sp|Q7XMK8.1|RH6_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 6
gi|32489827|emb|CAE04571.1| OSJNBb0039L24.10 [Oryza sativa Japonica Group]
gi|113564979|dbj|BAF15322.1| Os04g0533000 [Oryza sativa Japonica Group]
gi|125591093|gb|EAZ31443.1| hypothetical protein OsJ_15580 [Oryza sativa Japonica Group]
gi|215701173|dbj|BAG92597.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 498
Score = 251 bits (642), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 146/380 (38%), Positives = 214/380 (56%), Gaps = 13/380 (3%)
Query: 15 DYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQH 74
D++ + P + A KG + F D+ LK ELL I + GFE PS +Q
Sbjct: 99 DWKAQLKLPPQDTRYRTEDVTATKG------NEFEDYFLKRELLMGIYEKGFERPSPIQE 152
Query: 75 ECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEF 134
E IP A+ G D++ +AK+G GKTA F + L++ + + + ++L TRELA Q
Sbjct: 153 ESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDKNAIQVVILVPTRELALQTSQVC 212
Query: 135 ERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKNVRH 193
+ +L I+V V GG ++K D+++ P ++VGTPGRIL L + LKN
Sbjct: 213 KELGKHL-KIQVMVTTGGTSLK--DDIVRLYQPVHLLVGTPGRILDLTKKGVCVLKNCSM 269
Query: 194 FILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVD 253
++DE DK+L S + + +QE+ + P ++Q++MFSAT ++ K++ P I +
Sbjct: 270 LVMDEADKLL-SPEFQPSIQELIRYLPSNRQILMFSATFPVTVKEFKDKYLPKPYVINLM 328
Query: 254 DEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNF 313
DE LTL G+ Q Y + E +K LN L L NQ +IF SV+R L K + E +
Sbjct: 329 DE--LTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGY 386
Query: 314 PSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYL 373
IH+ M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+D P SA+TYL
Sbjct: 387 SCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKSAETYL 446
Query: 374 HRVGRAGRFGTKGLAITFVS 393
HRVGR+GRFG GLA+ ++
Sbjct: 447 HRVGRSGRFGHLGLAVNLIT 466
>gi|425784133|gb|EKV21927.1| hypothetical protein PDIP_01520 [Penicillium digitatum Pd1]
Length = 541
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 142/347 (40%), Positives = 204/347 (58%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F DF +K EL+ I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++
Sbjct: 48 FEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLER 107
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
P + AL+L TRELA Q + +L I V V GG + D+++ N+
Sbjct: 108 INPKSTKTQALILVPTRELALQTSQVCKTLGKHL-GINVMVTTGGTGLM--DDIIRLNDP 164
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
I+VGTPGR+L LA L F++DE DK+L S + ++++ P D+QVM
Sbjct: 165 VHILVGTPGRVLDLASKGVADLAECPTFVMDEADKLL-SPEFTPVIEQLMSFHPKDRQVM 223
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K M++P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 224 LFSATFPLIVKSFKDKHMRNPYEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFSKL 281
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q+ R + F+ G R LV +D
Sbjct: 282 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHARMLQQHRNRVFHDFRNGVCRNLVCSD 341
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 342 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLIN 388
>gi|425778602|gb|EKV16720.1| hypothetical protein PDIG_19090 [Penicillium digitatum PHI26]
Length = 525
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 142/347 (40%), Positives = 204/347 (58%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F DF +K EL+ I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++
Sbjct: 48 FEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLER 107
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
P + AL+L TRELA Q + +L I V V GG + D+++ N+
Sbjct: 108 INPKSTKTQALILVPTRELALQTSQVCKTLGKHL-GINVMVTTGGTGLM--DDIIRLNDP 164
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
I+VGTPGR+L LA L F++DE DK+L S + ++++ P D+QVM
Sbjct: 165 VHILVGTPGRVLDLASKGVADLAECPTFVMDEADKLL-SPEFTPVIEQLMSFHPKDRQVM 223
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K M++P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 224 LFSATFPLIVKSFKDKHMRNPYEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFSKL 281
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q+ R + F+ G R LV +D
Sbjct: 282 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHARMLQQHRNRVFHDFRNGVCRNLVCSD 341
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 342 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLIN 388
>gi|358054409|dbj|GAA99335.1| hypothetical protein E5Q_06030 [Mixia osmundae IAM 14324]
Length = 1043
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 141/347 (40%), Positives = 202/347 (58%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D+ LK ELL I ++GFE PS +Q E IP A+ G D++ +AK+G GKT FV+ L++
Sbjct: 465 FEDYFLKRELLMGIFEAGFEKPSPIQEEAIPIALAGRDILARAKNGTGKTGSFVIPALEK 524
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
P ++ AL+L TRELA Q + +L +++ V GG ++K D+L+ E
Sbjct: 525 VNPKVNKIQALILVPTRELALQTSQVCKTLGKHL-GVQIMVTTGGTSLK--DDILRLQET 581
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
IVVGTPGR+L LA + F++DE DK+L S + +++I + P D+QVM
Sbjct: 582 VHIVVGTPGRVLDLASKGIADVSACPTFVMDEADKLL-SPEFTLVIEQILSLLPKDRQVM 640
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K M P EI + DE LTL G+ Q+Y L E +K LN L L
Sbjct: 641 LFSATFPLLVKDFKDKHMTKPYEINLMDE--LTLRGVTQYYAFLEERQKVHCLNTLFSKL 698
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S SR L K + E + H+ M Q +R + F+ G R LV +D
Sbjct: 699 QINQSIIFTNSTSRVELLAKKITELGYSCFYSHAKMLQADRNRVFHDFRSGKCRNLVCSD 758
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGID+ VN+VIN+D P +++YLHR+GR+GRFG GLAI ++
Sbjct: 759 LLTRGIDVPSVNVVINFDFPKQSESYLHRIGRSGRFGHLGLAINLIT 805
>gi|255945213|ref|XP_002563374.1| Pc20g08510 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588109|emb|CAP86180.1| Pc20g08510 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 525
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 142/347 (40%), Positives = 204/347 (58%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F DF +K EL+ I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++
Sbjct: 48 FEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLER 107
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
P + AL+L TRELA Q + +L I V V GG + D+++ N+
Sbjct: 108 INPKSTKTQALILVPTRELALQTSQVCKTLGKHL-GINVMVTTGGTGLM--DDIIRLNDP 164
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
I+VGTPGR+L LA L F++DE DK+L S + ++++ P D+QVM
Sbjct: 165 VHILVGTPGRVLDLASKGVADLSECPTFVMDEADKLL-SPEFTPVIEQLMSFHPKDRQVM 223
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K M++P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 224 LFSATFPLIVKSFKDKHMRNPYEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFSKL 281
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q+ R + F+ G R LV +D
Sbjct: 282 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHARMLQQHRNRVFHDFRNGVCRNLVCSD 341
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 342 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLIN 388
>gi|400598680|gb|EJP66389.1| DEAD/DEAH box helicase [Beauveria bassiana ARSEF 2860]
Length = 528
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 141/356 (39%), Positives = 205/356 (57%), Gaps = 7/356 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F +F LK +LL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ L++
Sbjct: 77 FENFALKRDLLMGIFEAGFEKPSPIQEEAIPVALTGRDILARAKNGTGKTAAFVIPALER 136
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
P ++ L+L TRELA Q + +L + V V GG ++ D+L+ P
Sbjct: 137 INPKVNKIQCLILVPTRELAMQTSQVCKTLGKHL-GVNVMVTTGGTGLR--DDILRLAEP 193
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
+VVGTPGRIL LA L FI+DE DK+L S + ++++ + P D+QVM
Sbjct: 194 VHVVVGTPGRILDLAGKNVADLSECPMFIMDEADKLL-SAEFTPTIEQLLRFHPKDRQVM 252
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ + M P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 253 LFSATFPLSVKDFSDRNMSSPYEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFSKL 310
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q+ R + F+ G R LV +D
Sbjct: 311 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHARMQQQARNRVFHDFRNGVCRNLVCSD 370
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILN 402
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GR+G GLAI ++ ++ N
Sbjct: 371 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLINWEDRFNLYN 426
>gi|15233064|ref|NP_191683.1| DEAD-box ATP-dependent RNA helicase 12 [Arabidopsis thaliana]
gi|42572753|ref|NP_974472.1| DEAD-box ATP-dependent RNA helicase 12 [Arabidopsis thaliana]
gi|75335832|sp|Q9M2E0.1|RH12_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 12
gi|6850891|emb|CAB71054.1| DEAD box RNA helicase RH12 [Arabidopsis thaliana]
gi|21539435|gb|AAM53270.1| DEAD box RNA helicase RH12 [Arabidopsis thaliana]
gi|23197660|gb|AAN15357.1| DEAD box RNA helicase RH12 [Arabidopsis thaliana]
gi|332646656|gb|AEE80177.1| DEAD-box ATP-dependent RNA helicase 12 [Arabidopsis thaliana]
gi|332646657|gb|AEE80178.1| DEAD-box ATP-dependent RNA helicase 12 [Arabidopsis thaliana]
Length = 498
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 143/373 (38%), Positives = 214/373 (57%), Gaps = 21/373 (5%)
Query: 22 QAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAI 81
Q D ATK N F D+ LK +LL+ I + GFE PS +Q E IP A+
Sbjct: 114 QTADVTATKGNE--------------FEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIAL 159
Query: 82 LGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYL 141
G D++ +AK+G GKT F + L++ +PN + A++L TRELA Q + S YL
Sbjct: 160 TGSDILARAKNGTGKTGAFCIPVLEKIDPNNNVIQAMILVPTRELALQTSQVCKELSKYL 219
Query: 142 PDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKNVRHFILDECD 200
+I+V V GG +++ D+++ P ++VGTPGRIL L + LK+ ++DE D
Sbjct: 220 -NIQVMVTTGGTSLR--DDIMRLHQPVHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEAD 276
Query: 201 KMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTL 260
K+L S + + ++E+ + P ++Q +MFSAT ++ + ++ P I + D+ LTL
Sbjct: 277 KLL-SAEFQPSLEELIQFLPQNRQFLMFSATFPVTVKAFKDRHLRKPYVINLMDQ--LTL 333
Query: 261 HGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHS 320
G+ Q+Y + E +K LN L L NQ +IF SV+R L K + E + IH+
Sbjct: 334 MGVTQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHA 393
Query: 321 GMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAG 380
M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+D P ++++YLHRVGR+G
Sbjct: 394 KMVQDHRNRVFHEFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSG 453
Query: 381 RFGTKGLAITFVS 393
RFG GLA+ V+
Sbjct: 454 RFGHLGLAVNLVT 466
>gi|341896005|gb|EGT51940.1| hypothetical protein CAEBREN_19695 [Caenorhabditis brenneri]
Length = 402
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 140/361 (38%), Positives = 213/361 (59%), Gaps = 6/361 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK ELLR I GFE PS +Q I G DVI QA+SG GKTA F +S LQ+
Sbjct: 31 FDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQR 90
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ V ALV+ TRELA QI YL ++ + GG +++ + L+N
Sbjct: 91 IDHEDPHVQALVMAPTRELAQQIQKVMSALGEYL-NVNILPCIGGTSVRDDQRKLENGI- 148
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
+VVGTPGR+ + L ++ F+LDE D+ML S + + E+F+ P D QV++
Sbjct: 149 HVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEML-SRGFKDQIYEVFRSMPQDVQVVL 207
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDAL 286
SAT+ E+ V ++FM++P+ I V + +LTL G+ Q YI + + E K L DL + +
Sbjct: 208 LSATMPSEVLDVTERFMRNPIRILVKKD-ELTLEGIRQFYINVQKDEWKFDCLCDLYNVV 266
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
+ Q VIF + + +L + + F C+H M Q ER T + F+ G+ R+L+ TD
Sbjct: 267 NVTQAVIFCNTRRKVDQLTEQMTAKQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTD 326
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
++ RGID+++V++VINYD+P + + Y+HR+GR+GRFG KG+AI FV+ +D+ L ++
Sbjct: 327 ILARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTE-NDARQLKEIET 385
Query: 407 F 407
+
Sbjct: 386 Y 386
>gi|320583039|gb|EFW97255.1| Cytoplasmic DExD/H-box helicase [Ogataea parapolymorpha DL-1]
Length = 451
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 141/372 (37%), Positives = 214/372 (57%), Gaps = 14/372 (3%)
Query: 30 KANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQ 89
K +G + + F F LK ELL I ++GFE PS +Q E IP A++G D++ +
Sbjct: 13 KKDGRPQTDDVLATKGNTFESFHLKRELLMGIFEAGFEKPSPIQEEAIPVALMGRDILAR 72
Query: 90 AKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVF 149
AK+G GKTA FV+ TL++ +P ++ AL+L TRELA Q + +L I+V V
Sbjct: 73 AKNGTGKTAAFVIPTLEKLKPKVNKIQALILVPTRELALQTSQVVKTLGAHL-GIQVMVT 131
Query: 150 YGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDM 208
GG +++ D+++ +E ++VGTPGR+L LA K R F++DE DKML S +
Sbjct: 132 TGGTSLR--DDIMRLHEPVHVLVGTPGRVLDLASRKLAEFDECRMFVMDEADKML-SREF 188
Query: 209 RRDVQEIFKMTPHDK-------QVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH 261
+ +++I K P Q ++FSAT ++ + + P EI + DE LTL
Sbjct: 189 KNIIEQILKFFPQSSSGKGNGYQSLLFSATFPLAVKSFMDQHLYKPYEINLMDE--LTLK 246
Query: 262 GLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSG 321
G+ Q+Y + E +K LN L L NQ +IF S +R L+K + E ++ H+
Sbjct: 247 GITQYYAFVEEKQKLHCLNTLFSKLQINQSIIFCNSTNRVELLSKKITELDYSCYYSHAK 306
Query: 322 MSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 381
M Q R + F++G R LV +DL+ RGIDI+ VN+V+N+D P +A+TYLHR+GR+GR
Sbjct: 307 MPQAARNKVFHEFRQGKVRNLVCSDLLTRGIDIQAVNVVVNFDFPKTAETYLHRIGRSGR 366
Query: 382 FGTKGLAITFVS 393
FG G+AI ++
Sbjct: 367 FGHFGIAINLIN 378
>gi|344305098|gb|EGW35330.1| ATP-dependent RNA helicase [Spathaspora passalidarum NRRL Y-27907]
Length = 400
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 140/368 (38%), Positives = 215/368 (58%), Gaps = 6/368 (1%)
Query: 41 VGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVF 100
+ +H + F LKP+LL+ I GFE PS +Q I Q I G D I QA+SG GKTA F
Sbjct: 22 IKVHRT-FESMKLKPDLLKGIYGYGFEAPSAIQSRAIMQIISGKDTIAQAQSGTGKTATF 80
Query: 101 VLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKD 160
+ LQ + AL+L TRELA QI + + Y+ +I GG+N+
Sbjct: 81 SIGMLQVIDTKSHDCQALILSPTRELAVQIENVVKHLGDYM-NIHTHALIGGINVGQDVK 139
Query: 161 LLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTP 220
L+ PQIV GTPGR+L + + ++LS ++++ ILDE D++ + + + EI+K P
Sbjct: 140 KLQTSQPQIVSGTPGRVLDVLKRRNLSPRHIKILILDEADELF-TKGFKEQIYEIYKQLP 198
Query: 221 HDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKL 279
QV++ SATLS E+ + KF DP++I V + +++L G+ Q+Y++ + E K L
Sbjct: 199 PGAQVVVVSATLSPEVLEMTNKFTTDPVKILVKRD-EISLSGIKQYYVQCEKEEWKFDTL 257
Query: 280 NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNK 339
DL D L Q VIF + + L + + + NF + +H M Q+ER + F+ GN
Sbjct: 258 CDLYDNLTITQAVIFCNTKLKVNWLVEQMRKQNFTVVGMHGDMKQDERDSIMNDFRTGNS 317
Query: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSD 399
R+L++TD+ RGID+++V++VINYD+P + Y+HR+GR+GRFG KG AI ++ A D
Sbjct: 318 RVLISTDVWARGIDVQQVSLVINYDLPTDKENYIHRIGRSGRFGRKGTAINLITKA-DVQ 376
Query: 400 ILNQVSKF 407
++ KF
Sbjct: 377 TQKELEKF 384
>gi|452820962|gb|EME27998.1| ATP-dependent RNA helicase [Galdieria sulphuraria]
Length = 496
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 142/381 (37%), Positives = 218/381 (57%), Gaps = 13/381 (3%)
Query: 15 DYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQH 74
D++ P K A KG + F D+ LK ELL I + GFE PS +Q
Sbjct: 95 DWKSALQLPPKDARFKTEDVTATKG------NDFEDYYLKRELLMGIFEMGFEKPSPIQE 148
Query: 75 ECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEF 134
E IP A+ G D++ +AK+G GKTA +++ L++ +P + ALVL TRELA Q H
Sbjct: 149 EAIPVALAGRDILARAKNGTGKTAAYLIPVLERVDPKRNSIQALVLVPTRELALQTAHVC 208
Query: 135 ERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKNVRH 193
++ + ++V GG +++ D+L+ P I+V TPGR+L LA L +
Sbjct: 209 KQLGKRIDQLQVMSSTGGTSLR--DDILRLYNPVHILVATPGRVLDLAERGVCKLNECKM 266
Query: 194 FILDECDKMLESLDMRRDVQEIF-KMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYV 252
+LDE DK+L S++ ++ + + P ++Q+M+FSAT ++ +F + P E+ +
Sbjct: 267 VVLDEADKLL-SMEFTSVLERLIERFLPTNRQLMLFSATFPITVKAFRDRFQRKPYELNL 325
Query: 253 DDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECN 312
DE LTL G+ Q+Y + E +K LN + L NQ +IF SV+R L K + E
Sbjct: 326 MDE--LTLKGVTQYYAYVEENKKVACLNAIFSKLQINQSIIFCNSVNRVKLLAKKITELG 383
Query: 313 FPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTY 372
+ +H+ M+QE+R + F+ G R LV +DL RGIDI+ VN+VIN+D P +++TY
Sbjct: 384 YSCFYVHARMAQEDRNRVFHDFRNGACRNLVCSDLFTRGIDIQAVNVVINFDFPKNSETY 443
Query: 373 LHRVGRAGRFGTKGLAITFVS 393
LHRVGR+GRFG +GLAI+ ++
Sbjct: 444 LHRVGRSGRFGHRGLAISMIT 464
>gi|255712573|ref|XP_002552569.1| KLTH0C07964p [Lachancea thermotolerans]
gi|238933948|emb|CAR22131.1| KLTH0C07964p [Lachancea thermotolerans CBS 6340]
Length = 398
Score = 251 bits (640), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 137/351 (39%), Positives = 210/351 (59%), Gaps = 5/351 (1%)
Query: 45 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLST 104
S F LK +LLR + GFE PS +Q I Q I G DVI QA+SG GKTA F +
Sbjct: 22 SPTFESMHLKEDLLRGVYAYGFEAPSAIQSRAITQIISGRDVIAQAQSGTGKTATFTIGM 81
Query: 105 LQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKN 164
LQ + ++ +LVL TRELA QI Y+ +I GG ++ L +
Sbjct: 82 LQVIDFKSRELQSLVLSPTRELAKQISQVVGNLGDYM-NISAHACTGGKAMQTDTKKLTH 140
Query: 165 ECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML-ESLDMRRDVQEIFKMTPHDK 223
C +V GTPGR+L + + + L+ ++++ ILDE D++L E+L ++ + +IF P
Sbjct: 141 GC-HVVSGTPGRVLDMIKRRILNTRHLKMLILDEADELLSETLGFKQQIYDIFAKLPKSV 199
Query: 224 QVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDL 282
QV++ SAT+SK+I + KKFM DP++I V + +++L G+ Q+++ + E K L DL
Sbjct: 200 QVVVVSATMSKDILEITKKFMSDPVKILVKRD-EISLEGIKQYHVNVDREEWKFDTLCDL 258
Query: 283 LDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRIL 342
D+L Q VIF + L+ L++ NF +H M QE+R F+ G R+L
Sbjct: 259 YDSLTITQCVIFCNTKKVVDWLSSKLLQANFAVASMHGDMKQEDRDRVMNDFRSGTSRVL 318
Query: 343 VATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
++TD+ RGID+++V++VINYD+PD+ + Y+HR+GR+GRFG KG+AI F++
Sbjct: 319 ISTDVWARGIDVQQVSLVINYDLPDNLENYIHRIGRSGRFGRKGVAINFIT 369
>gi|302900149|ref|XP_003048204.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729136|gb|EEU42491.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 487
Score = 251 bits (640), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 141/347 (40%), Positives = 203/347 (58%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F +F LK +LL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ L++
Sbjct: 51 FENFALKRDLLMGIFEAGFEKPSPIQEEAIPVALTGRDILARAKNGTGKTAAFVIPALER 110
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
P ++ L+L TRELA Q + +L + V V GG ++ D+++ + P
Sbjct: 111 INPKVSKIQCLILVPTRELAMQTSQVCKTLGKHL-GVNVMVTTGGTGLR--DDIIRLQDP 167
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
IVVGTPGRIL LA L FI+DE DK+L S++ ++++ + P D+QVM
Sbjct: 168 VHIVVGTPGRILDLAGKNVADLSECPMFIMDEADKLL-SIEFTPVIEQLLQFHPKDRQVM 226
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K M P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 227 LFSATFPLSVKDFSDKNMVSPYEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFSKL 284
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q R + F+ G R LV +D
Sbjct: 285 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMQQHARNRVFHDFRNGVCRNLVCSD 344
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GR+G GLAI ++
Sbjct: 345 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLIN 391
>gi|145491907|ref|XP_001431952.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399059|emb|CAK64554.1| unnamed protein product [Paramecium tetraurelia]
Length = 408
Score = 251 bits (640), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 138/360 (38%), Positives = 219/360 (60%), Gaps = 9/360 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F +F LK EL++ + S +E PS +Q E IP A+ G ++I +AK+G GKT +++ L+
Sbjct: 39 FEEFDLKQELMQGLAASNYEKPSPIQEESIPFALAGSNIIARAKNGTGKTGAYIIPILEM 98
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
E GQ+ +L+L TRELA Q+ + Y+ ++ V GG + K +D+ + +
Sbjct: 99 LEVE-GQIQSLILVPTRELALQVSSLVKEIGKYM-KVECMVSTGGTDFK--EDIYRLKQV 154
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
++VGTPGRIL LA+ K L ++HF+LDE DK+L S+D + + +I + P + Q+M
Sbjct: 155 VHVLVGTPGRILDLAQRKLADLSKLKHFVLDEADKLL-SVDFQPLIVKILQFAPPEVQIM 213
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
MFSAT +++ + + EI + +E LTL G+ Q+Y+ + E +K LN + L
Sbjct: 214 MFSATFPVDVKGFINEHVPQIQEINLMEE--LTLKGVTQYYLFIDEKQKVNCLNFIFSKL 271
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
+ NQ +IF S R L + + E + IH+ M+Q++R + F++ R LV+TD
Sbjct: 272 EINQAIIFCNSARRVELLTQKITEFGYSCFYIHAKMNQKDRNKVFHSFRKAVGRCLVSTD 331
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
L RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLA+ F++ +D D L Q+ +
Sbjct: 332 LFTRGIDIQSVNVVINFDFPRTAETYLHRIGRSGRFGHLGLAVNFITE-TDKDTLVQIEQ 390
>gi|398022937|ref|XP_003864630.1| ATP-dependent DEAD-box RNA helicase, putative [Leishmania donovani]
gi|322502866|emb|CBZ37948.1| ATP-dependent DEAD-box RNA helicase, putative [Leishmania donovani]
Length = 405
Score = 251 bits (640), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 138/348 (39%), Positives = 205/348 (58%), Gaps = 6/348 (1%)
Query: 47 GFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQ 106
F ++ L+ EL I + GFE PS VQ E IP A+ G DV+ +AK+G GKTA FV+ L+
Sbjct: 31 NFEEYALRRELQMGIFEKGFEKPSPVQEEAIPVALQGKDVLARAKNGTGKTASFVIPVLE 90
Query: 107 QTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NE 165
+ + V AL++ TRELA Q + ++P ++V V GG ++ D+L+
Sbjct: 91 KVDTRESYVQALLMVPTRELALQTAQVTKELGKHIPGLEVMVTTGGTTLR--DDILRLTS 148
Query: 166 CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQV 225
I+V TPGR+L LA K + L + +LDE DK+L S + + +++ P Q
Sbjct: 149 KVHILVATPGRVLDLASKKAVDLSHCHILVLDEADKLL-SQEFMEIIDDLYTYLPSQLQS 207
Query: 226 MMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDA 285
M+FSAT ++ ++ + +P EI + DE LTL G+ Q+Y + E +K LN L +
Sbjct: 208 MLFSATFPVTVKTFAERHLHNPYEINLMDE--LTLKGVTQYYAFVEERQKIHCLNTLFNK 265
Query: 286 LDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVAT 345
L NQ +IF SV+R L K + + + IH+ M Q+ R + F+EG+ R LV +
Sbjct: 266 LQINQSIIFCNSVNRVELLAKKITQLGYSCYYIHARMQQQHRNRVFHDFREGHCRNLVCS 325
Query: 346 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
DL+ RGIDI+ VN+VIN+D P A+TYLHR+GR+GRFG G+AI FV+
Sbjct: 326 DLITRGIDIQAVNVVINFDFPKYAETYLHRIGRSGRFGHLGVAINFVT 373
>gi|401429120|ref|XP_003879042.1| putative ATP-dependent DEAD-box RNA helicase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322495292|emb|CBZ30595.1| putative ATP-dependent DEAD-box RNA helicase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 405
Score = 251 bits (640), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 138/348 (39%), Positives = 205/348 (58%), Gaps = 6/348 (1%)
Query: 47 GFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQ 106
F ++ L+ EL I + GFE PS VQ E IP A+ G DV+ +AK+G GKTA FV+ L+
Sbjct: 31 NFEEYALRRELQMGIFEKGFEKPSPVQEEAIPVALQGKDVLARAKNGTGKTASFVIPVLE 90
Query: 107 QTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NE 165
+ + V AL++ TRELA Q + ++P ++V V GG ++ D+L+
Sbjct: 91 KVDTRESYVQALLMVPTRELALQTAQVTKELGKHIPGLEVMVTTGGTTLR--DDILRLTS 148
Query: 166 CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQV 225
I+V TPGR+L LA K + L + +LDE DK+L S + + +++ P Q
Sbjct: 149 KVHILVATPGRVLDLASKKAVDLSHCHILVLDEADKLL-SQEFMEIIDDLYTYLPSQLQS 207
Query: 226 MMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDA 285
M+FSAT ++ ++ + +P EI + DE LTL G+ Q+Y + E +K LN L +
Sbjct: 208 MLFSATFPVTVKTFAERHLHNPYEINLMDE--LTLKGVTQYYAFVEERQKIHCLNTLFNK 265
Query: 286 LDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVAT 345
L NQ +IF SV+R L K + + + IH+ M Q+ R + F+EG+ R LV +
Sbjct: 266 LQINQSIIFCNSVNRVELLAKKITQLGYSCYYIHARMQQQHRNRVFHDFREGHCRNLVCS 325
Query: 346 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
DL+ RGIDI+ VN+VIN+D P A+TYLHR+GR+GRFG G+AI FV+
Sbjct: 326 DLITRGIDIQAVNVVINFDFPKYAETYLHRIGRSGRFGHLGVAINFVT 373
>gi|302839218|ref|XP_002951166.1| DEAD-box RNA helicase, ATP-dependent, cytoplasmic [Volvox carteri
f. nagariensis]
gi|300263495|gb|EFJ47695.1| DEAD-box RNA helicase, ATP-dependent, cytoplasmic [Volvox carteri
f. nagariensis]
Length = 406
Score = 251 bits (640), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 143/380 (37%), Positives = 217/380 (57%), Gaps = 13/380 (3%)
Query: 15 DYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQH 74
D++ P + A KG + F D+ LK ELL I + GFE PS +Q
Sbjct: 7 DWKTRLNLPPKDARVRTEDVTATKG------NEFEDYFLKRELLMGIFEKGFEKPSPIQE 60
Query: 75 ECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEF 134
E IP A+ G D++ +AK+G GKTA F + L++ +P + AL+L TRELA Q
Sbjct: 61 ESIPIALAGRDILARAKNGTGKTAAFCIPVLERVDPTRSVIQALLLVPTRELALQTAQVC 120
Query: 135 ERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKNVRH 193
+ + YL +++V V GG ++K D+++ + IVV TPGR++ LA L +
Sbjct: 121 KELAKYL-NVEVMVTTGGTSLK--DDIMRLYQTTHIVVATPGRVVDLAGKGVARLNECKM 177
Query: 194 FILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVD 253
++DE DK+L S + + V+++ P D+Q+M++SAT ++ +KF++ P I +
Sbjct: 178 LVMDEADKLL-SPEFQPVVEQLIGFLPEDRQIMLYSATFPVTVKAFKEKFLRKPYIINLM 236
Query: 254 DEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNF 313
+E LTL G+ Q+Y + E +K LN L L NQ +IF SV+R L K + E +
Sbjct: 237 EE--LTLKGVTQYYAFVEEKQKVHCLNTLFSKLRINQSIIFCNSVNRVELLAKKITELGY 294
Query: 314 PSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYL 373
IH+ M Q R + F+ G+ R LV++DL RGIDI+ VN+VIN+D P +A+TYL
Sbjct: 295 SCYYIHAKMLQSHRNRVFHDFRNGHCRNLVSSDLFTRGIDIQSVNVVINFDFPKNAETYL 354
Query: 374 HRVGRAGRFGTKGLAITFVS 393
HRVGR+GRFG GLA+ ++
Sbjct: 355 HRVGRSGRFGHLGLAVNLIT 374
>gi|410906647|ref|XP_003966803.1| PREDICTED: eukaryotic initiation factor 4A-II-like [Takifugu
rubripes]
Length = 404
Score = 251 bits (640), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 146/366 (39%), Positives = 215/366 (58%), Gaps = 5/366 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK LLR I GFE PS +Q I I G DVI QA+SG GKTA FV+S LQ+
Sbjct: 32 FDDMNLKENLLRGIYAYGFEKPSAIQQRAIVPCIEGNDVIAQAQSGTGKTATFVISILQR 91
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ + + AL+L TRELA QI YL + A GG N++ L+ P
Sbjct: 92 IDMSLKETQALILAPTRELAQQIHKVVMALGDYLNCVCHACI-GGTNVRADILKLQATSP 150
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+ + + K + ++ F+LDE D+ML S + + EIF+ P D QV++
Sbjct: 151 QIVVGTPGRVFDMIKRKVVHPDCIKMFVLDEADEML-SRGFKDQIYEIFQELPTDIQVVL 209
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDAL 286
SAT+ ++ V KFM+DP+ I V E +L+L G+ Q YI + + E K L DL + L
Sbjct: 210 LSATIPVDVLEVTTKFMRDPIRILVKKE-ELSLEGIRQFYIDVCKEEWKLDTLTDLYETL 268
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
Q VIFV + + L + + E +F +H M Q++R K F+ G+ R+L+ TD
Sbjct: 269 TITQAVIFVNTKRKVDWLTEKMKEKDFTVSAMHGDMEQKDRDLIMKEFRSGSSRVLITTD 328
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
L+ RGID+++V++VINYD+P + + Y+HR+GR+GRFG KG++I +++ D ++ +
Sbjct: 329 LLARGIDVQQVSLVINYDLPANRENYIHRIGRSGRFGRKGVSINLLTT-EDVRVVKDIET 387
Query: 407 FMFLLI 412
F +I
Sbjct: 388 FYNTII 393
>gi|385653332|ref|ZP_10047885.1| superfamily II DNA and RNA helicase, partial [Leucobacter
chromiiresistens JG 31]
Length = 608
Score = 251 bits (640), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 129/346 (37%), Positives = 203/346 (58%), Gaps = 3/346 (0%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D L PE+LRA+ D G+E PS +Q IP + G DV+ A++G GKTA F L L +
Sbjct: 20 FADLGLAPEVLRAVTDVGYETPSAIQAATIPTLLEGADVVGLAQTGTGKTAAFALPILSR 79
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
P G ALVL TRELA Q+C FE ++ +LP++ + YGG L+
Sbjct: 80 ITPGQGVPQALVLAPTRELALQVCEAFESYAAHLPEVHLLPVYGGQAYGQQLSALRRGV- 138
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
IVVGTPGRI+ + L L +++ +LDE D+ML+ + DV+ I TP +KQV +
Sbjct: 139 DIVVGTPGRIMDHLKRGSLDLTQIKYLVLDEADEMLK-MGFAEDVETILADTPQEKQVAL 197
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ +IR + ++++ DP EI + + + T + Q Y +S +K L +L+ D
Sbjct: 198 FSATMPAQIRRISQQYLNDPREIKIAGKTQ-TSSTITQRYNVVSYTQKLDALTRILEVED 256
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +++F ++ + ++ + L + + I+ + Q +R + K+G ILVATD+
Sbjct: 257 FDAMIVFTRTRGDSEQVAEKLRARGYSAAAINGDIPQAQRERTVQSLKDGKLDILVATDV 316
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
RG+D+ER++ V+NYD+P ++Y+HR+GR GR G G AI+FV+
Sbjct: 317 AARGLDVERISHVLNYDLPIDTESYVHRIGRTGRAGRTGDAISFVT 362
>gi|164659183|ref|XP_001730716.1| hypothetical protein MGL_2170 [Malassezia globosa CBS 7966]
gi|159104613|gb|EDP43502.1| hypothetical protein MGL_2170 [Malassezia globosa CBS 7966]
Length = 502
Score = 250 bits (639), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 148/373 (39%), Positives = 210/373 (56%), Gaps = 21/373 (5%)
Query: 22 QAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAI 81
Q D ATK N F DF LK ELL I ++GFEHPS +Q E IP A+
Sbjct: 20 QTEDVTATKGND--------------FEDFFLKRELLMGIFEAGFEHPSPIQEEAIPIAL 65
Query: 82 LGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYL 141
G DV+ +AK+G GKTA +V+ TL++ ++ A++L TRELA Q + +L
Sbjct: 66 SGRDVLARAKNGTGKTAAYVIPTLERVNTKKNKIQAVLLVPTRELALQTSQVAKTLGKHL 125
Query: 142 PDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECD 200
I++ V GG +K D+L+ + I+VGTPGRIL LA L +++DE D
Sbjct: 126 -GIEIMVSTGGTTLK--DDILRLGQTVHILVGTPGRILDLASKGIADLSQCTTYVMDEAD 182
Query: 201 KMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTL 260
K+L S + ++++ + P ++QVM+FSAT ++ K M P EI + DE LTL
Sbjct: 183 KLL-SPEFTPVMEQLLGLLPKERQVMLFSATFPLIVKDFKDKHMVKPYEINLMDE--LTL 239
Query: 261 HGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHS 320
G+ Q+Y + E +K LN L L NQ +IF S +R L K + E + H+
Sbjct: 240 RGVTQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHA 299
Query: 321 GMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAG 380
M Q R + F+ G R LV +DL+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+G
Sbjct: 300 KMLQAHRNRVFHDFRNGACRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSG 359
Query: 381 RFGTKGLAITFVS 393
RFG GLAI ++
Sbjct: 360 RFGHMGLAINLIT 372
>gi|344228534|gb|EGV60420.1| dead Box protein Dhh1p [Candida tenuis ATCC 10573]
Length = 501
Score = 250 bits (638), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 141/347 (40%), Positives = 203/347 (58%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK ELL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TLQ
Sbjct: 32 FEDLGLKRELLMGIFEAGFEKPSPIQEESIPIALTGRDILARAKNGTGKTASFVIPTLQM 91
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
+P ++ L+L TRELA Q +L I+ V GG +K D+L+ N+
Sbjct: 92 IKPKVNKIQGLILVPTRELALQTSQVVRTLGKHL-GIQCMVSTGGTPVK--DDILRLNDP 148
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
++VGTPGRIL LA + F++DE DKML S + +R ++ I ++ P ++Q +
Sbjct: 149 VHVLVGTPGRILDLASRNIADMSECSLFVMDEADKML-SREFKRTIERILELFPSNRQSL 207
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ ++ + P EI + DE LTL G+ Q Y + E +K LN L L
Sbjct: 208 LFSATFPLAVKSFMEEHLNKPYEINLMDE--LTLKGISQFYAFVDEKQKLHCLNTLFSKL 265
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q+ R + F+ G R LV +D
Sbjct: 266 QINQSIIFCNSTNRVELLAKKITELGYSCYYSHARMPQQARNKVFHEFRMGKVRNLVCSD 325
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLA+ +S
Sbjct: 326 LLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAVNLLS 372
>gi|224064015|ref|XP_002301349.1| predicted protein [Populus trichocarpa]
gi|222843075|gb|EEE80622.1| predicted protein [Populus trichocarpa]
Length = 499
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 146/390 (37%), Positives = 220/390 (56%), Gaps = 18/390 (4%)
Query: 10 EDELLDYEEEDAQA-----PDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDS 64
+ E +D +D +A P + A KG + F D+ LK ELL I +
Sbjct: 90 QSEAVDSSSQDWKAKLKIPPADTRYRTEDVTATKG------NDFEDYFLKRELLMGIYEK 143
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFE PS +Q E IP A+ G D++ +AK+G GKTA F + L++ + + + ++L TR
Sbjct: 144 GFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCVPALEKIDQDNNFIQVVILVPTR 203
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARD 183
ELA Q + +L I+V GG ++K D+++ P ++VGTPGRIL LA+
Sbjct: 204 ELALQTSQVCKELGKHL-KIQVMATTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLAKK 260
Query: 184 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF 243
LKN +LDE DK+L S + + ++++ + P ++Q++MFSAT ++ ++
Sbjct: 261 GVCILKNCSMLVLDEADKLL-SPEFQPSIEQLIRFLPSNRQILMFSATFPVTVKDFKDRY 319
Query: 244 MQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAE 303
++ P I + DE LTL G+ Q+Y + E +K LN L L NQ +IF SV+R
Sbjct: 320 LEKPYVINLMDE--LTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVEL 377
Query: 304 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 363
L K + E + IH+ M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+
Sbjct: 378 LAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINF 437
Query: 364 DMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
D P +A+TYLHRVGR+GRFG GLA+ ++
Sbjct: 438 DFPKNAETYLHRVGRSGRFGHLGLAVNLIT 467
>gi|340057010|emb|CCC51350.1| putative ATP-dependent DEAD-box RNA helicase [Trypanosoma vivax
Y486]
Length = 410
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 134/347 (38%), Positives = 209/347 (60%), Gaps = 6/347 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F ++ L+ EL I + GFE PS VQ E IP A+ G DV+ +AK+G GKTA FV+ L++
Sbjct: 37 FEEYGLRRELQMGIFEKGFERPSPVQEEAIPVALQGKDVLARAKNGTGKTASFVIPVLEK 96
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
+ + + AL++ TRELA Q + ++ ++V V GG ++ D+L+
Sbjct: 97 VDTHEPHIQALLMVPTRELALQTAQVTKELGKHISGLEVMVTTGGTTLR--DDILRLQHA 154
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
++V TPGR++ LA + L R +LDE DK+L S + + ++E++ P D+Q +
Sbjct: 155 VHVLVATPGRVVDLASKRTARLDRCRIVVLDEADKLL-SHEFTQLMKELYDYLPQDRQSL 213
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K++++P EI + +E LTL G+ Q+Y + E +K LN L + L
Sbjct: 214 LFSATFPVTVKDFADKYLRNPYEINLMEE--LTLRGVTQYYAFVEERQKIHCLNTLFNRL 271
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF SV+R L K + + + IH+ M Q+ R + F+EG+ R LV +D
Sbjct: 272 QINQSIIFCNSVNRVELLAKKITQLGYSCYYIHARMQQQHRNRVFHDFREGHCRNLVCSD 331
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P A+TYLHR+GR+GRFG GLA+ F++
Sbjct: 332 LITRGIDIQAVNVVINFDFPKYAETYLHRIGRSGRFGHLGLAVNFIT 378
>gi|146100408|ref|XP_001468856.1| putative ATP-dependent DEAD-box RNA helicase [Leishmania infantum
JPCM5]
gi|134073225|emb|CAM71946.1| putative ATP-dependent DEAD-box RNA helicase [Leishmania infantum
JPCM5]
Length = 405
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 137/348 (39%), Positives = 205/348 (58%), Gaps = 6/348 (1%)
Query: 47 GFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQ 106
F ++ L+ EL I + GFE PS VQ E IP A+ G DV+ +AK+G GKTA FV+ L+
Sbjct: 31 NFEEYALRRELQMGIFEKGFEKPSPVQEEAIPVALQGKDVLARAKNGTGKTASFVIPVLE 90
Query: 107 QTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NE 165
+ + V AL++ TRELA Q + ++P ++V V GG ++ D+L+
Sbjct: 91 KVDTRESYVQALLMVPTRELALQTAQVTKELGKHIPGLEVMVTTGGTTLR--DDILRLTS 148
Query: 166 CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQV 225
I+V TPGR+L LA K + L + +LDE DK+L S + + +++ P Q
Sbjct: 149 KVHILVATPGRVLDLASKKAVDLSHCHILVLDEADKLL-SQEFMEIIDDLYTYLPSQLQS 207
Query: 226 MMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDA 285
M+FSAT ++ ++ + +P EI + DE LTL G+ Q+Y + E +K LN L +
Sbjct: 208 MLFSATFPVTVKTFAERHLHNPYEINLMDE--LTLKGVTQYYAFVEERQKIHCLNTLFNK 265
Query: 286 LDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVAT 345
L NQ +IF SV+R L K + + + IH+ M Q+ R + F+EG+ R LV +
Sbjct: 266 LQINQSIIFCNSVNRVELLAKKITQLGYSCYYIHARMQQQHRNRVFHDFREGHCRNLVCS 325
Query: 346 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
DL+ RGIDI+ VN+VIN+D P ++TYLHR+GR+GRFG G+AI FV+
Sbjct: 326 DLITRGIDIQAVNVVINFDFPKYSETYLHRIGRSGRFGHLGVAINFVT 373
>gi|3776001|emb|CAA09203.1| RNA helicase [Arabidopsis thaliana]
Length = 498
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 142/373 (38%), Positives = 214/373 (57%), Gaps = 21/373 (5%)
Query: 22 QAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAI 81
Q D ATK N F ++ LK +LL+ I + GFE PS +Q E IP A+
Sbjct: 114 QTADVTATKGNE--------------FENYFLKRDLLKGIYEKGFEKPSPIQEESIPIAL 159
Query: 82 LGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYL 141
G D++ +AK+G GKT F + L++ +PN + A++L TRELA Q + S YL
Sbjct: 160 TGSDILARAKNGTGKTGAFCIPVLEKIDPNNNVIQAMILVPTRELALQTSQVCKELSKYL 219
Query: 142 PDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKNVRHFILDECD 200
+I+V V GG +++ D+++ P ++VGTPGRIL L + LK+ ++DE D
Sbjct: 220 -NIQVMVTTGGTSLR--DDIMRLHQPVHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEAD 276
Query: 201 KMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTL 260
K+L S + + ++E+ + P ++Q +MFSAT ++ + ++ P I + D+ LTL
Sbjct: 277 KLL-SAEFQPSLEELIQFLPQNRQFLMFSATFPVTVKAFKDRHLRKPYVINLMDQ--LTL 333
Query: 261 HGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHS 320
G+ Q+Y + E +K LN L L NQ +IF SV+R L K + E + IH+
Sbjct: 334 MGVTQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHA 393
Query: 321 GMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAG 380
M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+D P ++++YLHRVGR+G
Sbjct: 394 KMVQDHRNRVFHEFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSG 453
Query: 381 RFGTKGLAITFVS 393
RFG GLA+ V+
Sbjct: 454 RFGHLGLAVNLVT 466
>gi|67484120|ref|XP_657280.1| DEAD/DEAH box helicase [Entamoeba histolytica HM-1:IMSS]
gi|167395584|ref|XP_001741647.1| ATP-dependent RNA helicase eIF4A [Entamoeba dispar SAW760]
gi|56474536|gb|EAL51901.1| DEAD/DEAH box helicase, putative [Entamoeba histolytica HM-1:IMSS]
gi|165893771|gb|EDR21906.1| ATP-dependent RNA helicase eIF4A, putative [Entamoeba dispar
SAW760]
gi|407041400|gb|EKE40712.1| DEAD/DEAH box helicase, putative [Entamoeba nuttalli P19]
gi|449705837|gb|EMD45802.1| ATP-dependent RNA helicase eIF4A, putative [Entamoeba histolytica
KU27]
Length = 391
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 143/355 (40%), Positives = 212/355 (59%), Gaps = 6/355 (1%)
Query: 53 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNP 112
+K ELLR+I GFE PS +Q I + G ++I QA+SG GKTA F + LQQ + N
Sbjct: 25 IKDELLRSIYSYGFEKPSAIQQRAIVPLMQGRNLIAQAQSGTGKTAAFSIGVLQQIDTNS 84
Query: 113 GQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVG 172
A++L TRELA Q + S YL DIK GG +++ + L+N Q+VVG
Sbjct: 85 KVCQAILLSPTRELALQTQEVVKNLSQYL-DIKTFACIGGTSVRETIEALRNGV-QVVVG 142
Query: 173 TPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATL 232
TPGR+L + + + V++ ILDE D+ML S + + I K P QV MFSAT+
Sbjct: 143 TPGRVLDMLDRQAIDPNTVKYLILDEADEML-SQGFKDQMYTILKSLPSTVQVGMFSATM 201
Query: 233 SKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQV 291
+ + KKFM++P++I V E +LTL G+ Q YI + + E K L DL + NQ
Sbjct: 202 PADALDISKKFMENPVKILVKKE-ELTLEGIKQFYIDVVKDEYKIDTLIDLYQVISVNQS 260
Query: 292 VIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRG 351
VIF S +R + + L N+P H ++ EER F++G RIL+ TD++ RG
Sbjct: 261 VIFCNSKNRVEWIQRRLQAHNYPVSITHGDLTMEERNNVLNEFRQGATRILITTDMLSRG 320
Query: 352 IDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
ID+++V++VIN+DMP S ++Y+HR+GR+ RFG KG+AI F+++ + D +N++ K
Sbjct: 321 IDVQQVSLVINFDMPVSDESYIHRIGRSARFGRKGVAIDFITT-EEMDTINRLQK 374
>gi|346322833|gb|EGX92431.1| ATP dependent RNA helicase (Dhh1), putative [Cordyceps militaris
CM01]
Length = 1261
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 142/356 (39%), Positives = 205/356 (57%), Gaps = 7/356 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F +F LK +LL I ++GFE PS +Q E IP A+ G DV+ +AK+G GKTA FV+ L++
Sbjct: 809 FENFALKRDLLMGIFEAGFEKPSPIQEEAIPVALTGRDVLARAKNGTGKTAAFVIPVLER 868
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
P ++ L+L TRELA Q + +L + V V GG ++ D+++ + P
Sbjct: 869 INPKVNKIQCLILVPTRELAMQTSQVCKTLGKHL-GVNVMVTTGGTGLR--DDIIRLQEP 925
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
IVVGTPGRIL LA L FI+DE DK+L S + ++++ + P D+QVM
Sbjct: 926 VHIVVGTPGRILDLAGKNVADLSECPMFIMDEADKLL-SAEFTPTIEQLLQFHPKDRQVM 984
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ + M P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 985 LFSATFPLSVKDFSDRNMSSPYEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFSKL 1042
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q R + F+ G R LV +D
Sbjct: 1043 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHARMQQLARNRVFHDFRNGVCRNLVCSD 1102
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILN 402
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GR+G GLAI ++ ++ N
Sbjct: 1103 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLINWEDRFNLYN 1158
>gi|340966801|gb|EGS22308.1| ATP-dependent RNA helicase-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 554
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 140/356 (39%), Positives = 207/356 (58%), Gaps = 7/356 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
+ DF LK +LL+ I ++G+E PS +Q E IP A+ G D++ +AK+G GKTA FV+ L++
Sbjct: 44 WEDFNLKRDLLKGIFEAGYEKPSPIQEESIPIALAGRDILARAKNGTGKTAAFVIPALEK 103
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
P ++ L+L TRELA Q + +L + V V GG ++ D+++ +
Sbjct: 104 INPKVSKIQCLILVPTRELAMQTSQVCKILGKHL-GVNVMVTTGGTGLR--DDIVRLQDA 160
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
IVVGTPGRIL LA + L FI+DE DK+L S + ++++ + P D+QVM
Sbjct: 161 VHIVVGTPGRILDLASKQVADLSECPMFIMDEADKLL-SPEFTPVIEQLLQFHPKDRQVM 219
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ M+DP EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 220 LFSATFPISVKAFSDNNMRDPYEINLMDE--LTLRGITQYYAYVEERQKVHCLNTLFSKL 277
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q R + F+ G R LV +D
Sbjct: 278 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMPQAARNRVFHDFRNGVCRNLVCSD 337
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILN 402
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GR+G GLAI ++ ++ N
Sbjct: 338 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLINWDDRFNLYN 393
>gi|255729496|ref|XP_002549673.1| hypothetical protein CTRG_03970 [Candida tropicalis MYA-3404]
gi|240132742|gb|EER32299.1| hypothetical protein CTRG_03970 [Candida tropicalis MYA-3404]
Length = 554
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 141/347 (40%), Positives = 205/347 (59%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F DF LK ELL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA F++ LQ
Sbjct: 32 FEDFNLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDILARAKNGTGKTASFIIPCLQL 91
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P +V AL+L TRELA Q +L ++ V GG +++ D+++ P
Sbjct: 92 VKPKLNKVQALILVPTRELALQTSQVVRTLGKHL-GVQCMVTTGGTSLR--DDIVRLHDP 148
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
I+VGTPGR+L LA K + L F++DE DKML S + + +++I + P ++Q +
Sbjct: 149 VHILVGTPGRVLDLAARKVVDLSECPLFVMDEADKML-SREFKGIIEQILEFFPANRQAL 207
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ + + P EI + DE LTL G+ Q Y + E +K LN L L
Sbjct: 208 LFSATFPLAVKSFMDQHLNKPYEINLMDE--LTLKGISQFYAFVEEKQKLHCLNTLFSKL 265
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q+ R + F++G R LV +D
Sbjct: 266 QINQSIIFCNSTNRVELLAKKITELGYSCYYSHAKMPQQARNKVFHEFRQGKVRNLVCSD 325
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI +S
Sbjct: 326 LLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLMS 372
>gi|376260079|ref|YP_005146799.1| DNA/RNA helicase [Clostridium sp. BNL1100]
gi|373944073|gb|AEY64994.1| DNA/RNA helicase, superfamily II [Clostridium sp. BNL1100]
Length = 564
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 133/346 (38%), Positives = 200/346 (57%), Gaps = 3/346 (0%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F+D L E+ RAIVD GFE + +Q + IP + G D+I QA++G GKT F + +++
Sbjct: 6 FKDLTLSDEVQRAIVDMGFEEATPIQSQSIPYILEGNDLIGQAQTGTGKTCAFGIPAVEK 65
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P + LVLC TRELA Q C E Y I++ YGG I LK P
Sbjct: 66 IDPQIDSIQVLVLCPTRELAIQSCEELRNVLKYKDGIRILPVYGGQPIDRQIMALKKR-P 124
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QI++GTPGR++ R + L L+ ++ +LDE D+ML ++ R D+ I + P D+Q ++
Sbjct: 125 QIIIGTPGRVMDHMRRRTLKLEALKMIVLDEADEML-NMGFREDIDTILEKVPEDRQTIL 183
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ KEI + KK+ +DP+ I + + +LT+ + Q+Y+++ E K L+ L+D D
Sbjct: 184 FSATMPKEILELTKKYQKDPVHIKIAHK-ELTVPSIEQYYLEVKESAKLEVLSRLIDTND 242
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
++F + R EL L F + +H M QE R F++GN IL+ATD+
Sbjct: 243 IKLSLVFCNTKKRVDELTASLQSRGFSAEALHGDMRQEHRDKVMSLFRKGNFDILIATDV 302
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
RGID++ V V NYD+P+ + Y+HR+GR GR G G A TF+S
Sbjct: 303 AARGIDVDDVEAVFNYDLPNDEEYYVHRIGRTGRAGRTGKAFTFIS 348
>gi|389594423|ref|XP_003722434.1| putative ATP-dependent DEAD-box RNA helicase [Leishmania major
strain Friedlin]
gi|323363662|emb|CBZ12667.1| putative ATP-dependent DEAD-box RNA helicase [Leishmania major
strain Friedlin]
Length = 405
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 138/348 (39%), Positives = 205/348 (58%), Gaps = 6/348 (1%)
Query: 47 GFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQ 106
F ++ L+ EL I + GFE PS VQ E IP A+ G DV+ +AK+G GKTA FV+ L+
Sbjct: 31 NFEEYALRRELQMGIFEKGFEKPSPVQEEAIPVALQGKDVLARAKNGTGKTASFVIPVLE 90
Query: 107 QTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NE 165
+ + V AL++ TRELA Q + ++P ++V V GG ++ D+L+
Sbjct: 91 KVDTRELYVQALLMVPTRELALQTAQVTKELGKHIPGLEVMVTTGGTTLR--DDILRLTS 148
Query: 166 CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQV 225
I+V TPGR+L LA K + L + +LDE DK+L S + + +++ P Q
Sbjct: 149 KVHILVATPGRVLDLASKKAVDLSHCHILVLDEADKLL-SQEFMEIIDDLYTYLPSQLQS 207
Query: 226 MMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDA 285
M+FSAT ++ ++ + +P EI + DE LTL G+ Q+Y + E +K LN L +
Sbjct: 208 MLFSATFPVTVKTFAERHLHNPYEINLMDE--LTLKGVTQYYAFVEERQKIHCLNTLFNK 265
Query: 286 LDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVAT 345
L NQ +IF SV+R L K + + + IH+ M Q+ R + F+EG+ R LV +
Sbjct: 266 LQINQSIIFCNSVNRVELLAKKITQLGYSCYYIHARMQQQHRNRVFHDFREGHCRNLVCS 325
Query: 346 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
DL+ RGIDI+ VN+VIN+D P A+TYLHR+GR+GRFG G+AI FV+
Sbjct: 326 DLITRGIDIQAVNVVINFDFPKYAETYLHRIGRSGRFGHLGVAINFVT 373
>gi|255541534|ref|XP_002511831.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223549011|gb|EEF50500.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 507
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 148/390 (37%), Positives = 219/390 (56%), Gaps = 18/390 (4%)
Query: 10 EDELLDYEEEDAQA-----PDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDS 64
+ E +D +D +A P K A KG + F D+ LK ELL I +
Sbjct: 98 QSEAVDSTSQDWKARLKIPPPDTRYKTEDVTATKG------NEFEDYFLKRELLMGIYEK 151
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFE PS +Q E IP A+ G D++ +AK+G GKTA F + L++ + + + ++L TR
Sbjct: 152 GFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTR 211
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARD 183
ELA Q + +L I+V V GG ++K D+++ P ++VGTPGRIL LA+
Sbjct: 212 ELALQTSQVCKELGKHL-KIQVMVTTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLAKK 268
Query: 184 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF 243
LK+ ++DE DK+L S + + V+++ + P +Q++MFSAT ++ +F
Sbjct: 269 GVCVLKDCSMLVMDEADKLL-SPEFQPSVEQLIRFLPPTRQILMFSATFPVTVKDFKDRF 327
Query: 244 MQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAE 303
+Q P I + DE LTL G+ Q Y + E +K LN L L NQ +IF SV+R
Sbjct: 328 LQKPYVINLMDE--LTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVEL 385
Query: 304 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 363
L K + E + IH+ M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+
Sbjct: 386 LAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINF 445
Query: 364 DMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
D P +++TYLHRVGR+GRFG GLA+ ++
Sbjct: 446 DFPKNSETYLHRVGRSGRFGHLGLAVNLIT 475
>gi|268573672|ref|XP_002641813.1| C. briggsae CBR-INF-1 protein [Caenorhabditis briggsae]
Length = 402
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 139/361 (38%), Positives = 213/361 (59%), Gaps = 6/361 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK ELLR I GFE PS +Q I G DVI QA+SG GKTA F +S LQ+
Sbjct: 31 FDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQR 90
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ + V ALV+ TRELA QI YL ++ + GG +++ + L+N
Sbjct: 91 IDHSDPHVQALVMAPTRELAQQIQKVMSALGEYL-NVNILPCIGGTSVRDDQRKLENGI- 148
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
+VVGTPGR+ + L ++ F+LDE D+ML S + + ++F+ P D QV++
Sbjct: 149 HVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEML-SRGFKDQIYDVFRSMPQDVQVVL 207
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDAL 286
SAT+ E+ V +FM++P+ I V + +LTL G+ Q YI + + E K L DL + +
Sbjct: 208 LSATMPAEVLDVTDRFMRNPIRILVKKD-ELTLEGIRQFYINVQKDEWKFDCLCDLYNVV 266
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
+ Q VIF + + +L + + F C+H M Q ER T + F+ G+ R+L+ TD
Sbjct: 267 NVTQAVIFCNTRRKVDQLTEQMTSKQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTD 326
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
++ RGID+++V++VINYD+P + + Y+HR+GR+GRFG KG+AI FV+ +D+ L ++
Sbjct: 327 ILARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTE-NDARQLKEIET 385
Query: 407 F 407
+
Sbjct: 386 Y 386
>gi|297817434|ref|XP_002876600.1| hypothetical protein ARALYDRAFT_486601 [Arabidopsis lyrata subsp.
lyrata]
gi|297322438|gb|EFH52859.1| hypothetical protein ARALYDRAFT_486601 [Arabidopsis lyrata subsp.
lyrata]
Length = 494
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 142/373 (38%), Positives = 214/373 (57%), Gaps = 21/373 (5%)
Query: 22 QAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAI 81
Q D ATK N F D+ LK +LL+ I + GFE PS +Q E IP A+
Sbjct: 110 QTADVTATKGNE--------------FEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIAL 155
Query: 82 LGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYL 141
G D++ +AK+G GKT F + L++ +P+ + A++L TRELA Q + S YL
Sbjct: 156 TGSDILARAKNGTGKTGAFCIPVLEKIDPSNNVIQAMILVPTRELALQTSQVCKELSKYL 215
Query: 142 PDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKNVRHFILDECD 200
+I+V V GG +++ D+++ P ++VGTPGRIL L + LK+ ++DE D
Sbjct: 216 -NIQVMVTTGGTSLR--DDIMRLHQPVHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEAD 272
Query: 201 KMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTL 260
K+L S + + ++E+ + P ++Q +MFSAT ++ + ++ P I + D+ LTL
Sbjct: 273 KLL-SAEFQPSLEELIQFLPQNRQFLMFSATFPVTVKAFKDRHLRKPYVINLMDQ--LTL 329
Query: 261 HGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHS 320
G+ Q+Y + E +K LN L L NQ +IF SV+R L K + E + IH+
Sbjct: 330 MGVTQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHA 389
Query: 321 GMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAG 380
M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+D P ++++YLHRVGR+G
Sbjct: 390 KMVQDHRNRVFHEFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSG 449
Query: 381 RFGTKGLAITFVS 393
RFG GLA+ V+
Sbjct: 450 RFGHLGLAVNLVT 462
>gi|51317205|gb|AAT99858.1| unknown [Diachasmimorpha longicaudata entomopoxvirus]
Length = 379
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 137/343 (39%), Positives = 210/343 (61%), Gaps = 7/343 (2%)
Query: 53 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNP 112
LK +L+ I GFE PS +Q + I I G DVI QA+SG GKTA + +S LQQ + +
Sbjct: 13 LKKNILKGIYSCGFEKPSTIQQKAIFPCISGKDVIVQAQSGTGKTATYAISVLQQIDTSN 72
Query: 113 GQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVG 172
+ AL+L TRELA Q + YL + K V GG +IK ++ LK Q+++G
Sbjct: 73 SNIQALILTPTRELALQAQRVLQTIGNYLYNFKCQVCIGGTSIKESQETLKK--AQVLIG 130
Query: 173 TPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRD-VQEIFKMTPHDKQVMMFSAT 231
TPGR++ L K + K ++ ++DE D+ML +D D +Q+IF+ QV++ SAT
Sbjct: 131 TPGRMIDLLTRKSIDTKAIKIVVIDEADEML--IDNFLDKIQDIFEFFESHVQVILLSAT 188
Query: 232 LSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQ 290
+ + + FM+DP++I V + A+LTL G+ Q+YI + + + K L DL D L Q
Sbjct: 189 VPSRVINTSQVFMRDPVKILVKN-AELTLEGIRQYYINVKKNDFKAETLFDLYDHLSLTQ 247
Query: 291 VVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGR 350
+IF + + L + L NF + IH MSQ+ER K F++G RIL++T+L+ R
Sbjct: 248 TLIFCNTRRQVDVLMECLTNRNFTASSIHGDMSQQERDFIMKEFRDGKTRILLSTNLLAR 307
Query: 351 GIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
GID++++++VINYD+P + + Y+HR+GR+GRFG KG+AI F++
Sbjct: 308 GIDVQQISLVINYDLPHNRENYIHRIGRSGRFGRKGIAINFIT 350
>gi|308487516|ref|XP_003105953.1| CRE-INF-1 protein [Caenorhabditis remanei]
gi|308254527|gb|EFO98479.1| CRE-INF-1 protein [Caenorhabditis remanei]
Length = 402
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 139/361 (38%), Positives = 212/361 (58%), Gaps = 6/361 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK ELLR I GFE PS +Q I G DVI QA+SG GKTA F +S LQ+
Sbjct: 31 FDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQR 90
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ V ALV+ TRELA QI YL ++ + GG +++ + L+N
Sbjct: 91 IDHEDPHVQALVMAPTRELAQQIQKVMSALGEYL-NVNILPCIGGTSVRDDQRKLENGI- 148
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
+VVGTPGR+ + L ++ F+LDE D+ML S + + ++F+ P D QV++
Sbjct: 149 HVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEML-SRGFKDQIYDVFRSMPQDVQVVL 207
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDAL 286
SAT+ E+ V +FM++P+ I V + +LTL G+ Q YI + + E K L DL + +
Sbjct: 208 LSATMPSEVLDVTDRFMRNPIRILVKKD-ELTLEGIRQFYINVQKDEWKFDCLCDLYNVV 266
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
+ Q VIF + + +L + + F C+H M Q ER T + F+ G+ R+L+ TD
Sbjct: 267 NVTQAVIFCNTRRKVDQLTEQMTNKQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTD 326
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
++ RGID+++V++VINYD+P + + Y+HR+GR+GRFG KG+AI FV+ +D+ L ++
Sbjct: 327 ILARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTE-NDARQLKEIET 385
Query: 407 F 407
+
Sbjct: 386 Y 386
>gi|253741975|gb|EES98832.1| Translation initiation factor eIF-4A, putative [Giardia
intestinalis ATCC 50581]
Length = 391
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 141/360 (39%), Positives = 206/360 (57%), Gaps = 5/360 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D L P+LL I G++ PS +Q + I I G D I QA+SG GKTA F + LQ+
Sbjct: 22 FDDMDLHPDLLFGIFSYGYKTPSAIQSQAIVPIISGKDTIAQAQSGTGKTAAFTIGMLQR 81
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ A++L TRELA Q E + L ++VA GG ++ D+ +
Sbjct: 82 IDIAMKSPQAIILSPTRELALQTLKVVEGIGSRL-QVEVAQCIGGT--QVDDDITAAQSC 138
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
++V TPGR+L+L + K ++ NV+ ILDE D+ML S + I K D Q+++
Sbjct: 139 HLIVATPGRLLSLLQKKYVTTSNVKMVILDEADEML-SRGFTEQIVSIMKFMNADIQIVL 197
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
SATL EI + ++FM+DP+ I V EA+LTL G+ Q+ ++L + K + D+ L
Sbjct: 198 VSATLPPEILELTRQFMRDPVSILVK-EAELTLDGIRQYVVELQDAWKTEVVEDIYKVLS 256
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
Q VIF S++R EL + L CIHS + Q ER F+ G RIL+AT++
Sbjct: 257 VQQGVIFCNSIARVKELAEKLKSAGHTISCIHSELDQAERNKIMGEFRSGQTRILIATNI 316
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
+ RGID++ V++VINYD+P A+TYLHR+GR+GRFG KG+AI FV+ + + KF
Sbjct: 317 IARGIDVQNVSLVINYDIPREAETYLHRIGRSGRFGRKGVAINFVTDKDKQSMQSITDKF 376
>gi|159468063|ref|XP_001692202.1| cytoplasmic DExD/H-box RNA helicase [Chlamydomonas reinhardtii]
gi|158278388|gb|EDP04152.1| cytoplasmic DExD/H-box RNA helicase [Chlamydomonas reinhardtii]
Length = 405
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 140/347 (40%), Positives = 206/347 (59%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D+ LK ELL I + GFE PS +Q E IP A+ G D++ +AK+G GKTA F + +++
Sbjct: 33 FEDYFLKRELLMGIFEKGFEKPSPIQEESIPIALAGRDILARAKNGTGKTAAFCIPVVER 92
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
+P + AL+L TRELA Q + S YL I+V V GG ++K D+++ +
Sbjct: 93 VDPTRPVIQALLLVPTRELALQTAQVCKELSKYL-SIEVMVTTGGTSLK--DDIMRLYQT 149
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
IVV TPGR++ LA L R ++DE DK+L S + + V+++ P D+Q+M
Sbjct: 150 THIVVATPGRVVDLASKGVARLNECRMLVMDEADKLL-SPEFQPVVEQLIGYLPDDRQIM 208
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
++SAT ++ +KF++ P I + +E LTL G+ Q Y + E +K LN L L
Sbjct: 209 LYSATFPVTVKAFKEKFLRKPYIINLMEE--LTLKGVTQFYAFVEEKQKVHCLNTLFSKL 266
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF SV+R L K + E + IH+ M Q R + F+ G+ R LV++D
Sbjct: 267 RINQSIIFCNSVNRVELLAKKITELGYSCYYIHAKMLQSHRNRVFHDFRNGHCRNLVSSD 326
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L RGIDI+ VN+VIN+D P +A+TYLHRVGR+GRFG GLA+ ++
Sbjct: 327 LFTRGIDIQSVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLIT 373
>gi|19113116|ref|NP_596324.1| ATP-dependent RNA helicase Ste13 [Schizosaccharomyces pombe 972h-]
gi|1174456|sp|Q09181.1|DHH1_SCHPO RecName: Full=Putative ATP-dependent RNA helicase ste13
gi|703066|dbj|BAA06178.1| RNA helicase [Schizosaccharomyces pombe]
gi|4176526|emb|CAA22882.1| ATP-dependent RNA helicase Ste13 [Schizosaccharomyces pombe]
Length = 485
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 137/349 (39%), Positives = 206/349 (59%), Gaps = 7/349 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D+ LK ELL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ +L++
Sbjct: 46 FEDYYLKRELLMGIFEAGFERPSPIQEESIPIALSGRDILARAKNGTGKTAAFVIPSLEK 105
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
+ ++ L+L TRELA Q + ++ ++KV V GG ++ D+++ N+
Sbjct: 106 VDTKKSKIQTLILVPTRELALQTSQVCKTLGKHM-NVKVMVTTGGTTLR--DDIIRLNDT 162
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
IVVGTPGR+L LA F++DE DK+L S + ++++ P ++Q+
Sbjct: 163 VHIVVGTPGRVLDLAGKGVADFSECTTFVMDEADKLL-SPEFTPIIEQLLSYFPKNRQIS 221
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
++SAT ++ K + P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 222 LYSATFPLIVKNFMDKHLNKPYEINLMDE--LTLRGVTQYYAFVDESQKVHCLNTLFSKL 279
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q R + F+ G R LV +D
Sbjct: 280 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMLQSHRNRVFHNFRNGVCRNLVCSD 339
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSA 395
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG +GLAI+F+S A
Sbjct: 340 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHRGLAISFISWA 388
>gi|71987143|ref|NP_001022623.1| Protein INF-1, isoform a [Caenorhabditis elegans]
gi|124217|sp|P27639.1|IF4A_CAEEL RecName: Full=Eukaryotic initiation factor 4A; Short=eIF-4A;
AltName: Full=ATP-dependent RNA helicase eIF4A; AltName:
Full=Initiation factor 1
gi|6700|emb|CAA78102.1| unnamed protein product [Caenorhabditis elegans]
gi|351062344|emb|CCD70313.1| Protein INF-1, isoform a [Caenorhabditis elegans]
Length = 402
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 140/361 (38%), Positives = 211/361 (58%), Gaps = 6/361 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK ELLR I GFE PS +Q I G DVI QA+SG GKTA F +S LQ+
Sbjct: 31 FDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQR 90
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ V ALV+ TRELA QI YL ++ + GG +++ + L+
Sbjct: 91 IDHEDPHVQALVMAPTRELAQQIQKVMSALGEYL-NVNILPCIGGTSVRDDQRKLEAGI- 148
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
+VVGTPGR+ + L ++ F+LDE D+ML S + + E+F+ P D QV++
Sbjct: 149 HVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEML-SRGFKDQIYEVFRSMPQDVQVVL 207
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDAL 286
SAT+ E+ V +FM++P+ I V + +LTL G+ Q YI + + E K L DL + +
Sbjct: 208 LSATMPSEVLDVTNRFMRNPIRILVKKD-ELTLEGIRQFYINVQKDEWKFDCLCDLYNVV 266
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
+ Q VIF + + L + + E F C+H M Q ER T + F+ G+ R+L+ TD
Sbjct: 267 NVTQAVIFCNTRRKVDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTD 326
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
++ RGID+++V++VINYD+P + + Y+HR+GR+GRFG KG+AI FV+ +D+ L ++
Sbjct: 327 ILARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTE-NDARQLKEIES 385
Query: 407 F 407
+
Sbjct: 386 Y 386
>gi|297814273|ref|XP_002875020.1| hypothetical protein ARALYDRAFT_490504 [Arabidopsis lyrata subsp.
lyrata]
gi|297320857|gb|EFH51279.1| hypothetical protein ARALYDRAFT_490504 [Arabidopsis lyrata subsp.
