BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014487
(423 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q55BZ4|PCY2_DICDI Ethanolamine-phosphate cytidylyltransferase OS=Dictyostelium
discoideum GN=pctA PE=1 SV=1
Length = 360
Score = 356 bits (913), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 179/361 (49%), Positives = 241/361 (66%), Gaps = 16/361 (4%)
Query: 63 KKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLAL 122
KK +RVY+DGCFDLMH+GHANALRQA+ LGD LVVGV +DEEI NKGPPV++ +ER
Sbjct: 7 KKPIRVYVDGCFDLMHFGHANALRQARELGDILVVGVHTDEEIAKNKGPPVMNEQERYKA 66
Query: 123 VSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRY 182
V KW DEV APY +TE++++ L D+ +HG+D + DG D Y KK G++
Sbjct: 67 VRACKWADEVAEGAPYTLTEEYLDSL----NCDFCVHGEDISVGADGKDVYEGIKKSGKF 122
Query: 183 KQIKRTEGVSSTDIVGRILSSMEDTKACEDHNNASLPRDPLRAI-------QSKDAHLSQ 235
+ IKRTEGVS+T++VGR+L +D N + PL + QS LS
Sbjct: 123 RFIKRTEGVSTTELVGRMLLCTKDHL----QNVSGEQTSPLGGVNPNVLHKQSPYTSLSH 178
Query: 236 FLPTSRRIVQFSNCKGPGPNARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQI 295
FLPT+R+IVQFS + P PN +++Y+DG FDLFH GH E LK+AR LGD+L+VG++ D++
Sbjct: 179 FLPTTRKIVQFSEGRSPKPNDKIIYMDGGFDLFHVGHTEALKQARALGDYLIVGVHDDRV 238
Query: 296 VSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETN 355
V E +GS PIM+LHER LSVL+CRYVDEV+IGAP+ VTKDMI + +I +VVHG
Sbjct: 239 VHEQKGSNFPIMNLHERVLSVLSCRYVDEVVIGAPFSVTKDMIDSLHINVVVHGDDQVVL 298
Query: 356 TPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIANHEAYMKRNAKKAVSEKKYYE 415
P G DPY++ + +GI++ ++ + +T T + +RII N Y RN KK E + E
Sbjct: 299 GP-EGGVDPYKLPRELGIYKEVKHTEGLTATEIVKRIIDNRLQYEARNRKKEAKEINFIE 357
Query: 416 Q 416
Q
Sbjct: 358 Q 358
>sp|Q99447|PCY2_HUMAN Ethanolamine-phosphate cytidylyltransferase OS=Homo sapiens
GN=PCYT2 PE=1 SV=1
Length = 389
Score = 317 bits (813), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 163/368 (44%), Positives = 238/368 (64%), Gaps = 26/368 (7%)
Query: 61 GKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERL 120
G ++ VRV+ DGC+D++HYGH+N LRQA+A+GD L+VGV +DEEI +KGPPV + EER
Sbjct: 18 GGRRAVRVWCDGCYDMVHYGHSNQLRQARAMGDYLIVGVHTDEEIAKHKGPPVFTQEERY 77
Query: 121 ALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVG 180
+V +KWVDEV+ APY T + +++ + D+ +HG+D L DG D Y K+ G
Sbjct: 78 KMVQAIKWVDEVVPAAPYVTTLETLDK----YNCDFCVHGNDITLTVDGRDTYEEVKQAG 133
Query: 181 RYKQIKRTEGVSSTDIVGRIL-------SSMEDTKACEDHNNA--SLP--RDPLRAIQSK 229
RY++ KRT+GVS+TD+VGR+L SS E + ++ ++ P R+P +
Sbjct: 134 RYRECKRTQGVSTTDLVGRMLLVTKAHHSSQEMSSEYREYADSFGKCPGGRNPWTGV--- 190
Query: 230 DAHLSQFLPTSRRIVQFSNCKGPGPNARVVYIDGAFDLFHAGHVEILKKARQLGD--FLL 287
SQFL TS++I+QF++ K P P V+Y+ GAFDLFH GHV+ L+K +L + +++
Sbjct: 191 ----SQFLQTSQKIIQFASGKEPQPGETVIYVAGAFDLFHIGHVDFLEKVHRLAERPYII 246
Query: 288 VGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNICLVV 347
G++ DQ V+ ++G +PIM+LHER+LSVLACRYV EV+IGAP+ VT ++++ F + LV
Sbjct: 247 AGLHFDQEVNHYKGKNYPIMNLHERTLSVLACRYVSEVVIGAPYAVTAELLSHFKVDLVC 306
Query: 348 HGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIANHEAYMKRNAKKA 407
HG P SDPY+ K GIF+ ++S ++TT + QRII N Y RN KK
Sbjct: 307 HGKTE--IIPDRDGSDPYQEPKRRGIFRQIDSGSNLTTDLIVQRIITNRLEYEARNQKKE 364
Query: 408 VSEKKYYE 415
E + E
Sbjct: 365 AKELAFLE 372
>sp|Q922E4|PCY2_MOUSE Ethanolamine-phosphate cytidylyltransferase OS=Mus musculus
GN=Pcyt2 PE=1 SV=1
Length = 404
Score = 313 bits (802), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 166/382 (43%), Positives = 236/382 (61%), Gaps = 30/382 (7%)
Query: 58 KKCGKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSME 117
K G ++ VRV+ DGC+D++HYGH+N LRQA+A+GD L+VGV +DEEI +KGPPV + E
Sbjct: 15 KGPGDQRIVRVWCDGCYDMVHYGHSNQLRQARAMGDYLIVGVHTDEEIAKHKGPPVFTQE 74
Query: 118 ERLALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAK 177
ER +V +KWVDEV+ APY T + +++ H D+ +HG+D L DG D Y K
Sbjct: 75 ERYKMVQAIKWVDEVVPAAPYVTTLETLDK----HNCDFCVHGNDITLTVDGRDTYEEVK 130
Query: 178 KVGRYKQIKRTEGVSSTDIVGRIL-------SSMEDTKACEDHNNA-SLPRDPLRA---- 225
+ GRY++ KRT+GVS+TD+VGR+L SS E + ++ ++ P P A
Sbjct: 131 QAGRYRECKRTQGVSTTDLVGRMLLVTKAHHSSQEMSSEYREYADSFGKPPHPTPAGDTL 190
Query: 226 ----------IQSKDAHLSQFLPTSRRIVQFSNCKGPGPNARVVYIDGAFDLFHAGHVEI 275
QS +SQFL TS++I+QF++ K P P V+Y+ GAFDLFH GHV+
Sbjct: 191 SSEVSSQCPGGQSPWTGVSQFLQTSQKIIQFASGKEPQPGETVIYVAGAFDLFHIGHVDF 250
Query: 276 LKKARQLGD--FLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEV 333
L++ +L +++ G++ DQ V+ ++G +PIM+LHER+LSVLACRYV EV+IGAP+ V
Sbjct: 251 LQEVHKLAKRPYVIAGLHFDQEVNRYKGKNYPIMNLHERTLSVLACRYVSEVVIGAPYSV 310
Query: 334 TKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRII 393
T +++ F + LV HG P SDPY+ K GIF ++S +TT + QRII
Sbjct: 311 TAELLNHFKVDLVCHGKTE--IVPDRDGSDPYQEPKRRGIFYQIDSGSDLTTDLIVQRII 368
Query: 394 ANHEAYMKRNAKKAVSEKKYYE 415
N Y RN KK E + E
Sbjct: 369 KNRLEYEARNQKKEAKELAFLE 390
>sp|O88637|PCY2_RAT Ethanolamine-phosphate cytidylyltransferase OS=Rattus norvegicus
GN=Pcyt2 PE=1 SV=1
Length = 404
Score = 313 bits (801), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 165/377 (43%), Positives = 234/377 (62%), Gaps = 30/377 (7%)
Query: 63 KKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLAL 122
++ VRV+ DGC+D++HYGH+N LRQA+A+GD L+VGV +DEEI +KGPPV + EER +
Sbjct: 20 QRTVRVWCDGCYDMVHYGHSNQLRQARAMGDYLIVGVHTDEEIAKHKGPPVFTQEERYKM 79
Query: 123 VSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRY 182
V +KWVDEV+ APY T + +++ H D+ +HG+D L DG D Y K+ GRY
Sbjct: 80 VQAIKWVDEVVPAAPYVTTLETLDK----HNCDFCVHGNDITLTVDGRDTYEEVKQAGRY 135
Query: 183 KQIKRTEGVSSTDIVGRIL-------SSMEDTKACEDHNNA-SLPRDPLRA--------- 225
++ KRT+GVS+TD+VGR+L SS E + ++ ++ P P A
Sbjct: 136 RECKRTQGVSTTDLVGRMLLVTKAHHSSQEMSSEYREYADSFGKPPHPTPAGDTLSSEVS 195
Query: 226 -----IQSKDAHLSQFLPTSRRIVQFSNCKGPGPNARVVYIDGAFDLFHAGHVEILKKAR 280
QS +SQFL TS++I+QF++ K P P V+Y+ GAFDLFH GHV+ L++
Sbjct: 196 SQCPGGQSPWTGVSQFLQTSQKIIQFASGKEPQPGETVIYVAGAFDLFHIGHVDFLQEVH 255
Query: 281 QLGD--FLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMI 338
+L +++ G++ DQ V+ ++G +PIM+LHER+LSVLACRYV EV+IGAP+ VT +++
Sbjct: 256 KLAKRPYVIAGLHFDQEVNRYKGKNYPIMNLHERTLSVLACRYVSEVVIGAPYSVTAELL 315
Query: 339 TTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIANHEA 398
F + LV HG P SDPYE K GIF ++S +TT + QRII N
Sbjct: 316 NHFKVDLVCHGKTE--IVPDRDGSDPYEEPKRRGIFCQIDSGSDLTTDLIVQRIIKNRLE 373
Query: 399 YMKRNAKKAVSEKKYYE 415
Y RN KK E + E
Sbjct: 374 YEARNQKKEAKELAFLE 390
>sp|Q5EA75|PCY2_BOVIN Ethanolamine-phosphate cytidylyltransferase OS=Bos taurus GN=PCYT2
PE=2 SV=1
Length = 389
Score = 312 bits (800), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 163/366 (44%), Positives = 233/366 (63%), Gaps = 26/366 (7%)
Query: 63 KKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLAL 122