lyrata]
Length = 507
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 148/391 (37%), Positives = 221/391 (56%), Gaps = 20/391 (5%)
Query: 10 EDELLDYEEEDAQA------PDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVD 63
+ E++D ED +A PD+ + A K + F D+ LK ELL I +
Sbjct: 98 QSEVIDPNSEDWKARLKLPAPDTRYRTEDVTATK-------GNEFEDYFLKRELLMGIYE 150
Query: 64 SGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHT 123
GFE PS +Q E IP A+ G D++ +AK+G GKTA F + L++ + + + A+++ T
Sbjct: 151 KGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLEKIDQDNNVIQAVIIVPT 210
Query: 124 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALAR 182
RELA Q + +L I+V V GG ++K D+++ P ++VGTPGRIL LA+
Sbjct: 211 RELALQTSQVCKELGKHL-KIQVMVTTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLAK 267
Query: 183 DKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKK 242
LK+ ++DE DK+L S + + V+ + P ++Q++MFSAT ++ +
Sbjct: 268 KGVCVLKDCSVLVMDEADKLL-SQEFQPSVEHLISFLPENRQILMFSATFPVTVKDFKDR 326
Query: 243 FMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAA 302
F+ +P I + DE LTL G+ Q Y + E +K LN L L NQ +IF SV+R
Sbjct: 327 FLTNPYVINLMDE--LTLKGITQFYAFVEERQKIHCLNTLFSKLQINQSIIFCNSVNRVE 384
Query: 303 ELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVIN 362
L K + E + IH+ M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN
Sbjct: 385 LLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVIN 444
Query: 363 YDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
+D P +A+TYLHRVGR+GRFG GLA+ ++
Sbjct: 445 FDFPKNAETYLHRVGRSGRFGHLGLAVNLIT 475
>gi|406862020|gb|EKD15072.1| DEAD/DEAH box helicase [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 536
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 150/383 (39%), Positives = 214/383 (55%), Gaps = 8/383 (2%)
Query: 12 ELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 71
+L D ED + +V TK E F DF L +LL I ++GFE PS
Sbjct: 13 KLSDDASEDWKKGLTVPTKDTREQTAD-VTATKGLDFEDFNLDRKLLMGIFEAGFEKPSP 71
Query: 72 VQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 131
+Q E IP A+ G D++ +AK+G GKTA F++ LQ+ +V AL+L TRELA Q
Sbjct: 72 IQEEAIPIALAGRDILARAKNGTGKTAAFIIPALQKVSAKNNKVQALILVPTRELAMQTS 131
Query: 132 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKN 190
+ +L I V V GG ++ D+++ + P ++VGTPGRIL LA L
Sbjct: 132 QVCKTLGKHL-GINVMVTTGGTMLR--DDIVRLQEPVHVIVGTPGRILDLAGKGVADLSE 188
Query: 191 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 250
FI+DE DK+L S + ++++ + P ++QVM+FSAT ++ K M+DP EI
Sbjct: 189 CFTFIMDEADKLL-SPEFTPVIEQLLQFHPKERQVMLFSATFPITVKTFSDKNMKDPFEI 247
Query: 251 YVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 310
+ DE LTL G+ Q+Y + E +K LN L L NQ +IF S +R L K + E
Sbjct: 248 NLMDE--LTLRGITQYYAFVEESQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITE 305
Query: 311 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 370
+ H+ M Q R + F+ G R LV +DL+ RGIDI+ VN+VIN+D P +A+
Sbjct: 306 LGYSCFYSHARMMQTNRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAE 365
Query: 371 TYLHRVGRAGRFGTKGLAITFVS 393
TYLHR+GR+GRFG GLAI ++
Sbjct: 366 TYLHRIGRSGRFGHLGLAINLIN 388
>gi|367013342|ref|XP_003681171.1| hypothetical protein TDEL_0D03760 [Torulaspora delbrueckii]
gi|359748831|emb|CCE91960.1| hypothetical protein TDEL_0D03760 [Torulaspora delbrueckii]
Length = 398
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 141/362 (38%), Positives = 210/362 (58%), Gaps = 5/362 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F LK +LLR I GFE PS +Q I Q I G DVI QA+SG GKTA F + LQ
Sbjct: 25 FEAMKLKDDLLRGIYSYGFEAPSAIQSRAITQIISGKDVIAQAQSGTGKTATFTIGILQA 84
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
E + ALVL TRELA QI Y+ ++K GG +K ++
Sbjct: 85 IELKRKDLQALVLSPTRELATQISQVVSNLGDYM-NVKTYAITGGKTLKDDIKKIQGSGC 143
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKML-ESLDMRRDVQEIFKMTPHDKQVM 226
IV GTPGR+L + + + L ++V+ ILDE D++L E L + + +IF P QV+
Sbjct: 144 HIVSGTPGRVLDMIKRQILKTRSVQMLILDEADELLSERLGFKNQIYDIFTKLPPACQVV 203
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL-SELEKNRKLNDLLDA 285
+ SAT++K+I + KKFM DP++I V + +++L G+ Q+ + + E K L DL D+
Sbjct: 204 VVSATMNKDILEITKKFMSDPVKILVKKD-EISLEGIKQYMVNVDKEDWKFDTLCDLYDS 262
Query: 286 LDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVAT 345
L Q VIF + + L + + + NF +H M QE+R F+ G+ R+L++T
Sbjct: 263 LTITQCVIFCNTKKKVDWLAQKMSQSNFAVSSMHGDMKQEDRDRVMNDFRTGHSRVLIST 322
Query: 346 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVS 405
D+ RGID++++++VINYD+P+ + Y+HR+GR+GRFG KG+AI FV+ D L ++
Sbjct: 323 DVWARGIDVQQISLVINYDIPEILENYIHRIGRSGRFGRKGVAINFVTR-DDVSKLKEIE 381
Query: 406 KF 407
KF
Sbjct: 382 KF 383
>gi|406602119|emb|CCH46306.1| ATP-dependent RNA helicase [Wickerhamomyces ciferrii]
Length = 396
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 137/350 (39%), Positives = 210/350 (60%), Gaps = 5/350 (1%)
Query: 46 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTL 105
S F + LK +LL+ I GFE PS +Q I Q I G D I QA+SG GKTA F + L
Sbjct: 23 SSFEEMELKDDLLKGIYGYGFEAPSAIQSRAIMQIISGRDTIAQAQSGTGKTATFSIGML 82
Query: 106 QQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE 165
+ + + ALVL TRELA QI + + Y+ +++ GG N+ L ++
Sbjct: 83 EVIDSKNRETQALVLSPTRELAIQIQNVIKALGDYM-NVQCHACIGGTNVGSDIKAL-SK 140
Query: 166 CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQV 225
IV GTPGR+L + + ++L+ +NV+ ILDE D++L S + + +I++ P QV
Sbjct: 141 GQHIVSGTPGRVLDMIKRRNLNTRNVKMLILDEADELL-SKGFKEQIYDIYRQLPAGTQV 199
Query: 226 MMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL-SELEKNRKLNDLLD 284
++ SATL K++ + KF DP++I V + +LTL G+ Q++I + E K L DL D
Sbjct: 200 VVVSATLPKDVLEMTSKFTTDPVKILVKRD-ELTLEGIKQYFIAVEKEDWKFDTLCDLYD 258
Query: 285 ALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVA 344
+L Q VIF + + L+ + E NF + +H M Q+ER F+ GN R+L++
Sbjct: 259 SLTITQAVIFCNTKKKVDWLSDKMKESNFTVVAMHGDMKQDERDQIMNDFRLGNSRVLIS 318
Query: 345 TDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSS 394
TD+ RGID+++V++VINYD+P+ + Y+HR+GR+GRFG KG+AI FV++
Sbjct: 319 TDVWARGIDVQQVSLVINYDLPNDRENYIHRIGRSGRFGRKGVAINFVTN 368
>gi|336467195|gb|EGO55359.1| hypothetical protein NEUTE1DRAFT_46597 [Neurospora tetrasperma FGSC
2508]
gi|350288179|gb|EGZ69415.1| ATP-dependent RNA helicase dhh-1 [Neurospora tetrasperma FGSC 2509]
Length = 507
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 141/356 (39%), Positives = 206/356 (57%), Gaps = 7/356 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
+ DF+ +LL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ L +
Sbjct: 47 WEDFIHDRDLLMGIFEAGFEKPSPIQEEAIPVALTGRDILARAKNGTGKTAAFVIPALNK 106
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
P ++ L+L TRELA Q + +L I V V GG ++ D+++ + P
Sbjct: 107 INPKVSKIQCLILVPTRELAMQTSQVCKTLGKHL-GINVMVTTGGTGLR--DDIVRLQDP 163
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
IVVGTPGRIL LA + L FI+DE DK+L S + ++++ + P D+QVM
Sbjct: 164 VHIVVGTPGRILDLAGKQVADLSECPMFIMDEADKLL-SQEFTPVIEQLLQFHPKDRQVM 222
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K M P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 223 LFSATFPLSVKDFSDKNMTSPYEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFSKL 280
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M+Q+ R + F+ G R LV +D
Sbjct: 281 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMAQQARNRVFHDFRNGVCRNLVCSD 340
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILN 402
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GR+G GLAI ++ ++ N
Sbjct: 341 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLINWDDRFNLYN 396
>gi|213407104|ref|XP_002174323.1| ATP-dependent RNA helicase dhh1 [Schizosaccharomyces japonicus
yFS275]
gi|212002370|gb|EEB08030.1| ATP-dependent RNA helicase dhh1 [Schizosaccharomyces japonicus
yFS275]
Length = 498
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 136/347 (39%), Positives = 205/347 (59%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D+ LK ELL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ +L++
Sbjct: 47 FEDYYLKRELLMGIFEAGFERPSPIQEESIPIALAGRDILARAKNGTGKTAAFVIPSLEK 106
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
+ ++ L+L TRELA Q + ++ ++ V V GG ++ D+++ NE
Sbjct: 107 VDTKKSKIQTLILVPTRELALQTSQVCKTLGKHM-NVNVMVTTGGTTLR--DDIIRLNEP 163
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
IVVGTPGR+L LA +F++DE DK+L S + ++++ P ++Q+
Sbjct: 164 VHIVVGTPGRVLDLAGKGVADFSECSNFVMDEADKLL-SPEFTPIIEQLLTHFPKNRQIS 222
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
++SAT ++ K + P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 223 LYSATFPLLVKSFMDKHLNKPYEINLMDE--LTLRGVTQYYAFVDERQKVHCLNTLFSKL 280
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q R + F+ G R LV +D
Sbjct: 281 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMLQSHRNRVFHNFRNGVCRNLVCSD 340
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG +GLAI+F+S
Sbjct: 341 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHRGLAISFIS 387
>gi|440640348|gb|ELR10267.1| ATP-dependent RNA helicase DDX6/DHH1 [Geomyces destructans
20631-21]
Length = 536
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 140/347 (40%), Positives = 202/347 (58%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F +F +K +LL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ L++
Sbjct: 49 FEEFSIKRDLLMGIFEAGFEKPSPIQEEAIPVALTGRDILARAKNGTGKTAAFVIPALER 108
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
P ++ L+L TRELA Q + +L + V V GG ++ D+++ P
Sbjct: 109 INPKSSKIQCLILVPTRELALQTSQVCKTLGKHL-GVNVMVTTGGTGLR--DDIVRLAEP 165
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
IVVGTPGRIL LA L FI+DE DK+L S + ++++ + P D+Q+M
Sbjct: 166 VHIVVGTPGRILDLAGKSVADLSECPMFIMDEADKLL-SPEFTPVIEQLLQFHPKDRQIM 224
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT + ++ K M P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 225 LFSATFPRSVQAFSVKNMDQPYEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFSKL 282
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q R + F+ G R LV +D
Sbjct: 283 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHARMLQANRNRVFHDFRNGVCRNLVCSD 342
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 343 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLIN 389
>gi|354546450|emb|CCE43180.1| hypothetical protein CPAR2_208250 [Candida parapsilosis]
Length = 427
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 139/348 (39%), Positives = 204/348 (58%), Gaps = 7/348 (2%)
Query: 47 GFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQ 106
F DF LK ELL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA F++ LQ
Sbjct: 32 SFEDFNLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDILARAKNGTGKTASFIIPCLQ 91
Query: 107 QTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NE 165
+P ++ AL+L TRELA Q +L ++ V GG +++ D+++ N+
Sbjct: 92 LCKPKLNKIQALILVPTRELALQTSQVVRTLGKHL-GVQCMVTTGGTSLR--DDIVRLND 148
Query: 166 CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQV 225
I+VGTPGR+L LA K L F++DE DKML S + + +++I + P +Q
Sbjct: 149 PVHILVGTPGRVLDLASRKVADLSECPLFVMDEADKML-SREFKNIIEQILEFFPPHRQA 207
Query: 226 MMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDA 285
++FSAT ++ + + P E+ + DE LTL G+ Q Y + E +K LN L
Sbjct: 208 LLFSATFPITVKHFMDQHLNKPYEVNLMDE--LTLKGITQFYAFVEEKQKLHCLNTLFSK 265
Query: 286 LDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVAT 345
L NQ +IF S +R L K + E + H+ M Q+ R + F++G R LV +
Sbjct: 266 LQINQSIIFCNSTNRVELLAKKITELGYSCYYSHAKMPQQARNKVFHEFRQGKVRNLVCS 325
Query: 346 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
DL+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI +S
Sbjct: 326 DLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLMS 373
>gi|68474158|ref|XP_718788.1| hypothetical protein CaO19.6197 [Candida albicans SC5314]
gi|68474329|ref|XP_718704.1| hypothetical protein CaO19.13577 [Candida albicans SC5314]
gi|74656470|sp|Q5AAW3.1|DHH1_CANAL RecName: Full=ATP-dependent RNA helicase DHH1
gi|46440487|gb|EAK99792.1| hypothetical protein CaO19.13577 [Candida albicans SC5314]
gi|46440576|gb|EAK99880.1| hypothetical protein CaO19.6197 [Candida albicans SC5314]
Length = 549
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 141/347 (40%), Positives = 204/347 (58%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F DF LK ELL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA F++ LQ
Sbjct: 32 FEDFNLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDILARAKNGTGKTASFIIPCLQL 91
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P +V AL+L TRELA Q ++ + V GG +++ D+++ P
Sbjct: 92 VKPKLNKVQALILVPTRELALQTSQVVRTLGKHV-GTQCMVTTGGTSLR--DDIVRLHDP 148
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
I+VGTPGR+L LA K + L F++DE DKML S + + +++I + P ++Q +
Sbjct: 149 VHILVGTPGRVLDLAARKVVDLSECPLFVMDEADKML-SREFKGIIEQILEFFPPNRQAL 207
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K + P EI + DE LTL G+ Q Y + E +K LN L L
Sbjct: 208 LFSATFPLAVKSFMDKHLTKPYEINLMDE--LTLKGISQFYAFVEEKQKLHCLNTLFSKL 265
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q+ R + F++G R LV +D
Sbjct: 266 QINQSIIFCNSTNRVELLAKKITELGYSCYYSHAKMPQQARNKVFHEFRQGKVRNLVCSD 325
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI +S
Sbjct: 326 LLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLMS 372
>gi|164425692|ref|XP_960011.2| hypothetical protein NCU06149 [Neurospora crassa OR74A]
gi|161789041|sp|Q7S5D9.2|DHH1_NEUCR RecName: Full=ATP-dependent RNA helicase dhh-1
gi|157071024|gb|EAA30775.2| hypothetical protein NCU06149 [Neurospora crassa OR74A]
Length = 505
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 141/356 (39%), Positives = 206/356 (57%), Gaps = 7/356 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
+ DF+ +LL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ L +
Sbjct: 47 WEDFIHDRDLLMGIFEAGFEKPSPIQEEAIPVALTGRDILARAKNGTGKTAAFVIPALNK 106
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
P ++ L+L TRELA Q + +L I V V GG ++ D+++ + P
Sbjct: 107 INPKVSKIQCLILVPTRELAMQTSQVCKTLGKHL-GINVMVTTGGTGLR--DDIVRLQDP 163
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
IVVGTPGRIL LA + L FI+DE DK+L S + ++++ + P D+QVM
Sbjct: 164 VHIVVGTPGRILDLAGKQVADLSECPMFIMDEADKLL-SQEFTPVIEQLLQFHPKDRQVM 222
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K M P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 223 LFSATFPLSVKDFSDKNMTSPYEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFSKL 280
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M+Q+ R + F+ G R LV +D
Sbjct: 281 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMAQQARNRVFHDFRNGVCRNLVCSD 340
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILN 402
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GR+G GLAI ++ ++ N
Sbjct: 341 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLINWDDRFNLYN 396
>gi|324506599|gb|ADY42814.1| Eukaryotic initiation factor 4A [Ascaris suum]
gi|324507947|gb|ADY43360.1| Eukaryotic initiation factor 4A [Ascaris suum]
Length = 415
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 141/362 (38%), Positives = 209/362 (57%), Gaps = 6/362 (1%)
Query: 47 GFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQ 106
F D LK +LLR + GFE PS +Q I + DVI QA+SG GKTA F +S LQ
Sbjct: 43 SFDDMNLKEDLLRGVYAFGFEKPSAIQQRAIVPCCMKRDVIAQAQSGTGKTATFSVSVLQ 102
Query: 107 QTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNEC 166
+ + +V ALV+ TRELA QI Y+ +K GG N++ + L++
Sbjct: 103 NIDESIPEVQALVMAPTRELAQQIQKVMVSLGEYM-GVKCHACIGGTNVRDDQRKLESGV 161
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
IVVGTPGR+ + + + L ++ F+LDE D+ML S + + E+FK P+D QV+
Sbjct: 162 -HIVVGTPGRVNDMIQRQSLQTSAIKMFVLDEADEML-SRGFKDQIYEVFKCMPNDVQVV 219
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDA 285
+ SAT+ E+ V +FM DP+ I V E +LTL G+ Q YI + + E K L DL
Sbjct: 220 LLSATMPAEVLEVTNRFMNDPVRILVKKE-ELTLEGIRQFYIDVEKEEWKFETLCDLYQT 278
Query: 286 LDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVAT 345
++ Q VIF + + L + + + C+H M Q ER + F+ G+ R+L+ T
Sbjct: 279 VNVTQAVIFCNTRRKVDYLANQMTKEKYTVSCMHGDMEQSERDLIMREFRSGSSRVLITT 338
Query: 346 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVS 405
DL+ RGID+++V++VINYD+P + + Y+HR+GR+GRFG KG+AI FV+ D+ L +
Sbjct: 339 DLLARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTE-QDTRQLKDIE 397
Query: 406 KF 407
F
Sbjct: 398 SF 399
>gi|241949195|ref|XP_002417320.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
gi|223640658|emb|CAX44953.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
Length = 543
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 141/347 (40%), Positives = 204/347 (58%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F DF LK ELL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA F++ LQ
Sbjct: 32 FEDFNLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDILARAKNGTGKTASFIIPCLQL 91
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P +V AL+L TRELA Q ++ + V GG +++ D+++ P
Sbjct: 92 VKPKLNKVQALILVPTRELALQTSQVVRTLGKHV-GTQCMVTTGGTSLR--DDIVRLHDP 148
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
I+VGTPGR+L LA K + L F++DE DKML S + + +++I + P ++Q +
Sbjct: 149 VHILVGTPGRVLDLAARKVVDLSECPLFVMDEADKML-SREFKGIIEQILEFFPPNRQAL 207
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K + P EI + DE LTL G+ Q Y + E +K LN L L
Sbjct: 208 LFSATFPLAVKSFMDKHLTKPYEINLMDE--LTLKGISQFYAFVEEKQKLHCLNTLFSKL 265
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q+ R + F++G R LV +D
Sbjct: 266 QINQSIIFCNSTNRVELLAKKITELGYSCYYSHAKMPQQARNKVFHEFRQGKVRNLVCSD 325
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI +S
Sbjct: 326 LLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLMS 372
>gi|323338408|gb|EGA79633.1| Dhh1p [Saccharomyces cerevisiae Vin13]
Length = 448
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 137/335 (40%), Positives = 197/335 (58%), Gaps = 7/335 (2%)
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
I ++GFE PS +Q E IP AI G D++ +AK+G GKTA FV+ TL++ +P ++ AL+
Sbjct: 2 GIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALI 61
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRIL 178
+ TRELA Q + I V GG N++ D+L+ NE I+VGTPGR+L
Sbjct: 62 MVPTRELALQTSQVVRTLGKHC-GISCMVTTGGTNLR--DDILRLNETVHILVGTPGRVL 118
Query: 179 ALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRP 238
LA K L + FI+DE DKML S D + +++I P Q ++FSAT ++
Sbjct: 119 DLASRKVADLSDCSLFIMDEADKML-SRDFKTIIEQILSFLPXTHQSLLFSATFPLTVKE 177
Query: 239 VCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSV 298
K + P EI + +E LTL G+ Q+Y + E +K LN L L NQ +IF S
Sbjct: 178 FMVKHLHKPYEINLMEE--LTLKGITQYYAFVEERQKLHCLNTLFSKLQINQAIIFCNST 235
Query: 299 SRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVN 358
+R L K + + + H+ M Q+ER + F++G R LV +DL+ RGIDI+ VN
Sbjct: 236 NRVELLAKKITDLGYSCYYSHARMKQQERNKVFHEFRQGKVRTLVCSDLLTRGIDIQAVN 295
Query: 359 IVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 296 VVINFDFPKTAETYLHRIGRSGRFGHLGLAINLIN 330
>gi|226496647|ref|NP_001140760.1| uncharacterized protein LOC100272835 [Zea mays]
gi|194700960|gb|ACF84564.1| unknown [Zea mays]
gi|195623902|gb|ACG33781.1| ATP-dependent RNA helicase dhh1 [Zea mays]
gi|413933898|gb|AFW68449.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 499
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 138/347 (39%), Positives = 202/347 (58%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D+ LK ELL I + GFE PS +Q E IP A+ G D++ +AK+G GKTA F + L++
Sbjct: 127 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 186
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P + ++L TRELA Q + YL +I+V V GG ++K D+++ P
Sbjct: 187 IDPEKNAIQVVILVPTRELALQTSQVCKELGKYL-NIQVMVSTGGTSLK--DDIMRLYQP 243
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
++VGTPGRIL L R LK+ ++DE DK+L + + V+ + P +Q++
Sbjct: 244 VHLLVGTPGRILDLTRKGICVLKDCSMLVMDEADKLLAP-EFQPSVEALIHFLPPSRQLL 302
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
MFSAT ++ K++ P I + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 303 MFSATFPVTVKEFKDKYLPRPYVINLMDE--LTLKGITQYYAFVEERQKVHCLNTLFSKL 360
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF SV+R L K + E + IH+ M Q+ R + F+ G R LV TD
Sbjct: 361 QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTD 420
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L RGIDI+ VN+VIN+D P +++TYLHRVGR+GR+G GLA+ ++
Sbjct: 421 LFTRGIDIQAVNVVINFDFPKTSETYLHRVGRSGRYGHLGLAVNLIT 467
>gi|226532852|ref|NP_001150170.1| ATP-dependent RNA helicase dhh1 [Zea mays]
gi|195637296|gb|ACG38116.1| ATP-dependent RNA helicase dhh1 [Zea mays]
gi|414870829|tpg|DAA49386.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 503
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 138/347 (39%), Positives = 204/347 (58%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D+ LK ELL I + GFE PS +Q E IP A+ G D++ +AK+G GKTA F + L++
Sbjct: 131 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 190
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P + ++L TRELA Q + YL +I+V V GG ++K D+++ P
Sbjct: 191 IDPENNAIQVVILVPTRELALQTSQVCKELGKYL-NIEVMVSTGGTSLK--DDIMRLYQP 247
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
++VGTPGRIL L R LK+ ++DE DK+L + + + V+ + P +Q++
Sbjct: 248 VHLLVGTPGRILDLTRKGICVLKDCSMLVMDEADKLL-APEFQPSVEALIHFLPPSRQLL 306
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
MFSAT ++ +K++ P I + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 307 MFSATFPVTVKEFKEKYLPRPYVINLMDE--LTLKGITQYYAFVEERQKVHCLNTLFSKL 364
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF SV+R L K + E + IH+ M Q+ R + F+ G R LV TD
Sbjct: 365 QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTD 424
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L RGIDI+ VN+VIN+D P +++TYLHRVGR+GR+G GLA+ ++
Sbjct: 425 LFTRGIDIQAVNVVINFDFPKTSETYLHRVGRSGRYGHLGLAVNLIT 471
>gi|346976089|gb|EGY19541.1| ATP-dependent RNA helicase DHH1 [Verticillium dahliae VdLs.17]
Length = 492
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 140/348 (40%), Positives = 204/348 (58%), Gaps = 7/348 (2%)
Query: 56 ELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQV 115
+LL I ++GFE PS +Q E IP A+ G DV+ +AK+G GKTA FV+ L++ P ++
Sbjct: 16 DLLMGIFEAGFEKPSPIQEEAIPVALTGRDVLARAKNGTGKTAAFVIPALEKINPKVSKI 75
Query: 116 TALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTP 174
L+L TRELA Q + +L I V V GG ++ D+++ + P IVVGTP
Sbjct: 76 QCLILVPTRELAMQTSQVCKTLGKHL-GINVMVTTGGTGLR--DDIVRLQDPVHIVVGTP 132
Query: 175 GRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSK 234
GRIL LA L FI+DE DK+L S++ ++++ + P D+QVM+FSAT
Sbjct: 133 GRILDLAGKTVADLSECPMFIMDEADKLL-SIEFTPVIEQLLQFHPKDRQVMLFSATFPL 191
Query: 235 EIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIF 294
++ K M +P EI + DE LTL G+ Q+Y + E +K LN L L NQ +IF
Sbjct: 192 SVKDFSDKNMANPYEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFSKLQINQSIIF 249
Query: 295 VKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDI 354
S +R L K + E + H+ M+Q+ R + F+ G R LV +DL+ RGIDI
Sbjct: 250 CNSTNRVELLAKKITELGYSCFYSHAKMAQQARNRVFHDFRNGVCRNLVCSDLLTRGIDI 309
Query: 355 ERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILN 402
+ VN+VIN+D P +A+TYLHR+GR+GR+G GLAI ++ ++ N
Sbjct: 310 QAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLINWEDRFNLYN 357
>gi|242034035|ref|XP_002464412.1| hypothetical protein SORBIDRAFT_01g017760 [Sorghum bicolor]
gi|241918266|gb|EER91410.1| hypothetical protein SORBIDRAFT_01g017760 [Sorghum bicolor]
Length = 507
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 143/372 (38%), Positives = 211/372 (56%), Gaps = 14/372 (3%)
Query: 23 APDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAIL 82
APD+ + A K + F D+ LK ELL I + GFE PS +Q E IP A+
Sbjct: 117 APDTRYRTEDVTATK-------GNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALT 169
Query: 83 GMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLP 142
G D++ +AK+G GKTA F + L++ +P + ++L TRELA Q + YL
Sbjct: 170 GSDILARAKNGTGKTAAFCIPALEKIDPEKTAIQVVILVPTRELALQTSQVCKELGKYL- 228
Query: 143 DIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKNVRHFILDECDK 201
+I+V V GG ++K D+++ P ++VGTPGRIL L R LK+ ++DE DK
Sbjct: 229 NIQVMVSTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLTRKGICVLKDCSMLVMDEADK 286
Query: 202 MLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH 261
+L + + V+ + P +Q++MFSAT ++ +K++ P I + DE LTL
Sbjct: 287 LLAP-EFQPSVEALIHFLPPSRQLLMFSATFPVTVKEFKEKYLPRPYVINLMDE--LTLK 343
Query: 262 GLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSG 321
G+ Q+Y + E +K LN L L NQ +IF SV+R L K + E + IH+
Sbjct: 344 GITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAK 403
Query: 322 MSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 381
M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+D P +++TYLHRVGR+GR
Sbjct: 404 MLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKTSETYLHRVGRSGR 463
Query: 382 FGTKGLAITFVS 393
+G GLA+ ++
Sbjct: 464 YGHLGLAVNLIT 475
>gi|342184090|emb|CCC93571.1| putative ATP-dependent DEAD-box RNA helicase [Trypanosoma
congolense IL3000]
Length = 406
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 134/347 (38%), Positives = 209/347 (60%), Gaps = 6/347 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F ++ L+ EL I + GFE PS VQ E IP A+ G DV+ +AK+G GKTA FV+ L++
Sbjct: 33 FEEYGLRRELQMGIFEKGFERPSPVQEEAIPVALQGKDVLARAKNGTGKTASFVIPVLEK 92
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ + + AL++ TRELA Q + ++P ++V V GG ++ D+L+ + P
Sbjct: 93 IDTSLPHIQALLMVPTRELALQTAQVTKELGKHIPGLEVMVTTGGTTLR--DDILRLQSP 150
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
++V TPGR + LA L + R +LDE DK+L S + +++++ P ++Q +
Sbjct: 151 VHVLVATPGRAVDLASKGTAKLDSCRIIVLDEADKLL-SQEFTILMKDLYSFLPKNRQSL 209
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ ++++P E+ + +E LTL G+ Q+Y + E +K LN L + L
Sbjct: 210 LFSATFPVTVKDFADNYLRNPYEVNLMEE--LTLRGVTQYYAFVEERQKIHCLNTLFNRL 267
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF SV+R L K + + + IH+ M Q+ R + F+EG+ R LV +D
Sbjct: 268 QINQSIIFCNSVNRVELLAKKITQLGYSCYYIHARMQQQHRNRVFHDFREGHCRNLVCSD 327
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P A+TYLHR+GR+GRFG GLAI FV+
Sbjct: 328 LITRGIDIQAVNVVINFDFPKYAETYLHRIGRSGRFGHLGLAINFVT 374
>gi|320583801|gb|EFW98014.1| eukaryotic translation initiation factor eIF-4A subunit, putative
[Ogataea parapolymorpha DL-1]
Length = 396
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 144/366 (39%), Positives = 213/366 (58%), Gaps = 6/366 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F + LK LL+ I GFE PS +Q I Q I G DVI QA+SG GKTA F + LQ
Sbjct: 25 FEEMSLKESLLKGIYAYGFEAPSAIQSRAIAQVIQGRDVIAQAQSGTGKTATFTIGMLQV 84
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ + + ALVL TRELA QI Y+ I+ GG ++ L ++
Sbjct: 85 VDTSKFETQALVLSTTRELAAQIRSVISALGDYMK-IRCHACVGGKSVGEDIRAL-SKGQ 142
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
IV GTPGR+L + + + LS++NV+ +LDE D++L + + EI++ P QV++
Sbjct: 143 HIVSGTPGRVLDMIKRRTLSIRNVKMLVLDEADELLGK-GFQDQISEIYQYLPPSTQVVV 201
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL-SELEKNRKLNDLLDAL 286
SATL K + + KFM DP++I V + +LTL G+ Q+YI++ E K L DL D+L
Sbjct: 202 VSATLPKAVLSLTNKFMSDPVKILVKRD-ELTLEGINQYYIQVEKEDWKFDTLCDLYDSL 260
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
Q VIF + + L++ L + NF +H M Q+ER F+ GN R+L++TD
Sbjct: 261 TITQAVIFCNTKKKVDWLSESLRKANFTVSSMHGDMQQDERDRVMDEFRLGNSRVLISTD 320
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
+ RGID+++V++VINYD+P + Y+HR+GR+GRFG KG+AI FV+ D L ++ +
Sbjct: 321 IWARGIDVQQVSLVINYDLPYDKENYVHRIGRSGRFGRKGVAINFVTRNELGD-LTEIEE 379
Query: 407 FMFLLI 412
F + I
Sbjct: 380 FFSIKI 385
>gi|403217055|emb|CCK71550.1| hypothetical protein KNAG_0H01370 [Kazachstania naganishii CBS
8797]
Length = 398
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 145/363 (39%), Positives = 206/363 (56%), Gaps = 4/363 (1%)
Query: 47 GFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQ 106
F L +LL+ I GFE PS +Q I Q I G DVI QA+SG GKTA F + LQ
Sbjct: 22 AFESMGLDRKLLQGIYAYGFEAPSAIQSRAITQIISGKDVIAQAQSGTGKTATFTIGMLQ 81
Query: 107 QTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNEC 166
+ L+L TRELA QI ++L VA+ G K L+N
Sbjct: 82 ACSFGQNDLQCLILSPTRELAGQINSVVGNLGSFLNVKSVALVGGNKMAKQDSQKLQNGQ 141
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML-ESLDMRRDVQEIFKMTPHDKQV 225
+V GTPGR+L L + L +K + +LDE D++L ESL ++ + +IF P + QV
Sbjct: 142 VHVVSGTPGRVLDLIKRHVLVVKKCKMLVLDEADELLGESLGFKQQIYDIFTKLPKNCQV 201
Query: 226 MMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL-SELEKNRKLNDLLD 284
++ SAT+SK+I V KKFM P++I V E +++L + Q+Y+ + E K L DL D
Sbjct: 202 VVVSATMSKDIIEVTKKFMTTPVKILVKQE-EISLEKIKQYYVDVDKEDWKFDTLCDLYD 260
Query: 285 ALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVA 344
+L Q VIF + + L L + NF +H M QEER F+ G R+L++
Sbjct: 261 SLTITQCVIFCNTKRKVDWLAIKLTQSNFSVASMHGDMKQEERDKVMSDFRSGKSRVLIS 320
Query: 345 TDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
TD+ RGID+++V++V+NYD+PD + Y+HR+GR+GRFG KG+AI FV+ A D L Q+
Sbjct: 321 TDVWARGIDVQQVSLVVNYDLPDIMENYIHRIGRSGRFGRKGIAINFVTKA-DLSHLKQI 379
Query: 405 SKF 407
KF
Sbjct: 380 EKF 382
>gi|340500339|gb|EGR27226.1| hypothetical protein IMG5_199670 [Ichthyophthirius multifiliis]
Length = 410
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 146/397 (36%), Positives = 219/397 (55%), Gaps = 13/397 (3%)
Query: 14 LDYEEED--AQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 71
+D E+++ Q P + + + + F D+ LK +LL IV+ G++ PS
Sbjct: 1 MDEEQKNNQTQKPIQKSIQYDPRPKTTDVTATKGTDFEDYGLKEQLLMGIVEKGYDKPSP 60
Query: 72 VQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 131
+Q E IP ++ G ++I +AK+G GKTA FV+ L+Q + + AL+L TRELA Q+
Sbjct: 61 IQEETIPISLTGANIIARAKNGTGKTAAFVIPILEQIDNQKNHIQALILVPTRELALQVS 120
Query: 132 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQ----IVVGTPGRILALARDKDLS 187
+ YL I V GG K +D+L+ + Q ++V TPGR+L LA+
Sbjct: 121 SIVKELGKYL-QINCMVSTGGTQFK--EDVLRLQNMQCRVHVIVATPGRVLDLAKKNIAD 177
Query: 188 LKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDP 247
LDE DK+L S+D ++EI P ++Q+M+FSAT ++ K M D
Sbjct: 178 FSKCGILTLDEADKLL-SVDFMPIIEEILDFFPKERQIMLFSATFPISVKAFKDKHMPDC 236
Query: 248 MEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKL 307
+ + DE LTL G+ Q+Y L E +K + LN L L NQ +IF S R L K
Sbjct: 237 KSVNLMDE--LTLKGVTQYYAYLEEKQKVQCLNHLSAKLQINQAIIFCNSTKRVQLLAKK 294
Query: 308 LVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPD 367
+ E + IH+ M Q ER + F++G R LV++DL RGID++ VN+VIN+D P
Sbjct: 295 ITEQGYSCFYIHAKMEQSERNKVFHNFRKGEGRFLVSSDLFTRGIDVQSVNVVINFDFPK 354
Query: 368 SADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
+++TYLHR+GR+GR+G GLAI F++ D D L +V
Sbjct: 355 NSETYLHRIGRSGRYGHLGLAINFITD-DDKDNLIKV 390
>gi|242034037|ref|XP_002464413.1| hypothetical protein SORBIDRAFT_01g017770 [Sorghum bicolor]
gi|241918267|gb|EER91411.1| hypothetical protein SORBIDRAFT_01g017770 [Sorghum bicolor]
Length = 507
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 138/347 (39%), Positives = 203/347 (58%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D+ LK ELL I + GFE PS +Q E IP A+ G D++ +AK+G GKTA F + L++
Sbjct: 135 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 194
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P + ++L TRELA Q + YL +I+V V GG ++K D+++ P
Sbjct: 195 IDPEKTAIQVVILVPTRELALQTSQVCKELGKYL-NIQVMVSTGGTSLK--DDIMRLYQP 251
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
++VGTPGRIL L R LK+ ++DE DK+L + + V+ + P +Q++
Sbjct: 252 VHLLVGTPGRILDLTRKGICVLKDCSMLVMDEADKLLAP-EFQPSVEALIHFLPPSRQLL 310
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
MFSAT ++ +K++ P I + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 311 MFSATFPVTVKEFKEKYLPRPYVINLMDE--LTLKGITQYYAFVEERQKVHCLNTLFSKL 368
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF SV+R L K + E + IH+ M Q+ R + F+ G R LV TD
Sbjct: 369 QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTD 428
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L RGIDI+ VN+VIN+D P +++TYLHRVGR+GR+G GLA+ ++
Sbjct: 429 LFTRGIDIQAVNVVINFDFPKTSETYLHRVGRSGRYGHLGLAVNLIT 475
>gi|336259825|ref|XP_003344711.1| hypothetical protein SMAC_06365 [Sordaria macrospora k-hell]
gi|380088867|emb|CCC13147.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 584
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 139/347 (40%), Positives = 204/347 (58%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
+ DF+ +LL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA F++ L++
Sbjct: 47 WEDFIHDRDLLMGIFEAGFEKPSPIQEEAIPVALTGRDILARAKNGTGKTAAFLIPALEK 106
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
P ++ L+L TRELA Q + +L I V V GG ++ D+++ + P
Sbjct: 107 INPKVSKIQCLILVPTRELAMQTSQVCKTLGKHL-GINVMVTTGGTGLR--DDIVRLQDP 163
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
IVVGTPGRIL LA + L FI+DE DK+L S + ++++ + P D+QVM
Sbjct: 164 VHIVVGTPGRILDLAGKQVADLSECPMFIMDEADKLL-SQEFTPVIEQLLQFHPKDRQVM 222
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K M P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 223 LFSATFPLSVKDFSDKNMTSPYEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFSKL 280
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M+Q+ R + F+ G R LV +D
Sbjct: 281 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMAQQARNRVFHDFRNGVCRNLVCSD 340
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GR+G GLAI ++
Sbjct: 341 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLIN 387
>gi|302415451|ref|XP_003005557.1| ATP-dependent RNA helicase dhh-1 [Verticillium albo-atrum VaMs.102]
gi|261354973|gb|EEY17401.1| ATP-dependent RNA helicase dhh-1 [Verticillium albo-atrum VaMs.102]
Length = 390
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 139/337 (41%), Positives = 200/337 (59%), Gaps = 7/337 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F +F LK +LL I ++GFE PS +Q E IP A+ G DV+ +AK+G GKTA FV+ L++
Sbjct: 48 FENFQLKRDLLMGIFEAGFEKPSPIQEEAIPVALTGRDVLARAKNGTGKTAAFVIPALEK 107
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
P ++ L+L TRELA Q + +L I V V GG ++ D+++ + P
Sbjct: 108 INPKVSKIQCLILVPTRELAMQTSQVCKTLGKHL-GINVMVTTGGTGLR--DDIIRLQDP 164
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
IVVGTPGRIL LA L FI+DE DK+L S++ ++++ + P D+QVM
Sbjct: 165 VHIVVGTPGRILDLAGKTVADLSECPMFIMDEADKLL-SIEFTPVIEQLLQFHPKDRQVM 223
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K M +P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 224 LFSATFPLSVKDFSDKNMANPYEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFSKL 281
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M+Q+ R + F+ G R LV +D
Sbjct: 282 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMAQQARNRVFHDFRNGVCRNLVCSD 341
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 383
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GR+G
Sbjct: 342 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYG 378
>gi|312069559|ref|XP_003137738.1| hypothetical protein LOAG_02152 [Loa loa]
gi|307767094|gb|EFO26328.1| eukaryotic initiation factor 4A [Loa loa]
Length = 415
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 149/406 (36%), Positives = 222/406 (54%), Gaps = 10/406 (2%)
Query: 4 TRDNEYEDELLDYEEEDAQAPDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIV 62
T N+ + + D E A AP ++G YV F + LK LLR I
Sbjct: 2 TDANQQQKHVNDGEVAGAPAPTQAPLDSDGLIESNWEYV---CENFDEMGLKENLLRGIY 58
Query: 63 DSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCH 122
GFE PS +Q I DVI QA+SG GKTA F ++ LQ + +V ALV+
Sbjct: 59 AFGFEKPSAIQQRAIIPCTKKRDVIAQAQSGTGKTATFSVAVLQNIDETIPEVQALVMAP 118
Query: 123 TRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALAR 182
TRELA QI YL +K GG N++ + L++ +VVGTPGR+ +
Sbjct: 119 TRELAQQIQKVMLSLGEYL-GVKCHASIGGTNVRDDQRKLESGV-HVVVGTPGRVNDMIT 176
Query: 183 DKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKK 242
+ L N++ F+LDE D+ML S + + ++FK P+D QV++ SAT+ E+ V +
Sbjct: 177 RQSLQTNNIKMFVLDEADEML-SRGFKEQIYDVFKCMPNDVQVVLLSATMPSEVLEVTNR 235
Query: 243 FMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRA 301
FM DP+ I V E +LTL G+ Q YI + + E K L DL ++ Q VIF + +
Sbjct: 236 FMNDPIRILVKRE-ELTLEGIRQFYINVEKEEWKFETLCDLYSTVNVTQAVIFCNTRRKV 294
Query: 302 AELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVI 361
L + + + C+H M Q ER + F+ G+ R+L+ TDL+ RGID+++V++VI
Sbjct: 295 DYLATQMSKEKYTVSCMHGEMEQSERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVI 354
Query: 362 NYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
NYD+P + + Y+HR+GR+GRFG KG+AI F++ A D ++ + F
Sbjct: 355 NYDLPSNRENYIHRIGRSGRFGRKGVAINFITEA-DMRMMKDIESF 399
>gi|297610744|ref|NP_001065000.2| Os10g0503700 [Oryza sativa Japonica Group]
gi|255679537|dbj|BAF26914.2| Os10g0503700 [Oryza sativa Japonica Group]
Length = 521
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 146/389 (37%), Positives = 218/389 (56%), Gaps = 20/389 (5%)
Query: 12 ELLDYEEEDAQA------PDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSG 65
E +D ED +A PD+ + A K + F D+ LK ELL I + G
Sbjct: 114 EAVDSSSEDWKAQLNLPAPDTRYRTEDVTATK-------GNEFEDYFLKRELLMGIYEKG 166
Query: 66 FEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRE 125
FE PS +Q E IP A+ G D++ +AK+G GKTA F + L++ +P + ++L TRE
Sbjct: 167 FERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDPEKNAIQVVILVPTRE 226
Query: 126 LAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDK 184
LA Q + YL +I+V V GG ++K D+++ P ++VGTPGRIL L R
Sbjct: 227 LALQTSQVCKELGKYL-NIQVMVSTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLTRKG 283
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 244
LK+ ++DE DK+L + + ++++ P ++Q++MFSAT ++ +K++
Sbjct: 284 ICVLKDCSMLVMDEADKLLAP-EFQPSIEQLIHFLPANRQLLMFSATFPVTVKDFKEKYL 342
Query: 245 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 304
P I + DE LTL G+ Q+Y + E +K LN L L NQ +IF SV+R L
Sbjct: 343 PRPYVINLMDE--LTLKGITQYYAFVEERQKVHCLNTLFLKLQINQSIIFCNSVNRVELL 400
Query: 305 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 364
K + E + IH+ M Q+ R + F+ G R LV TDL RGI I+ VN+VIN+D
Sbjct: 401 AKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIGIQAVNVVINFD 460
Query: 365 MPDSADTYLHRVGRAGRFGTKGLAITFVS 393
P +++TYLHRVGR+GRFG GLA+ ++
Sbjct: 461 FPKTSETYLHRVGRSGRFGHLGLAVNLIT 489
>gi|315049467|ref|XP_003174108.1| ATP-dependent RNA helicase fal1 [Arthroderma gypseum CBS 118893]
gi|311342075|gb|EFR01278.1| ATP-dependent RNA helicase fal1 [Arthroderma gypseum CBS 118893]
Length = 403
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 147/377 (38%), Positives = 217/377 (57%), Gaps = 10/377 (2%)
Query: 20 DAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQ 79
D QA +S A + +K+ V + F D LK LLR I G+E PS VQ I Q
Sbjct: 6 DRQADESTAERMEFSTSKEVTV---APTFDDMHLKENLLRGIYAYGYESPSAVQSRAIVQ 62
Query: 80 AILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFST 139
G D I QA+SG GKTA F +S LQ + + ALVL TRELA QI
Sbjct: 63 ICKGRDTIAQAQSGTGKTATFSISILQVIDTVLRESQALVLSPTRELATQIQSVVMALGD 122
Query: 140 YLPDIKVAVFYGGVNIKIHKDLLKNECPQ-IVVGTPGRILALARDKDLSLKNVRHFILDE 198
Y+ +++ GG N+ +D+ K E Q +V GTPGR+ + R + L +N++ +LDE
Sbjct: 123 YM-NVQCHACIGGTNVG--EDIRKLEHGQHVVSGTPGRVADMIRRRHLRTRNIKMLVLDE 179
Query: 199 CDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKL 258
D++L R + ++++ P QV++ SATL ++ + KFM DP+ I V + +L
Sbjct: 180 ADELLNR-GFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRILVKRD-EL 237
Query: 259 TLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSIC 317
TL GL Q++I + + E K L DL D L Q VIF + + L + E NF
Sbjct: 238 TLEGLKQYFIAVEKEEWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSS 297
Query: 318 IHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 377
+H M Q+ER + + F++GN R+L++TD+ RGID+++V++VINYD+P + + Y+HR+G
Sbjct: 298 MHGEMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIG 357
Query: 378 RAGRFGTKGLAITFVSS 394
R+GRFG KG+AI FV+S
Sbjct: 358 RSGRFGRKGVAINFVTS 374
>gi|328865226|gb|EGG13612.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 414
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 144/390 (36%), Positives = 219/390 (56%), Gaps = 22/390 (5%)
Query: 6 DNEYEDEL-LDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDS 64
DN ++ L L ++E Q D AT+ N F D LK +LLR I +
Sbjct: 13 DNNWKSTLILPPKDERKQTEDVTATEGNE--------------FDDLHLKRDLLRGIFEK 58
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
G+ PS +Q + IP A+ G D++ +AK+G GKTA F++ L++T+P + L+L TR
Sbjct: 59 GYVKPSPIQEKAIPIALAGKDIMARAKNGTGKTASFLIPALEKTDPTKDYIQVLILVPTR 118
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARD 183
ELA Q + Y+ ++KV GG ++K D+++ E I+V TPGR+L LA+
Sbjct: 119 ELALQTSQVCKELGKYM-NVKVMATTGGTSLK--DDIMRLYETVHILVATPGRVLDLAQK 175
Query: 184 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF 243
+L N I+DE DK+L S D + ++++ P +Q+++FSAT ++ +
Sbjct: 176 NVANLSNTHTIIMDEADKLL-SQDFQPLIEQLINFLPPQRQILLFSATFPLTVKTFKDNY 234
Query: 244 MQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAE 303
+Q EI + +E LTL G+ Q+Y + E +K LN L L NQ +IF SV+R
Sbjct: 235 LQKAYEINLMEE--LTLKGVTQYYAFVDERQKIHCLNTLFSKLQINQSIIFCNSVNRVEL 292
Query: 304 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 363
L K + E + IH+ M Q R + F+ G+ R LV++DL RGIDI+ VN+VIN+
Sbjct: 293 LAKKITELGYSCFYIHAKMQQAHRNRVFHDFRNGHCRNLVSSDLFTRGIDIQDVNVVINF 352
Query: 364 DMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
D P ++TYLHR+GR+GRFG GLAI ++
Sbjct: 353 DFPKHSETYLHRIGRSGRFGHLGLAINLIT 382
>gi|330822482|ref|XP_003291680.1| hypothetical protein DICPUDRAFT_156303 [Dictyostelium purpureum]
gi|325078116|gb|EGC31785.1| hypothetical protein DICPUDRAFT_156303 [Dictyostelium purpureum]
Length = 397
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 143/362 (39%), Positives = 214/362 (59%), Gaps = 8/362 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F L ELLR I + GFE PS +Q I I G D I QA+SG GKTA F + LQ
Sbjct: 25 FESMGLGEELLRGIYNYGFEKPSAIQQRAIVPIIKGRDTIAQAQSGTGKTATFSIGALQC 84
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ N AL+L TRELA QI S Y+ +++V GG N+ D+ K E
Sbjct: 85 IDVNVRSPQALILSPTRELAQQIQKVALALSEYM-NVQVHACVGGKNM--SDDIKKLETG 141
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
IV GTPGR+L + K LS ++++ ILDE D+ML SL ++ + ++++ P Q++
Sbjct: 142 VHIVSGTPGRVLDMITRKSLSTRHIKMMILDEADEML-SLGFQQQINDVYRYLPEATQIV 200
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDA 285
+ SATL++++ + +KFM P+ I + + +LTL G+ Q ++ + + E K L D+ D+
Sbjct: 201 LVSATLTQDVVTMTEKFMSKPVRILLKRD-ELTLDGIKQFFVSVEKEEWKFGTLCDIYDS 259
Query: 286 LDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVAT 345
L Q VIF + + +L + + E NF +H M Q+ER K F+ G R+L+ T
Sbjct: 260 LTITQAVIFCNTKKKVDQLTEKMREANFTVASMHGDMVQKEREEIIKSFRSGENRVLITT 319
Query: 346 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVS 405
D++ RGID+++V++VINYD+P + YLHR+GR+GRFG KG+AI FV + SD IL +
Sbjct: 320 DILARGIDVQQVSLVINYDLPIDRENYLHRIGRSGRFGRKGVAINFVKN-SDIRILRDIE 378
Query: 406 KF 407
+F
Sbjct: 379 QF 380
>gi|449544646|gb|EMD35619.1| hypothetical protein CERSUDRAFT_96734 [Ceriporiopsis subvermispora
B]
Length = 502
Score = 247 bits (631), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 143/347 (41%), Positives = 204/347 (58%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D L+ ELL I ++GFE PS +Q E IP A+ DV+ +AK+G GKTA FV+ TLQQ
Sbjct: 47 FEDMFLRRELLMGIFEAGFEKPSPIQEEAIPVALAKRDVLARAKNGTGKTAAFVIPTLQQ 106
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
+ N ++ AL+L TRELA Q + ++ +V V GG +K D+L+ +E
Sbjct: 107 VDVNKNKIQALLLVPTRELALQTAQVCKILGKHM-GAQVMVTTGGTTLK--DDILRLSEA 163
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
++VGTPGRIL LA L F++DE DK+L S + ++++ P ++QVM
Sbjct: 164 VHVLVGTPGRILDLAGKNVADLSECPVFVMDEADKLL-SPEFAPVMEQLLSYLPKERQVM 222
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ +K M+ P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 223 LFSATFPMIVKDFKEKHMRSPHEINLMDE--LTLRGVTQYYAYVEERQKVHCLNTLFSKL 280
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q R + F+ G R LV +D
Sbjct: 281 QINQSIIFCNSTNRVELLAKKVTELGYSCFYSHAKMLQSHRNRVFHDFRNGVCRNLVCSD 340
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +++TYLHR+GR+GRFG GLAI V+
Sbjct: 341 LLTRGIDIQAVNVVINFDFPKNSETYLHRIGRSGRFGHLGLAINLVT 387
>gi|356520426|ref|XP_003528863.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 8-like [Glycine max]
Length = 500
Score = 247 bits (631), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 147/390 (37%), Positives = 218/390 (55%), Gaps = 18/390 (4%)
Query: 10 EDELLDYEEEDAQA-----PDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDS 64
+ E +D +D +A P K A KG + F D+ LK ELL I +
Sbjct: 91 QSEAVDSSSQDWKARLKIPPADTRYKTEDVTATKG------NEFEDYFLKRELLMGIYEK 144
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFE PS +Q E IP A+ G D++ +AK+G GKTA F + L++ + + + ++L TR
Sbjct: 145 GFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTR 204
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARD 183
ELA Q + +L I+V V GG ++K D+++ P ++VGTPGRIL LA+
Sbjct: 205 ELALQTSQVCKELGKHL-KIQVMVTTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLAKK 261
Query: 184 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF 243
LK+ ++DE DK+L S + + ++++ P +Q++MFSAT ++ ++
Sbjct: 262 GVCILKDCAMLVMDEADKLL-SPEFQPSIEQLIHFLPTTRQILMFSATFPVTVKDFKDRY 320
Query: 244 MQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAE 303
+Q P I + DE LTL G+ Q Y + E +K LN L L NQ +IF SV+R
Sbjct: 321 LQKPYVINLMDE--LTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVEL 378
Query: 304 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 363
L K + E + IH+ M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+
Sbjct: 379 LAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINF 438
Query: 364 DMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
D P +A+TYLHRVGR+GRFG GLA+ ++
Sbjct: 439 DFPKNAETYLHRVGRSGRFGHLGLAVNLIT 468
>gi|238878859|gb|EEQ42497.1| hypothetical protein CAWG_00709 [Candida albicans WO-1]
Length = 550
Score = 247 bits (631), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 141/347 (40%), Positives = 204/347 (58%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F DF LK ELL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA F++ LQ
Sbjct: 32 FEDFNLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDILARAKNGTGKTASFIIPCLQL 91
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P +V AL+L TRELA Q ++ + V GG +++ D+++ P
Sbjct: 92 VKPKLNKVQALILVPTRELALQTSQVVRTLGKHV-GTQCMVTTGGTSLR--DDIVRLHDP 148
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
I+VGTPGR+L LA K + L F++DE DKML S + + +++I + P ++Q +
Sbjct: 149 VHILVGTPGRVLDLAARKVVDLLECPLFVMDEADKML-SREFKGIIEQILEFFPPNRQAL 207
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K + P EI + DE LTL G+ Q Y + E +K LN L L
Sbjct: 208 LFSATFPLAVKSFMDKHLTKPYEINLMDE--LTLKGISQFYAFVEEKQKLHCLNTLFSKL 265
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q+ R + F++G R LV +D
Sbjct: 266 QINQSIIFCNSTNRVELLAKKITELGYSCYYSHAKMPQQARNKVFHEFRQGKVRNLVCSD 325
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI +S
Sbjct: 326 LLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLMS 372
>gi|357146923|ref|XP_003574159.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 12-like
[Brachypodium distachyon]
Length = 523
Score = 247 bits (631), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 143/372 (38%), Positives = 210/372 (56%), Gaps = 14/372 (3%)
Query: 23 APDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAIL 82
APD+ + A K + F D+ LK ELL I + GFE PS +Q E IP A+
Sbjct: 133 APDTRYRTEDVTATK-------GNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALT 185
Query: 83 GMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLP 142
G D++ +AK+G GKTA F + L++ +P + ++L TRELA Q + YL
Sbjct: 186 GSDILARAKNGTGKTAAFCIPALEKIDPEKNAIQVVILVPTRELALQTSQVCKELGKYL- 244
Query: 143 DIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKNVRHFILDECDK 201
+I+V V GG ++K D+++ P ++ GTPGRIL L R L I+DE DK
Sbjct: 245 NIEVMVSTGGTSLK--DDIMRLYQPVHLLAGTPGRILDLTRKGICMLNECSMLIMDEADK 302
Query: 202 MLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH 261
+L + + + V+++ P +Q+++FSAT ++ +K++ P I + DE LTL
Sbjct: 303 LL-APEFQPSVEQLISFLPASRQLLLFSATFPVTVKDFKQKYLPRPYVINLMDE--LTLK 359
Query: 262 GLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSG 321
G+ Q+Y + E +K LN L L NQ +IF SV+R L K + E + IH+
Sbjct: 360 GITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAK 419
Query: 322 MSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 381
M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+D P +A+TYLHRVGR+GR
Sbjct: 420 MLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKTAETYLHRVGRSGR 479
Query: 382 FGTKGLAITFVS 393
FG GLA+ ++
Sbjct: 480 FGHLGLAVNLIT 491
>gi|342320339|gb|EGU12280.1| ATP-dependent RNA helicase dhh1 [Rhodotorula glutinis ATCC 204091]
Length = 557
Score = 247 bits (631), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 147/384 (38%), Positives = 213/384 (55%), Gaps = 27/384 (7%)
Query: 14 LDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQ 73
L + Q D ATK N F D+ LK ELL I ++GFE PS +Q
Sbjct: 24 LPTRDTRPQTEDVTATKGNE--------------FEDYFLKRELLMGIFEAGFERPSPIQ 69
Query: 74 HECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQ---I 130
E IP A+ G D++ +AK+G GKTA F++ L++ P ++ AL+L TRELA Q +
Sbjct: 70 EEAIPIALTGRDILARAKNGTGKTAAFIIPVLERVNPKIPKIQALLLVPTRELALQTSQV 129
Query: 131 CHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLK 189
C + + +V V GG ++ D+L+ + I+VGTPGRIL LA L
Sbjct: 130 CKTLGKHT----GAQVMVTTGGTTLR--DDILRLGDTVHILVGTPGRILDLAGKGIADLS 183
Query: 190 NVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPME 249
F++DE DK+L S + ++++ P ++QVM+FSAT ++ K+M+ P E
Sbjct: 184 QCPMFVMDEADKLL-SPEFTPVIEQLLSFMPKERQVMLFSATFPLIVKDFKDKWMRKPYE 242
Query: 250 IYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLV 309
I + DE LTL G+ Q+Y L E +K LN L L NQ +IF S +R L K +
Sbjct: 243 INLMDE--LTLRGVTQYYAFLEERQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKIT 300
Query: 310 ECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSA 369
E + H+ M Q+ R + F+ G R LV +DL+ RGIDI+ VN+VIN+D P +A
Sbjct: 301 ELGYSCFYSHARMLQQHRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNA 360
Query: 370 DTYLHRVGRAGRFGTKGLAITFVS 393
+TYLHR+GR+GR+G GLAI ++
Sbjct: 361 ETYLHRIGRSGRYGHLGLAINLIT 384
>gi|154270258|ref|XP_001535985.1| hypothetical protein HCAG_09069 [Ajellomyces capsulatus NAm1]
gi|150410056|gb|EDN05444.1| hypothetical protein HCAG_09069 [Ajellomyces capsulatus NAm1]
Length = 457
Score = 247 bits (631), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 139/337 (41%), Positives = 198/337 (58%), Gaps = 7/337 (2%)
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA 117
+ I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++T P + A
Sbjct: 1 MMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERTNPKNSKTQA 60
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGR 176
L+L TRELA Q + +L I V V GG ++ D+++ NE I+VGTPGR
Sbjct: 61 LILVPTRELALQTSQVCKTLGKHL-GINVMVTTGGTGLQ--DDIIRLNEAVHIIVGTPGR 117
Query: 177 ILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEI 236
IL LA L F++DE DK+L S + ++++ P D+QVM+FSAT +
Sbjct: 118 ILDLASKGVADLSECSTFVMDEADKLL-SPEFTPVIEQLLSFHPKDRQVMLFSATFPMIV 176
Query: 237 RPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVK 296
+ K M++P EI + DE LTL G+ Q+Y + E +K LN L L NQ +IF
Sbjct: 177 KSFKDKHMRNPYEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFSKLQINQSIIFCN 234
Query: 297 SVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIER 356
S +R L K + E + H+ M Q R + F+ G R LV +DL+ RGIDI+
Sbjct: 235 STNRVELLAKKITELGYSCFYSHAKMLQHNRNRVFHDFRNGVCRNLVCSDLLTRGIDIQA 294
Query: 357 VNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
VN+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 295 VNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLIN 331
>gi|384490623|gb|EIE81845.1| ATP-dependent RNA helicase DHH1 [Rhizopus delemar RA 99-880]
Length = 494
Score = 247 bits (630), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 147/389 (37%), Positives = 213/389 (54%), Gaps = 21/389 (5%)
Query: 6 DNEYEDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSG 65
+N ++ L ++ Q D ATK N F D+ LK ELL I ++G
Sbjct: 17 ENWKQNLALPRKDTRPQTEDVTATKGNE--------------FEDYFLKRELLMGIFEAG 62
Query: 66 FEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRE 125
FE PS +Q E IP A+ D++ +AK+G GKTA FV+ TL++ ++ AL+L TRE
Sbjct: 63 FERPSPIQEEAIPIALANRDILARAKNGTGKTAAFVIPTLEKINNKVSKIQALLLVPTRE 122
Query: 126 LAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDK 184
LA Q + +L +I+V V GG +K D+++ +E +VVGTPGRIL LA
Sbjct: 123 LALQTAQVCKTLGKHL-NIQVMVTTGGTTLK--DDIMRLSEIVHVVVGTPGRILDLASKG 179
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 244
F++DE DK+L S + + ++ P ++Q+M+FSAT ++ K +
Sbjct: 180 VADFSQANTFVMDEADKLL-SPEFTPVIDQLISYFPKNRQIMLFSATFPMIVKSFKDKHL 238
Query: 245 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 304
P EI + DE LTL G+ Q+Y + E K LN L L NQ +IF S +R L
Sbjct: 239 TKPYEINLMDE--LTLRGVTQYYAYVEEKHKVHCLNTLFSKLQINQSIIFCNSTNRVELL 296
Query: 305 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 364
K + E + H+ M Q R + F+ G R LV +DL+ RGIDI+ VN+VIN+D
Sbjct: 297 AKKITELGYSCFYSHAKMLQSHRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFD 356
Query: 365 MPDSADTYLHRVGRAGRFGTKGLAITFVS 393
P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 357 FPKNAETYLHRIGRSGRFGHLGLAINLIT 385
>gi|326505420|dbj|BAJ95381.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326522769|dbj|BAJ88430.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 524
Score = 247 bits (630), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 137/347 (39%), Positives = 203/347 (58%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D+ LK ELL I + GFE PS +Q E IP A+ G D++ +AK+G GKTA F + L++
Sbjct: 152 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 211
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P + ++L TRELA Q + YL +I+V V GG ++K D+++ P
Sbjct: 212 IDPEKNAIQVVILVPTRELALQTSQVCKELGKYL-NIEVMVSTGGTSLK--DDIMRLYQP 268
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
++ GTPGRIL L + L I+DE DK+L + + + V+++ + P +Q++
Sbjct: 269 VHLLAGTPGRILDLTKKGICMLNECSMLIMDEADKLL-APEFQPSVEQLIRYLPASRQLL 327
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ +K++ P I + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 328 LFSATFPVTVKDFKQKYLPRPYVINLMDE--LTLKGITQYYAFVEERQKVHCLNTLFSKL 385
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF SV+R L K + E + IH+ M Q+ R + F+ G R LV TD
Sbjct: 386 QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTD 445
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L RGIDI+ VN+VIN+D P +A+TYLHRVGR+GRFG GLA+ ++
Sbjct: 446 LFTRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGLAVNLIT 492
>gi|392561852|gb|EIW55033.1| DEAD-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 503
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 142/347 (40%), Positives = 204/347 (58%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D L+ ELL I ++GFE PS +Q E IP A+ DV+ +AK+G GKTA FV+ +LQQ
Sbjct: 43 FEDMYLRRELLMGIYEAGFERPSPIQEEAIPIALTKRDVLARAKNGTGKTAAFVIPSLQQ 102
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
+ N ++ AL+L TRELA Q + ++ ++V V GG +K D+++ +E
Sbjct: 103 VDVNKNKIQALLLVPTRELALQTAQVCKNLGKHM-GVQVMVTTGGTTLK--DDIMRLSEE 159
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
++VGTPGRIL LA L F++DE DK+L S + ++++ P D+QVM
Sbjct: 160 VHVLVGTPGRILDLAGKGVADLSECPVFVMDEADKLL-SPEFAPVMEQLLSYLPKDRQVM 218
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K M+ P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 219 LFSATFPMIVKDFKDKHMKSPYEINLMDE--LTLRGVTQYYAYVEERQKVHCLNTLFSKL 276
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q R + F+ G R LV +D
Sbjct: 277 QINQSIIFCNSTNRVELLAKKVTELGYSCFYSHAKMLQSHRNRVFHDFRNGVCRNLVCSD 336
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +++TYLHR+GR+GRFG GLAI V+
Sbjct: 337 LLTRGIDIQAVNVVINFDFPKNSETYLHRIGRSGRFGHLGLAINLVT 383
>gi|430814141|emb|CCJ28577.1| unnamed protein product [Pneumocystis jirovecii]
Length = 806
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 138/347 (39%), Positives = 202/347 (58%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F DF LK ELL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA F++ L++
Sbjct: 47 FEDFYLKRELLMGIFEAGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFIIPALEK 106
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ AL+L TRELA Q H + ++ I V V GG +++ +D+++ P
Sbjct: 107 LNSKKPKTQALILVPTRELALQTSHVCKTLGKHM-GINVMVTTGGTSLQ--QDIIRLHDP 163
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
++VGTPGRIL LA FI+DE DK+L SL+ ++++ P D+Q+M
Sbjct: 164 VHVIVGTPGRILDLAGKGVAEFSECFTFIMDEADKLL-SLEFTPVIEQLLAYFPKDRQIM 222
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
++SAT ++ K + P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 223 LYSATFPLVVKSFMDKHLSKPYEINLMDE--LTLRGVTQYYAFVEEKQKVHCLNTLFSKL 280
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q R + F+ G R LV +D
Sbjct: 281 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMLQNHRNRVFHDFRNGVCRNLVCSD 340
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +++TYLHR+GR+GRFG GLAI ++
Sbjct: 341 LLTRGIDIQAVNVVINFDFPKNSETYLHRIGRSGRFGHLGLAINLIN 387
>gi|256077147|ref|XP_002574869.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
gi|353230753|emb|CCD77170.1| putative dead box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 401
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 140/363 (38%), Positives = 212/363 (58%), Gaps = 8/363 (2%)
Query: 47 GFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQ 106
F L+ +LLR I GFE PS +Q I Q + G DVI QA+SG GKTA +S LQ
Sbjct: 29 SFDSMCLRDDLLRGIYAYGFERPSAIQQRAIKQIVKGRDVIAQAQSGTGKTATLGISILQ 88
Query: 107 QTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNEC 166
+ + ALVL TRELA QI Y+ +++ YGG NI +D+ K +
Sbjct: 89 MLDTQLRETQALVLSPTRELASQIQKVILALGDYM-NVQCHACYGGTNI--GEDIRKLDY 145
Query: 167 PQ-IVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQV 225
Q ++ GTPGR+ + R + L + V+ F+LDE D+ML+ + + ++++ P QV
Sbjct: 146 GQHVISGTPGRVFDMIRRRSLRTRAVKLFVLDEADEMLDK-GFKEQIYDVYRYLPPGTQV 204
Query: 226 MMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLD 284
++ SAT+ EI + KFM +P+ I V + +LTL G+ Q ++ + E K L DL D
Sbjct: 205 VLLSATMPHEILEMTSKFMTNPVRILVKRD-ELTLEGIKQFFVAVEREEWKFDTLCDLYD 263
Query: 285 ALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVA 344
L Q VIF + + A L + +++ NF +H M Q+ER K F+ G+ R+L+
Sbjct: 264 TLTVTQSVIFCNTKRKVAWLTEKMLKNNFTVASMHGDMVQKEREEIMKDFRAGDSRVLIT 323
Query: 345 TDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
TDL RGID+++V++VINYD+P++ + Y+HR+GR+GRFG KG+AI FV + D IL +
Sbjct: 324 TDLWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKT-DDIKILRDI 382
Query: 405 SKF 407
++
Sbjct: 383 EQY 385
>gi|325187582|emb|CCA22119.1| predicted protein putative [Albugo laibachii Nc14]
gi|325188860|emb|CCA23389.1| unknown putative [Albugo laibachii Nc14]
Length = 417
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 145/380 (38%), Positives = 216/380 (56%), Gaps = 12/380 (3%)
Query: 17 EEEDAQAPDSVATKANGEAAK---KGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQ 73
EEED + V K G+ + + + + F D+ LK ELL I + GFEHPS +Q
Sbjct: 15 EEEDWK----VGLKRPGKDTRIQTEDVTNVKGNEFEDYFLKRELLMGIFEKGFEHPSPIQ 70
Query: 74 HECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHE 133
E +P + G +V+ +AK+G GKTA F++ L++TE + + L+L TRELA Q
Sbjct: 71 EEAVPIILAGRNVMARAKNGTGKTAAFIIPCLEKTETSKKHIQVLILVPTRELALQTSAI 130
Query: 134 FERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRH 193
+ ++ ++ V GG ++K L N I+VGTPGRI+ LA L N
Sbjct: 131 VKEIGKHM-GVECMVSTGGTSLKDDIMRLYNTV-HILVGTPGRIMDLANKGVADLSNCST 188
Query: 194 FILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVD 253
I+DE DK+L S + + ++++ T +Q+ +FSAT ++ +F+++P EI +
Sbjct: 189 VIMDEADKLL-SPEFQPLLEQLLNHTAKKRQICLFSATFPVTVKAFKDRFIENPYEINLM 247
Query: 254 DEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNF 313
DE LTL G+ Q Y + E +K LN L LD NQ +IF SV+R L K + E +
Sbjct: 248 DE--LTLKGVSQFYAFVEERQKVHCLNTLFSKLDINQSIIFCNSVNRVELLAKKVTELGY 305
Query: 314 PSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYL 373
IH+ MSQ R + F+ G R LV +DL RGIDI+ VN+VIN+D P +++TYL
Sbjct: 306 SCFYIHAKMSQAHRNRVFHEFRNGATRHLVCSDLFTRGIDIQTVNVVINFDFPKNSETYL 365
Query: 374 HRVGRAGRFGTKGLAITFVS 393
HR+GR+GRFG GLAI+ ++
Sbjct: 366 HRIGRSGRFGHLGLAISMIT 385
>gi|224127608|ref|XP_002320116.1| predicted protein [Populus trichocarpa]
gi|222860889|gb|EEE98431.1| predicted protein [Populus trichocarpa]
Length = 485
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 141/385 (36%), Positives = 218/385 (56%), Gaps = 8/385 (2%)
Query: 10 EDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHP 69
+ E +D +D +A + A+ + + F D+ LK ELL I + GFE P
Sbjct: 76 QSEAVDSSSQDWKAKLKIPP-ADTRYQTEDVTATKGNDFEDYFLKRELLMGIYEKGFERP 134
Query: 70 SEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQ 129
S +Q E IP A+ G D++ +AK+G GKTA F + L++ + + + ++L TRELA Q
Sbjct: 135 SPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNFIQVVILVPTRELALQ 194
Query: 130 ICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSL 188
+ +L I+V GG ++K D+++ P ++VGTPGRIL LA+ L
Sbjct: 195 TSQVCKELGKHL-KIQVMATTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLAKKGVCIL 251
Query: 189 KNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPM 248
K+ +LDE DK+L S + + ++++ + P +Q++MFSAT ++ ++++ P
Sbjct: 252 KDCSMLVLDEADKLL-SPEFQPSIEQLIRFLPSSRQILMFSATFPVTVKDFKDRYLEKPY 310
Query: 249 EIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLL 308
I + DE LTL G+ Q+Y + E +K LN L L NQ +IF SV+R L K +
Sbjct: 311 VINLMDE--LTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKI 368
Query: 309 VECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDS 368
E + IH+ M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+D P +
Sbjct: 369 TELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKN 428
Query: 369 ADTYLHRVGRAGRFGTKGLAITFVS 393
++TYLHRVGR+GRFG GLA+ ++
Sbjct: 429 SETYLHRVGRSGRFGHLGLAVNLIT 453
>gi|387887762|ref|YP_006318060.1| cold-shock DeaD box ATP-dependent RNA helicase [Escherichia blattae
DSM 4481]
gi|414594220|ref|ZP_11443859.1| ATP-dependent RNA helicase DeaD [Escherichia blattae NBRC 105725]
gi|386922595|gb|AFJ45549.1| cold-shock DeaD box ATP-dependent RNA helicase [Escherichia blattae
DSM 4481]
gi|403194810|dbj|GAB81511.1| ATP-dependent RNA helicase DeaD [Escherichia blattae NBRC 105725]
Length = 632
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 134/365 (36%), Positives = 203/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L L
Sbjct: 8 FSDLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLNN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L+L ++ +LDE D+ML + DV+ I P + Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLNLSSLHGLVLDEADEMLR-MGFIEDVETIMAQIPAEHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FMQDP E+ + T + Q Y + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMQDPQEVRIQSSVT-TRPDISQSYWTAWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P A++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDAESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|448511655|ref|XP_003866579.1| hypothetical protein CORT_0A07540 [Candida orthopsilosis Co 90-125]
gi|380350917|emb|CCG21140.1| hypothetical protein CORT_0A07540 [Candida orthopsilosis Co 90-125]
Length = 427
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 139/348 (39%), Positives = 204/348 (58%), Gaps = 7/348 (2%)
Query: 47 GFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQ 106
F +F LK ELL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA F++ LQ
Sbjct: 32 SFEEFNLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDILARAKNGTGKTASFIIPCLQ 91
Query: 107 QTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NE 165
+P ++ AL+L TRELA Q +L ++ V GG +++ D+++ N+
Sbjct: 92 LCKPKLNKIQALILVPTRELALQTSQVVRTLGKHL-GVQCMVTTGGTSLR--DDIVRLND 148
Query: 166 CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQV 225
I+VGTPGR+L LA K L F++DE DKML S + + +++I + P +Q
Sbjct: 149 PVHILVGTPGRVLDLASRKLADLSECPLFVMDEADKML-SREFKNIIEQILEFFPPHRQA 207
Query: 226 MMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDA 285
++FSAT ++ + + P EI + DE LTL G+ Q Y + E +K LN L
Sbjct: 208 LLFSATFPITVKHFMDQHLNKPYEINLMDE--LTLKGISQFYAFVEEKQKLHCLNTLFSK 265
Query: 286 LDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVAT 345
L NQ +IF S +R L K + E + H+ M Q+ R + F++G R LV +
Sbjct: 266 LQINQSIIFCNSTNRVELLAKKITELGYSCYYSHAKMPQQARNKVFHEFRQGKVRNLVCS 325
Query: 346 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
DL+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI +S
Sbjct: 326 DLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLMS 373
>gi|356520424|ref|XP_003528862.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 8-like [Glycine max]
Length = 503
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 147/390 (37%), Positives = 217/390 (55%), Gaps = 18/390 (4%)
Query: 10 EDELLDYEEEDAQA-----PDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDS 64
+ E +D +D +A P K A KG + F D+ LK ELL I +
Sbjct: 94 QSEAVDSSSQDWKARLKIPPADTRYKTEDVTATKG------NEFEDYFLKRELLMGIYEK 147
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFE PS +Q E IP A+ G D++ +AK+G GKTA F + L++ + + + ++L TR
Sbjct: 148 GFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTR 207
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARD 183
ELA Q + +L I+V V GG ++K D+L+ P ++VGTPGRIL L +
Sbjct: 208 ELALQTSQVCKELGKHL-KIQVMVTTGGTSLK--DDILRLYQPVHLLVGTPGRILDLTKK 264
Query: 184 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF 243
LK+ ++DE DK+L S + + ++++ P +Q++MFSAT ++ ++
Sbjct: 265 GVCILKDCAMLVMDEADKLL-SPEFQPSIEQLIHFLPTTRQILMFSATFPVTVKDFKDRY 323
Query: 244 MQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAE 303
+Q P I + DE LTL G+ Q Y + E +K LN L L NQ +IF SV+R
Sbjct: 324 LQKPYVINLMDE--LTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVEL 381
Query: 304 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 363
L K + E + IH+ M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+
Sbjct: 382 LAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINF 441
Query: 364 DMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
D P +A+TYLHRVGR+GRFG GLA+ ++
Sbjct: 442 DFPKNAETYLHRVGRSGRFGHLGLAVNLIT 471
>gi|146418894|ref|XP_001485412.1| hypothetical protein PGUG_03141 [Meyerozyma guilliermondii ATCC
6260]
gi|152013508|sp|A5DIP0.1|DHH1_PICGU RecName: Full=ATP-dependent RNA helicase DHH1
gi|146390885|gb|EDK39043.1| hypothetical protein PGUG_03141 [Meyerozyma guilliermondii ATCC
6260]
Length = 547
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 138/356 (38%), Positives = 205/356 (57%), Gaps = 7/356 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F +F LK ELL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA F++ LQQ
Sbjct: 31 FEEFGLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDILARAKNGTGKTASFIIPALQQ 90
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ ++ L+L TRELA Q + +L ++ V GG ++ D+++ + P
Sbjct: 91 VKTKLNKIQVLILVPTRELALQTSQVVKTLGKHL-KLQCMVTTGGTLLR--DDVMRLDEP 147
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
I+VGTPGR+L LA F++DE DKML S + + +++I + P ++Q +
Sbjct: 148 VHILVGTPGRVLDLAARSIADFSECPMFVMDEADKML-SREFKGIIEQILEFFPKNRQSL 206
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K + P EI + DE LTL G+ Q Y + E +K LN L L
Sbjct: 207 LFSATFPLAVKSFMDKHLNKPYEINLMDE--LTLRGISQFYAFVEEKQKLHCLNTLFSKL 264
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q+ R + F++G+ R LV +D
Sbjct: 265 KINQAIIFCNSTNRVELLAKKITELGYSCYYSHAKMPQQARNKVFHEFRQGSVRTLVCSD 324
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILN 402
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI F+ + N
Sbjct: 325 LLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINFIHWDDRKSLFN 380
>gi|430814140|emb|CCJ28576.1| unnamed protein product [Pneumocystis jirovecii]
Length = 500
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 138/347 (39%), Positives = 202/347 (58%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F DF LK ELL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA F++ L++
Sbjct: 47 FEDFYLKRELLMGIFEAGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFIIPALEK 106
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ AL+L TRELA Q H + ++ I V V GG +++ +D+++ P
Sbjct: 107 LNSKKPKTQALILVPTRELALQTSHVCKTLGKHM-GINVMVTTGGTSLQ--QDIIRLHDP 163
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
++VGTPGRIL LA FI+DE DK+L SL+ ++++ P D+Q+M
Sbjct: 164 VHVIVGTPGRILDLAGKGVAEFSECFTFIMDEADKLL-SLEFTPVIEQLLAYFPKDRQIM 222
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
++SAT ++ K + P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 223 LYSATFPLVVKSFMDKHLSKPYEINLMDE--LTLRGVTQYYAFVEEKQKVHCLNTLFSKL 280
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q R + F+ G R LV +D
Sbjct: 281 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMLQNHRNRVFHDFRNGVCRNLVCSD 340
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +++TYLHR+GR+GRFG GLAI ++
Sbjct: 341 LLTRGIDIQAVNVVINFDFPKNSETYLHRIGRSGRFGHLGLAINLIN 387
>gi|168028511|ref|XP_001766771.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681980|gb|EDQ68402.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 406
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 140/380 (36%), Positives = 217/380 (57%), Gaps = 13/380 (3%)
Query: 15 DYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQH 74
D++ + P K A KG + F D+ LK ELL I + GFE PS +Q
Sbjct: 7 DWKAQLKLPPPDARYKTEDVTATKG------NEFEDYFLKRELLMGIYEKGFERPSPIQE 60
Query: 75 ECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEF 134
E IP A+ G D++ +AK+G GKTA F + +++ + N V L+L TRELA Q
Sbjct: 61 ESIPIALTGSDILARAKNGTGKTAAFCIPAIEKIDQNKNAVQVLLLVPTRELALQTSQVC 120
Query: 135 ERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKNVRH 193
+ + +L +I++ V GG +++ D+++ P ++VGTPGR+L LA +LK
Sbjct: 121 KELAKHL-NIQIMVTTGGTSLR--DDIMRLYQPVHLLVGTPGRVLDLANKGVCNLKECTM 177
Query: 194 FILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVD 253
++DE DK+L S + + V+++ P ++Q++++SAT ++ +F++ P I +
Sbjct: 178 LVMDEADKLL-SPEFQPLVEQLIGFLPENRQILLYSATFPVTVKSFKDRFLRKPYVINLM 236
Query: 254 DEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNF 313
DE LTL G+ Q+Y + E +K LN L L NQ +IF SV+R L K + E +
Sbjct: 237 DE--LTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGY 294
Query: 314 PSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYL 373
IH+ M Q R + F+ G R LV++DL RGIDI+ VN+VIN+D P +++TYL
Sbjct: 295 SCFYIHAKMLQSHRNRVFHDFRNGACRNLVSSDLFTRGIDIQAVNVVINFDFPKNSETYL 354
Query: 374 HRVGRAGRFGTKGLAITFVS 393
HRVGR+GRFG GLA+ ++
Sbjct: 355 HRVGRSGRFGHLGLAVNLIT 374
>gi|384491617|gb|EIE82813.1| ATP-dependent RNA helicase dhh1 [Rhizopus delemar RA 99-880]
Length = 453
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 139/347 (40%), Positives = 201/347 (57%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D+ LK ELL I ++GFE PS +Q E IP A+ D++ +AK+G GKTA FV+ TL++
Sbjct: 24 FEDYFLKRELLMGIFEAGFERPSPIQEEAIPIALTNRDILARAKNGTGKTAAFVIPTLEK 83
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
++ AL+L TRELA Q + +L +I+V V GG +K D+++ +E
Sbjct: 84 INNKMNKIQALLLVPTRELALQTAQVCKTLGKHL-NIQVMVTTGGTTLK--DDIMRLSEA 140
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
+VVGTPGRIL LA F++DE DK+L S + + ++ P ++Q+M
Sbjct: 141 VHVVVGTPGRILDLASKGVADFSQANTFVMDEADKLL-SPEFTPVIDQLISYFPKNRQIM 199
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K + P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 200 LFSATFPMIVKTFKDKHLAKPYEINLMDE--LTLRGVTQYYAYVEEKQKVHCLNTLFSKL 257
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q R + F+ G R LV +D
Sbjct: 258 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHARMLQSHRNRVFHDFRNGVCRNLVCSD 317
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 318 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLIT 364
>gi|390598985|gb|EIN08382.1| DEAD-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 505
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 143/347 (41%), Positives = 202/347 (58%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D L+ ELL I ++GFE PS +Q E IP A+ DV+ +AK+G GKTA FV+ LQQ
Sbjct: 41 FEDMFLRRELLMGIFEAGFERPSPIQEEAIPVALTKRDVLARAKNGTGKTAAFVIPALQQ 100
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
+ + ++ AL+L TRELA Q + ++ +V V GG +K D+++ +E
Sbjct: 101 IDISRPKIQALLLVPTRELALQTAQVCKALGKHM-GAQVMVTTGGTTLK--DDIMRLHET 157
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
++VGTPGRIL LA L F++DE DK+L S + ++++ P D+QVM
Sbjct: 158 VHVLVGTPGRILDLAGKNVADLSECPVFVMDEADKLL-SPEFAPVMEQLLAFLPRDRQVM 216
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K M+ P EI + DE LTL G+ Q+Y L E +K LN L L
Sbjct: 217 LFSATFPMIVKDFKDKHMKQPYEINLMDE--LTLRGVTQYYAFLEERQKVHCLNTLFSKL 274
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q R + F+ G R LV +D
Sbjct: 275 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMLQSHRNRVFHDFRNGVCRNLVCSD 334
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI V+
Sbjct: 335 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLVT 381
>gi|22328183|ref|NP_191975.2| DEAD-box ATP-dependent RNA helicase 8 [Arabidopsis thaliana]
gi|30678703|ref|NP_849535.1| DEAD-box ATP-dependent RNA helicase 8 [Arabidopsis thaliana]
gi|75330763|sp|Q8RXK6.1|RH8_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 8
gi|19423939|gb|AAL87312.1| putative RNA helicase [Arabidopsis thaliana]
gi|21280839|gb|AAM45033.1| putative RNA helicase [Arabidopsis thaliana]
gi|332656515|gb|AEE81915.1| DEAD-box ATP-dependent RNA helicase 8 [Arabidopsis thaliana]
gi|332656516|gb|AEE81916.1| DEAD-box ATP-dependent RNA helicase 8 [Arabidopsis thaliana]
Length = 505
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 147/391 (37%), Positives = 219/391 (56%), Gaps = 20/391 (5%)
Query: 10 EDELLDYEEEDAQA------PDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVD 63
+ E++D ED +A PD+ + A K + F D+ LK ELL I +
Sbjct: 96 QSEVIDPNSEDWKARLKLPAPDTRYRTEDVTATK-------GNEFEDYFLKRELLMGIYE 148
Query: 64 SGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHT 123
GFE PS +Q E IP A+ G D++ +AK+G GKTA F + L++ + + + A+++ T
Sbjct: 149 KGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLEKIDQDNNVIQAVIIVPT 208
Query: 124 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALAR 182
RELA Q + +L I+V V GG ++K D+++ P ++VGTPGRIL L +
Sbjct: 209 RELALQTSQVCKELGKHL-KIQVMVTTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLTK 265
Query: 183 DKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKK 242
LK+ ++DE DK+L S + + V+ + P +Q++MFSAT ++ +
Sbjct: 266 KGVCVLKDCSVLVMDEADKLL-SQEFQPSVEHLISFLPESRQILMFSATFPVTVKDFKDR 324
Query: 243 FMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAA 302
F+ +P I + DE LTL G+ Q Y + E +K LN L L NQ +IF SV+R
Sbjct: 325 FLTNPYVINLMDE--LTLKGITQFYAFVEERQKIHCLNTLFSKLQINQSIIFCNSVNRVE 382
Query: 303 ELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVIN 362
L K + E + IH+ M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN
Sbjct: 383 LLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVIN 442
Query: 363 YDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
+D P +A+TYLHRVGR+GRFG GLA+ ++
Sbjct: 443 FDFPKNAETYLHRVGRSGRFGHLGLAVNLIT 473
>gi|168026784|ref|XP_001765911.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682817|gb|EDQ69232.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 406
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 140/380 (36%), Positives = 217/380 (57%), Gaps = 13/380 (3%)
Query: 15 DYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQH 74
D++ + P K A KG + F D+ LK ELL I + GFE PS +Q
Sbjct: 7 DWKAQLKLPPPDARYKTEDVTATKG------NEFEDYFLKRELLMGIYEKGFERPSPIQE 60
Query: 75 ECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEF 134
E IP A+ G D++ +AK+G GKTA F + +++ + N V L+L TRELA Q
Sbjct: 61 ESIPIALTGSDILARAKNGTGKTAAFCIPAIEKIDQNKNAVQVLLLVPTRELALQTSQVC 120
Query: 135 ERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKNVRH 193
+ + +L +I++ V GG +++ D+++ P ++VGTPGR+L LA +LK
Sbjct: 121 KELAKHL-NIQIMVTTGGTSLR--DDIMRLYQPVHLLVGTPGRVLDLANKGVCNLKECTM 177
Query: 194 FILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVD 253
++DE DK+L S + + V+++ P ++Q++++SAT ++ +F++ P I +
Sbjct: 178 LVMDEADKLL-SPEFQPLVEQLIGFLPENRQILLYSATFPVTVKSFKDRFLRKPYVINLM 236
Query: 254 DEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNF 313
DE LTL G+ Q+Y + E +K LN L L NQ +IF SV+R L K + E +
Sbjct: 237 DE--LTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGY 294
Query: 314 PSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYL 373
IH+ M Q R + F+ G R LV++DL RGIDI+ VN+VIN+D P +++TYL
Sbjct: 295 SCFYIHAKMLQSHRNRVFHDFRNGACRNLVSSDLFTRGIDIQAVNVVINFDFPKNSETYL 354
Query: 374 HRVGRAGRFGTKGLAITFVS 393
HRVGR+GRFG GLA+ ++
Sbjct: 355 HRVGRSGRFGHLGLAVNLIT 374
>gi|115447545|ref|NP_001047552.1| Os02g0641800 [Oryza sativa Japonica Group]
gi|49388094|dbj|BAD25227.1| putative RNA helicase [Oryza sativa Japonica Group]
gi|113537083|dbj|BAF09466.1| Os02g0641800 [Oryza sativa Japonica Group]
gi|218191254|gb|EEC73681.1| hypothetical protein OsI_08237 [Oryza sativa Indica Group]
Length = 483
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 144/380 (37%), Positives = 212/380 (55%), Gaps = 13/380 (3%)
Query: 15 DYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQH 74
D++ + P + A KG + F D+ LK ELL I + GFE PS +Q
Sbjct: 84 DWKAQLKLPPQDTRYRTEDVTATKG------NEFEDYFLKRELLMGIYEKGFERPSPIQE 137
Query: 75 ECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEF 134
E IP A+ G D++ +AK+G GKTA F + L++ + + ++L TRELA Q
Sbjct: 138 ESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQEKNAIQVVILVPTRELALQTSQVC 197
Query: 135 ERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKNVRH 193
+ +L I+V V GG ++K D+++ P ++VGTPGRIL L + LK+
Sbjct: 198 KELGKHL-KIQVMVTTGGTSLK--DDIIRLYQPVHLLVGTPGRILDLTKKGICILKDCSM 254
Query: 194 FILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVD 253
I+DE DK+L S + + V+++ + P +Q++MFSAT ++ K++ P I +
Sbjct: 255 LIMDEADKLL-SPEFQPSVEQLIRYLPASRQILMFSATFPVTVKEFKDKYLPKPYVINLM 313
Query: 254 DEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNF 313
DE LTL G+ Q Y + E +K LN L L NQ +IF SV+R L K + E +
Sbjct: 314 DE--LTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGY 371
Query: 314 PSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYL 373
IH+ M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+D P +A+TYL
Sbjct: 372 SCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKTAETYL 431
Query: 374 HRVGRAGRFGTKGLAITFVS 393
HRVGR+GRFG GLA+ ++
Sbjct: 432 HRVGRSGRFGHLGLAVNLIT 451
>gi|374609445|ref|ZP_09682241.1| DEAD/DEAH box helicase domain protein [Mycobacterium tusciae JS617]
gi|373552414|gb|EHP79024.1| DEAD/DEAH box helicase domain protein [Mycobacterium tusciae JS617]
Length = 564
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 130/346 (37%), Positives = 195/346 (56%), Gaps = 3/346 (0%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D + P +LRAI D G+E PS +Q IP + G DV+ A++G GKTA F + L +
Sbjct: 15 FDDLQIHPSVLRAISDVGYESPSAIQAATIPPMMAGSDVVGLAQTGTGKTAAFAVPILSK 74
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P ALVL TRELA Q+ F R+ +LP I V YGG + L+
Sbjct: 75 IDPANKTTQALVLAPTRELALQVAEAFSRYGAHLPQINVLPIYGGSSYGPQLAGLRRGA- 133
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
Q+VVGTPGR++ L L ++ + +LDE D+ML+ + DV+ I TP KQV +
Sbjct: 134 QVVVGTPGRVIDHLEKGTLDLTHLDYLVLDEADEMLQ-MGFAEDVERILADTPEYKQVAL 192
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ IR + KK++ D +E+ V + T + Q YI+++ K L LL+
Sbjct: 193 FSATMPPGIRKITKKYLHDAVEVSVKSKTA-TAENITQRYIQVAGPRKMDALTRLLEVEP 251
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F +++FV++ E+ + L F + I+ ++Q +R K+G ILVATD+
Sbjct: 252 FEAMIVFVRTKQATEEVAEKLRARGFAAAAINGDIAQAQRERTIASLKDGTIDILVATDV 311
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
RG+D+ER++ V+NYD+P ++Y+HR+GR GR G G A+ FVS
Sbjct: 312 AARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGQALLFVS 357
>gi|324517616|gb|ADY46875.1| Eukaryotic initiation factor 4A-III, partial [Ascaris suum]
Length = 405
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 142/362 (39%), Positives = 209/362 (57%), Gaps = 8/362 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D L+ EL+R I GFE PS +Q I Q I G DVI QA+SG GKTA F +S LQ
Sbjct: 34 FDDMGLREELIRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQAQSGTGKTATFSISVLQG 93
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ AL+L TRELA QI Y+ +++ GG N+ +D+ K +
Sbjct: 94 LNTTIRETQALILSPTRELASQIQKVILALGDYM-NVQCHACIGGTNV--GEDIRKLDYG 150
Query: 168 Q-IVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
Q +V GTPGR+ + R ++L +++R +LDE D+ML + + +I++ P QV+
Sbjct: 151 QHVVSGTPGRVFDMIRRRNLRTRSIRMLVLDEADEMLNK-GFKEQLYDIYRYLPPGAQVV 209
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDA 285
+ SATL EI + KFM +P+ I V + +LTL G+ Q ++ + E K L DL D
Sbjct: 210 LLSATLPHEILEMTSKFMTNPIRILVKRD-ELTLEGIKQFFVAVDREEWKFDTLCDLYDT 268
Query: 286 LDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVAT 345
L Q VIF + + L + L E NF +H M Q+ER K F+ G R+L++T
Sbjct: 269 LTITQAVIFCNTRRKVDWLAEKLKEANFTVSAMHGDMEQKERDAIVKEFRSGTSRLLIST 328
Query: 346 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVS 405
D+ RG+DI +V++V+NYD+P++ + Y+HR+GR+GRFG KG+AI FV S D IL +
Sbjct: 329 DVFARGLDIPQVSLVVNYDLPNNRELYIHRIGRSGRFGRKGVAINFVKS-DDIRILRDIE 387
Query: 406 KF 407
++
Sbjct: 388 QY 389
>gi|443922420|gb|ELU41871.1| ATP dependent RNA helicase (Dhh1), putative [Rhizoctonia solani
AG-1 IA]
Length = 432
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 141/349 (40%), Positives = 204/349 (58%), Gaps = 9/349 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D L+ ELL I ++GFE PS +Q E IP A+ D++ +AK+G GKTA F + +LQQ
Sbjct: 41 FEDMGLRRELLMGIFEAGFERPSPIQEEAIPVALTRRDILARAKNGTGKTAAFTIPSLQQ 100
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
+P ++ A++L TRELA Q + ++ I V V GG +K D+++ +E
Sbjct: 101 VDPTKPKIQAMLLTPTRELALQTAQVCKNLGKHM-GINVMVTTGGTTLK--DDIIRLSEA 157
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
++VGTPGRIL LA + L R F++DE DK+L S + ++++ P D+QVM
Sbjct: 158 VHVLVGTPGRILDLAGKQVADLSQCRVFVMDEADKLL-SPEFTPVMEQLLSFVPSDRQVM 216
Query: 227 MFSATLSKEIR--PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLD 284
+FSAT ++ V K M+ P EI + DE LTL G+ Q+Y + E +K LN L
Sbjct: 217 LFSATFPMIVKQFKVNDKHMKSPHEINLMDE--LTLRGVTQYYAFVEERQKVHCLNTLFA 274
Query: 285 ALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVA 344
L NQ +IF S +R L K + E + H+ M Q R + F+ G R LV
Sbjct: 275 KLQINQSIIFCNSTNRVELLAKKVTELGYSCFYSHAKMVQSARNRVFHDFRNGVCRNLVC 334
Query: 345 TDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
+DL+ RGIDI+ VN+VIN+D P ++TYLHR+GR+GRFG GLAI ++
Sbjct: 335 SDLLTRGIDIQAVNVVINFDFPKHSETYLHRIGRSGRFGHLGLAINLIT 383
>gi|313217515|emb|CBY38596.1| unnamed protein product [Oikopleura dioica]
gi|313229431|emb|CBY24018.1| unnamed protein product [Oikopleura dioica]
Length = 401
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 138/357 (38%), Positives = 211/357 (59%), Gaps = 8/357 (2%)
Query: 53 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNP 112
++ +LLR I GFE PS +Q I Q I G DVI QA+SG GKTA F +STLQ + +
Sbjct: 35 IREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQAQSGTGKTATFSISTLQVLDTSV 94
Query: 113 GQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQ-IVV 171
+ AL+LC TRELA Q+ Y+ +++ V GG N+ +D+ K + Q +VV
Sbjct: 95 RETQALILCPTRELAQQVQKVILALGDYM-NVQAHVCIGGTNVG--EDIRKLDFGQHVVV 151
Query: 172 GTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSAT 231
GTPGR + R ++L +N++ ILDE D+ML + + ++++ P QV + SAT
Sbjct: 152 GTPGRTFDMIRRRNLRTRNIKLLILDEADEMLNR-GFKEQIYDVYRYLPPATQVCLVSAT 210
Query: 232 LSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQ 290
L EI + KFM DP+ I V + +LTL G+ Q ++ + E K L DL D L Q
Sbjct: 211 LPHEILEMTHKFMSDPIRILVKRD-ELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQ 269
Query: 291 VVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGR 350
VIF + + L + + E NF +H M Q+ER + F+ G R+L++TD+ R
Sbjct: 270 AVIFCSTKRKVDWLAEKMREANFTVSAMHGDMPQKERNEIMREFRSGQTRVLISTDVWAR 329
Query: 351 GIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
G+D+ +V+++INYD+P++ + Y+HR+GR+GR+G KG+AI FV + D IL + ++
Sbjct: 330 GLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVRN-DDIRILRDIEQY 385
>gi|348542726|ref|XP_003458835.1| PREDICTED: probable ATP-dependent RNA helicase DDX6-like
[Oreochromis niloticus]
Length = 478
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 135/356 (37%), Positives = 206/356 (57%), Gaps = 6/356 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D+ LK ELL I + G+E PS VQ E IP A+ G D++ +AK+G GK+ +++ L++
Sbjct: 90 FEDYCLKRELLMGIFEMGWEKPSPVQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 149
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
+ + A+V+ TRELA Q+ + S +L +K+ GG N++ D+++ +E
Sbjct: 150 IDLKKDHIQAIVMVPTRELALQMSQISIQLSKHLGGVKIMATTGGTNLR--DDIMRLDET 207
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
+V+ TPGRIL L + + + ++DE DK+L S D ++ I P D+Q++
Sbjct: 208 VHVVIATPGRILDLIKKGVAKVDKTQMLVMDEADKLL-SQDFVVLIENIISFMPKDRQIL 266
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
++SAT ++ K MQ P EI + +E LTL G+ Q+Y ++E +K LN L L
Sbjct: 267 LYSATFPISVQKFMSKHMQKPYEINLMEE--LTLKGITQYYAYVTERQKVHCLNTLFSRL 324
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S R L K + + + IH+ M QE R + F+ G R LV TD
Sbjct: 325 QINQSIIFCNSTQRVELLAKKITQLGYSCFYIHAKMMQEYRNRVFHDFRNGLCRNLVCTD 384
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILN 402
L RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI ++S ++ N
Sbjct: 385 LFTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLITSDDRYNLKN 440
>gi|403411513|emb|CCL98213.1| predicted protein [Fibroporia radiculosa]
Length = 488
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 142/347 (40%), Positives = 204/347 (58%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D L+ ELL I ++GFE PS +Q E IP A+ DV+ +AK+G GKTA FV+ +LQQ
Sbjct: 41 FEDMFLRRELLMGIFEAGFEKPSPIQEEAIPIALTKRDVLARAKNGTGKTAAFVIPSLQQ 100
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
+ N ++ AL+L TRELA Q + ++ I+V V GG +K D+++ +E
Sbjct: 101 IDVNKNKIQALLLVPTRELALQTSQVCKILGKHM-GIQVMVTTGGTTLK--DDIMRLSET 157
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
++VGTPGRIL LA L F++DE DK+L S + ++++ D+QVM
Sbjct: 158 VHVLVGTPGRILDLAGKNVADLSECPVFVMDEADKLL-SPEFAPVMEQLLSYISKDRQVM 216
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K+M+ P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 217 LFSATFPLIVKDFKDKYMRSPYEINLMDE--LTLRGVTQYYAYVEERQKVHCLNTLFSKL 274
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q R + F+ G R LV +D
Sbjct: 275 QINQSIIFCNSTNRVELLAKKVTELGYSCFYSHAKMLQSHRNRVFHDFRNGVCRNLVCSD 334
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +++TYLHR+GR+GRFG GLAI V+
Sbjct: 335 LLTRGIDIQAVNVVINFDFPKNSETYLHRIGRSGRFGHLGLAINLVT 381
>gi|143456931|sp|Q6H7S2.2|RH8_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 8
gi|49388093|dbj|BAD25226.1| putative RNA helicase [Oryza sativa Japonica Group]
gi|215701408|dbj|BAG92832.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623328|gb|EEE57460.1| hypothetical protein OsJ_07688 [Oryza sativa Japonica Group]
Length = 508
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 144/380 (37%), Positives = 212/380 (55%), Gaps = 13/380 (3%)
Query: 15 DYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQH 74
D++ + P + A KG + F D+ LK ELL I + GFE PS +Q
Sbjct: 109 DWKAQLKLPPQDTRYRTEDVTATKG------NEFEDYFLKRELLMGIYEKGFERPSPIQE 162
Query: 75 ECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEF 134
E IP A+ G D++ +AK+G GKTA F + L++ + + ++L TRELA Q
Sbjct: 163 ESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQEKNAIQVVILVPTRELALQTSQVC 222
Query: 135 ERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKNVRH 193
+ +L I+V V GG ++K D+++ P ++VGTPGRIL L + LK+
Sbjct: 223 KELGKHL-KIQVMVTTGGTSLK--DDIIRLYQPVHLLVGTPGRILDLTKKGICILKDCSM 279
Query: 194 FILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVD 253
I+DE DK+L S + + V+++ + P +Q++MFSAT ++ K++ P I +
Sbjct: 280 LIMDEADKLL-SPEFQPSVEQLIRYLPASRQILMFSATFPVTVKEFKDKYLPKPYVINLM 338
Query: 254 DEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNF 313
DE LTL G+ Q Y + E +K LN L L NQ +IF SV+R L K + E +
Sbjct: 339 DE--LTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGY 396
Query: 314 PSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYL 373
IH+ M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+D P +A+TYL
Sbjct: 397 SCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKTAETYL 456
Query: 374 HRVGRAGRFGTKGLAITFVS 393
HRVGR+GRFG GLA+ ++
Sbjct: 457 HRVGRSGRFGHLGLAVNLIT 476
>gi|310659566|ref|YP_003937287.1| ATP-dependent RNA helicase; cold shock [[Clostridium] sticklandii]
gi|308826344|emb|CBH22382.1| ATP-dependent RNA helicase; cold shock [[Clostridium] sticklandii]
Length = 515
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 136/347 (39%), Positives = 208/347 (59%), Gaps = 6/347 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F + L+ ELL+A++D GF+ P+ +Q + IP A+ G+D+I QA++G GKTA F + L +
Sbjct: 4 FNELGLQEELLKAVLDMGFDSPTPIQEQIIPLAMQGIDLIGQAQTGTGKTAAFGIPLLSK 63
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNI-KIHKDLLKNEC 166
E V AL+L TRELA Q+ E R + Y +++ YGG +I K + L KN
Sbjct: 64 IEKGNKAVQALILAPTRELALQVSQEINRLAKY-KNVEAIAIYGGEDIGKQIRGLKKN-- 120
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
PQIVV TPGR + R ++L N++ ILDE D+ML S+ D++ I + P ++Q +
Sbjct: 121 PQIVVATPGRFMDHMRRNTINLANIQTVILDEADEML-SMGFIEDIETILQEVPSERQTL 179
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT+ K I+ V +KFM+ P + V ++ +T+ + Q Y+ L E +K L L+D
Sbjct: 180 LFSATMPKRIQSVSQKFMKSPQTVAVKNKT-MTVDTIEQRYLDLKERDKFDALCRLMDIH 238
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
+IF ++ R EL++ L + IH M QE R + FK G+ +ILVATD
Sbjct: 239 CPELSIIFGRTKRRVDELSEALSIRGYDVEGIHGDMKQERREKVLRRFKRGSIKILVATD 298
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
+ RG+DI V+ V N+D+P ++Y+HR+GR GR G KG++ TFV+
Sbjct: 299 VAARGLDISGVSHVFNFDLPQDPESYVHRIGRTGRAGQKGISFTFVT 345
>gi|254566021|ref|XP_002490121.1| Cytoplasmic DExD/H-box helicase [Komagataella pastoris GS115]
gi|238029917|emb|CAY67840.1| Cytoplasmic DExD/H-box helicase [Komagataella pastoris GS115]
gi|328350520|emb|CCA36920.1| ATP-dependent RNA helicase DDX6/DHH1 [Komagataella pastoris CBS
7435]
Length = 472
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 149/396 (37%), Positives = 221/396 (55%), Gaps = 29/396 (7%)
Query: 7 NEYEDEL-LDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSG 65
+E++ EL L + Q D + TK N F F LK ELL I ++G
Sbjct: 2 SEWKKELNLPQRDSRPQTDDVLNTKGNS--------------FESFHLKRELLMGIFEAG 47
Query: 66 FEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRE 125
FE PS +Q E IP A+ G D++ +AK+G GKTA FV+ +LQ+ +P ++ +L+L TRE
Sbjct: 48 FEKPSPIQEESIPIALTGRDILARAKNGTGKTASFVIPSLQKIKPKMNKIQSLILVPTRE 107
Query: 126 LAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDK 184
LA Q + +L ++V V GG ++ D+++ N+ ++VGTPGRIL LA K
Sbjct: 108 LALQTSQVVKTLGKHL-GVQVMVSTGGTLLR--DDIIRLNDPVHVLVGTPGRILDLASRK 164
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTP-------HDKQVMMFSATLSKEIR 237
+ FI+DE DKML S + R +++I P + Q ++FSAT ++
Sbjct: 165 LAEFDQCKTFIMDEADKML-SREFRNVIEQIITFFPSRLPGGANAYQSLLFSATFPLTVK 223
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 297
K + P EI + DE LTL G+ Q+Y + E +K LN L L NQ +IF S
Sbjct: 224 SFMDKHLYKPYEINLMDE--LTLKGITQYYAFVEEKQKLHCLNTLFSKLQINQSIIFCNS 281
Query: 298 VSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERV 357
R L+K L + ++ H+ M Q R + F++G+ R LV +DL+ RGIDI+ V
Sbjct: 282 TKRVELLSKKLTDLDYSCYYSHARMPQASRNKVFHEFRQGHVRNLVCSDLLTRGIDIQAV 341
Query: 358 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
N+VIN+D P +A+TYLHR+GR+GRFG G+AI ++
Sbjct: 342 NVVINFDFPKNAETYLHRIGRSGRFGHFGIAINLIN 377
>gi|237755972|ref|ZP_04584559.1| ATP-dependent RNA helicase DbpA [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237691876|gb|EEP60897.1| ATP-dependent RNA helicase DbpA [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 405
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 130/355 (36%), Positives = 212/355 (59%), Gaps = 2/355 (0%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F+D L E L+++ + G+ P+E+Q + IP + G D++ QA++G GKTA F + +++
Sbjct: 8 FKDLNLSKETLKSLDELGYSKPTEIQEKAIPAVMTGKDLVAQAQTGTGKTAAFGVPIVEK 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
P +V AL+L TRELA Q+ E + +AV YGG +I + LK
Sbjct: 68 VNPKQKKVQALILVPTRELAIQVAKEIKELGKNKKVYTLAV-YGGKSISHQINFLKKGSD 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
+VVGTPGR+ L L+L NV+ F+LDE D+MLE + D++EI P D+Q+++
Sbjct: 127 VVVVGTPGRVRDLLERGVLNLDNVKMFVLDEADRMLE-MGFIDDIEEIMSYLPEDRQILL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ KEI + ++F+ + E ++T+ + Q +++ +K +KL ++L +
Sbjct: 186 FSATMPKEILELAEEFLNENYETIKVKPDEVTVEKIKQIIYRVNPRDKFKKLTEVLSQNE 245
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
+V+IF ++ A EL + L E F + IH SQ++R T F+ G +ILVATD+
Sbjct: 246 AEKVIIFTQTKIEADELAERLNEEGFNASAIHGDFSQKKRETVLHNFRTGKLKILVATDV 305
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILN 402
RG+DI+ V++VINY +P A++Y+HR+GR GR G +G AI+ ++S+ D + N
Sbjct: 306 AARGLDIKGVDLVINYGLPRDAESYIHRIGRTGRAGREGTAISIMTSSEDKQLQN 360
>gi|212534920|ref|XP_002147616.1| eukaryotic translation initiation factor eIF-4A subunit, putative
[Talaromyces marneffei ATCC 18224]
gi|212534922|ref|XP_002147617.1| eukaryotic translation initiation factor eIF-4A subunit, putative
[Talaromyces marneffei ATCC 18224]
gi|242791505|ref|XP_002481771.1| eukaryotic translation initiation factor eIF-4A subunit, putative
[Talaromyces stipitatus ATCC 10500]
gi|210070015|gb|EEA24105.1| eukaryotic translation initiation factor eIF-4A subunit, putative
[Talaromyces marneffei ATCC 18224]
gi|210070016|gb|EEA24106.1| eukaryotic translation initiation factor eIF-4A subunit, putative
[Talaromyces marneffei ATCC 18224]
gi|218718359|gb|EED17779.1| eukaryotic translation initiation factor eIF-4A subunit, putative
[Talaromyces stipitatus ATCC 10500]
Length = 399
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 140/349 (40%), Positives = 205/349 (58%), Gaps = 7/349 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK LLR I G+E PS VQ I Q G D I QA+SG GKTA F +S LQ
Sbjct: 27 FEDMHLKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISILQV 86
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ + ALVL TRELA QI Y+ +++ GG N+ +D+ K E
Sbjct: 87 IDTVVRETQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVG--EDIRKLEYG 143
Query: 168 Q-IVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
Q +V GTPGR+ + R + L +N++ +LDE D++L R + ++++ P QV+
Sbjct: 144 QHVVSGTPGRVADMIRRRHLRTRNIKMLVLDEADELLNR-GFREQIYDVYRYLPPATQVV 202
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDA 285
+ SATL ++ + KFM DP+ I V + +LTL GL Q++I + + E K L DL D
Sbjct: 203 VVSATLPYDVLDMTTKFMTDPVRILVKRD-ELTLEGLKQYFIAVEKEEWKFDTLCDLYDT 261
Query: 286 LDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVAT 345
L Q VIF + + L + E NF +H M Q+ER + + F++GN R+L++T
Sbjct: 262 LTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLIST 321
Query: 346 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSS 394
D+ RGID+++V++VINYD+P + + Y+HR+GR+GRFG KG+AI FV+S
Sbjct: 322 DVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTS 370
>gi|302653126|ref|XP_003018394.1| hypothetical protein TRV_07588 [Trichophyton verrucosum HKI 0517]
gi|291182037|gb|EFE37749.1| hypothetical protein TRV_07588 [Trichophyton verrucosum HKI 0517]
Length = 530
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 153/412 (37%), Positives = 224/412 (54%), Gaps = 44/412 (10%)
Query: 6 DNEYEDEL-LDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDS 64
DN+++++L + ++ Q D ATK G+ F DF +K +L+ I ++
Sbjct: 20 DNKWKEQLKIPAKDTRVQTEDVTATK-----------GLE---FEDFYIKRDLMMGIFEA 65
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++T P + AL+L TR
Sbjct: 66 GFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERTNPKIAKTQALILVPTR 125
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARD 183
ELA Q + +L I V V GG ++ D+++ N+ I+VGTPGRIL LA
Sbjct: 126 ELALQTSQVCKTLGKHL-GINVMVTTGGTGLQ--DDIIRLNDTVHIIVGTPGRILDLASK 182
Query: 184 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRP----- 238
L F++DE DK+L S + ++++ P D+QVM+FSAT ++
Sbjct: 183 GVADLSECTTFVMDEADKLL-SPEFTPVIEQLLTFHPKDRQVMLFSATFPIIVKTFKVRY 241
Query: 239 ------VC-----------KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLND 281
C K M++P EI + DE LTL G+ Q+Y + E +K LN
Sbjct: 242 TSIFFITCGNQLILIHIFQDKHMRNPYEINLMDE--LTLRGITQYYAFVEERQKVHCLNT 299
Query: 282 LLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRI 341
L L NQ +IF S +R L K + E + H+ M Q R + F+ G R
Sbjct: 300 LFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHARMLQHNRNRVFHDFRNGVCRN 359
Query: 342 LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
LV +DL+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 360 LVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLIN 411
>gi|242791510|ref|XP_002481772.1| eukaryotic translation initiation factor eIF-4A subunit, putative
[Talaromyces stipitatus ATCC 10500]
gi|218718360|gb|EED17780.1| eukaryotic translation initiation factor eIF-4A subunit, putative
[Talaromyces stipitatus ATCC 10500]
Length = 387
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 140/349 (40%), Positives = 205/349 (58%), Gaps = 7/349 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK LLR I G+E PS VQ I Q G D I QA+SG GKTA F +S LQ
Sbjct: 15 FEDMHLKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISILQV 74
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ + ALVL TRELA QI Y+ +++ GG N+ +D+ K E
Sbjct: 75 IDTVVRETQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVG--EDIRKLEYG 131
Query: 168 Q-IVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
Q +V GTPGR+ + R + L +N++ +LDE D++L R + ++++ P QV+
Sbjct: 132 QHVVSGTPGRVADMIRRRHLRTRNIKMLVLDEADELLNR-GFREQIYDVYRYLPPATQVV 190
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDA 285
+ SATL ++ + KFM DP+ I V + +LTL GL Q++I + + E K L DL D
Sbjct: 191 VVSATLPYDVLDMTTKFMTDPVRILVKRD-ELTLEGLKQYFIAVEKEEWKFDTLCDLYDT 249
Query: 286 LDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVAT 345
L Q VIF + + L + E NF +H M Q+ER + + F++GN R+L++T
Sbjct: 250 LTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLIST 309
Query: 346 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSS 394
D+ RGID+++V++VINYD+P + + Y+HR+GR+GRFG KG+AI FV+S
Sbjct: 310 DVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTS 358
>gi|56756857|gb|AAW26600.1| SJCHGC06283 protein [Schistosoma japonicum]
Length = 402
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 141/363 (38%), Positives = 210/363 (57%), Gaps = 8/363 (2%)
Query: 47 GFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQ 106
F L+ +LLR I GFE PS +Q I Q I G DVI QA+SG GKTA +S LQ
Sbjct: 30 SFDSMCLRDDLLRGIYAYGFERPSAIQQRAIKQIIKGRDVIAQAQSGTGKTATLGISILQ 89
Query: 107 QTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNEC 166
+ + ALVL TRELA QI Y ++ YGG NI +D+ K +
Sbjct: 90 MLDTQLRETQALVLSPTRELASQIQKVILALGDY-TNVHCHACYGGTNI--GEDIRKLDY 146
Query: 167 PQ-IVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQV 225
Q ++ GTPGR+ + R + L + V+ F+LDE D+ML+ + + ++++ P QV
Sbjct: 147 GQHVISGTPGRVFDMIRRRSLRTRAVKLFVLDEADEMLDK-GFKEQIYDVYRYLPPGTQV 205
Query: 226 MMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLD 284
++ SAT+ EI + KFM +P+ I V + +LTL G+ Q ++ + E K L DL D
Sbjct: 206 VLLSATMPHEILEMTSKFMTNPVRILVKRD-ELTLEGIKQFFVAVEREEWKFDTLCDLYD 264
Query: 285 ALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVA 344
L Q VIF + + A L + +++ NF +H M Q+ER K F+ G+ R+L+
Sbjct: 265 TLTVTQSVIFCNTKRKVAWLTEKMLKNNFTVASMHGDMVQKEREKIMKDFRAGDSRVLIT 324
Query: 345 TDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
TDL RGID+++V++VINYD+P++ + Y+HR+GR+GRFG KG+AI FV + D IL +
Sbjct: 325 TDLWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKT-DDIKILRDI 383
Query: 405 SKF 407
++
Sbjct: 384 EQY 386
>gi|326498121|dbj|BAJ94923.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326527983|dbj|BAJ89043.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 495
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 143/380 (37%), Positives = 213/380 (56%), Gaps = 13/380 (3%)
Query: 15 DYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQH 74
D++ + P + A KG + F D+ LK ELL I + GFE PS +Q
Sbjct: 96 DWKAQLKLPPPDTRYQTEDVTATKG------NEFEDYFLKRELLMGIYEKGFERPSPIQE 149
Query: 75 ECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEF 134
E IP A+ G D++ +AK+G GKTA F + L++ + + + ++L TRELA Q
Sbjct: 150 ESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDKNAIQVVILVPTRELALQTSQVC 209
Query: 135 ERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKNVRH 193
+ +L I+V V GG ++K D+++ P ++VGTPGR+L L + LK+
Sbjct: 210 KELGKHL-KIQVMVTTGGTSLK--DDIVRLYQPVHLIVGTPGRVLDLTKKGICILKDCSM 266
Query: 194 FILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVD 253
I+DE DK+L S + + V+++ + P +Q++MFSAT ++ K++ P I +
Sbjct: 267 LIMDEADKLL-SPEFQPSVEQLIRYLPSSRQILMFSATFPVTVKAFKDKYLPKPYVINLM 325
Query: 254 DEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNF 313
DE LTL G+ Q Y + E +K LN L L NQ +IF SV+R L K + E +
Sbjct: 326 DE--LTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGY 383
Query: 314 PSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYL 373
IH+ M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+D P +A+TYL
Sbjct: 384 SCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYL 443
Query: 374 HRVGRAGRFGTKGLAITFVS 393
HRVGR+GRFG GLA+ ++
Sbjct: 444 HRVGRSGRFGHLGLAVNLIT 463
>gi|356504668|ref|XP_003521117.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 8-like [Glycine max]
Length = 499
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 146/390 (37%), Positives = 219/390 (56%), Gaps = 18/390 (4%)
Query: 10 EDELLDYEEEDAQA-----PDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDS 64
+ E +D +D +A P K A KG + F D+ LK ELL I +
Sbjct: 90 QSEAVDSSSQDWKARLKIPPADTRYKTEDVTATKG------NEFEDYFLKRELLMGIYEK 143
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFE PS +Q E IP A+ G D++ +AK+G GKTA F + L++ + + + ++L TR
Sbjct: 144 GFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTR 203
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARD 183
ELA Q + + +L I+V V GG ++K D+++ P ++VGTPGRIL LA+
Sbjct: 204 ELALQTSQVCKELAKHL-KIQVMVTTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLAKK 260
Query: 184 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF 243
LK+ ++DE DK+L S + + ++++ P +Q++MFSAT ++ ++
Sbjct: 261 GVCILKDCAMLVMDEADKLL-SPEFQPSIEQLIHCLPTTRQILMFSATFPVTVKDFKDRY 319
Query: 244 MQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAE 303
++ P I + DE LTL G+ Q Y + E +K LN L L NQ +IF SV+R
Sbjct: 320 LRKPYVINLMDE--LTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVEL 377
Query: 304 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 363
L K + E + IH+ M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+
Sbjct: 378 LAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINF 437
Query: 364 DMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
D P +A+TYLHRVGR+GRFG GLA+ ++
Sbjct: 438 DFPKNAETYLHRVGRSGRFGHLGLAVNLIT 467
>gi|357507229|ref|XP_003623903.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355498918|gb|AES80121.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 516
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 142/380 (37%), Positives = 216/380 (56%), Gaps = 13/380 (3%)
Query: 15 DYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQH 74
D++E+ P + A KG + F D+ LK ELL I + GFE PS +Q
Sbjct: 117 DWKEKLKLPPADTRYRTEDVTATKG------NEFEDYFLKRELLMGIYEKGFERPSPIQE 170
Query: 75 ECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEF 134
E IP A+ G D++ +AK+G GKTA F + L++ + + + ++L TRELA Q
Sbjct: 171 ESIPIALTGSDILARAKNGTGKTAAFSIPALEKIDQDNNIIQVVILVPTRELALQTSQVC 230
Query: 135 ERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKNVRH 193
+ +L I+V V GG ++K D+++ P ++VGTPGRIL LA+ LK+
Sbjct: 231 KELGKHL-QIQVMVTTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSM 287
Query: 194 FILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVD 253
++DE DK+L S + + ++++ + P +Q++MFSAT ++ ++++ P I +
Sbjct: 288 LVMDEADKLL-SPEFQPSIEQLIQFLPPTRQILMFSATFPVTVKDFKDRYLRKPYIINLM 346
Query: 254 DEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNF 313
DE LTL G+ Q Y + E +K LN L L NQ +IF SV+R L K + E +
Sbjct: 347 DE--LTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGY 404
Query: 314 PSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYL 373
IH+ M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+D P +++TYL
Sbjct: 405 SCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYL 464
Query: 374 HRVGRAGRFGTKGLAITFVS 393
HRVGR+GRFG GLA+ ++
Sbjct: 465 HRVGRSGRFGHLGLAVNLIT 484
>gi|219113631|ref|XP_002186399.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209583249|gb|ACI65869.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 414
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 138/356 (38%), Positives = 207/356 (58%), Gaps = 6/356 (1%)
Query: 53 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNP 112
L ELLR I GFE PS +Q I IL D+I QA+SG GKTA F + TL + +P
Sbjct: 48 LPEELLRGIFSYGFEKPSAIQQRAIKPTILAKDLIAQAQSGTGKTATFAIGTLARLDPKL 107
Query: 113 GQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVG 172
+ AL+L TRELA QI Y+ DI+V GG ++ L+ +VVG
Sbjct: 108 RECQALILAPTRELAQQIQKVVLALGDYM-DIQVHACVGGTAVRDDIRTLQAGV-HVVVG 165
Query: 173 TPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATL 232
TPGR+ + + L L ++R F LDE D+ML S + + +IFK P QV +FSAT+
Sbjct: 166 TPGRVFDMINRRALRLDSIRQFFLDEADEML-SRGFKDQIYDIFKFLPETVQVCLFSATM 224
Query: 233 SKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL-SELEKNRKLNDLLDALDFNQV 291
++ V ++FM++P+ I V + +LTL G+ Q YI + E K L DL + L Q
Sbjct: 225 PLDVLEVTERFMREPVRILVKKD-ELTLEGIKQFYISVDKEDWKLETLCDLYETLTITQA 283
Query: 292 VIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRG 351
+I+ + + L + + + +F C+H M Q ER + F+ G+ R+L+ TDL+ RG
Sbjct: 284 IIYCNTRRKVDWLQEEMQKRDFTVSCMHGDMDQRERDIIMREFRSGSSRVLITTDLLARG 343
Query: 352 IDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
ID+++V++VIN+D+P + + Y+HR+GR+GRFG KG+AI F++ A D L + +F
Sbjct: 344 IDVQQVSLVINFDLPTNRENYIHRIGRSGRFGRKGVAINFLTEA-DVRYLRDIEQF 398
>gi|302496500|ref|XP_003010251.1| hypothetical protein ARB_03506 [Arthroderma benhamiae CBS 112371]
gi|291173793|gb|EFE29611.1| hypothetical protein ARB_03506 [Arthroderma benhamiae CBS 112371]
Length = 449
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 138/335 (41%), Positives = 197/335 (58%), Gaps = 7/335 (2%)
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++T P + AL+
Sbjct: 2 GIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERTNPKIAKTQALI 61
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRIL 178
L TRELA Q + +L I V V GG ++ D+++ N+ I+VGTPGRIL
Sbjct: 62 LVPTRELALQTSQVCKTLGKHL-GINVMVTTGGTGLQ--DDIIRLNDTVHIIVGTPGRIL 118
Query: 179 ALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRP 238
LA L F++DE DK+L S + ++++ P D+QVM+FSAT ++
Sbjct: 119 DLASKGVADLSECTTFVMDEADKLL-SPEFTPVIEQLLTFHPKDRQVMLFSATFPIIVKT 177
Query: 239 VCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSV 298
K M++P EI + DE LTL G+ Q+Y + E +K LN L L NQ +IF S
Sbjct: 178 FKDKHMRNPYEINLMDE--LTLRGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNST 235
Query: 299 SRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVN 358
+R L K + E + H+ M Q R + F+ G R LV +DL+ RGIDI+ VN
Sbjct: 236 NRVELLAKKITELGYSCFYSHARMLQHNRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVN 295
Query: 359 IVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 296 VVINFDFPKNAETYLHRIGRSGRFGHLGLAINLIN 330
>gi|3775993|emb|CAA09199.1| RNA helicase [Arabidopsis thaliana]
Length = 505
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 147/391 (37%), Positives = 219/391 (56%), Gaps = 20/391 (5%)
Query: 10 EDELLDYEEEDAQA------PDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVD 63
+ E++D ED +A PD+ + A K + F D+ LK ELL I +
Sbjct: 96 QSEVIDPNSEDWKARLKLPAPDTRYRTEDVTATK-------GNEFEDYFLKRELLMGIYE 148
Query: 64 SGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHT 123
GFE PS +Q E IP A+ G D++ +AK+G GKTA F + L++ + + + A+++ T
Sbjct: 149 KGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLEKIDQDNNVIQAVIIVPT 208
Query: 124 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALAR 182
RELA Q + +L I+V V GG ++K D+++ P ++VGTPGRIL L +
Sbjct: 209 RELALQTSQVCKELGKHL-KIQVMVTTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLTK 265
Query: 183 DKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKK 242
LK+ ++DE DK+L S + + V+ + P +Q++MFSAT ++ +
Sbjct: 266 KGVCVLKDCSVLVMDEADKLL-SQEFQPSVEHLISFLPESRQILMFSATFPVTVKDFKDR 324
Query: 243 FMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAA 302
F+ +P I + DE LTL G+ Q Y + E +K LN L L NQ +IF SV+R
Sbjct: 325 FLTNPYVINLMDE--LTLKGITQFYAFVEERQKIHCLNTLFSKLQINQSIIFCNSVNRVE 382
Query: 303 ELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVIN 362
L K + E + IH+ M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN
Sbjct: 383 LLAKKITELGYSCSYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVIN 442
Query: 363 YDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
+D P +A+TYLHRVGR+GRFG GLA+ ++
Sbjct: 443 FDFPKNAETYLHRVGRSGRFGHLGLAVNLIT 473
>gi|449432163|ref|XP_004133869.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 8-like [Cucumis
sativus]
gi|449480172|ref|XP_004155819.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 8-like [Cucumis
sativus]
Length = 492
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 145/390 (37%), Positives = 218/390 (55%), Gaps = 18/390 (4%)
Query: 10 EDELLDYEEEDAQA-----PDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDS 64
+ E +D +D +A P K A KG + F D+ LK ELL I +
Sbjct: 83 QSEAVDSSSQDWKARLKIPPPDTRYKTEDVTATKG------NEFEDYFLKRELLMGIYEK 136
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFE PS +Q E IP A+ G D++ +AK+G GKTA F + L++ + + + ++L TR
Sbjct: 137 GFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTR 196
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARD 183
ELA Q + L +I+V V GG ++K D+++ P ++VGTPGRIL LA+
Sbjct: 197 ELALQTSQVCKELGKNL-NIQVMVTTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLAKK 253
Query: 184 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF 243
LK+ I+DE DK+L S + + ++ + + P ++Q++M+SAT ++ ++
Sbjct: 254 GVCVLKDCSMLIMDEADKLL-SPEFQPSIEHLIRFLPTNRQILMYSATFPVTVKDFKDRY 312
Query: 244 MQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAE 303
+ P I + DE LTL G+ Q Y + E +K LN L L NQ +IF SV+R
Sbjct: 313 LHKPYVINLMDE--LTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVEL 370
Query: 304 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 363
L K + E + IH+ M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+
Sbjct: 371 LAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINF 430
Query: 364 DMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
D P +++TYLHRVGR+GRFG GLA+ ++
Sbjct: 431 DFPKNSETYLHRVGRSGRFGHLGLAVNLIT 460
>gi|126654509|ref|XP_001388425.1| ATP-dependent RNA helicase [Cryptosporidium parvum Iowa II]
gi|126117365|gb|EAZ51465.1| ATP-dependent RNA helicase, putative [Cryptosporidium parvum Iowa
II]
Length = 406
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 136/349 (38%), Positives = 207/349 (59%), Gaps = 7/349 (2%)
Query: 46 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTL 105
S F D+ LK ELL I + GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ L
Sbjct: 33 SDFEDYFLKRELLMGIYEKGFERPSPIQEESIPVALAGKDILARAKNGTGKTAAFVIPLL 92
Query: 106 QQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE 165
++ + L+L TRELA Q ++ ++ +++ V GG +++ D+L+
Sbjct: 93 EKINTKKNIIQGLILVPTRELALQTSSIVKQLGKHI-NVQCMVSTGGTSLR--DDILRLN 149
Query: 166 CP-QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQ 224
P ++VGTPGRIL L+ K +L FI+DE DK+L S + + ++E+ + P ++Q
Sbjct: 150 NPVHVLVGTPGRILDLSNKKVCNLSGCFMFIMDEADKLL-SPEFQPIIEELIEFLPKERQ 208
Query: 225 VMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLD 284
++++SAT ++ K++ + EI + DE LTL G+ Q+Y + E +K LN L
Sbjct: 209 ILLYSATFPVTVKGFKDKYLANAHEINLMDE--LTLKGVTQYYAFVEEKQKLHCLNTLFS 266
Query: 285 ALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVA 344
L NQ +IF SV+R L K + E IH+ M Q R + F+ G R LV+
Sbjct: 267 KLQINQAIIFCNSVTRVELLAKKITELGSSCFYIHARMLQSHRNRVFHDFRNGACRCLVS 326
Query: 345 TDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
+DL+ RGIDI+ VN+VIN+D P ++TYLHR+GR+GRFG GLAI ++
Sbjct: 327 SDLITRGIDIQSVNVVINFDFPKYSETYLHRIGRSGRFGHLGLAINLIT 375
>gi|297745244|emb|CBI40324.3| unnamed protein product [Vitis vinifera]
Length = 472
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 143/390 (36%), Positives = 220/390 (56%), Gaps = 18/390 (4%)
Query: 10 EDELLDYEEEDAQA-----PDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDS 64
+ E +D +D +A P + A KG + F D+ LK ELL I +
Sbjct: 63 QSEAVDSSSQDWKARLKIPPPDTRYRTEDVTATKG------NEFEDYFLKRELLMGIYEK 116
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFE PS +Q E IP A+ G D++ +AK+G GKTA F + L++ + + + ++L TR
Sbjct: 117 GFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTR 176
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARD 183
ELA Q + +L I+V V GG ++K D+++ P ++VGTPGRIL L++
Sbjct: 177 ELALQTSQVCKELGKHL-KIQVMVTTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLSKK 233
Query: 184 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF 243
LK+ ++DE DK+L S + + ++++ P ++Q+++FSAT ++ ++
Sbjct: 234 GVCILKDCSMLVMDEADKLL-SPEFQPSIEQLIHFMPLNRQILLFSATFPVTVKDFKDRY 292
Query: 244 MQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAE 303
+Q P I + DE LTL G+ Q+Y + E +K LN L L NQ +IF SV+R
Sbjct: 293 LQKPYIINLMDE--LTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVEL 350
Query: 304 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 363
L K + E + IH+ M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+
Sbjct: 351 LAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINF 410
Query: 364 DMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
D P +++TYLHRVGR+GRFG GLA+ ++
Sbjct: 411 DFPKNSETYLHRVGRSGRFGHLGLAVNLIT 440
>gi|339247931|ref|XP_003375599.1| eukaryotic initiation factor 4A [Trichinella spiralis]
gi|316971006|gb|EFV54849.1| eukaryotic initiation factor 4A [Trichinella spiralis]
Length = 465
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 150/413 (36%), Positives = 229/413 (55%), Gaps = 24/413 (5%)
Query: 3 ETRDNEYEDELLDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIV 62
ET +NE E+ A +++A++ N E V + F L+ ELLR +
Sbjct: 53 ETNNNEQR-------EDGRHAAENLASQHNLETNYTEMV----NSFEKMGLREELLRGVF 101
Query: 63 DSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCH 122
GFE PS +Q I DVI QA+SG GKTA F + LQQ + ALV+
Sbjct: 102 AYGFEKPSVIQQLAIVPCCQRRDVIAQAQSGTGKTATFAIGLLQQINTDFNDCQALVMAP 161
Query: 123 TRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALAR 182
TRELA QI ++ +KV GG ++ +++ L C + VGTPGR+L + R
Sbjct: 162 TRELAQQIQKVILALGDHM-GVKVLTCIGGTSVATNREKLGQGC-HVAVGTPGRVLDMIR 219
Query: 183 DKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKK 242
L K ++ F+LDE D+ML S ++ + E+F+ P D QV++ SAT+ E+ V K
Sbjct: 220 GHHLQTKGIKTFVLDEADEML-SRGFKQQIHEVFEFMPADVQVVLLSATMPDEVLQVTTK 278
Query: 243 FMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRA 301
FM +P+ I V E +LTL G+ Q YI++ E K L D+ L ++ VIF S +
Sbjct: 279 FMNNPVRILVRKE-ELTLDGIRQFYIEVGREEWKLDTLCDIYTTLSISKAVIFCNSRQKV 337
Query: 302 AELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVI 361
+L + L + F C+H M+Q++R + F+ G+ R+L++TDL+ RGIDI++V+IVI
Sbjct: 338 EKLARELTDRKFTVTCMHGDMTQQDRDVIMQQFRTGSSRVLISTDLLARGIDIQQVSIVI 397
Query: 362 NYDMPDSADTYLHR-------VGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
NYD+P + + Y+HR +GR+GRFG G+AI FV+ +D ++ + +F
Sbjct: 398 NYDIPHNRENYIHRYEQPAVFIGRSGRFGRVGVAINFVTE-NDKRMMKDIEEF 449
>gi|146313234|ref|YP_001178308.1| ATP-dependent RNA helicase DeaD [Enterobacter sp. 638]
gi|145320110|gb|ABP62257.1| ATP-dependent RNA helicase CsdA [Enterobacter sp. 638]
Length = 655
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 131/365 (35%), Positives = 202/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L L
Sbjct: 8 FADLGLKAPILEALTDLGYEKPSPIQAECIPHLLSGRDVLGMAQTGSGKTAAFSLPLLNN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 IDPELRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L ++ +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLKGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM+DP E+ + T + Q + + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKDPQEVRIQSSVT-TRPDISQTFWSVHGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQSLREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERI 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|116493289|ref|YP_805024.1| superfamily II DNA/RNA helicase [Pediococcus pentosaceus ATCC
25745]
gi|116103439|gb|ABJ68582.1| Superfamily II DNA and RNA helicase [Pediococcus pentosaceus ATCC
25745]
Length = 526
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 133/347 (38%), Positives = 208/347 (59%), Gaps = 4/347 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F + L ++L+A++D+G++ P+ +Q E IP + G D+I QA++G GKTA F L LQ
Sbjct: 3 FTELGLDEDILKAVLDNGYDEPTPIQAETIPGVLEGKDIIGQAQTGTGKTAAFGLPILQN 62
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ + + A+++ TRELA Q E + Y KV V YGG +I+ + LK+ P
Sbjct: 63 VDLDNPNIQAIIISPTRELAAQTQAEIFKLGKY-KKAKVQVVYGGSDIRRQINALKSH-P 120
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L K + L +V+ +LDE D ML+ + D++ I + TP ++Q ++
Sbjct: 121 QIVVGTPGRLLDHIGRKTIRLDHVKTLVLDEADDMLD-MGFLPDIEHIIEQTPSERQTLL 179
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ I+ + KFM DP +I V + +LT + Q+Y++ E EK L +LD
Sbjct: 180 FSATMPAPIKKIGVKFMTDPKQITVKSK-ELTADLVDQYYVRSKEFEKFDILTRVLDVQA 238
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
VIF ++ R E++K LV + + IH ++Q+ R++ + F+EG ILVATD+
Sbjct: 239 PKLAVIFGRTKRRVDEVSKGLVTRGYNAAGIHGDLTQQRRMSILRQFREGQLDILVATDV 298
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSS 394
RG+DI V V NYD+P ++Y+HR+GR GR G G ++TFV++
Sbjct: 299 AARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGATGTSVTFVTN 345
>gi|378727128|gb|EHY53587.1| ATP-dependent RNA helicase fal1 [Exophiala dermatitidis NIH/UT8656]
Length = 400
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 138/349 (39%), Positives = 206/349 (59%), Gaps = 7/349 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK LLR I G+E PS VQ I Q G D I QA+SG GKTA F +S LQ
Sbjct: 28 FEDMHLKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFAISILQV 87
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ + + ALVL TRELA QI Y+ +++ GG N+ +D+ K +
Sbjct: 88 IDTSVRETQALVLSPTRELATQIQSVIMALGDYM-NVQCHACIGGTNVG--EDIRKLDYG 144
Query: 168 Q-IVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
Q +V GTPGR+ + R ++L ++++ +LDE D++L R + ++++ P QV+
Sbjct: 145 QHVVSGTPGRVADMIRRRNLRTRHIKMLVLDEADELLNR-GFREQIYDVYRYLPPATQVV 203
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDA 285
+ SATL ++ + KFM DP+ I V + +LTL GL Q++I + + E K L DL D
Sbjct: 204 VVSATLPYDVLDMTTKFMTDPVRILVKRD-ELTLEGLKQYFIAVEKEEWKFDTLCDLYDT 262
Query: 286 LDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVAT 345
L Q VIF + + L + E NF +H M Q+ER + F++GN R+L++T
Sbjct: 263 LTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMSDFRQGNSRVLIST 322
Query: 346 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSS 394
D+ RGID+++V++VINYD+P + + Y+HR+GR+GRFG KG+AI FV+S
Sbjct: 323 DVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTS 371
>gi|377809005|ref|YP_005004226.1| DEAD/DEAH box helicase [Pediococcus claussenii ATCC BAA-344]
gi|361055746|gb|AEV94550.1| DEAD/DEAH box helicase family protein [Pediococcus claussenii ATCC
BAA-344]
Length = 518
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 133/347 (38%), Positives = 208/347 (59%), Gaps = 4/347 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F + L ++L+A++D+G+E P+ +Q E IP + G D+I QA++G GKTA F L LQ
Sbjct: 3 FTELGLDDDVLKAVIDNGYEEPTPIQAETIPDVLAGKDIIGQAQTGTGKTAAFGLPILQH 62
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ N + A+++ TRELA Q E + Y KV V YGG +I+ + LK+ P
Sbjct: 63 VDLNNPNIQAIIVSPTRELAAQTQAEIFKLGKY-KKAKVQVVYGGADIRRQINSLKSH-P 120
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L K + L +V +LDE D ML+ + D+++I + TP+D+Q ++
Sbjct: 121 QIVVGTPGRLLDHIGRKTIRLDHVNTLVLDEADDMLD-MGFLPDIEQIIEKTPNDRQTLL 179
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + I+ + KFM DP ++ V + +LT + Q+Y++ E EK L +LD
Sbjct: 180 FSATMPQAIKKIGVKFMHDPKQVTVKSK-ELTADLVDQYYVRSKEFEKFDILTRVLDVQA 238
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
VIF ++ R E++K LV + + IH ++Q+ R++ F+ G+ ILVATD+
Sbjct: 239 PKLAVIFGRTKRRVDEVSKGLVARGYNAAGIHGDLTQQRRMSILHQFRNGDLDILVATDV 298
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSS 394
RG+DI V V NYD+ ++Y+HR+GR GR G G ++TFV++
Sbjct: 299 AARGLDITGVTHVYNYDITQDPESYVHRIGRTGRAGAHGTSVTFVTN 345
>gi|440799644|gb|ELR20688.1| Eukaryotic initiation factor 4A, putative [Acanthamoeba castellanii
str. Neff]
Length = 412
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 140/372 (37%), Positives = 205/372 (55%), Gaps = 14/372 (3%)
Query: 32 NGEAAKKGYVGIHSS---------GFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAIL 82
GE + GY + + F L+ ELLR I GFE PS +Q I
Sbjct: 16 GGERSGAGYTATYETVESDVEPIGDFDSMGLRDELLRGIYAYGFEKPSAIQQRAIVPLSQ 75
Query: 83 GMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLP 142
G D+I QA+SG GKTA F + LQQ + AL++ TRELA Q+ + ++
Sbjct: 76 GKDIIAQAQSGTGKTATFGIGILQQIDLAGKDAQALIVVPTRELAQQVHRVIQALGAHM- 134
Query: 143 DIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKM 202
+IK + GG + + +L++ +VVGTPGRI + +L + +R F+LDE D+M
Sbjct: 135 NIKAHILTGGTRVDDDRRILRDGV-HVVVGTPGRIFDMITRGELIAERIRTFVLDEADEM 193
Query: 203 LESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHG 262
L S +++IFK PH QV +FSATL E + K+FM +P+ I V E +LTL G
Sbjct: 194 L-SKGFEEIIRDIFKTLPHSVQVGIFSATLPPECLDITKRFMNNPVNILVKQE-ELTLQG 251
Query: 263 LVQHYIKLS-ELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSG 321
+ Q Y+ E K L DL + ++ Q VIF + + L + + NF H
Sbjct: 252 INQFYVNCEREQWKYETLCDLYNDINITQAVIFCNARRKVDWLTERMTRDNFTVSATHGS 311
Query: 322 MSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 381
+ ER + F+ G+ R+L+ TDL+ RGID+++V++VINYD+P S + YLHR+GR+GR
Sbjct: 312 VDPSERKKIMEEFRTGSSRVLITTDLLARGIDVQQVSVVINYDLPRSKENYLHRIGRSGR 371
Query: 382 FGTKGLAITFVS 393
FG KGLA+ FV+
Sbjct: 372 FGRKGLALNFVT 383
>gi|418239853|ref|ZP_12866397.1| ATP-dependent RNA helicase DeaD [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|351780679|gb|EHB22744.1| ATP-dependent RNA helicase DeaD [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
Length = 657
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 131/372 (35%), Positives = 206/372 (55%), Gaps = 4/372 (1%)
Query: 46 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTL 105
+ F D L +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F LS L
Sbjct: 7 TSFADLGLSAPILSALTDLGYEKPSPIQLECIPHLLNGRDVLGMAQTGSGKTAAFGLSLL 66
Query: 106 QQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE 165
+P+ LVL TRELA Q+ FS ++ + V YGG + L+ +
Sbjct: 67 HNIDPSLKAPQVLVLAPTRELAIQVAEALSSFSKHMNGVNVVALYGGQRYDVQLRALR-Q 125
Query: 166 CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQV 225
PQ+VVGTPGR+L + L+L N+ +LDE D+ML + DV+ I P + Q
Sbjct: 126 GPQVVVGTPGRLLDHLKRGTLNLSNLSGLVLDEADEMLR-MGFIEDVENILAQIPAEHQT 184
Query: 226 MMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDA 285
+FSAT+ + IR + ++FM++P E+ + + T + Q Y + + KN L L+A
Sbjct: 185 ALFSATMPEAIRRITRRFMKEPQEVRIQS-SMTTRPDISQSYWVVDGVRKNDALVRFLEA 243
Query: 286 LDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVAT 345
DF+ +IFV++ + E+ + L + S ++ M+Q R + K G IL+AT
Sbjct: 244 EDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQAAREQTLERLKNGRLDILIAT 303
Query: 346 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVS 405
D+ RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + +L +
Sbjct: 304 DVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVDR-RERRLLQNIE 362
Query: 406 KFMFLLIGSFQC 417
+ M + I Q
Sbjct: 363 RTMKMTIPPVQL 374
>gi|225454138|ref|XP_002270379.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 8 [Vitis vinifera]
gi|147785187|emb|CAN75439.1| hypothetical protein VITISV_000835 [Vitis vinifera]
Length = 491
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 143/390 (36%), Positives = 220/390 (56%), Gaps = 18/390 (4%)
Query: 10 EDELLDYEEEDAQA-----PDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDS 64
+ E +D +D +A P + A KG + F D+ LK ELL I +
Sbjct: 82 QSEAVDSSSQDWKARLKIPPPDTRYRTEDVTATKG------NEFEDYFLKRELLMGIYEK 135
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFE PS +Q E IP A+ G D++ +AK+G GKTA F + L++ + + + ++L TR
Sbjct: 136 GFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTR 195
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARD 183
ELA Q + +L I+V V GG ++K D+++ P ++VGTPGRIL L++
Sbjct: 196 ELALQTSQVCKELGKHL-KIQVMVTTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLSKK 252
Query: 184 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF 243
LK+ ++DE DK+L S + + ++++ P ++Q+++FSAT ++ ++
Sbjct: 253 GVCILKDCSMLVMDEADKLL-SPEFQPSIEQLIHFMPLNRQILLFSATFPVTVKDFKDRY 311
Query: 244 MQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAE 303
+Q P I + DE LTL G+ Q+Y + E +K LN L L NQ +IF SV+R
Sbjct: 312 LQKPYIINLMDE--LTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVEL 369
Query: 304 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 363
L K + E + IH+ M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+
Sbjct: 370 LAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINF 429
Query: 364 DMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
D P +++TYLHRVGR+GRFG GLA+ ++
Sbjct: 430 DFPKNSETYLHRVGRSGRFGHLGLAVNLIT 459
>gi|357164928|ref|XP_003580213.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 6-like [Brachypodium
distachyon]
Length = 495
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 143/380 (37%), Positives = 212/380 (55%), Gaps = 13/380 (3%)
Query: 15 DYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQH 74
D++ + P + A KG + F D+ LK ELL I + GFE PS +Q
Sbjct: 96 DWKTQLKLPPPDTRYQTEDVTATKG------NEFEDYFLKRELLMGIYEKGFERPSPIQE 149
Query: 75 ECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEF 134
E IP A+ G D++ +AK+G GKTA F + L++ + + + +L TRELA Q
Sbjct: 150 ESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDKNAIQVAILVPTRELALQTSQVC 209
Query: 135 ERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKNVRH 193
+ +L I+V V GG ++K D+++ P ++VGTPGR+L L + LK+
Sbjct: 210 KELGKHL-KIQVMVTTGGTSLK--DDIIRLHQPVHLLVGTPGRVLDLTKKGICILKDCSM 266
Query: 194 FILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVD 253
I+DE DK+L S + + V+++ + P +Q++MFSAT ++ K++ P I +
Sbjct: 267 LIMDEADKLL-SPEFQPSVEQLIRYLPMSRQILMFSATFPVTVKAFKDKYLPKPYVINLM 325
Query: 254 DEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNF 313
DE LTL G+ Q Y + E +K LN L L NQ +IF SV+R L K + E +
Sbjct: 326 DE--LTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGY 383
Query: 314 PSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYL 373
IH+ M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+D P +A+TYL
Sbjct: 384 SCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYL 443
Query: 374 HRVGRAGRFGTKGLAITFVS 393
HRVGR+GRFG GLA+ ++
Sbjct: 444 HRVGRSGRFGHLGLAVNLIT 463
>gi|356504657|ref|XP_003521112.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 8-like [Glycine max]
Length = 502
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 145/390 (37%), Positives = 218/390 (55%), Gaps = 18/390 (4%)
Query: 10 EDELLDYEEEDAQA-----PDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDS 64
+ E +D +D +A P + A KG + F D+ LK ELL I +
Sbjct: 93 QSEPMDSSSQDWKARLKIPPADTRYRTEDVTATKG------NEFEDYFLKRELLMGIYEK 146
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFE PS +Q E IP A+ G D++ +AK+G GKTA F + L++ + + + ++L TR
Sbjct: 147 GFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTR 206
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARD 183
ELA Q + +L I+V V GG ++K D+++ P ++VGTPGRIL LA+
Sbjct: 207 ELALQTSQVCKELGKHL-KIQVMVTTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLAKK 263
Query: 184 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF 243
LK+ ++DE DK+L S + + ++++ P +Q++MFSAT ++ ++
Sbjct: 264 GVCILKDCAMLVMDEADKLL-SPEFQPSIEQLIHFLPTTRQILMFSATFPVTVKDFKDRY 322
Query: 244 MQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAE 303
++ P I + DE LTL G+ Q Y + E +K LN L L NQ +IF SV+R
Sbjct: 323 LRKPYVINLMDE--LTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVEL 380
Query: 304 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 363
L K + E + IH+ M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+
Sbjct: 381 LAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINF 440
Query: 364 DMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
D P +A+TYLHRVGR+GRFG GLA+ ++
Sbjct: 441 DFPKNAETYLHRVGRSGRFGHLGLAVNLIT 470
>gi|227509297|ref|ZP_03939346.1| ATP-dependent RNA helicase [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
gi|227512309|ref|ZP_03942358.1| ATP-dependent RNA helicase [Lactobacillus buchneri ATCC 11577]
gi|227084484|gb|EEI19796.1| ATP-dependent RNA helicase [Lactobacillus buchneri ATCC 11577]
gi|227191227|gb|EEI71294.1| ATP-dependent RNA helicase [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
Length = 502
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 141/360 (39%), Positives = 207/360 (57%), Gaps = 5/360 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F + L LL AI SGFE + +Q E IP + G DVI QA++G GKTA F L LQ
Sbjct: 3 FSELGLSDSLLSAISSSGFEEATPIQAETIPMVLNGEDVIGQAQTGTGKTAAFALPILQH 62
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ N V AL++ TRELA Q E R KV V YGG +I+ + LK+ P
Sbjct: 63 LDFNNPNVQALIISPTRELAIQTQEEVYRLGKD-EKAKVQVVYGGADIRRQINSLKSH-P 120
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QI+VGTPGRIL L L++V+ +LDE D+ML ++ D++ I K TP D+Q ++
Sbjct: 121 QIIVGTPGRILDHISRHTLKLEHVKTLVLDEADEML-NMGFLDDIESIIKQTPSDRQTLL 179
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ +I+ V +FM+DP ++ + + +LT + Q+Y+++ E EK + D D
Sbjct: 180 FSATMPPQIKRVGVQFMKDPHQVKIKAK-ELTTDLIDQYYVRVKEYEKFDTMTRFFDVQD 238
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
++F ++ R E++K L + + +H ++Q R FK+G ILVATD+
Sbjct: 239 PEVTIVFCRTKRRVDEVSKGLEARGYNAAGLHGDLTQARRTQIMNEFKQGKVDILVATDV 298
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RGIDI V V NYD+P D Y+HRVGR GR G G++ITF ++ ++ D L+++ K
Sbjct: 299 AARGIDISGVTHVYNYDIPQDPDGYVHRVGRTGRAGKHGVSITF-TTPNEMDYLHEIEKL 357
>gi|357507227|ref|XP_003623902.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355498917|gb|AES80120.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 586
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 136/347 (39%), Positives = 206/347 (59%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D+ LK ELL I + GFE PS +Q E IP A+ G D++ +AK+G GKTA F + L++
Sbjct: 214 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFSIPALEK 273
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ + + ++L TRELA Q + +L I+V V GG ++K D+++ P
Sbjct: 274 IDQDKNVIQVVILVPTRELALQTSQVCKELGKHL-QIQVMVTTGGTSLK--DDIMRLYQP 330
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
++VGTPGRIL LA+ LK+ ++DE DK+L S + + ++++ + P ++Q++
Sbjct: 331 VHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLL-SPEFKPSIEQLIQFLPSNRQIL 389
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ ++++ P I + DE LTL G+ Q Y + E +K LN L L
Sbjct: 390 LFSATFPVTVKDFNDRYLRKPYIINLMDE--LTLKGITQFYAFVEERQKVHCLNTLFSKL 447
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF SV+R L K + E + IH+ M Q+ R + F+ G R LV TD
Sbjct: 448 QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTD 507
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L RGIDI+ VN+VIN+D P +++TYLHRVGR+GRFG GLA+ V+
Sbjct: 508 LFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLVT 554
>gi|422015367|ref|ZP_16361966.1| ATP-dependent RNA helicase DeaD [Providencia burhodogranariea DSM
19968]
gi|414099532|gb|EKT61173.1| ATP-dependent RNA helicase DeaD [Providencia burhodogranariea DSM
19968]
Length = 653
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 134/366 (36%), Positives = 206/366 (56%), Gaps = 6/366 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D L +L A+ D G+E PS +Q +CIP + G DV+ A++G GKTA F L L
Sbjct: 9 FADLGLSASILTALNDLGYEKPSPIQKQCIPLLLDGNDVLGMAQTGSGKTAAFGLPLLHN 68
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P+ LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 69 IDPDLKAPQILVLAPTRELAVQVAEAMSDFSKHMSRVNVVALYGGQRYDVQLRALR-QGP 127
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
Q+VVGTPGR+L + L L ++ +LDE D+ML + DV+ I P Q +
Sbjct: 128 QVVVGTPGRLLDHLKRGTLDLSKLKGLVLDEADEMLR-MGFIEDVENIMSQIPAQHQTAL 186
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH-GLVQHYIKLSELEKNRKLNDLLDAL 286
FSAT+ + IR + ++FM+DP EI + +A +T + Q Y +S + KN L L+A
Sbjct: 187 FSATMPEPIRRITRRFMKDPKEIRI--QASITTRPDITQSYWTVSGMRKNEALVRFLEAE 244
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
DF+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD
Sbjct: 245 DFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATD 304
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
+ RG+D+ER+++V+NYD+P A++Y+HR+GR GR G G A+ FV + + +L V +
Sbjct: 305 VAARGLDVERISLVVNYDIPMDAESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNVER 363
Query: 407 FMFLLI 412
M L I
Sbjct: 364 TMKLTI 369
>gi|336388485|gb|EGO29629.1| hypothetical protein SERLADRAFT_354128 [Serpula lacrymans var.
lacrymans S7.9]
Length = 488
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 138/347 (39%), Positives = 205/347 (59%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D L+ ELL I ++GFE PS +Q E IP A+ D++ +AK+G GKTA FV+ +LQQ
Sbjct: 48 FEDMYLRRELLMGIFEAGFEKPSPIQEEAIPTALTKRDILARAKNGTGKTAAFVIPSLQQ 107
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
+ + ++ AL+L TRELA Q + ++ ++V V GG +K D+++ +E
Sbjct: 108 IDTSRNKIQALLLVPTRELALQTSQVCKILGKHM-GVQVMVTTGGTTLK--DDIMRLSET 164
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
++VGTPGRIL LA L F++DE DK+L S + ++++ P ++QVM
Sbjct: 165 VHVLVGTPGRILDLAGKNVADLSECPVFVMDEADKLL-SPEFTPVMEQLLSFLPEERQVM 223
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K+M+ P EI + +E LTL G+ Q+Y + E +K LN L L
Sbjct: 224 LFSATFPMIVKDFKDKYMKSPYEINLMEE--LTLRGVTQYYAYVEERQKVHCLNTLFSKL 281
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q R + F+ G R LV +D
Sbjct: 282 QINQSIIFCNSTNRVELLAKKVTELGYSCFYSHAKMLQSHRNRVFHDFRNGVCRNLVCSD 341
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +++TYLHR+GR+GRFG GLAI V+
Sbjct: 342 LLTRGIDIQAVNVVINFDFPKNSETYLHRIGRSGRFGHLGLAINLVT 388
>gi|209876956|ref|XP_002139920.1| ATP-dependent RNA helicase [Cryptosporidium muris RN66]
gi|209555526|gb|EEA05571.1| ATP-dependent RNA helicase, putative [Cryptosporidium muris RN66]
Length = 406
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 136/349 (38%), Positives = 206/349 (59%), Gaps = 7/349 (2%)
Query: 46 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTL 105
S F D+ LK ELL I + GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ L
Sbjct: 33 SDFEDYFLKRELLMGIYEKGFERPSPIQEESIPVALAGKDILARAKNGTGKTAAFVIPLL 92
Query: 106 QQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE 165
++ + L+L TRELA Q ++ ++ ++ V GG +++ D+L+
Sbjct: 93 EKINTKKNTIQGLILVPTRELALQTSSIVKQLGKHI-SVQCMVSTGGTSLR--DDILRLN 149
Query: 166 CP-QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQ 224
P ++VGTPGR+L LA K +L FI+DE DK+L S + + ++E+ + P ++Q
Sbjct: 150 NPVHVLVGTPGRVLDLANKKVCNLSGCFMFIMDEADKLL-SPEFQPIIEELIEFLPKERQ 208
Query: 225 VMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLD 284
++++SAT ++ K++ + EI + DE LTL G+ Q+Y + E +K LN L
Sbjct: 209 ILLYSATFPVTVKGFKDKYLSNAHEINLMDE--LTLKGVTQYYAFVEEKQKLHCLNTLFC 266
Query: 285 ALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVA 344
L NQ +IF SV+R L K + E IH+ M Q R + F+ G R LV+
Sbjct: 267 KLQINQAIIFCNSVARVELLAKKITELGSSCFYIHARMLQSHRNRVFHDFRNGACRCLVS 326
Query: 345 TDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
+DL+ RGIDI+ VN+VIN+D P ++TYLHR+GR+GRFG GLAI ++
Sbjct: 327 SDLITRGIDIQSVNVVINFDFPKYSETYLHRIGRSGRFGHLGLAINLIT 375
>gi|379710610|ref|YP_005265815.1| ATP-dependent RNA helicase [Nocardia cyriacigeorgica GUH-2]
gi|374848109|emb|CCF65181.1| ATP-dependent RNA helicase [Nocardia cyriacigeorgica GUH-2]
Length = 591
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 128/346 (36%), Positives = 197/346 (56%), Gaps = 3/346 (0%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D + +LRAI D G+E PS +Q IP + G DV+ A++G GKTA F + L
Sbjct: 21 FADLGIDDRILRAIADVGYESPSPIQAATIPPLLAGADVVGLAQTGTGKTAAFAIPILMG 80
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
EP ALVL TRELA Q+ F R++T++P + V YGG + + L+
Sbjct: 81 LEPTGKAPRALVLAPTRELAIQVAEAFGRYATHIPGLHVLPIYGGQSYGVQLSGLRRGA- 139
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
+VVGTPGR++ L L +++ +LDE D+ML+ + + DV+ I TP DKQV +
Sbjct: 140 HVVVGTPGRVIDHLEKGTLDLSQLQYLVLDEADEMLK-MGFQEDVERILADTPADKQVAL 198
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ IR + K+++ DP+EI V + T + Q ++++S K L +L+
Sbjct: 199 FSATMPAAIRKISKQYLHDPVEITVKAKTS-TNTNITQRWVQVSHQRKLDALTRILEVES 257
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F ++IFV++ EL + L F + I+ ++Q +R K G ILVATD+
Sbjct: 258 FEAMIIFVRTKQATEELAEKLRARGFSAAAINGDIAQAQRERTIGQLKAGTLDILVATDV 317
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
RG+D++R++ V+NYD+P ++Y+HR+GR GR G G A+ FV+
Sbjct: 318 AARGLDVDRISHVVNYDIPHDTESYVHRIGRTGRAGRSGEALLFVA 363
>gi|294634522|ref|ZP_06713057.1| ATP-dependent RNA helicase DeaD [Edwardsiella tarda ATCC 23685]
gi|291092036|gb|EFE24597.1| ATP-dependent RNA helicase DeaD [Edwardsiella tarda ATCC 23685]
Length = 643
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 134/373 (35%), Positives = 206/373 (55%), Gaps = 4/373 (1%)
Query: 40 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 99
Y+ + F D L ++ A+ D G+E PS +Q CIP + G DV+ A++G GKTA
Sbjct: 5 YMAEFETTFADLGLAAPIIEALNDLGYEKPSPIQAACIPHLLNGRDVLGMAQTGSGKTAA 64
Query: 100 FVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHK 159
F L L +P+ LVL TRELA Q+ FS +L I V YGG +
Sbjct: 65 FSLPLLNNIDPSLKAPQVLVLAPTRELAVQVAEAMTDFSKHLHGINVVALYGGQRYDVQL 124
Query: 160 DLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
L+ + PQIVVGTPGR+L + LSL ++R +LDE D+ML + DV+ I
Sbjct: 125 RALR-QGPQIVVGTPGRLLDHLKRGTLSLASLRGLVLDEADEMLR-MGFIEDVETIMAQI 182
Query: 220 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKL 279
P + Q +FSAT+ + IR + ++FM +P E+ + T + Q Y + + KN L
Sbjct: 183 PAEHQTALFSATMPEAIRRITRRFMNEPQEVRIQSSVT-TRPDISQSYWTVYGMRKNEAL 241
Query: 280 NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNK 339
L+A DF+ +IFV++ + E+ + L + S ++ M+Q R + K+G
Sbjct: 242 VRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYSSAALNGDMNQALREQTLERLKDGRL 301
Query: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSD 399
IL+ATD+ RG+D+ER+++V+NYD+P A++Y+HR+GR GR G G A+ FV + +
Sbjct: 302 DILIATDVAARGLDVERISLVVNYDIPMDAESYVHRIGRTGRAGRAGRALLFVDN-RERR 360
Query: 400 ILNQVSKFMFLLI 412
+L + + M L I
Sbjct: 361 LLRNIERTMKLTI 373
>gi|441523228|ref|ZP_21004858.1| ATP-dependent RNA helicase DeaD [Gordonia sihwensis NBRC 108236]
gi|441457193|dbj|GAC62819.1| ATP-dependent RNA helicase DeaD [Gordonia sihwensis NBRC 108236]
Length = 596
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 134/369 (36%), Positives = 210/369 (56%), Gaps = 9/369 (2%)
Query: 25 DSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGM 84
+S T + AA+K S+ F D + P +L+A+ D G+E PS +Q IP + G
Sbjct: 3 ESENTSSTAPAAEK------STAFGDLGIDPGVLKALDDVGYETPSPIQAATIPPLMEGR 56
Query: 85 DVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDI 144
DV+ A++G GKTA F L L + + + + ALVL TRELA Q+ F +STYLP++
Sbjct: 57 DVVGLAQTGTGKTAAFALPILTRLDTSARKPQALVLAPTRELALQVAEAFGSYSTYLPEV 116
Query: 145 KVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLE 204
KV YGG + I L+ Q++VGTPGR++ L L + +LDE D+ML
Sbjct: 117 KVLPIYGGQSYGIQLSGLRRGA-QVIVGTPGRVIDHLDKGTLDLSQLEFLVLDEADEML- 174
Query: 205 SLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLV 264
++ DV+ I TP KQV +FSAT+ I + +K++ +P E+ V ++ T +
Sbjct: 175 TMGFAEDVERILADTPDQKQVALFSATMPAAIGRLARKYLNNPQEVTVKNKTA-TAQNIT 233
Query: 265 QHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQ 324
Q Y+++S K L +L+ F+ +++FV++ S EL + L ++ I+ M Q
Sbjct: 234 QKYLQVSHQRKLDALTRVLEVEPFDGMIVFVRTKSATEELAEKLRARGLSAMAINGDMVQ 293
Query: 325 EERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGT 384
+R K+G+ ILVATD+ RG+D++R++ V+NYD+P ++Y+HR+GR GR G
Sbjct: 294 AQRERTINQLKDGSLDILVATDVAARGLDVDRISHVVNYDIPHDVESYVHRIGRTGRAGR 353
Query: 385 KGLAITFVS 393
G A+ FVS
Sbjct: 354 SGTALLFVS 362
>gi|392575855|gb|EIW68987.1| hypothetical protein TREMEDRAFT_44243 [Tremella mesenterica DSM
1558]
Length = 552
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 134/354 (37%), Positives = 206/354 (58%), Gaps = 6/354 (1%)
Query: 41 VGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVF 100
+ S F +F L+ ELL I +GFE+PS +Q + IP A+ G D++ +AK+G GKTA F
Sbjct: 31 LATEGSTFENFGLRRELLMGIFTAGFENPSPIQEQSIPLALSGRDILARAKNGTGKTASF 90
Query: 101 VLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKD 160
++ TL + + A++L TRELA Q + ++P+++V V GG ++ D
Sbjct: 91 IIPTLNRINTKANHIQAVLLVPTRELALQTSQVCKTLGAHIPNLQVMVTTGGTTLR--DD 148
Query: 161 LLKNECP-QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
+L+ + P I+VGTPGR+L L +LK F++DE DK+L S + ++++ +
Sbjct: 149 ILRLQEPVHILVGTPGRVLDLGGKGIANLKQCGIFVMDEADKLL-SEEFTPVIEQLLALC 207
Query: 220 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKL 279
P ++Q+M+FSAT ++ + M P EI + DE LTL G+ Q Y + E +K L
Sbjct: 208 PSERQLMLFSATFPWNVKHFSDRHMIQPHEINLMDE--LTLKGVTQFYAYVEERQKVHCL 265
Query: 280 NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNK 339
N L L NQ +IF S R L K + + + H+ M Q R + F+ G
Sbjct: 266 NTLFSKLQINQSIIFCNSTQRVELLAKKITDLGYSCFYSHARMLQAHRNRVFHDFRAGMT 325
Query: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
R LV +DL+ RGIDI+ VN+VIN+D P +A++YLHR+GR+GRFG GLAI+ ++
Sbjct: 326 RNLVCSDLLTRGIDIQAVNVVINFDFPKTAESYLHRIGRSGRFGHLGLAISLLT 379
>gi|356530086|ref|XP_003533615.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 8-like [Glycine max]
Length = 578
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 144/390 (36%), Positives = 219/390 (56%), Gaps = 18/390 (4%)
Query: 10 EDELLDYEEEDAQA-----PDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDS 64
+ E ++ +D +A P K A KG + F D+ LK ELL I +
Sbjct: 169 QSEAINSSSQDWKARLNIPPPDTCHKTEDVTATKG------NEFEDYFLKRELLMGIYEK 222
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
GFE PS +Q ECIP A+ G D++ +AK+G GKTA F + L++ + + + +L TR
Sbjct: 223 GFERPSPIQEECIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNDVIQVAILVPTR 282
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARD 183
ELA Q + +L I+V V GG ++K D+++ P ++VGTPGRIL LA+
Sbjct: 283 ELALQTSQVCKDLGKHL-KIQVMVTTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLAKK 339
Query: 184 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF 243
L + ++DE DK+L S + + ++++ + P ++Q++MFSAT ++ ++
Sbjct: 340 GVCILNDCSMLVMDEADKLL-SQEFQPSIEQLIQFLPGNRQILMFSATFPVTVKDFKDRY 398
Query: 244 MQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAE 303
++ P + + DE LTL G+ Q+Y L E +K LN L L NQ +IF SV+R
Sbjct: 399 LRKPYIVNLMDE--LTLKGITQYYAFLEERQKVHCLNTLFSKLQINQSIIFCNSVNRVEL 456
Query: 304 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 363
L K + E + IH+ M Q+ R + F G R LV TDL RGIDI+ VN+VIN+
Sbjct: 457 LAKKITELGYSCFYIHAKMLQDHRNRVFHDFCNGACRNLVCTDLFTRGIDIQAVNVVINF 516
Query: 364 DMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
D P +++TYLHRVGR+GRFG GLA+ ++
Sbjct: 517 DFPKNSETYLHRVGRSGRFGHLGLAVNLIT 546
>gi|302654809|ref|XP_003019203.1| hypothetical protein TRV_06752 [Trichophyton verrucosum HKI 0517]
gi|291182911|gb|EFE38558.1| hypothetical protein TRV_06752 [Trichophyton verrucosum HKI 0517]
Length = 403
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 145/377 (38%), Positives = 216/377 (57%), Gaps = 10/377 (2%)
Query: 20 DAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQ 79
D QA ++ + +K+ V + F D LK LLR I G+E PS VQ I Q
Sbjct: 6 DRQADENTTERMEFSTSKEVTV---APTFDDMHLKENLLRGIYAYGYESPSAVQSRAIVQ 62
Query: 80 AILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFST 139
G D I QA+SG GKTA F +S LQ + + ALVL TRELA QI
Sbjct: 63 ICKGRDTIAQAQSGTGKTATFSISILQVIDTVLRESQALVLSPTRELATQIQSVVMALGD 122
Query: 140 YLPDIKVAVFYGGVNIKIHKDLLKNECPQ-IVVGTPGRILALARDKDLSLKNVRHFILDE 198
Y+ +++ GG N+ +D+ K E Q +V GTPGR+ + R + L +N++ +LDE
Sbjct: 123 YM-NVQCHACIGGTNVG--EDIRKLEHGQHVVSGTPGRVADMIRRRHLRTRNIKMLVLDE 179
Query: 199 CDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKL 258
D++L R + ++++ P QV++ SATL ++ + KFM DP+ I V + +L
Sbjct: 180 ADELLNR-GFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRILVKRD-EL 237
Query: 259 TLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSIC 317
TL GL Q++I + + E K L DL D L Q VIF + + L + E NF
Sbjct: 238 TLEGLKQYFIAVEKEEWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSS 297
Query: 318 IHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 377
+H M Q+ER + + F++GN R+L++TD+ RGID+++V++VINYD+P + + Y+HR+G
Sbjct: 298 MHGEMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIG 357
Query: 378 RAGRFGTKGLAITFVSS 394
R+GRFG KG+AI FV+S
Sbjct: 358 RSGRFGRKGVAINFVTS 374
>gi|227522395|ref|ZP_03952444.1| DEAD box ATP-dependent RNA helicase SrmB [Lactobacillus hilgardii
ATCC 8290]
gi|227090453|gb|EEI25765.1| DEAD box ATP-dependent RNA helicase SrmB [Lactobacillus hilgardii
ATCC 8290]
Length = 502
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 141/360 (39%), Positives = 207/360 (57%), Gaps = 5/360 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F + L LL AI SGFE + +Q E IP + G DVI QA++G GKTA F L LQ
Sbjct: 3 FSELGLSDSLLSAISSSGFEEATPIQAETIPMVLNGEDVIGQAQTGTGKTAAFALPILQH 62
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ N V AL++ TRELA Q E R KV V YGG +I+ + LK+ P
Sbjct: 63 LDFNNPNVQALIISPTRELAIQTQEEVYRLGKD-EKAKVQVVYGGADIRRQINSLKSH-P 120
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QI+VGTPGRIL L L++V+ +LDE D+ML ++ D++ I K TP D+Q ++
Sbjct: 121 QIIVGTPGRILDHISRHTLKLEHVKTLVLDEADEML-NMGFLDDIESIIKQTPSDRQTLL 179
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ +I+ V +FM+DP ++ + + +LT + Q+Y+++ E EK + D D
Sbjct: 180 FSATMPPQIKRVGVQFMKDPHQVKIKAK-ELTTDLIDQYYVRVKEYEKFDTMTRFFDVQD 238
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
++F ++ R E++K L + + +H ++Q R FK+G ILVATD+
Sbjct: 239 PEVTIVFCRTKRRVDEVSKGLEARGYNAAGLHGDLTQARRTQIMNEFKQGKVDILVATDV 298
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RGIDI V V NYD+P D Y+HRVGR GR G G++ITF ++ ++ D L+++ K
Sbjct: 299 AARGIDISGVTHVYNYDIPQDPDGYVHRVGRTGRAGKHGVSITF-TTPNEMDYLHEIEKL 357
>gi|167535963|ref|XP_001749654.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771802|gb|EDQ85463.1| predicted protein [Monosiga brevicollis MX1]
Length = 400
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 141/357 (39%), Positives = 204/357 (57%), Gaps = 11/357 (3%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F DF LK ELL I + GFE+PS VQ ECIP A++ D++ +AK+G GKT +++ TLQ
Sbjct: 17 FEDFGLKRELLLGIFEKGFENPSPVQEECIPNALMRRDILARAKNGTGKTGAYLIPTLQL 76
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
+P + AL+L TRELA Q + +L ++++ GG N + D+L+ +
Sbjct: 77 VDPALACIQALILVPTRELALQTASIAKELGKHL-NLEIMTTTGGTNTR--DDILRLGQT 133
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML--ESLDMRRDVQEIFKMTPHDKQ 224
+VV T GRIL L + + DE DK+L +SLD VQ+I P +Q
Sbjct: 134 VHVVVATGGRILDLIERGVAQMARCNILVFDEADKLLSEDSLDT---VQKIISHLPEKRQ 190
Query: 225 VMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLD 284
M+ SAT ++ K+++++P I + + LTL G+ Q Y L E +K R LN L
Sbjct: 191 TMLLSATYPVAVQGFTKRYLKNPHVINLME--TLTLKGVTQFYAFLEEKDKVRCLNTLFG 248
Query: 285 ALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVA 344
L NQ +IF S SR L K + + + + IHS M Q R T + F++G R LV
Sbjct: 249 KLQINQSIIFCSSHSRVELLAKKITKLGYSCLYIHSRMEQSHRNTVFDAFRKGKSRHLVC 308
Query: 345 TDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDIL 401
TDL RGIDI+ VN+V+N+D P A+TYLHR+GR+GR+G GLAI V++ + +L
Sbjct: 309 TDLFTRGIDIQAVNVVVNFDFPREAETYLHRIGRSGRYGHLGLAINLVTAGNREALL 365
>gi|108800931|ref|YP_641128.1| DEAD/DEAH box helicase [Mycobacterium sp. MCS]
gi|119870071|ref|YP_940023.1| DEAD/DEAH box helicase [Mycobacterium sp. KMS]
gi|126436556|ref|YP_001072247.1| DEAD/DEAH box helicase [Mycobacterium sp. JLS]
gi|108771350|gb|ABG10072.1| ATP-dependent RNA helicase CsdA [Mycobacterium sp. MCS]
gi|119696160|gb|ABL93233.1| ATP-dependent RNA helicase CsdA [Mycobacterium sp. KMS]
gi|126236356|gb|ABN99756.1| ATP-dependent RNA helicase CsdA [Mycobacterium sp. JLS]
Length = 557
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 131/359 (36%), Positives = 204/359 (56%), Gaps = 5/359 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D + PE+LRA+ D G+E PS +Q IP + G DV+ A++G GKTA F + L +
Sbjct: 15 FADLQIHPEVLRAVTDVGYETPSAIQAATIPAMLAGSDVVGLAQTGTGKTAAFAIPILSK 74
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+PN ALVL TRELA Q+ F R+ +LP + V YGG + LK
Sbjct: 75 IDPNSRATQALVLAPTRELALQVAEAFGRYGAHLP-VNVLPVYGGSSYGPQMAGLKRGA- 132
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
Q+VVGTPGR++ L L ++ + +LDE D+ML+ + DV+ I TP KQV +
Sbjct: 133 QVVVGTPGRVIDHLEKGSLDLSHLDYMVLDEADEMLQ-MGFAEDVERILSDTPEYKQVAL 191
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ I+ + KK++ DP+E+ V + + T + Q YI++S K L LL+
Sbjct: 192 FSATMPPGIKKITKKYLHDPVEVTVKSKTQ-TAENITQRYIQVSYPRKMDALTRLLETEQ 250
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
+ +++FV++ E+ + L F + I+ + Q R K+G+ ILVATD+
Sbjct: 251 GDGMIVFVRTKQATEEVAEKLRARGFAAAAINGDIPQAVRERTISQLKDGSIDILVATDV 310
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
RG+D+ER++ V+N+D+P ++Y+HR+GR GR G G A+ FV+ + +LN + +
Sbjct: 311 AARGLDVERISHVVNFDIPHDPESYVHRIGRTGRAGRSGTALLFVTP-RERHLLNSIER 368
>gi|222423092|dbj|BAH19526.1| AT4G00660 [Arabidopsis thaliana]
Length = 374
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 138/347 (39%), Positives = 203/347 (58%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D+ LK ELL I + GFE PS +Q E IP A+ G D++ +AK+G GKTA F + L++
Sbjct: 2 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLEK 61
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ + + A+++ TRELA Q + +L I+V V GG ++K D+++ P
Sbjct: 62 IDQDNNVIQAVIIVPTRELALQTSQVCKELGKHL-KIQVMVTTGGTSLK--DDIMRLYQP 118
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
++VGTPGRIL L + LK+ ++DE DK+L S + + V+ + P +Q++
Sbjct: 119 VHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLL-SQEFQPSVEHLISFLPESRQIL 177
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
MFSAT ++ +F+ +P I + DE LTL G+ Q Y + E +K LN L L
Sbjct: 178 MFSATFPVTVKDFKDRFLTNPYVINLMDE--LTLKGITQFYAFVEERQKIHCLNTLFSKL 235
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF SV+R L K + E + IH+ M Q+ R + F+ G R LV TD
Sbjct: 236 QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTD 295
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L RGIDI+ VN+VIN+D P +A+TYLHRVGR+GRFG GLA+ ++
Sbjct: 296 LFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLIT 342
>gi|363752737|ref|XP_003646585.1| hypothetical protein Ecym_4755 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890220|gb|AET39768.1| hypothetical protein Ecym_4755 [Eremothecium cymbalariae
DBVPG#7215]
Length = 398
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 134/352 (38%), Positives = 211/352 (59%), Gaps = 7/352 (1%)
Query: 45 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLST 104
S+ F L+ LLR I GFE PS +Q I Q I G DVI QA+SG GKTA F ++
Sbjct: 22 SASFEAMKLQDNLLRGIYSYGFEAPSAIQSRAITQIIKGKDVIAQAQSGTGKTATFTIAM 81
Query: 105 LQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK- 163
LQ + ALVL TRELA QI Y+ + A G + +D+ K
Sbjct: 82 LQIIDMKSKDCQALVLSPTRELAVQISQVVTNLGGYMNVVAHACTGGKA---LQQDINKF 138
Query: 164 NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML-ESLDMRRDVQEIFKMTPHD 222
N+ +V GTPGR+L + + L+ ++++ +LDE D++L +SL ++ + +IF P
Sbjct: 139 NKGCHVVSGTPGRVLDTIKRRALNTRHIKMLVLDEADELLSDSLGFKQQIYDIFTKLPTS 198
Query: 223 KQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLND 281
QV++ SAT+SK++ V KK M DP+++ V + +++L + Q+++ + + E K L D
Sbjct: 199 VQVVLISATISKDVLEVVKKLMTDPVKLLVKRD-QISLDVIKQYHVNVEKEEWKFDTLCD 257
Query: 282 LLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRI 341
L D+L NQ VIF + + L++ L++ NF IH M Q+ER F+ G+ R+
Sbjct: 258 LYDSLTINQCVIFCNTKKKVDWLSRKLLQTNFAVSSIHGDMQQDEREKVMNDFRSGSSRL 317
Query: 342 LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L++TD+ RGID++++++VINYD+P+ + Y+HR+GR+GRFG KG+AI F++
Sbjct: 318 LISTDVWARGIDVQQISLVINYDIPELLENYIHRIGRSGRFGRKGIAINFIT 369
>gi|421893868|ref|ZP_16324361.1| DEAD-box ATP-dependent RNA helicase CshA [Pediococcus pentosaceus
IE-3]
gi|385273353|emb|CCG89733.1| DEAD-box ATP-dependent RNA helicase CshA [Pediococcus pentosaceus
IE-3]
Length = 526
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 133/347 (38%), Positives = 208/347 (59%), Gaps = 4/347 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F + L ++L+A++D+G++ P+ +Q E IP + G D+I QA++G GKTA F L LQ
Sbjct: 3 FTELGLDEDILKAVLDNGYDEPTPIQAETIPGVLEGKDIIGQAQTGTGKTAAFGLPILQN 62
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ + + A+++ TRELA Q E + Y KV V YGG +I+ + LK+ P
Sbjct: 63 VDLDNPNIQAIIISPTRELAAQTQAEIFKLGKY-KKAKVQVVYGGSDIRRQINALKSH-P 120
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L K + L +V+ +LDE D ML+ + D++ I + TP ++Q ++
Sbjct: 121 QIVVGTPGRLLDHIGRKTIRLDHVKTLVLDEADDMLD-MGFLPDIEHIIEQTPSERQTLL 179
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ I+ + KFM DP +I V + +LT + Q+Y++ E EK L +LD
Sbjct: 180 FSATMPAPIKKIGVKFMTDPKQITVKSK-ELTADLVDQYYVRSKEFEKFDILTRVLDVQA 238
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
VIF ++ R E++K LV + + IH ++Q+ R++ + F+EG ILVATD+
Sbjct: 239 PKLAVIFGRTKRRVDEVSKGLVTRGYNAAGIHGDLTQQRRMSILRQFREGQLDILVATDV 298
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSS 394
RG+DI V V NYD+P ++Y+HR+GR GR G G ++TFV++
Sbjct: 299 AARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGATGTSVTFVTN 345
>gi|238506126|ref|XP_002384265.1| DEAD-box RNA helicase Dhh1/Vad1, putative [Aspergillus flavus
NRRL3357]
gi|220690379|gb|EED46729.1| DEAD-box RNA helicase Dhh1/Vad1, putative [Aspergillus flavus
NRRL3357]
Length = 453
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 137/337 (40%), Positives = 198/337 (58%), Gaps = 7/337 (2%)
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA 117
+ I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++ P + A
Sbjct: 1 MMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERINPKSTKTQA 60
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGR 176
L+L TRELA Q H + +L I V V GG + D+++ N+ I+VGTPGR
Sbjct: 61 LILVPTRELALQTSHVCKTLGKHL-GINVMVTTGGTGLM--DDIIRLNDAVHILVGTPGR 117
Query: 177 ILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEI 236
+L LA L F++DE DK+L S + ++++ P D+QVM+FSAT +
Sbjct: 118 VLDLASKGVADLSECPTFVMDEADKLL-SPEFTPVIEQLLSFHPKDRQVMLFSATFPLIV 176
Query: 237 RPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVK 296
+ K M++P EI + DE LTL G+ Q+Y + E +K LN L L NQ +IF
Sbjct: 177 KSFKDKHMRNPYEINLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFSKLQINQSIIFCN 234
Query: 297 SVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIER 356
S +R L K + E + H+ M Q+ R + F+ G R LV +DL+ RGIDI+
Sbjct: 235 STNRVELLAKKITELGYSCFYSHARMLQQHRNRVFHDFRNGVCRNLVCSDLLTRGIDIQA 294
Query: 357 VNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
VN+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 295 VNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLIN 331
>gi|359457850|ref|ZP_09246413.1| DEAD/DEAH box RNA helicase [Acaryochloris sp. CCMEE 5410]
Length = 574
Score = 244 bits (623), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 134/349 (38%), Positives = 199/349 (57%), Gaps = 3/349 (0%)
Query: 46 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTL 105
S F D + P LL+A+ + G+E PS +Q + IP + G D++ QA++G GKTA F L L
Sbjct: 7 SRFADLAIAPPLLQAVEEVGYESPSPIQAQSIPPLLAGRDLLGQAQTGTGKTAAFALPLL 66
Query: 106 QQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE 165
Q + + LVL TRELA Q+ + ++ YLP +A YGG NI L+
Sbjct: 67 SQLDLSQAHPQILVLAPTRELAIQVAEAMQTYARYLPGFHIATLYGGQNISTQLRQLRRG 126
Query: 166 CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQV 225
+VVGTPGR++ L L N+ +LDE D+ML + DV++I TP +QV
Sbjct: 127 V-HVVVGTPGRLIDHLLRGTLKLDNLSTVVLDEADEMLR-MGFIEDVEKILDETPKGRQV 184
Query: 226 MMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDA 285
+FSAT+ IR V ++ + DP+EI + + T+ + Q Y ++ L K L +L+
Sbjct: 185 ALFSATMPSAIRRVAQRHLNDPVEIKIKSKTA-TVSTVTQRYWQVRGLSKLDALTRILEV 243
Query: 286 LDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVAT 345
DF +++FV++ AAEL + L + S + +SQ R + K G I+VAT
Sbjct: 244 EDFEAMLVFVRTKVMAAELAEKLEARGYSSAVLSGDISQPLREKTIERIKAGRLDIIVAT 303
Query: 346 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSS 394
D+ RG+D+ER++ VINYD+P +TY+HR+GR GR G +G AI FVSS
Sbjct: 304 DVAARGLDVERISHVINYDIPYDTETYVHRIGRTGRAGRQGDAILFVSS 352
>gi|373465275|ref|ZP_09556749.1| DEAD-box ATP-dependent RNA helicase CshA [Lactobacillus kisonensis
F0435]
gi|371760939|gb|EHO49597.1| DEAD-box ATP-dependent RNA helicase CshA [Lactobacillus kisonensis
F0435]
Length = 508
Score = 244 bits (623), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 138/360 (38%), Positives = 210/360 (58%), Gaps = 5/360 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F + L LL AI SGFE + +Q E IP + G DVI QA++G GKTA F L LQ+
Sbjct: 3 FSELGLSDRLLSAISSSGFEEATPIQAETIPMVLKGQDVIGQAQTGTGKTAAFGLPILQK 62
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ + V AL++ TRELA Q E R +V V YGG +I+ + LK+ P
Sbjct: 63 IDFDNPNVQALIISPTRELAIQTQEEIYRLGKD-EKARVQVVYGGADIRRQINSLKDH-P 120
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QI+VGTPGR+L R L L++++ +LDE D+ML+ + D++ I K TP ++Q ++
Sbjct: 121 QIIVGTPGRLLDHIRRHTLKLEHIKTLVLDEADEMLD-MGFLDDIESIIKQTPEERQTLL 179
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ +I+ V +FM+DP ++ + + +LT + Q+Y++L E EK + D D
Sbjct: 180 FSATMPAQIKRVGVQFMKDPQQVKIKAK-ELTTDLIDQYYVRLKEYEKFDTMTRFFDVQD 238
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
+++F ++ R E++K L + + +H ++Q R + FK G ILVATD+
Sbjct: 239 PEVILVFCRTKRRVDEVSKGLEARGYKAAGLHGDLTQARRSQIMQEFKHGKIDILVATDV 298
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RGIDI V V NYD+P D+Y+HRVGR GR G G++ITF ++ ++ D L ++ K
Sbjct: 299 AARGIDISGVTHVYNYDIPQDPDSYVHRVGRTGRAGKHGVSITF-ATPNEMDYLREIEKL 357
>gi|149244712|ref|XP_001526899.1| eukaryotic initiation factor 4A-12 [Lodderomyces elongisporus NRRL
YB-4239]
gi|152032453|sp|A5DWJ1.1|FAL1_LODEL RecName: Full=ATP-dependent RNA helicase FAL1
gi|146449293|gb|EDK43549.1| eukaryotic initiation factor 4A-12 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 399
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 142/368 (38%), Positives = 214/368 (58%), Gaps = 7/368 (1%)
Query: 41 VGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVF 100
V +H + F LKPELL+ I GFE PS +Q I Q I G D I QA+SG GKTA F
Sbjct: 22 VKVHRT-FESMRLKPELLKGIYAYGFEAPSAIQSRAIMQIISGRDTIAQAQSGTGKTATF 80
Query: 101 VLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKD 160
+ L+ + + ALVL TRELA QI + + Y+ +I+ GG N+
Sbjct: 81 SIGMLEVLDSKSKECQALVLSPTRELATQIQNVIKHLGDYM-NIQTYACIGGKNVGTDIK 139
Query: 161 LLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTP 220
L+ + QIV GTPGR+L + + ++LS ++++ ILDE D++ + + + EI+K P
Sbjct: 140 RLQ-QGQQIVSGTPGRVLDVIKRRNLSTRHIKMLILDEADELF-TKGFKEQIYEIYKHLP 197
Query: 221 HDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL-SELEKNRKL 279
QV++ SATL+ E+ + KF DP++I V E +++L G+ Q+YI+ E K L
Sbjct: 198 PGVQVVVVSATLTHEVLEMTGKFTTDPVKILVKRE-EVSLSGIKQYYIQCEKEDWKFDTL 256
Query: 280 NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNK 339
DL D L Q VIF + + L + + NF + +H M QEER F+ GN
Sbjct: 257 CDLYDNLTITQAVIFCNTKIKVNWLTDQMRKQNFTVVAMHGDMKQEERDAIMNDFRSGNS 316
Query: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSD 399
R+L++TD+ RGID++++++VINYD+P + Y+HR+GR+GRFG KG AI ++ SD+
Sbjct: 317 RVLISTDVWARGIDVQQISLVINYDLPLDKENYIHRIGRSGRFGRKGTAINLLTK-SDTI 375
Query: 400 ILNQVSKF 407
L + K+
Sbjct: 376 ELKALEKY 383
>gi|401765355|ref|YP_006580362.1| ATP-dependent RNA helicase DeaD [Enterobacter cloacae subsp.