++ VRV+ DGC+D++HYGH+N LRQA+A+GD L+VGV +DEEI +KGPPV + EER +
Sbjct: 20 RRAVRVWCDGCYDMVHYGHSNQLRQARAMGDHLIVGVHTDEEIAKHKGPPVFTQEERYKM 79
Query: 123 VSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRY 182
V +KWVDEV+ APY T + +++ + D+ +HG+D L DG D Y K+ GRY
Sbjct: 80 VQAIKWVDEVVPAAPYVTTLETLDK----YNCDFCVHGNDITLTVDGRDTYEEVKQAGRY 135
Query: 183 KQIKRTEGVSSTDIVGRIL-------SSMEDTKACEDHNNA--SLP--RDPLRAIQSKDA 231
++ KRT+GVS+TD+VGR+L SS E + ++ ++ P R+P +
Sbjct: 136 RECKRTQGVSTTDLVGRMLLVTKAHHSSQEMSSEYREYADSFGKCPGGRNPWTGV----- 190
Query: 232 HLSQFLPTSRRIVQFSNCKGPGPNARVVYIDGAFDLFHAGHVEILKKARQLGD--FLLVG 289
SQFL TS++I+QF++ K P P V+Y+ GAFDLFH GHV+ L+K L + +++ G
Sbjct: 191 --SQFLQTSQKIIQFASGKEPQPGETVIYVAGAFDLFHIGHVDFLEKVYGLAERPYVIAG 248
Query: 290 IYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNICLVVHG 349
++ DQ V+ ++G +PIM+LHER+LSVLACRYV EV+IGAP+ VT +++ F + LV HG
Sbjct: 249 LHFDQEVNHYKGKNYPIMNLHERTLSVLACRYVSEVVIGAPYSVTAELLDHFKVDLVCHG 308
Query: 350 TVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIANHEAYMKRNAKKAVS 409
P SDPYE K GIF ++S +TT + QRII N Y RN KK
Sbjct: 309 KTE--VVPDKDGSDPYEEPKRRGIFCQVDSGNDLTTDLIVQRIIKNRLEYEARNQKKEAK 366
Query: 410 EKKYYE 415
E + E
Sbjct: 367 ELAFQE 372
>sp|Q8SQW6|ECT1_ENCCU Probable ethanolamine-phosphate cytidylyltransferase
OS=Encephalitozoon cuniculi (strain GB-M1) GN=MUQ1 PE=1
SV=1
Length = 322
Score = 215 bits (548), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 124/341 (36%), Positives = 195/341 (57%), Gaps = 28/341 (8%)
Query: 67 RVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGL 126
+V+ DGCFD+ HYGHANALRQ+KALGD L+ GV S I KG PV+ EER +V G
Sbjct: 8 KVWADGCFDMFHYGHANALRQSKALGDYLIAGVHSSLSINQEKGLPVMEDEERYEVVEGC 67
Query: 127 KWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYKQIK 186
++VDEV+ +AP+ +T+ M E+ + + HG+D L G D+Y +++G +++++
Sbjct: 68 RYVDEVVRDAPF-VTQTSM---IKEYGVSIVAHGNDIVLDSSGQDSYCQVRRMGIFREVE 123
Query: 187 RTEGVSSTDIVGRILSSMEDTKACEDHNNASLPRDPLRAIQSKDAHLSQFLPTSRRIVQF 246
RT G+S+T+IVGR++ +++ + D N +D D LS F+ +
Sbjct: 124 RTFGISTTEIVGRMM--LKNRGSWLDGENGESSKDS----GYHDRLLSLFMSS------- 170
Query: 247 SNCKGPGPNARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPI 306
G +VV++DG FDLFHAGHV L+ AR +GD+L+VGI+ D+ E+ SY P+
Sbjct: 171 ---MGREKRGKVVFMDGNFDLFHAGHVASLRIARGMGDYLIVGIHDDETTKEYTRSY-PV 226
Query: 307 MHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYE 366
+ ER L+++ACRYVDE+++ +P+ V + I I +V S+ + G D E
Sbjct: 227 LSTKERMLTLMACRYVDEIVV-SPYLVGSEFIKRHGIDVVAPSFDSKDLSRYDGIKDVVE 285
Query: 367 VAKSMGIFQLLESPKSITTTSVAQRIIANHEAYMKRNAKKA 407
+ + F L + + RII+N++ Y R K+
Sbjct: 286 HSYAENRFNYL------SAEHIVNRIISNYQDYANRQKKRT 320
Score = 75.9 bits (185), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 82/158 (51%), Gaps = 30/158 (18%)
Query: 61 GKKKRVRV-YMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIA-NKGPPVLSMEE 118
G++KR +V +MDG FDL H GH +LR A+ +GD L+VG+ DE + PVLS +E
Sbjct: 172 GREKRGKVVFMDGNFDLFHAGHVASLRIARGMGDYLIVGIHDDETTKEYTRSYPVLSTKE 231
Query: 119 RLALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKK 178
R+ + ++VDE++ +PY + +F+ R H ID + D +K
Sbjct: 232 RMLTLMACRYVDEIVV-SPYLVGSEFIKR----HGIDVVAPSFD-------------SKD 273
Query: 179 VGRYKQIK----------RTEGVSSTDIVGRILSSMED 206
+ RY IK R +S+ IV RI+S+ +D
Sbjct: 274 LSRYDGIKDVVEHSYAENRFNYLSAEHIVNRIISNYQD 311
>sp|Q9UTI6|ECT1_SCHPO Probable ethanolamine-phosphate cytidylyltransferase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC15E1.05c PE=2 SV=1
Length = 365
Score = 186 bits (471), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 100/283 (35%), Positives = 158/283 (55%), Gaps = 38/283 (13%)
Query: 67 RVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGL 126
R+++DGC D HYGH+NA+ QAK LG+ LV+G+ SDEEI NKGPPV+++EER +
Sbjct: 10 RLWLDGCMDFFHYGHSNAILQAKQLGETLVIGIHSDEEITLNKGPPVMTLEERCLSANTC 69
Query: 127 KWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYKQIK 186
KWVDEV+ +APY ++M R + Y++HGDD +G D Y AK +Y ++K
Sbjct: 70 KWVDEVVPSAPYVFDLEWMRR----YGCQYVVHGDDISTDANGDDCYRFAKAADQYLEVK 125
Query: 187 RTEGVSSTDIVGRILSSMEDTKACEDHNNASLPRDPLRAIQSKDAHLSQFLPTSRRIVQF 246
RTEGVS+T+++ R+LSS+ + P+ + S+ L +F S + F
Sbjct: 126 RTEGVSTTELLDRLLSSVP----------LEIYSTPVSVLSSQIDLLRRFATDSDGLTPF 175
Query: 247 S-----NCKGP------------GPNARVVYIDGAFDLFHAGHVEILKKARQL--GDFLL 287
+ N + P P ++YIDG +DLF H+ L+ ++ G ++
Sbjct: 176 TDVFIYNTEKPETLISGTTLLRLNPEKNIIYIDGDWDLFTEKHISALELCTRMFPGIPIM 235
Query: 288 VGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAP 330
GI+ D+ E P+++L ER L++L C+Y+ +++G P
Sbjct: 236 AGIFADEKCFE-----KPMLNLLERILNLLQCKYISSILVGPP 273
Score = 82.4 bits (202), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 81/137 (59%), Gaps = 5/137 (3%)
Query: 259 VYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA 318
+++DG D FH GH + +A+QLG+ L++GI++D+ ++ ++G P+M L ER LS
Sbjct: 11 LWLDGCMDFFHYGHSNAILQAKQLGETLVIGIHSDEEITLNKGP--PVMTLEERCLSANT 68
Query: 319 CRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLE 378
C++VDEV+ AP+ + + + VVHG + +T G D Y AK+ + ++
Sbjct: 69 CKWVDEVVPSAPYVFDLEWMRRYGCQYVVHG--DDISTDANGD-DCYRFAKAADQYLEVK 125
Query: 379 SPKSITTTSVAQRIIAN 395
+ ++TT + R++++
Sbjct: 126 RTEGVSTTELLDRLLSS 142
>sp|P33412|ECT1_YEAST Ethanolamine-phosphate cytidylyltransferase OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ECT1 PE=1
SV=1
Length = 323
Score = 153 bits (387), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/352 (32%), Positives = 169/352 (48%), Gaps = 47/352 (13%)
Query: 67 RVYMDGCFDLMHYGHANALRQAKAL----GDELVVGVVSDEEIIANKGPPVLSMEERLAL 122
+V++DGCFD H+GHA A+ QA+ +L GV +DE+I NKG PV++ ER
Sbjct: 9 KVWIDGCFDFTHHGHAGAILQARRTVSKENGKLFCGVHTDEDIQHNKGTPVMNSSERYEH 68
Query: 123 VSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRY 182
+W EV+ APY +M++ ++ Y++HGDD + +G D Y L K++GR+
Sbjct: 69 TRSNRWCSEVVEAAPYVTDPNWMDK----YQCQYVVHGDDITIDANGEDCYKLVKEMGRF 124
Query: 183 KQIKRTEGVSSTDIVGRILSSMEDTKACEDHNNASLPRDPLRAIQSK-DAHLSQFLPTSR 241
K +KRT GVS+T+I+ RIL+ D+ + Q H F
Sbjct: 125 KVVKRTYGVSTTEIIHRILTKKSLPPTHPDYYPTTQELSFYSVAQDAVSKHCYVFQRDLD 184
Query: 242 RIVQFSNCKGPGPNARVVYIDGAFDLFHAGHVEILKKAR---QLGDFLLVGIYTDQIVSE 298
++ K + VY+DG FDLFH G ++ L+K + L+VGI T S
Sbjct: 185 NVLVNGGYKFDAEDC--VYVDGDFDLFHMGDIDQLRKLKMDLHPDKKLIVGITTSDYSS- 241
Query: 299 HRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNICLVVH-GTVSETNTP 357
IM + ER LSVL+C+YVD VII A ++ +N C H GT
Sbjct: 242 ------TIMTMKERVLSVLSCKYVDAVIIDAD----ATSMSQYN-CEKYHIGTA------ 284
Query: 358 LTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIANHEAYMKRNAKKAVS 409
V + G F + +T + +R+ + E Y+ RN KK +S
Sbjct: 285 ---------VLTAAGKFS-----EYLTKELIVKRVESQREVYIARNQKKGMS 322