cloacae ENHKU01]
gi|400176889|gb|AFP71738.1| ATP-dependent RNA helicase DeaD [Enterobacter cloacae subsp.
cloacae ENHKU01]
Length = 631
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 133/365 (36%), Positives = 202/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L L
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLSGRDVLGMAQTGSGKTAAFSLPLLNN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P+ LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 IDPDLRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + K+FM+DP E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITKRFMKDPQEVRIQSSVT-TRPDISQSYWSVYGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|226531524|ref|NP_001148960.1| ATP-dependent RNA helicase dhh1 [Zea mays]
gi|195623636|gb|ACG33648.1| ATP-dependent RNA helicase dhh1 [Zea mays]
Length = 517
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 142/380 (37%), Positives = 212/380 (55%), Gaps = 13/380 (3%)
Query: 15 DYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQH 74
D++ + P + A KG + F D+ LK ELL I + GFE PS +Q
Sbjct: 118 DWKTQLKLPPPDTRYRTEDVTATKG------NEFEDYFLKRELLMGIYEKGFERPSPIQE 171
Query: 75 ECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEF 134
E IP A+ G D++ +AK+G GKTA F + L++ + + ++L TRELA Q
Sbjct: 172 ESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQEKNAIQVVILVPTRELALQTSQVC 231
Query: 135 ERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKNVRH 193
+ +L I+V V GG ++K D+++ P ++VGTPGRIL L + LK+
Sbjct: 232 KELGKHL-KIQVMVTTGGTSLK--DDIVRLYQPVHLIVGTPGRILDLTKKGVCILKDCSM 288
Query: 194 FILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVD 253
I+DE DK+L S + + ++++ + P +Q++MFSAT ++ K++ P I +
Sbjct: 289 LIMDEADKLL-SPEFQPSIEQLIRYLPASRQILMFSATFPVTVKEFKDKYLPKPYVINLM 347
Query: 254 DEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNF 313
DE LTL G+ Q Y + E +K LN L L NQ +IF SV+R L K + E +
Sbjct: 348 DE--LTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGY 405
Query: 314 PSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYL 373
IH+ M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+D P +++TYL
Sbjct: 406 SCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYL 465
Query: 374 HRVGRAGRFGTKGLAITFVS 393
HRVGR+GRFG GLA+ ++
Sbjct: 466 HRVGRSGRFGHLGLAVNLIT 485
>gi|160331247|ref|XP_001712331.1| eif4A [Hemiselmis andersenii]
gi|159765778|gb|ABW98006.1| eif4A [Hemiselmis andersenii]
Length = 401
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 143/367 (38%), Positives = 211/367 (57%), Gaps = 5/367 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK E+L+ I GFE PS +Q + I I D+I QA+SG GKTA FV+ TLQ
Sbjct: 24 FSDMGLKKEILQGIFKYGFEKPSLIQQKGILPIIHKKDLIAQAQSGTGKTATFVIGTLQN 83
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ + QV +V+C +RELA QI +E + I+ GG IK + LL ++ P
Sbjct: 84 VQYDVFQVQCMVVCPSRELANQIKIVYESIGKF-TKIRTQECIGGTKIKDDRQLLFSKKP 142
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
I++GTPGR+ + + L + + + ++DE D+M S + + IFK P + ++ +
Sbjct: 143 HIIIGTPGRLFDILSIEKLLSQKLEYLVIDEADEMF-SRGFKVQIFRIFKYLPKECKIGL 201
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDAL 286
FSATL KEI V + F+ DP+ I V E +LTL G+ Q YI + + E K L D+ ++
Sbjct: 202 FSATLPKEILQVIELFISDPVRILVKKE-ELTLEGIKQFYIPIEKEEWKLEALFDIYRSI 260
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
Q +I+V + + L + +F IH M Q ER K F+ G R+L+ TD
Sbjct: 261 KAEQSIIYVNARKKVEWLANKMKLNDFSIAFIHGEMEQSERSETMKNFRFGKFRVLITTD 320
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
L+ RGIDIE+VN VINYD+P ++Y+HR+GR+GRFG KG+AI F+S D D L ++
Sbjct: 321 LLSRGIDIEKVNFVINYDLPQYKESYIHRIGRSGRFGKKGVAINFLSRV-DVDNLREIEA 379
Query: 407 FMFLLIG 413
+ +I
Sbjct: 380 YYSTVIA 386
>gi|365869382|ref|ZP_09408929.1| cold-shock DEAD box protein A-like protein (ATP-dependent RNA
helicase DEAD-like protein) [Mycobacterium massiliense
CCUG 48898 = JCM 15300]
gi|414582556|ref|ZP_11439696.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
5S-1215]
gi|420876743|ref|ZP_15340115.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
5S-0304]
gi|420881759|ref|ZP_15345123.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
5S-0421]
gi|420888066|ref|ZP_15351420.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
5S-0422]
gi|420893793|ref|ZP_15357135.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
5S-0708]
gi|420898622|ref|ZP_15361958.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
5S-0817]
gi|420903935|ref|ZP_15367256.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
5S-1212]
gi|420970934|ref|ZP_15434131.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
5S-0921]
gi|421048242|ref|ZP_15511238.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium massiliense
CCUG 48898 = JCM 15300]
gi|363998839|gb|EHM20045.1| cold-shock DEAD box protein A-like protein (ATP-dependent RNA
helicase DEAD-like protein) [Mycobacterium massiliense
CCUG 48898 = JCM 15300]
gi|392090420|gb|EIU16233.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
5S-0304]
gi|392090814|gb|EIU16625.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
5S-0421]
gi|392092626|gb|EIU18431.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
5S-0422]
gi|392102383|gb|EIU28170.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
5S-0708]
gi|392107863|gb|EIU33645.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
5S-0817]
gi|392109193|gb|EIU34971.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
5S-1212]
gi|392117708|gb|EIU43476.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
5S-1215]
gi|392171906|gb|EIU97579.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
5S-0921]
gi|392242407|gb|EIV67894.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium massiliense
CCUG 48898]
Length = 598
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 128/346 (36%), Positives = 196/346 (56%), Gaps = 3/346 (0%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D + PE+LRA+ D G+E PS +Q IP + G DV+ A++G GKTA F + L +
Sbjct: 25 FADLHIAPEVLRAVSDVGYETPSAIQAATIPPLLAGSDVVGLAQTGTGKTAAFAIPILSK 84
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ ALVL TRELA Q+ F R+ ++P + V YGG + + LK
Sbjct: 85 IDLTSKDTQALVLAPTRELALQVAEAFGRYGAHMPKLNVLPIYGGQSYVVQLAGLKRGA- 143
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
Q+VVGTPGR++ L L ++ + +LDE D+ML ++ DV+ I TP KQV +
Sbjct: 144 QVVVGTPGRVIDHLERGTLDLSHLDYLVLDEADEML-TMGFAEDVERILADTPEYKQVAL 202
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ IR + KK++ DP+EI +D + T + Q +I+++ K L +L+
Sbjct: 203 FSATMPTTIRRLTKKYLHDPVEIKIDAKTS-TAENITQRFIQVAGPRKMDALTRILEVET 261
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F +++FV++ E+ L F + I+ ++Q +R K G ILVATD+
Sbjct: 262 FEAMIVFVRTKQATEEVADKLKARGFAAAAINGDINQSQRERTINALKAGTIDILVATDV 321
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
RG+D+ER++ V+NYD+P ++Y+HR+GR GR G G A+ FVS
Sbjct: 322 AARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGTAVLFVS 367
>gi|327294865|ref|XP_003232128.1| eukaryotic initiation factor 4A-12 [Trichophyton rubrum CBS 118892]
gi|326466073|gb|EGD91526.1| eukaryotic initiation factor 4A-12 [Trichophyton rubrum CBS 118892]
Length = 399
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 141/349 (40%), Positives = 205/349 (58%), Gaps = 7/349 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK LLR I G+E PS VQ I Q G D I QA+SG GKTA F +S LQ
Sbjct: 27 FDDMHLKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISILQV 86
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ + ALVL TRELA QI Y+ +++ GG N+ +D+ K E
Sbjct: 87 IDTVLRESQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVG--EDIRKLEHG 143
Query: 168 Q-IVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
Q +V GTPGR+ + R + L +N++ +LDE D++L R + +I++ P QV+
Sbjct: 144 QHVVSGTPGRVADMIRRRHLRTRNIKMLVLDEADELLNR-GFREQIYDIYRYLPPATQVV 202
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDA 285
+ SATL ++ + KFM DP+ I V + +LTL GL Q++I + + E K L DL D
Sbjct: 203 VVSATLPYDVLDMTTKFMTDPVRILVKRD-ELTLEGLKQYFIAVEKEEWKFDTLCDLYDT 261
Query: 286 LDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVAT 345
L Q VIF + + L + E NF +H M Q+ER + + F++GN R+L++T
Sbjct: 262 LTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLIST 321
Query: 346 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSS 394
D+ RGID+++V++VINYD+P + + Y+HR+GR+GRFG KG+AI FV+S
Sbjct: 322 DVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTS 370
>gi|365972254|ref|YP_004953815.1| cold-shock DEAD box protein A [Enterobacter cloacae EcWSU1]
gi|365751167|gb|AEW75394.1| Cold-shock DEAD box protein A [Enterobacter cloacae EcWSU1]
Length = 642
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 132/373 (35%), Positives = 204/373 (54%), Gaps = 4/373 (1%)
Query: 40 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 99
Y+ + F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA
Sbjct: 8 YMAEFETTFADLGLKAPILEALTDLGYEKPSPIQAECIPHLLSGRDVLGMAQTGSGKTAA 67
Query: 100 FVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHK 159
F L L +P LVL TRELA Q+ FS ++ + V YGG +
Sbjct: 68 FSLPLLHNIDPELRAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQL 127
Query: 160 DLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
L+ + PQIVVGTPGR+L + L L + +LDE D+ML + DV+ I
Sbjct: 128 RALR-QGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQI 185
Query: 220 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKL 279
P Q +FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L
Sbjct: 186 PEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWSVYGMRKNEAL 244
Query: 280 NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNK 339
L+A DF+ +IFV++ + E+ + L + S ++ M+Q R + K+G
Sbjct: 245 VRFLEAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRL 304
Query: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSD 399
IL+ATD+ RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + +
Sbjct: 305 DILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERR 363
Query: 400 ILNQVSKFMFLLI 412
+L + + M L I
Sbjct: 364 LLRNIERTMKLTI 376
>gi|195614632|gb|ACG29146.1| ATP-dependent RNA helicase dhh1 [Zea mays]
Length = 517
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 142/380 (37%), Positives = 212/380 (55%), Gaps = 13/380 (3%)
Query: 15 DYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQH 74
D++ + P + A KG + F D+ LK ELL I + GFE PS +Q
Sbjct: 118 DWKTQLKLPPPDTRYRTEDVTATKG------NEFEDYFLKRELLMGIYEKGFERPSPIQE 171
Query: 75 ECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEF 134
E IP A+ G D++ +AK+G GKTA F + L++ + + ++L TRELA Q
Sbjct: 172 ESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQEKNAIQVVILVPTRELALQTSQVC 231
Query: 135 ERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKNVRH 193
+ +L I+V V GG ++K D+++ P ++VGTPGRIL L + LK+
Sbjct: 232 KELGKHL-KIQVMVTTGGTSLK--DDIVRLYQPVHLIVGTPGRILDLTKKGVCILKDCSM 288
Query: 194 FILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVD 253
I+DE DK+L S + + ++++ + P +Q++MFSAT ++ K++ P I +
Sbjct: 289 LIMDEADKLL-SPEFQPSIEQLIRYLPASRQILMFSATFPVTVKEFKDKYLPKPYVINLM 347
Query: 254 DEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNF 313
DE LTL G+ Q Y + E +K LN L L NQ +IF SV+R L K + E +
Sbjct: 348 DE--LTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGY 405
Query: 314 PSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYL 373
IH+ M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+D P +++TYL
Sbjct: 406 SCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYL 465
Query: 374 HRVGRAGRFGTKGLAITFVS 393
HRVGR+GRFG GLA+ ++
Sbjct: 466 HRVGRSGRFGHLGLAVNLIT 485
>gi|326204124|ref|ZP_08193984.1| DEAD/DEAH box helicase domain protein [Clostridium papyrosolvens
DSM 2782]
gi|325985635|gb|EGD46471.1| DEAD/DEAH box helicase domain protein [Clostridium papyrosolvens
DSM 2782]
Length = 564
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 131/346 (37%), Positives = 199/346 (57%), Gaps = 3/346 (0%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F+D L E+ AI D GFE + +Q + IP + G D+I QA++G GKT F + +++
Sbjct: 6 FKDLTLSDEVQHAIADMGFEEATPIQSQSIPYILEGNDLIGQAQTGTGKTCAFGIPAVEK 65
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ + + LVLC TRELA Q C E Y I++ YGG I LK P
Sbjct: 66 IDSHIDSIQVLVLCPTRELAIQSCEELRNVLKYKDGIRILPVYGGQPIDRQIMALKKR-P 124
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QI++GTPGR++ R K L L++++ +LDE D+ML ++ R D+ I + P D+Q ++
Sbjct: 125 QIIIGTPGRVMDHMRRKTLKLESLKMIVLDEADEML-NMGFREDIDTILEKVPEDRQTIL 183
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ KEI + KK+ +DP+ I + + +LT+ + Q+Y+++ E K L+ L+D D
Sbjct: 184 FSATMPKEILELTKKYQKDPVHIKIAHK-ELTVPSIEQYYLEVKESAKLEVLSRLIDTND 242
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
++F + R EL L F + +H M QE R F++GN IL+ATD+
Sbjct: 243 IKLSLVFCNTKKRVDELTASLQSRGFSAEALHGDMRQEHRDKVMSLFRKGNFDILIATDV 302
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
RGID++ V V NYD+P+ + Y+HR+GR GR G G A TF+S
Sbjct: 303 AARGIDVDDVEAVFNYDLPNDEEYYVHRIGRTGRAGRTGKAFTFIS 348
>gi|169628494|ref|YP_001702143.1| cold-shock DEAD box protein A-like protein [Mycobacterium abscessus
ATCC 19977]
gi|419716620|ref|ZP_14244016.1| cold-shock DEAD box protein A-like protein [Mycobacterium abscessus
M94]
gi|420863361|ref|ZP_15326754.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
4S-0303]
gi|420867758|ref|ZP_15331143.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
4S-0726-RA]
gi|420872190|ref|ZP_15335570.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
4S-0726-RB]
gi|420908973|ref|ZP_15372286.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
6G-0125-R]
gi|420915356|ref|ZP_15378661.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
6G-0125-S]
gi|420919746|ref|ZP_15383044.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
6G-0728-S]
gi|420926243|ref|ZP_15389528.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
6G-1108]
gi|420965711|ref|ZP_15428925.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
3A-0810-R]
gi|420976589|ref|ZP_15439771.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
6G-0212]
gi|420981969|ref|ZP_15445139.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
6G-0728-R]
gi|420986517|ref|ZP_15449678.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
4S-0206]
gi|421006515|ref|ZP_15469630.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
3A-0119-R]
gi|421011836|ref|ZP_15474929.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
3A-0122-R]
gi|421016756|ref|ZP_15479823.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
3A-0122-S]
gi|421022668|ref|ZP_15485716.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
3A-0731]
gi|421028023|ref|ZP_15491060.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
3A-0930-R]
gi|421033882|ref|ZP_15496904.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
3A-0930-S]
gi|421039073|ref|ZP_15502084.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
4S-0116-R]
gi|421042545|ref|ZP_15505550.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
4S-0116-S]
gi|169240461|emb|CAM61489.1| Probable cold-shock DEAD box protein A homolog (ATP-dependent RNA
helicase DEAD homolog) [Mycobacterium abscessus]
gi|382940906|gb|EIC65228.1| cold-shock DEAD box protein A-like protein [Mycobacterium abscessus
M94]
gi|392073161|gb|EIT99001.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
4S-0726-RA]
gi|392073881|gb|EIT99719.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
4S-0303]
gi|392076379|gb|EIU02212.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
4S-0726-RB]
gi|392121347|gb|EIU47112.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
6G-0125-R]
gi|392123040|gb|EIU48802.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
6G-0125-S]
gi|392133751|gb|EIU59493.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
6G-0728-S]
gi|392138651|gb|EIU64384.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
6G-1108]
gi|392170848|gb|EIU96525.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
6G-0212]
gi|392173987|gb|EIU99653.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
6G-0728-R]
gi|392187934|gb|EIV13573.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
4S-0206]
gi|392202267|gb|EIV27864.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
3A-0119-R]
gi|392210240|gb|EIV35810.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
3A-0122-R]
gi|392215365|gb|EIV40913.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
3A-0731]
gi|392215856|gb|EIV41403.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
3A-0122-S]
gi|392227287|gb|EIV52801.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
4S-0116-R]
gi|392230423|gb|EIV55933.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
3A-0930-S]
gi|392231929|gb|EIV57433.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
3A-0930-R]
gi|392241611|gb|EIV67099.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
4S-0116-S]
gi|392257699|gb|EIV83148.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
3A-0810-R]
Length = 598
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 128/346 (36%), Positives = 196/346 (56%), Gaps = 3/346 (0%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D + PE+LRA+ D G+E PS +Q IP + G DV+ A++G GKTA F + L +
Sbjct: 25 FADLHIAPEVLRAVSDVGYETPSAIQAATIPPLLAGSDVVGLAQTGTGKTAAFAIPILSK 84
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ ALVL TRELA Q+ F R+ ++P + V YGG + + LK
Sbjct: 85 IDLTSKDTQALVLAPTRELALQVAEAFGRYGAHMPKLNVLPIYGGQSYVVQLAGLKRGA- 143
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
Q+VVGTPGR++ L L ++ + +LDE D+ML ++ DV+ I TP KQV +
Sbjct: 144 QVVVGTPGRVIDHLERGTLDLSHLDYLVLDEADEML-TMGFAEDVERILADTPEYKQVAL 202
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ IR + KK++ DP+EI +D + T + Q +I+++ K L +L+
Sbjct: 203 FSATMPTTIRRLTKKYLHDPVEIKIDAKTS-TAENITQRFIQVAGPRKMDALTRILEVET 261
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F +++FV++ E+ L F + I+ ++Q +R K G ILVATD+
Sbjct: 262 FEAMIVFVRTKQATEEVADKLKARGFAAAAINGDINQSQRERTINALKAGTIDILVATDV 321
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
RG+D+ER++ V+NYD+P ++Y+HR+GR GR G G A+ FVS
Sbjct: 322 AARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGTAVLFVS 367
>gi|425772423|gb|EKV10824.1| Eukaryotic translation initiation factor eIF-4A subunit, putative
[Penicillium digitatum PHI26]
gi|425775053|gb|EKV13341.1| Eukaryotic translation initiation factor eIF-4A subunit, putative
[Penicillium digitatum Pd1]
Length = 399
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 137/349 (39%), Positives = 207/349 (59%), Gaps = 7/349 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK LLR I G+E PS VQ I Q G D I QA+SG GKTA F +STLQ
Sbjct: 27 FEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFAISTLQI 86
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ + ALVL TRELA QI Y+ +++ GG N+ +D+ K +
Sbjct: 87 IDTVVRETQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVG--EDIRKLDYG 143
Query: 168 Q-IVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
Q +V GTPGR+ + R ++L ++++ +LDE D++L R + ++++ P QV+
Sbjct: 144 QHVVSGTPGRVADMIRRRNLRTRHIKMLVLDEADELLNR-GFREQIYDVYRYLPPATQVV 202
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDA 285
+ SATL ++ + KFM DP+ + V + +LTL G+ Q++I + + E K L DL D
Sbjct: 203 VVSATLPYDVLDMTTKFMTDPVRVLVKRD-ELTLEGIKQYFIAVEKEEWKFDTLCDLYDT 261
Query: 286 LDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVAT 345
L Q VIF + + L + E NF +H M Q+ER + + F++GN R+L++T
Sbjct: 262 LTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLIST 321
Query: 346 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSS 394
D+ RGID+++V++VINYD+P + + Y+HR+GR+GRFG KG+AI FV+S
Sbjct: 322 DVWARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTS 370
>gi|383826631|ref|ZP_09981754.1| cold-shock DEAD-box protein, DeaD [Mycobacterium xenopi RIVM700367]
gi|383332437|gb|EID10918.1| cold-shock DEAD-box protein, DeaD [Mycobacterium xenopi RIVM700367]
Length = 566
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 129/349 (36%), Positives = 195/349 (55%), Gaps = 5/349 (1%)
Query: 46 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTL 105
+ F D + P +LRAI + G+E PS +Q IP + G DV+ A++G GKTA F + L
Sbjct: 13 AAFDDLQIHPSVLRAIAEVGYESPSAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPIL 72
Query: 106 QQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE 165
+ + ALVL TRELA Q+ F R+ +LP + YGG + + L+
Sbjct: 73 SRIDTTSNATQALVLAPTRELALQVSEAFSRYGAHLPRLTALPIYGGASYSVQLAGLRRG 132
Query: 166 CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQV 225
Q+VVGTPGR++ L L V + +LDE D+ML ++ DV+ I TP KQV
Sbjct: 133 A-QVVVGTPGRVIDHLERGTLDLSRVDYLVLDEADEML-AMGFAEDVERILSDTPEYKQV 190
Query: 226 MMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTL-HGLVQHYIKLSELEKNRKLNDLLD 284
+FSAT+ IR + K++ +P+EI V EAK T + Q YI+++ K L +L+
Sbjct: 191 ALFSATMPPAIRAITAKYLHEPLEITV--EAKTTTAENISQRYIQVAGPRKMDALTRVLE 248
Query: 285 ALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVA 344
F +++FV++ E+ + L F + I+ + Q +R K+G ILVA
Sbjct: 249 VEPFEAMIVFVRTKQATEEVAEKLCARGFSAAAINGDIPQTQRERTIAALKDGGLDILVA 308
Query: 345 TDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
TD+ RG+D++RV+ V+NYD+P ++Y+HR+GR GR G G A+ FVS
Sbjct: 309 TDVAARGLDVDRVSHVLNYDIPHDTESYVHRIGRTGRAGRSGTALLFVS 357
>gi|409076942|gb|EKM77310.1| hypothetical protein AGABI1DRAFT_115242 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 500
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 141/347 (40%), Positives = 204/347 (58%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D ++ ELL I ++GFE PS +Q E IP A+ D++ +AK+G GKTA FV+ +LQQ
Sbjct: 41 FEDMSIRRELLMGIFEAGFEKPSPIQEEAIPFALTKRDILARAKNGTGKTAAFVIPSLQQ 100
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
+ N ++ AL+L TRELA Q + ++ I+V V GG +K D+L+ +E
Sbjct: 101 IDINKHKIQALLLVPTRELALQTSQVCKTLGKHM-GIQVMVTTGGTTLK--DDILRLSES 157
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
++VGTPGRIL LA L F++DE DK+L S + ++++ P ++QVM
Sbjct: 158 VHVLVGTPGRILDLAGKGVADLSECPVFVMDEADKLL-SPEFAPVMEQLLSYLPSERQVM 216
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K M+ P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 217 LFSATFPMIVKTFKDKHMRSPYEINLMDE--LTLRGVTQYYAYVEERQKVHCLNTLFSKL 274
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q R + F+ G R LV +D
Sbjct: 275 QINQSIIFCNSTNRVELLAKKVTELGYSCFYSHAKMLQSHRNRVFHDFRNGVCRNLVCSD 334
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +++TYLHR+GR+GRFG GLAI V+
Sbjct: 335 LLTRGIDIQAVNVVINFDFPKNSETYLHRIGRSGRFGHLGLAINLVT 381
>gi|328767833|gb|EGF77881.1| hypothetical protein BATDEDRAFT_20569 [Batrachochytrium
dendrobatidis JAM81]
Length = 422
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 146/389 (37%), Positives = 216/389 (55%), Gaps = 24/389 (6%)
Query: 7 NEYEDEL-LDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSG 65
+E++ +L L ++ Q D ATK N F D+ LK ELL I ++G
Sbjct: 21 DEWKRQLALPEKDTRPQTQDVTATKGNE--------------FEDYFLKRELLMGIFEAG 66
Query: 66 FEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRE 125
FE PS +Q E IP A+ G D++ +AK+G GKTA FV+ L++ + AL+L TRE
Sbjct: 67 FERPSPIQEESIPIALAGRDILARAKNGTGKTAAFVIPVLEKINIQKSHIQALLLVPTRE 126
Query: 126 LAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDK 184
LA Q + ++ +++V V GG +K D+L+ + I+V TPGR+L LA
Sbjct: 127 LALQTSQVCKLLGKHM-NVQVMVSTGGTTLK--DDILRLGQTVHILVATPGRVLDLAGRG 183
Query: 185 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 244
+L + F++DE DK+L S + ++++ +Q+ +FSAT ++ KF+
Sbjct: 184 IANLSQCQTFVMDEADKLL-SPEFAPIIEQLIAFCHKSRQIFLFSATFPMMVKTFKDKFL 242
Query: 245 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 304
Q P EI + DE LTLHG+ Q+Y + E +K LN L L NQ +IF S SR L
Sbjct: 243 QKPYEINLMDE--LTLHGVTQYYAYVEERQKVHCLNTLFSKLQINQSIIFCNSTSRVELL 300
Query: 305 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 364
+ + E + IH+ M Q R + F+ G R LV L+ RGIDI+ VN+VIN+D
Sbjct: 301 ARKITELGYSCFYIHARMMQSHRNRVFHDFRSGKTRHLVY--LLTRGIDIQAVNVVINFD 358
Query: 365 MPDSADTYLHRVGRAGRFGTKGLAITFVS 393
P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 359 FPKNAETYLHRIGRSGRFGHLGLAINLIT 387
>gi|302408591|ref|XP_003002130.1| ATP-dependent RNA helicase FAL1 [Verticillium albo-atrum VaMs.102]
gi|261359051|gb|EEY21479.1| ATP-dependent RNA helicase FAL1 [Verticillium albo-atrum VaMs.102]
Length = 401
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 141/356 (39%), Positives = 208/356 (58%), Gaps = 8/356 (2%)
Query: 41 VGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVF 100
V +H + F LK LLR I G+E PS VQ I Q G D I QA+SG GKTA F
Sbjct: 23 VTVHPT-FESMSLKENLLRGIYAYGYESPSAVQSRAIVQVCKGRDTIAQAQSGTGKTATF 81
Query: 101 VLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKD 160
+S LQ + + ALVL TRELA QI Y+ +++ GG N+ +D
Sbjct: 82 SISMLQVIDTAVRESQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVG--ED 138
Query: 161 LLKNECPQ-IVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
+ K + Q IV GTPGR+ + R +DL ++++ +LDE D++L R + ++++
Sbjct: 139 IRKLDYGQHIVSGTPGRVADMIRRRDLRTRHIKMLVLDEADELLNR-GFREQIYDVYRYL 197
Query: 220 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL-SELEKNRK 278
P QV++ SATL ++ + KFM DP+ I V + +LTL GL Q++I + E K
Sbjct: 198 PPATQVVVVSATLPYDVLDMTTKFMTDPVRILVKRD-ELTLEGLKQYFIAVEKEDWKFDT 256
Query: 279 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGN 338
L DL D L Q VIF + + L + E NF +H M Q+ER + + F++GN
Sbjct: 257 LCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDMPQKERDSIMQDFRQGN 316
Query: 339 KRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSS 394
R+L++TD+ RGID+++V++VINYD+P + + Y+HR+GR+GRFG KG+AI FV+S
Sbjct: 317 SRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTS 372
>gi|397678974|ref|YP_006520509.1| cold-shock DEAD box protein A-like protein [Mycobacterium
massiliense str. GO 06]
gi|418249081|ref|ZP_12875403.1| cold-shock DEAD box protein A-like protein [Mycobacterium abscessus
47J26]
gi|419711589|ref|ZP_14239052.1| cold-shock DEAD box protein A-like protein [Mycobacterium abscessus
M93]
gi|420930546|ref|ZP_15393822.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium massiliense
1S-151-0930]
gi|420936028|ref|ZP_15399297.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium massiliense
1S-152-0914]
gi|420940798|ref|ZP_15404060.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium massiliense
1S-153-0915]
gi|420946105|ref|ZP_15409358.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium massiliense
1S-154-0310]
gi|420951063|ref|ZP_15414309.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium massiliense
2B-0626]
gi|420955234|ref|ZP_15418473.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium massiliense
2B-0107]
gi|420960958|ref|ZP_15424186.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium massiliense
2B-1231]
gi|420991202|ref|ZP_15454354.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium massiliense
2B-0307]
gi|420997038|ref|ZP_15460178.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium massiliense
2B-0912-R]
gi|421001472|ref|ZP_15464602.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium massiliense
2B-0912-S]
gi|353450736|gb|EHB99130.1| cold-shock DEAD box protein A-like protein [Mycobacterium abscessus
47J26]
gi|382938911|gb|EIC63240.1| cold-shock DEAD box protein A-like protein [Mycobacterium abscessus
M93]
gi|392139564|gb|EIU65296.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium massiliense
1S-151-0930]
gi|392141543|gb|EIU67268.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium massiliense
1S-152-0914]
gi|392151585|gb|EIU77293.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium massiliense
1S-153-0915]
gi|392159313|gb|EIU85009.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium massiliense
1S-154-0310]
gi|392160840|gb|EIU86531.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium massiliense
2B-0626]
gi|392189282|gb|EIV14916.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium massiliense
2B-0912-R]
gi|392190213|gb|EIV15845.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium massiliense
2B-0307]
gi|392200290|gb|EIV25896.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium massiliense
2B-0912-S]
gi|392254023|gb|EIV79490.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium massiliense
2B-1231]
gi|392255762|gb|EIV81223.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium massiliense
2B-0107]
gi|395457239|gb|AFN62902.1| Cold-shock DEAD box protein A-like protein [Mycobacterium
massiliense str. GO 06]
Length = 598
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 128/346 (36%), Positives = 196/346 (56%), Gaps = 3/346 (0%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D + PE+LRA+ D G+E PS +Q IP + G DV+ A++G GKTA F + L +
Sbjct: 25 FADLHIAPEVLRAVSDVGYETPSAIQAATIPPLLAGSDVVGLAQTGTGKTAAFAIPILSK 84
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ ALVL TRELA Q+ F R+ ++P + V YGG + + LK
Sbjct: 85 IDLTSKDTQALVLAPTRELALQVAEAFGRYGAHMPKLNVLPIYGGQSYVVQLAGLKRGA- 143
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
Q+VVGTPGR++ L L ++ + +LDE D+ML ++ DV+ I TP KQV +
Sbjct: 144 QVVVGTPGRVIDHLERGTLDLSHLDYLVLDEADEML-TMGFAEDVERILADTPEYKQVAL 202
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ IR + KK++ DP+EI +D + T + Q +I+++ K L +L+
Sbjct: 203 FSATMPTTIRRLTKKYLHDPVEIKIDAKTS-TAENITQRFIQVAGPRKMDALTRILEVET 261
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F +++FV++ E+ L F + I+ ++Q +R K G ILVATD+
Sbjct: 262 FEAMIVFVRTKQATEEVADKLKARGFAAAAINGDINQSQRERTINALKAGTIDILVATDV 321
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
RG+D+ER++ V+NYD+P ++Y+HR+GR GR G G A+ FVS
Sbjct: 322 AARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGTAVLFVS 367
>gi|365847660|ref|ZP_09388144.1| DEAD/DEAH box helicase [Yokenella regensburgei ATCC 43003]
gi|364571911|gb|EHM49481.1| DEAD/DEAH box helicase [Yokenella regensburgei ATCC 43003]
Length = 658
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 203/373 (54%), Gaps = 4/373 (1%)
Query: 40 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 99
Y+ + F D LKP +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA
Sbjct: 16 YMAEFETTFADLGLKPTILEALNDLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKTAA 75
Query: 100 FVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHK 159
F L L +P LVL TRELA Q+ FS ++ + V YGG +
Sbjct: 76 FSLPLLNNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQL 135
Query: 160 DLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
L+ + PQIVVGTPGR+L + L L + +LDE D+ML + DV+ I
Sbjct: 136 RALR-QGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAEI 193
Query: 220 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKL 279
P Q +FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L
Sbjct: 194 PDGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVYGMRKNEAL 252
Query: 280 NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNK 339
L+A DF+ +IFV++ + E+ + L + S ++ M+Q R K+G
Sbjct: 253 VRFLEAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQSLREQTLDRLKDGRL 312
Query: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSD 399
IL+ATD+ RG+D+ER+++V+NYD+P ++Y+HR+GR GR G G A+ FV + +
Sbjct: 313 DILIATDVAARGLDVERISLVVNYDIPMDTESYVHRIGRTGRAGRAGRALLFVEN-RERR 371
Query: 400 ILNQVSKFMFLLI 412
+L + + M L I
Sbjct: 372 LLRNIERLMKLTI 384
>gi|345300965|ref|YP_004830323.1| DEAD/DEAH box helicase [Enterobacter asburiae LF7a]
gi|345094902|gb|AEN66538.1| DEAD/DEAH box helicase domain protein [Enterobacter asburiae LF7a]
Length = 637
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 131/365 (35%), Positives = 202/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L L
Sbjct: 8 FADLGLKAPILEALTDLGYEKPSPIQAECIPHLLSGRDVLGMAQTGSGKTAAFSLPLLNN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P+ LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 IDPDLRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWSVYGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|156052539|ref|XP_001592196.1| eukaryotic initiation factor 4A-12 [Sclerotinia sclerotiorum 1980]
gi|160385735|sp|A7EM88.1|FAL1_SCLS1 RecName: Full=ATP-dependent RNA helicase fal1
gi|154704215|gb|EDO03954.1| eukaryotic initiation factor 4A-12 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 399
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 142/362 (39%), Positives = 212/362 (58%), Gaps = 8/362 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F+D LK LLR I G+E PS VQ I Q G D I QA+SG GKTA F +S LQ
Sbjct: 27 FQDMHLKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISMLQV 86
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ + ALVL TRELA QI Y+ +++ GG N+ +D+ K +
Sbjct: 87 IDTAVRETQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVG--EDIRKLDYG 143
Query: 168 Q-IVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
Q IV GTPGR+ + R ++L ++++ +LDE D++L R + ++++ P QV+
Sbjct: 144 QHIVSGTPGRVADMIRRRNLRTRHIKMLVLDEADELLNR-GFREQIYDVYRYLPPATQVV 202
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDA 285
+ SATL ++ + KFM DP+ I V + +LTL GL Q++I + + E K L DL D
Sbjct: 203 VVSATLPYDVLDMTTKFMTDPVRILVKRD-ELTLEGLKQYFIAVEKEEWKFDTLCDLYDT 261
Query: 286 LDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVAT 345
L Q VIF + + L + E NF +H M Q+ER + + F++GN R+L++T
Sbjct: 262 LTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLIST 321
Query: 346 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVS 405
D+ RGID+++V++VINYD+P + + Y+HR+GR+GRFG KG+AI FV+S D IL +
Sbjct: 322 DVWARGIDVQQVSLVINYDLPVNRENYIHRIGRSGRFGRKGVAINFVTS-EDVRILRDIE 380
Query: 406 KF 407
+
Sbjct: 381 LY 382
>gi|395327349|gb|EJF59749.1| eukaryotic translation initiation factor 4A-like protein
[Dichomitus squalens LYAD-421 SS1]
Length = 498
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 141/347 (40%), Positives = 204/347 (58%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D L+ ELL I ++GFE PS +Q E IP A+ DV+ +AK+G GKTA FV+ +LQQ
Sbjct: 43 FEDMFLRRELLMGIFEAGFERPSPIQEEAIPIALTKRDVLARAKNGTGKTAAFVIPSLQQ 102
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
+ + ++ AL+L TRELA Q + ++ I+V V GG +K D+++ +E
Sbjct: 103 VDVSKNKIQALLLVPTRELALQTAQVCKTLGKHM-GIQVMVTTGGTTLK--DDIIRLSEA 159
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
++VGTPGRIL LA L F++DE DK+L S + ++++ P +QVM
Sbjct: 160 VHVLVGTPGRILDLAGKGVADLSECPVFVMDEADKLL-SPEFAPVMEQLLSYLPKTRQVM 218
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ +K M+ P EI + +E LTL G+ Q+Y + E +K LN L L
Sbjct: 219 LFSATFPMIVKDFKEKHMKSPYEINLMEE--LTLRGVTQYYAYVEERQKVHCLNTLFSKL 276
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q R + F+ G R LV +D
Sbjct: 277 QINQSIIFCNSTNRVELLAKKVTELGYSCFYSHAKMLQSHRNRVFHDFRNGVCRNLVCSD 336
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI V+
Sbjct: 337 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLVT 383
>gi|301022016|ref|ZP_07185959.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 69-1]
gi|300397731|gb|EFJ81269.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 69-1]
Length = 646
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 205/373 (54%), Gaps = 4/373 (1%)
Query: 40 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 99
Y+ + F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA
Sbjct: 17 YMAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAA 76
Query: 100 FVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHK 159
F L LQ +P LVL TRELA Q+ FS ++ + V YGG +
Sbjct: 77 FSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQL 136
Query: 160 DLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
L+ + PQIVVGTPGR+L + L L + +LDE D+ML + DV+ I
Sbjct: 137 RALR-QGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQI 194
Query: 220 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKL 279
P Q +FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L
Sbjct: 195 PEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEAL 253
Query: 280 NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNK 339
L+A DF+ +IFV++ + E+ + L + S ++ M+Q R + K+G
Sbjct: 254 VRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRL 313
Query: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSD 399
IL+ATD+ RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + +
Sbjct: 314 DILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERR 372
Query: 400 ILNQVSKFMFLLI 412
+L + + M L I
Sbjct: 373 LLRNIERTMKLTI 385
>gi|418419638|ref|ZP_12992821.1| cold-shock DEAD box protein A-like protein (ATP-dependent RNA
helicase DEAD-like protein) [Mycobacterium abscessus
subsp. bolletii BD]
gi|364001268|gb|EHM22464.1| cold-shock DEAD box protein A-like protein (ATP-dependent RNA
helicase DEAD-like protein) [Mycobacterium abscessus
subsp. bolletii BD]
Length = 598
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 128/346 (36%), Positives = 196/346 (56%), Gaps = 3/346 (0%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D + PE+LRA+ D G+E PS +Q IP + G DV+ A++G GKTA F + L +
Sbjct: 25 FADLHIAPEVLRAVSDVGYETPSAIQAATIPPLLAGSDVVGLAQTGTGKTAAFAIPILSK 84
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ ALVL TRELA Q+ F R+ ++P + V YGG + + LK
Sbjct: 85 IDLTSKDTQALVLAPTRELALQVSEAFGRYGAHMPKLNVLPIYGGQSYVVQLAGLKRGA- 143
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
Q+VVGTPGR++ L L ++ + +LDE D+ML ++ DV+ I TP KQV +
Sbjct: 144 QVVVGTPGRVIDHLERGTLDLSHLDYLVLDEADEML-TMGFAEDVERILADTPEYKQVAL 202
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ IR + KK++ DP+EI +D + T + Q +I+++ K L +L+
Sbjct: 203 FSATMPTTIRRLTKKYLHDPVEIKIDAKTS-TAENITQRFIQVAGPRKMDALTRILEVET 261
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F +++FV++ E+ L F + I+ ++Q +R K G ILVATD+
Sbjct: 262 FEAMIVFVRTKQATEEVADKLKARGFAAAAINGDINQSQRERTINALKAGTIDILVATDV 321
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
RG+D+ER++ V+NYD+P ++Y+HR+GR GR G G A+ FVS
Sbjct: 322 AARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGTAVLFVS 367
>gi|422019162|ref|ZP_16365712.1| ATP-dependent RNA helicase DeaD [Providencia alcalifaciens Dmel2]
gi|414103704|gb|EKT65278.1| ATP-dependent RNA helicase DeaD [Providencia alcalifaciens Dmel2]
Length = 655
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 133/366 (36%), Positives = 206/366 (56%), Gaps = 6/366 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D L +L A+ D G+E PS +Q +CIP + G DV+ A++G GKTA F L L
Sbjct: 9 FADLGLSASILNALSDLGYEKPSPIQQQCIPLLLDGNDVLGMAQTGSGKTAAFSLPLLHN 68
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ + LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 69 IDADLKAPQILVLAPTRELAVQVAEAMSDFSKHMNRVNVVALYGGQRYDVQLRALR-QGP 127
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
Q+VVGTPGR+L + L L N++ +LDE D+ML + DV+ I P + Q +
Sbjct: 128 QVVVGTPGRLLDHLKRGTLDLSNLKGLVLDEADEMLR-MGFIEDVENIMSQIPAEHQTAL 186
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH-GLVQHYIKLSELEKNRKLNDLLDAL 286
FSAT+ + IR + ++FM+DP EI + +A +T + Q Y + + KN L L+A
Sbjct: 187 FSATMPEPIRRITRRFMKDPKEIRI--QASITTRPDIAQSYWTVYGMRKNEALVRFLEAE 244
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
DF+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD
Sbjct: 245 DFDAAIIFVRTKNATLEVAETLERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATD 304
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
+ RG+D+ER+++V+NYD+P A++Y+HR+GR GR G G A+ FV + + +L V +
Sbjct: 305 VAARGLDVERISLVVNYDIPMDAESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNVER 363
Query: 407 FMFLLI 412
M L I
Sbjct: 364 TMKLTI 369
>gi|212709939|ref|ZP_03318067.1| hypothetical protein PROVALCAL_00989 [Providencia alcalifaciens DSM
30120]
gi|212687451|gb|EEB46979.1| hypothetical protein PROVALCAL_00989 [Providencia alcalifaciens DSM
30120]
Length = 657
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 133/366 (36%), Positives = 206/366 (56%), Gaps = 6/366 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D L +L A+ D G+E PS +Q +CIP + G DV+ A++G GKTA F L L
Sbjct: 9 FADLGLSASILNALSDLGYEKPSPIQQQCIPLLLDGNDVLGMAQTGSGKTAAFSLPLLHN 68
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ + LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 69 IDADLKAPQILVLAPTRELAVQVAEAMSDFSKHMNRVNVVALYGGQRYDVQLRALR-QGP 127
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
Q+VVGTPGR+L + L L N++ +LDE D+ML + DV+ I P + Q +
Sbjct: 128 QVVVGTPGRLLDHLKRGTLDLSNLKGLVLDEADEMLR-MGFIEDVENIMSQIPAEHQTAL 186
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH-GLVQHYIKLSELEKNRKLNDLLDAL 286
FSAT+ + IR + ++FM+DP EI + +A +T + Q Y + + KN L L+A
Sbjct: 187 FSATMPEPIRRITRRFMKDPKEIRI--QASITTRPDIAQSYWTVYGMRKNEALVRFLEAE 244
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
DF+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD
Sbjct: 245 DFDAAIIFVRTKNATLEVAETLERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATD 304
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSK 406
+ RG+D+ER+++V+NYD+P A++Y+HR+GR GR G G A+ FV + + +L V +
Sbjct: 305 VAARGLDVERISLVVNYDIPMDAESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNVER 363
Query: 407 FMFLLI 412
M L I
Sbjct: 364 TMKLTI 369
>gi|293375719|ref|ZP_06621991.1| putative ATP-dependent RNA helicase DeaD [Turicibacter sanguinis
PC909]
gi|325838961|ref|ZP_08166744.1| DEAD-box ATP-dependent RNA helicase CshA [Turicibacter sp. HGF1]
gi|292645662|gb|EFF63700.1| putative ATP-dependent RNA helicase DeaD [Turicibacter sanguinis
PC909]
gi|325490616|gb|EGC92928.1| DEAD-box ATP-dependent RNA helicase CshA [Turicibacter sp. HGF1]
Length = 538
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 129/345 (37%), Positives = 201/345 (58%), Gaps = 3/345 (0%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F+D L P L+AI + G+ PS +Q E IP + G D+I QA++G GKTA F+L L++
Sbjct: 6 FKDLALSPSTLKAIEEIGYVKPSPIQAEAIPVVLAGKDIIGQAQTGTGKTAAFMLPILEK 65
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P V ALVLC TRELA Q+ E ++FS D+ + YGG + LK
Sbjct: 66 IDPKNKNVQALVLCPTRELAVQVHEESKKFSRNNRDVHILSIYGGQSYDPQIRALKKGV- 124
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR++ R L L+N++ +LDE D+ML ++ + D++EI + TP +Q +M
Sbjct: 125 QIVVGTPGRVMDHMRRGTLKLENLKMLVLDEADEML-NMGFKDDIEEILEKTPESRQTVM 183
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+++EI + K + ++P + V E +L+ + Q+Y+++ ++ + + +D +
Sbjct: 184 FSATMAREIMNIAKTYQKNPEVVKVVSE-ELSNKKIDQYYVEVKRQDRVQAMIRCIDMMG 242
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
++F + EL L E + + +H + Q +R F+ N ILVATD+
Sbjct: 243 LTSSIVFTNTKREVDELVSKLQEEGYVTEGLHGDLKQAQRDRVMNSFRRKNVNILVATDI 302
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFV 392
RGID+ V V NYD+P + + Y+HR+GR GR G GL+ITFV
Sbjct: 303 AARGIDVSNVEAVFNYDIPLNEENYVHRIGRTGRAGMTGLSITFV 347
>gi|148906006|gb|ABR16163.1| unknown [Picea sitchensis]
Length = 477
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 140/380 (36%), Positives = 214/380 (56%), Gaps = 13/380 (3%)
Query: 15 DYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQH 74
D++ + P K A KG + F D+ LK ELL I + GFE PS +Q
Sbjct: 78 DWKSQLKIPPPDSRYKTEDVTATKG------NEFEDYFLKRELLMGIYEKGFERPSPIQE 131
Query: 75 ECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEF 134
E IP A+ G D++ +AK+G GKTA F + L++ +P + L+L TRELA Q
Sbjct: 132 ESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDPKKNSIQVLLLVPTRELALQTSQVC 191
Query: 135 ERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKNVRH 193
+ + +L I++ V GG ++K D+++ P I+V TPGR+L L + +LK+
Sbjct: 192 KELAKHL-KIQIMVTTGGTSLK--DDIMRLYQPVHILVATPGRVLDLTKKGVCNLKDCAM 248
Query: 194 FILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVD 253
++DE DK+L S + + V+++ P ++Q++++SAT ++ K+++ P I +
Sbjct: 249 LVMDEADKLL-SPEFQPLVEQLIGFLPENRQILLYSATFPVTVKSFKDKYLRKPYVINLM 307
Query: 254 DEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNF 313
DE LTL G+ Q Y + E +K LN L L NQ +IF SV+R L K + E +
Sbjct: 308 DE--LTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGY 365
Query: 314 PSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYL 373
IH+ M Q R + F+ G R LV +DL RGIDI+ VN+VIN+D P +++TYL
Sbjct: 366 SCFYIHAKMLQSHRNRVFHDFRNGACRNLVCSDLFTRGIDIQAVNVVINFDFPKNSETYL 425
Query: 374 HRVGRAGRFGTKGLAITFVS 393
HRVGR+GRFG GLA+ ++
Sbjct: 426 HRVGRSGRFGHLGLAVNLIT 445
>gi|300938072|ref|ZP_07152850.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 21-1]
gi|300456932|gb|EFK20425.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 21-1]
Length = 646
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 205/373 (54%), Gaps = 4/373 (1%)
Query: 40 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 99
Y+ + F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA
Sbjct: 17 YMAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAA 76
Query: 100 FVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHK 159
F L LQ +P LVL TRELA Q+ FS ++ + V YGG +
Sbjct: 77 FSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQL 136
Query: 160 DLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
L+ + PQIVVGTPGR+L + L L + +LDE D+ML + DV+ I
Sbjct: 137 RALR-QGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQI 194
Query: 220 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKL 279
P Q +FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L
Sbjct: 195 PEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEAL 253
Query: 280 NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNK 339
L+A DF+ +IFV++ + E+ + L + S ++ M+Q R + K+G
Sbjct: 254 VRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRL 313
Query: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSD 399
IL+ATD+ RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + +
Sbjct: 314 DILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERR 372
Query: 400 ILNQVSKFMFLLI 412
+L + + M L I
Sbjct: 373 LLRNIERTMKLTI 385
>gi|12517770|gb|AAG58298.1|AE005544_12 inducible ATP-independent RNA helicase [Escherichia coli O157:H7
str. EDL933]
gi|13363516|dbj|BAB37466.1| inducible ATP-independent RNA helicase [Escherichia coli O157:H7
str. Sakai]
gi|209758398|gb|ACI77511.1| inducible ATP-independent RNA helicase [Escherichia coli]
gi|209758400|gb|ACI77512.1| inducible ATP-independent RNA helicase [Escherichia coli]
gi|209758402|gb|ACI77513.1| inducible ATP-independent RNA helicase [Escherichia coli]
gi|209758406|gb|ACI77515.1| inducible ATP-independent RNA helicase [Escherichia coli]
Length = 646
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 205/373 (54%), Gaps = 4/373 (1%)
Query: 40 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 99
Y+ + F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA
Sbjct: 17 YMAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAA 76
Query: 100 FVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHK 159
F L LQ +P LVL TRELA Q+ FS ++ + V YGG +
Sbjct: 77 FSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQL 136
Query: 160 DLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
L+ + PQIVVGTPGR+L + L L + +LDE D+ML + DV+ I
Sbjct: 137 RALR-QGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQI 194
Query: 220 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKL 279
P Q +FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L
Sbjct: 195 PEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEAL 253
Query: 280 NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNK 339
L+A DF+ +IFV++ + E+ + L + S ++ M+Q R + K+G
Sbjct: 254 VRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRL 313
Query: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSD 399
IL+ATD+ RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + +
Sbjct: 314 DILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERR 372
Query: 400 ILNQVSKFMFLLI 412
+L + + M L I
Sbjct: 373 LLRNIERTMKLTI 385
>gi|398392974|ref|XP_003849946.1| ATP-dependent RNA helicase [Zymoseptoria tritici IPO323]
gi|339469824|gb|EGP84922.1| hypothetical protein MYCGRDRAFT_74526 [Zymoseptoria tritici IPO323]
Length = 400
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 139/349 (39%), Positives = 205/349 (58%), Gaps = 7/349 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F LK LLR I G+E PS VQ I Q G D I QA+SG GKTA F +STLQ
Sbjct: 28 FEAMHLKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISTLQV 87
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ + ALVL TRELA QI Y+ +++ GG N+ +D+ K +
Sbjct: 88 IDTAVRETQALVLSPTRELATQIQSVLLALGDYM-NVQCHACIGGTNVG--EDIRKLDYG 144
Query: 168 Q-IVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
Q +V GTPGR+ + R ++L +N++ ILDE D++L R + ++++ P QV+
Sbjct: 145 QHVVSGTPGRVADMIRRRNLRTRNIKMLILDEADELLNR-GFREQIYDVYRYLPPATQVV 203
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDA 285
+ SATL ++ + KFM DP+ I V + +LTL GL Q++I + + E K L DL D
Sbjct: 204 VVSATLPYDVLDMTTKFMTDPVRILVKRD-ELTLEGLKQYFIAVEKEEWKFDTLCDLYDT 262
Query: 286 LDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVAT 345
L Q VIF + + L + + NF +H M Q+ER + F++GN R+L++T
Sbjct: 263 LTITQAVIFCNTRRKVDWLTDKMRDANFTVSSMHGEMPQKERDSIMGDFRQGNSRVLIST 322
Query: 346 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSS 394
D+ RGID+++V++VINYD+P + + Y+HR+GR+GRFG KG+AI FV+S
Sbjct: 323 DVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTS 371
>gi|209758404|gb|ACI77514.1| inducible ATP-independent RNA helicase [Escherichia coli]
Length = 646
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 205/373 (54%), Gaps = 4/373 (1%)
Query: 40 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 99
Y+ + F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA
Sbjct: 17 YMAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAA 76
Query: 100 FVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHK 159
F L LQ +P LVL TRELA Q+ FS ++ + V YGG +
Sbjct: 77 FSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQL 136
Query: 160 DLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
L+ + PQIVVGTPGR+L + L L + +LDE D+ML + DV+ I
Sbjct: 137 RALR-QGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQI 194
Query: 220 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKL 279
P Q +FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L
Sbjct: 195 PEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVA-TRPDISQSYWTVWGMRKNEAL 253
Query: 280 NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNK 339
L+A DF+ +IFV++ + E+ + L + S ++ M+Q R + K+G
Sbjct: 254 VRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRL 313
Query: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSD 399
IL+ATD+ RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + +
Sbjct: 314 DILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERR 372
Query: 400 ILNQVSKFMFLLI 412
+L + + M L I
Sbjct: 373 LLRNIERTMKLTI 385
>gi|261342608|ref|ZP_05970466.1| cold-shock DEAD box protein A [Enterobacter cancerogenus ATCC
35316]
gi|288315255|gb|EFC54193.1| cold-shock DEAD box protein A [Enterobacter cancerogenus ATCC
35316]
Length = 629
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 131/365 (35%), Positives = 202/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L L
Sbjct: 8 FADLGLKAPILEALTDLGYEKPSPIQAECIPHLLSGRDVLGMAQTGSGKTAAFSLPLLHN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P+ LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 IDPDLRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWSVYGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|330846058|ref|XP_003294872.1| hypothetical protein DICPUDRAFT_93301 [Dictyostelium purpureum]
gi|325074579|gb|EGC28605.1| hypothetical protein DICPUDRAFT_93301 [Dictyostelium purpureum]
Length = 413
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 142/390 (36%), Positives = 222/390 (56%), Gaps = 22/390 (5%)
Query: 6 DNEYEDEL-LDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDS 64
D+ ++ +L L ++E Q D AT+ N F D LK +LLR I +
Sbjct: 12 DDNWKAQLKLPPKDERRQTEDVTATEGNE--------------FDDLHLKRDLLRGIFEK 57
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
G+ PS +Q + IP A+ G D++ +AK+G GKTA F++ L++T+P + L+L TR
Sbjct: 58 GYVRPSPIQEKAIPIALAGRDIMARAKNGTGKTASFLIPALEKTDPTKDVIQVLILVPTR 117
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARD 183
ELA Q + Y+ +++V GG ++K D+++ P I+V TPGR+L LA+
Sbjct: 118 ELALQTSQVCKELGKYM-NVQVMASTGGTSLK--DDIMRLYSPVHILVATPGRVLDLAQK 174
Query: 184 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF 243
+L N + I+DE DK+L S + + V+++ P +Q+++FSAT ++ +++
Sbjct: 175 NVANLSNCQTMIMDEADKLL-SQEFQPLVEQLINFLPPQRQILLFSATFPVTVKSFKEQY 233
Query: 244 MQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAE 303
+Q EI + +E LTL G+ Q+Y + E +K LN L L NQ +IF SV+R
Sbjct: 234 LQQAFEINLMEE--LTLKGVTQYYAFVEERQKIHCLNTLFSKLQINQSIIFCNSVNRVEL 291
Query: 304 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 363
L K + E + IH+ M Q R + F+ G R LV++DL RGIDI+ VN+VIN+
Sbjct: 292 LAKKITELGYSCFFIHAKMVQAHRNRVFHDFRNGACRNLVSSDLFTRGIDIQDVNVVINF 351
Query: 364 DMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
D P ++TYLHR+GR+GRFG GLAI ++
Sbjct: 352 DFPKHSETYLHRIGRSGRFGHLGLAINLIT 381
>gi|426195288|gb|EKV45218.1| hypothetical protein AGABI2DRAFT_194203 [Agaricus bisporus var.
bisporus H97]
Length = 506
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 141/347 (40%), Positives = 204/347 (58%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D ++ ELL I ++GFE PS +Q E IP A+ D++ +AK+G GKTA FV+ +LQQ
Sbjct: 47 FEDMSIRRELLMGIFEAGFEKPSPIQEEAIPFALTKRDILARAKNGTGKTAAFVIPSLQQ 106
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
+ N ++ AL+L TRELA Q + ++ I+V V GG +K D+L+ +E
Sbjct: 107 IDINKHKIQALLLVPTRELALQTSQVCKTLGKHM-GIQVMVTTGGTTLK--DDILRLSES 163
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
++VGTPGRIL LA L F++DE DK+L S + ++++ P ++QVM
Sbjct: 164 VHVLVGTPGRILDLAGKGVADLSECPVFVMDEADKLL-SPEFAPVMEQLLSYLPSERQVM 222
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K M+ P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 223 LFSATFPMIVKTFKDKHMRSPYEINLMDE--LTLRGVTQYYAYVEERQKVHCLNTLFSKL 280
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q R + F+ G R LV +D
Sbjct: 281 QINQSIIFCNSTNRVELLAKKVTELGYSCFYSHAKMLQSHRNRVFHDFRNGVCRNLVCSD 340
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +++TYLHR+GR+GRFG GLAI V+
Sbjct: 341 LLTRGIDIQAVNVVINFDFPKNSETYLHRIGRSGRFGHLGLAINLVT 387
>gi|300929852|ref|ZP_07145298.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 187-1]
gi|300462214|gb|EFK25707.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 187-1]
Length = 646
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 205/373 (54%), Gaps = 4/373 (1%)
Query: 40 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 99
Y+ + F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA
Sbjct: 17 YMAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAA 76
Query: 100 FVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHK 159
F L LQ +P LVL TRELA Q+ FS ++ + V YGG +
Sbjct: 77 FSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQL 136
Query: 160 DLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
L+ + PQIVVGTPGR+L + L L + +LDE D+ML + DV+ I
Sbjct: 137 RALR-QGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQI 194
Query: 220 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKL 279
P Q +FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L
Sbjct: 195 PEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEAL 253
Query: 280 NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNK 339
L+A DF+ +IFV++ + E+ + L + S ++ M+Q R + K+G
Sbjct: 254 VRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRL 313
Query: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSD 399
IL+ATD+ RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + +
Sbjct: 314 DILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERR 372
Query: 400 ILNQVSKFMFLLI 412
+L + + M L I
Sbjct: 373 LLRNIERTMKLTI 385
>gi|453382103|dbj|GAC83310.1| ATP-dependent DEAD-box RNA helicase DeaD [Gordonia paraffinivorans
NBRC 108238]
Length = 580
Score = 243 bits (621), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 124/346 (35%), Positives = 199/346 (57%), Gaps = 3/346 (0%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D ++P + AI D G+E PS +Q IP + G DV+ A++G GKTA F + L +
Sbjct: 18 FDDLGIEPRVRAAISDVGYETPSPIQAATIPPLMAGRDVVGLAQTGTGKTAAFAIPILSR 77
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ + AL+L TRELA Q+ F R+S ++P++KV YGG + + L+
Sbjct: 78 LDTSAKTPQALILAPTRELALQVSEAFGRYSAHMPEVKVLPIYGGQSYGVQLAGLRRGA- 136
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
Q++VGTPGR++ K L + N+ +LDE D+ML ++ DV+ I TP KQV +
Sbjct: 137 QVIVGTPGRVIDHLDRKTLDISNLEFLVLDEADEML-TMGFAEDVERILAETPDSKQVAL 195
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ IR + ++++ DP EI V + T + Q Y+++S K L L+ +
Sbjct: 196 FSATMPSAIRRLAQRYLNDPQEITVKSKTA-TAQNITQRYLQVSHQRKLDALTRFLEVEE 254
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +++FV++ EL + L ++ I+ ++Q +R K G+ ILVATD+
Sbjct: 255 FDAMIVFVRTKQATEELAEKLRSRGLSAVAINGDLAQAQRERTINQLKNGSIDILVATDV 314
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
RG+D++R++ V+NYD+P ++Y+HR+GR GR G G A+ FVS
Sbjct: 315 AARGLDVDRISHVVNYDIPHDTESYVHRIGRTGRAGRSGNALLFVS 360
>gi|301047996|ref|ZP_07195038.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 185-1]
gi|300300139|gb|EFJ56524.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 185-1]
Length = 646
Score = 243 bits (621), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 134/373 (35%), Positives = 205/373 (54%), Gaps = 4/373 (1%)
Query: 40 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 99
Y+ + F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA
Sbjct: 17 YMAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAA 76
Query: 100 FVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHK 159
F L LQ +P LVL TRELA Q+ FS ++ + V YGG +
Sbjct: 77 FSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQL 136
Query: 160 DLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
L+ + PQIVVGTPGR+L + L L + +LDE D+ML + DV+ I
Sbjct: 137 RALR-QGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQI 194
Query: 220 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKL 279
P Q +FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L
Sbjct: 195 PAGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEAL 253
Query: 280 NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNK 339
L+A DF+ +IFV++ + E+ + L + S ++ M+Q R + K+G
Sbjct: 254 VRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRL 313
Query: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSD 399
IL+ATD+ RG+D+ER+++VINYD+P +++Y+HR+GR GR G G A+ FV + +
Sbjct: 314 DILIATDVAARGLDVERISLVINYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERR 372
Query: 400 ILNQVSKFMFLLI 412
+L + + M L I
Sbjct: 373 LLRNIERTMKLTI 385
>gi|296817029|ref|XP_002848851.1| eukaryotic initiation factor 4A-12 [Arthroderma otae CBS 113480]
gi|302506162|ref|XP_003015038.1| hypothetical protein ARB_06798 [Arthroderma benhamiae CBS 112371]
gi|238839304|gb|EEQ28966.1| eukaryotic initiation factor 4A-12 [Arthroderma otae CBS 113480]
gi|291178609|gb|EFE34398.1| hypothetical protein ARB_06798 [Arthroderma benhamiae CBS 112371]
gi|326469057|gb|EGD93066.1| eukaryotic initiation factor 4A-12 [Trichophyton tonsurans CBS
112818]
gi|326480615|gb|EGE04625.1| eukaryotic initiation factor 4A-12 [Trichophyton equinum CBS
127.97]
Length = 399
Score = 243 bits (621), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 140/349 (40%), Positives = 205/349 (58%), Gaps = 7/349 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK LLR I G+E PS VQ I Q G D I QA+SG GKTA F +S LQ
Sbjct: 27 FDDMHLKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISILQV 86
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ + ALVL TRELA QI Y+ +++ GG N+ +D+ K E
Sbjct: 87 IDTVLRESQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVG--EDIRKLEHG 143
Query: 168 Q-IVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
Q +V GTPGR+ + R + L +N++ +LDE D++L R + ++++ P QV+
Sbjct: 144 QHVVSGTPGRVADMIRRRHLRTRNIKMLVLDEADELLNR-GFREQIYDVYRYLPPATQVV 202
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDA 285
+ SATL ++ + KFM DP+ I V + +LTL GL Q++I + + E K L DL D
Sbjct: 203 VVSATLPYDVLDMTTKFMTDPVRILVKRD-ELTLEGLKQYFIAVEKEEWKFDTLCDLYDT 261
Query: 286 LDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVAT 345
L Q VIF + + L + E NF +H M Q+ER + + F++GN R+L++T
Sbjct: 262 LTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLIST 321
Query: 346 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSS 394
D+ RGID+++V++VINYD+P + + Y+HR+GR+GRFG KG+AI FV+S
Sbjct: 322 DVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTS 370
>gi|261345155|ref|ZP_05972799.1| ATP-dependent RNA helicase DeaD [Providencia rustigianii DSM 4541]
gi|282566845|gb|EFB72380.1| ATP-dependent RNA helicase DeaD [Providencia rustigianii DSM 4541]
Length = 660
Score = 243 bits (621), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 202/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D L +L A+ D G+E PS +Q +CIP + G DV+ A++G GKTA F L L
Sbjct: 9 FADLGLSASILNALSDLGYEKPSPIQQQCIPLLLNGNDVLGMAQTGSGKTAAFGLPLLHN 68
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P+ LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 69 IDPDLKAPQILVLAPTRELAVQVAEALSDFSKHMNRVNVVALYGGQRYDVQLRALR-QGP 127
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
Q+VVGTPGR+L + L L ++ +LDE D+ML + DV+ I P Q +
Sbjct: 128 QVVVGTPGRLLDHLKRGTLDLSKLKGLVLDEADEMLR-MGFIDDVENIMSQIPAQHQTAL 186
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM+DP EI + T + Q Y +S + KN L L++ D
Sbjct: 187 FSATMPEPIRRITRRFMKDPKEIRIQSSIT-TRPDIAQSYWTVSGMRKNEALVRFLESED 245
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K G IL+ATD+
Sbjct: 246 FDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKNGRLDILIATDV 305
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P A++Y+HR+GR GR G G A+ FV + + +L V +
Sbjct: 306 AARGLDVERISLVVNYDIPMDAESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNVERT 364
Query: 408 MFLLI 412
M L I
Sbjct: 365 MKLTI 369
>gi|377577028|ref|ZP_09806011.1| ATP-dependent RNA helicase DeaD [Escherichia hermannii NBRC 105704]
gi|377541556|dbj|GAB51176.1| ATP-dependent RNA helicase DeaD [Escherichia hermannii NBRC 105704]
Length = 646
Score = 243 bits (621), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 203/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L L
Sbjct: 8 FSDLGLKTPILEALNDLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKTAAFSLPLLNN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMHGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L+L N+ +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLNLSNLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVYGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|225684976|gb|EEH23260.1| ATP-dependent RNA helicase FAL1 [Paracoccidioides brasiliensis
Pb03]
gi|226294288|gb|EEH49708.1| ATP-dependent RNA helicase FAL1 [Paracoccidioides brasiliensis
Pb18]
Length = 399
Score = 243 bits (621), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 142/362 (39%), Positives = 210/362 (58%), Gaps = 8/362 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK LLR I G+E PS VQ I Q G D I QA+SG GKTA F +S LQ
Sbjct: 27 FEDMHLKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISILQV 86
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ + ALVL TRELA QI Y+ +++ GG N+ +D+ K +
Sbjct: 87 IDTVLRETQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVG--EDIRKLDHG 143
Query: 168 Q-IVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
Q +V GTPGR+ + R + L +N++ +LDE D++L R + ++++ P QV+
Sbjct: 144 QHVVSGTPGRVADMIRRRHLRTRNIKMLVLDEADELLNR-GFREQIYDVYRYLPPATQVV 202
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDA 285
+ SATL ++ + KFM DP+ I V + +LTL GL Q++I + + E K L DL D
Sbjct: 203 VVSATLPYDVLDMTTKFMTDPVRILVKRD-ELTLEGLKQYFIAVEKEEWKFDTLCDLYDT 261
Query: 286 LDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVAT 345
L Q VIF + + L + E NF +H M Q+ER + + F++GN R+L++T
Sbjct: 262 LTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLIST 321
Query: 346 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVS 405
D+ RGID+++V++VINYD+P + + Y+HR+GR+GRFG KG+AI FV+S D IL +
Sbjct: 322 DVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTS-EDVRILRDIE 380
Query: 406 KF 407
+
Sbjct: 381 LY 382
>gi|116199007|ref|XP_001225315.1| eukaryotic initiation factor 4A-12 [Chaetomium globosum CBS 148.51]
gi|118573324|sp|Q2GWJ5.1|FAL1_CHAGB RecName: Full=ATP-dependent RNA helicase FAL1
gi|88178938|gb|EAQ86406.1| eukaryotic initiation factor 4A-12 [Chaetomium globosum CBS 148.51]
Length = 394
Score = 243 bits (621), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 147/379 (38%), Positives = 217/379 (57%), Gaps = 10/379 (2%)
Query: 41 VGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVF 100
V +H + F LK LLR I G+E PS VQ I Q G D I QA+SG GKTA F
Sbjct: 23 VTVHPT-FESMSLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATF 81
Query: 101 VLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKD 160
+S LQ + + ALVL TRELA QI Y+ +++ GG N+ +D
Sbjct: 82 SISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVG--ED 138
Query: 161 LLKNECPQ-IVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
+ K + Q IV GTPGR+ + R + L ++++ +LDE D++L R + ++++
Sbjct: 139 IRKLDYGQHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNQ-GFREQIYDVYRYL 197
Query: 220 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL-SELEKNRK 278
P QV++ SATL ++ + KFM DP+ I V + +LTL GL Q++I + E K
Sbjct: 198 PPATQVVVVSATLPYDVLDMTTKFMTDPVRILVKRD-ELTLEGLKQYFIAVEKEDWKFDT 256
Query: 279 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGN 338
L DL D L Q VIF + + L + E NF +H M Q+ER + + F++GN
Sbjct: 257 LCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDMPQKERDSIMQDFRQGN 316
Query: 339 KRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDS 398
R+L++TD+ RGID+++V++VINYD+P + + Y+HR+GR+GRFG KG+AI FV+S D
Sbjct: 317 SRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTS-EDV 375
Query: 399 DILNQVSKFMFLLIGSFQC 417
IL + + M+L F C
Sbjct: 376 RILRDI-ECMWLPSPCFSC 393
>gi|117625458|ref|YP_858781.1| ATP-dependent RNA helicase DeaD [Escherichia coli APEC O1]
gi|209920639|ref|YP_002294723.1| ATP-dependent RNA helicase DeaD [Escherichia coli SE11]
gi|227887886|ref|ZP_04005691.1| ATP-dependent RNA helicase DeaD [Escherichia coli 83972]
gi|300817586|ref|ZP_07097802.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 107-1]
gi|300904348|ref|ZP_07122201.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 84-1]
gi|300918917|ref|ZP_07135476.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 115-1]
gi|300926099|ref|ZP_07141917.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 182-1]
gi|300948811|ref|ZP_07162879.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 116-1]
gi|300955748|ref|ZP_07168093.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 175-1]
gi|300977829|ref|ZP_07174069.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 200-1]
gi|300990761|ref|ZP_07179333.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 45-1]
gi|301301782|ref|ZP_07207916.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 124-1]
gi|301326415|ref|ZP_07219769.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 78-1]
gi|301644873|ref|ZP_07244845.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 146-1]
gi|344915327|ref|NP_708963.4| inducible ATP-independent RNA helicase [Shigella flexneri 2a str.
301]
gi|386631044|ref|YP_006150764.1| ATP-dependent RNA helicase DeaD [Escherichia coli str. 'clone D
i2']
gi|386635964|ref|YP_006155683.1| ATP-dependent RNA helicase DeaD [Escherichia coli str. 'clone D
i14']
gi|386706429|ref|YP_006170276.1| cold-shock DEAD-box protein A [Escherichia coli P12b]
gi|387831049|ref|YP_003350986.1| RNA helicase [Escherichia coli SE15]
gi|415861788|ref|ZP_11535398.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 85-1]
gi|415875683|ref|ZP_11542362.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 79-10]
gi|422353708|ref|ZP_16434457.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 117-3]
gi|422357253|ref|ZP_16437920.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 110-3]
gi|422362336|ref|ZP_16442907.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 153-1]
gi|422370375|ref|ZP_16450768.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 16-3]
gi|422376589|ref|ZP_16456838.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 60-1]
gi|422379999|ref|ZP_16460180.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 57-2]
gi|427806365|ref|ZP_18973432.1| inducible ATP-independent RNA helicase [Escherichia coli chi7122]
gi|427810956|ref|ZP_18978021.1| inducible ATP-independent RNA helicase [Escherichia coli]
gi|606102|gb|AAA57965.1| two frameshifts relative to ECODEAD [Escherichia coli str. K-12
substr. MG1655]
gi|30042761|gb|AAP18484.1| inducible ATP-independent RNA helicase [Shigella flexneri 2a str.
2457T]
gi|56383827|gb|AAN44670.2| inducible ATP-independent RNA helicase [Shigella flexneri 2a str.