>sp|O74975|PCY1_SCHPO Probable choline-phosphate cytidylyltransferase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPCC1827.02c PE=1 SV=3
Length = 362
Score = 115 bits (287), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 62/138 (44%), Positives = 84/138 (60%), Gaps = 6/138 (4%)
Query: 66 VRVYMDGCFDLMHYGHANALRQAKAL--GDELVVGVVSDEEIIANKGPPVLSMEERLALV 123
VRVY DG FDL H GH L QAK + L+VG+ +D+ KG V++ +ER +
Sbjct: 102 VRVYADGVFDLFHIGHMRQLEQAKKVFPNVHLIVGLPNDQLTHRLKGLTVMNDKERAEAL 161
Query: 124 SGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYK 183
KWVDEV+ NAP+ IT +F+ EHKID++ H D P D D Y KKVG++
Sbjct: 162 RHCKWVDEVLENAPWVITPEFLE----EHKIDFVAHDDIPYASDDSGDIYLPVKKVGKFI 217
Query: 184 QIKRTEGVSSTDIVGRIL 201
KRTEGVS++D++ RI+
Sbjct: 218 PTKRTEGVSTSDLITRII 235
Score = 85.1 bits (209), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 85/156 (54%), Gaps = 7/156 (4%)
Query: 259 VYIDGAFDLFHAGHVEILKKARQL--GDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSV 316
VY DG FDLFH GH+ L++A+++ L+VG+ DQ+ HR +M+ ER+ ++
Sbjct: 104 VYADGVFDLFHIGHMRQLEQAKKVFPNVHLIVGLPNDQLT--HRLKGLTVMNDKERAEAL 161
Query: 317 LACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQL 376
C++VDEV+ APW +T + + I V H + + D Y K +G F
Sbjct: 162 RHCKWVDEVLENAPWVITPEFLEEHKIDFVAHDDIPYAS---DDSGDIYLPVKKVGKFIP 218
Query: 377 LESPKSITTTSVAQRIIANHEAYMKRNAKKAVSEKK 412
+ + ++T+ + RII +++ Y+ RN + V+ K+
Sbjct: 219 TKRTEGVSTSDLITRIIRDYDQYVMRNLARGVNRKE 254
>sp|P49587|PCY1_PLAFK Choline-phosphate cytidylyltransferase OS=Plasmodium falciparum
(isolate K1 / Thailand) GN=CTP PE=2 SV=1
Length = 370
Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 90/163 (55%), Gaps = 24/163 (14%)
Query: 64 KRVRVYMDGCFDLMHYGHANALRQAKALGDE--LVVGVVSDEEIIANKGPPVLSMEERLA 121
K V +Y DG +D++H GH L QAK L + L+VGV SD E KG V ++EER
Sbjct: 90 KNVVIYADGVYDMLHLGHMKQLEQAKKLFENTTLIVGVTSDNETKLFKGQVVQTLEERTE 149
Query: 122 LVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDP------------------ 163
+ ++WVDE+I+ P+ +T +F+ + +KIDY+ H D P
Sbjct: 150 TLKHIRWVDEIISPCPWVVTPEFLEK----YKIDYVAHDDIPYANNQKKKKKKKSKGKSF 205
Query: 164 CLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSSMED 206
+ D YA K+ G++K +RTEGVS+TD++ RIL + ED
Sbjct: 206 SFDEENEDIYAWLKRAGKFKATQRTEGVSTTDLIVRILKNYED 248
Score = 78.6 bits (192), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 87/178 (48%), Gaps = 21/178 (11%)
Query: 250 KGPGPNAR--VVYIDGAFDLFHAGHVEILKKARQL--GDFLLVGIYTDQIVSEHRGSYHP 305
KG N++ V+Y DG +D+ H GH++ L++A++L L+VG+ +D +G
Sbjct: 83 KGSIKNSKNVVIYADGVYDMLHLGHMKQLEQAKKLFENTTLIVGVTSDNETKLFKGQV-- 140
Query: 306 IMHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPLTG----- 360
+ L ER+ ++ R+VDE+I PW VT + + + I V H + N
Sbjct: 141 VQTLEERTETLKHIRWVDEIISPCPWVVTPEFLEKYKIDYVAHDDIPYANNQKKKKKKKS 200
Query: 361 ----------QSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIANHEAYMKRNAKKAV 408
D Y K G F+ + + ++TT + RI+ N+E Y++R+ ++ +
Sbjct: 201 KGKSFSFDEENEDIYAWLKRAGKFKATQRTEGVSTTDLIVRILKNYEDYIERSLQRGI 258
>sp|P49585|PCY1A_HUMAN Choline-phosphate cytidylyltransferase A OS=Homo sapiens GN=PCYT1A
PE=1 SV=2
Length = 367
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 84/141 (59%), Gaps = 6/141 (4%)
Query: 63 KKRVRVYMDGCFDLMHYGHANALRQAKAL--GDELVVGVVSDEEIIANKGPPVLSMEERL 120
++ VRVY DG FDL H GHA AL QAK L L+VGV SDE KG V++ ER
Sbjct: 74 ERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENERY 133
Query: 121 ALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVG 180
V ++VDEV+ NAP+ +T +F+ EH+ID++ H D P D Y K+ G
Sbjct: 134 DAVQHCRYVDEVVRNAPWTLTPEFLA----EHRIDFVAHDDIPYSSAGSDDVYKHIKEAG 189
Query: 181 RYKQIKRTEGVSSTDIVGRIL 201
+ +RTEG+S++DI+ RI+
Sbjct: 190 MFAPTQRTEGISTSDIITRIV 210
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 94/171 (54%), Gaps = 17/171 (9%)
Query: 259 VYIDGAFDLFHAGHVEILKKARQL--GDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSV 316
VY DG FDLFH+GH L +A+ L +L+VG+ +D++ +G +M+ +ER +V
Sbjct: 79 VYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKG--FTVMNENERYDAV 136
Query: 317 LACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQL 376
CRYVDEV+ APW +T + + I V H + ++ G D Y+ K G+F
Sbjct: 137 QHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDIPYSS---AGSDDVYKHIKEAGMFAP 193
Query: 377 LESPKSITTTSVAQRIIANHEAYMKRNAKKA----------VSEKKYYEQK 417
+ + I+T+ + RI+ +++ Y +RN ++ ++EKKY+ Q+
Sbjct: 194 TQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKKYHLQE 244
>sp|P19836|PCY1A_RAT Choline-phosphate cytidylyltransferase A OS=Rattus norvegicus
GN=Pcyt1a PE=1 SV=2
Length = 367
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 84/141 (59%), Gaps = 6/141 (4%)
Query: 63 KKRVRVYMDGCFDLMHYGHANALRQAKAL--GDELVVGVVSDEEIIANKGPPVLSMEERL 120
++ VRVY DG FDL H GHA AL QAK L L+VGV SDE KG V++ ER
Sbjct: 74 ERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENERY 133
Query: 121 ALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVG 180
V ++VDEV+ NAP+ +T +F+ EH+ID++ H D P D Y K+ G
Sbjct: 134 DAVQHCRYVDEVVRNAPWTLTPEFLA----EHRIDFVAHDDIPYSSAGSDDVYKHIKEAG 189
Query: 181 RYKQIKRTEGVSSTDIVGRIL 201
+ +RTEG+S++DI+ RI+
Sbjct: 190 MFAPTQRTEGISTSDIITRIV 210
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 100/189 (52%), Gaps = 18/189 (9%)
Query: 242 RIVQFSNCKG-PGPNARVVYIDGAFDLFHAGHVEILKKARQL--GDFLLVGIYTDQIVSE 298
R+ C+G P VY DG FDLFH+GH L +A+ L +L+VG+ +D++
Sbjct: 61 RVTMEEACRGTPCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHN 120
Query: 299 HRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPL 358
+G +M+ +ER +V CRYVDEV+ APW +T + + I V H + ++
Sbjct: 121 FKG--FTVMNENERYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDIPYSS--- 175
Query: 359 TGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIANHEAYMKRNAKKA----------V 408
G D Y+ K G+F + + I+T+ + RI+ +++ Y +RN ++ +
Sbjct: 176 AGSDDVYKHIKEAGMFAPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFI 235
Query: 409 SEKKYYEQK 417
+EKKY+ Q+
Sbjct: 236 NEKKYHLQE 244
>sp|P49586|PCY1A_MOUSE Choline-phosphate cytidylyltransferase A OS=Mus musculus GN=Pcyt1a
PE=1 SV=1
Length = 367
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 83/141 (58%), Gaps = 6/141 (4%)
Query: 63 KKRVRVYMDGCFDLMHYGHANALRQAKAL--GDELVVGVVSDEEIIANKGPPVLSMEERL 120
++ VRVY DG FDL H GHA AL QAK L L+VGV SDE KG V++ ER
Sbjct: 74 ERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENERY 133
Query: 121 ALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVG 180
V ++VDEV+ NAP+ +T +F+ EH+ID++ H D P D Y K G
Sbjct: 134 DAVQHCRYVDEVVRNAPWTLTPEFLA----EHRIDFVAHDDIPYSSAGSDDVYKHIKDAG 189
Query: 181 RYKQIKRTEGVSSTDIVGRIL 201
+ +RTEG+S++DI+ RI+
Sbjct: 190 MFAPTQRTEGISTSDIITRIV 210
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 100/189 (52%), Gaps = 18/189 (9%)
Query: 242 RIVQFSNCKG-PGPNARVVYIDGAFDLFHAGHVEILKKARQL--GDFLLVGIYTDQIVSE 298
R+ C+G P VY DG FDLFH+GH L +A+ L +L+VG+ +D++
Sbjct: 61 RVTMEEACRGTPCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHN 120
Query: 299 HRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPL 358
+G +M+ +ER +V CRYVDEV+ APW +T + + I V H + ++
Sbjct: 121 FKG--FTVMNENERYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDIPYSS--- 175
Query: 359 TGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIANHEAYMKRNAKKA----------V 408
G D Y+ K G+F + + I+T+ + RI+ +++ Y +RN ++ +
Sbjct: 176 AGSDDVYKHIKDAGMFAPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFI 235
Query: 409 SEKKYYEQK 417
+EKKY+ Q+
Sbjct: 236 NEKKYHLQE 244
>sp|P13259|PCY1_YEAST Choline-phosphate cytidylyltransferase OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=PCT1 PE=1 SV=2
Length = 424
Score = 108 bits (270), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 83/138 (60%), Gaps = 6/138 (4%)
Query: 66 VRVYMDGCFDLMHYGHANALRQAKAL--GDELVVGVVSDEEIIANKGPPVLSMEERLALV 123
+R+Y DG FDL H GH L Q K L+VGV SD+ KG VL+ ++R +
Sbjct: 104 IRIYADGVFDLFHLGHMKQLEQCKKAFPNVTLIVGVPSDKITHKLKGLTVLTDKQRCETL 163
Query: 124 SGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYK 183
+ +WVDEV+ NAP+ +T +F+ EHKIDY+ H D P + D D Y K++G++
Sbjct: 164 THCRWVDEVVPNAPWCVTPEFLL----EHKIDYVAHDDIPYVSADSDDIYKPIKEMGKFL 219
Query: 184 QIKRTEGVSSTDIVGRIL 201
+RT GVS++DI+ +I+
Sbjct: 220 TTQRTNGVSTSDIITKII 237
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 112/238 (47%), Gaps = 22/238 (9%)
Query: 175 LAKKVGRYKQIKRTEGVSSTDIVGRILSSMEDTKACEDHNNASL-PRDPLR---AIQSKD 230
L KK +Q + TE + D +++K +++ + L PR R + K+
Sbjct: 23 LFKKNKNKRQREETEEQDNED--------KDESKNQDENKDTQLTPRKRRRLTKEFEEKE 74
Query: 231 AHLSQFLPTSRRIVQ---FSNCKGPGPNARVVYIDGAFDLFHAGHVEILKKARQL--GDF 285
A + LP R + F P +Y DG FDLFH GH++ L++ ++
Sbjct: 75 ARYTNELPKELRKYRPKGFRFNLPPTDRPIRIYADGVFDLFHLGHMKQLEQCKKAFPNVT 134
Query: 286 LLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNICL 345
L+VG+ +D+I + +G ++ +R ++ CR+VDEV+ APW VT + + I
Sbjct: 135 LIVGVPSDKITHKLKGLT--VLTDKQRCETLTHCRWVDEVVPNAPWCVTPEFLLEHKIDY 192
Query: 346 VVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIANHEAYMKRN 403
V H + + D Y+ K MG F + ++T+ + +II +++ Y+ RN
Sbjct: 193 VAHDDIPYVS---ADSDDIYKPIKEMGKFLTTQRTNGVSTSDIITKIIRDYDKYLMRN 247
>sp|P49584|PCY1A_CRIGR Choline-phosphate cytidylyltransferase A OS=Cricetulus griseus
GN=PCYT1A PE=2 SV=1
Length = 367
Score = 108 bits (270), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 83/141 (58%), Gaps = 6/141 (4%)
Query: 63 KKRVRVYMDGCFDLMHYGHANALRQAKALGDEL--VVGVVSDEEIIANKGPPVLSMEERL 120
++ VRVY DG FDL H GHA AL QAK L +VGV SDE KG V++ ER
Sbjct: 74 ERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYPIVGVCSDELTHNFKGFTVMNENERY 133
Query: 121 ALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVG 180
V ++VDEV+ NAP+ +T +F+ EH+ID++ H D P D Y K+ G
Sbjct: 134 DAVQHCRYVDEVVRNAPWTLTPEFLA----EHRIDFVAHDDIPYSSAGSDDVYKHIKEAG 189
Query: 181 RYKQIKRTEGVSSTDIVGRIL 201
+ +RTEG+S++DI+ RI+
Sbjct: 190 MFAPTQRTEGISTSDIITRIV 210
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 99/189 (52%), Gaps = 18/189 (9%)
Query: 242 RIVQFSNCKG-PGPNARVVYIDGAFDLFHAGHVEILKKARQL--GDFLLVGIYTDQIVSE 298
R+ C+G P VY DG FDLFH+GH L +A+ L + +VG+ +D++
Sbjct: 61 RVTMEEACRGTPCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYPIVGVCSDELTHN 120
Query: 299 HRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPL 358
+G +M+ +ER +V CRYVDEV+ APW +T + + I V H + ++
Sbjct: 121 FKG--FTVMNENERYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDIPYSS--- 175
Query: 359 TGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIANHEAYMKRNAKKA----------V 408
G D Y+ K G+F + + I+T+ + RI+ +++ Y +RN ++ +
Sbjct: 176 AGSDDVYKHIKEAGMFAPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFI 235
Query: 409 SEKKYYEQK 417
+EKKY+ Q+
Sbjct: 236 NEKKYHLQE 244
>sp|Q9QZC4|PCY1B_RAT Choline-phosphate cytidylyltransferase B OS=Rattus norvegicus
GN=Pcyt1b PE=2 SV=1
Length = 369
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 82/138 (59%), Gaps = 6/138 (4%)
Query: 66 VRVYMDGCFDLMHYGHANALRQAKAL--GDELVVGVVSDEEIIANKGPPVLSMEERLALV 123
VRVY DG FDL H GHA AL QAK L L+VGV SD+ KG V++ ER +
Sbjct: 77 VRVYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKGFTVMNEAERYEAL 136
Query: 124 SGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYK 183
++VDEVI +AP+ +T +F+ + HKID++ H D P D Y K+ G +
Sbjct: 137 RHCRYVDEVIRDAPWTLTPEFLEK----HKIDFVAHDDIPYSSAGSDDVYKHIKEAGMFV 192
Query: 184 QIKRTEGVSSTDIVGRIL 201
+RTEG+S++DI+ RI+
Sbjct: 193 PTQRTEGISTSDIITRIV 210
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 87/156 (55%), Gaps = 7/156 (4%)
Query: 259 VYIDGAFDLFHAGHVEILKKARQL--GDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSV 316
VY DG FDLFH+GH L +A+ L +LLVG+ +D + + +G +M+ ER ++
Sbjct: 79 VYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKG--FTVMNEAERYEAL 136
Query: 317 LACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQL 376
CRYVDEVI APW +T + + I V H + ++ G D Y+ K G+F
Sbjct: 137 RHCRYVDEVIRDAPWTLTPEFLEKHKIDFVAHDDIPYSS---AGSDDVYKHIKEAGMFVP 193
Query: 377 LESPKSITTTSVAQRIIANHEAYMKRNAKKAVSEKK 412
+ + I+T+ + RI+ +++ Y +RN ++ + K+
Sbjct: 194 TQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKE 229
>sp|Q811Q9|PCY1B_MOUSE Choline-phosphate cytidylyltransferase B OS=Mus musculus GN=Pcyt1b
PE=1 SV=2
Length = 369
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 82/138 (59%), Gaps = 6/138 (4%)
Query: 66 VRVYMDGCFDLMHYGHANALRQAKAL--GDELVVGVVSDEEIIANKGPPVLSMEERLALV 123
VRVY DG FDL H GHA AL QAK L L+VGV SD+ KG V++ ER +
Sbjct: 77 VRVYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKGFTVMNEAERYEAL 136
Query: 124 SGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYK 183
++VDEVI +AP+ +T +F+ + HKID++ H D P D Y K+ G +
Sbjct: 137 RHCRYVDEVIRDAPWTLTPEFLEK----HKIDFVAHDDIPYSSAGSDDVYKHIKEAGMFV 192
Query: 184 QIKRTEGVSSTDIVGRIL 201
+RTEG+S++DI+ RI+
Sbjct: 193 PTQRTEGISTSDIITRIV 210
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 87/156 (55%), Gaps = 7/156 (4%)
Query: 259 VYIDGAFDLFHAGHVEILKKARQL--GDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSV 316
VY DG FDLFH+GH L +A+ L +LLVG+ +D + + +G +M+ ER ++
Sbjct: 79 VYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKG--FTVMNEAERYEAL 136
Query: 317 LACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQL 376
CRYVDEVI APW +T + + I V H + ++ G D Y+ K G+F
Sbjct: 137 RHCRYVDEVIRDAPWTLTPEFLEKHKIDFVAHDDIPYSS---AGSDDVYKHIKEAGMFVP 193
Query: 377 LESPKSITTTSVAQRIIANHEAYMKRNAKKAVSEKK 412
+ + I+T+ + RI+ +++ Y +RN ++ + K+
Sbjct: 194 TQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKE 229