301]
gi|73857176|gb|AAZ89883.1| inducible ATP-independent RNA helicase [Shigella sonnei Ss046]
gi|81247009|gb|ABB67717.1| inducible ATP-independent RNA helicase [Shigella boydii Sb227]
gi|115514582|gb|ABJ02657.1| inducible ATP-independent RNA helicase [Escherichia coli APEC O1]
gi|209913898|dbj|BAG78972.1| RNA helicase [Escherichia coli SE11]
gi|227835282|gb|EEJ45748.1| ATP-dependent RNA helicase DeaD [Escherichia coli 83972]
gi|281180206|dbj|BAI56536.1| RNA helicase [Escherichia coli SE15]
gi|300308206|gb|EFJ62726.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 200-1]
gi|300317381|gb|EFJ67165.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 175-1]
gi|300403699|gb|EFJ87237.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 84-1]
gi|300407069|gb|EFJ90607.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 45-1]
gi|300413943|gb|EFJ97253.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 115-1]
gi|300417864|gb|EFK01175.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 182-1]
gi|300451700|gb|EFK15320.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 116-1]
gi|300529884|gb|EFK50946.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 107-1]
gi|300842763|gb|EFK70523.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 124-1]
gi|300846904|gb|EFK74664.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 78-1]
gi|301076818|gb|EFK91624.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 146-1]
gi|315257088|gb|EFU37056.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 85-1]
gi|315288936|gb|EFU48334.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 110-3]
gi|315294907|gb|EFU54246.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 153-1]
gi|315297886|gb|EFU57156.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 16-3]
gi|324008761|gb|EGB77980.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 57-2]
gi|324012112|gb|EGB81331.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 60-1]
gi|324018314|gb|EGB87533.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 117-3]
gi|342929203|gb|EGU97925.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 79-10]
gi|355421943|gb|AER86140.1| ATP-dependent RNA helicase DeaD [Escherichia coli str. 'clone D
i2']
gi|355426863|gb|AER91059.1| ATP-dependent RNA helicase DeaD [Escherichia coli str. 'clone D
i14']
gi|383104597|gb|AFG42106.1| Cold-shock DEAD-box protein A [Escherichia coli P12b]
gi|412964547|emb|CCK48476.1| inducible ATP-independent RNA helicase [Escherichia coli chi7122]
gi|412971135|emb|CCJ45790.1| inducible ATP-independent RNA helicase [Escherichia coli]
Length = 646
Score = 243 bits (621), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 205/373 (54%), Gaps = 4/373 (1%)
Query: 40 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 99
Y+ + F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA
Sbjct: 17 YMAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAA 76
Query: 100 FVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHK 159
F L LQ +P LVL TRELA Q+ FS ++ + V YGG +
Sbjct: 77 FSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQL 136
Query: 160 DLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
L+ + PQIVVGTPGR+L + L L + +LDE D+ML + DV+ I
Sbjct: 137 RALR-QGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQI 194
Query: 220 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKL 279
P Q +FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L
Sbjct: 195 PEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEAL 253
Query: 280 NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNK 339
L+A DF+ +IFV++ + E+ + L + S ++ M+Q R + K+G
Sbjct: 254 VRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRL 313
Query: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSD 399
IL+ATD+ RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + +
Sbjct: 314 DILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERR 372
Query: 400 ILNQVSKFMFLLI 412
+L + + M L I
Sbjct: 373 LLRNIERTMKLTI 385
>gi|293406774|ref|ZP_06650700.1| ATP-dependent RNA helicase DeaD [Escherichia coli FVEC1412]
gi|298382514|ref|ZP_06992111.1| ATP-dependent RNA helicase DeaD [Escherichia coli FVEC1302]
gi|300897926|ref|ZP_07116305.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 198-1]
gi|291426780|gb|EFE99812.1| ATP-dependent RNA helicase DeaD [Escherichia coli FVEC1412]
gi|298277654|gb|EFI19170.1| ATP-dependent RNA helicase DeaD [Escherichia coli FVEC1302]
gi|300358356|gb|EFJ74226.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 198-1]
Length = 650
Score = 243 bits (621), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 205/373 (54%), Gaps = 4/373 (1%)
Query: 40 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 99
Y+ + F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA
Sbjct: 17 YMAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAA 76
Query: 100 FVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHK 159
F L LQ +P LVL TRELA Q+ FS ++ + V YGG +
Sbjct: 77 FSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQL 136
Query: 160 DLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
L+ + PQIVVGTPGR+L + L L + +LDE D+ML + DV+ I
Sbjct: 137 RALR-QGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQI 194
Query: 220 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKL 279
P Q +FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L
Sbjct: 195 PEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEAL 253
Query: 280 NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNK 339
L+A DF+ +IFV++ + E+ + L + S ++ M+Q R + K+G
Sbjct: 254 VRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRL 313
Query: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSD 399
IL+ATD+ RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + +
Sbjct: 314 DILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERR 372
Query: 400 ILNQVSKFMFLLI 412
+L + + M L I
Sbjct: 373 LLRNIERTMKLTI 385
>gi|222157876|ref|YP_002558015.1| Cold-shock DEad box protein A [Escherichia coli LF82]
gi|222034881|emb|CAP77624.1| Cold-shock DEad box protein A [Escherichia coli LF82]
Length = 645
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 205/373 (54%), Gaps = 4/373 (1%)
Query: 40 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 99
Y+ + F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA
Sbjct: 16 YMAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAA 75
Query: 100 FVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHK 159
F L LQ +P LVL TRELA Q+ FS ++ + V YGG +
Sbjct: 76 FSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQL 135
Query: 160 DLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
L+ + PQIVVGTPGR+L + L L + +LDE D+ML + DV+ I
Sbjct: 136 RALR-QGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQI 193
Query: 220 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKL 279
P Q +FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L
Sbjct: 194 PEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEAL 252
Query: 280 NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNK 339
L+A DF+ +IFV++ + E+ + L + S ++ M+Q R + K+G
Sbjct: 253 VRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRL 312
Query: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSD 399
IL+ATD+ RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + +
Sbjct: 313 DILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERR 371
Query: 400 ILNQVSKFMFLLI 412
+L + + M L I
Sbjct: 372 LLRNIERTMKLTI 384
>gi|300823875|ref|ZP_07103999.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 119-7]
gi|309793740|ref|ZP_07688166.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 145-7]
gi|300523643|gb|EFK44712.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 119-7]
gi|308122697|gb|EFO59959.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 145-7]
Length = 646
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 205/373 (54%), Gaps = 4/373 (1%)
Query: 40 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 99
Y+ + F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA
Sbjct: 17 YMAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAA 76
Query: 100 FVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHK 159
F L LQ +P LVL TRELA Q+ FS ++ + V YGG +
Sbjct: 77 FSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQL 136
Query: 160 DLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
L+ + PQIVVGTPGR+L + L L + +LDE D+ML + DV+ I
Sbjct: 137 RALR-QGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQI 194
Query: 220 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKL 279
P Q +FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L
Sbjct: 195 PEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEAL 253
Query: 280 NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNK 339
L+A DF+ +IFV++ + E+ + L + S ++ M+Q R + K+G
Sbjct: 254 VRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRL 313
Query: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSD 399
IL+ATD+ RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + +
Sbjct: 314 DILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERR 372
Query: 400 ILNQVSKFMFLLI 412
+L + + M L I
Sbjct: 373 LLRNIERTMKLTI 385
>gi|357507223|ref|XP_003623900.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355498915|gb|AES80118.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 514
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 141/380 (37%), Positives = 214/380 (56%), Gaps = 13/380 (3%)
Query: 15 DYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQH 74
D++ P + A KG + F D+ LK ELL I + GFE PS +Q
Sbjct: 115 DWKARLKLPPADTRYRTEDVTATKG------NEFEDYFLKRELLMGIYEKGFERPSPIQE 168
Query: 75 ECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEF 134
E IP A+ G D++ +AK+G GKTA F + L++ + + + ++L TRELA Q
Sbjct: 169 ESIPIALTGSDILARAKNGTGKTAAFSIPALEKIDQDNNIIQVVILVPTRELALQTSQVC 228
Query: 135 ERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKNVRH 193
+ +L I+V V GG ++K D+++ P ++VGTPGRIL LA+ LK+
Sbjct: 229 KELGKHL-QIQVMVTTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSM 285
Query: 194 FILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVD 253
++DE DK+L S + + ++++ + P +Q++MFSAT ++ ++++ P I +
Sbjct: 286 LVMDEADKLL-SPEFQPSIEQLIQFLPPTRQILMFSATFPVTVKDFKDRYLRKPYIINLM 344
Query: 254 DEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNF 313
DE LTL G+ Q Y + E +K LN L L NQ +IF SV+R L K + E +
Sbjct: 345 DE--LTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGY 402
Query: 314 PSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYL 373
IH+ M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+D P +++TYL
Sbjct: 403 SCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYL 462
Query: 374 HRVGRAGRFGTKGLAITFVS 393
HRVGR+GRFG GLA+ ++
Sbjct: 463 HRVGRSGRFGHLGLAVNLIT 482
>gi|320167743|gb|EFW44642.1| eIF4AIII protein [Capsaspora owczarzaki ATCC 30864]
Length = 413
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 141/351 (40%), Positives = 204/351 (58%), Gaps = 7/351 (1%)
Query: 46 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTL 105
+ F LKPELL+ I GFE PS +Q I + G DVI QA+SG GKTA F +S L
Sbjct: 37 TDFAQMNLKPELLQGIYAYGFEQPSAIQQRAIRPILKGRDVIAQAQSGTGKTATFSISAL 96
Query: 106 QQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE 165
EP + ALVL TRELA QI Y+ ++ GGV++ +D+ K +
Sbjct: 97 NCVEPATRETQALVLSPTRELAQQIQKVVLALGDYM-GVQCHACIGGVSVA--EDIKKLD 153
Query: 166 CPQ-IVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQ 224
Q +V GTPGR+ + + + L +N++ ILDE D+ML S + + +I++ P Q
Sbjct: 154 YGQHVVSGTPGRVFDMIKRRHLRTRNIKMLILDEADEML-SRGFKEQIYDIYRYLPPTTQ 212
Query: 225 VMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLL 283
V++ SATL E+ + KFM DP+ I V + +LTL G+ Q +I + E K L DL
Sbjct: 213 VVIVSATLPHEVLEITTKFMTDPIRILVKRD-ELTLEGIKQFFISVEREEWKFDTLCDLY 271
Query: 284 DALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILV 343
D L Q VIF + + L + + + NF +H M Q+ER T K F+ G R+L+
Sbjct: 272 DTLIITQAVIFCNTRRKVEFLAEEMAKANFTVSHMHGEMDQKERDTIMKQFRSGATRVLI 331
Query: 344 ATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSS 394
TDL RGID+++V++VINYD+P + + Y+HR+GR+GRFG G+AI FV++
Sbjct: 332 TTDLWARGIDVQQVSLVINYDLPINRENYIHRIGRSGRFGRSGVAINFVTN 382
>gi|375003144|ref|ZP_09727484.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
gi|378446667|ref|YP_005234299.1| ATP-dependent RNA helicase (dead-box protein) [Salmonella enterica
subsp. enterica serovar Typhimurium str. D23580]
gi|378990591|ref|YP_005253755.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|16421839|gb|AAL22152.1| cysteine sulfinate desulfinase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|261248446|emb|CBG26283.1| ATP-dependent RNA helicase (dead-box protein) [Salmonella enterica
subsp. enterica serovar Typhimurium str. D23580]
gi|332990138|gb|AEF09121.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|353077832|gb|EHB43592.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
Length = 646
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 132/373 (35%), Positives = 204/373 (54%), Gaps = 4/373 (1%)
Query: 40 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 99
Y+ + F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA
Sbjct: 17 YMAEFETTFADLGLKAPILEALTDLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKTAA 76
Query: 100 FVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHK 159
F L L +P LVL TRELA Q+ FS ++ + V YGG +
Sbjct: 77 FSLPLLNNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQL 136
Query: 160 DLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
L+ + PQIVVGTPGR+L + L L + +LDE D+ML + DV+ I
Sbjct: 137 RALR-QGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQI 194
Query: 220 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKL 279
P Q +FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L
Sbjct: 195 PEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEAL 253
Query: 280 NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNK 339
L+A DF+ +IFV++ + E+ + L + S ++ M+Q R + K+G
Sbjct: 254 VRFLEAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRL 313
Query: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSD 399
IL+ATD+ RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + +
Sbjct: 314 DILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERR 372
Query: 400 ILNQVSKFMFLLI 412
+L + + M L I
Sbjct: 373 LLRNIERTMKLTI 385
>gi|331654768|ref|ZP_08355768.1| cold-shock DEAD box protein A (ATP-dependent RNA helicasedeaD)
[Escherichia coli M718]
gi|331048150|gb|EGI20227.1| cold-shock DEAD box protein A (ATP-dependent RNA helicasedeaD)
[Escherichia coli M718]
Length = 651
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 205/373 (54%), Gaps = 4/373 (1%)
Query: 40 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 99
Y+ + F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA
Sbjct: 22 YMAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAA 81
Query: 100 FVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHK 159
F L LQ +P LVL TRELA Q+ FS ++ + V YGG +
Sbjct: 82 FSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQL 141
Query: 160 DLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
L+ + PQIVVGTPGR+L + L L + +LDE D+ML + DV+ I
Sbjct: 142 RALR-QGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQI 199
Query: 220 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKL 279
P Q +FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L
Sbjct: 200 PEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEAL 258
Query: 280 NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNK 339
L+A DF+ +IFV++ + E+ + L + S ++ M+Q R + K+G
Sbjct: 259 VRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRL 318
Query: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSD 399
IL+ATD+ RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + +
Sbjct: 319 DILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERR 377
Query: 400 ILNQVSKFMFLLI 412
+L + + M L I
Sbjct: 378 LLRNIERTMKLTI 390
>gi|326802990|ref|YP_004320808.1| delta 1-pyrroline-5-carboxylate dehydrogenase domain-containing
protein [Aerococcus urinae ACS-120-V-Col10a]
gi|326651469|gb|AEA01652.1| DEAD-box ATP-dependent RNA helicase CshA [Aerococcus urinae
ACS-120-V-Col10a]
Length = 508
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 133/348 (38%), Positives = 208/348 (59%), Gaps = 6/348 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F + L P LL+A+ + GFE + +Q + IP A+ G DV+ QA++G GKTA F L L++
Sbjct: 3 FEELNLDPRLLQAVKNMGFEETTPIQAQTIPYALEGRDVLGQAQTGTGKTAAFGLPLLEK 62
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ + + ALV+ TRELA Q E R ++ YGG NI+ +K P
Sbjct: 63 IDHHTEHIQALVIAPTRELAIQNGQELYRLGKE-KGVRTVNVYGGANIRRQIHQIKKGAP 121
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
+VVGTPGR++ L + K L+L + +LDE D+ML ++ D++ I + TP ++Q ++
Sbjct: 122 -VVVGTPGRLIDLMKRKVLNLNFIETLVLDEADEML-NMGFIEDIETIIRATPSNRQTLL 179
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAK-LTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
FSAT+ KEI+ + + FMQDP+ + + EAK +T + Q++ K + EK L +D
Sbjct: 180 FSATMPKEIQRIGEHFMQDPVTVKI--EAKEMTADTIDQYFTKCHDREKFDLLTRFIDVS 237
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
++F ++ R E+++ L+E + + IH +SQE+R + K FK+G ILVATD
Sbjct: 238 HAKLAIVFARTKRRVDEVSRGLIERGYQAEGIHGDLSQEKRSSIMKDFKDGRLEILVATD 297
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSS 394
+ RG+DI V V NYD+P ++Y+HR+GR GR G G++ITFVS+
Sbjct: 298 VAARGLDISNVTHVYNYDIPQDPESYVHRIGRTGRAGKGGMSITFVSN 345
>gi|62129424|gb|AAX67127.1| cysteine sulfinate desulfinase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
Length = 651
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 132/373 (35%), Positives = 204/373 (54%), Gaps = 4/373 (1%)
Query: 40 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 99
Y+ + F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA
Sbjct: 22 YMAEFETTFADLGLKAPILEALTDLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKTAA 81
Query: 100 FVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHK 159
F L L +P LVL TRELA Q+ FS ++ + V YGG +
Sbjct: 82 FSLPLLNNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQL 141
Query: 160 DLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
L+ + PQIVVGTPGR+L + L L + +LDE D+ML + DV+ I
Sbjct: 142 RALR-QGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQI 199
Query: 220 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKL 279
P Q +FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L
Sbjct: 200 PEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEAL 258
Query: 280 NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNK 339
L+A DF+ +IFV++ + E+ + L + S ++ M+Q R + K+G
Sbjct: 259 VRFLEAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRL 318
Query: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSD 399
IL+ATD+ RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + +
Sbjct: 319 DILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERR 377
Query: 400 ILNQVSKFMFLLI 412
+L + + M L I
Sbjct: 378 LLRNIERTMKLTI 390
>gi|91074155|gb|ABE09036.1| Cold-shock DEAD-box protein A [Escherichia coli UTI89]
Length = 651
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 205/373 (54%), Gaps = 4/373 (1%)
Query: 40 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 99
Y+ + F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA
Sbjct: 22 YMAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAA 81
Query: 100 FVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHK 159
F L LQ +P LVL TRELA Q+ FS ++ + V YGG +
Sbjct: 82 FSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQL 141
Query: 160 DLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
L+ + PQIVVGTPGR+L + L L + +LDE D+ML + DV+ I
Sbjct: 142 RALR-QGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQI 199
Query: 220 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKL 279
P Q +FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L
Sbjct: 200 PEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEAL 258
Query: 280 NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNK 339
L+A DF+ +IFV++ + E+ + L + S ++ M+Q R + K+G
Sbjct: 259 VRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRL 318
Query: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSD 399
IL+ATD+ RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + +
Sbjct: 319 DILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERR 377
Query: 400 ILNQVSKFMFLLI 412
+L + + M L I
Sbjct: 378 LLRNIERTMKLTI 390
>gi|66802312|ref|XP_629938.1| hypothetical protein DDB_G0291804 [Dictyostelium discoideum AX4]
gi|74896805|sp|Q54E49.1|DDX6_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx6; AltName:
Full=DEAD box protein 6
gi|60463332|gb|EAL61523.1| hypothetical protein DDB_G0291804 [Dictyostelium discoideum AX4]
Length = 423
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 142/390 (36%), Positives = 219/390 (56%), Gaps = 22/390 (5%)
Query: 6 DNEYEDEL-LDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDS 64
D+ ++ +L L +E Q D AT+ N F D LK +LLR I +
Sbjct: 22 DDNWKSQLKLPPRDERRQTEDVTATEGND--------------FDDLHLKRDLLRGIFEK 67
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
G+ PS +Q + IP A+ G D++ +AK+G GKTA F++ L++T+P + L+L TR
Sbjct: 68 GYVKPSPIQEKAIPIALAGRDIMARAKNGTGKTASFLIPALEKTDPTKDVIQVLILVPTR 127
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARD 183
ELA Q + Y+ +++V GG ++K D+++ P I+V TPGR+L LA+
Sbjct: 128 ELALQTSQVCKELGKYM-NVQVMASTGGTSLK--DDIMRLYNPVHILVATPGRVLDLAQK 184
Query: 184 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF 243
+L N I+DE DK+L S + + V+++ P +Q+++FSAT ++ + +
Sbjct: 185 NVANLSNCHTMIMDEADKLL-SQEFQPLVEQLINFLPQQRQILLFSATFPVTVKSFKEHY 243
Query: 244 MQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAE 303
+Q EI + +E LTL G+ Q+Y + E +K LN L L NQ +IF SV+R
Sbjct: 244 LQQAFEINLMEE--LTLKGVTQYYAFVEERQKIHCLNTLFSKLQINQSIIFCNSVNRVEL 301
Query: 304 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 363
L K + E + IH+ M Q R + F+ G R LV++DL RGIDI+ VN+VIN+
Sbjct: 302 LAKKITELGYSCFFIHAKMVQAHRNRVFHDFRNGACRNLVSSDLFTRGIDIQDVNVVINF 361
Query: 364 DMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
D P ++TYLHR+GR+GRFG GLAI ++
Sbjct: 362 DFPKHSETYLHRIGRSGRFGHLGLAINLIT 391
>gi|366160413|ref|ZP_09460275.1| ATP-dependent RNA helicase DeaD [Escherichia sp. TW09308]
Length = 627
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 202/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L LQ
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|451966446|ref|ZP_21919699.1| ATP-dependent RNA helicase DeaD [Edwardsiella tarda NBRC 105688]
gi|451314747|dbj|GAC65061.1| ATP-dependent RNA helicase DeaD [Edwardsiella tarda NBRC 105688]
Length = 638
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 133/365 (36%), Positives = 203/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D L ++ A+ D G+E PS +Q CIP + G DV+ A++G GKTA F L L
Sbjct: 8 FADLGLAAPIIEALNDLGYEKPSPIQAACIPHLLNGRDVLGMAQTGSGKTAAFSLPLLNN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P+ LVL TRELA Q+ FS +L I V YGG + L+ + P
Sbjct: 68 IDPSLKAPQVLVLAPTRELAVQVAEAMTDFSKHLHGINVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + LSL ++R +LDE D+ML + DV+ I P + Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLSLASLRGLVLDEADEMLR-MGFIEDVETIMAQIPAEHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM +P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMNEPQEVRIQSSVT-TRPDISQSYWTVYGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERNGYSSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P A++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDAESYVHRIGRTGRAGRAGRALLFVDN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|170100080|ref|XP_001881258.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164643937|gb|EDR08188.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 442
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 140/347 (40%), Positives = 202/347 (58%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D L+ ELL I ++GFE PS +Q E IP A+ D++ +AK+G GKTA FV+ +LQQ
Sbjct: 30 FEDMFLRRELLMGIFEAGFEKPSPIQEEAIPIALTKRDILARAKNGTGKTAAFVIPSLQQ 89
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
+ ++ AL+L TRELA Q + ++ ++V V GG +K D+L+ +E
Sbjct: 90 IDITKNKIQALLLVPTRELALQTSQVCKTLGKHM-GVQVMVTTGGTTLK--DDILRLSES 146
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
++VGTPGRIL LA L F++DE DK+L S + ++++ P ++QVM
Sbjct: 147 VHVLVGTPGRILDLAGKNVADLTECPVFVMDEADKLL-SPEFAPVMEQLLSYLPTERQVM 205
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K M P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 206 LFSATFPMIVKDFKDKHMNSPYEINLMDE--LTLRGVTQYYAYVEERQKVHCLNTLFSKL 263
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q R + F+ G R LV +D
Sbjct: 264 QINQSIIFCNSTNRVELLAKKVTELGYSCFYSHAKMLQSHRNRVFHDFRNGVCRNLVCSD 323
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +++TYLHR+GR+GRFG GLAI V+
Sbjct: 324 LLTRGIDIQAVNVVINFDFPKNSETYLHRIGRSGRFGHLGLAINLVT 370
>gi|389806352|ref|ZP_10203483.1| DNA/RNA helicase [Rhodanobacter thiooxydans LCS2]
gi|388445572|gb|EIM01636.1| DNA/RNA helicase [Rhodanobacter thiooxydans LCS2]
Length = 643
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 129/349 (36%), Positives = 202/349 (57%), Gaps = 3/349 (0%)
Query: 45 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLST 104
SSGF L P++LR + D G+E PS +Q IP + G DV+ QA++G GKTA F L
Sbjct: 12 SSGFGALALHPDVLRVLADVGYESPSPIQAATIPPLLEGRDVLGQAQTGTGKTAAFALPI 71
Query: 105 LQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKN 164
L + E G+ ALVL TRELA Q+ F+ ++ +LP +V YGG + LK
Sbjct: 72 LSRIERKAGKPQALVLAPTRELAIQVAEAFQTYAAHLPGFQVLPIYGGQSYGPQLHSLKR 131
Query: 165 ECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQ 224
+VVGTPGR++ L L +++ +LDE D+ML + DV+++ + TP +Q
Sbjct: 132 GV-HVVVGTPGRVIDHLDKGTLDLSELKYLVLDEADEMLR-MGFIDDVEKVLQATPPQRQ 189
Query: 225 VMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLD 284
V +FSAT+ +IR + ++ ++DP+E+ + + T + Q Y +S + K L +L+
Sbjct: 190 VALFSATMPTQIRKIAQRHLKDPVEVTIKS-STTTAANIHQRYWFVSGMHKLDALTRILE 248
Query: 285 ALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVA 344
A F+ ++IF ++ EL + L + I+ ++Q +R + K+G ILVA
Sbjct: 249 AEPFDAMIIFARTKQATEELAEKLQARGLAAAAINGDIAQPQRERVIQQLKDGKLDILVA 308
Query: 345 TDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
TD+ RG+D+ER++ V+NYD+P ++Y+HR+GR GR G G AI FVS
Sbjct: 309 TDVAARGLDVERISHVLNYDIPYDTESYVHRIGRTGRAGRSGEAILFVS 357
>gi|331679243|ref|ZP_08379915.1| ATP-dependent RNA helicase DeaD [Escherichia coli H591]
gi|331073308|gb|EGI44631.1| ATP-dependent RNA helicase DeaD [Escherichia coli H591]
Length = 651
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 205/373 (54%), Gaps = 4/373 (1%)
Query: 40 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 99
Y+ + F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA
Sbjct: 22 YMAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAA 81
Query: 100 FVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHK 159
F L LQ +P LVL TRELA Q+ FS ++ + V YGG +
Sbjct: 82 FSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQL 141
Query: 160 DLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
L+ + PQIVVGTPGR+L + L L + +LDE D+ML + DV+ I
Sbjct: 142 RALR-QGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQI 199
Query: 220 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKL 279
P Q +FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L
Sbjct: 200 PEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEAL 258
Query: 280 NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNK 339
L+A DF+ +IFV++ + E+ + L + S ++ M+Q R + K+G
Sbjct: 259 VRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRL 318
Query: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSD 399
IL+ATD+ RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + +
Sbjct: 319 DILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERR 377
Query: 400 ILNQVSKFMFLLI 412
+L + + M L I
Sbjct: 378 LLRNIERTMKLTI 390
>gi|321479177|gb|EFX90133.1| hypothetical protein DAPPUDRAFT_300157 [Daphnia pulex]
Length = 404
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 141/362 (38%), Positives = 207/362 (57%), Gaps = 8/362 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F L+ +LLR I GFE PS +Q I I G DVI QA+SG GKTA F +S LQ
Sbjct: 33 FDSMGLREDLLRGIYAYGFEKPSAIQQRAIAPVIKGRDVIAQAQSGTGKTATFSISILQS 92
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
E + LVL TRELA QI Y+ +++ GG N+ +D+ K +
Sbjct: 93 LEIQTRETQILVLSPTRELAVQIQKVILALGDYM-NVQCHACIGGTNV--GEDVRKLDYG 149
Query: 168 Q-IVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
Q IV GTPGR+ + R + L ++++ +LDE D+ML + + ++++ P QV+
Sbjct: 150 QHIVSGTPGRVFDMIRRRTLRTRSIKMLVLDEADEMLNK-GFKEQIYDVYRYLPPATQVV 208
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDA 285
+ SATL EI + KFM DP+ I V + +LTL G+ Q ++ + E K L DL D
Sbjct: 209 LLSATLPHEILEMTSKFMTDPIRILVKRD-ELTLEGIKQFFVAVEREEWKFDTLCDLYDT 267
Query: 286 LDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVAT 345
L Q VIF + + L + + E NF +H M Q+ER T K F+ G R+L+ T
Sbjct: 268 LTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERDTIMKEFRNGQSRVLITT 327
Query: 346 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVS 405
D+ RGID+++V++VINYD+P++ + Y+HR+GR+GRFG KG+AI FV + D IL +
Sbjct: 328 DVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKN-DDIRILRDIE 386
Query: 406 KF 407
++
Sbjct: 387 QY 388
>gi|320589959|gb|EFX02415.1| eukaryotic initiation factor 4a-12 [Grosmannia clavigera kw1407]
Length = 403
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 142/376 (37%), Positives = 214/376 (56%), Gaps = 14/376 (3%)
Query: 28 ATKANGEAAKKGYVGIHSS-------GFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQA 80
A+ +NG+ V + +S F LK LLR I G+E PS VQ I Q
Sbjct: 4 ASGSNGKGKLDDRVDLTTSKEVKVFPTFESMSLKENLLRGIYAYGYETPSAVQSRAIVQV 63
Query: 81 ILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTY 140
G D I QA+SG GKTA F +S LQ + ALVL TRELA QI + Y
Sbjct: 64 CKGRDTIAQAQSGTGKTATFSISMLQVINTASRETQALVLSPTRELATQIQSVVKALGDY 123
Query: 141 LPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKNVRHFILDEC 199
+ +++ GG N+ +D+ K ++ IV GTPGR+ + R + L +N++ +LDE
Sbjct: 124 M-NVQCHACIGGTNV--GEDIRKLDQGQHIVSGTPGRVADMIRRRHLRTRNIKMLVLDEA 180
Query: 200 DKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLT 259
D++L R + E+++ P QV++ SATL +++ + KFM DP+ I V + +LT
Sbjct: 181 DELLNQ-GFREQIYEVYRYLPPATQVVVVSATLPQDVLEMTYKFMTDPVRILVKRD-ELT 238
Query: 260 LHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICI 318
L GL Q++I + + E K L DL D L Q VIF + + L + E NF +
Sbjct: 239 LEGLKQYFIAVEKEEWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMRESNFTVSSM 298
Query: 319 HSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGR 378
H M Q+ER + + F++ N R+L++TD+ RGID+++V++VINYD+P + + Y+HR+GR
Sbjct: 299 HGDMPQKERDSIMQDFRQFNTRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGR 358
Query: 379 AGRFGTKGLAITFVSS 394
+GRFG KG+AI FV++
Sbjct: 359 SGRFGRKGVAINFVTN 374
>gi|110807031|ref|YP_690551.1| ATP-dependent RNA helicase DeaD [Shigella flexneri 5 str. 8401]
gi|157154820|ref|YP_001464636.1| ATP-dependent RNA helicase DeaD [Escherichia coli E24377A]
gi|157162647|ref|YP_001459965.1| ATP-dependent RNA helicase DeaD [Escherichia coli HS]
gi|187731310|ref|YP_001881921.1| ATP-dependent RNA helicase DeaD [Shigella boydii CDC 3083-94]
gi|188491860|ref|ZP_02999130.1| cold-shock DEAD box protein A [Escherichia coli 53638]
gi|237706085|ref|ZP_04536566.1| cold-shock DEAD-box protein A [Escherichia sp. 3_2_53FAA]
gi|293412537|ref|ZP_06655260.1| conserved hypothetical protein [Escherichia coli B354]
gi|331643862|ref|ZP_08344993.1| cold-shock DEAD-box protein A [Escherichia coli H736]
gi|331648963|ref|ZP_08350051.1| cold-shock DEAD-box protein A [Escherichia coli M605]
gi|331674700|ref|ZP_08375459.1| cold-shock DEAD-box protein A [Escherichia coli TA280]
gi|332280007|ref|ZP_08392420.1| cold-shock DEAD-box protein A [Shigella sp. D9]
gi|384544759|ref|YP_005728823.1| cold-shock DEAD-box protein A [Shigella flexneri 2002017]
gi|386601190|ref|YP_006102696.1| cold-shock DEAD box protein A [Escherichia coli IHE3034]
gi|424839416|ref|ZP_18264053.1| ATP-dependent RNA helicase DeaD [Shigella flexneri 5a str. M90T]
gi|26110171|gb|AAN82357.1|AE016767_117 Cold-shock DEAD-box protein A [Escherichia coli CFT073]
gi|110616579|gb|ABF05246.1| inducible ATP-independent RNA helicase [Shigella flexneri 5 str.
8401]
gi|157068327|gb|ABV07582.1| cold-shock DEAD box protein A [Escherichia coli HS]
gi|157076850|gb|ABV16558.1| cold-shock DEAD box protein A [Escherichia coli E24377A]
gi|187428302|gb|ACD07576.1| cold-shock DEAD box protein A [Shigella boydii CDC 3083-94]
gi|188487059|gb|EDU62162.1| cold-shock DEAD box protein A [Escherichia coli 53638]
gi|226899125|gb|EEH85384.1| cold-shock DEAD-box protein A [Escherichia sp. 3_2_53FAA]
gi|281602546|gb|ADA75530.1| Cold-shock DEAD-box protein A [Shigella flexneri 2002017]
gi|291469308|gb|EFF11799.1| conserved hypothetical protein [Escherichia coli B354]
gi|294492243|gb|ADE90999.1| cold-shock DEAD box protein A [Escherichia coli IHE3034]
gi|331037333|gb|EGI09557.1| cold-shock DEAD-box protein A [Escherichia coli H736]
gi|331042710|gb|EGI14852.1| cold-shock DEAD-box protein A [Escherichia coli M605]
gi|331068139|gb|EGI39535.1| cold-shock DEAD-box protein A [Escherichia coli TA280]
gi|332102359|gb|EGJ05705.1| cold-shock DEAD-box protein A [Shigella sp. D9]
gi|383468468|gb|EID63489.1| ATP-dependent RNA helicase DeaD [Shigella flexneri 5a str. M90T]
Length = 651
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 205/373 (54%), Gaps = 4/373 (1%)
Query: 40 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 99
Y+ + F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA
Sbjct: 22 YMAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAA 81
Query: 100 FVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHK 159
F L LQ +P LVL TRELA Q+ FS ++ + V YGG +
Sbjct: 82 FSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQL 141
Query: 160 DLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
L+ + PQIVVGTPGR+L + L L + +LDE D+ML + DV+ I
Sbjct: 142 RALR-QGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQI 199
Query: 220 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKL 279
P Q +FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L
Sbjct: 200 PEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEAL 258
Query: 280 NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNK 339
L+A DF+ +IFV++ + E+ + L + S ++ M+Q R + K+G
Sbjct: 259 VRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRL 318
Query: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSD 399
IL+ATD+ RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + +
Sbjct: 319 DILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERR 377
Query: 400 ILNQVSKFMFLLI 412
+L + + M L I
Sbjct: 378 LLRNIERTMKLTI 390
>gi|218706784|ref|YP_002414303.1| ATP-dependent RNA helicase DeaD [Escherichia coli UMN026]
gi|387608886|ref|YP_006097742.1| ATP-dependent RNA helicase (DEAD-box protein) [Escherichia coli
042]
gi|218433881|emb|CAR14798.1| ATP-dependent RNA helicase [Escherichia coli UMN026]
gi|284923186|emb|CBG36280.1| ATP-dependent RNA helicase (DEAD-box protein) [Escherichia coli
042]
Length = 655
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 205/373 (54%), Gaps = 4/373 (1%)
Query: 40 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 99
Y+ + F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA
Sbjct: 22 YMAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAA 81
Query: 100 FVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHK 159
F L LQ +P LVL TRELA Q+ FS ++ + V YGG +
Sbjct: 82 FSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQL 141
Query: 160 DLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
L+ + PQIVVGTPGR+L + L L + +LDE D+ML + DV+ I
Sbjct: 142 RALR-QGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQI 199
Query: 220 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKL 279
P Q +FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L
Sbjct: 200 PEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEAL 258
Query: 280 NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNK 339
L+A DF+ +IFV++ + E+ + L + S ++ M+Q R + K+G
Sbjct: 259 VRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRL 318
Query: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSD 399
IL+ATD+ RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + +
Sbjct: 319 DILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERR 377
Query: 400 ILNQVSKFMFLLI 412
+L + + M L I
Sbjct: 378 LLRNIERTMKLTI 390
>gi|402081012|gb|EJT76157.1| ATP-dependent RNA helicase fal-1 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 409
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 143/369 (38%), Positives = 212/369 (57%), Gaps = 9/369 (2%)
Query: 41 VGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVF 100
V +H + F LK LLR I G+E PS VQ I Q G D I QA+SG GKTA F
Sbjct: 31 VTVHPT-FESMALKESLLRGIYAYGYESPSAVQSRAIVQVCKGRDTIAQAQSGTGKTATF 89
Query: 101 VLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKD 160
+S LQ + + ALVL TRELA QI Y+ +++ GG N+ +D
Sbjct: 90 SISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVG--ED 146
Query: 161 LLKNECPQ-IVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
+ K + Q IV GTPGR+ + R + L ++++ +LDE D++L R + ++++
Sbjct: 147 IRKLDYGQHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNQ-GFREQIYDVYRYL 205
Query: 220 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL-SELEKNRK 278
P QV++ SATL ++ + KFM DP+ I V + +LTL GL Q++I + E K
Sbjct: 206 PPATQVVVVSATLPYDVLDMTTKFMTDPVRILVKRD-ELTLEGLKQYFIAIEKEDWKFDT 264
Query: 279 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGN 338
L DL D L Q VIF + + L + E NF +H M Q+ER + + F++GN
Sbjct: 265 LCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDMPQKERDSIMQDFRQGN 324
Query: 339 KRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDS 398
R+L++TD+ RGID+++V++VINYD+P + + Y+HR+GR+GRFG KG+AI FV+S D
Sbjct: 325 SRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTS-EDV 383
Query: 399 DILNQVSKF 407
IL + +
Sbjct: 384 RILRDIELY 392
>gi|295660379|ref|XP_002790746.1| ATP-dependent RNA helicase FAL1 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226281299|gb|EEH36865.1| ATP-dependent RNA helicase FAL1 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 408
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 142/362 (39%), Positives = 210/362 (58%), Gaps = 8/362 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK LLR I G+E PS VQ I Q G D I QA+SG GKTA F +S LQ
Sbjct: 27 FEDMHLKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISILQV 86
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ + ALVL TRELA QI Y+ +++ GG N+ +D+ K +
Sbjct: 87 IDTVLRETQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVG--EDIRKLDHG 143
Query: 168 Q-IVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
Q +V GTPGR+ + R + L +N++ +LDE D++L R + ++++ P QV+
Sbjct: 144 QHVVSGTPGRVADMIRRRHLRTRNIKMLVLDEADELLNR-GFREQIYDVYRYLPPATQVV 202
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDA 285
+ SATL ++ + KFM DP+ I V + +LTL GL Q++I + + E K L DL D
Sbjct: 203 VVSATLPYDVLDMTTKFMTDPVRILVKRD-ELTLEGLKQYFIAVEKEEWKFDTLCDLYDT 261
Query: 286 LDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVAT 345
L Q VIF + + L + E NF +H M Q+ER + + F++GN R+L++T
Sbjct: 262 LTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLIST 321
Query: 346 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVS 405
D+ RGID+++V++VINYD+P + + Y+HR+GR+GRFG KG+AI FV+S D IL +
Sbjct: 322 DVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTS-EDVRILRDIE 380
Query: 406 KF 407
+
Sbjct: 381 LY 382
>gi|154302430|ref|XP_001551625.1| hypothetical protein BC1G_09999 [Botryotinia fuckeliana B05.10]
Length = 240
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 123/217 (56%), Positives = 154/217 (70%), Gaps = 20/217 (9%)
Query: 10 EDELLDYEEEDAQA-----------------PDSVATKANGEAAKKG-YVGIHSSGFRDF 51
E++L+DY +E+ ++ N AAKKG YVGIHS+GFR+F
Sbjct: 5 EEDLIDYSDEELATTEAPAPAAGANGGVKGDSGNLTVSGNAAAAKKGSYVGIHSTGFREF 64
Query: 52 LLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPN 111
LLKPELLRAI GFEHPSEVQ CIPQAILG DV+CQAKSG+GKTAVFVL+TLQQ E
Sbjct: 65 LLKPELLRAISWCGFEHPSEVQQVCIPQAILGTDVLCQAKSGLGKTAVFVLTTLQQVEVV 124
Query: 112 PGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKN--ECPQI 169
G+ + LV+CHTRELAYQI +E++RF ++PD+K+ VFYGGV I ++LKN P I
Sbjct: 125 AGETSVLVMCHTRELAYQIRNEYQRFCHFMPDVKIGVFYGGVPISKDVEVLKNPETHPHI 184
Query: 170 VVGTPGRILALARDKDLSLKNVRHFILDECDKMLESL 206
+VGTPGR+ AL RDK L L +V+ F+LDECDKML+ +
Sbjct: 185 IVGTPGRLNALVRDKYLRLNSVKVFVLDECDKMLDQI 221
>gi|209880596|ref|XP_002141737.1| eukaryotic translation initiation factor 4A [Cryptosporidium muris
RN66]
gi|209557343|gb|EEA07388.1| eukaryotic translation initiation factor 4A, putative
[Cryptosporidium muris RN66]
Length = 404
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 138/347 (39%), Positives = 205/347 (59%), Gaps = 5/347 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F L LLR I GFE PS +Q + + G D I QA+SG GKTA FV++ LQ+
Sbjct: 33 FEALNLDGNLLRGIFAYGFEKPSAIQQRGVKPILDGYDTIGQAQSGTGKTATFVIAALQK 92
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ + L+L TRELA QI Y D++ GG +++ + LKN
Sbjct: 93 IDYSLNACQVLLLAPTRELAQQIQKVALALGDYC-DLRCHACVGGTSVRDDMNKLKNGV- 150
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
+VVGTPGR+ + L + +++ FILDE D+ML S + + +IFK P D QV +
Sbjct: 151 HMVVGTPGRVFDMLDKGYLRVDHLKLFILDEADEML-SRGFKLQIHDIFKKLPQDVQVAL 209
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDAL 286
FSAT+ EI + +FM+DP I V E +LTL G+ Q+Y+ + + E K L DL + L
Sbjct: 210 FSATMPNEILHLTTQFMRDPKRILVKQE-ELTLEGIRQYYVAVEKDEWKLATLVDLYETL 268
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
Q +I+ + R L K + + +F C+H M Q++R + F+ G+ R+L+ TD
Sbjct: 269 TIVQAIIYCNTRIRVDRLTKQMTDRDFTCSCMHGDMDQKDREVIMRQFRSGSSRVLITTD 328
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGID+++V++VINYD+P SA+TY+HR+GR+GRFG KG+A+ FV+
Sbjct: 329 LLARGIDVQQVSLVINYDLPVSAETYIHRIGRSGRFGRKGVAVNFVT 375
>gi|145727|gb|AAA23674.1| deaD [Escherichia coli]
Length = 571
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 205/373 (54%), Gaps = 4/373 (1%)
Query: 40 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 99
Y+ + F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA
Sbjct: 17 YMAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAA 76
Query: 100 FVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHK 159
F L LQ +P LVL TRELA Q+ FS ++ + V YGG +
Sbjct: 77 FSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQL 136
Query: 160 DLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
L+ + PQIVVGTPGR+L + L L + +LDE D+ML + DV+ I
Sbjct: 137 RALR-QGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQI 194
Query: 220 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKL 279
P Q +FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L
Sbjct: 195 PEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEAL 253
Query: 280 NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNK 339
L+A DF+ +IFV++ + E+ + L + S ++ M+Q R + K+G
Sbjct: 254 VRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRL 313
Query: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSD 399
IL+ATD+ RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + +
Sbjct: 314 DILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERR 372
Query: 400 ILNQVSKFMFLLI 412
+L + + M L I
Sbjct: 373 LLRNIERTMKLTI 385
>gi|401676931|ref|ZP_10808912.1| ATP-dependent RNA helicase CsdA [Enterobacter sp. SST3]
gi|400215840|gb|EJO46745.1| ATP-dependent RNA helicase CsdA [Enterobacter sp. SST3]
Length = 631
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 202/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L L
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLSGRDVLGMAQTGSGKTAAFSLPLLNN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P+ LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 IDPDLRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPDGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + K+FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITKRFMKEPQEVRIQSSVT-TRPDISQSYWSVYGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|281211648|gb|EFA85810.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 1269
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 142/390 (36%), Positives = 220/390 (56%), Gaps = 22/390 (5%)
Query: 6 DNEYEDEL-LDYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDS 64
DN ++ L L ++E Q D AT+ N F D LK +LLR I +
Sbjct: 15 DNNWKASLVLPPKDERKQTEDVTATEGNE--------------FDDLHLKRDLLRGIFEK 60
Query: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTR 124
G+ PS +Q + IP A+ G D++ +AK+G GKTA F++ L++T+P + L+L TR
Sbjct: 61 GYVKPSPIQEKAIPIALTGKDIMARAKNGTGKTASFLIPALEKTDPTKDYIQVLILVPTR 120
Query: 125 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARD 183
ELA Q + Y+ ++KV GG ++K D+++ E I+V TPGR+L LA+
Sbjct: 121 ELALQTSQVCKELGKYM-NVKVMASTGGTSLK--DDIMRLYETVHILVATPGRVLDLAQK 177
Query: 184 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF 243
+L N I+DE DK+L S + + ++++ P +Q+++FSAT ++ + +
Sbjct: 178 SVANLNNTHTMIMDEADKLL-SPEFQPLIEQLIHFLPAQRQILLFSATFPVTVKAFKEAY 236
Query: 244 MQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAE 303
+Q EI + +E LTL G+ Q+Y + E +K LN L L NQ +IF SV+R
Sbjct: 237 LQKAYEINLMEE--LTLKGVTQYYAFVEERQKIHCLNTLFSKLQINQSIIFCNSVNRVEL 294
Query: 304 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 363
L K + + + IH+ M Q R + F+ G+ R LV++DL RGIDI+ VN+VIN+
Sbjct: 295 LAKKITDLGYSCFYIHAKMLQAHRNRVFHDFRNGHCRNLVSSDLFTRGIDIQDVNVVINF 354
Query: 364 DMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
D P ++TYLHR+GR+GRFG GLAI ++
Sbjct: 355 DFPKHSETYLHRIGRSGRFGHLGLAINLIT 384
>gi|402594788|gb|EJW88714.1| eukaryotic initiation factor 4A [Wuchereria bancrofti]
Length = 413
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 141/389 (36%), Positives = 212/389 (54%), Gaps = 8/389 (2%)
Query: 19 EDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIP 78
E A AP + + + + F + LK LLR I GFE PS +Q I
Sbjct: 17 EAAGAPAPIQAPLDSDGLIESNWEYVCENFDEMGLKENLLRGIYAFGFEKPSAIQQRAII 76
Query: 79 QAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFS 138
DVI QA+SG GKTA F ++ LQ + +V ALV+ TRELA QI
Sbjct: 77 PCTKKRDVIAQAQSGTGKTATFSVAVLQNIDETIPEVQALVMAPTRELAQQIQKVMLSLG 136
Query: 139 TYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDE 198
YL +K GG N++ + L++ +VVGTPGR+ + + L N++ F+LDE
Sbjct: 137 EYL-GVKCHASIGGTNVRDDQRKLESGV-HVVVGTPGRVNDMITRQSLQTNNIKMFVLDE 194
Query: 199 CDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKL 258
D+ML S + + ++FK P D QV++ SAT+ E+ V +FM DP+ I V E +L
Sbjct: 195 ADEML-SRGFKEQIYDVFKCMPSDVQVVLLSATMPSEVLEVTNRFMNDPIRILVKRE-EL 252
Query: 259 TLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICI 318
TL G+ Q YI + E L DL ++ Q VIF + + L + + + C+
Sbjct: 253 TLEGIRQFYINEWKFET---LCDLYSTVNVTQAVIFCNTRRKVDYLAAQMSKEKYTVSCM 309
Query: 319 HSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGR 378
H M Q ER + F+ G+ R+L+ TDL+ RGID+++V++VINYD+P + + Y+HR+GR
Sbjct: 310 HGEMEQNERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHRIGR 369
Query: 379 AGRFGTKGLAITFVSSASDSDILNQVSKF 407
+GRFG KG+AI F++ +D ++ + F
Sbjct: 370 SGRFGRKGVAINFITE-TDMRMMKDIESF 397
>gi|448518907|ref|XP_003867999.1| Fal1 protein [Candida orthopsilosis Co 90-125]
gi|380352338|emb|CCG22564.1| Fal1 protein [Candida orthopsilosis]
Length = 399
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 133/354 (37%), Positives = 208/354 (58%), Gaps = 6/354 (1%)
Query: 41 VGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVF 100
+ +H + F LKPELL+ I GFE PS +Q I Q I G D I QA+SG GKTA F
Sbjct: 22 IKVHRT-FESMKLKPELLKGIYAYGFEAPSAIQSRAIMQIIAGRDTIAQAQSGTGKTATF 80
Query: 101 VLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKD 160
+ L+ + AL+L TRELA QI + + Y+ +I GG N+ +
Sbjct: 81 SIGMLEAIDSKSKDCQALILSPTRELAIQIQNVVQHLGDYM-NIHTYACIGGKNVGMDIK 139
Query: 161 LLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTP 220
L+ + Q+V GTPGR+L + R ++LS ++++ ILDE D++ + + + EI+K P
Sbjct: 140 KLQ-QGQQVVSGTPGRVLDIIRRRNLSTRHIKILILDEADELF-TKGFKEQIYEIYKQLP 197
Query: 221 HDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKL 279
+D QV++ SATL E+ + KF DP++I V + ++L G+ Q+Y++ + + K L
Sbjct: 198 YDTQVVVVSATLPPEVLEMTSKFTTDPVKILVKRD-DVSLVGIKQYYVQCEQEDWKFDTL 256
Query: 280 NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNK 339
DL D L Q VIF + + L + + NF +H M Q+ER + F+ GN
Sbjct: 257 CDLYDNLTITQAVIFCNTKMKVNWLTDQMRKQNFVVSSMHGDMKQDERDSIMSDFRTGNS 316
Query: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
R+L++TD+ RGID++++++VINYD+P+ + Y+HR+GR+GRFG KG AI ++
Sbjct: 317 RVLISTDVWARGIDVQQISLVINYDLPNDKENYIHRIGRSGRFGRKGTAINLIT 370
>gi|392589193|gb|EIW78524.1| DEAD-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 464
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 139/347 (40%), Positives = 203/347 (58%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D L+ +LL I ++GFE PS +Q E IP A+ DV+ +AK+G GKTA FV+ +LQQ
Sbjct: 43 FEDMFLRRDLLMGIFEAGFEKPSPIQEEAIPIALTKRDVLARAKNGTGKTAAFVIPSLQQ 102
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
+ ++ AL+L TRELA Q + ++ ++V V GG +K D+++ E
Sbjct: 103 VDITKNKIQALLLVPTRELALQTSQVCKTLGKHM-GVQVMVTTGGTTLK--DDIMRLGEV 159
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
++VGTPGRIL LA L F++DE DK+L S + ++++ P ++QVM
Sbjct: 160 VHVLVGTPGRILDLAGKNVADLSECPVFVMDEADKLL-SPEFTPVMEQLLAYLPKERQVM 218
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K M++P EI + +E LTL G+ Q+Y L E +K LN L L
Sbjct: 219 LFSATFPMIVKDFKGKHMRNPYEINLMEE--LTLRGVTQYYAYLEEKQKVHCLNTLFSKL 276
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q R + F+ G R LV +D
Sbjct: 277 QINQSIIFCNSTNRVELLAKKVTELGYSCFYSHAKMLQSHRNRVFHDFRHGAFRNLVCSD 336
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG G+AI V+
Sbjct: 337 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGIAINLVT 383
>gi|322831220|ref|YP_004211247.1| DEAD/DEAH box helicase [Rahnella sp. Y9602]
gi|384256388|ref|YP_005400322.1| ATP-dependent RNA helicase DeaD [Rahnella aquatilis HX2]
gi|321166421|gb|ADW72120.1| DEAD/DEAH box helicase domain protein [Rahnella sp. Y9602]
gi|380752364|gb|AFE56755.1| ATP-dependent RNA helicase DeaD [Rahnella aquatilis HX2]
Length = 640
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 130/367 (35%), Positives = 204/367 (55%), Gaps = 4/367 (1%)
Query: 46 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTL 105
+ F D L ++ A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L L
Sbjct: 7 TSFADLGLSAPIISALTDLGYEKPSPIQAECIPHLLSGRDVLGMAQTGSGKTAAFSLPLL 66
Query: 106 QQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE 165
+ + LVL TRELA Q+ FS ++ + V YGG + L+ +
Sbjct: 67 HNIDASLKAPQILVLAPTRELAVQVAEAMTDFSKHMHGVNVVALYGGQRYDVQLRALR-Q 125
Query: 166 CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQV 225
PQ+VVGTPGR+L + L+L N+ +LDE D+ML + DV+ I P + Q
Sbjct: 126 GPQVVVGTPGRLLDHLKRGTLNLSNLSGLVLDEADEMLR-MGFIEDVETIMAQIPAEHQT 184
Query: 226 MMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDA 285
+FSAT+ + IR + ++FM+DP E+ + T + Q Y + L KN L L+A
Sbjct: 185 ALFSATMPEAIRRITRRFMKDPQEVRIQSSVT-TRPDISQSYWSVYGLRKNEALVRFLEA 243
Query: 286 LDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVAT 345
DF+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+AT
Sbjct: 244 EDFDAAIIFVRTKNATLEVAEALERSGYSSAALNGDMNQALREQTLERLKDGRLDILIAT 303
Query: 346 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVS 405
D+ RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L +
Sbjct: 304 DVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIE 362
Query: 406 KFMFLLI 412
+ M L I
Sbjct: 363 RTMKLTI 369
>gi|378701181|ref|YP_005183139.1| ATP-dependent RNA helicase [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|379702541|ref|YP_005244269.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|383497935|ref|YP_005398624.1| ATP-dependent RNA helicase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
gi|422027502|ref|ZP_16373843.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|422032544|ref|ZP_16378653.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|427554272|ref|ZP_18929143.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|427572041|ref|ZP_18933856.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|427592591|ref|ZP_18938657.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|427616656|ref|ZP_18943547.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|427640170|ref|ZP_18948424.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|427657521|ref|ZP_18953171.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
gi|427662839|ref|ZP_18958137.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|427676997|ref|ZP_18962950.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
gi|427800574|ref|ZP_18968309.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm5]
gi|301159830|emb|CBW19349.1| ATP-dependent RNA helicase (dead-box protein) [Salmonella enterica
subsp. enterica serovar Typhimurium str. SL1344]
gi|323131640|gb|ADX19070.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|380464756|gb|AFD60159.1| ATP-dependent RNA helicase (dead-box protein) [Salmonella enterica
subsp. enterica serovar Typhimurium str. 798]
gi|414014721|gb|EKS98561.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|414015727|gb|EKS99527.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|414016148|gb|EKS99932.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|414028815|gb|EKT11982.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|414030469|gb|EKT13568.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|414033317|gb|EKT16275.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|414043932|gb|EKT26399.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|414044450|gb|EKT26893.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
gi|414049456|gb|EKT31667.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|414056979|gb|EKT38753.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
gi|414063264|gb|EKT44430.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm5]
Length = 629
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 131/365 (35%), Positives = 202/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L L
Sbjct: 8 FADLGLKAPILEALTDLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKTAAFSLPLLNN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + +L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRVLR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|424522109|ref|ZP_17966221.1| cold-shock DEAD-box protein A [Escherichia coli TW14301]
gi|429040637|ref|ZP_19105733.1| cold-shock DEAD box protein A [Escherichia coli 96.0932]
gi|445025311|ref|ZP_21341130.1| cold-shock DEAD box protein A [Escherichia coli 7.1982]
gi|390844069|gb|EIP07831.1| cold-shock DEAD-box protein A [Escherichia coli TW14301]
gi|427289938|gb|EKW53437.1| cold-shock DEAD box protein A [Escherichia coli 96.0932]
gi|444636326|gb|ELW09727.1| cold-shock DEAD box protein A [Escherichia coli 7.1982]
Length = 629
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 202/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L LQ
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYIHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|399949664|gb|AFP65322.1| eukaryotic initiation factor 4a [Chroomonas mesostigmatica
CCMP1168]
Length = 403
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 139/363 (38%), Positives = 206/363 (56%), Gaps = 9/363 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D ++ +L+R I GF PSE+Q I + G D+I QA+SG GKTA FV+ TL
Sbjct: 30 FSDMNIRRDLIRGIFKYGFVKPSEIQKRGIMPLVYGKDMIAQAQSGTGKTATFVIGTLHN 89
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK--NE 165
+V ++ TRELAYQI Y+ I V F GG IK DL K +
Sbjct: 90 VNDKLHKVQIMITVPTRELAYQIQLVVRAIGKYM-KIIVQSFIGGTYIK--NDLFKFIKK 146
Query: 166 CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQV 225
P IVVGTPGR++ + + N+ + I+DE D+M S + + +IFK P+ +
Sbjct: 147 VPHIVVGTPGRLIDVMSISNQISNNLVYLIIDEADEMF-SQGFKIQIYKIFKFLPYHCSI 205
Query: 226 MMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLD 284
+FSATL K+I V F++ P++I + E +LTL G+ Q YI + + E K L D+
Sbjct: 206 ALFSATLPKDILRVIALFIEKPVKILIKKE-ELTLEGIKQFYIPVDKEEWKIEALYDIYK 264
Query: 285 ALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVA 344
++ Q +I+V + RA L + + +FP +H M Q R K F+ G R L+A
Sbjct: 265 SIPVEQSIIYVNTTKRAEWLGNAMKQADFPIGYLHGDMEQSNRTAILKNFRSGKFRFLIA 324
Query: 345 TDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
TDL+ RGIDI++VN V+N+D+P + Y+HR+GR+GRFG KG+AI F++ D +IL ++
Sbjct: 325 TDLLSRGIDIKKVNFVLNFDLPSIKENYIHRIGRSGRFGKKGIAINFLTR-QDINILREI 383
Query: 405 SKF 407
+
Sbjct: 384 ESY 386
>gi|420294282|ref|ZP_14796396.1| cold-shock DEAD-box protein A [Escherichia coli TW11039]
gi|390794740|gb|EIO62030.1| cold-shock DEAD-box protein A [Escherichia coli TW11039]
Length = 629
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 202/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L LQ
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGSLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|353242954|emb|CCA74550.1| probable ATP-dependent RNA helicase DHH1 [Piriformospora indica DSM
11827]
Length = 540
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 138/347 (39%), Positives = 202/347 (58%), Gaps = 6/347 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
+ D L+ ELL I + GFE PS +Q IP A+ D++ +AK+G GKTA FV+ +LQQ
Sbjct: 43 WEDMYLRRELLMGIFEEGFERPSPIQESSIPIALSKRDILARAKNGTGKTAAFVIPSLQQ 102
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
++ AL+L TRELA Q + ++ ++V V GG +K D+L+ NE
Sbjct: 103 VNTAIPKIQALLLVPTRELALQTSQVAKNLGKHIAGLQVMVSTGGTTLK--DDILRLNEP 160
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
++VGTPGRIL LA L R F++DE DK+L S + ++ + + P ++QVM
Sbjct: 161 VHVLVGTPGRILDLASKGVADLSECRVFVMDEADKLL-SPEFTPIMENLLGLLPEERQVM 219
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ +K M+ P EI + +E LTL G+ Q+Y + E +K LN L L
Sbjct: 220 LFSATFPLIVKDFKEKHMRKPHEINLMEE--LTLKGVTQYYAFVEERQKVHCLNTLFSKL 277
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q R + F+ G R LV +D
Sbjct: 278 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMLQSHRNRVFHDFRNGVCRNLVCSD 337
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +++TYLHR+GR+GRFG GLAI ++
Sbjct: 338 LLTRGIDIQAVNVVINFDFPKNSETYLHRIGRSGRFGHLGLAINLLT 384
>gi|170578019|ref|XP_001894230.1| eukaryotic initiation factor 4A [Brugia malayi]
gi|158599270|gb|EDP36940.1| eukaryotic initiation factor 4A, putative [Brugia malayi]
Length = 413
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 141/389 (36%), Positives = 212/389 (54%), Gaps = 8/389 (2%)
Query: 19 EDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIP 78
E A AP + + + + F + LK LLR I GFE PS +Q I
Sbjct: 17 EAAGAPAPIQAPLDSDGLIESNWEYVCENFDEMGLKENLLRGIYAFGFEKPSAIQQRAII 76
Query: 79 QAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFS 138
DVI QA+SG GKTA F ++ LQ + +V ALV+ TRELA QI
Sbjct: 77 PCTKKRDVIAQAQSGTGKTATFSVAVLQNIDETIPEVQALVMAPTRELAQQIQKVMLSLG 136
Query: 139 TYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDE 198
YL +K GG N++ + L++ +VVGTPGR+ + + L N++ F+LDE
Sbjct: 137 EYL-GVKCHASIGGTNVRDDQRKLESGV-HVVVGTPGRVNDMITRQSLQTNNIKMFVLDE 194
Query: 199 CDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKL 258
D+ML S + + ++FK P D QV++ SAT+ E+ V +FM DP+ I V E +L
Sbjct: 195 ADEML-SRGFKEQIYDVFKCMPSDVQVVLLSATMPSEVLEVTNRFMNDPIRILVKRE-EL 252
Query: 259 TLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICI 318
TL G+ Q YI + E L DL ++ Q VIF + + L + + + C+
Sbjct: 253 TLEGIRQFYINEWKFET---LCDLYSTVNVTQAVIFCNTRRKVDYLAAQMSKEKYTVSCM 309
Query: 319 HSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGR 378
H M Q ER + F+ G+ R+L+ TDL+ RGID+++V++VINYD+P + + Y+HR+GR
Sbjct: 310 HGEMEQNERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHRIGR 369
Query: 379 AGRFGTKGLAITFVSSASDSDILNQVSKF 407
+GRFG KG+AI F++ +D ++ + F
Sbjct: 370 SGRFGRKGVAINFITE-TDMRMMKDIESF 397
>gi|433551949|ref|ZP_20507989.1| Cold-shock DEAD-box protein A [Yersinia enterocolitica IP 10393]
gi|431787247|emb|CCO71029.1| Cold-shock DEAD-box protein A [Yersinia enterocolitica IP 10393]
Length = 657
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 130/372 (34%), Positives = 205/372 (55%), Gaps = 4/372 (1%)
Query: 46 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTL 105
+ F D L +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L L
Sbjct: 7 TSFADLGLSAPILSALTDLGYEKPSPIQLECIPHLLNGRDVLGMAQTGSGKTAAFGLPLL 66
Query: 106 QQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE 165
+P+ LVL TRELA Q+ FS ++ + V YGG + L+ +
Sbjct: 67 HNIDPSLKAPQVLVLAPTRELAIQVAEALSSFSKHMNGVNVVALYGGQRYDVQLRALR-Q 125
Query: 166 CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQV 225
PQ+VVGTPGR+L + L+L N+ +LDE D+ML + DV+ I P + Q
Sbjct: 126 GPQVVVGTPGRLLDHLKRGTLNLSNLSGLVLDEADEMLR-MGFIEDVENILAQIPAEHQT 184
Query: 226 MMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDA 285
+FSAT+ + IR + ++FM++P E+ + + T + Q Y + + KN L L+A
Sbjct: 185 ALFSATMPEAIRRITRRFMKEPQEVRIQS-SMTTRPDISQSYWVVDGVRKNDALVRFLEA 243
Query: 286 LDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVAT 345
DF+ +IFV++ + E+ + L + S ++ M+Q R + K G IL+AT
Sbjct: 244 EDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQAAREQTLERLKNGRLDILIAT 303
Query: 346 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVS 405
D+ RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + +L +
Sbjct: 304 DVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVDR-RERRLLQNIE 362
Query: 406 KFMFLLIGSFQC 417
+ M + I Q
Sbjct: 363 RTMKMTIPPVQL 374
>gi|255955551|ref|XP_002568528.1| Pc21g15180 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590239|emb|CAP96415.1| Pc21g15180 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 416
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 136/349 (38%), Positives = 207/349 (59%), Gaps = 7/349 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK LLR + G+E PS VQ I Q G D I QA+SG GKTA F +STLQ
Sbjct: 27 FEDMHLKESLLRGVYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFAISTLQI 86
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ + ALVL TRELA QI Y+ +++ GG N+ +D+ K +
Sbjct: 87 IDTVVRETQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVG--EDIRKLDYG 143
Query: 168 Q-IVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
Q +V GTPGR+ + R ++L ++++ +LDE D++L R + ++++ P QV+
Sbjct: 144 QHVVSGTPGRVADMIRRRNLRTRHIKMLVLDEADELLNR-GFREQIYDVYRYLPPATQVV 202
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDA 285
+ SATL ++ + KFM DP+ + V + +LTL G+ Q++I + + E K L DL D
Sbjct: 203 VVSATLPYDVLDMTTKFMTDPVRVLVKRD-ELTLEGIKQYFIAVEKEEWKFDTLCDLYDT 261
Query: 286 LDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVAT 345
L Q VIF + + L + E NF +H M Q+ER + + F++GN R+L++T
Sbjct: 262 LTITQAVIFCNTRRKVDWLADKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLIST 321
Query: 346 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSS 394
D+ RGID+++V++VINYD+P + + Y+HR+GR+GRFG KG+AI FV+S
Sbjct: 322 DVWARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTS 370
>gi|389629430|ref|XP_003712368.1| ATP-dependent RNA helicase fal-1 [Magnaporthe oryzae 70-15]
gi|152032454|sp|A4QU31.1|FAL1_MAGO7 RecName: Full=ATP-dependent RNA helicase FAL1
gi|351644700|gb|EHA52561.1| ATP-dependent RNA helicase fal-1 [Magnaporthe oryzae 70-15]
gi|440465456|gb|ELQ34776.1| ATP-dependent RNA helicase fal-1 [Magnaporthe oryzae Y34]
gi|440487675|gb|ELQ67450.1| ATP-dependent RNA helicase fal-1 [Magnaporthe oryzae P131]
Length = 401
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 143/369 (38%), Positives = 212/369 (57%), Gaps = 9/369 (2%)
Query: 41 VGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVF 100
V +H + F LK LLR I G+E PS VQ I Q G D I QA+SG GKTA F
Sbjct: 23 VTVHPT-FESMALKESLLRGIYAYGYESPSAVQSRAIVQVCKGRDTIAQAQSGTGKTATF 81
Query: 101 VLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKD 160
+S LQ + + ALVL TRELA QI Y+ +++ GG N+ +D
Sbjct: 82 SISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVG--ED 138
Query: 161 LLKNECPQ-IVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
+ K + Q IV GTPGR+ + R + L ++++ +LDE D++L R + ++++
Sbjct: 139 IRKLDYGQHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNQ-GFREQIYDVYRYL 197
Query: 220 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL-SELEKNRK 278
P QV++ SATL ++ + KFM DP+ I V + +LTL GL Q++I + E K
Sbjct: 198 PPATQVVVVSATLPYDVLDMTTKFMTDPVRILVKRD-ELTLEGLKQYFIAIEKEDWKFDT 256
Query: 279 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGN 338
L DL D L Q VIF + + L + E NF +H M Q+ER + + F++GN
Sbjct: 257 LCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDMPQKERDSIMQDFRQGN 316
Query: 339 KRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDS 398
R+L++TD+ RGID+++V++VINYD+P + + Y+HR+GR+GRFG KG+AI FV+S D
Sbjct: 317 SRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTS-EDV 375
Query: 399 DILNQVSKF 407
IL + +
Sbjct: 376 RILRDIELY 384
>gi|432810896|ref|ZP_20044755.1| cold-shock DEAD box protein A [Escherichia coli KTE101]
gi|431360636|gb|ELG47238.1| cold-shock DEAD box protein A [Escherichia coli KTE101]
Length = 629
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 202/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L LQ
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|71747184|ref|XP_822647.1| ATP-dependent DEAD-box RNA helicase [Trypanosoma brucei TREU927]
gi|70832315|gb|EAN77819.1| ATP-dependent DEAD-box RNA helicase, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
gi|261332418|emb|CBH15413.1| ATP-dependent DEAD-box RNA helicase, putative [Trypanosoma brucei
gambiense DAL972]
Length = 406
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 134/347 (38%), Positives = 205/347 (59%), Gaps = 6/347 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F ++ L+ EL I + GFE PS VQ E IP A+ G DV+ +AK+G GKTA FV+ L++
Sbjct: 33 FEEYGLRRELQMGIFEKGFERPSPVQEEAIPVALQGKDVLARAKNGTGKTASFVIPVLEK 92
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
+ + AL++ TRELA Q + ++ ++V V GG ++ D+L+
Sbjct: 93 VDTQLPHIQALLMVPTRELALQTAQVTKELGKHITGLEVMVTTGGTTLR--DDILRLQSV 150
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
++V TPGR + LA L + R +LDE DK+L S + +++++ P +Q +
Sbjct: 151 VHVLVATPGRAVDLASKGTAKLDHCRIIVLDEADKLL-SQEFTSLMRDLYGFLPKGRQSL 209
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K++++P EI + +E LTL G+ Q+Y + E +K LN L + L
Sbjct: 210 LFSATFPVTVKDFADKYLRNPYEINLMEE--LTLRGVTQYYAFVEERQKIHCLNTLFNRL 267
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF SV+R L K + + + IH+ M Q+ R + F+EG+ R LV +D
Sbjct: 268 QINQSIIFCNSVNRVELLAKKITQLGYSCYYIHARMQQQHRNRVFHDFREGHCRNLVCSD 327
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P A+TYLHR+GR+GRFG GLAI FV+
Sbjct: 328 LITRGIDIQAVNVVINFDFPKYAETYLHRIGRSGRFGHLGLAINFVT 374
>gi|432373739|ref|ZP_19616771.1| cold-shock DEAD box protein A [Escherichia coli KTE11]
gi|430893924|gb|ELC16226.1| cold-shock DEAD box protein A [Escherichia coli KTE11]
Length = 627
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 202/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L LQ
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVIALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|407697074|ref|YP_006821862.1| ATP-dependent RNA helicase, DEAD box family [Alcanivorax dieselolei
B5]
gi|407254412|gb|AFT71519.1| ATP-dependent RNA helicase, DEAD box family [Alcanivorax dieselolei
B5]
Length = 454
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/361 (36%), Positives = 204/361 (56%), Gaps = 9/361 (2%)
Query: 52 LLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPN 111
L+ P LLRA+ + G++ PS +Q + IP + G DV+ A++G GKTA F L LQ+ EP
Sbjct: 8 LIDP-LLRAVAEQGYDRPSPIQAQAIPAVLGGSDVMAAAQTGTGKTAGFTLPLLQRLEPG 66
Query: 112 -PG---QVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
P QV ALVL TRELA Q+ + YLP ++ AV +GGVNI + L+
Sbjct: 67 KPAASRQVRALVLTPTRELAAQVGESVAEYGKYLPALRSAVVFGGVNINPQINRLRGGV- 125
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
++V TPGR+L L + K +S + +LDE D+ML+ + D++++ ++ P +Q +M
Sbjct: 126 DVLVATPGRLLDLYQQKAMSFDQLEILVLDEADRMLD-MGFIHDIRKVLRLLPKQRQTLM 184
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT S EIR + K ++ P EI + T + Q + + + K L L+
Sbjct: 185 FSATFSNEIRTLAKTLVRSPKEIDISPRNS-TAERVRQWVVTVDKRHKAALLTHLIGEQQ 243
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
+ QV++F ++ A L K L ++ IH SQ R GFK G+ R LVATD+
Sbjct: 244 WFQVLVFTRTKHGANRLAKQLESAGIEAVAIHGNKSQNARTRALAGFKSGDVRALVATDI 303
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+DI+++ V+N+D+P+ A+ Y+HR+GR GR G G A++ V S D +L + +
Sbjct: 304 AARGLDIDQLPQVVNFDLPNVAEDYVHRIGRTGRAGADGEAVSLV-SGEDQKLLKGIERL 362
Query: 408 M 408
+
Sbjct: 363 I 363
>gi|400536166|ref|ZP_10799701.1| ATP-dependent rna helicase, dead/deah box family protein
[Mycobacterium colombiense CECT 3035]
gi|400330248|gb|EJO87746.1| ATP-dependent rna helicase, dead/deah box family protein
[Mycobacterium colombiense CECT 3035]
Length = 567
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 126/349 (36%), Positives = 194/349 (55%), Gaps = 3/349 (0%)
Query: 45 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLST 104
S+ F D + P +LRAI D G+E P+ +Q IP + G DV+ A++G GKTA F +
Sbjct: 12 STTFADLQINPSVLRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPI 71
Query: 105 LQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKN 164
L + + ALVL TRELA Q+ F R+ +LP I V YGG + + L+
Sbjct: 72 LSKIDVTSTATQALVLAPTRELALQVAEAFSRYGAHLPKINVLPIYGGSSYSVQLAGLRR 131
Query: 165 ECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQ 224
+VVGTPGR++ L L +V + +LDE D+ML ++ +V I TP KQ
Sbjct: 132 GA-HVVVGTPGRVIDHLERGTLDLSHVDYLVLDEADEML-TMGFAEEVDRILSETPEYKQ 189
Query: 225 VMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLD 284
V +FSAT+ IR + K++ DP+E+ + T + Q YI+++ K L +L+
Sbjct: 190 VALFSATMPPAIRKITTKYLHDPLEVSTKAKTA-TAENISQRYIQVAGPRKMDALTRVLE 248
Query: 285 ALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVA 344
F +++FV++ E+ + L F + I+ + Q +R K+G+ ILVA
Sbjct: 249 VEPFEAMIVFVRTKQATEEVAERLRARGFSAAAINGDIPQGQRERTVAALKDGSIDILVA 308
Query: 345 TDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
TD+ RG+D+ER++ V+NYD+P ++Y+HR+GR GR G G A+ FVS
Sbjct: 309 TDVAARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGTALLFVS 357
>gi|38704144|ref|NP_312070.2| ATP-dependent RNA helicase DeaD [Escherichia coli O157:H7 str.
Sakai]
gi|161367519|ref|NP_289738.2| ATP-dependent RNA helicase DeaD [Escherichia coli O157:H7 str.
EDL933]
gi|168749243|ref|ZP_02774265.1| cold-shock DEAD box protein A [Escherichia coli O157:H7 str.
EC4113]
gi|168754142|ref|ZP_02779149.1| cold-shock DEAD box protein A [Escherichia coli O157:H7 str.
EC4401]
gi|168762127|ref|ZP_02787134.1| cold-shock DEAD box protein A [Escherichia coli O157:H7 str.
EC4501]
gi|168769579|ref|ZP_02794586.1| cold-shock DEAD box protein A [Escherichia coli O157:H7 str.
EC4486]
gi|168773172|ref|ZP_02798179.1| cold-shock DEAD box protein A [Escherichia coli O157:H7 str.
EC4196]
gi|168781305|ref|ZP_02806312.1| cold-shock DEAD box protein A [Escherichia coli O157:H7 str.
EC4076]
gi|168786046|ref|ZP_02811053.1| cold-shock DEAD box protein A [Escherichia coli O157:H7 str. EC869]
gi|168797762|ref|ZP_02822769.1| cold-shock DEAD box protein A [Escherichia coli O157:H7 str. EC508]
gi|195938382|ref|ZP_03083764.1| ATP-dependent RNA helicase DeaD [Escherichia coli O157:H7 str.
EC4024]
gi|208806131|ref|ZP_03248468.1| cold-shock DEAD box protein A [Escherichia coli O157:H7 str.
EC4206]
gi|208812019|ref|ZP_03253348.1| cold-shock DEAD box protein A [Escherichia coli O157:H7 str.
EC4045]
gi|208818284|ref|ZP_03258604.1| cold-shock DEAD box protein A [Escherichia coli O157:H7 str.
EC4042]
gi|209400297|ref|YP_002272633.1| ATP-dependent RNA helicase DeaD [Escherichia coli O157:H7 str.
EC4115]
gi|217327948|ref|ZP_03444031.1| cold-shock DEAD box protein A [Escherichia coli O157:H7 str.
TW14588]
gi|254795113|ref|YP_003079950.1| ATP-dependent RNA helicase DeaD [Escherichia coli O157:H7 str.
TW14359]
gi|261228174|ref|ZP_05942455.1| ATP-dependent RNA helicase DeaD [Escherichia coli O157:H7 str.
FRIK2000]
gi|261255030|ref|ZP_05947563.1| ATP-dependent RNA helicase DeaD [Escherichia coli O157:H7 str.
FRIK966]
gi|291284538|ref|YP_003501356.1| cold-shock protein [Escherichia coli O55:H7 str. CB9615]
gi|331684811|ref|ZP_08385403.1| ATP-dependent RNA helicase DeaD [Escherichia coli H299]
gi|387884348|ref|YP_006314650.1| ATP-dependent RNA helicase DeaD [Escherichia coli Xuzhou21]
gi|416308473|ref|ZP_11655149.1| Cold-shock DEAD-box protein A [Escherichia coli O157:H7 str. 1044]
gi|416322336|ref|ZP_11664184.1| Cold-shock DEAD-box protein A [Escherichia coli O157:H7 str.
EC1212]
gi|416332573|ref|ZP_11670484.1| Cold-shock DEAD-box protein A [Escherichia coli O157:H7 str. 1125]
gi|416777662|ref|ZP_11875313.1| ATP-dependent RNA helicase DeaD [Escherichia coli O157:H7 str.
G5101]
gi|416789056|ref|ZP_11880238.1| ATP-dependent RNA helicase DeaD [Escherichia coli O157:H- str.
493-89]
gi|416800965|ref|ZP_11885143.1| ATP-dependent RNA helicase DeaD [Escherichia coli O157:H- str. H
2687]
gi|416811597|ref|ZP_11889954.1| ATP-dependent RNA helicase DeaD [Escherichia coli O55:H7 str.
3256-97]
gi|416822105|ref|ZP_11894612.1| ATP-dependent RNA helicase DeaD [Escherichia coli O55:H7 str. USDA
5905]
gi|416832497|ref|ZP_11899708.1| ATP-dependent RNA helicase DeaD [Escherichia coli O157:H7 str.
LSU-61]
gi|417630618|ref|ZP_12280853.1| cold-shock DEAD box protein A [Escherichia coli STEC_MHI813]
gi|419047016|ref|ZP_13593950.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC3A]
gi|419052940|ref|ZP_13599807.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC3B]
gi|419058937|ref|ZP_13605739.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC3C]
gi|419064435|ref|ZP_13611157.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC3D]
gi|419071384|ref|ZP_13616997.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC3E]
gi|419077101|ref|ZP_13622604.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC3F]
gi|419082413|ref|ZP_13627859.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC4A]
gi|419088241|ref|ZP_13633593.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC4B]
gi|419094241|ref|ZP_13639521.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC4C]
gi|419100029|ref|ZP_13645221.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC4D]
gi|419105787|ref|ZP_13650912.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC4E]
gi|419111212|ref|ZP_13656264.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC4F]
gi|419116710|ref|ZP_13661722.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC5A]
gi|419122426|ref|ZP_13667369.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC5B]
gi|419138430|ref|ZP_13683221.1| cold-shock DEAD box protein A [Escherichia coli DEC5E]
gi|420271413|ref|ZP_14773766.1| cold-shock DEAD-box protein A [Escherichia coli PA22]
gi|420277208|ref|ZP_14779489.1| cold-shock DEAD-box protein A [Escherichia coli PA40]
gi|420281896|ref|ZP_14784129.1| cold-shock DEAD-box protein A [Escherichia coli TW06591]
gi|420288125|ref|ZP_14790309.1| cold-shock DEAD-box protein A [Escherichia coli TW10246]
gi|420300135|ref|ZP_14802180.1| cold-shock DEAD-box protein A [Escherichia coli TW09109]
gi|420305943|ref|ZP_14807932.1| cold-shock DEAD-box protein A [Escherichia coli TW10119]
gi|420311396|ref|ZP_14813325.1| cold-shock DEAD-box protein A [Escherichia coli EC1738]
gi|420316666|ref|ZP_14818539.1| cold-shock DEAD-box protein A [Escherichia coli EC1734]
gi|421814200|ref|ZP_16249907.1| cold-shock DEAD-box protein A [Escherichia coli 8.0416]
gi|421819996|ref|ZP_16255483.1| cold-shock DEAD box protein A [Escherichia coli 10.0821]
gi|421826008|ref|ZP_16261362.1| cold-shock DEAD-box protein A [Escherichia coli FRIK920]
gi|421832724|ref|ZP_16268006.1| cold-shock DEAD-box protein A [Escherichia coli PA7]
gi|422833486|ref|ZP_16881552.1| cold-shock DEAD box protein A [Escherichia coli E101]
gi|423727121|ref|ZP_17701035.1| cold-shock DEAD-box protein A [Escherichia coli PA31]
gi|424079326|ref|ZP_17816294.1| cold-shock DEAD-box protein A [Escherichia coli FDA505]
gi|424085782|ref|ZP_17822269.1| cold-shock DEAD-box protein A [Escherichia coli FDA517]
gi|424092184|ref|ZP_17828114.1| cold-shock DEAD-box protein A [Escherichia coli FRIK1996]
gi|424098854|ref|ZP_17834130.1| cold-shock DEAD-box protein A [Escherichia coli FRIK1985]
gi|424105068|ref|ZP_17839811.1| cold-shock DEAD-box protein A [Escherichia coli FRIK1990]
gi|424111714|ref|ZP_17845944.1| cold-shock DEAD-box protein A [Escherichia coli 93-001]
gi|424117651|ref|ZP_17851485.1| cold-shock DEAD-box protein A [Escherichia coli PA3]
gi|424123840|ref|ZP_17857147.1| cold-shock DEAD-box protein A [Escherichia coli PA5]
gi|424129991|ref|ZP_17862894.1| cold-shock DEAD-box protein A [Escherichia coli PA9]
gi|424136315|ref|ZP_17868763.1| cold-shock DEAD-box protein A [Escherichia coli PA10]
gi|424142867|ref|ZP_17874734.1| cold-shock DEAD-box protein A [Escherichia coli PA14]
gi|424149268|ref|ZP_17880639.1| cold-shock DEAD-box protein A [Escherichia coli PA15]
gi|424155118|ref|ZP_17886050.1| cold-shock DEAD-box protein A [Escherichia coli PA24]
gi|424253717|ref|ZP_17891597.1| cold-shock DEAD-box protein A [Escherichia coli PA25]
gi|424332504|ref|ZP_17897501.1| cold-shock DEAD-box protein A [Escherichia coli PA28]
gi|424451553|ref|ZP_17903223.1| cold-shock DEAD-box protein A [Escherichia coli PA32]
gi|424457743|ref|ZP_17908853.1| cold-shock DEAD-box protein A [Escherichia coli PA33]
gi|424464200|ref|ZP_17914577.1| cold-shock DEAD-box protein A [Escherichia coli PA39]
gi|424470505|ref|ZP_17920317.1| cold-shock DEAD-box protein A [Escherichia coli PA41]
gi|424477013|ref|ZP_17926326.1| cold-shock DEAD-box protein A [Escherichia coli PA42]
gi|424482769|ref|ZP_17931745.1| cold-shock DEAD-box protein A [Escherichia coli TW07945]
gi|424495604|ref|ZP_17943227.1| cold-shock DEAD-box protein A [Escherichia coli TW09195]
gi|424502304|ref|ZP_17949191.1| cold-shock DEAD-box protein A [Escherichia coli EC4203]
gi|424508557|ref|ZP_17954941.1| cold-shock DEAD-box protein A [Escherichia coli EC4196]
gi|424515907|ref|ZP_17960542.1| cold-shock DEAD-box protein A [Escherichia coli TW14313]
gi|424527986|ref|ZP_17971698.1| cold-shock DEAD-box protein A [Escherichia coli EC4421]
gi|424534132|ref|ZP_17977476.1| cold-shock DEAD-box protein A [Escherichia coli EC4422]
gi|424540185|ref|ZP_17983125.1| cold-shock DEAD-box protein A [Escherichia coli EC4013]
gi|424546313|ref|ZP_17988682.1| cold-shock DEAD-box protein A [Escherichia coli EC4402]
gi|424552536|ref|ZP_17994377.1| cold-shock DEAD-box protein A [Escherichia coli EC4439]
gi|424558726|ref|ZP_18000132.1| cold-shock DEAD-box protein A [Escherichia coli EC4436]
gi|424565063|ref|ZP_18006062.1| cold-shock DEAD-box protein A [Escherichia coli EC4437]
gi|424571191|ref|ZP_18011736.1| cold-shock DEAD-box protein A [Escherichia coli EC4448]
gi|424577347|ref|ZP_18017397.1| cold-shock DEAD-box protein A [Escherichia coli EC1845]
gi|424583167|ref|ZP_18022810.1| cold-shock DEAD-box protein A [Escherichia coli EC1863]
gi|425099840|ref|ZP_18502569.1| cold-shock DEAD box protein A [Escherichia coli 3.4870]
gi|425105937|ref|ZP_18508251.1| cold-shock DEAD box protein A [Escherichia coli 5.2239]
gi|425111950|ref|ZP_18513867.1| cold-shock DEAD-box protein A [Escherichia coli 6.0172]
gi|425127873|ref|ZP_18529037.1| cold-shock DEAD box protein A [Escherichia coli 8.0586]
gi|425133616|ref|ZP_18534462.1| cold-shock DEAD box protein A [Escherichia coli 8.2524]
gi|425140192|ref|ZP_18540570.1| cold-shock DEAD-box protein A [Escherichia coli 10.0833]
gi|425145905|ref|ZP_18545896.1| cold-shock DEAD box protein A [Escherichia coli 10.0869]
gi|425152020|ref|ZP_18551631.1| cold-shock DEAD box protein A [Escherichia coli 88.0221]
gi|425157892|ref|ZP_18557152.1| cold-shock DEAD-box protein A [Escherichia coli PA34]
gi|425164245|ref|ZP_18563128.1| cold-shock DEAD-box protein A [Escherichia coli FDA506]
gi|425169988|ref|ZP_18568457.1| cold-shock DEAD-box protein A [Escherichia coli FDA507]
gi|425176047|ref|ZP_18574163.1| cold-shock DEAD-box protein A [Escherichia coli FDA504]
gi|425182089|ref|ZP_18579780.1| cold-shock DEAD-box protein A [Escherichia coli FRIK1999]
gi|425188356|ref|ZP_18585625.1| cold-shock DEAD-box protein A [Escherichia coli FRIK1997]
gi|425195122|ref|ZP_18591888.1| cold-shock DEAD-box protein A [Escherichia coli NE1487]
gi|425201597|ref|ZP_18597801.1| cold-shock DEAD-box protein A [Escherichia coli NE037]
gi|425207982|ref|ZP_18603775.1| cold-shock DEAD-box protein A [Escherichia coli FRIK2001]
gi|425213737|ref|ZP_18609133.1| cold-shock DEAD-box protein A [Escherichia coli PA4]
gi|425219859|ref|ZP_18614818.1| cold-shock DEAD-box protein A [Escherichia coli PA23]
gi|425226409|ref|ZP_18620872.1| cold-shock DEAD-box protein A [Escherichia coli PA49]
gi|425232666|ref|ZP_18626702.1| cold-shock DEAD-box protein A [Escherichia coli PA45]
gi|425238590|ref|ZP_18632306.1| cold-shock DEAD-box protein A [Escherichia coli TT12B]
gi|425244826|ref|ZP_18638128.1| cold-shock DEAD-box protein A [Escherichia coli MA6]
gi|425251017|ref|ZP_18643956.1| cold-shock DEAD-box protein A [Escherichia coli 5905]
gi|425256804|ref|ZP_18649312.1| cold-shock DEAD-box protein A [Escherichia coli CB7326]
gi|425263055|ref|ZP_18655054.1| cold-shock DEAD-box protein A [Escherichia coli EC96038]
gi|425269052|ref|ZP_18660679.1| cold-shock DEAD-box protein A [Escherichia coli 5412]
gi|425296507|ref|ZP_18686671.1| cold-shock DEAD-box protein A [Escherichia coli PA38]
gi|425313195|ref|ZP_18702370.1| cold-shock DEAD-box protein A [Escherichia coli EC1735]
gi|425319179|ref|ZP_18707963.1| cold-shock DEAD-box protein A [Escherichia coli EC1736]
gi|425325271|ref|ZP_18713624.1| cold-shock DEAD-box protein A [Escherichia coli EC1737]
gi|425331638|ref|ZP_18719472.1| cold-shock DEAD-box protein A [Escherichia coli EC1846]
gi|425337819|ref|ZP_18725172.1| cold-shock DEAD-box protein A [Escherichia coli EC1847]
gi|425344127|ref|ZP_18731014.1| cold-shock DEAD-box protein A [Escherichia coli EC1848]
gi|425349935|ref|ZP_18736399.1| cold-shock DEAD-box protein A [Escherichia coli EC1849]
gi|425356236|ref|ZP_18742300.1| cold-shock DEAD-box protein A [Escherichia coli EC1850]
gi|425362198|ref|ZP_18747842.1| cold-shock DEAD-box protein A [Escherichia coli EC1856]
gi|425368416|ref|ZP_18753536.1| cold-shock DEAD-box protein A [Escherichia coli EC1862]
gi|425374733|ref|ZP_18759371.1| cold-shock DEAD-box protein A [Escherichia coli EC1864]
gi|425387621|ref|ZP_18771176.1| cold-shock DEAD-box protein A [Escherichia coli EC1866]
gi|425394272|ref|ZP_18777377.1| cold-shock DEAD-box protein A [Escherichia coli EC1868]
gi|425400414|ref|ZP_18783115.1| cold-shock DEAD-box protein A [Escherichia coli EC1869]
gi|425406501|ref|ZP_18788719.1| cold-shock DEAD-box protein A [Escherichia coli EC1870]
gi|425412887|ref|ZP_18794646.1| cold-shock DEAD-box protein A [Escherichia coli NE098]
gi|425419201|ref|ZP_18800466.1| cold-shock DEAD-box protein A [Escherichia coli FRIK523]
gi|425430474|ref|ZP_18811079.1| cold-shock DEAD-box protein A [Escherichia coli 0.1304]
gi|428948907|ref|ZP_19021179.1| cold-shock DEAD box protein A [Escherichia coli 88.1467]
gi|428954981|ref|ZP_19026773.1| cold-shock DEAD box protein A [Escherichia coli 88.1042]
gi|428960969|ref|ZP_19032260.1| cold-shock DEAD box protein A [Escherichia coli 89.0511]
gi|428967586|ref|ZP_19038294.1| cold-shock DEAD box protein A [Escherichia coli 90.0091]
gi|428973398|ref|ZP_19043720.1| cold-shock DEAD box protein A [Escherichia coli 90.0039]
gi|428979864|ref|ZP_19049680.1| cold-shock DEAD box protein A [Escherichia coli 90.2281]
gi|428985557|ref|ZP_19054946.1| cold-shock DEAD box protein A [Escherichia coli 93.0055]
gi|428991701|ref|ZP_19060685.1| cold-shock DEAD box protein A [Escherichia coli 93.0056]
gi|428997589|ref|ZP_19066179.1| cold-shock DEAD box protein A [Escherichia coli 94.0618]
gi|429003857|ref|ZP_19071954.1| cold-shock DEAD box protein A [Escherichia coli 95.0183]
gi|429009956|ref|ZP_19077410.1| cold-shock DEAD box protein A [Escherichia coli 95.1288]
gi|429016478|ref|ZP_19083356.1| cold-shock DEAD box protein A [Escherichia coli 95.0943]
gi|429022287|ref|ZP_19088803.1| cold-shock DEAD box protein A [Escherichia coli 96.0428]
gi|429028377|ref|ZP_19094366.1| cold-shock DEAD box protein A [Escherichia coli 96.0427]
gi|429034552|ref|ZP_19100070.1| cold-shock DEAD box protein A [Escherichia coli 96.0939]
gi|429046584|ref|ZP_19111292.1| cold-shock DEAD box protein A [Escherichia coli 96.0107]
gi|429051908|ref|ZP_19116470.1| cold-shock DEAD box protein A [Escherichia coli 97.0003]
gi|429057358|ref|ZP_19121644.1| cold-shock DEAD box protein A [Escherichia coli 97.1742]
gi|429062859|ref|ZP_19126847.1| cold-shock DEAD box protein A [Escherichia coli 97.0007]
gi|429069093|ref|ZP_19132545.1| cold-shock DEAD box protein A [Escherichia coli 99.0672]
gi|429075033|ref|ZP_19138281.1| cold-shock DEAD-box protein A [Escherichia coli 99.0678]
gi|429080233|ref|ZP_19143365.1| cold-shock DEAD box protein A [Escherichia coli 99.0713]
gi|429828275|ref|ZP_19359294.1| cold-shock DEAD box protein A [Escherichia coli 96.0109]
gi|429834710|ref|ZP_19365011.1| cold-shock DEAD box protein A [Escherichia coli 97.0010]
gi|432451409|ref|ZP_19693666.1| cold-shock DEAD box protein A [Escherichia coli KTE193]
gi|432618413|ref|ZP_19854518.1| cold-shock DEAD box protein A [Escherichia coli KTE75]
gi|432720299|ref|ZP_19955264.1| cold-shock DEAD box protein A [Escherichia coli KTE9]
gi|432854308|ref|ZP_20082853.1| cold-shock DEAD box protein A [Escherichia coli KTE144]
gi|432865076|ref|ZP_20088324.1| cold-shock DEAD box protein A [Escherichia coli KTE146]
gi|432949230|ref|ZP_20144153.1| cold-shock DEAD box protein A [Escherichia coli KTE196]
gi|433035056|ref|ZP_20222755.1| cold-shock DEAD box protein A [Escherichia coli KTE112]
gi|433044708|ref|ZP_20232195.1| cold-shock DEAD box protein A [Escherichia coli KTE117]
gi|444926790|ref|ZP_21246065.1| cold-shock DEAD box protein A [Escherichia coli 09BKT078844]
gi|444932476|ref|ZP_21251497.1| cold-shock DEAD box protein A [Escherichia coli 99.0814]
gi|444937902|ref|ZP_21256659.1| cold-shock DEAD box protein A [Escherichia coli 99.0815]
gi|444943495|ref|ZP_21261996.1| cold-shock DEAD box protein A [Escherichia coli 99.0816]
gi|444949031|ref|ZP_21267334.1| cold-shock DEAD box protein A [Escherichia coli 99.0839]
gi|444954601|ref|ZP_21272679.1| cold-shock DEAD box protein A [Escherichia coli 99.0848]
gi|444960072|ref|ZP_21277907.1| cold-shock DEAD box protein A [Escherichia coli 99.1753]
gi|444965316|ref|ZP_21282895.1| cold-shock DEAD box protein A [Escherichia coli 99.1775]
gi|444971256|ref|ZP_21288605.1| cold-shock DEAD box protein A [Escherichia coli 99.1793]
gi|444976502|ref|ZP_21293605.1| cold-shock DEAD box protein A [Escherichia coli 99.1805]
gi|444981942|ref|ZP_21298845.1| cold-shock DEAD box protein A [Escherichia coli ATCC 700728]
gi|444987301|ref|ZP_21304075.1| cold-shock DEAD box protein A [Escherichia coli PA11]
gi|444992609|ref|ZP_21309249.1| cold-shock DEAD box protein A [Escherichia coli PA19]
gi|444997895|ref|ZP_21314390.1| cold-shock DEAD box protein A [Escherichia coli PA13]
gi|445003491|ref|ZP_21319876.1| cold-shock DEAD box protein A [Escherichia coli PA2]
gi|445008863|ref|ZP_21325100.1| cold-shock DEAD box protein A [Escherichia coli PA47]
gi|445014027|ref|ZP_21330129.1| cold-shock DEAD box protein A [Escherichia coli PA48]
gi|445019904|ref|ZP_21335866.1| cold-shock DEAD box protein A [Escherichia coli PA8]
gi|445030736|ref|ZP_21346401.1| cold-shock DEAD box protein A [Escherichia coli 99.1781]
gi|445036167|ref|ZP_21351691.1| cold-shock DEAD box protein A [Escherichia coli 99.1762]
gi|445041788|ref|ZP_21357156.1| cold-shock DEAD box protein A [Escherichia coli PA35]
gi|445047051|ref|ZP_21362296.1| cold-shock DEAD box protein A [Escherichia coli 3.4880]
gi|445052569|ref|ZP_21367593.1| cold-shock DEAD box protein A [Escherichia coli 95.0083]
gi|445058266|ref|ZP_21373122.1| cold-shock DEAD box protein A [Escherichia coli 99.0670]
gi|450193267|ref|ZP_21891924.1| ATP-dependent RNA helicase DeaD [Escherichia coli SEPT362]
gi|452968171|ref|ZP_21966398.1| ATP-dependent RNA helicase DeaD [Escherichia coli O157:H7 str.
EC4009]
gi|32171494|sp|Q8XA87.3|DEAD_ECO57 RecName: Full=Cold-shock DEAD box protein A; AltName:
Full=ATP-dependent RNA helicase DeaD
gi|187770756|gb|EDU34600.1| cold-shock DEAD box protein A [Escherichia coli O157:H7 str.
EC4196]
gi|188016396|gb|EDU54518.1| cold-shock DEAD box protein A [Escherichia coli O157:H7 str.
EC4113]
gi|189001016|gb|EDU70002.1| cold-shock DEAD box protein A [Escherichia coli O157:H7 str.
EC4076]
gi|189358785|gb|EDU77204.1| cold-shock DEAD box protein A [Escherichia coli O157:H7 str.
EC4401]
gi|189361392|gb|EDU79811.1| cold-shock DEAD box protein A [Escherichia coli O157:H7 str.
EC4486]
gi|189367581|gb|EDU85997.1| cold-shock DEAD box protein A [Escherichia coli O157:H7 str.
EC4501]
gi|189374042|gb|EDU92458.1| cold-shock DEAD box protein A [Escherichia coli O157:H7 str. EC869]
gi|189379846|gb|EDU98262.1| cold-shock DEAD box protein A [Escherichia coli O157:H7 str. EC508]
gi|208725932|gb|EDZ75533.1| cold-shock DEAD box protein A [Escherichia coli O157:H7 str.
EC4206]
gi|208733296|gb|EDZ81983.1| cold-shock DEAD box protein A [Escherichia coli O157:H7 str.
EC4045]
gi|208738407|gb|EDZ86089.1| cold-shock DEAD box protein A [Escherichia coli O157:H7 str.
EC4042]
gi|209161697|gb|ACI39130.1| cold-shock DEAD box protein A [Escherichia coli O157:H7 str.
EC4115]
gi|217320315|gb|EEC28740.1| cold-shock DEAD box protein A [Escherichia coli O157:H7 str.
TW14588]
gi|254594513|gb|ACT73874.1| ATP-dependent RNA helicase [Escherichia coli O157:H7 str. TW14359]
gi|290764411|gb|ADD58372.1| Cold-shock DEAD-box protein A [Escherichia coli O55:H7 str. CB9615]
gi|320189516|gb|EFW64175.1| Cold-shock DEAD-box protein A [Escherichia coli O157:H7 str.
EC1212]
gi|320640234|gb|EFX09806.1| ATP-dependent RNA helicase DeaD [Escherichia coli O157:H7 str.
G5101]
gi|320645531|gb|EFX14540.1| ATP-dependent RNA helicase DeaD [Escherichia coli O157:H- str.
493-89]
gi|320650841|gb|EFX19298.1| ATP-dependent RNA helicase DeaD [Escherichia coli O157:H- str. H
2687]
gi|320656222|gb|EFX24134.1| ATP-dependent RNA helicase DeaD [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320661912|gb|EFX29320.1| ATP-dependent RNA helicase DeaD [Escherichia coli O55:H7 str. USDA
5905]
gi|320666747|gb|EFX33726.1| ATP-dependent RNA helicase DeaD [Escherichia coli O157:H7 str.
LSU-61]
gi|326337864|gb|EGD61698.1| Cold-shock DEAD-box protein A [Escherichia coli O157:H7 str. 1125]
gi|326347433|gb|EGD71158.1| Cold-shock DEAD-box protein A [Escherichia coli O157:H7 str. 1044]
gi|331078426|gb|EGI49632.1| ATP-dependent RNA helicase DeaD [Escherichia coli H299]
gi|345371019|gb|EGX02993.1| cold-shock DEAD box protein A [Escherichia coli STEC_MHI813]
gi|371606348|gb|EHN94945.1| cold-shock DEAD box protein A [Escherichia coli E101]
gi|377890946|gb|EHU55399.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC3A]
gi|377891787|gb|EHU56239.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC3B]
gi|377903604|gb|EHU67895.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC3C]
gi|377907788|gb|EHU72011.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC3D]
gi|377909658|gb|EHU73858.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC3E]
gi|377919179|gb|EHU83222.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC3F]
gi|377924472|gb|EHU88419.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC4A]
gi|377928733|gb|EHU92643.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC4B]
gi|377939096|gb|EHV02853.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC4D]
gi|377940017|gb|EHV03769.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC4C]
gi|377945916|gb|EHV09606.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC4E]
gi|377955118|gb|EHV18675.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC4F]
gi|377958519|gb|EHV22032.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC5A]
gi|377963389|gb|EHV26836.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC5B]
gi|377982850|gb|EHV46102.1| cold-shock DEAD box protein A [Escherichia coli DEC5E]
gi|386797806|gb|AFJ30840.1| ATP-dependent RNA helicase DeaD [Escherichia coli Xuzhou21]
gi|390639032|gb|EIN18520.1| cold-shock DEAD-box protein A [Escherichia coli FRIK1996]
gi|390640538|gb|EIN19990.1| cold-shock DEAD-box protein A [Escherichia coli FDA517]
gi|390640747|gb|EIN20192.1| cold-shock DEAD-box protein A [Escherichia coli FDA505]
gi|390658277|gb|EIN36074.1| cold-shock DEAD-box protein A [Escherichia coli FRIK1985]
gi|390658369|gb|EIN36164.1| cold-shock DEAD-box protein A [Escherichia coli 93-001]
gi|390661357|gb|EIN39015.1| cold-shock DEAD-box protein A [Escherichia coli FRIK1990]
gi|390675337|gb|EIN51488.1| cold-shock DEAD-box protein A [Escherichia coli PA3]
gi|390678660|gb|EIN54606.1| cold-shock DEAD-box protein A [Escherichia coli PA5]
gi|390682274|gb|EIN58044.1| cold-shock DEAD-box protein A [Escherichia coli PA9]
gi|390693914|gb|EIN68527.1| cold-shock DEAD-box protein A [Escherichia coli PA10]
gi|390698281|gb|EIN72666.1| cold-shock DEAD-box protein A [Escherichia coli PA14]
gi|390698915|gb|EIN73283.1| cold-shock DEAD-box protein A [Escherichia coli PA15]
gi|390712834|gb|EIN85778.1| cold-shock DEAD-box protein A [Escherichia coli PA22]
gi|390719714|gb|EIN92432.1| cold-shock DEAD-box protein A [Escherichia coli PA25]
gi|390721360|gb|EIN94055.1| cold-shock DEAD-box protein A [Escherichia coli PA24]
gi|390725460|gb|EIN97962.1| cold-shock DEAD-box protein A [Escherichia coli PA28]
gi|390738999|gb|EIO10192.1| cold-shock DEAD-box protein A [Escherichia coli PA31]
gi|390739724|gb|EIO10885.1| cold-shock DEAD-box protein A [Escherichia coli PA32]
gi|390743143|gb|EIO14128.1| cold-shock DEAD-box protein A [Escherichia coli PA33]
gi|390756805|gb|EIO26306.1| cold-shock DEAD-box protein A [Escherichia coli PA40]
gi|390763792|gb|EIO33019.1| cold-shock DEAD-box protein A [Escherichia coli PA39]
gi|390764918|gb|EIO34108.1| cold-shock DEAD-box protein A [Escherichia coli PA41]
gi|390766442|gb|EIO35561.1| cold-shock DEAD-box protein A [Escherichia coli PA42]
gi|390780057|gb|EIO47757.1| cold-shock DEAD-box protein A [Escherichia coli TW06591]
gi|390787463|gb|EIO54948.1| cold-shock DEAD-box protein A [Escherichia coli TW07945]
gi|390788687|gb|EIO56152.1| cold-shock DEAD-box protein A [Escherichia coli TW10246]
gi|390805756|gb|EIO72692.1| cold-shock DEAD-box protein A [Escherichia coli TW09109]
gi|390814458|gb|EIO81022.1| cold-shock DEAD-box protein A [Escherichia coli TW10119]
gi|390823872|gb|EIO89887.1| cold-shock DEAD-box protein A [Escherichia coli EC4203]
gi|390825891|gb|EIO91777.1| cold-shock DEAD-box protein A [Escherichia coli TW09195]
gi|390828721|gb|EIO94358.1| cold-shock DEAD-box protein A [Escherichia coli EC4196]
gi|390843306|gb|EIP07112.1| cold-shock DEAD-box protein A [Escherichia coli TW14313]
gi|390848841|gb|EIP12294.1| cold-shock DEAD-box protein A [Escherichia coli EC4421]
gi|390859161|gb|EIP21515.1| cold-shock DEAD-box protein A [Escherichia coli EC4422]
gi|390863721|gb|EIP25852.1| cold-shock DEAD-box protein A [Escherichia coli EC4013]
gi|390868379|gb|EIP30130.1| cold-shock DEAD-box protein A [Escherichia coli EC4402]
gi|390876460|gb|EIP37445.1| cold-shock DEAD-box protein A [Escherichia coli EC4439]
gi|390882010|gb|EIP42562.1| cold-shock DEAD-box protein A [Escherichia coli EC4436]
gi|390891747|gb|EIP51369.1| cold-shock DEAD-box protein A [Escherichia coli EC4437]
gi|390893620|gb|EIP53160.1| cold-shock DEAD-box protein A [Escherichia coli EC4448]
gi|390898753|gb|EIP58014.1| cold-shock DEAD-box protein A [Escherichia coli EC1738]
gi|390906923|gb|EIP65792.1| cold-shock DEAD-box protein A [Escherichia coli EC1734]
gi|390917177|gb|EIP75610.1| cold-shock DEAD-box protein A [Escherichia coli EC1863]
gi|390918181|gb|EIP76592.1| cold-shock DEAD-box protein A [Escherichia coli EC1845]
gi|408063095|gb|EKG97594.1| cold-shock DEAD-box protein A [Escherichia coli PA7]
gi|408065310|gb|EKG99785.1| cold-shock DEAD-box protein A [Escherichia coli FRIK920]
gi|408067674|gb|EKH02104.1| cold-shock DEAD-box protein A [Escherichia coli PA34]
gi|408077569|gb|EKH11768.1| cold-shock DEAD-box protein A [Escherichia coli FDA506]
gi|408081029|gb|EKH15063.1| cold-shock DEAD-box protein A [Escherichia coli FDA507]
gi|408089597|gb|EKH22901.1| cold-shock DEAD-box protein A [Escherichia coli FDA504]
gi|408095804|gb|EKH28768.1| cold-shock DEAD-box protein A [Escherichia coli FRIK1999]
gi|408102298|gb|EKH34713.1| cold-shock DEAD-box protein A [Escherichia coli FRIK1997]
gi|408106710|gb|EKH38803.1| cold-shock DEAD-box protein A [Escherichia coli NE1487]
gi|408113443|gb|EKH45033.1| cold-shock DEAD-box protein A [Escherichia coli NE037]
gi|408119569|gb|EKH50629.1| cold-shock DEAD-box protein A [Escherichia coli FRIK2001]
gi|408125825|gb|EKH56415.1| cold-shock DEAD-box protein A [Escherichia coli PA4]
gi|408135748|gb|EKH65518.1| cold-shock DEAD-box protein A [Escherichia coli PA23]
gi|408138376|gb|EKH68045.1| cold-shock DEAD-box protein A [Escherichia coli PA49]
gi|408144797|gb|EKH74011.1| cold-shock DEAD-box protein A [Escherichia coli PA45]
gi|408153098|gb|EKH81502.1| cold-shock DEAD-box protein A [Escherichia coli TT12B]
gi|408158202|gb|EKH86326.1| cold-shock DEAD-box protein A [Escherichia coli MA6]
gi|408162183|gb|EKH90098.1| cold-shock DEAD-box protein A [Escherichia coli 5905]
gi|408171458|gb|EKH98573.1| cold-shock DEAD-box protein A [Escherichia coli CB7326]
gi|408178221|gb|EKI04942.1| cold-shock DEAD-box protein A [Escherichia coli EC96038]
gi|408181504|gb|EKI08059.1| cold-shock DEAD-box protein A [Escherichia coli 5412]
gi|408214946|gb|EKI39352.1| cold-shock DEAD-box protein A [Escherichia coli PA38]
gi|408225163|gb|EKI48852.1| cold-shock DEAD-box protein A [Escherichia coli EC1735]
gi|408236310|gb|EKI59214.1| cold-shock DEAD-box protein A [Escherichia coli EC1736]
gi|408240056|gb|EKI62769.1| cold-shock DEAD-box protein A [Escherichia coli EC1737]
gi|408244570|gb|EKI66990.1| cold-shock DEAD-box protein A [Escherichia coli EC1846]
gi|408253325|gb|EKI74923.1| cold-shock DEAD-box protein A [Escherichia coli EC1847]
gi|408257233|gb|EKI78556.1| cold-shock DEAD-box protein A [Escherichia coli EC1848]
gi|408263793|gb|EKI84621.1| cold-shock DEAD-box protein A [Escherichia coli EC1849]
gi|408272365|gb|EKI92455.1| cold-shock DEAD-box protein A [Escherichia coli EC1850]
gi|408275378|gb|EKI95340.1| cold-shock DEAD-box protein A [Escherichia coli EC1856]
gi|408283649|gb|EKJ02797.1| cold-shock DEAD-box protein A [Escherichia coli EC1862]
gi|408289639|gb|EKJ08395.1| cold-shock DEAD-box protein A [Escherichia coli EC1864]
gi|408305458|gb|EKJ22851.1| cold-shock DEAD-box protein A [Escherichia coli EC1868]
gi|408306055|gb|EKJ23432.1| cold-shock DEAD-box protein A [Escherichia coli EC1866]
gi|408316934|gb|EKJ33184.1| cold-shock DEAD-box protein A [Escherichia coli EC1869]
gi|408322534|gb|EKJ38513.1| cold-shock DEAD-box protein A [Escherichia coli EC1870]
gi|408324867|gb|EKJ40788.1| cold-shock DEAD-box protein A [Escherichia coli NE098]
gi|408334915|gb|EKJ49780.1| cold-shock DEAD-box protein A [Escherichia coli FRIK523]
gi|408344339|gb|EKJ58709.1| cold-shock DEAD-box protein A [Escherichia coli 0.1304]
gi|408547102|gb|EKK24501.1| cold-shock DEAD box protein A [Escherichia coli 5.2239]
gi|408547202|gb|EKK24600.1| cold-shock DEAD box protein A [Escherichia coli 3.4870]
gi|408548618|gb|EKK26000.1| cold-shock DEAD-box protein A [Escherichia coli 6.0172]
gi|408565583|gb|EKK41666.1| cold-shock DEAD box protein A [Escherichia coli 8.0586]
gi|408577364|gb|EKK52939.1| cold-shock DEAD-box protein A [Escherichia coli 10.0833]
gi|408579632|gb|EKK55084.1| cold-shock DEAD box protein A [Escherichia coli 8.2524]
gi|408589511|gb|EKK64021.1| cold-shock DEAD box protein A [Escherichia coli 10.0869]
gi|408595035|gb|EKK69303.1| cold-shock DEAD box protein A [Escherichia coli 88.0221]
gi|408599733|gb|EKK73622.1| cold-shock DEAD-box protein A [Escherichia coli 8.0416]
gi|408610440|gb|EKK83811.1| cold-shock DEAD box protein A [Escherichia coli 10.0821]
gi|427202528|gb|EKV72852.1| cold-shock DEAD box protein A [Escherichia coli 88.1042]
gi|427203880|gb|EKV74176.1| cold-shock DEAD box protein A [Escherichia coli 89.0511]
gi|427206438|gb|EKV76650.1| cold-shock DEAD box protein A [Escherichia coli 88.1467]
gi|427218842|gb|EKV87822.1| cold-shock DEAD box protein A [Escherichia coli 90.0091]
gi|427222466|gb|EKV91249.1| cold-shock DEAD box protein A [Escherichia coli 90.2281]
gi|427225693|gb|EKV94318.1| cold-shock DEAD box protein A [Escherichia coli 90.0039]
gi|427239644|gb|EKW07122.1| cold-shock DEAD box protein A [Escherichia coli 93.0056]
gi|427240012|gb|EKW07479.1| cold-shock DEAD box protein A [Escherichia coli 93.0055]
gi|427243901|gb|EKW11249.1| cold-shock DEAD box protein A [Escherichia coli 94.0618]
gi|427258366|gb|EKW24456.1| cold-shock DEAD box protein A [Escherichia coli 95.0183]
gi|427259259|gb|EKW25318.1| cold-shock DEAD box protein A [Escherichia coli 95.0943]
gi|427261881|gb|EKW27797.1| cold-shock DEAD box protein A [Escherichia coli 95.1288]
gi|427274523|gb|EKW39171.1| cold-shock DEAD box protein A [Escherichia coli 96.0428]
gi|427277183|gb|EKW41725.1| cold-shock DEAD box protein A [Escherichia coli 96.0427]
gi|427281512|gb|EKW45822.1| cold-shock DEAD box protein A [Escherichia coli 96.0939]
gi|427297023|gb|EKW60067.1| cold-shock DEAD box protein A [Escherichia coli 96.0107]
gi|427298777|gb|EKW61771.1| cold-shock DEAD box protein A [Escherichia coli 97.0003]
gi|427309748|gb|EKW72043.1| cold-shock DEAD box protein A [Escherichia coli 97.1742]
gi|427312941|gb|EKW75077.1| cold-shock DEAD box protein A [Escherichia coli 97.0007]
gi|427317267|gb|EKW79173.1| cold-shock DEAD box protein A [Escherichia coli 99.0672]
gi|427326119|gb|EKW87545.1| cold-shock DEAD-box protein A [Escherichia coli 99.0678]
gi|427327493|gb|EKW88880.1| cold-shock DEAD box protein A [Escherichia coli 99.0713]
gi|429251916|gb|EKY36478.1| cold-shock DEAD box protein A [Escherichia coli 96.0109]
gi|429253372|gb|EKY37860.1| cold-shock DEAD box protein A [Escherichia coli 97.0010]
gi|430977838|gb|ELC94661.1| cold-shock DEAD box protein A [Escherichia coli KTE193]
gi|431152169|gb|ELE53127.1| cold-shock DEAD box protein A [Escherichia coli KTE75]
gi|431261122|gb|ELF53213.1| cold-shock DEAD box protein A [Escherichia coli KTE9]
gi|431398723|gb|ELG82143.1| cold-shock DEAD box protein A [Escherichia coli KTE144]
gi|431402833|gb|ELG86138.1| cold-shock DEAD box protein A [Escherichia coli KTE146]
gi|431455862|gb|ELH36217.1| cold-shock DEAD box protein A [Escherichia coli KTE196]
gi|431547796|gb|ELI22091.1| cold-shock DEAD box protein A [Escherichia coli KTE112]
gi|431554453|gb|ELI28334.1| cold-shock DEAD box protein A [Escherichia coli KTE117]
gi|444536123|gb|ELV16155.1| cold-shock DEAD box protein A [Escherichia coli 99.0814]
gi|444537875|gb|ELV17783.1| cold-shock DEAD box protein A [Escherichia coli 09BKT078844]
gi|444546301|gb|ELV25054.1| cold-shock DEAD box protein A [Escherichia coli 99.0815]
gi|444555797|gb|ELV33241.1| cold-shock DEAD box protein A [Escherichia coli 99.0839]
gi|444556081|gb|ELV33512.1| cold-shock DEAD box protein A [Escherichia coli 99.0816]
gi|444561129|gb|ELV38261.1| cold-shock DEAD box protein A [Escherichia coli 99.0848]
gi|444570338|gb|ELV46869.1| cold-shock DEAD box protein A [Escherichia coli 99.1753]
gi|444574294|gb|ELV50612.1| cold-shock DEAD box protein A [Escherichia coli 99.1775]
gi|444577501|gb|ELV53626.1| cold-shock DEAD box protein A [Escherichia coli 99.1793]
gi|444590766|gb|ELV66065.1| cold-shock DEAD box protein A [Escherichia coli PA11]
gi|444591000|gb|ELV66297.1| cold-shock DEAD box protein A [Escherichia coli ATCC 700728]
gi|444591819|gb|ELV67081.1| cold-shock DEAD box protein A [Escherichia coli 99.1805]
gi|444604583|gb|ELV79248.1| cold-shock DEAD box protein A [Escherichia coli PA13]
gi|444605631|gb|ELV80272.1| cold-shock DEAD box protein A [Escherichia coli PA19]
gi|444613772|gb|ELV88022.1| cold-shock DEAD box protein A [Escherichia coli PA2]
gi|444621450|gb|ELV95426.1| cold-shock DEAD box protein A [Escherichia coli PA47]
gi|444622048|gb|ELV96013.1| cold-shock DEAD box protein A [Escherichia coli PA48]
gi|444628279|gb|ELW02023.1| cold-shock DEAD box protein A [Escherichia coli PA8]
gi|444638822|gb|ELW12147.1| cold-shock DEAD box protein A [Escherichia coli 99.1781]
gi|444643332|gb|ELW16490.1| cold-shock DEAD box protein A [Escherichia coli 99.1762]
gi|444652790|gb|ELW25539.1| cold-shock DEAD box protein A [Escherichia coli PA35]
gi|444658121|gb|ELW30583.1| cold-shock DEAD box protein A [Escherichia coli 3.4880]
gi|444661231|gb|ELW33558.1| cold-shock DEAD box protein A [Escherichia coli 95.0083]
gi|444668263|gb|ELW40285.1| cold-shock DEAD box protein A [Escherichia coli 99.0670]
gi|449317774|gb|EMD07858.1| ATP-dependent RNA helicase DeaD [Escherichia coli SEPT362]
Length = 629
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 202/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L LQ
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|200386509|ref|ZP_03213121.1| cold-shock DEAD box protein A [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|199603607|gb|EDZ02152.1| cold-shock DEAD box protein A [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
Length = 629
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/365 (35%), Positives = 201/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L L
Sbjct: 8 FADLGLKAPILEALTDLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKTAAFSLPLLNN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMSGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|387508567|ref|YP_006160823.1| ATP-dependent RNA helicase DeaD [Escherichia coli O55:H7 str.
RM12579]
gi|419127875|ref|ZP_13672750.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC5C]
gi|419133274|ref|ZP_13678102.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC5D]
gi|374360561|gb|AEZ42268.1| ATP-dependent RNA helicase DeaD [Escherichia coli O55:H7 str.
RM12579]
gi|377971736|gb|EHV35090.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC5C]
gi|377972824|gb|EHV36169.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC5D]
Length = 629
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 202/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L LQ
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVA-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|255731175|ref|XP_002550512.1| eukaryotic initiation factor 4A-12 [Candida tropicalis MYA-3404]
gi|240132469|gb|EER32027.1| eukaryotic initiation factor 4A-12 [Candida tropicalis MYA-3404]
Length = 399
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 135/355 (38%), Positives = 209/355 (58%), Gaps = 8/355 (2%)
Query: 41 VGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVF 100
+ +H + F LKPELL+ I GFE PS +Q I Q I G D I QA+SG GKTA F
Sbjct: 22 IKVHRT-FESMKLKPELLKGIYAYGFEAPSAIQSRAIMQIISGKDTIAQAQSGTGKTATF 80
Query: 101 VLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKD 160
+ L+ + + AL+L TRELA QI + + Y+ +I GG N+ D
Sbjct: 81 SIGMLEVIDTKSKECQALILSPTRELATQIQNVVKHLGDYM-NIHTHACIGGKNVG--DD 137
Query: 161 LLK-NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
+ K + QIV GTPGR+L + + ++L +N++ ILDE D++ + + + EI+K
Sbjct: 138 VKKLQQGQQIVSGTPGRVLDVIKRRNLQTRNIKVLILDEADELF-TKGFKEQIYEIYKHL 196
Query: 220 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRK 278
P QV++ SATLS+E+ + KF DP++I V + +++L G+ Q+Y++ + + K
Sbjct: 197 PPAVQVVVVSATLSREVLEMTSKFTTDPVKILVKQD-EISLSGIKQYYVQCEQEDWKFDT 255
Query: 279 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGN 338
L DL D L Q VIF + + L + + NF + +H M Q+ER + F+ GN
Sbjct: 256 LCDLYDNLTITQAVIFCNTKLKVNWLTDQMRKQNFTVVSMHGDMKQDERESIMNDFRTGN 315
Query: 339 KRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
R+L++TD+ RGID+++V++VINYD+P + Y+HR+GR+GRFG KG AI ++
Sbjct: 316 SRVLISTDVWARGIDVQQVSLVINYDLPTDKENYIHRIGRSGRFGRKGTAINLIT 370
>gi|420260771|ref|ZP_14763441.1| ATP-dependent RNA helicase DeaD [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|404511792|gb|EKA25657.1| ATP-dependent RNA helicase DeaD [Yersinia enterocolitica subsp.
enterocolitica WA-314]
Length = 654
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 130/372 (34%), Positives = 205/372 (55%), Gaps = 4/372 (1%)
Query: 46 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTL 105
+ F D L +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L L
Sbjct: 7 TSFADLGLSAPILSALTDLGYEKPSPIQLECIPHLLNGRDVLGMAQTGSGKTAAFGLPLL 66
Query: 106 QQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE 165
+P+ LVL TRELA Q+ FS ++ + V YGG + L+ +
Sbjct: 67 HNIDPSLKAPQVLVLAPTRELAIQVAEALSSFSKHMNGVNVVALYGGQRYDVQLRALR-Q 125
Query: 166 CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQV 225
PQ+VVGTPGR+L + L+L N+ +LDE D+ML + DV+ I P + Q
Sbjct: 126 GPQVVVGTPGRLLDHLKRGTLNLSNLSGLVLDEADEMLR-MGFIEDVENILAQIPAEHQT 184
Query: 226 MMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDA 285
+FSAT+ + IR + ++FM++P E+ + + T + Q Y + + KN L L+A
Sbjct: 185 ALFSATMPEAIRRITRRFMKEPQEVRIQS-SMTTRPDISQSYWVVDGVRKNDALVRFLEA 243
Query: 286 LDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVAT 345
DF+ +IFV++ + E+ + L + S ++ M+Q R + K G IL+AT
Sbjct: 244 EDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQAAREQTLERLKNGRLDILIAT 303
Query: 346 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVS 405
D+ RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + +L +
Sbjct: 304 DVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVDR-RERRLLQNIE 362
Query: 406 KFMFLLIGSFQC 417
+ M + I Q
Sbjct: 363 RTMKMTIPPVQL 374
>gi|308162755|gb|EFO65133.1| Translation initiation factor eIF-4A, putative [Giardia lamblia
P15]
Length = 391
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 138/360 (38%), Positives = 203/360 (56%), Gaps = 5/360 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D L P+LL I G++ PS +Q + I I G D I QA+SG GKTA F + LQ+
Sbjct: 22 FDDMNLHPDLLFGIFTYGYKTPSAIQSQAIVPIISGKDTIAQAQSGTGKTAAFTIGMLQR 81
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ A++L TRELA Q + + L +++VA GG ++ D+ +
Sbjct: 82 IDLALKSPQAIILSPTRELALQTLKVVDGIGSRL-EVQVAQCIGGT--QVDDDIAAAQSC 138
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
++V TPGR+L+L + K ++ NV+ +LDE D+ML S + I K D Q+++
Sbjct: 139 HLIVATPGRLLSLLQKKYVTTSNVKMVVLDEADEML-SRGFTEQIVSIMKFMNADIQIVL 197
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
SATL EI + ++FM+DP+ I V EA+LTL G+ Q+ + L + K + D+ L
Sbjct: 198 VSATLPPEILELTRQFMRDPVSILVK-EAELTLDGIRQYVVDLQDAWKAEVVEDIYKVLS 256
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
Q VIF S+ R EL + L CIHS + Q ER F+ G RIL+AT++
Sbjct: 257 VQQGVIFCNSIGRVKELAEKLKSAGHTLSCIHSELDQAERNKIMGEFRSGQTRILIATNI 316
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
+ RGID++ V++VINYD+P +TYLHR+GR+GRFG KG+AI FV+ + KF
Sbjct: 317 IARGIDVQNVSLVINYDIPREPETYLHRIGRSGRFGRKGVAINFVTEKDKQSMQAITDKF 376
>gi|123440819|ref|YP_001004810.1| ATP-dependent RNA helicase DeaD [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122087780|emb|CAL10566.1| cold-shock dead-box protein A [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 657
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 130/372 (34%), Positives = 205/372 (55%), Gaps = 4/372 (1%)
Query: 46 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTL 105
+ F D L +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L L
Sbjct: 7 TSFADLGLSAPILSALTDLGYEKPSPIQLECIPHLLNGRDVLGMAQTGSGKTAAFGLPLL 66
Query: 106 QQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE 165
+P+ LVL TRELA Q+ FS ++ + V YGG + L+ +
Sbjct: 67 HNIDPSLKAPQVLVLAPTRELAIQVAEALSSFSKHMNGVNVVALYGGQRYDVQLRALR-Q 125
Query: 166 CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQV 225
PQ+VVGTPGR+L + L+L N+ +LDE D+ML + DV+ I P + Q
Sbjct: 126 GPQVVVGTPGRLLDHLKRGTLNLSNLSGLVLDEADEMLR-MGFIEDVENILAQIPAEHQT 184
Query: 226 MMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDA 285
+FSAT+ + IR + ++FM++P E+ + + T + Q Y + + KN L L+A
Sbjct: 185 ALFSATMPEAIRRITRRFMKEPQEVRIQS-SMTTRPDISQSYWVVDGVRKNDALVRFLEA 243
Query: 286 LDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVAT 345
DF+ +IFV++ + E+ + L + S ++ M+Q R + K G IL+AT
Sbjct: 244 EDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQAAREQTLERLKNGRLDILIAT 303
Query: 346 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVS 405
D+ RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + +L +
Sbjct: 304 DVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVDR-RERRLLQNIE 362
Query: 406 KFMFLLIGSFQC 417
+ M + I Q
Sbjct: 363 RTMKMTIPPVQL 374
>gi|432681892|ref|ZP_19917251.1| cold-shock DEAD box protein A [Escherichia coli KTE143]
gi|431218062|gb|ELF15546.1| cold-shock DEAD box protein A [Escherichia coli KTE143]
Length = 629
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 202/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L LQ
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|416341087|ref|ZP_11675808.1| Cold-shock DEAD-box protein A [Escherichia coli EC4100B]
gi|320202076|gb|EFW76651.1| Cold-shock DEAD-box protein A [Escherichia coli EC4100B]
Length = 629
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 202/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L LQ
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|420337506|ref|ZP_14839068.1| cold-shock DEAD box protein A [Shigella flexneri K-315]
gi|391259380|gb|EIQ18454.1| cold-shock DEAD box protein A [Shigella flexneri K-315]
Length = 629
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 202/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L LQ
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|154308886|ref|XP_001553778.1| eukaryotic initiation factor 4A-12 [Botryotinia fuckeliana B05.10]
gi|160385734|sp|A6S4N4.1|FAL1_BOTFB RecName: Full=ATP-dependent RNA helicase fal1
gi|347838607|emb|CCD53179.1| similar to eukaryotic translation initiation factor eIF-4A subunit
[Botryotinia fuckeliana]
Length = 399
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 139/349 (39%), Positives = 206/349 (59%), Gaps = 7/349 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F+D LK LLR I G+E PS VQ I Q G D I QA+SG GKTA F +S LQ
Sbjct: 27 FQDMHLKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISMLQV 86
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ + ALVL TRELA QI Y+ +++ GG N+ +D+ K +
Sbjct: 87 IDTAVRETQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVG--EDIRKLDYG 143
Query: 168 Q-IVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
Q IV GTPGR+ + R ++L ++++ +LDE D++L R + ++++ P QV+
Sbjct: 144 QHIVSGTPGRVADMIRRRNLRTRHIKMLVLDEADELLNR-GFREQIYDVYRYLPPATQVV 202
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL-SELEKNRKLNDLLDA 285
+ SATL ++ + KFM DP+ I V + +LTL GL Q++I + E K L DL D
Sbjct: 203 VVSATLPYDVLDMTTKFMTDPVRILVKRD-ELTLEGLKQYFIAVEKEDWKFDTLCDLYDT 261
Query: 286 LDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVAT 345
L Q VIF + + L + E NF +H M Q+ER + + F++GN R+L++T
Sbjct: 262 LTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLIST 321
Query: 346 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSS 394
D+ RGID+++V++VINYD+P + + Y+HR+GR+GRFG KG+AI FV+S
Sbjct: 322 DVWARGIDVQQVSLVINYDLPVNRENYIHRIGRSGRFGRKGVAINFVTS 370
>gi|224009464|ref|XP_002293690.1| eukaryotic translation initiation factor 4A [Thalassiosira
pseudonana CCMP1335]
gi|220970362|gb|EED88699.1| eukaryotic translation initiation factor 4A [Thalassiosira
pseudonana CCMP1335]
Length = 369
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 135/353 (38%), Positives = 206/353 (58%), Gaps = 6/353 (1%)
Query: 56 ELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQV 115
ELLR I GFE PS +Q I +LG D+I QA+SG GKTA F + TL + +P +
Sbjct: 6 ELLRGIYAYGFEKPSAIQQRAIKPTMLGRDLIAQAQSGTGKTATFAIGTLAKLDPKLREC 65
Query: 116 TALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPG 175
+L+L TRELA QI Y+ +++V GG ++ L+ +VVGTPG
Sbjct: 66 QSLILAPTRELAQQIQKVVIALGDYM-ELQVHACVGGTAVRDDIRTLQGGV-HVVVGTPG 123
Query: 176 RILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKE 235
R+ + + L L ++R F LDE D+ML S + + +IFK P QV +FSAT+ +
Sbjct: 124 RVYDMINRRALRLDSIRQFFLDEADEML-SRGFKDQIYDIFKFLPESVQVCLFSATMPLD 182
Query: 236 IRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIF 294
+ V ++FM+DP+ I V + +LTL G+ Q YI + E K L DL + L Q +I+
Sbjct: 183 VLEVTQRFMRDPVRILVKKD-ELTLEGIKQFYIAVEREEWKLDTLCDLYETLTITQAIIY 241
Query: 295 VKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDI 354
+ + L + + E +F C+H M Q ER + F+ G+ R+L+ TDL+ RGID+
Sbjct: 242 CNTRRKVDWLQEQMQERDFTVSCMHGDMDQRERDIIMREFRSGSSRVLITTDLLARGIDV 301
Query: 355 ERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
++V++VIN+D+P + + Y+HR+GR+GRFG KG+AI F++ D L + +F
Sbjct: 302 QQVSLVINFDLPTNRENYIHRIGRSGRFGRKGVAINFLTEG-DVRYLRDIEQF 353
>gi|125839926|ref|XP_001340860.1| PREDICTED: probable ATP-dependent RNA helicase DDX6 [Danio rerio]
Length = 483
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 134/348 (38%), Positives = 203/348 (58%), Gaps = 6/348 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D+ LK ELL I + G+E PS +Q E IP A+ G D++ +AK+G GK+ +++ L++
Sbjct: 90 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 149
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
+ + A+VL TRELA Q+ S +L IKV GG N++ D+++ +E
Sbjct: 150 IDLKKDYIQAIVLVPTRELALQVSQISINMSKHLGGIKVMATTGGTNLR--DDIMRLDEI 207
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
+++ TPGRIL L + + V+ ++DE DK+L S D +++I P +Q++
Sbjct: 208 VHVIIATPGRILDLIKKGVAKVDKVQMAVMDEADKLL-SQDFVVLIEDIISFLPKKRQIL 266
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
++SAT ++ K +Q P EI + DE LTL G+ Q+Y ++E +K LN L L
Sbjct: 267 LYSATFPISVQKFMTKHLQKPYEINLMDE--LTLKGITQYYAYVTERQKVHCLNTLFSRL 324
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S R L K + + + IH+ M QE R + F+ G R LV TD
Sbjct: 325 QINQSIIFCNSTQRVELLAKKITQLGYSCFYIHAKMMQEYRNRVFHDFRNGLCRNLVCTD 384
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSS 394
L RGIDI+ VN+VIN+D P +A+TYLHR+GR+GR+G GLAI ++S
Sbjct: 385 LFTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLITS 432
>gi|432836126|ref|ZP_20069659.1| cold-shock DEAD box protein A [Escherichia coli KTE136]
gi|431382873|gb|ELG67016.1| cold-shock DEAD box protein A [Escherichia coli KTE136]
Length = 629
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 202/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L LQ
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|345569756|gb|EGX52585.1| hypothetical protein AOL_s00007g573 [Arthrobotrys oligospora ATCC
24927]
Length = 517
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 139/347 (40%), Positives = 199/347 (57%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F + +K ELL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ L++
Sbjct: 45 FEELYIKRELLMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPALER 104
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
+ AL+L TRELA Q + +L I V V GG +K D+++ NE
Sbjct: 105 VNSKSPKTQALILVPTRELALQTSQVCKTLGKHL-GINVMVTTGGTVLK--DDIIRLNEA 161
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
++VGTPGRIL LA FI+DE DK+L S + ++++ P D+Q+M
Sbjct: 162 VHVLVGTPGRILDLAGKGVADFSECPTFIMDEADKLL-SPEFTPIIEQLLAYFPSDRQIM 220
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
+FSAT ++ K ++ P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 221 LFSATFPLVVKSFMDKHLKQPYEINLMDE--LTLRGVTQYYAFVEEKQKVHCLNTLFSKL 278
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF S +R L K + E + H+ M Q R + F+ G R LV +D
Sbjct: 279 QINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMLQNHRNRVFHDFRNGVCRNLVCSD 338
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI ++
Sbjct: 339 LLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLIN 385
>gi|291086515|ref|ZP_06356033.2| ATP-dependent RNA helicase DeaD [Citrobacter youngae ATCC 29220]
gi|291067655|gb|EFE05764.1| ATP-dependent RNA helicase DeaD [Citrobacter youngae ATCC 29220]
Length = 658
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/373 (35%), Positives = 204/373 (54%), Gaps = 4/373 (1%)
Query: 40 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 99
Y+ + F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA
Sbjct: 17 YMAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKTAA 76
Query: 100 FVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHK 159
F L L +P LVL TRELA Q+ FS ++ + V YGG +
Sbjct: 77 FSLPLLNNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQL 136
Query: 160 DLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
L+ + PQIVVGTPGR+L + L L + +LDE D+ML + DV+ I
Sbjct: 137 RALR-QGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQI 194
Query: 220 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKL 279
P Q +FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L
Sbjct: 195 PEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEAL 253
Query: 280 NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNK 339
L+A DF+ +IFV++ + E+ + L + S ++ M+Q R + K+G
Sbjct: 254 VRFLEAEDFDAAIIFVRTKNATLEVAEALERSGYSSAALNGDMNQSLREQTLERLKDGRL 313
Query: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSD 399
IL+ATD+ RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + +
Sbjct: 314 DILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERR 372
Query: 400 ILNQVSKFMFLLI 412
+L + + M L I
Sbjct: 373 LLRNIERTMKLTI 385
>gi|332160085|ref|YP_004296662.1| ATP-dependent RNA helicase DeaD [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|386311120|ref|YP_006007176.1| cold-shock DEAD-box protein A [Yersinia enterocolitica subsp.
palearctica Y11]
gi|33332423|gb|AAQ11420.1| DeaD box RNA helicase [Yersinia enterocolitica]
gi|318607355|emb|CBY28853.1| cold-shock DEAD-box protein A [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325664315|gb|ADZ40959.1| ATP-dependent RNA helicase DeaD [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330862020|emb|CBX72187.1| cold-shock DEAD box protein A [Yersinia enterocolitica W22703]
Length = 657
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 130/372 (34%), Positives = 205/372 (55%), Gaps = 4/372 (1%)
Query: 46 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTL 105
+ F D L +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L L
Sbjct: 7 TSFADLGLSAPILSALTDLGYEKPSPIQLECIPHLLNGRDVLGMAQTGSGKTAAFGLPLL 66
Query: 106 QQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE 165
+P+ LVL TRELA Q+ FS ++ + V YGG + L+ +
Sbjct: 67 HNIDPSLKAPQVLVLAPTRELAIQVAEALSSFSKHMNGVNVVALYGGQRYDVQLRALR-Q 125
Query: 166 CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQV 225
PQ+VVGTPGR+L + L+L N+ +LDE D+ML + DV+ I P + Q
Sbjct: 126 GPQVVVGTPGRLLDHLKRGTLNLSNLSGLVLDEADEMLR-MGFIEDVENILAQIPAEHQT 184
Query: 226 MMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDA 285
+FSAT+ + IR + ++FM++P E+ + + T + Q Y + + KN L L+A
Sbjct: 185 ALFSATMPEAIRRITRRFMKEPQEVRIQS-SMTTRPDISQSYWVVDGVRKNDALVRFLEA 243
Query: 286 LDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVAT 345
DF+ +IFV++ + E+ + L + S ++ M+Q R + K G IL+AT
Sbjct: 244 EDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQAAREQTLERLKNGRLDILIAT 303
Query: 346 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVS 405
D+ RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + +L +
Sbjct: 304 DVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVDR-RERRLLQNIE 362
Query: 406 KFMFLLIGSFQC 417
+ M + I Q
Sbjct: 363 RTMKMTIPPVQL 374
>gi|170766108|ref|ZP_02900919.1| cold-shock DEAD box protein A [Escherichia albertii TW07627]
gi|170125254|gb|EDS94185.1| cold-shock DEAD box protein A [Escherichia albertii TW07627]
Length = 627
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 202/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L LQ
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|158333359|ref|YP_001514531.1| DEAD/DEAH box helicase [Acaryochloris marina MBIC11017]
gi|158303600|gb|ABW25217.1| DEAD/DEAH box RNA helicase [Acaryochloris marina MBIC11017]
Length = 574
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 133/349 (38%), Positives = 200/349 (57%), Gaps = 3/349 (0%)
Query: 46 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTL 105
S F D + P LL+A+ + G+E PS +Q + IP + G D++ QA++G GKTA F L L
Sbjct: 7 SRFADLAIAPPLLQAVEEVGYESPSPIQAQSIPPLLAGRDLLGQAQTGTGKTAAFALPLL 66
Query: 106 QQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE 165
Q + + LVL TRELA Q+ + ++ +LP +A YGG NI L+
Sbjct: 67 SQLDLSQAHPQILVLAPTRELAIQVAEAMQTYARHLPGFHIATLYGGQNISTQLRQLRRG 126
Query: 166 CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQV 225
+VVGTPGR++ L L+N+ +LDE D+ML + DV++I TP +QV
Sbjct: 127 V-HVVVGTPGRLIDHLLRGTLKLENLSTVVLDEADEMLR-MGFIEDVEKILDETPKGRQV 184
Query: 226 MMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDA 285
+FSAT+ IR V ++ + DP+EI + + T+ + Q Y ++ L K L +L+
Sbjct: 185 ALFSATMPSAIRRVAQRHLNDPVEIKIKSKTA-TVSTVTQRYWQVRGLSKLDALTRILEV 243
Query: 286 LDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVAT 345
DF +++FV++ AAEL + L + S + +SQ R + K G I+VAT
Sbjct: 244 EDFEAMLVFVRTKVMAAELAEKLEARGYSSAVLSGDISQPLREKTIERIKAGRLDIIVAT 303
Query: 346 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSS 394
D+ RG+D+ER++ VINYD+P +TY+HR+GR GR G +G AI FVSS
Sbjct: 304 DVAARGLDVERISHVINYDIPYDTETYVHRIGRTGRAGRQGDAILFVSS 352
>gi|410086376|ref|ZP_11283088.1| Cold-shock DEAD-box protein A [Morganella morganii SC01]
gi|409767221|gb|EKN51301.1| Cold-shock DEAD-box protein A [Morganella morganii SC01]
Length = 635
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/365 (35%), Positives = 204/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D L ++L A+ D G+E PS +Q +CIP + G DV+ A++G GKTA F L L
Sbjct: 9 FADIGLSADILTALDDLGYEKPSPIQQQCIPHLLAGRDVLGMAQTGSGKTAAFGLPLLNN 68
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+PN LVL TRELA Q+ FS ++ ++ V YGG + L+ + P
Sbjct: 69 IDPNLRAPQILVLAPTRELAVQVAEACTDFSKHMRNVNVVALYGGQRYDVQLRALR-QGP 127
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
Q+VVGTPGR+L + L L N++ +LDE D+ML + DV+ I P + Q +
Sbjct: 128 QVVVGTPGRLLDHLKRGTLDLSNLKGLVLDEADEMLR-MGFIEDVETIMSQIPAEHQTAL 186
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM+DP E+ + T + Q Y K+ L L+A D
Sbjct: 187 FSATMPEAIRRITRRFMKDPQEVRIQTSVT-TRPDISQSYWTAYGARKSEALVRFLEAED 245
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 246 FDAAIIFVRTKNATLEVAETLERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 305
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P A++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 306 AARGLDVERISLVVNYDIPMDAESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 364
Query: 408 MFLLI 412
M L I
Sbjct: 365 MKLTI 369
>gi|66825831|ref|XP_646270.1| DEAD/DEAH box helicase domain-containing protein [Dictyostelium
discoideum AX4]
gi|74897412|sp|Q55D61.1|IF4A_DICDI RecName: Full=Eukaryotic initiation factor 4A; Short=eIF-4A;
AltName: Full=ATP-dependent RNA helicase eIF4A; AltName:
Full=ATP-dependent RNA helicase tifA
gi|60474009|gb|EAL71946.1| DEAD/DEAH box helicase domain-containing protein [Dictyostelium
discoideum AX4]
Length = 405
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 140/362 (38%), Positives = 213/362 (58%), Gaps = 8/362 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F L+ ELLR I + GFE PS +Q I I G D I QA+SG GKTA F + LQ
Sbjct: 34 FESMGLREELLRGIFNYGFEKPSAIQQRAILPIIKGRDTIAQAQSGTGKTATFSIGALQC 93
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
E N L+L TRELA QI S ++ +I+V GG N+ D+ K E
Sbjct: 94 VEVNVRSPQVLILSPTRELAQQIQKVALALSEFM-NIQVHACVGGKNLS--DDVKKLETG 150
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
IV GTPGR+L + K L ++++ ILDE D+ML SL ++ + ++++ P+ Q++
Sbjct: 151 VHIVSGTPGRVLDMITRKSLPTRHIKMMILDEADEML-SLGFQQQINDVYRYLPNGTQIV 209
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL-SELEKNRKLNDLLDA 285
+ SATL++++ + +KFM P+ I + + +LTL G+ Q ++ + E K L D+ D+
Sbjct: 210 LVSATLTQDVVSMTEKFMTKPVRILLKRD-ELTLDGIKQFFVSVEKEDWKFGTLCDIYDS 268
Query: 286 LDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVAT 345
L Q VIF + + +L + + + NF +H M Q+ER K F+ G R+L+ T
Sbjct: 269 LTITQAVIFCNTKKKVDQLTEQMRDANFTVASMHGDMVQKEREEIIKSFRSGENRVLITT 328
Query: 346 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVS 405
D++ RGID+++V++VINYD+P + Y+HR+GR+GRFG KG+AI FV + SD IL +
Sbjct: 329 DILARGIDVQQVSLVINYDLPIDRENYIHRIGRSGRFGRKGVAINFVKN-SDIRILRDIE 387
Query: 406 KF 407
+F
Sbjct: 388 QF 389
>gi|448101712|ref|XP_004199627.1| Piso0_002166 [Millerozyma farinosa CBS 7064]
gi|359381049|emb|CCE81508.1| Piso0_002166 [Millerozyma farinosa CBS 7064]
Length = 399
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 135/354 (38%), Positives = 211/354 (59%), Gaps = 6/354 (1%)
Query: 41 VGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVF 100
+ IH + F LK ELL+ I GFE PS +Q I Q I G D + QA+SG GKTA F
Sbjct: 22 IKIHRT-FESMKLKHELLKGIYAYGFETPSAIQSRAIMQIITGKDTVAQAQSGTGKTATF 80
Query: 101 VLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKD 160
+ LQ + + AL+L TRELA QI + Y+ +I+ GG +
Sbjct: 81 SIGMLQVIDTKSKECQALILSTTRELAQQIQDVVKNLGDYM-NIQTHACIGGTQVGEDAK 139
Query: 161 LLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTP 220
L+ + QIV GTPGR++ L + ++LS ++++ ILDE D+++ + + ++ EI+++ P
Sbjct: 140 KLQ-QGRQIVSGTPGRVVDLIKRQNLSTRHIKMLILDEADELM-TRGFKENIYEIYRLLP 197
Query: 221 HDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKL 279
+ QV++ SATLS+E+ V KFM DP++I V + ++TL G+ Q++I+ + E K L
Sbjct: 198 SNVQVVVVSATLSREVLEVTSKFMTDPVKILVKRD-EITLEGIKQYHIQCEKEEWKFDTL 256
Query: 280 NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNK 339
DL D+L Q VIF + + L + F +H M Q+ER T F+ G+
Sbjct: 257 CDLYDSLTITQAVIFCNTKVKVNWLAHQMKTAGFAVDLMHGDMKQDERDTVMNNFRSGSS 316
Query: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
R+L++TD+ RGID+++V++VINYD+P + Y+HR+GR+GRFG KG AI+ ++
Sbjct: 317 RVLISTDVWARGIDVQQVSLVINYDLPLHKENYIHRIGRSGRFGRKGAAISLLT 370
>gi|303319503|ref|XP_003069751.1| Eukaryotic translation initiation factor, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|142985565|sp|Q1DTB3.2|FAL1_COCIM RecName: Full=ATP-dependent RNA helicase FAL1
gi|240109437|gb|EER27606.1| Eukaryotic translation initiation factor, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|320040787|gb|EFW22720.1| ATP-dependent RNA helicase FAL1 [Coccidioides posadasii str.
Silveira]
gi|392865454|gb|EAS31245.2| ATP-dependent RNA helicase FAL1 [Coccidioides immitis RS]
Length = 399
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 138/349 (39%), Positives = 205/349 (58%), Gaps = 7/349 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK LLR I GFE PS +Q I Q G D I QA+SG GKTA F +S LQ
Sbjct: 27 FDDMHLKENLLRGIYAYGFESPSAIQSRAIVQICKGRDTIAQAQSGTGKTATFAISILQV 86
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ + ALVL TRELA QI + Y+ +++ GG N+ D+ K +
Sbjct: 87 IDTALRETQALVLSPTRELATQIQNVIMAVGDYM-NVQCHACIGGTNVG--DDIRKLDHG 143
Query: 168 Q-IVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
Q +V GTPGR+ + R + L ++++ +LDE D +L + R + ++++ P QV+
Sbjct: 144 QHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADDLL-ARGFREQIYDVYRYLPPATQVV 202
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDA 285
+ SATL ++ + KFM DP+ I V + +LTL GL Q++I + + E K L DL D
Sbjct: 203 VLSATLPYDVLSMTTKFMTDPVRILVKRD-ELTLEGLKQYFIAVEKEEWKFDTLCDLYDT 261
Query: 286 LDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVAT 345
L Q VIF + + L + E NF +H M Q+ER + + F++GN R+L++T
Sbjct: 262 LTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLIST 321
Query: 346 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSS 394
D+ RGID+++V++VINYD+P + + Y+HR+GR+GRFG KG+AI FV+S
Sbjct: 322 DVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTS 370
>gi|25511900|pir||AB0901 ATP-dependent RNA helicase (dead-box protein) [imported] -
Salmonella enterica subsp. enterica serovar Typhi
(strain CT18)
gi|16504348|emb|CAD07800.1| ATP-dependent RNA helicase (dead-box protein) [Salmonella enterica
subsp. enterica serovar Typhi]
gi|29139168|gb|AAO70736.1| ATP-dependent RNA helicase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
Length = 646
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/373 (35%), Positives = 204/373 (54%), Gaps = 4/373 (1%)
Query: 40 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 99
Y+ + F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA
Sbjct: 17 YMAEFETTFADLGLKAPILEALTDLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKTAA 76
Query: 100 FVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHK 159
F L L +P LVL TRELA Q+ FS ++ + V YGG +
Sbjct: 77 FSLPLLNNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQL 136
Query: 160 DLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
L+ + PQIVVGTPGR+L + L L + +LDE D+ML + DV+ I
Sbjct: 137 RALR-QGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQI 194
Query: 220 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKL 279
P Q +FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L
Sbjct: 195 PEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEAL 253
Query: 280 NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNK 339
L+A DF+ +IFV++ + E+ + L + S ++ M+Q R + K+G
Sbjct: 254 VRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRL 313
Query: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSD 399
IL+ATD+ RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + +
Sbjct: 314 DILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERR 372
Query: 400 ILNQVSKFMFLLI 412
+L + + M L I
Sbjct: 373 LLRNIERTMKLTI 385
>gi|159117719|ref|XP_001709079.1| Translation initiation factor eIF-4A, putative [Giardia lamblia
ATCC 50803]
gi|157437194|gb|EDO81405.1| Translation initiation factor eIF-4A, putative [Giardia lamblia
ATCC 50803]
Length = 391
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 136/346 (39%), Positives = 200/346 (57%), Gaps = 5/346 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D L P+LL I G++ PS +Q + I I G D I QA+SG GKTA F + LQ+
Sbjct: 22 FDDMNLHPDLLFGIFTYGYKIPSAIQSQAIVPIISGKDTIAQAQSGTGKTAAFTIGMLQR 81
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ A++L TRELA Q + + L ++VA GG ++ D+ +
Sbjct: 82 IDIGLKSPQAIILSPTRELALQTLKVVDGIGSRL-KVQVAQCIGGT--QVDDDIAAAQSC 138
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
++V TPGR+L+L + K ++ NV+ +LDE D+ML S + I K D Q+++
Sbjct: 139 HLIVATPGRLLSLLQKKYVTTSNVKMVVLDEADEML-SRGFTEQIVSIMKFMNADIQIVL 197
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
SATL EI + ++FM+DP+ I V EA+LTL G+ Q+ ++L + K + D+ L
Sbjct: 198 VSATLPPEILELTRQFMRDPVSILVK-EAELTLDGIRQYVVELQDAWKTEVVEDIYKVLS 256
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
Q VIF S+ R EL + L CIHS + Q ER F+ G RIL+AT++
Sbjct: 257 VQQGVIFCNSIGRVKELAEKLKSAGHTLSCIHSELDQAERNKIMGEFRSGQTRILIATNI 316
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
+ RGID++ V++VINYD+P +TYLHR+GR+GRFG KG+AI FV+
Sbjct: 317 IARGIDVQNVSLVINYDIPREPETYLHRIGRSGRFGRKGVAINFVT 362
>gi|423141808|ref|ZP_17129446.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
gi|379050980|gb|EHY68872.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
Length = 629
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/365 (35%), Positives = 201/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L L
Sbjct: 8 FADLGLKAPILEALTDLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKTAAFSLPLLNN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|432604003|ref|ZP_19840234.1| cold-shock DEAD box protein A [Escherichia coli KTE66]
gi|431138301|gb|ELE40137.1| cold-shock DEAD box protein A [Escherichia coli KTE66]
Length = 629
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 202/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L LQ
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|387874673|ref|YP_006304977.1| ATP-dependent rna helicase, dead/deah box family protein
[Mycobacterium sp. MOTT36Y]
gi|443304605|ref|ZP_21034393.1| ATP-dependent rna helicase, dead/deah box family protein
[Mycobacterium sp. H4Y]
gi|386788131|gb|AFJ34250.1| ATP-dependent rna helicase, dead/deah box family protein
[Mycobacterium sp. MOTT36Y]
gi|442766169|gb|ELR84163.1| ATP-dependent rna helicase, dead/deah box family protein
[Mycobacterium sp. H4Y]
Length = 567
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 126/353 (35%), Positives = 195/353 (55%), Gaps = 3/353 (0%)
Query: 41 VGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVF 100
G S+ F D + P +LRA+ D G+E P+ +Q IP + G DV+ A++G GKTA F
Sbjct: 8 TGAASTTFADLQIHPSVLRAVADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAF 67
Query: 101 VLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKD 160
+ L + + ALVL TRELA Q+ F R+ +LP I V YGG + +
Sbjct: 68 AIPILSKIDVTSTATQALVLAPTRELALQVAEAFSRYGAHLPKINVLPIYGGSSYSVQLA 127
Query: 161 LLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTP 220
L+ +VVGTPGR++ L L +V + +LDE D+ML ++ +V I TP
Sbjct: 128 GLRRGA-HVVVGTPGRVIDHLERGTLDLSHVDYLVLDEADEML-TMGFAEEVDRILSETP 185
Query: 221 HDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLN 280
KQV +FSAT+ IR + K++ DP+E+ + T + Q YI+++ K L
Sbjct: 186 EYKQVALFSATMPPAIRKLTTKYLHDPLEVSTKAKTA-TAENISQRYIQVAGPRKMDALT 244
Query: 281 DLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKR 340
+L+ F +++FV++ E+ + L F + I+ + Q +R K+G+
Sbjct: 245 RVLEVEPFEAMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTVAALKDGSID 304
Query: 341 ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
ILVATD+ RG+D+ER++ V+NYD+P ++Y+HR+GR GR G G A+ FVS
Sbjct: 305 ILVATDVAARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGTALLFVS 357
>gi|387618460|ref|YP_006121482.1| ATP-dependent RNA helicase DeaD [Escherichia coli O83:H1 str. NRG
857C]
gi|312947721|gb|ADR28548.1| ATP-dependent RNA helicase DeaD [Escherichia coli O83:H1 str. NRG
857C]
Length = 629
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 202/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L LQ
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|218701933|ref|YP_002409562.1| ATP-dependent RNA helicase DeaD [Escherichia coli IAI39]
gi|386625970|ref|YP_006145698.1| ATP-dependent RNA helicase [Escherichia coli O7:K1 str. CE10]
gi|218371919|emb|CAR19775.1| ATP-dependent RNA helicase [Escherichia coli IAI39]
gi|349739706|gb|AEQ14412.1| ATP-dependent RNA helicase [Escherichia coli O7:K1 str. CE10]
Length = 629
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 202/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L LQ
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|433131725|ref|ZP_20317155.1| cold-shock DEAD box protein A [Escherichia coli KTE163]
gi|431644462|gb|ELJ12124.1| cold-shock DEAD box protein A [Escherichia coli KTE163]
Length = 629
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 202/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L LQ
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|432767537|ref|ZP_20001931.1| cold-shock DEAD box protein A [Escherichia coli KTE50]
gi|432963623|ref|ZP_20153042.1| cold-shock DEAD box protein A [Escherichia coli KTE202]
gi|433064619|ref|ZP_20251530.1| cold-shock DEAD box protein A [Escherichia coli KTE125]
gi|431322701|gb|ELG10286.1| cold-shock DEAD box protein A [Escherichia coli KTE50]
gi|431472198|gb|ELH52090.1| cold-shock DEAD box protein A [Escherichia coli KTE202]
gi|431579319|gb|ELI51903.1| cold-shock DEAD box protein A [Escherichia coli KTE125]
Length = 629
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 202/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L LQ
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|417138653|ref|ZP_11982304.1| cold-shock DEAD-box protein A [Escherichia coli 97.0259]
gi|417309694|ref|ZP_12096524.1| Cold-shock DEAD box protein A [Escherichia coli PCN033]
gi|417588276|ref|ZP_12239040.1| cold-shock DEAD box protein A [Escherichia coli STEC_C165-02]
gi|419935089|ref|ZP_14452176.1| ATP-dependent RNA helicase DeaD [Escherichia coli 576-1]
gi|422332639|ref|ZP_16413652.1| cold-shock DEAD box protein A [Escherichia coli 4_1_47FAA]
gi|432355170|ref|ZP_19598438.1| cold-shock DEAD box protein A [Escherichia coli KTE2]
gi|432403545|ref|ZP_19646290.1| cold-shock DEAD box protein A [Escherichia coli KTE26]
gi|432427806|ref|ZP_19670290.1| cold-shock DEAD box protein A [Escherichia coli KTE181]
gi|432462509|ref|ZP_19704643.1| cold-shock DEAD box protein A [Escherichia coli KTE204]
gi|432477502|ref|ZP_19719492.1| cold-shock DEAD box protein A [Escherichia coli KTE208]
gi|432490949|ref|ZP_19732813.1| cold-shock DEAD box protein A [Escherichia coli KTE213]
gi|432519364|ref|ZP_19756544.1| cold-shock DEAD box protein A [Escherichia coli KTE228]
gi|432539522|ref|ZP_19776416.1| cold-shock DEAD box protein A [Escherichia coli KTE235]
gi|432633042|ref|ZP_19868963.1| cold-shock DEAD box protein A [Escherichia coli KTE80]
gi|432642732|ref|ZP_19878558.1| cold-shock DEAD box protein A [Escherichia coli KTE83]
gi|432667729|ref|ZP_19903302.1| cold-shock DEAD box protein A [Escherichia coli KTE116]
gi|432840975|ref|ZP_20074435.1| cold-shock DEAD box protein A [Escherichia coli KTE140]
gi|432888470|ref|ZP_20102222.1| cold-shock DEAD box protein A [Escherichia coli KTE158]
gi|432914659|ref|ZP_20120075.1| cold-shock DEAD box protein A [Escherichia coli KTE190]
gi|433020297|ref|ZP_20208463.1| cold-shock DEAD box protein A [Escherichia coli KTE105]
gi|433054800|ref|ZP_20241967.1| cold-shock DEAD box protein A [Escherichia coli KTE122]
gi|433069485|ref|ZP_20256260.1| cold-shock DEAD box protein A [Escherichia coli KTE128]
gi|433160277|ref|ZP_20345104.1| cold-shock DEAD box protein A [Escherichia coli KTE177]
gi|433179997|ref|ZP_20364383.1| cold-shock DEAD box protein A [Escherichia coli KTE82]
gi|433204891|ref|ZP_20388643.1| cold-shock DEAD box protein A [Escherichia coli KTE95]
gi|338768640|gb|EGP23430.1| Cold-shock DEAD box protein A [Escherichia coli PCN033]
gi|345333163|gb|EGW65615.1| cold-shock DEAD box protein A [Escherichia coli STEC_C165-02]
gi|373246319|gb|EHP65773.1| cold-shock DEAD box protein A [Escherichia coli 4_1_47FAA]
gi|386157837|gb|EIH14175.1| cold-shock DEAD-box protein A [Escherichia coli 97.0259]
gi|388405425|gb|EIL65855.1| ATP-dependent RNA helicase DeaD [Escherichia coli 576-1]
gi|430873398|gb|ELB96972.1| cold-shock DEAD box protein A [Escherichia coli KTE2]
gi|430923931|gb|ELC44664.1| cold-shock DEAD box protein A [Escherichia coli KTE26]
gi|430952467|gb|ELC71531.1| cold-shock DEAD box protein A [Escherichia coli KTE181]
gi|430986440|gb|ELD03011.1| cold-shock DEAD box protein A [Escherichia coli KTE204]
gi|431002731|gb|ELD18238.1| cold-shock DEAD box protein A [Escherichia coli KTE208]
gi|431018997|gb|ELD32427.1| cold-shock DEAD box protein A [Escherichia coli KTE213]
gi|431048603|gb|ELD58579.1| cold-shock DEAD box protein A [Escherichia coli KTE228]
gi|431067381|gb|ELD75986.1| cold-shock DEAD box protein A [Escherichia coli KTE235]
gi|431168171|gb|ELE68425.1| cold-shock DEAD box protein A [Escherichia coli KTE80]
gi|431178469|gb|ELE78378.1| cold-shock DEAD box protein A [Escherichia coli KTE83]
gi|431198412|gb|ELE97235.1| cold-shock DEAD box protein A [Escherichia coli KTE116]
gi|431387605|gb|ELG71429.1| cold-shock DEAD box protein A [Escherichia coli KTE140]
gi|431414925|gb|ELG97476.1| cold-shock DEAD box protein A [Escherichia coli KTE158]
gi|431436825|gb|ELH18339.1| cold-shock DEAD box protein A [Escherichia coli KTE190]
gi|431528633|gb|ELI05340.1| cold-shock DEAD box protein A [Escherichia coli KTE105]
gi|431567680|gb|ELI40673.1| cold-shock DEAD box protein A [Escherichia coli KTE122]
gi|431580540|gb|ELI53099.1| cold-shock DEAD box protein A [Escherichia coli KTE128]
gi|431675060|gb|ELJ41206.1| cold-shock DEAD box protein A [Escherichia coli KTE177]
gi|431698543|gb|ELJ63570.1| cold-shock DEAD box protein A [Escherichia coli KTE82]
gi|431717308|gb|ELJ81407.1| cold-shock DEAD box protein A [Escherichia coli KTE95]
Length = 633
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 202/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L LQ
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|417709253|ref|ZP_12358278.1| cold-shock DEAD box protein A [Shigella flexneri VA-6]
gi|420333094|ref|ZP_14834739.1| cold-shock DEAD box protein A [Shigella flexneri K-1770]
gi|332998804|gb|EGK18400.1| cold-shock DEAD box protein A [Shigella flexneri VA-6]
gi|391247584|gb|EIQ06831.1| cold-shock DEAD box protein A [Shigella flexneri K-1770]
Length = 629
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 202/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L LQ
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|415776327|ref|ZP_11487911.1| cold-shock DEAD box protein A [Escherichia coli 3431]
gi|315617245|gb|EFU97854.1| cold-shock DEAD box protein A [Escherichia coli 3431]
Length = 632
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 202/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L LQ
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|307313131|ref|ZP_07592757.1| DEAD/DEAH box helicase domain protein [Escherichia coli W]
gi|378711381|ref|YP_005276274.1| DEAD/DEAH box helicase [Escherichia coli KO11FL]
gi|386610553|ref|YP_006126039.1| ATP-dependent RNA helicase [Escherichia coli W]
gi|386699868|ref|YP_006163705.1| ATP-dependent RNA helicase DeaD [Escherichia coli KO11FL]
gi|386711071|ref|YP_006174792.1| ATP-dependent RNA helicase DeaD [Escherichia coli W]
gi|306907042|gb|EFN37550.1| DEAD/DEAH box helicase domain protein [Escherichia coli W]
gi|315062470|gb|ADT76797.1| ATP-dependent RNA helicase [Escherichia coli W]
gi|323376942|gb|ADX49210.1| DEAD/DEAH box helicase domain protein [Escherichia coli KO11FL]
gi|383391395|gb|AFH16353.1| ATP-dependent RNA helicase DeaD [Escherichia coli KO11FL]
gi|383406763|gb|AFH13006.1| ATP-dependent RNA helicase DeaD [Escherichia coli W]
Length = 629
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 202/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L LQ
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|90111550|ref|NP_417631.2| ATP-dependent RNA helicase [Escherichia coli str. K-12 substr.
MG1655]
gi|110643403|ref|YP_671133.1| ATP-dependent RNA helicase DeaD [Escherichia coli 536]
gi|161486111|ref|NP_755783.2| ATP-dependent RNA helicase DeaD [Escherichia coli CFT073]
gi|161486429|ref|NP_838673.2| ATP-dependent RNA helicase DeaD [Shigella flexneri 2a str. 2457T]
gi|161984848|ref|YP_409545.2| ATP-dependent RNA helicase DeaD [Shigella boydii Sb227]
gi|161986443|ref|YP_312118.2| ATP-dependent RNA helicase DeaD [Shigella sonnei Ss046]
gi|170018586|ref|YP_001723540.1| ATP-dependent RNA helicase DeaD [Escherichia coli ATCC 8739]
gi|170082699|ref|YP_001732019.1| ATP-dependent RNA helicase DeaD [Escherichia coli str. K-12 substr.
DH10B]
gi|170684314|ref|YP_001745436.1| ATP-dependent RNA helicase DeaD [Escherichia coli SMS-3-5]
gi|191172194|ref|ZP_03033737.1| cold-shock DEAD box protein A [Escherichia coli F11]
gi|193062213|ref|ZP_03043309.1| cold-shock DEAD box protein A [Escherichia coli E22]
gi|194427708|ref|ZP_03060255.1| cold-shock DEAD box protein A [Escherichia coli B171]
gi|194438758|ref|ZP_03070844.1| cold-shock DEAD box protein A [Escherichia coli 101-1]
gi|215488480|ref|YP_002330911.1| ATP-dependent RNA helicase DeaD [Escherichia coli O127:H6 str.
E2348/69]
gi|218550447|ref|YP_002384238.1| ATP-dependent RNA helicase DeaD [Escherichia fergusonii ATCC 35469]
gi|218560234|ref|YP_002393147.1| ATP-dependent RNA helicase DeaD [Escherichia coli S88]
gi|218691454|ref|YP_002399666.1| ATP-dependent RNA helicase DeaD [Escherichia coli ED1a]
gi|218696869|ref|YP_002404536.1| ATP-dependent RNA helicase DeaD [Escherichia coli 55989]
gi|238902266|ref|YP_002928062.1| ATP-dependent RNA helicase DeaD [Escherichia coli BW2952]
gi|251786434|ref|YP_003000738.1| DeaD, DEAD-box RNA helicase [Escherichia coli BL21(DE3)]
gi|253772002|ref|YP_003034833.1| ATP-dependent RNA helicase DeaD [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254163106|ref|YP_003046214.1| ATP-dependent RNA helicase DeaD [Escherichia coli B str. REL606]
gi|254289856|ref|YP_003055604.1| ATP-dependent RNA helicase [Escherichia coli BL21(DE3)]
gi|260845977|ref|YP_003223755.1| ATP-dependent RNA helicase DeaD [Escherichia coli O103:H2 str.
12009]
gi|293416596|ref|ZP_06659235.1| ATP-dependent RNA helicase DeaD [Escherichia coli B185]
gi|301025993|ref|ZP_07189475.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 196-1]
gi|306816494|ref|ZP_07450626.1| ATP-dependent RNA helicase DeaD [Escherichia coli NC101]
gi|312968499|ref|ZP_07782708.1| cold-shock DEAD box protein A [Escherichia coli 2362-75]
gi|312972567|ref|ZP_07786740.1| cold-shock DEAD box protein A [Escherichia coli 1827-70]
gi|331659451|ref|ZP_08360393.1| ATP-dependent RNA helicase DeaD [Escherichia coli TA206]
gi|331664776|ref|ZP_08365681.1| ATP-dependent RNA helicase DeaD [Escherichia coli TA143]
gi|331669991|ref|ZP_08370836.1| ATP-dependent RNA helicase DeaD [Escherichia coli TA271]
gi|383180342|ref|YP_005458347.1| ATP-dependent RNA helicase DeaD [Shigella sonnei 53G]
gi|386282270|ref|ZP_10059923.1| cold-shock DEAD box protein A [Escherichia sp. 4_1_40B]
gi|386594120|ref|YP_006090520.1| DEAD/DEAH box helicase [Escherichia coli DH1]
gi|386602753|ref|YP_006109053.1| ATP-dependent RNA helicase DeaD [Escherichia coli UM146]
gi|386620777|ref|YP_006140357.1| ATP-dependentRNA helicase A [Escherichia coli NA114]
gi|386640766|ref|YP_006107564.1| cold-shock DeaD box ATP-dependent RNA helicase [Escherichia coli
ABU 83972]
gi|387613854|ref|YP_006116970.1| ATP-dependent RNA helicase (DEAD-box protein) [Escherichia coli
ETEC H10407]
gi|387622826|ref|YP_006130454.1| ATP-dependent RNA helicase DeaD [Escherichia coli DH1]
gi|388479157|ref|YP_491349.1| ATP-dependent RNA helicase [Escherichia coli str. K-12 substr.
W3110]
gi|404376543|ref|ZP_10981701.1| cold-shock DEAD box protein A [Escherichia sp. 1_1_43]
gi|407471138|ref|YP_006782419.1| ATP-dependent RNA helicase DeaD [Escherichia coli O104:H4 str.
2009EL-2071]
gi|407480205|ref|YP_006777354.1| ATP-dependent RNA helicase DeaD [Escherichia coli O104:H4 str.
2011C-3493]
gi|410480766|ref|YP_006768312.1| ATP-dependent RNA helicase DeaD [Escherichia coli O104:H4 str.
2009EL-2050]
gi|414577950|ref|ZP_11435124.1| cold-shock DEAD box protein A [Shigella sonnei 3233-85]
gi|415795641|ref|ZP_11497154.1| cold-shock DEAD box protein A [Escherichia coli E128010]
gi|415811203|ref|ZP_11503553.1| cold-shock DEAD box protein A [Escherichia coli LT-68]
gi|415839228|ref|ZP_11521046.1| cold-shock DEAD box protein A [Escherichia coli RN587/1]
gi|415851001|ref|ZP_11527796.1| cold-shock DEAD box protein A [Shigella sonnei 53G]
gi|415857268|ref|ZP_11532042.1| cold-shock DEAD box protein A [Shigella flexneri 2a str. 2457T]
gi|416281378|ref|ZP_11645774.1| Cold-shock DEAD-box protein A [Shigella boydii ATCC 9905]
gi|416337222|ref|ZP_11673648.1| Cold-shock DEAD-box protein A [Escherichia coli WV_060327]
gi|416899483|ref|ZP_11928965.1| cold-shock DEAD box protein A [Escherichia coli STEC_7v]
gi|417086864|ref|ZP_11953961.1| ATP-dependent RNA helicase DeaD [Escherichia coli cloneA_i1]
gi|417117449|ref|ZP_11968310.1| cold-shock DEAD-box protein A [Escherichia coli 1.2741]
gi|417123685|ref|ZP_11972595.1| cold-shock DEAD-box protein A [Escherichia coli 97.0246]
gi|417162764|ref|ZP_11998094.1| cold-shock DEAD-box protein A [Escherichia coli 99.0741]
gi|417173643|ref|ZP_12003439.1| cold-shock DEAD-box protein A [Escherichia coli 3.2608]
gi|417184286|ref|ZP_12009978.1| cold-shock DEAD-box protein A [Escherichia coli 93.0624]
gi|417220980|ref|ZP_12024420.1| cold-shock DEAD-box protein A [Escherichia coli 96.154]
gi|417228838|ref|ZP_12030596.1| cold-shock DEAD-box protein A [Escherichia coli 5.0959]
gi|417245069|ref|ZP_12038808.1| cold-shock DEAD-box protein A [Escherichia coli 9.0111]
gi|417249359|ref|ZP_12041143.1| cold-shock DEAD-box protein A [Escherichia coli 4.0967]
gi|417264434|ref|ZP_12051828.1| cold-shock DEAD-box protein A [Escherichia coli 2.3916]
gi|417266884|ref|ZP_12054245.1| cold-shock DEAD-box protein A [Escherichia coli 3.3884]
gi|417272981|ref|ZP_12060330.1| cold-shock DEAD-box protein A [Escherichia coli 2.4168]
gi|417276229|ref|ZP_12063560.1| cold-shock DEAD-box protein A [Escherichia coli 3.2303]
gi|417282525|ref|ZP_12069825.1| cold-shock DEAD-box protein A [Escherichia coli 3003]
gi|417285062|ref|ZP_12072353.1| cold-shock DEAD-box protein A [Escherichia coli TW07793]
gi|417290906|ref|ZP_12078187.1| cold-shock DEAD-box protein A [Escherichia coli B41]
gi|417598572|ref|ZP_12249200.1| cold-shock DEAD box protein A [Escherichia coli 3030-1]
gi|417604047|ref|ZP_12254612.1| cold-shock DEAD box protein A [Escherichia coli STEC_94C]
gi|417614768|ref|ZP_12265223.1| cold-shock DEAD box protein A [Escherichia coli STEC_EH250]
gi|417619765|ref|ZP_12270173.1| cold-shock DEAD box protein A [Escherichia coli G58-1]
gi|417625248|ref|ZP_12275541.1| cold-shock DEAD box protein A [Escherichia coli STEC_H.1.8]
gi|417636257|ref|ZP_12286467.1| cold-shock DEAD box protein A [Escherichia coli STEC_S1191]
gi|417641066|ref|ZP_12291201.1| cold-shock DEAD box protein A [Escherichia coli TX1999]
gi|417663747|ref|ZP_12313327.1| cold-shock DEAD-box protein A [Escherichia coli AA86]
gi|417683941|ref|ZP_12333283.1| cold-shock DEAD box protein A [Shigella boydii 3594-74]
gi|417691546|ref|ZP_12340756.1| cold-shock DEAD box protein A [Shigella boydii 5216-82]
gi|417704024|ref|ZP_12353128.1| cold-shock DEAD box protein A [Shigella flexneri K-218]
gi|417714219|ref|ZP_12363177.1| cold-shock DEAD box protein A [Shigella flexneri K-272]
gi|417719066|ref|ZP_12367957.1| cold-shock DEAD box protein A [Shigella flexneri K-227]
gi|417724846|ref|ZP_12373642.1| cold-shock DEAD box protein A [Shigella flexneri K-304]
gi|417730124|ref|ZP_12378815.1| cold-shock DEAD box protein A [Shigella flexneri K-671]
gi|417734959|ref|ZP_12383606.1| cold-shock DEAD box protein A [Shigella flexneri 2747-71]
gi|417740033|ref|ZP_12388605.1| cold-shock DEAD box protein A [Shigella flexneri 4343-70]
gi|417745077|ref|ZP_12393598.1| csdA, DEAD-box RNA helicase [Shigella flexneri 2930-71]
gi|417757521|ref|ZP_12405587.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC2B]
gi|417806811|ref|ZP_12453743.1| ATP-dependent RNA helicase DeaD [Escherichia coli O104:H4 str.
LB226692]
gi|417829641|ref|ZP_12476186.1| csdA, DEAD-box RNA helicase [Shigella flexneri J1713]
gi|417834557|ref|ZP_12480999.1| ATP-dependent RNA helicase DeaD [Escherichia coli O104:H4 str.
01-09591]
gi|417865979|ref|ZP_12511022.1| hypothetical protein C22711_2910 [Escherichia coli O104:H4 str.
C227-11]
gi|417945999|ref|ZP_12589225.1| ATP-dependent RNA helicase DeaD [Escherichia coli XH140A]
gi|417977273|ref|ZP_12618059.1| ATP-dependent RNA helicase DeaD [Escherichia coli XH001]
gi|418258671|ref|ZP_12881867.1| csdA, DEAD-box RNA helicase [Shigella flexneri 6603-63]
gi|418268637|ref|ZP_12887306.1| csdA, DEAD-box RNA helicase [Shigella sonnei str. Moseley]
gi|418304796|ref|ZP_12916590.1| cold-shock DEAD box protein A [Escherichia coli UMNF18]
gi|418956453|ref|ZP_13508378.1| ATP-dependent RNA helicase DeaD [Escherichia coli J53]
gi|418998512|ref|ZP_13546097.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC1A]
gi|419003895|ref|ZP_13551408.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC1B]
gi|419009568|ref|ZP_13556987.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC1C]
gi|419015150|ref|ZP_13562491.1| cold-shock DEAD box protein A [Escherichia coli DEC1D]
gi|419020200|ref|ZP_13567500.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC1E]
gi|419025661|ref|ZP_13572881.1| cold-shock DEAD box protein A [Escherichia coli DEC2A]
gi|419030793|ref|ZP_13577942.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC2C]
gi|419036395|ref|ZP_13583472.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC2D]
gi|419041498|ref|ZP_13588517.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC2E]
gi|419144238|ref|ZP_13688970.1| cold-shock DEAD box protein A [Escherichia coli DEC6A]
gi|419150180|ref|ZP_13694829.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC6B]
gi|419155631|ref|ZP_13700188.1| cold-shock DEAD box protein A [Escherichia coli DEC6C]
gi|419160985|ref|ZP_13705483.1| cold-shock DEAD box protein A [Escherichia coli DEC6D]
gi|419166036|ref|ZP_13710489.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC6E]
gi|419172005|ref|ZP_13715886.1| cold-shock DEAD box protein A [Escherichia coli DEC7A]
gi|419176567|ref|ZP_13720379.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC7B]
gi|419182568|ref|ZP_13726178.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC7C]
gi|419188187|ref|ZP_13731694.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC7D]
gi|419193313|ref|ZP_13736760.1| cold-shock DEAD box protein A [Escherichia coli DEC7E]
gi|419279809|ref|ZP_13822052.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC10E]
gi|419291363|ref|ZP_13833449.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC11A]
gi|419296649|ref|ZP_13838688.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC11B]
gi|419302166|ref|ZP_13844159.1| cold-shock DEAD box protein A [Escherichia coli DEC11C]
gi|419308149|ref|ZP_13850044.1| cold-shock DEAD box protein A [Escherichia coli DEC11D]
gi|419313185|ref|ZP_13855044.1| cold-shock DEAD box protein A [Escherichia coli DEC11E]
gi|419318614|ref|ZP_13860413.1| cold-shock DEAD box protein A [Escherichia coli DEC12A]
gi|419324882|ref|ZP_13866570.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC12B]
gi|419330818|ref|ZP_13872416.1| cold-shock DEAD box protein A [Escherichia coli DEC12C]
gi|419336308|ref|ZP_13877826.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC12D]
gi|419341721|ref|ZP_13883177.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC12E]
gi|419346914|ref|ZP_13888285.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC13A]
gi|419351381|ref|ZP_13892712.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC13B]
gi|419356854|ref|ZP_13898102.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC13C]
gi|419361834|ref|ZP_13903045.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC13D]
gi|419366934|ref|ZP_13908086.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC13E]
gi|419371740|ref|ZP_13912850.1| cold-shock DEAD box protein A [Escherichia coli DEC14A]
gi|419377235|ref|ZP_13918255.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC14B]
gi|419382572|ref|ZP_13923516.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC14C]
gi|419387862|ref|ZP_13928732.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC14D]
gi|419810594|ref|ZP_14335474.1| ATP-dependent RNA helicase DeaD [Escherichia coli O32:H37 str. P4]
gi|419866822|ref|ZP_14389171.1| ATP-dependent RNA helicase DeaD [Escherichia coli O103:H25 str.