>sp|Q9Y5K3|PCY1B_HUMAN Choline-phosphate cytidylyltransferase B OS=Homo sapiens GN=PCYT1B
PE=1 SV=1
Length = 369
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 82/138 (59%), Gaps = 6/138 (4%)
Query: 66 VRVYMDGCFDLMHYGHANALRQAKAL--GDELVVGVVSDEEIIANKGPPVLSMEERLALV 123
VRVY DG FDL H GHA AL QAK L L+VGV SD+ KG V++ ER +
Sbjct: 77 VRVYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKGFTVMNEAERYEAL 136
Query: 124 SGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYK 183
++VDEVI +AP+ +T +F+ + HKID++ H D P D Y K+ G +
Sbjct: 137 RHCRYVDEVIRDAPWTLTPEFLEK----HKIDFVAHDDIPYSSAGSDDVYKHIKEAGMFV 192
Query: 184 QIKRTEGVSSTDIVGRIL 201
+RTEG+S++DI+ RI+
Sbjct: 193 PTQRTEGISTSDIITRIV 210
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 87/156 (55%), Gaps = 7/156 (4%)
Query: 259 VYIDGAFDLFHAGHVEILKKARQL--GDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSV 316
VY DG FDLFH+GH L +A+ L +LLVG+ +D + + +G +M+ ER ++
Sbjct: 79 VYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKG--FTVMNEAERYEAL 136
Query: 317 LACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQL 376
CRYVDEVI APW +T + + I V H + ++ G D Y+ K G+F
Sbjct: 137 RHCRYVDEVIRDAPWTLTPEFLEKHKIDFVAHDDIPYSS---AGSDDVYKHIKEAGMFVP 193
Query: 377 LESPKSITTTSVAQRIIANHEAYMKRNAKKAVSEKK 412
+ + I+T+ + RI+ +++ Y +RN ++ + K+
Sbjct: 194 TQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKE 229
>sp|P49583|PCY1_CAEEL Putative choline-phosphate cytidylyltransferase OS=Caenorhabditis
elegans GN=F08C6.2 PE=2 SV=2
Length = 362
Score = 102 bits (254), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 80/138 (57%), Gaps = 6/138 (4%)
Query: 66 VRVYMDGCFDLMHYGHANALRQAKALGDE--LVVGVVSDEEIIANKGPPVLSMEERLALV 123
VR+Y DG +DL H+GHAN LRQ K + L+VGV D + KG V S EER V
Sbjct: 81 VRIYADGIYDLFHHGHANQLRQVKKMFPNVYLIVGVCGDRDTHKYKGRTVTSEEERYDGV 140
Query: 124 SGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYK 183
++VDEV AP+ T +F+ L K+D+I H P + P D Y ++ G +
Sbjct: 141 RHCRYVDEVYREAPWFCTVEFLKNL----KVDFIAHDAIPYVAPGEEDLYEKFRREGMFL 196
Query: 184 QIKRTEGVSSTDIVGRIL 201
+ +RTEGVS++D+V RI+
Sbjct: 197 ETERTEGVSTSDVVCRII 214
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 82/156 (52%), Gaps = 7/156 (4%)
Query: 259 VYIDGAFDLFHAGHVEILKKARQL--GDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSV 316
+Y DG +DLFH GH L++ +++ +L+VG+ D+ +++G + ER V
Sbjct: 83 IYADGIYDLFHHGHANQLRQVKKMFPNVYLIVGVCGDRDTHKYKG--RTVTSEEERYDGV 140
Query: 317 LACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQL 376
CRYVDEV APW T + + + + H + G+ D YE + G+F
Sbjct: 141 RHCRYVDEVYREAPWFCTVEFLKNLKVDFIAHDAIPYV---APGEEDLYEKFRREGMFLE 197
Query: 377 LESPKSITTTSVAQRIIANHEAYMKRNAKKAVSEKK 412
E + ++T+ V RII +++ Y++RN ++ S K+
Sbjct: 198 TERTEGVSTSDVVCRIIRDYDKYVRRNLQRGYSPKE 233
>sp|C6A439|RIBL_THESM FAD synthase OS=Thermococcus sibiricus (strain MM 739 / DSM 12597)
GN=ribL PE=3 SV=1
Length = 148
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 62 KKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKG-PPVLSMEERL 120
KKK++RV G FD++H GH + L+QAK LGDELVV V D+ + KG P+ SM ER
Sbjct: 3 KKKKIRVVTGGVFDILHVGHIHFLKQAKELGDELVVIVAHDKTVEERKGRRPINSMYERA 62
Query: 121 ALVSGLKWVDEVIANAPYAITEQFMNRL 148
++ LK VDEV+ P I+ + + +L
Sbjct: 63 EVLKALKMVDEVVIGEPNCISFEIVKQL 90
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 263 GAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYV 322
G FD+ H GH+ LK+A++LGD L+V + D+ V E +G PI ++ER+ + A + V
Sbjct: 13 GVFDILHVGHIHFLKQAKELGDELVVIVAHDKTVEERKGR-RPINSMYERAEVLKALKMV 71
Query: 323 DEVIIGAPWEVTKDMITTFNICLVVHG 349
DEV+IG P ++ +++ N ++ G
Sbjct: 72 DEVVIGEPNCISFEIVKQLNPDIIALG 98
>sp|A1S3I3|HLDE_SHEAM Bifunctional protein HldE OS=Shewanella amazonensis (strain ATCC
BAA-1098 / SB2B) GN=hldE PE=3 SV=1
Length = 476
Score = 75.5 bits (184), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 86/164 (52%), Gaps = 11/164 (6%)
Query: 41 GIGVFSLPHLWSDCFHKKKCGKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVV 100
GIGV S L K G++ V +GCFD++H GH + L QAKALGD L+V V
Sbjct: 320 GIGVVSEDQLVYALEQAKLRGERV---VMTNGCFDILHAGHVSYLAQAKALGDRLIVAVN 376
Query: 101 SDEEI--IANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYII 158
D+ + + G PV S++ R+A+++GL VD V+ P+ +E R+ D ++
Sbjct: 377 DDDSVRRLKGDGRPVNSVDRRMAVLAGLASVDWVV---PF--SEDTPQRVIARLLPDLLV 431
Query: 159 HGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILS 202
G D + A +A G+ K + +GVS+T I+ I+S
Sbjct: 432 KGGDYKVEDIAGGAEVIANG-GQVKVLGFEDGVSTTAIIQNIMS 474
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 5/140 (3%)
Query: 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSV 316
RVV +G FD+ HAGHV L +A+ LGD L+V + D V +G P+ + +R ++V
Sbjct: 342 RVVMTNGCFDILHAGHVSYLAQAKALGDRLIVAVNDDDSVRRLKGDGRPVNSV-DRRMAV 400
Query: 317 LACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQL 376
LA + ++ + + +I L+V G + G EV + G ++
Sbjct: 401 LAGLASVDWVVPFSEDTPQRVIARLLPDLLVKGGDYKVEDIAGG----AEVIANGGQVKV 456
Query: 377 LESPKSITTTSVAQRIIANH 396
L ++TT++ Q I++ H
Sbjct: 457 LGFEDGVSTTAIIQNIMSRH 476
>sp|Q07Y78|HLDE_SHEFN Bifunctional protein HldE OS=Shewanella frigidimarina (strain NCIMB
400) GN=hldE PE=3 SV=1
Length = 476
Score = 75.1 bits (183), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 76/137 (55%), Gaps = 8/137 (5%)
Query: 68 VYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGP--PVLSMEERLALVSG 125
V +GCFD++H GH + L+QAKALGD L+V V D + KGP PV ++ R+A+++G
Sbjct: 344 VMTNGCFDILHAGHVSYLQQAKALGDRLIVAVNDDSSVTRLKGPGRPVNPVDRRMAVLAG 403
Query: 126 LKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYKQI 185
L VD V+ P+ TE R+ D ++ G D + A +A G+ + +
Sbjct: 404 LASVDWVV---PF--TEDTPQRIITRLLPDSLVKGGDYKVEDIAGGAEVIAAG-GKVEVL 457
Query: 186 KRTEGVSSTDIVGRILS 202
+GVS+T I+ I+S
Sbjct: 458 GFEDGVSTTAIIQNIMS 474
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSV 316
R+V +G FD+ HAGHV L++A+ LGD L+V + D V+ +G P+ + R +
Sbjct: 342 RIVMTNGCFDILHAGHVSYLQQAKALGDRLIVAVNDDSSVTRLKGPGRPVNPVDRRMAVL 401
Query: 317 LACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQL 376
VD V+ P+ T+D L+ V + + + EV + G ++
Sbjct: 402 AGLASVDWVV---PF--TEDTPQRIITRLLPDSLVKGGDYKVEDIAGGAEVIAAGGKVEV 456
Query: 377 LESPKSITTTSVAQRIIAN 395
L ++TT++ Q I++
Sbjct: 457 LGFEDGVSTTAIIQNIMSQ 475
>sp|Q12RC7|HLDE_SHEDO Bifunctional protein HldE OS=Shewanella denitrificans (strain OS217
/ ATCC BAA-1090 / DSM 15013) GN=hldE PE=3 SV=2
Length = 476
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 31 LLGVSTSYFG--GIGVFSLPHLWSDCFHKKKCGKKKRVRVYMDGCFDLMHYGHANALRQA 88
L+G S+ G G GV S L + G++ V +GCFD++H GH + L+QA
Sbjct: 308 LIGALASHQGESGFGVVSEDQLAYAMEQARLRGERV---VMTNGCFDILHAGHVSYLKQA 364
Query: 89 KALGDELVVGVVSDEEI--IANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQFMN 146
KALGD L+V V SD + + G PV ++ R+A+++GL VD V+ P+ E
Sbjct: 365 KALGDRLIVAVNSDASVKRLKGDGRPVNQVDRRMAVLAGLAAVDWVV---PFC--EDTPE 419
Query: 147 RLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILS 202
R+ D ++ G D + A +A G+ + + +GVS+T I+ I++
Sbjct: 420 RIITRLLPDALVKGGDYKVEDIAGGAQVIAAG-GKVEVLGFEDGVSTTSIIQNIMA 474
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 69/141 (48%), Gaps = 7/141 (4%)
Query: 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSV 316
RVV +G FD+ HAGHV LK+A+ LGD L+V + +D V +G P+ + R +
Sbjct: 342 RVVMTNGCFDILHAGHVSYLKQAKALGDRLIVAVNSDASVKRLKGDGRPVNQVDRRMAVL 401
Query: 317 LACRYVDEVIIGAPW-EVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQ 375
VD V+ P+ E T + I T L+ V + + + +V + G +
Sbjct: 402 AGLAAVDWVV---PFCEDTPERIITR---LLPDALVKGGDYKVEDIAGGAQVIAAGGKVE 455
Query: 376 LLESPKSITTTSVAQRIIANH 396
+L ++TTS+ Q I+A
Sbjct: 456 VLGFEDGVSTTSIIQNIMARQ 476
>sp|C5A1S7|RIBL_THEGJ FAD synthase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM
11827 / EJ3) GN=ribL PE=3 SV=1
Length = 151
Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 9/148 (6%)
Query: 62 KKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGP-PVLSMEERL 120
K +++RV + G FD++H GH + L+QAK LGDELVV V DE + NK P+ E+R
Sbjct: 6 KGRKIRVLVGGVFDILHVGHVHFLKQAKELGDELVVIVAHDETVRRNKRRNPINPAEDRA 65
Query: 121 ALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCL----LPDGTDAYALA 176
L+ +++VDEV +P I + + R+ D I G D L + + +
Sbjct: 66 ELLRAIRYVDEVYIGSPGGIDFELVRRI----NPDVIAIGPDQNFNCEKLKEELKRHGIE 121
Query: 177 KKVGRYKQIKRTEGVSSTDIVGRILSSM 204
+V R + +++ +T I+ RI+
Sbjct: 122 AEVIRVPYLYKSDRAKTTKIIRRIVEEF 149
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Query: 251 GPGPNARV-VYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHL 309
GP ++ V + G FD+ H GHV LK+A++LGD L+V + D+ V ++ +PI
Sbjct: 3 GPSKGRKIRVLVGGVFDILHVGHVHFLKQAKELGDELVVIVAHDETVRRNK-RRNPINPA 61
Query: 310 HERSLSVLACRYVDEVIIGAPWEVTKDMITTFN 342
+R+ + A RYVDEV IG+P + +++ N
Sbjct: 62 EDRAELLRAIRYVDEVYIGSPGGIDFELVRRIN 94
>sp|O58466|RIBL_PYRHO FAD synthase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM
12428 / JCM 9974 / NBRC 100139 / OT-3) GN=ribL PE=3 SV=1
Length = 148
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 61 GKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKG-PPVLSMEER 119
G +++RV + G FD++H GH + L+ AK LGDEL+V V DE + KG PP+ E+R
Sbjct: 2 GSDRKIRVVVGGVFDIIHAGHVHFLKMAKELGDELIVIVAHDETVKKRKGRPPINPAEDR 61
Query: 120 LALVSGLKWVDEVIANAPYAITEQFMNRL 148
++ +++VD+V+ P I+ + RL
Sbjct: 62 AEVLKAIRYVDDVVIGKPGEISLDLIKRL 90
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 259 VYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA 318
V + G FD+ HAGHV LK A++LGD L+V + D+ V + +G PI +R+ + A
Sbjct: 9 VVVGGVFDIIHAGHVHFLKMAKELGDELIVIVAHDETVKKRKGR-PPINPAEDRAEVLKA 67
Query: 319 CRYVDEVIIGAPWEVTKDMITTFNICLVVHG 349
RYVD+V+IG P E++ D+I ++ G
Sbjct: 68 IRYVDDVVIGKPGEISLDLIKRLKPDVIALG 98
>sp|Q4ZZ15|HLDE_PSEU2 Bifunctional protein HldE OS=Pseudomonas syringae pv. syringae
(strain B728a) GN=hldE PE=3 SV=1
Length = 474
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 75/140 (53%), Gaps = 9/140 (6%)
Query: 63 KKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGP--PVLSMEERL 120
K+R+ V+ +GCFD++H GH L QA+ALGD L+V V D + KGP P+ S+E R+
Sbjct: 338 KERI-VFTNGCFDILHAGHVTYLEQARALGDRLIVAVNDDASVSRLKGPGRPINSVERRM 396
Query: 121 ALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVG 180
A+++GL VD VI + P E + + + + +G D + D AY G
Sbjct: 397 AVLAGLGAVDWVI-SFPEGTPENLLTHVKPDVLVKGGDYGVDQVVGADIVQAYG-----G 450
Query: 181 RYKQIKRTEGVSSTDIVGRI 200
+ + E S+T IV +I
Sbjct: 451 EVRVLGLVENSSTTAIVEKI 470
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 3/126 (2%)
Query: 224 RAIQSKDAHLSQFLPTSRRIVQFSNCKGPGPNARVVYIDGAFDLFHAGHVEILKKARQLG 283
RAIQ ++ L + ++ + + R+V+ +G FD+ HAGHV L++AR LG
Sbjct: 309 RAIQREEGSERGVLGLEQLLLAVDDARAH--KERIVFTNGCFDILHAGHVTYLEQARALG 366
Query: 284 DFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNI 343
D L+V + D VS +G PI + ER ++VLA + +I P ++++T
Sbjct: 367 DRLIVAVNDDASVSRLKGPGRPINSV-ERRMAVLAGLGAVDWVISFPEGTPENLLTHVKP 425
Query: 344 CLVVHG 349
++V G
Sbjct: 426 DVLVKG 431
>sp|Q5JHT4|RIBL_PYRKO FAD synthase OS=Pyrococcus kodakaraensis (strain ATCC BAA-918 / JCM
12380 / KOD1) GN=ribL PE=3 SV=1
Length = 149
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 62 KKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEI-IANKGPPVLSMEERL 120
K+K++RV + G FD++H GH + L+QAK LGDELVV V DE + + + P+ E+R
Sbjct: 4 KRKKIRVLVGGVFDILHVGHIHFLKQAKELGDELVVIVAHDETVRMQKRREPINPAEDRA 63
Query: 121 ALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCL----LPDGTDAYALA 176
L+ +++VDEV P I + + R+ D I G D L + + +
Sbjct: 64 ELLRAIRYVDEVYIGTPGTIDMELVKRI----DPDVIAIGPDQFFNCEKLKEELRKHGIN 119
Query: 177 KKVGRYKQIKRTEGVSSTDIVGRILSS 203
+V R + +++ ++ I+ RI+ +
Sbjct: 120 AEVIRIPYLYKSDRAKTSKIIQRIVET 146
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 259 VYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA 318
V + G FD+ H GH+ LK+A++LGD L+V + D+ V + PI +R+ + A
Sbjct: 10 VLVGGVFDILHVGHIHFLKQAKELGDELVVIVAHDETVRMQK-RREPINPAEDRAELLRA 68
Query: 319 CRYVDEVIIGAPWEVTKDMITTFN 342
RYVDEV IG P + +++ +
Sbjct: 69 IRYVDEVYIGTPGTIDMELVKRID 92
>sp|Q9UZ37|RIBL_PYRAB FAD synthase OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=ribL PE=3
SV=1
Length = 148
Score = 72.0 bits (175), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 77/142 (54%), Gaps = 9/142 (6%)
Query: 64 KRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKG-PPVLSMEERLAL 122
+R+RV + G FD++H GH + L+ AK LGDEL+V V DE + KG PP+ E+R +
Sbjct: 5 RRIRVVVGGVFDILHVGHIHFLKMAKELGDELIVIVAHDETVKKRKGRPPINPAEDRAEV 64
Query: 123 VSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDP---C-LLPDGTDAYALAKK 178
+ +++VD+V+ P I+ + + +L K D I G D C L + + L +
Sbjct: 65 LRAIRYVDDVVIGEPGEISLELIKKL----KPDVIALGPDQDFDCRTLKEKLRSIGLKVE 120
Query: 179 VGRYKQIKRTEGVSSTDIVGRI 200
V R + + + ++ I+ RI
Sbjct: 121 VIRLPYLYKEDRAKTSKIIKRI 142
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Query: 255 NARV-VYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERS 313
N R+ V + G FD+ H GH+ LK A++LGD L+V + D+ V + +G PI +R+
Sbjct: 4 NRRIRVVVGGVFDILHVGHIHFLKMAKELGDELIVIVAHDETVKKRKGR-PPINPAEDRA 62
Query: 314 LSVLACRYVDEVIIGAPWEVTKDMITTFN 342
+ A RYVD+V+IG P E++ ++I
Sbjct: 63 EVLRAIRYVDDVVIGEPGEISLELIKKLK 91
>sp|Q7MNY3|HLDE_VIBVY Bifunctional protein HldE OS=Vibrio vulnificus (strain YJ016)
GN=hldE PE=3 SV=2
Length = 476
Score = 71.6 bits (174), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 78/147 (53%), Gaps = 13/147 (8%)
Query: 59 KCGKKKRVRVYM-DGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGP--PVLS 115
K + K +V M +GCFD++H GH + L A LGD L+V V +DE + KGP PV