CVM9340]
gi|419868275|ref|ZP_14390567.1| ATP-dependent RNA helicase DeaD [Escherichia coli O103:H2 str.
CVM9450]
gi|419913496|ref|ZP_14431927.1| ATP-dependent RNA helicase DeaD [Escherichia coli KD1]
gi|419919650|ref|ZP_14437794.1| ATP-dependent RNA helicase DeaD [Escherichia coli KD2]
gi|419939345|ref|ZP_14456140.1| ATP-dependent RNA helicase DeaD [Escherichia coli 75]
gi|419946180|ref|ZP_14462597.1| ATP-dependent RNA helicase DeaD [Escherichia coli HM605]
gi|420322131|ref|ZP_14823955.1| cold-shock DEAD box protein A [Shigella flexneri 2850-71]
gi|420327323|ref|ZP_14829068.1| cold-shock DEAD box protein A [Shigella flexneri CCH060]
gi|420343565|ref|ZP_14845030.1| cold-shock DEAD box protein A [Shigella flexneri K-404]
gi|420354717|ref|ZP_14855798.1| cold-shock DEAD box protein A [Shigella boydii 4444-74]
gi|420360517|ref|ZP_14861472.1| cold-shock DEAD box protein A [Shigella sonnei 3226-85]
gi|420365157|ref|ZP_14866026.1| csdA, DEAD-box RNA helicase [Shigella sonnei 4822-66]
gi|420382262|ref|ZP_14881700.1| cold-shock DEAD box protein A [Shigella dysenteriae 225-75]
gi|420387417|ref|ZP_14886758.1| cold-shock DEAD box protein A [Escherichia coli EPECa12]
gi|420393281|ref|ZP_14892527.1| csdA, DEAD-box RNA helicase [Escherichia coli EPEC C342-62]
gi|421684325|ref|ZP_16124113.1| csdA, DEAD-box RNA helicase [Shigella flexneri 1485-80]
gi|421774868|ref|ZP_16211479.1| ATP-dependent RNA helicase DeaD [Escherichia coli AD30]
gi|422749735|ref|ZP_16803646.1| DEAD/DEAH box helicase [Escherichia coli H252]
gi|422753894|ref|ZP_16807720.1| DEAD/DEAH box helicase [Escherichia coli H263]
gi|422760633|ref|ZP_16814393.1| DEAD/DEAH box helicase [Escherichia coli E1167]
gi|422767341|ref|ZP_16821067.1| DEAD/DEAH box helicase [Escherichia coli E1520]
gi|422770959|ref|ZP_16824649.1| DEAD/DEAH box helicase [Escherichia coli E482]
gi|422779875|ref|ZP_16832660.1| DEAD/DEAH box helicase [Escherichia coli TW10509]
gi|422787304|ref|ZP_16840042.1| DEAD/DEAH box helicase [Escherichia coli H489]
gi|422793209|ref|ZP_16845906.1| DEAD/DEAH box helicase [Escherichia coli TA007]
gi|422801110|ref|ZP_16849607.1| DEAD/DEAH box helicase [Escherichia coli M863]
gi|422803972|ref|ZP_16852404.1| DEAD/DEAH box helicase [Escherichia fergusonii B253]
gi|422818331|ref|ZP_16866544.1| cold-shock DEAD box protein A [Escherichia coli M919]
gi|422827432|ref|ZP_16875606.1| cold-shock DEAD box protein A [Escherichia coli B093]
gi|422841180|ref|ZP_16889150.1| cold-shock DEAD box protein A [Escherichia coli H397]
gi|422959937|ref|ZP_16971572.1| cold-shock DEAD box protein A [Escherichia coli H494]
gi|422969673|ref|ZP_16973466.1| cold-shock DEAD box protein A [Escherichia coli TA124]
gi|422989367|ref|ZP_16980139.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
C227-11]
gi|422996262|ref|ZP_16987025.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
C236-11]
gi|423001411|ref|ZP_16992164.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
09-7901]
gi|423005071|ref|ZP_16995816.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
04-8351]
gi|423011576|ref|ZP_17002309.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
11-3677]
gi|423020804|ref|ZP_17011511.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
11-4404]
gi|423025969|ref|ZP_17016664.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
11-4522]
gi|423031788|ref|ZP_17022474.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
11-4623]
gi|423034660|ref|ZP_17025338.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
11-4632 C1]
gi|423039788|ref|ZP_17030457.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
11-4632 C2]
gi|423046472|ref|ZP_17037131.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
11-4632 C3]
gi|423055009|ref|ZP_17043815.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
11-4632 C4]
gi|423057001|ref|ZP_17045800.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
11-4632 C5]
gi|423702666|ref|ZP_17677098.1| cold-shock DEAD box protein A [Escherichia coli H730]
gi|424817725|ref|ZP_18242876.1| ATP-dependent RNA helicase [Escherichia fergusonii ECD227]
gi|425116710|ref|ZP_18518500.1| cold-shock DEAD-box protein A [Escherichia coli 8.0566]
gi|425121463|ref|ZP_18523149.1| cold-shock DEAD box protein A [Escherichia coli 8.0569]
gi|425274358|ref|ZP_18665756.1| cold-shock DEAD-box protein A [Escherichia coli TW15901]
gi|425279563|ref|ZP_18670791.1| cold-shock DEAD-box protein A [Escherichia coli ARS4.2123]
gi|425284938|ref|ZP_18675968.1| cold-shock DEAD-box protein A [Escherichia coli TW00353]
gi|425290302|ref|ZP_18681128.1| cold-shock DEAD-box protein A [Escherichia coli 3006]
gi|425302033|ref|ZP_18691917.1| cold-shock DEAD-box protein A [Escherichia coli 07798]
gi|425306954|ref|ZP_18696634.1| cold-shock DEAD-box protein A [Escherichia coli N1]
gi|425424038|ref|ZP_18805196.1| cold-shock DEAD-box protein A [Escherichia coli 0.1288]
gi|429720832|ref|ZP_19255754.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429772730|ref|ZP_19304748.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
11-02030]
gi|429778096|ref|ZP_19310064.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
11-02033-1]
gi|429786402|ref|ZP_19318295.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
11-02092]
gi|429787346|ref|ZP_19319236.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
11-02093]
gi|429793142|ref|ZP_19324988.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
11-02281]
gi|429799721|ref|ZP_19331515.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
11-02318]
gi|429803337|ref|ZP_19335095.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
11-02913]
gi|429807978|ref|ZP_19339698.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
11-03439]
gi|429813677|ref|ZP_19345354.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
11-04080]
gi|429818888|ref|ZP_19350520.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
11-03943]
gi|429905236|ref|ZP_19371213.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429909372|ref|ZP_19375335.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
Ec11-9941]
gi|429915244|ref|ZP_19381190.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429920290|ref|ZP_19386218.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429926094|ref|ZP_19392006.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429930029|ref|ZP_19395930.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429936568|ref|ZP_19402453.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429942249|ref|ZP_19408122.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429944932|ref|ZP_19410793.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429952488|ref|ZP_19418333.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429955843|ref|ZP_19421673.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
Ec12-0466]
gi|432359618|ref|ZP_19602832.1| cold-shock DEAD box protein A [Escherichia coli KTE4]
gi|432364415|ref|ZP_19607572.1| cold-shock DEAD box protein A [Escherichia coli KTE5]
gi|432366621|ref|ZP_19609739.1| cold-shock DEAD box protein A [Escherichia coli KTE10]
gi|432378352|ref|ZP_19621336.1| cold-shock DEAD box protein A [Escherichia coli KTE12]
gi|432382894|ref|ZP_19625833.1| cold-shock DEAD box protein A [Escherichia coli KTE15]
gi|432388925|ref|ZP_19631805.1| cold-shock DEAD box protein A [Escherichia coli KTE16]
gi|432393755|ref|ZP_19636579.1| cold-shock DEAD box protein A [Escherichia coli KTE21]
gi|432399118|ref|ZP_19641893.1| cold-shock DEAD box protein A [Escherichia coli KTE25]
gi|432408243|ref|ZP_19650947.1| cold-shock DEAD box protein A [Escherichia coli KTE28]
gi|432413393|ref|ZP_19656048.1| cold-shock DEAD box protein A [Escherichia coli KTE39]
gi|432418689|ref|ZP_19661284.1| cold-shock DEAD box protein A [Escherichia coli KTE44]
gi|432423578|ref|ZP_19666117.1| cold-shock DEAD box protein A [Escherichia coli KTE178]
gi|432433384|ref|ZP_19675809.1| cold-shock DEAD box protein A [Escherichia coli KTE187]
gi|432437979|ref|ZP_19680363.1| cold-shock DEAD box protein A [Escherichia coli KTE188]
gi|432442655|ref|ZP_19684991.1| cold-shock DEAD box protein A [Escherichia coli KTE189]
gi|432447775|ref|ZP_19690072.1| cold-shock DEAD box protein A [Escherichia coli KTE191]
gi|432458292|ref|ZP_19700469.1| cold-shock DEAD box protein A [Escherichia coli KTE201]
gi|432472516|ref|ZP_19714554.1| cold-shock DEAD box protein A [Escherichia coli KTE206]
gi|432482498|ref|ZP_19724449.1| cold-shock DEAD box protein A [Escherichia coli KTE210]
gi|432486932|ref|ZP_19728842.1| cold-shock DEAD box protein A [Escherichia coli KTE212]
gi|432497285|ref|ZP_19739078.1| cold-shock DEAD box protein A [Escherichia coli KTE214]
gi|432501727|ref|ZP_19743479.1| cold-shock DEAD box protein A [Escherichia coli KTE216]
gi|432506042|ref|ZP_19747762.1| cold-shock DEAD box protein A [Escherichia coli KTE220]
gi|432515561|ref|ZP_19752777.1| cold-shock DEAD box protein A [Escherichia coli KTE224]
gi|432525497|ref|ZP_19762616.1| cold-shock DEAD box protein A [Escherichia coli KTE230]
gi|432528006|ref|ZP_19765083.1| cold-shock DEAD box protein A [Escherichia coli KTE233]
gi|432535508|ref|ZP_19772472.1| cold-shock DEAD box protein A [Escherichia coli KTE234]
gi|432544908|ref|ZP_19781743.1| cold-shock DEAD box protein A [Escherichia coli KTE236]
gi|432550390|ref|ZP_19787150.1| cold-shock DEAD box protein A [Escherichia coli KTE237]
gi|432555234|ref|ZP_19791953.1| cold-shock DEAD box protein A [Escherichia coli KTE47]
gi|432560440|ref|ZP_19797096.1| cold-shock DEAD box protein A [Escherichia coli KTE49]
gi|432565529|ref|ZP_19802093.1| cold-shock DEAD box protein A [Escherichia coli KTE51]
gi|432570394|ref|ZP_19806901.1| cold-shock DEAD box protein A [Escherichia coli KTE53]
gi|432577399|ref|ZP_19813849.1| cold-shock DEAD box protein A [Escherichia coli KTE56]
gi|432581637|ref|ZP_19818051.1| cold-shock DEAD box protein A [Escherichia coli KTE57]
gi|432589549|ref|ZP_19825902.1| cold-shock DEAD box protein A [Escherichia coli KTE58]
gi|432594365|ref|ZP_19830678.1| cold-shock DEAD box protein A [Escherichia coli KTE60]
gi|432599417|ref|ZP_19835688.1| cold-shock DEAD box protein A [Escherichia coli KTE62]
gi|432609205|ref|ZP_19845387.1| cold-shock DEAD box protein A [Escherichia coli KTE67]
gi|432613175|ref|ZP_19849333.1| cold-shock DEAD box protein A [Escherichia coli KTE72]
gi|432623530|ref|ZP_19859549.1| cold-shock DEAD box protein A [Escherichia coli KTE76]
gi|432628799|ref|ZP_19864769.1| cold-shock DEAD box protein A [Escherichia coli KTE77]
gi|432638372|ref|ZP_19874238.1| cold-shock DEAD box protein A [Escherichia coli KTE81]
gi|432647843|ref|ZP_19883629.1| cold-shock DEAD box protein A [Escherichia coli KTE86]
gi|432652763|ref|ZP_19888509.1| cold-shock DEAD box protein A [Escherichia coli KTE87]
gi|432657406|ref|ZP_19893103.1| cold-shock DEAD box protein A [Escherichia coli KTE93]
gi|432662376|ref|ZP_19898012.1| cold-shock DEAD box protein A [Escherichia coli KTE111]
gi|432672261|ref|ZP_19907785.1| cold-shock DEAD box protein A [Escherichia coli KTE119]
gi|432676290|ref|ZP_19911740.1| cold-shock DEAD box protein A [Escherichia coli KTE142]
gi|432686985|ref|ZP_19922276.1| cold-shock DEAD box protein A [Escherichia coli KTE156]
gi|432688440|ref|ZP_19923712.1| cold-shock DEAD box protein A [Escherichia coli KTE161]
gi|432696037|ref|ZP_19931230.1| cold-shock DEAD box protein A [Escherichia coli KTE162]
gi|432700687|ref|ZP_19935832.1| cold-shock DEAD box protein A [Escherichia coli KTE169]
gi|432705905|ref|ZP_19941001.1| cold-shock DEAD box protein A [Escherichia coli KTE171]
gi|432707514|ref|ZP_19942591.1| cold-shock DEAD box protein A [Escherichia coli KTE6]
gi|432715016|ref|ZP_19950044.1| cold-shock DEAD box protein A [Escherichia coli KTE8]
gi|432724636|ref|ZP_19959550.1| cold-shock DEAD box protein A [Escherichia coli KTE17]
gi|432729219|ref|ZP_19964094.1| cold-shock DEAD box protein A [Escherichia coli KTE18]
gi|432733922|ref|ZP_19968747.1| cold-shock DEAD box protein A [Escherichia coli KTE45]
gi|432738650|ref|ZP_19973402.1| cold-shock DEAD box protein A [Escherichia coli KTE42]
gi|432742906|ref|ZP_19977621.1| cold-shock DEAD box protein A [Escherichia coli KTE23]
gi|432747149|ref|ZP_19981811.1| cold-shock DEAD box protein A [Escherichia coli KTE43]
gi|432756099|ref|ZP_19990644.1| cold-shock DEAD box protein A [Escherichia coli KTE22]
gi|432761008|ref|ZP_19995498.1| cold-shock DEAD box protein A [Escherichia coli KTE46]
gi|432766569|ref|ZP_20000985.1| cold-shock DEAD box protein A [Escherichia coli KTE48]
gi|432776247|ref|ZP_20010510.1| cold-shock DEAD box protein A [Escherichia coli KTE54]
gi|432780179|ref|ZP_20014400.1| cold-shock DEAD box protein A [Escherichia coli KTE59]
gi|432785137|ref|ZP_20019315.1| cold-shock DEAD box protein A [Escherichia coli KTE63]
gi|432789172|ref|ZP_20023300.1| cold-shock DEAD box protein A [Escherichia coli KTE65]
gi|432794389|ref|ZP_20028471.1| cold-shock DEAD box protein A [Escherichia coli KTE78]
gi|432795906|ref|ZP_20029947.1| cold-shock DEAD box protein A [Escherichia coli KTE79]
gi|432803348|ref|ZP_20037302.1| cold-shock DEAD box protein A [Escherichia coli KTE84]
gi|432807426|ref|ZP_20041341.1| cold-shock DEAD box protein A [Escherichia coli KTE91]
gi|432816938|ref|ZP_20050699.1| cold-shock DEAD box protein A [Escherichia coli KTE115]
gi|432822607|ref|ZP_20056296.1| cold-shock DEAD box protein A [Escherichia coli KTE118]
gi|432824062|ref|ZP_20057732.1| cold-shock DEAD box protein A [Escherichia coli KTE123]
gi|432846213|ref|ZP_20078894.1| cold-shock DEAD box protein A [Escherichia coli KTE141]
gi|432870627|ref|ZP_20091084.1| cold-shock DEAD box protein A [Escherichia coli KTE147]
gi|432877158|ref|ZP_20094956.1| cold-shock DEAD box protein A [Escherichia coli KTE154]
gi|432890541|ref|ZP_20103473.1| cold-shock DEAD box protein A [Escherichia coli KTE165]
gi|432900394|ref|ZP_20110816.1| cold-shock DEAD box protein A [Escherichia coli KTE192]
gi|432906813|ref|ZP_20115352.1| cold-shock DEAD box protein A [Escherichia coli KTE194]
gi|432922185|ref|ZP_20125149.1| cold-shock DEAD box protein A [Escherichia coli KTE173]
gi|432928984|ref|ZP_20130085.1| cold-shock DEAD box protein A [Escherichia coli KTE175]
gi|432936352|ref|ZP_20135486.1| cold-shock DEAD box protein A [Escherichia coli KTE184]
gi|432939792|ref|ZP_20137895.1| cold-shock DEAD box protein A [Escherichia coli KTE183]
gi|432956923|ref|ZP_20148526.1| cold-shock DEAD box protein A [Escherichia coli KTE197]
gi|432973444|ref|ZP_20162290.1| cold-shock DEAD box protein A [Escherichia coli KTE207]
gi|432975372|ref|ZP_20164207.1| cold-shock DEAD box protein A [Escherichia coli KTE209]
gi|432982616|ref|ZP_20171387.1| cold-shock DEAD box protein A [Escherichia coli KTE211]
gi|432987018|ref|ZP_20175731.1| cold-shock DEAD box protein A [Escherichia coli KTE215]
gi|432992270|ref|ZP_20180929.1| cold-shock DEAD box protein A [Escherichia coli KTE217]
gi|432996932|ref|ZP_20185515.1| cold-shock DEAD box protein A [Escherichia coli KTE218]
gi|433001528|ref|ZP_20190047.1| cold-shock DEAD box protein A [Escherichia coli KTE223]
gi|433006751|ref|ZP_20195175.1| cold-shock DEAD box protein A [Escherichia coli KTE227]
gi|433009366|ref|ZP_20197779.1| cold-shock DEAD box protein A [Escherichia coli KTE229]
gi|433015470|ref|ZP_20203805.1| cold-shock DEAD box protein A [Escherichia coli KTE104]
gi|433025035|ref|ZP_20213009.1| cold-shock DEAD box protein A [Escherichia coli KTE106]
gi|433030081|ref|ZP_20217933.1| cold-shock DEAD box protein A [Escherichia coli KTE109]
gi|433040168|ref|ZP_20227761.1| cold-shock DEAD box protein A [Escherichia coli KTE113]
gi|433049600|ref|ZP_20236938.1| cold-shock DEAD box protein A [Escherichia coli KTE120]
gi|433059652|ref|ZP_20246689.1| cold-shock DEAD box protein A [Escherichia coli KTE124]
gi|433079355|ref|ZP_20265875.1| cold-shock DEAD box protein A [Escherichia coli KTE131]
gi|433084096|ref|ZP_20270544.1| cold-shock DEAD box protein A [Escherichia coli KTE133]
gi|433088821|ref|ZP_20275187.1| cold-shock DEAD box protein A [Escherichia coli KTE137]
gi|433097972|ref|ZP_20284148.1| cold-shock DEAD box protein A [Escherichia coli KTE139]
gi|433102756|ref|ZP_20288829.1| cold-shock DEAD box protein A [Escherichia coli KTE145]
gi|433107420|ref|ZP_20293385.1| cold-shock DEAD box protein A [Escherichia coli KTE148]
gi|433112402|ref|ZP_20298258.1| cold-shock DEAD box protein A [Escherichia coli KTE150]
gi|433117047|ref|ZP_20302833.1| cold-shock DEAD box protein A [Escherichia coli KTE153]
gi|433121734|ref|ZP_20307395.1| cold-shock DEAD box protein A [Escherichia coli KTE157]
gi|433126735|ref|ZP_20312282.1| cold-shock DEAD box protein A [Escherichia coli KTE160]
gi|433136409|ref|ZP_20321744.1| cold-shock DEAD box protein A [Escherichia coli KTE166]
gi|433140799|ref|ZP_20326045.1| cold-shock DEAD box protein A [Escherichia coli KTE167]
gi|433145774|ref|ZP_20330908.1| cold-shock DEAD box protein A [Escherichia coli KTE168]
gi|433150804|ref|ZP_20335805.1| cold-shock DEAD box protein A [Escherichia coli KTE174]
gi|433155316|ref|ZP_20340249.1| cold-shock DEAD box protein A [Escherichia coli KTE176]
gi|433165157|ref|ZP_20349888.1| cold-shock DEAD box protein A [Escherichia coli KTE179]
gi|433170133|ref|ZP_20354756.1| cold-shock DEAD box protein A [Escherichia coli KTE180]
gi|433175056|ref|ZP_20359570.1| cold-shock DEAD box protein A [Escherichia coli KTE232]
gi|433189975|ref|ZP_20374064.1| cold-shock DEAD box protein A [Escherichia coli KTE88]
gi|433195210|ref|ZP_20379189.1| cold-shock DEAD box protein A [Escherichia coli KTE90]
gi|433199914|ref|ZP_20383802.1| cold-shock DEAD box protein A [Escherichia coli KTE94]
gi|433209294|ref|ZP_20392962.1| cold-shock DEAD box protein A [Escherichia coli KTE97]
gi|433214144|ref|ZP_20397727.1| cold-shock DEAD box protein A [Escherichia coli KTE99]
gi|433325697|ref|ZP_20402756.1| ATP-dependent RNA helicase DeaD [Escherichia coli J96]
gi|442592994|ref|ZP_21010950.1| Cold-shock DEAD-box protein A [Escherichia coli O10:K5(L):H4 str.
ATCC 23506]
gi|442597231|ref|ZP_21015027.1| Cold-shock DEAD-box protein A [Escherichia coli O5:K4(L):H4 str.
ATCC 23502]
gi|442605368|ref|ZP_21020200.1| Cold-shock DEAD-box protein A [Escherichia coli Nissle 1917]
gi|443619236|ref|YP_007383092.1| ATP-dependent RNA helicase DeaD [Escherichia coli APEC O78]
gi|450222729|ref|ZP_21896884.1| ATP-dependent RNA helicase DeaD [Escherichia coli O08]
gi|450250448|ref|ZP_21901638.1| ATP-dependent RNA helicase DeaD [Escherichia coli S17]
gi|71154182|sp|P0A9P7.2|DEAD_ECOL6 RecName: Full=Cold-shock DEAD box protein A; AltName:
Full=ATP-dependent RNA helicase DeaD
gi|71154193|sp|P0A9P6.2|DEAD_ECOLI RecName: Full=Cold-shock DEAD box protein A; AltName:
Full=ATP-dependent RNA helicase DeaD; AltName:
Full=Translation factor W2
gi|71154222|sp|P0A9P8.2|DEAD_SHIFL RecName: Full=Cold-shock DEAD box protein A; AltName:
Full=ATP-dependent RNA helicase DeaD
gi|85675958|dbj|BAE77208.1| ATP-dependent RNA helicase [Escherichia coli str. K12 substr.
W3110]
gi|87082221|gb|AAC76196.2| ATP-dependent RNA helicase [Escherichia coli str. K-12 substr.
MG1655]
gi|110344995|gb|ABG71232.1| probable ATP-dependent RNA helicase DeaD [Escherichia coli 536]
gi|169753514|gb|ACA76213.1| DEAD/DEAH box helicase domain protein [Escherichia coli ATCC 8739]
gi|169890534|gb|ACB04241.1| ATP-dependent RNA helicase [Escherichia coli str. K-12 substr.
DH10B]
gi|170522032|gb|ACB20210.1| cold-shock DEAD box protein A [Escherichia coli SMS-3-5]
gi|190907504|gb|EDV67100.1| cold-shock DEAD box protein A [Escherichia coli F11]
gi|192932433|gb|EDV85031.1| cold-shock DEAD box protein A [Escherichia coli E22]
gi|194414216|gb|EDX30491.1| cold-shock DEAD box protein A [Escherichia coli B171]
gi|194422230|gb|EDX38231.1| cold-shock DEAD box protein A [Escherichia coli 101-1]
gi|215266552|emb|CAS10991.1| ATP-dependent RNA helicase [Escherichia coli O127:H6 str. E2348/69]
gi|218353601|emb|CAU99787.1| ATP-dependent RNA helicase [Escherichia coli 55989]
gi|218357988|emb|CAQ90634.1| ATP-dependent RNA helicase [Escherichia fergusonii ATCC 35469]
gi|218367003|emb|CAR04774.1| ATP-dependent RNA helicase [Escherichia coli S88]
gi|218429018|emb|CAR09825.1| ATP-dependent RNA helicase [Escherichia coli ED1a]
gi|238860045|gb|ACR62043.1| ATP-dependent RNA helicase [Escherichia coli BW2952]
gi|242378707|emb|CAQ33497.1| DeaD, DEAD-box RNA helicase [Escherichia coli BL21(DE3)]
gi|253323046|gb|ACT27648.1| DEAD/DEAH box helicase domain protein [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253975007|gb|ACT40678.1| ATP-dependent RNA helicase [Escherichia coli B str. REL606]
gi|253979163|gb|ACT44833.1| ATP-dependent RNA helicase [Escherichia coli BL21(DE3)]
gi|257761124|dbj|BAI32621.1| ATP-dependent RNA helicase DeaD [Escherichia coli O103:H2 str.
12009]
gi|260447809|gb|ACX38231.1| DEAD/DEAH box helicase domain protein [Escherichia coli DH1]
gi|291431952|gb|EFF04935.1| ATP-dependent RNA helicase DeaD [Escherichia coli B185]
gi|299879888|gb|EFI88099.1| ATP-dependent RNA helicase DeaD [Escherichia coli MS 196-1]
gi|305850059|gb|EFM50518.1| ATP-dependent RNA helicase DeaD [Escherichia coli NC101]
gi|307555258|gb|ADN48033.1| cold-shock DeaD box ATP-dependent RNA helicase [Escherichia coli
ABU 83972]
gi|307625237|gb|ADN69541.1| ATP-dependent RNA helicase DeaD [Escherichia coli UM146]
gi|309703590|emb|CBJ02930.1| ATP-dependent RNA helicase (DEAD-box protein) [Escherichia coli
ETEC H10407]
gi|310332509|gb|EFP99722.1| cold-shock DEAD box protein A [Escherichia coli 1827-70]
gi|312286717|gb|EFR14628.1| cold-shock DEAD box protein A [Escherichia coli 2362-75]
gi|313648596|gb|EFS13038.1| cold-shock DEAD box protein A [Shigella flexneri 2a str. 2457T]
gi|315137750|dbj|BAJ44909.1| ATP-dependent RNA helicase DeaD [Escherichia coli DH1]
gi|320181438|gb|EFW56356.1| Cold-shock DEAD-box protein A [Shigella boydii ATCC 9905]
gi|320194648|gb|EFW69278.1| Cold-shock DEAD-box protein A [Escherichia coli WV_060327]
gi|323162856|gb|EFZ48691.1| cold-shock DEAD box protein A [Escherichia coli E128010]
gi|323165120|gb|EFZ50910.1| cold-shock DEAD box protein A [Shigella sonnei 53G]
gi|323173578|gb|EFZ59207.1| cold-shock DEAD box protein A [Escherichia coli LT-68]
gi|323189215|gb|EFZ74499.1| cold-shock DEAD box protein A [Escherichia coli RN587/1]
gi|323936142|gb|EGB32436.1| DEAD/DEAH box helicase [Escherichia coli E1520]
gi|323941736|gb|EGB37915.1| DEAD/DEAH box helicase [Escherichia coli E482]
gi|323951318|gb|EGB47193.1| DEAD/DEAH box helicase [Escherichia coli H252]
gi|323957689|gb|EGB53403.1| DEAD/DEAH box helicase [Escherichia coli H263]
gi|323961066|gb|EGB56681.1| DEAD/DEAH box helicase [Escherichia coli H489]
gi|323966344|gb|EGB61778.1| DEAD/DEAH box helicase [Escherichia coli M863]
gi|323970273|gb|EGB65544.1| DEAD/DEAH box helicase [Escherichia coli TA007]
gi|323979119|gb|EGB74197.1| DEAD/DEAH box helicase [Escherichia coli TW10509]
gi|324115232|gb|EGC09196.1| DEAD/DEAH box helicase [Escherichia fergusonii B253]
gi|324119529|gb|EGC13411.1| DEAD/DEAH box helicase [Escherichia coli E1167]
gi|325498745|gb|EGC96604.1| ATP-dependent RNA helicase [Escherichia fergusonii ECD227]
gi|327251943|gb|EGE63629.1| cold-shock DEAD box protein A [Escherichia coli STEC_7v]
gi|330909220|gb|EGH37734.1| cold-shock DEAD-box protein A [Escherichia coli AA86]
gi|331054033|gb|EGI26062.1| ATP-dependent RNA helicase DeaD [Escherichia coli TA206]
gi|331058024|gb|EGI30006.1| ATP-dependent RNA helicase DeaD [Escherichia coli TA143]
gi|331062904|gb|EGI34818.1| ATP-dependent RNA helicase DeaD [Escherichia coli TA271]
gi|332086106|gb|EGI91268.1| cold-shock DEAD box protein A [Shigella boydii 5216-82]
gi|332090717|gb|EGI95811.1| cold-shock DEAD box protein A [Shigella boydii 3594-74]
gi|332752322|gb|EGJ82712.1| cold-shock DEAD box protein A [Shigella flexneri 4343-70]
gi|332752849|gb|EGJ83234.1| cold-shock DEAD box protein A [Shigella flexneri K-671]
gi|332754390|gb|EGJ84756.1| cold-shock DEAD box protein A [Shigella flexneri 2747-71]
gi|332765159|gb|EGJ95386.1| csdA, DEAD-box RNA helicase [Shigella flexneri 2930-71]
gi|332999241|gb|EGK18827.1| cold-shock DEAD box protein A [Shigella flexneri K-272]
gi|333000407|gb|EGK19990.1| cold-shock DEAD box protein A [Shigella flexneri K-218]
gi|333014540|gb|EGK33887.1| cold-shock DEAD box protein A [Shigella flexneri K-304]
gi|333014963|gb|EGK34307.1| cold-shock DEAD box protein A [Shigella flexneri K-227]
gi|333971278|gb|AEG38083.1| ATP-dependentRNA helicase A [Escherichia coli NA114]
gi|335574038|gb|EGM60376.1| csdA, DEAD-box RNA helicase [Shigella flexneri J1713]
gi|339416894|gb|AEJ58566.1| cold-shock DEAD box protein A [Escherichia coli UMNF18]
gi|340732701|gb|EGR61837.1| ATP-dependent RNA helicase DeaD [Escherichia coli O104:H4 str.
01-09591]
gi|340738268|gb|EGR72517.1| ATP-dependent RNA helicase DeaD [Escherichia coli O104:H4 str.
LB226692]
gi|341919268|gb|EGT68880.1| hypothetical protein C22711_2910 [Escherichia coli O104:H4 str.
C227-11]
gi|342362316|gb|EGU26437.1| ATP-dependent RNA helicase DeaD [Escherichia coli XH140A]
gi|344193084|gb|EGV47168.1| ATP-dependent RNA helicase DeaD [Escherichia coli XH001]
gi|345348073|gb|EGW80371.1| cold-shock DEAD box protein A [Escherichia coli STEC_94C]
gi|345349730|gb|EGW82007.1| cold-shock DEAD box protein A [Escherichia coli 3030-1]
gi|345360614|gb|EGW92783.1| cold-shock DEAD box protein A [Escherichia coli STEC_EH250]
gi|345372895|gb|EGX04858.1| cold-shock DEAD box protein A [Escherichia coli G58-1]
gi|345374451|gb|EGX06403.1| cold-shock DEAD box protein A [Escherichia coli STEC_H.1.8]
gi|345385975|gb|EGX15812.1| cold-shock DEAD box protein A [Escherichia coli STEC_S1191]
gi|345392230|gb|EGX22015.1| cold-shock DEAD box protein A [Escherichia coli TX1999]
gi|354860527|gb|EHF20973.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
C236-11]
gi|354863845|gb|EHF24276.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
C227-11]
gi|354865759|gb|EHF26187.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
04-8351]
gi|354872183|gb|EHF32578.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
09-7901]
gi|354878526|gb|EHF38875.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
11-3677]
gi|354887069|gb|EHF47346.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
11-4404]
gi|354890959|gb|EHF51195.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
11-4522]
gi|354895374|gb|EHF55561.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
11-4623]
gi|354906858|gb|EHF66929.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
11-4632 C1]
gi|354909881|gb|EHF69911.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
11-4632 C2]
gi|354911966|gb|EHF71968.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
11-4632 C3]
gi|354914715|gb|EHF74697.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
11-4632 C4]
gi|354922063|gb|EHF81981.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
11-4632 C5]
gi|355350330|gb|EHF99530.1| ATP-dependent RNA helicase DeaD [Escherichia coli cloneA_i1]
gi|359333361|dbj|BAL39808.1| ATP-dependent RNA helicase [Escherichia coli str. K-12 substr.
MDS42]
gi|371594315|gb|EHN83183.1| cold-shock DEAD box protein A [Escherichia coli H494]
gi|371601146|gb|EHN89914.1| cold-shock DEAD box protein A [Escherichia coli TA124]
gi|371604920|gb|EHN93544.1| cold-shock DEAD box protein A [Escherichia coli H397]
gi|371613107|gb|EHO01608.1| cold-shock DEAD box protein A [Escherichia coli B093]
gi|377840775|gb|EHU05845.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC1A]
gi|377841401|gb|EHU06467.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC1C]
gi|377844568|gb|EHU09604.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC1B]
gi|377854683|gb|EHU19560.1| cold-shock DEAD box protein A [Escherichia coli DEC1D]
gi|377857883|gb|EHU22731.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC1E]
gi|377861349|gb|EHU26169.1| cold-shock DEAD box protein A [Escherichia coli DEC2A]
gi|377871816|gb|EHU36474.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC2B]
gi|377874553|gb|EHU39180.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC2C]
gi|377876841|gb|EHU41440.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC2D]
gi|377887124|gb|EHU51602.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC2E]
gi|377990438|gb|EHV53599.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC6B]
gi|377991769|gb|EHV54919.1| cold-shock DEAD box protein A [Escherichia coli DEC6A]
gi|377994593|gb|EHV57719.1| cold-shock DEAD box protein A [Escherichia coli DEC6C]
gi|378005238|gb|EHV68243.1| cold-shock DEAD box protein A [Escherichia coli DEC6D]
gi|378007934|gb|EHV70897.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC6E]
gi|378013792|gb|EHV76709.1| cold-shock DEAD box protein A [Escherichia coli DEC7A]
gi|378021855|gb|EHV84550.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC7C]
gi|378025936|gb|EHV88576.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC7D]
gi|378030728|gb|EHV93321.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC7B]
gi|378036228|gb|EHV98772.1| cold-shock DEAD box protein A [Escherichia coli DEC7E]
gi|378125792|gb|EHW87190.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC10E]
gi|378127022|gb|EHW88414.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC11A]
gi|378139357|gb|EHX00597.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC11B]
gi|378145909|gb|EHX07064.1| cold-shock DEAD box protein A [Escherichia coli DEC11D]
gi|378147870|gb|EHX09015.1| cold-shock DEAD box protein A [Escherichia coli DEC11C]
gi|378156211|gb|EHX17263.1| cold-shock DEAD box protein A [Escherichia coli DEC11E]
gi|378162557|gb|EHX23517.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC12B]
gi|378166558|gb|EHX27480.1| cold-shock DEAD box protein A [Escherichia coli DEC12A]
gi|378167592|gb|EHX28504.1| cold-shock DEAD box protein A [Escherichia coli DEC12C]
gi|378180040|gb|EHX40742.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC12D]
gi|378184155|gb|EHX44792.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC12E]
gi|378184861|gb|EHX45497.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC13A]
gi|378197195|gb|EHX57678.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC13C]
gi|378197753|gb|EHX58229.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC13B]
gi|378200713|gb|EHX61167.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC13D]
gi|378210468|gb|EHX70822.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC13E]
gi|378214450|gb|EHX74757.1| cold-shock DEAD box protein A [Escherichia coli DEC14A]
gi|378216744|gb|EHX77028.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC14B]
gi|378226134|gb|EHX86327.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC14C]
gi|378229376|gb|EHX89517.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC14D]
gi|384380247|gb|EIE38113.1| ATP-dependent RNA helicase DeaD [Escherichia coli J53]
gi|385156578|gb|EIF18574.1| ATP-dependent RNA helicase DeaD [Escherichia coli O32:H37 str. P4]
gi|385538116|gb|EIF84981.1| cold-shock DEAD box protein A [Escherichia coli M919]
gi|385710158|gb|EIG47150.1| cold-shock DEAD box protein A [Escherichia coli H730]
gi|386120646|gb|EIG69270.1| cold-shock DEAD box protein A [Escherichia sp. 4_1_40B]
gi|386139993|gb|EIG81148.1| cold-shock DEAD-box protein A [Escherichia coli 1.2741]
gi|386147076|gb|EIG93521.1| cold-shock DEAD-box protein A [Escherichia coli 97.0246]
gi|386173255|gb|EIH45267.1| cold-shock DEAD-box protein A [Escherichia coli 99.0741]
gi|386176335|gb|EIH53814.1| cold-shock DEAD-box protein A [Escherichia coli 3.2608]
gi|386183848|gb|EIH66595.1| cold-shock DEAD-box protein A [Escherichia coli 93.0624]
gi|386200782|gb|EIH99772.1| cold-shock DEAD-box protein A [Escherichia coli 96.154]
gi|386208173|gb|EII12678.1| cold-shock DEAD-box protein A [Escherichia coli 5.0959]
gi|386210390|gb|EII20864.1| cold-shock DEAD-box protein A [Escherichia coli 9.0111]
gi|386219680|gb|EII36144.1| cold-shock DEAD-box protein A [Escherichia coli 4.0967]
gi|386222143|gb|EII44572.1| cold-shock DEAD-box protein A [Escherichia coli 2.3916]
gi|386229242|gb|EII56597.1| cold-shock DEAD-box protein A [Escherichia coli 3.3884]
gi|386236681|gb|EII68657.1| cold-shock DEAD-box protein A [Escherichia coli 2.4168]
gi|386240954|gb|EII77873.1| cold-shock DEAD-box protein A [Escherichia coli 3.2303]
gi|386246854|gb|EII88584.1| cold-shock DEAD-box protein A [Escherichia coli 3003]
gi|386250303|gb|EII96470.1| cold-shock DEAD-box protein A [Escherichia coli TW07793]
gi|386253228|gb|EIJ02918.1| cold-shock DEAD-box protein A [Escherichia coli B41]
gi|388334084|gb|EIL00692.1| ATP-dependent RNA helicase DeaD [Escherichia coli O103:H25 str.
CVM9340]
gi|388345584|gb|EIL11354.1| ATP-dependent RNA helicase DeaD [Escherichia coli O103:H2 str.
CVM9450]
gi|388387015|gb|EIL48644.1| ATP-dependent RNA helicase DeaD [Escherichia coli KD2]
gi|388389154|gb|EIL50690.1| ATP-dependent RNA helicase DeaD [Escherichia coli KD1]
gi|388407748|gb|EIL68112.1| ATP-dependent RNA helicase DeaD [Escherichia coli 75]
gi|388413520|gb|EIL73512.1| ATP-dependent RNA helicase DeaD [Escherichia coli HM605]
gi|391246540|gb|EIQ05801.1| cold-shock DEAD box protein A [Shigella flexneri 2850-71]
gi|391248085|gb|EIQ07329.1| cold-shock DEAD box protein A [Shigella flexneri CCH060]
gi|391263829|gb|EIQ22829.1| cold-shock DEAD box protein A [Shigella flexneri K-404]
gi|391274986|gb|EIQ33785.1| cold-shock DEAD box protein A [Shigella boydii 4444-74]
gi|391278590|gb|EIQ37291.1| cold-shock DEAD box protein A [Shigella sonnei 3226-85]
gi|391282941|gb|EIQ41570.1| cold-shock DEAD box protein A [Shigella sonnei 3233-85]
gi|391292659|gb|EIQ50980.1| csdA, DEAD-box RNA helicase [Shigella sonnei 4822-66]
gi|391298896|gb|EIQ56883.1| cold-shock DEAD box protein A [Shigella dysenteriae 225-75]
gi|391303208|gb|EIQ61049.1| cold-shock DEAD box protein A [Escherichia coli EPECa12]
gi|391310957|gb|EIQ68607.1| csdA, DEAD-box RNA helicase [Escherichia coli EPEC C342-62]
gi|397895267|gb|EJL11699.1| csdA, DEAD-box RNA helicase [Shigella flexneri 6603-63]
gi|397896313|gb|EJL12732.1| csdA, DEAD-box RNA helicase [Shigella sonnei str. Moseley]
gi|404290266|gb|EEH71973.2| cold-shock DEAD box protein A [Escherichia sp. 1_1_43]
gi|404336683|gb|EJZ63142.1| csdA, DEAD-box RNA helicase [Shigella flexneri 1485-80]
gi|406775928|gb|AFS55352.1| ATP-dependent RNA helicase DeaD [Escherichia coli O104:H4 str.
2009EL-2050]
gi|407052502|gb|AFS72553.1| ATP-dependent RNA helicase DeaD [Escherichia coli O104:H4 str.
2011C-3493]
gi|407067173|gb|AFS88220.1| ATP-dependent RNA helicase DeaD [Escherichia coli O104:H4 str.
2009EL-2071]
gi|408191011|gb|EKI16631.1| cold-shock DEAD-box protein A [Escherichia coli TW15901]
gi|408199108|gb|EKI24317.1| cold-shock DEAD-box protein A [Escherichia coli ARS4.2123]
gi|408199746|gb|EKI24936.1| cold-shock DEAD-box protein A [Escherichia coli TW00353]
gi|408210928|gb|EKI35484.1| cold-shock DEAD-box protein A [Escherichia coli 3006]
gi|408211508|gb|EKI36054.1| cold-shock DEAD-box protein A [Escherichia coli 07798]
gi|408226332|gb|EKI49979.1| cold-shock DEAD-box protein A [Escherichia coli N1]
gi|408341770|gb|EKJ56208.1| cold-shock DEAD-box protein A [Escherichia coli 0.1288]
gi|408459945|gb|EKJ83725.1| ATP-dependent RNA helicase DeaD [Escherichia coli AD30]
gi|408565275|gb|EKK41362.1| cold-shock DEAD-box protein A [Escherichia coli 8.0566]
gi|408566606|gb|EKK42673.1| cold-shock DEAD box protein A [Escherichia coli 8.0569]
gi|429346574|gb|EKY83353.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
11-02092]
gi|429356553|gb|EKY93228.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
11-02033-1]
gi|429357428|gb|EKY94101.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
11-02030]
gi|429372720|gb|EKZ09269.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
11-02093]
gi|429374661|gb|EKZ11200.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
11-02281]
gi|429378343|gb|EKZ14857.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
11-02318]
gi|429388523|gb|EKZ24948.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
11-02913]
gi|429391292|gb|EKZ27696.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
11-03439]
gi|429392301|gb|EKZ28702.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
11-03943]
gi|429402790|gb|EKZ39080.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
11-04080]
gi|429403986|gb|EKZ40266.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429407649|gb|EKZ43900.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429415096|gb|EKZ51266.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429418550|gb|EKZ54693.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429424817|gb|EKZ60915.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429429007|gb|EKZ65078.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429433670|gb|EKZ69701.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429435214|gb|EKZ71233.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429440956|gb|EKZ76930.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429445894|gb|EKZ81833.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429455659|gb|EKZ91514.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
Ec12-0466]
gi|429459374|gb|EKZ95193.1| cold-shock DEAD box protein A [Escherichia coli O104:H4 str.
Ec11-9941]
gi|430874657|gb|ELB98213.1| cold-shock DEAD box protein A [Escherichia coli KTE4]
gi|430884177|gb|ELC07148.1| cold-shock DEAD box protein A [Escherichia coli KTE5]
gi|430891960|gb|ELC14481.1| cold-shock DEAD box protein A [Escherichia coli KTE10]
gi|430896464|gb|ELC18699.1| cold-shock DEAD box protein A [Escherichia coli KTE12]
gi|430904395|gb|ELC26104.1| cold-shock DEAD box protein A [Escherichia coli KTE16]
gi|430905954|gb|ELC27562.1| cold-shock DEAD box protein A [Escherichia coli KTE15]
gi|430913723|gb|ELC34844.1| cold-shock DEAD box protein A [Escherichia coli KTE25]
gi|430915434|gb|ELC36513.1| cold-shock DEAD box protein A [Escherichia coli KTE21]
gi|430928244|gb|ELC48795.1| cold-shock DEAD box protein A [Escherichia coli KTE28]
gi|430933918|gb|ELC54309.1| cold-shock DEAD box protein A [Escherichia coli KTE39]
gi|430937079|gb|ELC57341.1| cold-shock DEAD box protein A [Escherichia coli KTE44]
gi|430942887|gb|ELC63018.1| cold-shock DEAD box protein A [Escherichia coli KTE178]
gi|430951566|gb|ELC70786.1| cold-shock DEAD box protein A [Escherichia coli KTE187]
gi|430961204|gb|ELC79251.1| cold-shock DEAD box protein A [Escherichia coli KTE188]
gi|430964859|gb|ELC82305.1| cold-shock DEAD box protein A [Escherichia coli KTE189]
gi|430971746|gb|ELC88755.1| cold-shock DEAD box protein A [Escherichia coli KTE191]
gi|430980504|gb|ELC97264.1| cold-shock DEAD box protein A [Escherichia coli KTE201]
gi|430996300|gb|ELD12586.1| cold-shock DEAD box protein A [Escherichia coli KTE206]
gi|431005000|gb|ELD20209.1| cold-shock DEAD box protein A [Escherichia coli KTE210]
gi|431014619|gb|ELD28327.1| cold-shock DEAD box protein A [Escherichia coli KTE212]
gi|431021847|gb|ELD35168.1| cold-shock DEAD box protein A [Escherichia coli KTE214]
gi|431026644|gb|ELD39715.1| cold-shock DEAD box protein A [Escherichia coli KTE216]
gi|431036185|gb|ELD47561.1| cold-shock DEAD box protein A [Escherichia coli KTE220]
gi|431039168|gb|ELD50054.1| cold-shock DEAD box protein A [Escherichia coli KTE224]
gi|431049149|gb|ELD59113.1| cold-shock DEAD box protein A [Escherichia coli KTE230]
gi|431058588|gb|ELD67981.1| cold-shock DEAD box protein A [Escherichia coli KTE234]
gi|431060981|gb|ELD70301.1| cold-shock DEAD box protein A [Escherichia coli KTE233]
gi|431072248|gb|ELD80000.1| cold-shock DEAD box protein A [Escherichia coli KTE236]
gi|431078002|gb|ELD85061.1| cold-shock DEAD box protein A [Escherichia coli KTE237]
gi|431082585|gb|ELD88899.1| cold-shock DEAD box protein A [Escherichia coli KTE47]
gi|431089152|gb|ELD94976.1| cold-shock DEAD box protein A [Escherichia coli KTE49]
gi|431091060|gb|ELD96810.1| cold-shock DEAD box protein A [Escherichia coli KTE51]
gi|431098288|gb|ELE03611.1| cold-shock DEAD box protein A [Escherichia coli KTE53]
gi|431113267|gb|ELE16937.1| cold-shock DEAD box protein A [Escherichia coli KTE56]
gi|431118907|gb|ELE21926.1| cold-shock DEAD box protein A [Escherichia coli KTE58]
gi|431121919|gb|ELE24788.1| cold-shock DEAD box protein A [Escherichia coli KTE57]
gi|431126767|gb|ELE29114.1| cold-shock DEAD box protein A [Escherichia coli KTE60]
gi|431129287|gb|ELE31463.1| cold-shock DEAD box protein A [Escherichia coli KTE62]
gi|431136305|gb|ELE38174.1| cold-shock DEAD box protein A [Escherichia coli KTE67]
gi|431147358|gb|ELE48781.1| cold-shock DEAD box protein A [Escherichia coli KTE72]
gi|431157136|gb|ELE57790.1| cold-shock DEAD box protein A [Escherichia coli KTE76]
gi|431161129|gb|ELE61614.1| cold-shock DEAD box protein A [Escherichia coli KTE77]
gi|431169113|gb|ELE69342.1| cold-shock DEAD box protein A [Escherichia coli KTE81]
gi|431179190|gb|ELE79097.1| cold-shock DEAD box protein A [Escherichia coli KTE86]
gi|431188491|gb|ELE87933.1| cold-shock DEAD box protein A [Escherichia coli KTE87]
gi|431188863|gb|ELE88304.1| cold-shock DEAD box protein A [Escherichia coli KTE93]
gi|431197454|gb|ELE96303.1| cold-shock DEAD box protein A [Escherichia coli KTE111]
gi|431208491|gb|ELF06704.1| cold-shock DEAD box protein A [Escherichia coli KTE119]
gi|431211971|gb|ELF09922.1| cold-shock DEAD box protein A [Escherichia coli KTE142]
gi|431219972|gb|ELF17360.1| cold-shock DEAD box protein A [Escherichia coli KTE156]
gi|431232112|gb|ELF27788.1| cold-shock DEAD box protein A [Escherichia coli KTE162]
gi|431236489|gb|ELF31695.1| cold-shock DEAD box protein A [Escherichia coli KTE161]
gi|431241167|gb|ELF35614.1| cold-shock DEAD box protein A [Escherichia coli KTE169]
gi|431241689|gb|ELF36125.1| cold-shock DEAD box protein A [Escherichia coli KTE171]
gi|431253874|gb|ELF47352.1| cold-shock DEAD box protein A [Escherichia coli KTE8]
gi|431255942|gb|ELF49020.1| cold-shock DEAD box protein A [Escherichia coli KTE6]
gi|431263570|gb|ELF55556.1| cold-shock DEAD box protein A [Escherichia coli KTE17]
gi|431271815|gb|ELF62934.1| cold-shock DEAD box protein A [Escherichia coli KTE18]
gi|431272830|gb|ELF63929.1| cold-shock DEAD box protein A [Escherichia coli KTE45]
gi|431280113|gb|ELF71042.1| cold-shock DEAD box protein A [Escherichia coli KTE42]
gi|431282064|gb|ELF72962.1| cold-shock DEAD box protein A [Escherichia coli KTE23]
gi|431290261|gb|ELF80986.1| cold-shock DEAD box protein A [Escherichia coli KTE43]
gi|431300374|gb|ELF89927.1| cold-shock DEAD box protein A [Escherichia coli KTE22]
gi|431306315|gb|ELF94628.1| cold-shock DEAD box protein A [Escherichia coli KTE46]
gi|431308108|gb|ELF96396.1| cold-shock DEAD box protein A [Escherichia coli KTE48]
gi|431316414|gb|ELG04224.1| cold-shock DEAD box protein A [Escherichia coli KTE54]
gi|431325422|gb|ELG12810.1| cold-shock DEAD box protein A [Escherichia coli KTE59]
gi|431328294|gb|ELG15614.1| cold-shock DEAD box protein A [Escherichia coli KTE63]
gi|431336172|gb|ELG23301.1| cold-shock DEAD box protein A [Escherichia coli KTE65]
gi|431338459|gb|ELG25546.1| cold-shock DEAD box protein A [Escherichia coli KTE78]
gi|431346679|gb|ELG33583.1| cold-shock DEAD box protein A [Escherichia coli KTE84]
gi|431350044|gb|ELG36872.1| cold-shock DEAD box protein A [Escherichia coli KTE79]
gi|431353868|gb|ELG40621.1| cold-shock DEAD box protein A [Escherichia coli KTE91]
gi|431361939|gb|ELG48518.1| cold-shock DEAD box protein A [Escherichia coli KTE115]
gi|431366396|gb|ELG52894.1| cold-shock DEAD box protein A [Escherichia coli KTE118]
gi|431378587|gb|ELG63578.1| cold-shock DEAD box protein A [Escherichia coli KTE123]
gi|431393723|gb|ELG77287.1| cold-shock DEAD box protein A [Escherichia coli KTE141]
gi|431409597|gb|ELG92772.1| cold-shock DEAD box protein A [Escherichia coli KTE147]
gi|431418340|gb|ELH00744.1| cold-shock DEAD box protein A [Escherichia coli KTE154]
gi|431424167|gb|ELH06264.1| cold-shock DEAD box protein A [Escherichia coli KTE192]
gi|431429261|gb|ELH11191.1| cold-shock DEAD box protein A [Escherichia coli KTE194]
gi|431431666|gb|ELH13441.1| cold-shock DEAD box protein A [Escherichia coli KTE165]
gi|431437208|gb|ELH18721.1| cold-shock DEAD box protein A [Escherichia coli KTE173]
gi|431442107|gb|ELH23214.1| cold-shock DEAD box protein A [Escherichia coli KTE175]
gi|431451365|gb|ELH31841.1| cold-shock DEAD box protein A [Escherichia coli KTE184]
gi|431461462|gb|ELH41730.1| cold-shock DEAD box protein A [Escherichia coli KTE183]
gi|431465395|gb|ELH45505.1| cold-shock DEAD box protein A [Escherichia coli KTE197]
gi|431479870|gb|ELH59603.1| cold-shock DEAD box protein A [Escherichia coli KTE207]
gi|431487438|gb|ELH67083.1| cold-shock DEAD box protein A [Escherichia coli KTE209]
gi|431489863|gb|ELH69488.1| cold-shock DEAD box protein A [Escherichia coli KTE211]
gi|431492539|gb|ELH72140.1| cold-shock DEAD box protein A [Escherichia coli KTE217]
gi|431496274|gb|ELH75858.1| cold-shock DEAD box protein A [Escherichia coli KTE215]
gi|431503727|gb|ELH82462.1| cold-shock DEAD box protein A [Escherichia coli KTE218]
gi|431505845|gb|ELH84450.1| cold-shock DEAD box protein A [Escherichia coli KTE223]
gi|431511443|gb|ELH89575.1| cold-shock DEAD box protein A [Escherichia coli KTE227]
gi|431522398|gb|ELH99633.1| cold-shock DEAD box protein A [Escherichia coli KTE229]
gi|431527360|gb|ELI04076.1| cold-shock DEAD box protein A [Escherichia coli KTE104]
gi|431532433|gb|ELI08989.1| cold-shock DEAD box protein A [Escherichia coli KTE106]
gi|431541763|gb|ELI17202.1| cold-shock DEAD box protein A [Escherichia coli KTE109]
gi|431549412|gb|ELI23493.1| cold-shock DEAD box protein A [Escherichia coli KTE113]
gi|431562989|gb|ELI36232.1| cold-shock DEAD box protein A [Escherichia coli KTE120]
gi|431566979|gb|ELI39994.1| cold-shock DEAD box protein A [Escherichia coli KTE124]
gi|431594558|gb|ELI64838.1| cold-shock DEAD box protein A [Escherichia coli KTE131]
gi|431598632|gb|ELI68420.1| cold-shock DEAD box protein A [Escherichia coli KTE133]
gi|431602728|gb|ELI72158.1| cold-shock DEAD box protein A [Escherichia coli KTE137]
gi|431613561|gb|ELI82757.1| cold-shock DEAD box protein A [Escherichia coli KTE139]
gi|431617035|gb|ELI86057.1| cold-shock DEAD box protein A [Escherichia coli KTE145]
gi|431625018|gb|ELI93612.1| cold-shock DEAD box protein A [Escherichia coli KTE148]
gi|431626272|gb|ELI94824.1| cold-shock DEAD box protein A [Escherichia coli KTE150]
gi|431632246|gb|ELJ00549.1| cold-shock DEAD box protein A [Escherichia coli KTE153]
gi|431639765|gb|ELJ07614.1| cold-shock DEAD box protein A [Escherichia coli KTE157]
gi|431641609|gb|ELJ09344.1| cold-shock DEAD box protein A [Escherichia coli KTE160]
gi|431654434|gb|ELJ21489.1| cold-shock DEAD box protein A [Escherichia coli KTE166]
gi|431657176|gb|ELJ24143.1| cold-shock DEAD box protein A [Escherichia coli KTE167]
gi|431658983|gb|ELJ25890.1| cold-shock DEAD box protein A [Escherichia coli KTE168]
gi|431668156|gb|ELJ34688.1| cold-shock DEAD box protein A [Escherichia coli KTE174]
gi|431671454|gb|ELJ37735.1| cold-shock DEAD box protein A [Escherichia coli KTE176]
gi|431684919|gb|ELJ50524.1| cold-shock DEAD box protein A [Escherichia coli KTE179]
gi|431686409|gb|ELJ51975.1| cold-shock DEAD box protein A [Escherichia coli KTE180]
gi|431689826|gb|ELJ55321.1| cold-shock DEAD box protein A [Escherichia coli KTE232]
gi|431703140|gb|ELJ67829.1| cold-shock DEAD box protein A [Escherichia coli KTE88]
gi|431713916|gb|ELJ78124.1| cold-shock DEAD box protein A [Escherichia coli KTE90]
gi|431718448|gb|ELJ82522.1| cold-shock DEAD box protein A [Escherichia coli KTE94]
gi|431728647|gb|ELJ92320.1| cold-shock DEAD box protein A [Escherichia coli KTE97]
gi|431732686|gb|ELJ96136.1| cold-shock DEAD box protein A [Escherichia coli KTE99]
gi|432346179|gb|ELL40669.1| ATP-dependent RNA helicase DeaD [Escherichia coli J96]
gi|441607150|emb|CCP96391.1| Cold-shock DEAD-box protein A [Escherichia coli O10:K5(L):H4 str.
ATCC 23506]
gi|441654391|emb|CCQ00940.1| Cold-shock DEAD-box protein A [Escherichia coli O5:K4(L):H4 str.
ATCC 23502]
gi|441713850|emb|CCQ06177.1| Cold-shock DEAD-box protein A [Escherichia coli Nissle 1917]
gi|443423744|gb|AGC88648.1| ATP-dependent RNA helicase DeaD [Escherichia coli APEC O78]
gi|449314691|gb|EMD04853.1| ATP-dependent RNA helicase DeaD [Escherichia coli O08]
gi|449316098|gb|EMD06221.1| ATP-dependent RNA helicase DeaD [Escherichia coli S17]
Length = 629
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 202/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L LQ
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|354543983|emb|CCE40705.1| hypothetical protein CPAR2_107400 [Candida parapsilosis]
Length = 399
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 134/356 (37%), Positives = 207/356 (58%), Gaps = 6/356 (1%)
Query: 41 VGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVF 100
+ +H + F LKPELL+ I GFE PS +Q I Q I G D I QA+SG GKTA F
Sbjct: 22 IKVHRT-FESMKLKPELLKGIYSYGFEAPSAIQSRAIMQIIAGRDTIAQAQSGTGKTATF 80
Query: 101 VLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKD 160
+ L+ + AL+L TRELA QI + + Y+ ++ GG N+ +
Sbjct: 81 SIGMLEAIDSKSKDCQALILSPTRELAIQIQNVVQHLGDYM-NVHTYACVGGKNVGMDIK 139
Query: 161 LLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTP 220
L++ QIV GTPGR+L + R ++LS ++++ ILDE D++ + + + EI+K P
Sbjct: 140 KLQH-GQQIVSGTPGRVLDVIRRRNLSTRHIKILILDEADELF-TKGFKEQIYEIYKQLP 197
Query: 221 HDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL-SELEKNRKL 279
D QV++ SATL E+ + KF DP++I V + ++L G+ Q+Y++ E K L
Sbjct: 198 SDTQVVVVSATLPPEVLEMTSKFTTDPVKILVKRD-DVSLVGIKQYYVQCEQEDWKFDTL 256
Query: 280 NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNK 339
DL D L Q VIF + + L + + NF +H M Q+ER + F+ GN
Sbjct: 257 CDLYDNLTITQAVIFCNTKMKVNWLTDQMRKQNFVVSSMHGDMKQDERDSIMSDFRTGNS 316
Query: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSA 395
R+L++TD+ RGID++++++VINYD+P+ + Y+HR+GR+GRFG KG AI ++ +
Sbjct: 317 RVLISTDVWARGIDVQQISLVINYDLPNDKENYIHRIGRSGRFGRKGTAINLITKS 372
>gi|191168055|ref|ZP_03029855.1| cold-shock DEAD box protein A [Escherichia coli B7A]
gi|218555734|ref|YP_002388647.1| ATP-dependent RNA helicase DeaD [Escherichia coli IAI1]
gi|260857291|ref|YP_003231182.1| ATP-dependent RNA helicase DeaD [Escherichia coli O26:H11 str.
11368]
gi|260869914|ref|YP_003236316.1| ATP-dependent RNA helicase DeaD [Escherichia coli O111:H- str.
11128]
gi|293449499|ref|ZP_06663920.1| ATP-dependent RNA helicase DeaD [Escherichia coli B088]
gi|415787442|ref|ZP_11494070.1| cold-shock DEAD box protein A [Escherichia coli EPECa14]
gi|415820750|ref|ZP_11509857.1| cold-shock DEAD box protein A [Escherichia coli OK1180]
gi|415830686|ref|ZP_11516554.1| cold-shock DEAD box protein A [Escherichia coli OK1357]
gi|417133948|ref|ZP_11978733.1| cold-shock DEAD-box protein A [Escherichia coli 5.0588]
gi|417147141|ref|ZP_11987988.1| cold-shock DEAD-box protein A [Escherichia coli 1.2264]
gi|417157632|ref|ZP_11995256.1| cold-shock DEAD-box protein A [Escherichia coli 96.0497]
gi|417197402|ref|ZP_12016336.1| cold-shock DEAD-box protein A [Escherichia coli 4.0522]
gi|417210759|ref|ZP_12021176.1| cold-shock DEAD-box protein A [Escherichia coli JB1-95]
gi|417295849|ref|ZP_12083096.1| cold-shock DEAD-box protein A [Escherichia coli 900105 (10e)]
gi|417582780|ref|ZP_12233581.1| cold-shock DEAD box protein A [Escherichia coli STEC_B2F1]
gi|417593564|ref|ZP_12244255.1| cold-shock DEAD box protein A [Escherichia coli 2534-86]
gi|417609853|ref|ZP_12260351.1| cold-shock DEAD box protein A [Escherichia coli STEC_DG131-3]
gi|417668651|ref|ZP_12318192.1| cold-shock DEAD box protein A [Escherichia coli STEC_O31]
gi|418040938|ref|ZP_12679170.1| cold-shock DEAD box protein A [Escherichia coli W26]
gi|418941581|ref|ZP_13494903.1| ATP-dependent RNA helicase DeaD [Escherichia coli O157:H43 str.
T22]
gi|419198866|ref|ZP_13742161.1| cold-shock DEAD box protein A [Escherichia coli DEC8A]
gi|419205025|ref|ZP_13748198.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC8B]
gi|419211617|ref|ZP_13754686.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC8C]
gi|419217556|ref|ZP_13760552.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC8D]
gi|419223310|ref|ZP_13766224.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC8E]
gi|419228761|ref|ZP_13771604.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC9A]
gi|419234352|ref|ZP_13777121.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC9B]
gi|419239733|ref|ZP_13782441.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC9C]
gi|419245230|ref|ZP_13787864.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC9D]
gi|419251090|ref|ZP_13793659.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC9E]
gi|419256768|ref|ZP_13799271.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC10A]
gi|419263069|ref|ZP_13805477.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC10B]
gi|419269025|ref|ZP_13811369.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC10C]
gi|419274522|ref|ZP_13816812.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC10D]
gi|419286075|ref|ZP_13828239.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC10F]
gi|419393320|ref|ZP_13934122.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC15A]
gi|419398422|ref|ZP_13939185.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC15B]
gi|419403704|ref|ZP_13944424.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC15C]
gi|419408862|ref|ZP_13949548.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC15D]
gi|419414410|ref|ZP_13955048.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC15E]
gi|419805326|ref|ZP_14330465.1| cold-shock DEAD box protein A [Escherichia coli AI27]
gi|419877663|ref|ZP_14399211.1| ATP-dependent RNA helicase DeaD [Escherichia coli O111:H11 str.
CVM9534]
gi|419884139|ref|ZP_14405127.1| ATP-dependent RNA helicase DeaD [Escherichia coli O111:H11 str.
CVM9545]
gi|419892518|ref|ZP_14412537.1| ATP-dependent RNA helicase DeaD [Escherichia coli O111:H8 str.
CVM9570]
gi|419894286|ref|ZP_14414204.1| ATP-dependent RNA helicase DeaD [Escherichia coli O111:H8 str.
CVM9574]
gi|419903929|ref|ZP_14422942.1| ATP-dependent RNA helicase DeaD [Escherichia coli O26:H11 str.
CVM9942]
gi|419909654|ref|ZP_14428193.1| ATP-dependent RNA helicase DeaD [Escherichia coli O26:H11 str.
CVM10026]
gi|419947962|ref|ZP_14464270.1| ATP-dependent RNA helicase DeaD [Escherichia coli CUMT8]
gi|420088972|ref|ZP_14600820.1| ATP-dependent RNA helicase DeaD [Escherichia coli O111:H8 str.
CVM9602]
gi|420094609|ref|ZP_14606188.1| ATP-dependent RNA helicase DeaD [Escherichia coli O111:H8 str.
CVM9634]
gi|420098957|ref|ZP_14610204.1| ATP-dependent RNA helicase DeaD [Escherichia coli O111:H11 str.
CVM9455]
gi|420105866|ref|ZP_14616299.1| ATP-dependent RNA helicase DeaD [Escherichia coli O111:H11 str.
CVM9553]
gi|420118189|ref|ZP_14627522.1| ATP-dependent RNA helicase DeaD [Escherichia coli O26:H11 str.
CVM10021]
gi|420118590|ref|ZP_14627911.1| ATP-dependent RNA helicase DeaD [Escherichia coli O26:H11 str.
CVM10030]
gi|420130129|ref|ZP_14638633.1| ATP-dependent RNA helicase DeaD [Escherichia coli O26:H11 str.
CVM10224]
gi|420135150|ref|ZP_14643244.1| ATP-dependent RNA helicase DeaD [Escherichia coli O26:H11 str.
CVM9952]
gi|423707463|ref|ZP_17681843.1| cold-shock DEAD box protein A [Escherichia coli B799]
gi|424746853|ref|ZP_18175070.1| ATP-dependent RNA helicase DeaD [Escherichia coli O26:H11 str.
CFSAN001629]
gi|424757937|ref|ZP_18185663.1| ATP-dependent RNA helicase DeaD [Escherichia coli O111:H11 str.
CFSAN001630]
gi|424770293|ref|ZP_18197499.1| ATP-dependent RNA helicase DeaD [Escherichia coli O111:H8 str.
CFSAN001632]
gi|425381439|ref|ZP_18765438.1| cold-shock DEAD-box protein A [Escherichia coli EC1865]
gi|432751639|ref|ZP_19986222.1| cold-shock DEAD box protein A [Escherichia coli KTE29]
gi|432828801|ref|ZP_20062419.1| cold-shock DEAD box protein A [Escherichia coli KTE135]
gi|432969232|ref|ZP_20158144.1| cold-shock DEAD box protein A [Escherichia coli KTE203]
gi|433093552|ref|ZP_20279809.1| cold-shock DEAD box protein A [Escherichia coli KTE138]
gi|190901924|gb|EDV61673.1| cold-shock DEAD box protein A [Escherichia coli B7A]
gi|218362502|emb|CAR00126.1| ATP-dependent RNA helicase [Escherichia coli IAI1]
gi|257755940|dbj|BAI27442.1| ATP-dependent RNA helicase DeaD [Escherichia coli O26:H11 str.
11368]
gi|257766270|dbj|BAI37765.1| ATP-dependent RNA helicase DeaD [Escherichia coli O111:H- str.
11128]
gi|291322589|gb|EFE62018.1| ATP-dependent RNA helicase DeaD [Escherichia coli B088]
gi|323154376|gb|EFZ40577.1| cold-shock DEAD box protein A [Escherichia coli EPECa14]
gi|323178875|gb|EFZ64451.1| cold-shock DEAD box protein A [Escherichia coli OK1180]
gi|323183117|gb|EFZ68515.1| cold-shock DEAD box protein A [Escherichia coli OK1357]
gi|345333885|gb|EGW66331.1| cold-shock DEAD box protein A [Escherichia coli 2534-86]
gi|345336237|gb|EGW68674.1| cold-shock DEAD box protein A [Escherichia coli STEC_B2F1]
gi|345355529|gb|EGW87739.1| cold-shock DEAD box protein A [Escherichia coli STEC_DG131-3]
gi|375323081|gb|EHS68804.1| ATP-dependent RNA helicase DeaD [Escherichia coli O157:H43 str.
T22]
gi|378044467|gb|EHW06884.1| cold-shock DEAD box protein A [Escherichia coli DEC8A]
gi|378046220|gb|EHW08600.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC8B]
gi|378050812|gb|EHW13139.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC8C]
gi|378060145|gb|EHW22344.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC8D]
gi|378063504|gb|EHW25673.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC8E]
gi|378070354|gb|EHW32433.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC9A]
gi|378075127|gb|EHW37155.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC9B]
gi|378080735|gb|EHW42692.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC9C]
gi|378088227|gb|EHW50082.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC9D]
gi|378091508|gb|EHW53338.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC9E]
gi|378098084|gb|EHW59827.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC10A]
gi|378103358|gb|EHW65027.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC10B]
gi|378108110|gb|EHW69726.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC10C]
gi|378114247|gb|EHW75804.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC10D]
gi|378127211|gb|EHW88601.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC10F]
gi|378235574|gb|EHX95642.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC15A]
gi|378241356|gb|EHY01323.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC15B]
gi|378245959|gb|EHY05896.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC15C]
gi|378253423|gb|EHY13301.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC15D]
gi|378257675|gb|EHY17512.1| csdA, DEAD-box RNA helicase [Escherichia coli DEC15E]
gi|383476183|gb|EID68130.1| cold-shock DEAD box protein A [Escherichia coli W26]
gi|384471667|gb|EIE55739.1| cold-shock DEAD box protein A [Escherichia coli AI27]
gi|385709837|gb|EIG46830.1| cold-shock DEAD box protein A [Escherichia coli B799]
gi|386151802|gb|EIH03091.1| cold-shock DEAD-box protein A [Escherichia coli 5.0588]
gi|386163081|gb|EIH24877.1| cold-shock DEAD-box protein A [Escherichia coli 1.2264]
gi|386166382|gb|EIH32902.1| cold-shock DEAD-box protein A [Escherichia coli 96.0497]
gi|386188707|gb|EIH77496.1| cold-shock DEAD-box protein A [Escherichia coli 4.0522]
gi|386195363|gb|EIH89598.1| cold-shock DEAD-box protein A [Escherichia coli JB1-95]
gi|386259293|gb|EIJ14767.1| cold-shock DEAD-box protein A [Escherichia coli 900105 (10e)]
gi|388339168|gb|EIL05554.1| ATP-dependent RNA helicase DeaD [Escherichia coli O111:H11 str.
CVM9534]
gi|388347670|gb|EIL13330.1| ATP-dependent RNA helicase DeaD [Escherichia coli O111:H8 str.
CVM9570]
gi|388356032|gb|EIL20830.1| ATP-dependent RNA helicase DeaD [Escherichia coli O111:H11 str.
CVM9545]
gi|388364279|gb|EIL28143.1| ATP-dependent RNA helicase DeaD [Escherichia coli O111:H8 str.
CVM9574]
gi|388368861|gb|EIL32482.1| ATP-dependent RNA helicase DeaD [Escherichia coli O26:H11 str.
CVM9942]
gi|388372720|gb|EIL36133.1| ATP-dependent RNA helicase DeaD [Escherichia coli O26:H11 str.
CVM10026]
gi|388422137|gb|EIL81726.1| ATP-dependent RNA helicase DeaD [Escherichia coli CUMT8]
gi|394380394|gb|EJE58138.1| ATP-dependent RNA helicase DeaD [Escherichia coli O26:H11 str.
CVM10224]
gi|394389040|gb|EJE66232.1| ATP-dependent RNA helicase DeaD [Escherichia coli O111:H8 str.
CVM9602]
gi|394395621|gb|EJE72048.1| ATP-dependent RNA helicase DeaD [Escherichia coli O111:H8 str.
CVM9634]
gi|394400981|gb|EJE76842.1| ATP-dependent RNA helicase DeaD [Escherichia coli O26:H11 str.
CVM10021]
gi|394417868|gb|EJE91580.1| ATP-dependent RNA helicase DeaD [Escherichia coli O111:H11 str.
CVM9553]
gi|394420599|gb|EJE94121.1| ATP-dependent RNA helicase DeaD [Escherichia coli O26:H11 str.
CVM9952]
gi|394423908|gb|EJE97119.1| ATP-dependent RNA helicase DeaD [Escherichia coli O111:H11 str.
CVM9455]
gi|394432968|gb|EJF05031.1| ATP-dependent RNA helicase DeaD [Escherichia coli O26:H11 str.
CVM10030]
gi|397783898|gb|EJK94755.1| cold-shock DEAD box protein A [Escherichia coli STEC_O31]
gi|408294579|gb|EKJ12961.1| cold-shock DEAD-box protein A [Escherichia coli EC1865]
gi|421942697|gb|EKU00020.1| ATP-dependent RNA helicase DeaD [Escherichia coli O111:H8 str.
CFSAN001632]
gi|421947473|gb|EKU04545.1| ATP-dependent RNA helicase DeaD [Escherichia coli O26:H11 str.
CFSAN001629]
gi|421948977|gb|EKU05974.1| ATP-dependent RNA helicase DeaD [Escherichia coli O111:H11 str.