Sbjct: 333 KAAQAKGEKVVMTNGCFDILHAGHVSYLNNAAKLGDRLIVAVNTDESVKRLKGPGRPVNP 392
Query: 116 MEERLALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDD--PCLLPDGTDAY 173
+ R+A+++GL VD V+ P+ +E RL +E D ++ G D P + G +
Sbjct: 393 TDRRMAVLAGLGAVDWVV---PF--SEDTPQRLISEVLPDLLVKGGDYKPEDIAGGKEVI 447
Query: 174 ALAKKVGRYKQIKRTEGVSSTDIVGRI 200
A G K + +G S+T+I+ I
Sbjct: 448 AAG---GEVKVLNFEDGCSTTEIIDAI 471
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 244 VQFSNCKGPGPNARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSY 303
V+ + KG +VV +G FD+ HAGHV L A +LGD L+V + TD+ V +G
Sbjct: 332 VKAAQAKG----EKVVMTNGCFDILHAGHVSYLNNAAKLGDRLIVAVNTDESVKRLKGPG 387
Query: 304 HPIMHLHERSLSVLA 318
P+ + +R ++VLA
Sbjct: 388 RPV-NPTDRRMAVLA 401
>sp|Q8DEH7|HLDE_VIBVU Bifunctional protein HldE OS=Vibrio vulnificus (strain CMCP6)
GN=hldE PE=3 SV=1
Length = 476
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 78/147 (53%), Gaps = 13/147 (8%)
Query: 59 KCGKKKRVRVYM-DGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGP--PVLS 115
K + K +V M +GCFD++H GH + L A LGD L+V V +DE + KGP PV
Sbjct: 333 KAAQAKGEKVVMTNGCFDILHAGHVSYLNNAAKLGDRLIVAVNTDESVKRLKGPGRPVNP 392
Query: 116 MEERLALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDD--PCLLPDGTDAY 173
+ R+A+++GL VD V+ P+ +E RL +E D ++ G D P + G +
Sbjct: 393 TDRRMAVLAGLGAVDWVV---PF--SEDTPQRLISEVLPDLLVKGGDYKPEDIAGGKEVI 447
Query: 174 ALAKKVGRYKQIKRTEGVSSTDIVGRI 200
A G K + +G S+T+I+ I
Sbjct: 448 AAG---GEVKVLNFEDGCSTTEIIDAI 471
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 244 VQFSNCKGPGPNARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSY 303
V+ + KG +VV +G FD+ HAGHV L A +LGD L+V + TD+ V +G
Sbjct: 332 VKAAQAKG----EKVVMTNGCFDILHAGHVSYLNNAAKLGDRLIVAVNTDESVKRLKGPG 387
Query: 304 HPIMHLHERSLSVLA 318
P+ + +R ++VLA
Sbjct: 388 RPV-NPTDRRMAVLA 401
>sp|A4XPU9|HLDE_PSEMY Bifunctional protein HldE OS=Pseudomonas mendocina (strain ymp)
GN=hldE PE=3 SV=1
Length = 473
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 81/164 (49%), Gaps = 19/164 (11%)
Query: 43 GVFSLPHLWSDCFHKKKCGKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSD 102
GV SL L + G+K V+ +GCFD++H GH L QA+A GD L+V + D
Sbjct: 320 GVLSLDQLLIAIEDARAHGEKI---VFTNGCFDILHAGHVTYLEQARAQGDRLIVAINDD 376
Query: 103 EEIIANKGP--PVLSMEERLALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHG 160
+ KGP P+ +++ R+A+++GL VD V++ A E RL + + D ++ G
Sbjct: 377 ASVSRLKGPGRPINAVDRRMAVLAGLGAVDWVVSFA-----EDTPERLLKQVQPDVLVKG 431
Query: 161 D----DPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRI 200
D + D AY G + + E S+T IV +I
Sbjct: 432 GDYGIDQVVGADIVQAYG-----GEVRVLGLVENSSTTAIVEKI 470
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 3/95 (3%)
Query: 224 RAIQSKDAHLSQFLPTSRRIVQFSNCKGPGPNARVVYIDGAFDLFHAGHVEILKKARQLG 283
RA+Q ++ L + ++ + + G ++V+ +G FD+ HAGHV L++AR G
Sbjct: 309 RAVQREEGSERGVLSLDQLLIAIEDARAHG--EKIVFTNGCFDILHAGHVTYLEQARAQG 366
Query: 284 DFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA 318
D L+V I D VS +G PI + +R ++VLA
Sbjct: 367 DRLIVAINDDASVSRLKGPGRPINAV-DRRMAVLA 400
>sp|Q3A526|HLDE_PELCD Bifunctional protein HldE OS=Pelobacter carbinolicus (strain DSM
2380 / Gra Bd 1) GN=hldE PE=3 SV=1
Length = 490
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 79/150 (52%), Gaps = 16/150 (10%)
Query: 62 KKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGP--PVLSMEER 119
++ + V+ +GCFDL+H GH L++A+ LGD LV+G+ SD I KGP P++S +ER
Sbjct: 349 RRGKTVVFTNGCFDLLHVGHVKYLQKARRLGDLLVLGLNSDASIRRLKGPSRPLISEQER 408
Query: 120 LALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDD----PCLLPDGTDAYAL 175
+++ L +D V+ E L + + D ++ G D + D ++Y
Sbjct: 409 AHILAALSCIDYVV-----VFDEDTPLELIDTLRPDILVKGGDYTPETVVGKDLVESYG- 462
Query: 176 AKKVGRYKQIKRTEGVSSTDIVGRILSSME 205
GR + I +G S+T+I+ RIL E
Sbjct: 463 ----GRVELIDLVDGRSTTNIIERILDRYE 488
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 77/145 (53%), Gaps = 15/145 (10%)
Query: 258 VVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERS--LS 315
VV+ +G FDL H GHV+ L+KAR+LGD L++G+ +D + +G P++ ER+ L+
Sbjct: 354 VVFTNGCFDLLHVGHVKYLQKARRLGDLLVLGLNSDASIRRLKGPSRPLISEQERAHILA 413
Query: 316 VLACRYVDEVII---GAPWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMG 372
L+C +D V++ P E +I T ++V G TP T V G
Sbjct: 414 ALSC--IDYVVVFDEDTPLE----LIDTLRPDILVKGG---DYTPETVVGKDL-VESYGG 463
Query: 373 IFQLLESPKSITTTSVAQRIIANHE 397
+L++ +TT++ +RI+ +E
Sbjct: 464 RVELIDLVDGRSTTNIIERILDRYE 488
>sp|A5UCC3|HLDE_HAEIE Bifunctional protein HldE OS=Haemophilus influenzae (strain PittEE)
GN=hldE PE=3 SV=1
Length = 476
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 15/164 (9%)
Query: 41 GIGVFSLPHLWSDCFHKKKCGKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVV 100
G G+ S L K G+K V +GCFD++H GH + L A+ LGD L+V V
Sbjct: 319 GFGIMSEAELKDAVAQAKARGEKI---VMTNGCFDILHPGHISYLENARKLGDRLIVAVN 375
Query: 101 SDEEIIANKGP--PVLSMEERLALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYII 158
SD+ + KG P+ ++E R+A+++GL VD ++ P+ TE RL E D ++
Sbjct: 376 SDDSVKRLKGESRPINNLENRMAVLAGLASVDWLV---PF--TEDTPQRLIGEILPDLLV 430
Query: 159 HGDD--PCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRI 200
G D P + + +A G K + G S+T+++ +I
Sbjct: 431 KGGDYKPEEIAGSKEVWANG---GDVKVLNFENGCSTTNVIEKI 471
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 68/142 (47%), Gaps = 17/142 (11%)
Query: 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSV 316
++V +G FD+ H GH+ L+ AR+LGD L+V + +D V +G PI +L R ++V
Sbjct: 341 KIVMTNGCFDILHPGHISYLENARKLGDRLIVAVNSDDSVKRLKGESRPINNLENR-MAV 399
Query: 317 LACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSM----- 371
LA + ++ + + +I L+V G G P E+A S
Sbjct: 400 LAGLASVDWLVPFTEDTPQRLIGEILPDLLVKG----------GDYKPEEIAGSKEVWAN 449
Query: 372 -GIFQLLESPKSITTTSVAQRI 392
G ++L +TT+V ++I
Sbjct: 450 GGDVKVLNFENGCSTTNVIEKI 471
>sp|Q4QKN8|HLDE_HAEI8 Bifunctional protein HldE OS=Haemophilus influenzae (strain
86-028NP) GN=hldE PE=3 SV=1
Length = 476
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 15/164 (9%)
Query: 41 GIGVFSLPHLWSDCFHKKKCGKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVV 100
G G+ S L K G+K V +GCFD++H GH + L A+ LGD L+V V
Sbjct: 319 GFGIMSEAELKDAVAQAKARGEKI---VMTNGCFDILHPGHISYLENARKLGDRLIVAVN 375
Query: 101 SDEEIIANKGP--PVLSMEERLALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYII 158
SD+ + KG P+ ++E R+A+++GL VD ++ P+ TE RL E D ++
Sbjct: 376 SDDSVKRLKGESRPINNLENRMAVLAGLASVDWLV---PF--TEDTPQRLIGEILPDLLV 430
Query: 159 HGDD--PCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRI 200
G D P + + +A G K + G S+T+++ +I
Sbjct: 431 KGGDYKPEEIAGSKEVWANG---GDVKVLNFENGCSTTNVIEKI 471
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 68/142 (47%), Gaps = 17/142 (11%)