CFSAN001630]
gi|431294815|gb|ELF84994.1| cold-shock DEAD box protein A [Escherichia coli KTE29]
gi|431383655|gb|ELG67779.1| cold-shock DEAD box protein A [Escherichia coli KTE135]
gi|431468942|gb|ELH48875.1| cold-shock DEAD box protein A [Escherichia coli KTE203]
gi|431608202|gb|ELI77550.1| cold-shock DEAD box protein A [Escherichia coli KTE138]
Length = 629
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 202/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L LQ
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|432467483|ref|ZP_19709562.1| cold-shock DEAD box protein A [Escherichia coli KTE205]
gi|433074422|ref|ZP_20261064.1| cold-shock DEAD box protein A [Escherichia coli KTE129]
gi|433184885|ref|ZP_20369123.1| cold-shock DEAD box protein A [Escherichia coli KTE85]
gi|430991969|gb|ELD08368.1| cold-shock DEAD box protein A [Escherichia coli KTE205]
gi|431584820|gb|ELI56795.1| cold-shock DEAD box protein A [Escherichia coli KTE129]
gi|431703497|gb|ELJ68184.1| cold-shock DEAD box protein A [Escherichia coli KTE85]
Length = 629
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 202/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L LQ
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|401411585|ref|XP_003885240.1| Eukaryotic initiation factor, related [Neospora caninum Liverpool]
gi|325119659|emb|CBZ55212.1| Eukaryotic initiation factor, related [Neospora caninum Liverpool]
Length = 487
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 133/347 (38%), Positives = 204/347 (58%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F ++ L+ ELL I + GFE PS +Q E IP A+ G +++ +AK+G GKTA F + L++
Sbjct: 116 FEEYFLRRELLMGIFEKGFEKPSPIQEESIPIALAGKNILARAKNGTGKTAAFSIPLLEK 175
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ + + L+L TRELA Q + ++ +++ V GG +++ D+++ P
Sbjct: 176 CQTSKRYIQGLILVPTRELALQTSAVVKAIGKHM-NVQCMVSTGGTSLR--DDIMRLYNP 232
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
++ GTPGRIL LA L N ++DE DK+L S + + V+E+ K P ++Q++
Sbjct: 233 VHVLCGTPGRILDLANKGVADLSNCHMVVMDEADKLL-SAEFQPIVEELIKFVPRERQIL 291
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
M+SAT ++ K++ D EI + DE LTL GL Q+Y + E +K LN L L
Sbjct: 292 MYSATFPVTVKDFKNKYLPDAHEINLMDE--LTLKGLTQYYAFVEERQKVHCLNTLFSKL 349
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF SV+R L K + E + IH+ M Q R + F+ G R LV++D
Sbjct: 350 QINQAIIFCNSVTRVELLAKKITELGYSCFYIHARMMQSHRNRVFHDFRNGACRCLVSSD 409
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L RGIDI+ VN+VIN+D P +++TYLHR+GR+GRFG GLAI ++
Sbjct: 410 LFTRGIDIQSVNVVINFDFPKNSETYLHRIGRSGRFGHLGLAINLIT 456
>gi|50420221|ref|XP_458643.1| DEHA2D04048p [Debaryomyces hansenii CBS767]
gi|74602737|sp|Q6BT27.1|FAL1_DEBHA RecName: Full=ATP-dependent RNA helicase FAL1
gi|49654310|emb|CAG86782.1| DEHA2D04048p [Debaryomyces hansenii CBS767]
Length = 399
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 138/374 (36%), Positives = 218/374 (58%), Gaps = 9/374 (2%)
Query: 41 VGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVF 100
+ +H++ F LK +LL+ I GFE PS +Q I Q I G D I QA+SG GKTA F
Sbjct: 22 IKVHAT-FESMNLKTDLLKGIYGYGFEAPSAIQSRAIMQIISGKDTIAQAQSGTGKTATF 80
Query: 101 VLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKD 160
+ L+ + AL+L TRELA QI + Y+ ++ GG ++ +D
Sbjct: 81 SIGMLEVIDTKSKDCQALILSPTRELAQQIQSVVKHLGDYM-NVHTHACIGGTHVG--ED 137
Query: 161 LLK-NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
+ K + QIV GTPGR++ + + ++L+ +N++ ILDE D+++ + + + EI++
Sbjct: 138 IKKLQQGQQIVSGTPGRVVDMIKRRNLATRNIKMMILDEADELM-TKGFKEQIYEIYRYL 196
Query: 220 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL-SELEKNRK 278
P QV++ SATLS+E+ V KF DP++I V + +TL G+ Q++I+ E K
Sbjct: 197 PPGVQVVVVSATLSREVLEVTGKFTTDPVKILVKRD-DITLEGIKQYHIQCEKEDWKFDT 255
Query: 279 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGN 338
L DL D+L Q VIF + + L + + NF + +H M Q+ER + F+ GN
Sbjct: 256 LCDLYDSLTITQAVIFCNTKVKVNWLTDQMKKANFTVVAMHGDMKQDERDSIMNDFRTGN 315
Query: 339 KRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDS 398
R+L++TD+ RGID+++V++VINYD+P + Y+HR+GR+GRFG KG+AI V+ D
Sbjct: 316 SRVLISTDVWARGIDVQQVSLVINYDLPTDKENYVHRIGRSGRFGRKGVAINLVTK-EDV 374
Query: 399 DILNQVSKFMFLLI 412
D L + +F + I
Sbjct: 375 DELRDIERFYRIRI 388
>gi|297521217|ref|ZP_06939603.1| ATP-dependent RNA helicase DeaD [Escherichia coli OP50]
Length = 569
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 202/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L LQ
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|340000839|ref|YP_004731723.1| ATP-dependent RNA helicase [Salmonella bongori NCTC 12419]
gi|339514201|emb|CCC31964.1| ATP-dependent RNA helicase (dead-box protein) [Salmonella bongori
NCTC 12419]
Length = 647
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/373 (35%), Positives = 204/373 (54%), Gaps = 4/373 (1%)
Query: 40 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 99
Y+ + F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA
Sbjct: 17 YMAEFETTFADLGLKAPILEALTDLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKTAA 76
Query: 100 FVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHK 159
F L L +P LVL TRELA Q+ FS ++ + V YGG +
Sbjct: 77 FSLPLLNNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQL 136
Query: 160 DLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
L+ + PQIVVGTPGR+L + L L + +LDE D+ML + DV+ I
Sbjct: 137 RALR-QGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQI 194
Query: 220 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKL 279
P Q +FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L
Sbjct: 195 PEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEAL 253
Query: 280 NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNK 339
L+A DF+ +IFV++ + E+ + L + S ++ M+Q R + K+G
Sbjct: 254 VRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRL 313
Query: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSD 399
IL+ATD+ RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + +
Sbjct: 314 DILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERR 372
Query: 400 ILNQVSKFMFLLI 412
+L + + M L I
Sbjct: 373 LLRNIERTMKLTI 385
>gi|419959496|ref|ZP_14475549.1| ATP-dependent RNA helicase DeaD [Enterobacter cloacae subsp.
cloacae GS1]
gi|295097653|emb|CBK86743.1| ATP-dependent RNA helicase CsdA [Enterobacter cloacae subsp.
cloacae NCTC 9394]
gi|388605577|gb|EIM34794.1| ATP-dependent RNA helicase DeaD [Enterobacter cloacae subsp.
cloacae GS1]
Length = 631
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/365 (35%), Positives = 202/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L L
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLSGRDVLGMAQTGSGKTAAFSLPLLNN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P+ LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 IDPDLRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWSVYGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|254819463|ref|ZP_05224464.1| ATP-dependent rna helicase, dead/deah box family protein
[Mycobacterium intracellulare ATCC 13950]
gi|379746016|ref|YP_005336837.1| ATP-dependent rna helicase, dead/deah box family protein
[Mycobacterium intracellulare ATCC 13950]
gi|378798380|gb|AFC42516.1| ATP-dependent rna helicase, dead/deah box family protein
[Mycobacterium intracellulare ATCC 13950]
Length = 567
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 126/353 (35%), Positives = 195/353 (55%), Gaps = 3/353 (0%)
Query: 41 VGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVF 100
G S+ F D + P +LRA+ D G+E P+ +Q IP + G DV+ A++G GKTA F
Sbjct: 8 TGAASTTFADLQIHPSVLRAVADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAF 67
Query: 101 VLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKD 160
+ L + + ALVL TRELA Q+ F R+ +LP I V YGG + +
Sbjct: 68 AIPILSKIDVTSTATQALVLAPTRELALQVAEAFSRYGAHLPKINVLPIYGGSSYSVQLA 127
Query: 161 LLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTP 220
L+ +VVGTPGR++ L L +V + +LDE D+ML ++ +V I TP
Sbjct: 128 GLRRGA-HVVVGTPGRVIDHLERGTLDLSHVDYLVLDEADEML-TMGFAEEVDRILSETP 185
Query: 221 HDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLN 280
KQV +FSAT+ IR + K++ DP+E+ + T + Q YI+++ K L
Sbjct: 186 EYKQVALFSATMPPAIRKLTTKYLHDPLEVSTKAKTA-TAENISQRYIQVAGPRKMDALT 244
Query: 281 DLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKR 340
+L+ F +++FV++ E+ + L F + I+ + Q +R K+G+
Sbjct: 245 RVLEVEPFEAMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTVAALKDGSID 304
Query: 341 ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
ILVATD+ RG+D+ER++ V+NYD+P ++Y+HR+GR GR G G A+ FVS
Sbjct: 305 ILVATDVAARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGTALLFVS 357
>gi|39546364|ref|NP_462193.2| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|56415212|ref|YP_152287.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|161616286|ref|YP_001590251.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|162139541|ref|YP_218208.2| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|167552072|ref|ZP_02345825.1| cold-shock DEAD box protein A [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|167990155|ref|ZP_02571255.1| cold-shock DEAD box protein A [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168231889|ref|ZP_02656947.1| cold-shock DEAD box protein A [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168237981|ref|ZP_02663039.1| cold-shock DEAD box protein A [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|168243114|ref|ZP_02668046.1| cold-shock DEAD box protein A [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|168262709|ref|ZP_02684682.1| cold-shock DEAD box protein A [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168819651|ref|ZP_02831651.1| cold-shock DEAD box protein A [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|194447369|ref|YP_002047310.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194470855|ref|ZP_03076839.1| cold-shock DEAD box protein A [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194736232|ref|YP_002116230.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197249912|ref|YP_002148207.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197265213|ref|ZP_03165287.1| cold-shock DEAD box protein A [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197364142|ref|YP_002143779.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|204928320|ref|ZP_03219520.1| cold-shock DEAD box protein A [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|238910075|ref|ZP_04653912.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|374979304|ref|ZP_09720643.1| Cold-shock DEAD-box protein A [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|375116132|ref|ZP_09761302.1| cold-shock DEAD box protein A [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|378452097|ref|YP_005239457.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|378985877|ref|YP_005249033.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|386592966|ref|YP_006089366.1| cold-shock DEAD-box protein A [Salmonella enterica subsp. enterica
serovar Heidelberg str. B182]
gi|409246993|ref|YP_006887695.1| Cold-shock DEAD box protein A homolog; ATP-dependent RNA helicase
deaD homolog [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|416423855|ref|ZP_11691189.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|416433550|ref|ZP_11697010.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|416440921|ref|ZP_11701231.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|416447953|ref|ZP_11706157.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|416454519|ref|ZP_11710369.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|416460961|ref|ZP_11715069.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|416462675|ref|ZP_11715621.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|416475251|ref|ZP_11720544.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|416492619|ref|ZP_11727548.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|416498684|ref|ZP_11730440.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|416505802|ref|ZP_11734148.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|416516085|ref|ZP_11738963.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. ATCC BAA710]
gi|416526952|ref|ZP_11742790.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. LQC 10]
gi|416534115|ref|ZP_11746933.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
gi|416546607|ref|ZP_11754001.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|416553507|ref|ZP_11757758.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 29N]
gi|416557686|ref|ZP_11759691.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
gi|416568340|ref|ZP_11764692.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 4441 H]
gi|416577486|ref|ZP_11769822.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|416586132|ref|ZP_11775377.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|416589306|ref|ZP_11776958.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|416600917|ref|ZP_11784680.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|416605391|ref|ZP_11786879.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|416614872|ref|ZP_11793072.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|416625754|ref|ZP_11798632.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|416629766|ref|ZP_11800329.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|416638409|ref|ZP_11803880.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|416646832|ref|ZP_11807940.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|416659229|ref|ZP_11814707.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|416670505|ref|ZP_11820143.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|416699912|ref|ZP_11828926.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|416706491|ref|ZP_11831703.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|416714041|ref|ZP_11837492.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|416718686|ref|ZP_11840794.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|416725823|ref|ZP_11846046.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|416732948|ref|ZP_11850039.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|416736430|ref|ZP_11852057.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|416750623|ref|ZP_11859793.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|416754910|ref|ZP_11861702.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|416765634|ref|ZP_11868939.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|416771441|ref|ZP_11872706.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|417352438|ref|ZP_12129658.1| Cold-shock DEAD-box protein A [Salmonella enterica subsp. enterica
serovar Gaminara str. A4-567]
gi|417368202|ref|ZP_12139841.1| Cold-shock DEAD-box protein A [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
gi|417393746|ref|ZP_12156162.1| ATP-dependent RNA helicase DbpA [Salmonella enterica subsp.
enterica serovar Minnesota str. A4-603]
gi|417469971|ref|ZP_12166236.1| Cold-shock DEAD-box protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. S5-403]
gi|417483687|ref|ZP_12172191.1| Cold-shock DEAD-box protein A [Salmonella enterica subsp. enterica
serovar Rubislaw str. A4-653]
gi|418482452|ref|ZP_13051468.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
gi|418488868|ref|ZP_13056262.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035278]
gi|418494314|ref|ZP_13060768.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035318]
gi|418500511|ref|ZP_13066907.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035320]
gi|418505778|ref|ZP_13072124.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035321]
gi|418507280|ref|ZP_13073604.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035327]
gi|418514497|ref|ZP_13080697.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Pomona str. ATCC 10729]
gi|418524408|ref|ZP_13090393.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008286]
gi|418788882|ref|ZP_13344674.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19447]
gi|418794385|ref|ZP_13350106.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19449]
gi|418797585|ref|ZP_13353271.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19567]
gi|419729823|ref|ZP_14256779.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|419732862|ref|ZP_14259766.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|419741319|ref|ZP_14268020.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
gi|419742949|ref|ZP_14269618.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41566]
gi|419748977|ref|ZP_14275467.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41565]
gi|421570364|ref|ZP_16016055.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00322]
gi|421574256|ref|ZP_16019881.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00325]
gi|421579331|ref|ZP_16024895.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00326]
gi|421582630|ref|ZP_16028163.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00328]
gi|421886999|ref|ZP_16318163.1| Cysteine sulfinate desulfinase [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|440763674|ref|ZP_20942711.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Agona str. SH11G1113]
gi|440770548|ref|ZP_20949497.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Agona str. SH08SF124]
gi|440775107|ref|ZP_20953992.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Agona str. SH10GFN094]
gi|452122900|ref|YP_007473148.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Javiana str. CFSAN001992]
gi|56129469|gb|AAV78975.1| ATP-dependent RNA helicase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|161365650|gb|ABX69418.1| hypothetical protein SPAB_04091 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194405673|gb|ACF65892.1| cold-shock DEAD box protein A [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194457219|gb|EDX46058.1| cold-shock DEAD box protein A [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194711734|gb|ACF90955.1| cold-shock DEAD box protein A [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197095619|emb|CAR61187.1| ATP-dependent RNA helicase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197213615|gb|ACH51012.1| cold-shock DEAD box protein A [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197243468|gb|EDY26088.1| cold-shock DEAD box protein A [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197289140|gb|EDY28509.1| cold-shock DEAD box protein A [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|204322642|gb|EDZ07839.1| cold-shock DEAD box protein A [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205323189|gb|EDZ11028.1| cold-shock DEAD box protein A [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205331110|gb|EDZ17874.1| cold-shock DEAD box protein A [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205333912|gb|EDZ20676.1| cold-shock DEAD box protein A [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205337772|gb|EDZ24536.1| cold-shock DEAD box protein A [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|205343559|gb|EDZ30323.1| cold-shock DEAD box protein A [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205348425|gb|EDZ35056.1| cold-shock DEAD box protein A [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|267995476|gb|ACY90361.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|312914306|dbj|BAJ38280.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|320087727|emb|CBY97491.1| Cold-shock DEAD box protein A homolog; ATP-dependent RNA helicase
deaD homolog [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|321225964|gb|EFX51018.1| Cold-shock DEAD-box protein A [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322615285|gb|EFY12206.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322618356|gb|EFY15247.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322622839|gb|EFY19683.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322626839|gb|EFY23636.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322631408|gb|EFY28168.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322635325|gb|EFY32039.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322643460|gb|EFY40023.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322647104|gb|EFY43605.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322648907|gb|EFY45352.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322655099|gb|EFY51410.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322657702|gb|EFY53970.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322664198|gb|EFY60396.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322667481|gb|EFY63643.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322674729|gb|EFY70821.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322675638|gb|EFY71711.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322682274|gb|EFY78297.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322684877|gb|EFY80875.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|322716278|gb|EFZ07849.1| cold-shock DEAD box protein A [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|323191728|gb|EFZ76980.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323199035|gb|EFZ84132.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323204265|gb|EFZ89274.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323211335|gb|EFZ96179.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323214723|gb|EFZ99472.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323224056|gb|EGA08349.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323230295|gb|EGA14414.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323233271|gb|EGA17365.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323239308|gb|EGA23358.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323242441|gb|EGA26467.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323246951|gb|EGA30917.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323254116|gb|EGA37936.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323255233|gb|EGA39010.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323262696|gb|EGA46252.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323264006|gb|EGA47514.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323269392|gb|EGA52847.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|353566576|gb|EHC32012.1| Cold-shock DEAD-box protein A [Salmonella enterica subsp. enterica
serovar Gaminara str. A4-567]
gi|353587236|gb|EHC46600.1| Cold-shock DEAD-box protein A [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
gi|353607786|gb|EHC61556.1| ATP-dependent RNA helicase DbpA [Salmonella enterica subsp.
enterica serovar Minnesota str. A4-603]
gi|353626333|gb|EHC74897.1| Cold-shock DEAD-box protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. S5-403]
gi|353634711|gb|EHC81210.1| Cold-shock DEAD-box protein A [Salmonella enterica subsp. enterica
serovar Rubislaw str. A4-653]
gi|363555619|gb|EHL39843.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|363556607|gb|EHL40820.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. LQC 10]
gi|363562827|gb|EHL46916.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 29N]
gi|363562914|gb|EHL47001.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. ATCC BAA710]
gi|363567739|gb|EHL51737.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
gi|363577685|gb|EHL61504.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 4441 H]
gi|363578339|gb|EHL62150.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
gi|366062132|gb|EHN26369.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035318]
gi|366063483|gb|EHN27701.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
gi|366068085|gb|EHN32233.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035321]
gi|366068966|gb|EHN33098.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035320]
gi|366069249|gb|EHN33374.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035278]
gi|366078748|gb|EHN42746.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Pomona str. ATCC 10729]
gi|366081588|gb|EHN45531.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035327]
gi|366830749|gb|EHN57617.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|372207267|gb|EHP20766.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008286]
gi|379983376|emb|CCF90436.1| Cysteine sulfinate desulfinase [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|381291997|gb|EIC33207.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
gi|381296125|gb|EIC37233.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|381302214|gb|EIC43260.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|381312758|gb|EIC53552.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41566]
gi|381312973|gb|EIC53766.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41565]
gi|383800007|gb|AFH47089.1| Cold-shock DEAD-box protein A [Salmonella enterica subsp. enterica
serovar Heidelberg str. B182]
gi|392761775|gb|EJA18594.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19449]
gi|392761940|gb|EJA18758.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19447]
gi|392769024|gb|EJA25770.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19567]
gi|402521865|gb|EJW29197.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00326]
gi|402524359|gb|EJW31658.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00322]
gi|402525757|gb|EJW33043.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00325]
gi|402532810|gb|EJW39998.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00328]
gi|436411246|gb|ELP09199.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Agona str. SH08SF124]
gi|436411721|gb|ELP09669.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Agona str. SH10GFN094]
gi|436419306|gb|ELP17184.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Agona str. SH11G1113]
gi|451911904|gb|AGF83710.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Javiana str. CFSAN001992]
Length = 629
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/365 (35%), Positives = 201/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L L
Sbjct: 8 FADLGLKAPILEALTDLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKTAAFSLPLLNN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|379753312|ref|YP_005341984.1| ATP-dependent rna helicase, dead/deah box family protein
[Mycobacterium intracellulare MOTT-02]
gi|379760733|ref|YP_005347130.1| ATP-dependent rna helicase, dead/deah box family protein
[Mycobacterium intracellulare MOTT-64]
gi|406029614|ref|YP_006728505.1| Cold-shock DEAD box protein A -like protein [Mycobacterium indicus
pranii MTCC 9506]
gi|378803528|gb|AFC47663.1| ATP-dependent rna helicase, dead/deah box family protein
[Mycobacterium intracellulare MOTT-02]
gi|378808675|gb|AFC52809.1| ATP-dependent rna helicase, dead/deah box family protein
[Mycobacterium intracellulare MOTT-64]
gi|405128161|gb|AFS13416.1| Cold-shock DEAD box protein A -like protein [Mycobacterium indicus
pranii MTCC 9506]
Length = 567
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 126/353 (35%), Positives = 195/353 (55%), Gaps = 3/353 (0%)
Query: 41 VGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVF 100
G S+ F D + P +LRA+ D G+E P+ +Q IP + G DV+ A++G GKTA F
Sbjct: 8 TGAASTTFADLQIHPSVLRAVADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAF 67
Query: 101 VLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKD 160
+ L + + ALVL TRELA Q+ F R+ +LP I V YGG + +
Sbjct: 68 AIPILSKIDVTSTATQALVLAPTRELALQVAEAFSRYGAHLPKINVLPIYGGSSYSVQLA 127
Query: 161 LLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTP 220
L+ +VVGTPGR++ L L +V + +LDE D+ML ++ +V I TP
Sbjct: 128 GLRRGA-HVVVGTPGRVIDHLERGTLDLSHVDYLVLDEADEML-TMGFAEEVDRILSETP 185
Query: 221 HDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLN 280
KQV +FSAT+ IR + K++ DP+E+ + T + Q YI+++ K L
Sbjct: 186 EYKQVALFSATMPPAIRKLTTKYLHDPLEVSTKAKTA-TAENISQRYIQVAGPRKMDALT 244
Query: 281 DLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKR 340
+L+ F +++FV++ E+ + L F + I+ + Q +R K+G+
Sbjct: 245 RVLEVEPFEAMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTVAALKDGSID 304
Query: 341 ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
ILVATD+ RG+D+ER++ V+NYD+P ++Y+HR+GR GR G G A+ FVS
Sbjct: 305 ILVATDVAARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGTALLFVS 357
>gi|357018629|ref|ZP_09080894.1| ATP-dependent rna helicase, dead/deah box family protein
[Mycobacterium thermoresistibile ATCC 19527]
gi|356481572|gb|EHI14675.1| ATP-dependent rna helicase, dead/deah box family protein
[Mycobacterium thermoresistibile ATCC 19527]
Length = 564
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 125/346 (36%), Positives = 196/346 (56%), Gaps = 3/346 (0%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D + P +LRA+ D G+E PS +Q IP + G DV+ A++G GKTA F + L +
Sbjct: 8 FADLQIHPAVLRAVGDVGYETPSAIQAATIPAMMAGSDVVGLAQTGTGKTAAFAIPILSK 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ ALVL TRELA Q+ F R+ +LPD++V YGG + + L+
Sbjct: 68 IDTASRATQALVLAPTRELALQVAEAFGRYGAHLPDVQVLPIYGGSSYTVQLSGLRRGA- 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR++ L L + + +LDE D+ML+ + DV+ I TP KQV +
Sbjct: 127 QIVVGTPGRVIDHLDRGTLDLSRLDYLVLDEADEMLQ-MGFAEDVERILADTPEYKQVAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ IR + K++ DP+E+ V T + Q +I+++ K L +L+
Sbjct: 186 FSATMPAAIRKLTTKYLHDPVEVTVKARTA-TAENITQRFIQVAGPRKMDALTRVLETEP 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F +++FV++ EL + L F + I+ ++Q +R K+G+ IL+ATD+
Sbjct: 245 FEAMIVFVRTKQATEELAERLRSRGFAAAAINGDIAQAQRERTIAALKDGSLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
RG+D++R++ V+NYD+P ++Y+HR+GR GR G G A+ FV+
Sbjct: 305 AARGLDVDRISHVVNYDIPHDTESYVHRIGRTGRAGRSGNALLFVT 350
>gi|417520797|ref|ZP_12182640.1| Cold-shock DEAD-box protein A [Salmonella enterica subsp. enterica
serovar Uganda str. R8-3404]
gi|353643061|gb|EHC87340.1| Cold-shock DEAD-box protein A [Salmonella enterica subsp. enterica
serovar Uganda str. R8-3404]
Length = 614
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/365 (35%), Positives = 201/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L L
Sbjct: 8 FADLGLKAPILEALTDLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKTAAFSLPLLNN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|226468140|emb|CAX76297.1| Eukaryotic initiation factor 4A [Schistosoma japonicum]
Length = 392
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 144/348 (41%), Positives = 215/348 (61%), Gaps = 5/348 (1%)
Query: 47 GFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQ 106
GF LK ELLR I G+E PS +Q I ++ G DVI QA+SG GKTA F +S LQ
Sbjct: 20 GFEKLGLKSELLRGIYSYGYEKPSAIQQRAIKPSVEGRDVIAQAQSGTGKTATFAISILQ 79
Query: 107 QTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNEC 166
+ + + ALVL TRELA QI +R +YL +++ GG + L+ +
Sbjct: 80 RIDVSSNTCQALVLVPTRELARQIQTVVQRIGSYL-NVRCHTCIGGTRMSEDVACLQ-QG 137
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
+VVGTPGR++ + L+ N++ F+LDE D+ML ++EI+K P Q+M
Sbjct: 138 QHVVVGTPGRVIDMMNRSILATSNIKIFVLDEADQML-GRGFEPQIKEIYKYLPESAQIM 196
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDA 285
+ SAT+ K++ + + MQDP++I + E +LTL G+ Q YI +S+ E K L DL
Sbjct: 197 LLSATMPKQMLTIARGIMQDPVQILIKKE-ELTLDGIKQFYINVSKEEYKLETLMDLYKV 255
Query: 286 LDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVAT 345
++ +QVVIFV SV +A+ L++ L NF CI+S M QE+R + ++ G RIL++T
Sbjct: 256 MNLSQVVIFVNSVRKASYLSEELANRNFQVSCINSDMEQEKRDRVMEEYRSGRSRILLST 315
Query: 346 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
D++ RGID+++V++V+NYD+P +TY+HR+GR GRFG KG AI F++
Sbjct: 316 DVLARGIDVQQVSLVVNYDLPGDRETYIHRIGRGGRFGRKGTAINFIT 363
>gi|421491577|ref|ZP_15938940.1| DEAD [Morganella morganii subsp. morganii KT]
gi|455737321|ref|YP_007503587.1| Cold-shock DEAD-box protein A [Morganella morganii subsp. morganii
KT]
gi|400194011|gb|EJO27144.1| DEAD [Morganella morganii subsp. morganii KT]
gi|455418884|gb|AGG29214.1| Cold-shock DEAD-box protein A [Morganella morganii subsp. morganii
KT]
Length = 635
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/365 (35%), Positives = 204/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D L ++L A+ D G+E PS +Q +CIP + G DV+ A++G GKTA F L L
Sbjct: 9 FADIGLSADILTALDDLGYEKPSPIQQQCIPHLLAGRDVLGMAQTGSGKTAAFGLPLLNN 68
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+PN LVL TRELA Q+ FS ++ ++ V YGG + L+ + P
Sbjct: 69 IDPNLRAPQILVLAPTRELAVQVAEACTDFSKHMRNVNVVALYGGQRYDVQLRALR-QGP 127
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
Q+VVGTPGR+L + L L N++ +LDE D+ML + DV+ I P + Q +
Sbjct: 128 QVVVGTPGRLLDHLKRGTLDLSNLKGLVLDEADEMLR-MGFIEDVETIMSQIPAEHQTAL 186
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM+DP E+ + T + Q Y K+ L L+A D
Sbjct: 187 FSATMPEAIRRITRRFMKDPQEVRIQTSVT-TRPDISQSYWTAYGARKSEALVRFLEAED 245
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 246 FDAAIIFVRTKNATLEVAETLERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 305
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P A++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 306 AARGLDVERISLVVNYDIPMDAESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 364
Query: 408 MFLLI 412
M L I
Sbjct: 365 MKLTI 369
>gi|334125775|ref|ZP_08499761.1| ATP-dependent RNA helicase DeaD [Enterobacter hormaechei ATCC
49162]
gi|333386537|gb|EGK57750.1| ATP-dependent RNA helicase DeaD [Enterobacter hormaechei ATCC
49162]
Length = 630
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/365 (35%), Positives = 202/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L L
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLSGRDVLGMAQTGSGKTAAFSLPLLNN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P+ LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 IDPDLRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWSVYGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|56756691|gb|AAW26518.1| SJCHGC06278 protein [Schistosoma japonicum]
gi|226468130|emb|CAX76292.1| Eukaryotic initiation factor 4A [Schistosoma japonicum]
gi|226468134|emb|CAX76294.1| Eukaryotic initiation factor 4A [Schistosoma japonicum]
gi|226468136|emb|CAX76295.1| Eukaryotic initiation factor 4A [Schistosoma japonicum]
gi|226468138|emb|CAX76296.1| Eukaryotic initiation factor 4A [Schistosoma japonicum]
gi|226472622|emb|CAX70997.1| Eukaryotic initiation factor 4A [Schistosoma japonicum]
Length = 392
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 144/348 (41%), Positives = 215/348 (61%), Gaps = 5/348 (1%)
Query: 47 GFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQ 106
GF LK ELLR I G+E PS +Q I ++ G DVI QA+SG GKTA F +S LQ
Sbjct: 20 GFEKLGLKSELLRGIYSYGYEKPSAIQQRAIKPSVEGRDVIAQAQSGTGKTATFAISILQ 79
Query: 107 QTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNEC 166
+ + + ALVL TRELA QI +R +YL +++ GG + L+ +
Sbjct: 80 RIDVSSNTCQALVLVPTRELARQIQTVVQRIGSYL-NVRCHTCIGGTRMSEDVACLQ-QG 137
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
+VVGTPGR++ + L+ N++ F+LDE D+ML ++EI+K P Q+M
Sbjct: 138 QHVVVGTPGRVIDMMNRSILATSNIKIFVLDEADQML-GRGFEPQIKEIYKYLPESAQIM 196
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDA 285
+ SAT+ K++ + + MQDP++I + E +LTL G+ Q YI +S+ E K L DL
Sbjct: 197 LLSATMPKQMLTIARGIMQDPVQILIKKE-ELTLDGIKQFYINVSKEEYKLETLMDLYKV 255
Query: 286 LDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVAT 345
++ +QVVIFV SV +A+ L++ L NF CI+S M QE+R + ++ G RIL++T
Sbjct: 256 MNLSQVVIFVNSVRKASYLSEELANRNFQVSCINSDMEQEKRDRVMEEYRSGRSRILLST 315
Query: 346 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
D++ RGID+++V++V+NYD+P +TY+HR+GR GRFG KG AI F++
Sbjct: 316 DVLARGIDVQQVSLVVNYDLPGDRETYIHRIGRGGRFGRKGTAINFIT 363
>gi|417336639|ref|ZP_12119048.1| Cold-shock DEAD-box protein A [Salmonella enterica subsp. enterica
serovar Alachua str. R6-377]
gi|417376072|ref|ZP_12145364.1| Cold-shock DEAD-box protein A [Salmonella enterica subsp. enterica
serovar Inverness str. R8-3668]
gi|417541982|ref|ZP_12193561.1| ATP-dependent RNA helicase DbpA [Salmonella enterica subsp.
enterica serovar Wandsworth str. A4-580]
gi|353567258|gb|EHC32511.1| Cold-shock DEAD-box protein A [Salmonella enterica subsp. enterica
serovar Alachua str. R6-377]
gi|353594393|gb|EHC51918.1| Cold-shock DEAD-box protein A [Salmonella enterica subsp. enterica
serovar Inverness str. R8-3668]
gi|353659637|gb|EHC99472.1| ATP-dependent RNA helicase DbpA [Salmonella enterica subsp.
enterica serovar Wandsworth str. A4-580]
Length = 614
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/365 (35%), Positives = 201/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L L
Sbjct: 8 FADLGLKAPILEALTDLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKTAAFSLPLLNN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|419701996|ref|ZP_14229594.1| ATP-dependent RNA helicase DeaD [Escherichia coli SCI-07]
gi|380346847|gb|EIA35137.1| ATP-dependent RNA helicase DeaD [Escherichia coli SCI-07]
Length = 629
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 202/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L LQ
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|419922584|ref|ZP_14440596.1| ATP-dependent RNA helicase DeaD [Escherichia coli 541-15]
gi|388395985|gb|EIL57119.1| ATP-dependent RNA helicase DeaD [Escherichia coli 541-15]
Length = 629
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 202/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L LQ
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|449678669|ref|XP_002164714.2| PREDICTED: probable ATP-dependent RNA helicase DDX6-like [Hydra
magnipapillata]
Length = 436
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/347 (38%), Positives = 203/347 (58%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D+ LK ELL I + GFE PS +Q + IP A+ G D++ +AK+G GKT +++ L++
Sbjct: 49 FEDYCLKRELLMGIFEKGFEKPSPIQEQSIPIALAGRDIMARAKNGTGKTGAYLIPLLER 108
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NEC 166
+ + ALVL TRELA Q + S +L KV V GG ++K D+++ +
Sbjct: 109 VDSTKDYIQALVLVPTRELALQTSQICKDLSNHL-GTKVMVTLGGTSLK--DDIMRLYQT 165
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
+VV TPGRIL L + + + ++DE DK+L S+D ++ + + +M P ++QV+
Sbjct: 166 VHVVVATPGRILDLMKKGVADMSKCQILVMDEADKLL-SMDFKKLLDSLIQMLPENRQVL 224
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
++SAT ++ K++ P EI + DE LTL G+ Q+Y + E +K LN L L
Sbjct: 225 LYSATFPYSVKEFKDKYLSKPYEINLMDE--LTLKGITQYYAFVEEKQKVHCLNTLFSKL 282
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF SV R L + + + + IHS M Q R + F+ G R LV +D
Sbjct: 283 QVNQSIIFCNSVQRVELLARKITQLGYSCFYIHSRMQQSHRNRVFHDFRSGQCRNLVCSD 342
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L RGIDI+ VN+VIN+D P +++TYLHR+GR+GRFG G+A+ ++
Sbjct: 343 LFTRGIDIQAVNVVINFDFPKNSETYLHRIGRSGRFGHLGIALNLIT 389
>gi|424488952|ref|ZP_17937498.1| cold-shock DEAD-box protein A [Escherichia coli TW09098]
gi|390802493|gb|EIO69529.1| cold-shock DEAD-box protein A [Escherichia coli TW09098]
Length = 629
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 202/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L LQ
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|448097851|ref|XP_004198777.1| Piso0_002166 [Millerozyma farinosa CBS 7064]
gi|359380199|emb|CCE82440.1| Piso0_002166 [Millerozyma farinosa CBS 7064]
Length = 399
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 134/354 (37%), Positives = 212/354 (59%), Gaps = 6/354 (1%)
Query: 41 VGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVF 100
+ IH + F LK ELL+ I GFE PS +Q I Q I G D + QA+SG GKTA F
Sbjct: 22 IKIHRT-FESMKLKRELLKGIYAYGFETPSAIQSRAIMQIITGKDTVAQAQSGTGKTATF 80
Query: 101 VLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKD 160
+ LQ + + AL+L TRELA QI + Y+ +I+ GG +
Sbjct: 81 SIGMLQVIDTKSKECQALILSTTRELAQQIQDVVKNLGDYM-NIQAHACIGGTQVGEDAK 139
Query: 161 LLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTP 220
L+ + QIV GTPGR++ L + ++LS ++++ ILDE D+++ + + ++ EI+++ P
Sbjct: 140 KLQ-QGRQIVSGTPGRVVDLIKRQNLSTRHIKMLILDEADELM-TRGFKENIYEIYRLLP 197
Query: 221 HDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKL 279
+ QV++ SATLS+E+ V KFM DP++I V + ++TL G+ Q++I+ + E K L
Sbjct: 198 SNVQVVVVSATLSREVLEVTSKFMTDPVKILVKRD-EITLEGIKQYHIQCEKEEWKFDTL 256
Query: 280 NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNK 339
DL D+L Q VIF + + L + F +H M Q+ER + F+ G+
Sbjct: 257 CDLYDSLTITQAVIFCNTKVKVNWLAHQMKTAGFAVDLMHGDMKQDERDSVMNNFRSGSS 316
Query: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
R+L++TD+ RGID+++V++VINYD+P + + Y+HR+GR+GRFG KG AI+ ++
Sbjct: 317 RVLISTDVWARGIDVQQVSLVINYDLPLNKENYIHRIGRSGRFGRKGAAISLLT 370
>gi|445258846|ref|ZP_21409615.1| ATP-dependent RNA helicase DeaD, partial [Salmonella enterica
subsp. enterica serovar Enteritidis str. 436]
gi|444888819|gb|ELY12336.1| ATP-dependent RNA helicase DeaD, partial [Salmonella enterica
subsp. enterica serovar Enteritidis str. 436]
Length = 491
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/365 (35%), Positives = 201/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L L
Sbjct: 8 FADLGLKAPILEALTDLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKTAAFSLPLLNN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|367024941|ref|XP_003661755.1| hypothetical protein MYCTH_2314668 [Myceliophthora thermophila ATCC
42464]
gi|347009023|gb|AEO56510.1| hypothetical protein MYCTH_2314668 [Myceliophthora thermophila ATCC
42464]
Length = 401
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 140/356 (39%), Positives = 207/356 (58%), Gaps = 8/356 (2%)
Query: 41 VGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVF 100
V +H + F LK LLR I G+E PS VQ I Q G D I QA+SG GKTA F
Sbjct: 23 VTVHPT-FESMSLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATF 81
Query: 101 VLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKD 160
+S LQ + + ALVL TRELA QI Y+ +++ GG N+ +D
Sbjct: 82 AISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVG--ED 138
Query: 161 LLKNECPQ-IVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
+ K + Q IV GTPGR+ + R + L ++++ +LDE D++L R + ++++
Sbjct: 139 IRKLDYGQHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNQ-GFREQIYDVYRYL 197
Query: 220 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL-SELEKNRK 278
P QV++ SATL ++ + KFM DP+ I V + +LTL GL Q++I + E K
Sbjct: 198 PPATQVVVVSATLPYDVLDMTTKFMTDPVRILVKRD-ELTLEGLKQYFIAVEKEDWKFDT 256
Query: 279 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGN 338
L DL D L Q VIF + + L + E NF +H M Q+ER + + F++GN
Sbjct: 257 LCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDMPQKERDSIMQDFRQGN 316
Query: 339 KRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSS 394
R+L++TD+ RGID+++V++VINYD+P + + Y+HR+GR+GRFG KG+AI FV+S
Sbjct: 317 SRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTS 372
>gi|193067315|ref|ZP_03048283.1| cold-shock DEAD box protein A [Escherichia coli E110019]
gi|192959272|gb|EDV89707.1| cold-shock DEAD box protein A [Escherichia coli E110019]
Length = 629
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 202/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L LQ
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|261820134|ref|YP_003258240.1| ATP-dependent RNA helicase DeaD [Pectobacterium wasabiae WPP163]
gi|261604147|gb|ACX86633.1| DEAD/DEAH box helicase domain protein [Pectobacterium wasabiae
WPP163]
gi|385870319|gb|AFI88839.1| Cold-shock DEAD box protein A [Pectobacterium sp. SCC3193]
Length = 632
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/368 (35%), Positives = 201/368 (54%), Gaps = 4/368 (1%)
Query: 45 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLST 104
S+ F D L ++ A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L
Sbjct: 5 STSFSDLGLSAPIINALTDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFALPL 64
Query: 105 LQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKN 164
L +P LVL TRELA Q+ F+ ++ + V YGG + L+
Sbjct: 65 LNNLKPELKAPQMLVLAPTRELAVQVAEACNDFAKHMHGVNVVALYGGQRYDVQLRALRG 124
Query: 165 ECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQ 224
QIVVGTPGR+L + L L N+ +LDE D+ML + DV+ I P Q
Sbjct: 125 GA-QIVVGTPGRLLDHLKRGTLDLSNLSGLVLDEADEMLR-MGFIEDVENIMAQIPATHQ 182
Query: 225 VMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLD 284
+FSAT+ + IR + ++FM+DP E+ + T + Q Y + + KN L L+
Sbjct: 183 TALFSATMPEAIRRITRRFMKDPQEVRIQSSVT-TRPDISQSYWTVQGMRKNEALVRFLE 241
Query: 285 ALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVA 344
A DF+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+A
Sbjct: 242 AEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILIA 301
Query: 345 TDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 404
TD+ RG+D+ER+++V+NYD+P A++Y+HR+GR GR G G A+ FV + + +L V
Sbjct: 302 TDVAARGLDVERISLVVNYDIPMDAESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNV 360
Query: 405 SKFMFLLI 412
+ M L I
Sbjct: 361 ERTMKLTI 368
>gi|207858530|ref|YP_002245181.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|421360862|ref|ZP_15811138.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 622731-39]
gi|421361114|ref|ZP_15811380.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639016-6]
gi|421369959|ref|ZP_15820134.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 640631]
gi|421374403|ref|ZP_15824534.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-0424]
gi|421378660|ref|ZP_15828739.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-6]
gi|421379652|ref|ZP_15829719.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 485549-17]
gi|421384683|ref|ZP_15834706.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-22]
gi|421389675|ref|ZP_15839658.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-70]
gi|421396961|ref|ZP_15846886.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-26]
gi|421397819|ref|ZP_15847729.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-37]
gi|421405772|ref|ZP_15855597.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-46]
gi|421408702|ref|ZP_15858501.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-50]
gi|421411335|ref|ZP_15861101.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-1427]
gi|421417730|ref|ZP_15867440.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-2659]
gi|421421194|ref|ZP_15870863.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 78-1757]
gi|421427425|ref|ZP_15877045.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22510-1]
gi|421431196|ref|ZP_15880782.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 8b-1]
gi|421437254|ref|ZP_15886775.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648905 5-18]
gi|421441518|ref|ZP_15890987.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 6-18]
gi|421442827|ref|ZP_15892272.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-3079]
gi|421447640|ref|ZP_15897037.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 58-6482]
gi|436633363|ref|ZP_20515633.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22704]
gi|436668327|ref|ZP_20517402.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE30663]
gi|436793837|ref|ZP_20521880.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS44]
gi|436832327|ref|ZP_20536617.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1594]
gi|436848113|ref|ZP_20539930.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1566]
gi|436860886|ref|ZP_20548070.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1580]
gi|436867886|ref|ZP_20553040.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1543]
gi|436869582|ref|ZP_20553723.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1441]
gi|436877274|ref|ZP_20558399.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1810]
gi|436891856|ref|ZP_20566556.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1558]
gi|436899238|ref|ZP_20570649.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1018]
gi|436902749|ref|ZP_20573213.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1010]
gi|436915168|ref|ZP_20580015.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1729]
gi|436932031|ref|ZP_20589380.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1457]
gi|436946211|ref|ZP_20598039.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1747]
gi|436966406|ref|ZP_20607075.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1444]
gi|436970373|ref|ZP_20608903.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1445]
gi|436979845|ref|ZP_20612990.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1559]
gi|436993746|ref|ZP_20618539.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1565]
gi|437009386|ref|ZP_20623763.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1808]
gi|437022527|ref|ZP_20628476.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1811]
gi|437042749|ref|ZP_20636262.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1455]
gi|437050424|ref|ZP_20640569.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1575]
gi|437061656|ref|ZP_20647022.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1725]
gi|437066572|ref|ZP_20649634.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1745]
gi|437072686|ref|ZP_20652603.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1791]
gi|437083287|ref|ZP_20659030.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1795]
gi|437098029|ref|ZP_20665484.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 576709]
gi|437102354|ref|ZP_20666488.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 635290-58]
gi|437118100|ref|ZP_20670163.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-16]
gi|437129772|ref|ZP_20676248.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-19]
gi|437141517|ref|ZP_20683201.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-2]
gi|437146401|ref|ZP_20686190.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-9]
gi|437153587|ref|ZP_20690693.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629163]
gi|437158224|ref|ZP_20693146.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE15-1]
gi|437169072|ref|ZP_20699465.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_N202]
gi|437178542|ref|ZP_20704712.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_56-3991]
gi|437181423|ref|ZP_20706537.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_76-3618]
gi|437221274|ref|ZP_20713016.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13183-1]
gi|437260160|ref|ZP_20717560.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_81-2490]
gi|437272299|ref|ZP_20724185.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL909]
gi|437281482|ref|ZP_20728616.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL913]
gi|437296764|ref|ZP_20732565.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_69-4941]
gi|437316108|ref|ZP_20737796.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 638970-15]
gi|437326514|ref|ZP_20740276.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 17927]
gi|437342009|ref|ZP_20745132.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS4]
gi|437365370|ref|ZP_20748708.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22558]
gi|437417767|ref|ZP_20754186.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 22-17]
gi|437446008|ref|ZP_20758730.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 40-18]
gi|437463613|ref|ZP_20763295.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 1-1]
gi|437480824|ref|ZP_20768529.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 4-1]
gi|437495484|ref|ZP_20772760.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642046 4-7]
gi|437504788|ref|ZP_20775270.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648898 4-5]
gi|437538208|ref|ZP_20781907.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648899 3-17]
gi|437567336|ref|ZP_20787607.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648900 1-16]
gi|437580732|ref|ZP_20792135.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 1-17]
gi|437588107|ref|ZP_20793747.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 39-2]
gi|437604844|ref|ZP_20799023.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648902 6-8]
gi|437619588|ref|ZP_20803740.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648903 1-6]
gi|437633843|ref|ZP_20806813.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648904 3-6]
gi|437665617|ref|ZP_20814768.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 653049 13-19]
gi|437683941|ref|ZP_20818874.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 8-1]
gi|437700172|ref|ZP_20823759.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 9-7]
gi|437715692|ref|ZP_20828039.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 42-20]
gi|437732973|ref|ZP_20831976.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 16-16]
gi|437748560|ref|ZP_20833732.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 76-2651]
gi|437804368|ref|ZP_20838922.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 33944]
gi|437991267|ref|ZP_20853787.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-5646]
gi|438084928|ref|ZP_20858499.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 81-2625]
gi|438100179|ref|ZP_20863820.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 62-1976]
gi|438114813|ref|ZP_20870319.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 53-407]
gi|438145442|ref|ZP_20875840.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Pullorum str. ATCC 9120]
gi|445176352|ref|ZP_21397595.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE8a]
gi|445226816|ref|ZP_21404063.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE10]
gi|445329586|ref|ZP_21413539.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 18569]
gi|445344964|ref|ZP_21417929.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13-1]
gi|445356903|ref|ZP_21421921.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. PT23]
gi|206710333|emb|CAR34691.1| ATP-dependent RNA helicase (dead-box protein) [Salmonella enterica
subsp. enterica serovar Enteritidis str. P125109]
gi|395981429|gb|EJH90651.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 622731-39]
gi|395982082|gb|EJH91303.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 640631]
gi|395993841|gb|EJI02931.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639016-6]
gi|395994527|gb|EJI03603.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-0424]
gi|395994995|gb|EJI04060.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-6]
gi|396005827|gb|EJI14799.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 485549-17]
gi|396009415|gb|EJI18348.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-26]
gi|396017234|gb|EJI26100.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-70]
gi|396018315|gb|EJI27177.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-22]
gi|396022000|gb|EJI30814.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-46]
gi|396028117|gb|EJI36879.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-50]
gi|396032629|gb|EJI41348.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-37]
gi|396042565|gb|EJI51187.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-2659]
gi|396042836|gb|EJI51456.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 78-1757]
gi|396046361|gb|EJI54949.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-1427]
gi|396050402|gb|EJI58927.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648905 5-18]
gi|396051780|gb|EJI60295.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22510-1]
gi|396055022|gb|EJI63514.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 8b-1]
gi|396063675|gb|EJI72064.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 6-18]
gi|396071884|gb|EJI80200.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-3079]
gi|396074534|gb|EJI82822.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 58-6482]
gi|434938825|gb|ELL45730.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Pullorum str. ATCC 9120]
gi|434959501|gb|ELL52948.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22704]
gi|434963050|gb|ELL56186.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS44]
gi|434980926|gb|ELL72813.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1594]
gi|434985330|gb|ELL77017.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1580]
gi|434990989|gb|ELL82517.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1566]
gi|434993038|gb|ELL84477.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1543]
gi|435002722|gb|ELL93773.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1441]
gi|435005985|gb|ELL96905.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1558]
gi|435008775|gb|ELL99586.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1810]
gi|435012373|gb|ELM03048.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1018]
gi|435014127|gb|ELM04719.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE30663]
gi|435019179|gb|ELM09623.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1010]
gi|435023250|gb|ELM13546.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1729]
gi|435035783|gb|ELM25628.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1747]
gi|435044544|gb|ELM34227.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1457]
gi|435046816|gb|ELM36431.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1444]
gi|435058176|gb|ELM47531.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1445]
gi|435065423|gb|ELM54529.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1565]
gi|435067210|gb|ELM56271.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1808]
gi|435068401|gb|ELM57429.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1559]
gi|435076464|gb|ELM65247.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1811]
gi|435083399|gb|ELM72000.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1455]
gi|435088140|gb|ELM76597.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1725]
gi|435093128|gb|ELM81468.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1575]
gi|435097378|gb|ELM85637.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1745]
gi|435106673|gb|ELM94690.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 576709]
gi|435108860|gb|ELM96825.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1795]
gi|435110216|gb|ELM98149.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1791]
gi|435122979|gb|ELN10483.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 635290-58]
gi|435126992|gb|ELN14386.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-19]
gi|435127685|gb|ELN15045.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-2]
gi|435133677|gb|ELN20835.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-16]
gi|435136646|gb|ELN23736.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-9]
gi|435141338|gb|ELN28280.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629163]
gi|435148800|gb|ELN35514.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_N202]
gi|435152009|gb|ELN38640.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE15-1]
gi|435152867|gb|ELN39489.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_56-3991]
gi|435164811|gb|ELN50883.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_81-2490]
gi|435166383|gb|ELN52366.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_76-3618]
gi|435169010|gb|ELN54820.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL909]
gi|435169245|gb|ELN55044.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL913]
gi|435179191|gb|ELN64341.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_69-4941]
gi|435180584|gb|ELN65692.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 638970-15]
gi|435192441|gb|ELN76972.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 17927]
gi|435193675|gb|ELN78154.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS4]
gi|435200709|gb|ELN84680.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13183-1]
gi|435202402|gb|ELN86256.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 22-17]
gi|435208328|gb|ELN91743.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22558]
gi|435210397|gb|ELN93668.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 40-18]
gi|435218000|gb|ELO00407.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 4-1]
gi|435218890|gb|ELO01291.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 1-1]
gi|435226831|gb|ELO08384.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642046 4-7]
gi|435235076|gb|ELO15929.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648900 1-16]
gi|435235874|gb|ELO16656.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648898 4-5]
gi|435239054|gb|ELO19662.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648899 3-17]
gi|435240983|gb|ELO21373.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 1-17]
gi|435256787|gb|ELO36081.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648902 6-8]
gi|435258252|gb|ELO37519.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 39-2]
gi|435258868|gb|ELO38128.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648903 1-6]
gi|435265204|gb|ELO44089.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 653049 13-19]
gi|435268378|gb|ELO46966.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 8-1]
gi|435274233|gb|ELO52357.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 9-7]
gi|435281897|gb|ELO59544.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648904 3-6]
gi|435284995|gb|ELO62412.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 42-20]
gi|435287370|gb|ELO64573.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 16-16]
gi|435302966|gb|ELO78893.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 33944]
gi|435311999|gb|ELO86014.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 76-2651]
gi|435319333|gb|ELO92172.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 81-2625]
gi|435325139|gb|ELO97013.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 62-1976]
gi|435328637|gb|ELP00103.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 53-407]
gi|435336758|gb|ELP06562.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-5646]
gi|444856922|gb|ELX81940.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE8a]
gi|444867442|gb|ELX92128.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE10]
gi|444878936|gb|ELY03048.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 18569]
gi|444879630|gb|ELY03725.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13-1]
gi|444886861|gb|ELY10602.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. PT23]
Length = 629
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/365 (35%), Positives = 201/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L L
Sbjct: 8 FADLGLKAPILEALTDLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKTAAFSLPLLNN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|194433764|ref|ZP_03066039.1| cold-shock DEAD box protein A [Shigella dysenteriae 1012]
gi|417674169|ref|ZP_12323606.1| cold-shock DEAD box protein A [Shigella dysenteriae 155-74]
gi|420349118|ref|ZP_14850499.1| cold-shock DEAD box protein A [Shigella boydii 965-58]
gi|194418027|gb|EDX34121.1| cold-shock DEAD box protein A [Shigella dysenteriae 1012]
gi|332086479|gb|EGI91626.1| cold-shock DEAD box protein A [Shigella dysenteriae 155-74]
gi|391267304|gb|EIQ26241.1| cold-shock DEAD box protein A [Shigella boydii 965-58]
Length = 603
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 202/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L LQ
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|383320415|ref|YP_005381256.1| Superfamily II DNA and RNA helicase [Methanocella conradii HZ254]
gi|379321785|gb|AFD00738.1| Superfamily II DNA and RNA helicase [Methanocella conradii HZ254]
Length = 456
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 128/346 (36%), Positives = 199/346 (57%), Gaps = 4/346 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F++ L L+AI GFE + +Q + IP A+ G DVI QA++G GKTA F + ++
Sbjct: 4 FQELSLSAPTLKAIAAMGFEEATPIQGQAIPAALQGRDVIGQAQTGTGKTAAFGIPMVEA 63
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ + +V+ TRELA Q+ E R + + YGG +IK LK + P
Sbjct: 64 VDIKSEAIQGIVITPTRELAVQVAEELNRIG-HFKGVHALPIYGGQDIKRQVSALKRK-P 121
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
Q++VGTPGR++ + K + L +R +LDE D+ML+ + D++ I K TP +Q ++
Sbjct: 122 QVIVGTPGRLIDHMKRKTVRLGGIRMVVLDEADEMLD-MGFIEDIERILKATPEGRQTLL 180
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ I + +FM+DP+ I + + LT+ G Q Y+++ E +K L LLD
Sbjct: 181 FSATIPAPISKLAARFMKDPVSIGIKSRS-LTVQGTEQAYLEVQERQKFEALCRLLDVQL 239
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
++FV++ R EL + L E + + IH ++Q +R + + F+EG +LVATD+
Sbjct: 240 PALAIVFVRTKRRVDELARALSERGYQAEGIHGDLAQSKRDSVMRSFREGATEVLVATDV 299
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
RG+DI V V N+D+P D Y+HR+GR GR G KG+AITFV+
Sbjct: 300 AARGLDISGVTHVYNFDIPQDPDGYVHRIGRTGRAGKKGIAITFVT 345
>gi|417429164|ref|ZP_12160987.1| Cold-shock DEAD-box protein A [Salmonella enterica subsp. enterica
serovar Mississippi str. A4-633]
gi|353615660|gb|EHC67125.1| Cold-shock DEAD-box protein A [Salmonella enterica subsp. enterica
serovar Mississippi str. A4-633]
Length = 618
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/365 (35%), Positives = 201/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L L
Sbjct: 8 FADLGLKAPILEALTDLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKTAAFSLPLLNN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|224585078|ref|YP_002638877.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|224469606|gb|ACN47436.1| ATP-dependent RNA helicase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 626
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/365 (35%), Positives = 201/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L L
Sbjct: 8 FADLGLKAPILEALTDLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKTAAFSLPLLNN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|429083696|ref|ZP_19146725.1| Cold-shock DEAD-box protein A [Cronobacter condimenti 1330]
gi|426547315|emb|CCJ72766.1| Cold-shock DEAD-box protein A [Cronobacter condimenti 1330]
Length = 637
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/365 (35%), Positives = 203/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L L
Sbjct: 8 FTDLGLKAPILEALNDLGYEKPSPIQAECIPHLLAGRDVLGMAQTGSGKTAAFSLPLLHN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 IDETLRAPQILVLAPTRELAVQVAEAMTDFSKHMHGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L N++ +LDE D+ML + DV+ I P + Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSNLKGLVLDEADEMLR-MGFIEDVETIMAQIPAEHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWSVYGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|417343966|ref|ZP_12124424.1| ATP-dependent RNA helicase DbpA [Salmonella enterica subsp.
enterica serovar Baildon str. R6-199]
gi|357954757|gb|EHJ80812.1| ATP-dependent RNA helicase DbpA [Salmonella enterica subsp.
enterica serovar Baildon str. R6-199]
Length = 575
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/365 (35%), Positives = 201/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L L
Sbjct: 8 FADLGLKAPILEALTDLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKTAAFSLPLLNN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|376284519|ref|YP_005157729.1| ATP-dependent RNA helicase [Corynebacterium diphtheriae 31A]
gi|371578034|gb|AEX41702.1| ATP-dependent RNA helicase [Corynebacterium diphtheriae 31A]
Length = 680
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 138/396 (34%), Positives = 213/396 (53%), Gaps = 6/396 (1%)
Query: 1 MGETRDNEYEDELLDYEEE---DAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPEL 57
+ E++DN DE + D T ++A+K GF L +
Sbjct: 19 LSESQDNSQVDEGTTINNDVVADVDDSRVANTSEATDSAQKEADSAEKDGFESLGLPDAI 78
Query: 58 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA 117
L+A+ GFE PS +Q + IP + G DV+ A++G GKTA F L L + + A
Sbjct: 79 LKAVAKVGFETPSPIQAQTIPVLMQGHDVMGLAQTGTGKTAAFALPILSRIDVKKRHPQA 138
Query: 118 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRI 177
L+L TRELA Q+ F+ F+ +L DI V YGG I L+ QI+VGTPGR+
Sbjct: 139 LILAPTRELALQVADSFQSFADHLGDIHVLPIYGGQAYGIQLSGLRRGA-QIIVGTPGRV 197
Query: 178 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237
+ L + N+R +LDE D+ML ++ + DV+ I + TP DKQV +FSAT+ IR
Sbjct: 198 IDHLEKGSLDISNLRFLVLDEADEML-NMGFQEDVERILEDTPEDKQVALFSATMPNGIR 256
Query: 238 PVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKS 297
+ + +M+DP EI V + + T + Q Y+ ++ K L +L+ +F +++FV++
Sbjct: 257 RLSRDYMKDPHEIQVKSQTR-TNTNITQRYLNVAHRNKLDALTRILEVTEFEAMIMFVRT 315
Query: 298 VSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERV 357
E+ + L F + I+ ++Q +R K+G ILVATD+ RG+D+ER+
Sbjct: 316 KHETEEVAEKLRARGFSAAAINGDIAQAQRERTVDQLKDGRLDILVATDVAARGLDVERI 375
Query: 358 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
V NYD+P+ ++Y+HR+GR GR G G AI FV+
Sbjct: 376 THVFNYDIPNDTESYVHRIGRTGRAGRSGEAILFVT 411
>gi|161506153|ref|YP_001573265.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:- str. RSK2980]
gi|160867500|gb|ABX24123.1| hypothetical protein SARI_04344 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 649
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/373 (35%), Positives = 204/373 (54%), Gaps = 4/373 (1%)
Query: 40 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 99
Y+ + F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA
Sbjct: 17 YMAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKTAA 76
Query: 100 FVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHK 159
F L L +P LVL TRELA Q+ FS ++ + V YGG +
Sbjct: 77 FSLPLLNNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQL 136
Query: 160 DLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
L+ + PQIVVGTPGR+L + L L + +LDE D+ML + DV+ I
Sbjct: 137 RALR-QGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQI 194
Query: 220 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKL 279
P Q +FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L
Sbjct: 195 PEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEAL 253
Query: 280 NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNK 339
L+A DF+ +IFV++ + E+ + L + S ++ M+Q R + K+G
Sbjct: 254 VRFLEAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRL 313
Query: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSD 399
IL+ATD+ RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + +
Sbjct: 314 DILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERR 372
Query: 400 ILNQVSKFMFLLI 412
+L + + M L I
Sbjct: 373 LLRNIERTMKLTI 385
>gi|416266916|ref|ZP_11641754.1| Cold-shock DEAD-box protein A [Shigella dysenteriae CDC 74-1112]
gi|320175526|gb|EFW50622.1| Cold-shock DEAD-box protein A [Shigella dysenteriae CDC 74-1112]
Length = 626
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 202/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L LQ
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|383814865|ref|ZP_09970283.1| ATP-dependent RNA helicase DeaD [Serratia sp. M24T3]
gi|383296357|gb|EIC84673.1| ATP-dependent RNA helicase DeaD [Serratia sp. M24T3]
Length = 648
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 130/367 (35%), Positives = 205/367 (55%), Gaps = 4/367 (1%)
Query: 46 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTL 105
+ F D L ++ A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L L
Sbjct: 7 TSFADLGLSAPIISALTDLGYEKPSPIQAECIPHLLSGRDVLGMAQTGSGKTAAFSLPLL 66
Query: 106 QQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE 165
+ + LVL TRELA Q+ FS ++ + V YGG + L+ +
Sbjct: 67 HNIDASLKAPQILVLAPTRELAVQVAEAMTDFSKHMHGVNVVALYGGQRYDVQLRALR-Q 125
Query: 166 CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQV 225
PQ+VVGTPGR+L + L+L N+ +LDE D+ML + DV+ I P + Q
Sbjct: 126 GPQVVVGTPGRLLDHLKRGTLNLSNLSGLVLDEADEMLR-MGFIEDVETIMAQIPAEHQT 184
Query: 226 MMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDA 285
+FSAT+ + IR + ++FM+DP E+ + + T + Q Y + + KN L L+A
Sbjct: 185 ALFSATMPEAIRRITRRFMKDPQEVRIQ-SSITTRPDISQSYWTVHGMRKNEALVRFLEA 243
Query: 286 LDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVAT 345
DF+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+AT
Sbjct: 244 EDFDAAIIFVRTKNATLEVAEALERSGYSSAALNGDMNQALREQTLERLKDGRLDILIAT 303
Query: 346 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVS 405
D+ RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L V
Sbjct: 304 DVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNVE 362
Query: 406 KFMFLLI 412
+ M L I
Sbjct: 363 RTMKLTI 369
>gi|238896669|ref|YP_002921414.1| ATP-dependent RNA helicase DeaD [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|329997852|ref|ZP_08302922.1| cold-shock DEAD-box protein A [Klebsiella sp. MS 92-3]
gi|419764847|ref|ZP_14291086.1| cold-shock DEAD-box protein A [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|238548996|dbj|BAH65347.1| cold-shock DeaD box ATP-dependent RNA helicase [Klebsiella
pneumoniae subsp. pneumoniae NTUH-K2044]
gi|328538887|gb|EGF64951.1| cold-shock DEAD-box protein A [Klebsiella sp. MS 92-3]
gi|397741975|gb|EJK89194.1| cold-shock DEAD-box protein A [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
Length = 659
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/373 (35%), Positives = 203/373 (54%), Gaps = 4/373 (1%)
Query: 40 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 99
Y+ + F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA
Sbjct: 16 YMAEFETTFADLGLKAPILEALTDLGYEKPSPIQAECIPHLLDGRDVLGMAQTGSGKTAA 75
Query: 100 FVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHK 159
F L L +P LVL TRELA Q+ FS ++ + V YGG +
Sbjct: 76 FSLPLLNNIDPELRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQL 135
Query: 160 DLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
L+ + PQIVVGTPGR+L + L L + +LDE D+ML + DV+ I
Sbjct: 136 RALR-QGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQI 193
Query: 220 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKL 279
P Q +FSAT+ + IR + ++FM++P E+ + T + Q Y + KN L
Sbjct: 194 PEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTAYGMRKNEAL 252
Query: 280 NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNK 339
L+A DF+ +IFV++ + E+ + L + S ++ M+Q R + K+G
Sbjct: 253 VRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRL 312
Query: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSD 399
IL+ATD+ RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + +
Sbjct: 313 DILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERR 371
Query: 400 ILNQVSKFMFLLI 412
+L + + M L I
Sbjct: 372 LLRNIERTMKLTI 384
>gi|162138368|ref|YP_542567.2| ATP-dependent RNA helicase DeaD [Escherichia coli UTI89]
gi|432575365|ref|ZP_19811839.1| cold-shock DEAD box protein A [Escherichia coli KTE55]
gi|431105948|gb|ELE10282.1| cold-shock DEAD box protein A [Escherichia coli KTE55]
Length = 629
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 202/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L LQ
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|436807213|ref|ZP_20527256.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1882]
gi|436818104|ref|ZP_20534737.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1884]
gi|436919867|ref|ZP_20582648.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0895]
gi|436925841|ref|ZP_20586194.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0899]
gi|436955674|ref|ZP_20602549.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0968]
gi|437028604|ref|ZP_20630696.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0956]
gi|434968169|gb|ELL60921.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1882]
gi|434970648|gb|ELL63209.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1884]
gi|435029702|gb|ELM19760.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0895]
gi|435038103|gb|ELM27885.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0899]
gi|435046050|gb|ELM35676.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0968]
gi|435084640|gb|ELM73225.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0956]
Length = 629
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/365 (35%), Positives = 201/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L L
Sbjct: 8 FADLGLKAPILEALTDLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKTAAFSLPLLNN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|417360913|ref|ZP_12134927.1| Cold-shock DEAD-box protein A [Salmonella enterica subsp. enterica
serovar Give str. S5-487]
gi|353585463|gb|EHC45294.1| Cold-shock DEAD-box protein A [Salmonella enterica subsp. enterica
serovar Give str. S5-487]
Length = 614
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/365 (35%), Positives = 201/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L L
Sbjct: 8 FADLGLKAPILEALTDLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKTAAFSLPLLNN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|50425797|ref|XP_461495.1| DEHA2F26598p [Debaryomyces hansenii CBS767]
gi|49657164|emb|CAG89921.1| DEHA2F26598p [Debaryomyces hansenii CBS767]
Length = 474
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 135/335 (40%), Positives = 195/335 (58%), Gaps = 7/335 (2%)
Query: 60 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALV 119
I ++GFE PS VQ E IP A+ G D++ +AK+G GKTA FV+ LQQ P ++ AL+
Sbjct: 2 GIFEAGFEKPSPVQEESIPMALAGRDILARAKNGTGKTASFVIPCLQQARPKVNKIQALI 61
Query: 120 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRIL 178
L TRELA Q +L ++ V GG +++ D+L+ N+ ++VGTPGR+L
Sbjct: 62 LVPTRELALQTSQVVRTLGKHL-GLQCMVTTGGTSLR--DDILRLNDPVHVLVGTPGRVL 118
Query: 179 ALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRP 238
LA K L F++DE DKML S + + +++I P +Q ++FSAT ++
Sbjct: 119 DLASRKVADLSECPLFVMDEADKML-SREFKGIIEQILAFFPTTRQSLLFSATFPLAVKS 177
Query: 239 VCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSV 298
+ + P EI + DE LTL G+ Q Y + E +K LN L L NQ +IF S
Sbjct: 178 FMDQHLTKPYEINLMDE--LTLRGISQFYAFVEEKQKLHCLNTLFSKLQINQAIIFCNST 235
Query: 299 SRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVN 358
+R L K + E + H+ M Q R + F++G R+LV +DL+ RGIDI+ VN
Sbjct: 236 NRVELLAKKITELGYSCYYSHAKMPQHARNKVFHEFRQGKVRVLVCSDLLTRGIDIQAVN 295
Query: 359 IVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
+VIN+D P +A+TYLHR+GR+GRFG GLAI +S
Sbjct: 296 VVINFDFPKTAETYLHRIGRSGRFGHLGLAINLMS 330
>gi|226468132|emb|CAX76293.1| Eukaryotic initiation factor 4A [Schistosoma japonicum]
Length = 392
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 144/348 (41%), Positives = 215/348 (61%), Gaps = 5/348 (1%)
Query: 47 GFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQ 106
GF LK ELLR I G+E PS +Q I ++ G DVI QA+SG GKTA F +S LQ
Sbjct: 20 GFEKLGLKSELLRGIYSYGYEKPSAIQQRAIKPSVEGRDVIAQAQSGTGKTATFAISILQ 79
Query: 107 QTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNEC 166
+ + + ALVL TRELA QI +R +YL +++ GG + L+ +
Sbjct: 80 RIDVSSNTCQALVLVPTRELARQIQTVVQRIGSYL-NVRCHTCIGGTRMSEDVACLQ-QG 137
Query: 167 PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
+VVGTPGR++ + L+ N++ F+LDE D+ML ++EI+K P Q+M
Sbjct: 138 QHVVVGTPGRVIDMMNRSILATSNIKIFVLDEADQML-GRGFEPQIKEIYKYLPESAQIM 196
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDA 285
+ SAT+ K++ + + MQDP++I + E +LTL G+ Q YI +S+ E K L DL
Sbjct: 197 LLSATMPKQMLTIARGIMQDPVQILIKKE-ELTLDGIKQFYINVSKEEYKLETLMDLYKV 255
Query: 286 LDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVAT 345
++ +QVVIFV SV +A+ L++ L NF CI+S M QE+R + ++ G RIL++T
Sbjct: 256 MNLSQVVIFVNSVRKASYLSEELANRNFQVSCINSDMEQEKRDRVMEEYRSGRSRILLST 315
Query: 346 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
D++ RGID+++V++V+NYD+P +TY+HR+GR GRFG KG AI F++
Sbjct: 316 DVLARGIDVQQVSLVVNYDLPGDHETYIHRIGRGGRFGRKGTAINFIT 363
>gi|168463497|ref|ZP_02697414.1| cold-shock DEAD box protein A [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|418759831|ref|ZP_13316008.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|418765958|ref|ZP_13322037.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
gi|418771284|ref|ZP_13327291.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|418773991|ref|ZP_13329964.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|418778064|ref|ZP_13333978.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|418786362|ref|ZP_13342178.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|418802001|ref|ZP_13357633.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
gi|419786785|ref|ZP_14312500.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. Levine 1]
gi|419793161|ref|ZP_14318784.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. Levine 15]
gi|195633290|gb|EDX51704.1| cold-shock DEAD box protein A [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|392617140|gb|EIW99565.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. Levine 15]
gi|392620728|gb|EIX03094.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. Levine 1]
gi|392733812|gb|EIZ91003.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|392738676|gb|EIZ95816.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
gi|392745472|gb|EJA02505.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|392748326|gb|EJA05313.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|392753031|gb|EJA09971.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|392756528|gb|EJA13424.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|392779453|gb|EJA36122.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
Length = 629
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/365 (35%), Positives = 201/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L L
Sbjct: 8 FADLGLKAPILEALTDLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKTAAFSLPLLNN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|156405006|ref|XP_001640523.1| predicted protein [Nematostella vectensis]
gi|156227658|gb|EDO48460.1| predicted protein [Nematostella vectensis]
Length = 407
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 139/357 (38%), Positives = 207/357 (57%), Gaps = 8/357 (2%)
Query: 53 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNP 112
L+ +LLR I GFE PS +Q I + G DVI QA+SG GKTA F +S LQ +
Sbjct: 41 LREDLLRGIYAYGFEKPSAIQQRAIKPILKGRDVIAQAQSGTGKTATFSISVLQAIDTQL 100
Query: 113 GQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQ-IVV 171
+ ALVL TRELA QI Y+ ++ GG NI +D+ K + Q IV
Sbjct: 101 REPQALVLSPTRELANQIQKVVLALGDYM-SVQCHACIGGTNI--GEDIRKLDYGQHIVS 157
Query: 172 GTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSAT 231
GTPGR+ + R ++L ++++ +LDE D+ML + + ++++ P QV++ SAT
Sbjct: 158 GTPGRVFDMIRRRNLRTRSIKMLVLDEADEMLNK-GFKEQIYDVYRYLPPATQVVLLSAT 216
Query: 232 LSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQ 290
L EI + KFM DP+ I V + +LTL G+ Q ++ + E K L DL D L Q
Sbjct: 217 LPHEILEMTSKFMTDPIRILVKRD-ELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQ 275
Query: 291 VVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGR 350
VIF + + L + + E NF +H M Q+ER K F+ G R+L++TD+ R
Sbjct: 276 AVIFCNTKRKVDWLTEKMREANFTVASMHGDMPQKEREAIMKDFRAGQSRVLISTDVWAR 335
Query: 351 GIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
G+D+++V++VINYD+P++ + Y+HR+GR+GRFG KG+AI FV S D IL + ++
Sbjct: 336 GLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKS-DDIRILRDIEQY 391
>gi|354725364|ref|ZP_09039579.1| ATP-dependent RNA helicase DeaD [Enterobacter mori LMG 25706]
Length = 631
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 130/365 (35%), Positives = 202/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L ++ D G+E PS +Q ECIP + G DV+ A++G GKTA F L L
Sbjct: 8 FADLGLKAPILESLNDLGYEKPSPIQAECIPHLLAGRDVLGMAQTGSGKTAAFSLPLLNN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P+ LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 IDPDLRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWSVYGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|194446047|ref|YP_002042538.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|418806487|ref|ZP_13362059.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|418810647|ref|ZP_13366187.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|418818263|ref|ZP_13373742.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|418823331|ref|ZP_13378740.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22425]
gi|418828802|ref|ZP_13383813.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22462]
gi|418831225|ref|ZP_13386183.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|418837489|ref|ZP_13392363.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|418842303|ref|ZP_13397113.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|418847001|ref|ZP_13401766.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19443]
gi|418851461|ref|ZP_13406173.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|418855934|ref|ZP_13410582.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|418857698|ref|ZP_13412323.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19470]
gi|418862827|ref|ZP_13417366.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
gi|418869509|ref|ZP_13423942.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
gi|437818241|ref|ZP_20842894.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. SARB17]
gi|194404710|gb|ACF64932.1| cold-shock DEAD box protein A [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|392781595|gb|EJA38236.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|392783104|gb|EJA39734.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|392786225|gb|EJA42782.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22425]
gi|392786675|gb|EJA43231.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|392788189|gb|EJA44725.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22462]
gi|392799009|gb|EJA55278.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|392800421|gb|EJA56659.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|392806874|gb|EJA62958.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|392809472|gb|EJA65509.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19443]
gi|392817608|gb|EJA73518.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|392820284|gb|EJA76134.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|392834224|gb|EJA89834.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
gi|392834767|gb|EJA90369.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19470]
gi|392835972|gb|EJA91560.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
gi|435307915|gb|ELO82945.1| ATP-dependent RNA helicase DeaD [Salmonella enterica subsp.
enterica serovar Enteritidis str. SARB17]
Length = 629
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 131/365 (35%), Positives = 201/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L L
Sbjct: 8 FADLGLKAPILEALTDLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKTAAFSLPLLNN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|193669397|ref|XP_001951491.1| PREDICTED: eukaryotic initiation factor 4A-III-like [Acyrthosiphon
pisum]
Length = 401
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 141/364 (38%), Positives = 206/364 (56%), Gaps = 8/364 (2%)
Query: 46 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTL 105
+ F + L+ +L+R I GFE PS +Q I I G DVI QA+SG GKTA F ++ L
Sbjct: 28 TTFDNMKLREDLVRGIYSYGFERPSAIQQRAIKPMIKGRDVIAQAQSGTGKTATFSIAML 87
Query: 106 QQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE 165
Q + L L TRELA QI YL +++ GG N+ +DL K +
Sbjct: 88 QSIDSQLRDTQVLCLSPTRELAVQIQKVVLALGDYL-NVQCHACIGGTNL--GEDLRKLD 144
Query: 166 CPQ-IVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQ 224
Q IV GTPGR+ + R K L +N++ +LDE D+ML + + ++++ P Q
Sbjct: 145 FGQHIVSGTPGRVFDMIRRKALRTRNIKTLVLDEADEMLNK-GFKEQIYDVYRFLPPATQ 203
Query: 225 VMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLL 283
V++ SATL EI + KFM DP+ I V + +LTL G+ Q ++ + E K L DL
Sbjct: 204 VILISATLPHEILEMTNKFMTDPIRILVKRD-ELTLEGIKQFFVAVEREEWKFDTLCDLY 262
Query: 284 DALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILV 343
D L Q VIF + + L + + E NF +H M Q+ER K F+ G R+L+
Sbjct: 263 DTLTITQAVIFCSTKRKVDWLTEKMRESNFTVSSMHGDMPQKERDAIMKEFRAGQTRVLI 322
Query: 344 ATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQ 403
TD+ RGID+++V++VINYD+P++ + Y+HR+GR+GRFG KG+AI FV S D IL
Sbjct: 323 TTDIWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKS-DDIRILRD 381
Query: 404 VSKF 407
+ ++
Sbjct: 382 IEQY 385
>gi|417328991|ref|ZP_12113968.1| ATP-dependent RNA helicase DbpA [Salmonella enterica subsp.
enterica serovar Adelaide str. A4-669]
gi|353566246|gb|EHC31779.1| ATP-dependent RNA helicase DbpA [Salmonella enterica subsp.
enterica serovar Adelaide str. A4-669]
Length = 618
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 131/365 (35%), Positives = 201/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L L
Sbjct: 8 FADLGLKAPILEALTDLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKTAAFSLPLLNN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|220929887|ref|YP_002506796.1| DEAD/DEAH box helicase [Clostridium cellulolyticum H10]
gi|220000215|gb|ACL76816.1| DEAD/DEAH box helicase domain protein [Clostridium cellulolyticum
H10]
Length = 565
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 129/345 (37%), Positives = 199/345 (57%), Gaps = 3/345 (0%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F+D L E+ RAIVD GFE + +Q + IP + G D+I QA++G GKT F + +++
Sbjct: 6 FKDLTLSDEVQRAIVDMGFEEATPIQSQSIPYILEGNDLIGQAQTGTGKTCAFGIPAVEK 65
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P + LVL TRELA Q C E Y I++ YGG I LK P
Sbjct: 66 IDPQIDSIQVLVLSPTRELAIQSCEELRNVLKYKDGIRILPVYGGQPIDRQIMALKKR-P 124
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QI++GTPGR++ R + + L++++ +LDE D+ML ++ R D+ I + P D+Q ++
Sbjct: 125 QIIIGTPGRVMDHMRRRTIKLESLKMIVLDEADEML-NMGFREDIDTILEKVPEDRQTIL 183
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ KEI + KK+ ++P+ I + + +LT+ + Q+Y+++ E K L+ L+D D
Sbjct: 184 FSATMPKEILELTKKYQKNPVHIKIAHK-ELTVPSIEQYYLEVKESAKLEVLSRLIDTND 242
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
++F + R EL L F + +H M QE R F++GN IL+ATD+
Sbjct: 243 IKLSLVFCNTKKRVDELTASLQSRGFSAEALHGDMRQEHRDKVMNLFRKGNFDILIATDV 302
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFV 392
RGID++ V V NYD+P+ + Y+HR+GR GR G G A TF+
Sbjct: 303 AARGIDVDDVEAVFNYDLPNDDEYYVHRIGRTGRAGRTGKAFTFI 347
>gi|406866441|gb|EKD19481.1| eukaryotic initiation factor 4A-12 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 399
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 138/349 (39%), Positives = 205/349 (58%), Gaps = 7/349 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F+ LK LLR I G+E PS VQ I Q G D I QA+SG GKTA F +S LQ
Sbjct: 27 FQSMHLKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISMLQV 86
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ + ALVL TRELA QI Y+ +++ GG N+ +D+ K +
Sbjct: 87 IDTAVRETQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVG--EDIRKLDYG 143
Query: 168 Q-IVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
Q IV GTPGR+ + R ++L ++++ +LDE D++L R + ++++ P QV+
Sbjct: 144 QHIVSGTPGRVADMIRRRNLRTRHIKMLVLDEADELLNR-GFREQIYDVYRYLPPATQVV 202
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL-SELEKNRKLNDLLDA 285
+ SATL ++ + KFM DP+ I V + +LTL GL Q++I + E K L DL D
Sbjct: 203 VVSATLPYDVLDMTTKFMTDPVRILVKRD-ELTLEGLKQYFIAVEKEDWKFDTLCDLYDT 261
Query: 286 LDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVAT 345
L Q VIF + + L + E NF +H M Q+ER + + F++GN R+L++T
Sbjct: 262 LTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLIST 321
Query: 346 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSS 394
D+ RGID+++V++VINYD+P + + Y+HR+GR+GRFG KG+AI FV+S
Sbjct: 322 DVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTS 370
>gi|326499824|dbj|BAJ90747.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 518
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 136/347 (39%), Positives = 203/347 (58%), Gaps = 7/347 (2%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D+ LK ELL I + GFE PS +Q E IP A+ G D++ +AK+G GKTA F + L++
Sbjct: 146 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 205
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ + + +++ TRELA Q + +L I+V V GG ++K D+++ P
Sbjct: 206 IDQDRNAIQVVIVVPTRELALQTSQVCKELGKHL-KIQVMVTTGGTSLK--DDIVRLYQP 262
Query: 168 -QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
++VGTPGRIL L + LK+ ++DE DK+L S + + ++++ + P +Q++
Sbjct: 263 VHLLVGTPGRILDLTKKGVCILKDCSMLVMDEADKLL-SPEFQPSIEQLIRYLPASRQIL 321
Query: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL 286
MFSAT ++ K++ P I + DE LTL G+ Q Y + E +K LN L L
Sbjct: 322 MFSATFPVTVKEFKDKYLPKPYVINLMDE--LTLKGITQFYAFVEERQKVHCLNTLFSKL 379
Query: 287 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATD 346
NQ +IF SV+R L K + E + IH+ M Q+ R + F+ G R LV TD
Sbjct: 380 QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTD 439
Query: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
L RGIDI+ VN+VIN+D P S++TYLHRVGR+GRFG GLA+ ++
Sbjct: 440 LFTRGIDIQAVNVVINFDFPKSSETYLHRVGRSGRFGHLGLAVNLIT 486
>gi|406027401|ref|YP_006726233.1| DEAD/DEAH box helicase [Lactobacillus buchneri CD034]
gi|405125890|gb|AFS00651.1| DEAD box ATP-dependent RNA helicase SrmB [Lactobacillus buchneri
CD034]
Length = 506
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 140/360 (38%), Positives = 208/360 (57%), Gaps = 5/360 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F + L LL AI +SGFE + +Q E IP + G DVI QA++G GKTA F L LQ+
Sbjct: 3 FSELGLSDHLLTAINNSGFEEATPIQAETIPMVLKGEDVIGQAQTGTGKTAAFGLPILQK 62
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ + V AL++ TRELA Q E R KV V YGG +I+ + LK P
Sbjct: 63 IDFDNPNVQALIISPTRELAIQTQEEIYRLGKD-EKAKVQVVYGGADIRRQINALKGH-P 120
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGRIL R L L++V+ +LDE D+ML ++ D+++I K TP ++Q ++
Sbjct: 121 QIVVGTPGRILDHIRRHTLKLEHVKTLVLDEADEML-NMGFLDDIEDIIKQTPKERQTLL 179
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ +I+ V +FM+DP ++ + + +LT + Q+Y+++ E EK + D D
Sbjct: 180 FSATMPAQIKRVGVQFMRDPHQVTIKAK-ELTTDLIDQYYVRVKEYEKFDTMTRFFDVQD 238
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
++F ++ R E++K L + + +H ++Q R + FK ILVATD+
Sbjct: 239 PEVTIVFCRTKRRVDEVSKGLQARGYKAAGLHGDLTQARRTQIMQEFKAAKIDILVATDV 298
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RGIDI V V NYD+P D Y+HRVGR GR G G++ITF ++ ++ D L ++ K
Sbjct: 299 AARGIDISGVTHVYNYDIPQDPDGYVHRVGRTGRAGKHGVSITF-ATPNEMDYLREIEKL 357
>gi|154150192|ref|YP_001403810.1| DEAD/DEAH box helicase [Methanoregula boonei 6A8]
gi|153998744|gb|ABS55167.1| DEAD/DEAH box helicase domain protein [Methanoregula boonei 6A8]
Length = 532
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 138/365 (37%), Positives = 207/365 (56%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D L E+ +AI + GFE P+ +Q IP G DV QA++G GKT+ F + ++
Sbjct: 7 FSDLSLSKEIAKAIENMGFEEPTPIQALAIPLIQAGRDVTAQAQTGTGKTSAFGIPVIEN 66
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+ + V +VLC TRELA QI EF YLP I V YGG I+ L N
Sbjct: 67 IDASQRVVQVIVLCPTRELAIQIAEEFSHLLAYLPKISVLPVYGGQPIERQLKALANGV- 125
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
IV+GTPGR++ + + LSL +V +LDE D+ML+ + R D++ I K P +Q ++
Sbjct: 126 HIVIGTPGRVMDHLKRRTLSLDHVSMVVLDEADQMLD-MGFRDDIELILKRVPQKRQTLL 184
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSATL K I + K+F P + V+ + +LT+ + Q YI++ + +K L ++D +D
Sbjct: 185 FSATLPKPIIEISKRFQNRPEFVRVEYQ-ELTVPAIEQSYIEVRDRDKLDSLCRVIDVVD 243
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
+IF + A +L + + + +H M Q +R GF++G IL+ATD+
Sbjct: 244 PQLAIIFCNTKRGAEDLAGRIRARGYRAEELHGDMKQSQRDRVMGGFRKGTIDILIATDV 303
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RGID+E V++VINYD+P D Y+HR+GR GR G G AITFV+S D L ++ K+
Sbjct: 304 AARGIDVEDVDMVINYDVPQDVDYYIHRIGRTGRAGKSGRAITFVTS-RDFTKLREIQKY 362
Query: 408 MFLLI 412
+ + I
Sbjct: 363 IKVQI 367
>gi|365836774|ref|ZP_09378161.1| cold-shock DEAD-box protein A [Hafnia alvei ATCC 51873]
gi|364563456|gb|EHM41265.1| cold-shock DEAD-box protein A [Hafnia alvei ATCC 51873]
Length = 641
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 129/373 (34%), Positives = 208/373 (55%), Gaps = 4/373 (1%)
Query: 40 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 99
Y+ + F D L +++A+ D G+E PS +Q ECIP + G DV+ A++G GKTA
Sbjct: 5 YMAEFETSFADLGLAAPIIQALTDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAA 64
Query: 100 FVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHK 159
F L L +P+ LVL TRELA Q+ F+ ++ + V YGG +
Sbjct: 65 FSLPLLHNIDPSLKAPQVLVLAPTRELAVQVSEAMADFAKHMNGVNVVALYGGQRYDVQL 124
Query: 160 DLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMT 219
L+ + PQIVVGTPGR+L + L+L N+ +LDE D+ML + DV+ I
Sbjct: 125 RALR-QGPQIVVGTPGRLLDHLKRGTLNLSNLSGLVLDEADEMLR-MGFIEDVETIMAQI 182
Query: 220 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKL 279
P Q +FSAT+ + IR + ++FM++P E+ + + T + Q Y + + KN L
Sbjct: 183 PAQHQTALFSATMPEAIRRITRRFMKEPQEVRIQ-SSITTRPDISQSYWTVFGMRKNEAL 241
Query: 280 NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNK 339
L+A DF+ +IFV++ + E+ + L + S ++ M+Q R + K+G
Sbjct: 242 VRFLEAEDFDAAIIFVRTKNATLEVAEALERSGYSSAALNGDMNQALREQTLERLKDGRL 301
Query: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSD 399
IL+ATD+ RG+D++R+++V+NYD+P +++Y+HR+GR GR G G A+ FV + +
Sbjct: 302 DILIATDVAARGLDVDRISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERR 360
Query: 400 ILNQVSKFMFLLI 412
+L + + M L I
Sbjct: 361 LLRNIERIMKLTI 373
>gi|296104876|ref|YP_003615022.1| ATP-dependent RNA helicase DeaD [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295059335|gb|ADF64073.1| ATP-dependent RNA helicase DeaD [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 631
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 131/365 (35%), Positives = 202/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L L
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLSGRDVLGMAQTGSGKTAAFSLPLLNN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P+ LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 IDPDLRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWSVYGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|219888343|gb|ACL54546.1| unknown [Zea mays]
Length = 525
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 141/380 (37%), Positives = 211/380 (55%), Gaps = 13/380 (3%)
Query: 15 DYEEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQH 74
D++ + P + A KG + F D+ LK ELL I + GFE PS +Q
Sbjct: 126 DWKAQLKLPPPDTRYRTEDVTATKG------NEFEDYFLKRELLMGIYEKGFERPSPIQE 179
Query: 75 ECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEF 134
E IP A+ G D++ +AK+G GKTA F + L++ + + ++L TRELA Q
Sbjct: 180 ESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQEKNAIQVVILVPTRELALQTSQVC 239
Query: 135 ERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKNVRH 193
+ +L I+V V GG ++K D+++ P ++VGTPGRIL L + L +
Sbjct: 240 KELGKHL-KIQVMVTTGGTSLK--DDIVRLYQPVHLLVGTPGRILDLTKKGVCILNDCSM 296
Query: 194 FILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVD 253
I+DE DK+L S + + ++++ + P +Q++MFSAT ++ K++ P I +
Sbjct: 297 LIMDEADKLL-SPEFQPSIEQLIRYLPASRQILMFSATFPVTVKEFKDKYLPKPYVINLM 355
Query: 254 DEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNF 313
DE LTL G+ Q Y + E +K LN L L NQ +IF SV+R L K + E +
Sbjct: 356 DE--LTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGY 413
Query: 314 PSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYL 373
IH+ M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+D P +++TYL
Sbjct: 414 SCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYL 473
Query: 374 HRVGRAGRFGTKGLAITFVS 393
HRVGR+GRFG GLA+ ++
Sbjct: 474 HRVGRSGRFGHLGLAVNLIT 493
>gi|419927602|ref|ZP_14445336.1| ATP-dependent RNA helicase DeaD [Escherichia coli 541-1]
gi|388407038|gb|EIL67414.1| ATP-dependent RNA helicase DeaD [Escherichia coli 541-1]
Length = 629
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 202/365 (55%), Gaps = 4/365 (1%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L LQ
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P LVL TRELA Q+ FS ++ + V YGG + L+ + P
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGP 126
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
QIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMGQIPEGHQTAL 185
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A D
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAED 244
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
F+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVSKF 407
RG+D+ER+++V+NYD+P +++Y+HR+GR GR G G A+ FV + + +L + +
Sbjct: 305 AARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN-RERRLLRNIERT 363
Query: 408 MFLLI 412
M L I
Sbjct: 364 MKLTI 368
>gi|383820631|ref|ZP_09975884.1| ATP-dependent rna helicase, dead/deah box family protein
[Mycobacterium phlei RIVM601174]
gi|383334548|gb|EID12986.1| ATP-dependent rna helicase, dead/deah box family protein
[Mycobacterium phlei RIVM601174]
Length = 559
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 126/346 (36%), Positives = 195/346 (56%), Gaps = 3/346 (0%)
Query: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
F D + P +LRAI D G+E PS +Q IP + G DV+ A++G GKTA F + L +
Sbjct: 15 FNDLQIHPSVLRAIADVGYETPSAIQAATIPAMLAGSDVVGLAQTGTGKTAAFAIPLLSK 74
Query: 108 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 167
+P ALVL TRELA Q+ F R+ +LP+I V YGG + LK
Sbjct: 75 IDPKRRDTQALVLAPTRELALQVAEAFGRYGAHLPEINVLPIYGGASYGPQLAGLKRGA- 133
Query: 168 QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
Q+VVGTPGR++ L L ++ + +LDE D+ML ++ +V+ I TP KQV +
Sbjct: 134 QVVVGTPGRVIDHLEKGRLDLSHLDYLVLDEADEML-TMGFAEEVERILAETPEYKQVAL 192
Query: 228 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD 287
FSAT+ I+ + K++ DP+E+ V + T + Q YI+++ K L +L+
Sbjct: 193 FSATMPAAIKKITTKYLHDPVEVTVKSKTA-TAENISQRYIQVAGPRKMDALTRVLEVEQ 251
Query: 288 FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDL 347
+ +++FV++ E+ + L F + I+ + Q +R K+G ILVATD+
Sbjct: 252 GDAMIVFVRTKQATEEVAERLRARGFAAAAINGDIPQAQRERTIAALKDGTIDILVATDV 311
Query: 348 VGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 393
RG+D+ER++ V+NYD+P ++Y+HR+GR GR G G A+ FV+
Sbjct: 312 AARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGQALLFVT 357
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.138 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,324,783,180
Number of Sequences: 23463169
Number of extensions: 261203532
Number of successful extensions: 802256
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 35728
Number of HSP's successfully gapped in prelim test: 5915
Number of HSP's that attempted gapping in prelim test: 676883
Number of HSP's gapped (non-prelim): 50144
length of query: 423
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 278
effective length of database: 8,957,035,862
effective search space: 2490055969636
effective search space used: 2490055969636
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 78 (34.7 bits)