Query: 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSV 316
++V +G FD+ H GH+ L+ AR+LGD L+V + +D V +G PI +L R ++V
Sbjct: 341 KIVMTNGCFDILHPGHISYLENARKLGDRLIVAVNSDDSVKRLKGESRPINNLENR-MAV 399
Query: 317 LACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSM----- 371
LA + ++ + + +I L+V G G P E+A S
Sbjct: 400 LAGLASVDWLVPFTEDTPQRLIGEILPDLLVKG----------GDYKPEEIAGSKEVWAN 449
Query: 372 -GIFQLLESPKSITTTSVAQRI 392
G ++L +TT+V ++I
Sbjct: 450 GGDVKVLNFENGCSTTNVIEKI 471
>sp|O05074|HLDE_HAEIN Bifunctional protein HldE OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=hldE PE=3 SV=1
Length = 476
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 15/164 (9%)
Query: 41 GIGVFSLPHLWSDCFHKKKCGKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVV 100
G G+ S L K G+K V +GCFD++H GH + L A+ LGD L+V V
Sbjct: 319 GFGIMSEAELKDAVAQAKARGEKI---VMTNGCFDILHPGHISYLENARKLGDRLIVAVN 375
Query: 101 SDEEIIANKGP--PVLSMEERLALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYII 158
SD+ + KG P+ ++E R+A+++GL VD ++ P+ TE RL E D ++
Sbjct: 376 SDDSVKRLKGESRPINNLENRMAVLAGLASVDWLV---PF--TEDTPQRLIGEILPDLLV 430
Query: 159 HGDD--PCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRI 200
G D P + + +A G K + G S+T+++ +I
Sbjct: 431 KGGDYKPEEIAGSKEVWANG---GDVKVLNFENGCSTTNVIEKI 471
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 68/142 (47%), Gaps = 17/142 (11%)
Query: 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSV 316
++V +G FD+ H GH+ L+ AR+LGD L+V + +D V +G PI +L R ++V
Sbjct: 341 KIVMTNGCFDILHPGHISYLENARKLGDRLIVAVNSDDSVKRLKGESRPINNLENR-MAV 399
Query: 317 LACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSM----- 371
LA + ++ + + +I L+V G G P E+A S
Sbjct: 400 LAGLASVDWLVPFTEDTPQRLIGEILPDLLVKG----------GDYKPEEIAGSKEVWAN 449
Query: 372 -GIFQLLESPKSITTTSVAQRI 392
G ++L +TT+V ++I
Sbjct: 450 GGDVKVLNFENGCSTTNVIEKI 471
>sp|A4Y9Z9|HLDE_SHEPC Bifunctional protein HldE OS=Shewanella putrefaciens (strain CN-32
/ ATCC BAA-453) GN=hldE PE=3 SV=1
Length = 476
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 86/165 (52%), Gaps = 11/165 (6%)
Query: 41 GIGVFSLPHLWSDCFHKKKCGKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVV 100
G GV S L K G++ V +GCFD++H GH + L+QAKALGD L+V V
Sbjct: 320 GFGVVSEDQLAYALEQAKLRGERV---VMTNGCFDILHAGHVSYLKQAKALGDRLIVAVN 376
Query: 101 SDEEI--IANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYII 158
D + + +G PV ++ R+A+++GL VD V+ P+ +E R+ D ++
Sbjct: 377 DDASVKRLKGEGRPVNQVDRRMAVLAGLASVDWVV---PF--SEDTPQRIIARLLPDLLV 431
Query: 159 HGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSS 203
G D + A +A G+ + + +G+S+T I+ I+++
Sbjct: 432 KGGDYKIEDIAGGAEVIAAG-GQVQVLGFEDGISTTAIIQNIMAN 475
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 5/140 (3%)
Query: 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSV 316
RVV +G FD+ HAGHV LK+A+ LGD L+V + D V +G P+ + +R ++V
Sbjct: 342 RVVMTNGCFDILHAGHVSYLKQAKALGDRLIVAVNDDASVKRLKGEGRPVNQV-DRRMAV 400
Query: 317 LACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQL 376
LA + ++ + + +I L+V G + G EV + G Q+
Sbjct: 401 LAGLASVDWVVPFSEDTPQRIIARLLPDLLVKGGDYKIEDIAGG----AEVIAAGGQVQV 456
Query: 377 LESPKSITTTSVAQRIIANH 396
L I+TT++ Q I+AN
Sbjct: 457 LGFEDGISTTAIIQNIMANQ 476
>sp|A1RGD1|HLDE_SHESW Bifunctional protein HldE OS=Shewanella sp. (strain W3-18-1)
GN=hldE PE=3 SV=1
Length = 476
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 86/165 (52%), Gaps = 11/165 (6%)
Query: 41 GIGVFSLPHLWSDCFHKKKCGKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVV 100
G GV S L K G++ V +GCFD++H GH + L+QAKALGD L+V V
Sbjct: 320 GFGVVSEDQLAYALEQAKLRGERV---VMTNGCFDILHAGHVSYLKQAKALGDRLIVAVN 376
Query: 101 SDEEI--IANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYII 158
D + + +G PV ++ R+A+++GL VD V+ P+ +E R+ D ++
Sbjct: 377 DDASVKRLKGEGRPVNQVDRRMAVLAGLASVDWVV---PF--SEDTPQRIIARLLPDLLV 431
Query: 159 HGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSS 203
G D + A +A G+ + + +G+S+T I+ I+++
Sbjct: 432 KGGDYKIEDIAGGAEVIAAG-GQVQVLGFEDGISTTAIIQNIMAN 475
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 5/140 (3%)
Query: 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSV 316
RVV +G FD+ HAGHV LK+A+ LGD L+V + D V +G P+ + +R ++V
Sbjct: 342 RVVMTNGCFDILHAGHVSYLKQAKALGDRLIVAVNDDASVKRLKGEGRPVNQV-DRRMAV 400
Query: 317 LACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQL 376
LA + ++ + + +I L+V G + G EV + G Q+
Sbjct: 401 LAGLASVDWVVPFSEDTPQRIIARLLPDLLVKGGDYKIEDIAGG----AEVIAAGGQVQV 456
Query: 377 LESPKSITTTSVAQRIIANH 396
L I+TT++ Q I+AN
Sbjct: 457 LGFEDGISTTAIIQNIMANQ 476
>sp|A6VDB5|HLDE_PSEA7 Bifunctional protein HldE OS=Pseudomonas aeruginosa (strain PA7)
GN=hldE PE=3 SV=1
Length = 474
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 65/122 (53%), Gaps = 10/122 (8%)
Query: 43 GVFSLPHLWSDCFHKKKCGKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSD 102
GV L L + G+K V+ +GCFD++H GH L QA+A GD L+VGV D
Sbjct: 320 GVLGLEQLLLAIEDARAHGEKI---VFTNGCFDILHAGHVTYLEQARAQGDRLIVGVNDD 376
Query: 103 EEIIANKGP--PVLSMEERLALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHG 160
+ KG P+ S++ R+A+++GL VD V++ A E RL + + D ++ G
Sbjct: 377 ASVTRLKGAGRPINSVDRRMAVLAGLGAVDWVVSFA-----EDTPERLLEQVRPDVLVKG 431
Query: 161 DD 162
D
Sbjct: 432 GD 433
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 224 RAIQSKDAHLSQFLPTSRRIVQFSNCKGPGPNARVVYIDGAFDLFHAGHVEILKKARQLG 283
RA+Q + L + ++ + + G ++V+ +G FD+ HAGHV L++AR G
Sbjct: 309 RAVQREQGSERGVLGLEQLLLAIEDARAHGE--KIVFTNGCFDILHAGHVTYLEQARAQG 366
Query: 284 DFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA 318
D L+VG+ D V+ +G+ PI + +R ++VLA
Sbjct: 367 DRLIVGVNDDASVTRLKGAGRPINSV-DRRMAVLA 400
>sp|B8EE43|HLDE_SHEB2 Bifunctional protein HldE OS=Shewanella baltica (strain OS223)
GN=hldE PE=3 SV=1
Length = 476
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 86/165 (52%), Gaps = 11/165 (6%)
Query: 41 GIGVFSLPHLWSDCFHKKKCGKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVV 100
G GV S L K G++ V +GCFD++H GH + L+QAKALGD L+V V
Sbjct: 320 GFGVVSEDQLAYALEQAKLRGERV---VMTNGCFDILHAGHVSYLKQAKALGDRLIVAVN 376
Query: 101 SDEEI--IANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYII 158
D + + +G PV ++ R+A+++GL VD V+ P+ +E R+ + ++
Sbjct: 377 DDASVKRLKGEGRPVNQVDRRMAVLAGLASVDWVV---PF--SEDTPQRIITRLLPNLLV 431
Query: 159 HGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSS 203
G D L A +A G+ + + +G+S+T I+ I+++
Sbjct: 432 KGGDYKLEDIAGGAEVIAAG-GQVQVLGFEDGISTTAIIQNIMAN 475
Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 72/140 (51%), Gaps = 5/140 (3%)
Query: 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSV 316
RVV +G FD+ HAGHV LK+A+ LGD L+V + D V +G P+ + +R ++V
Sbjct: 342 RVVMTNGCFDILHAGHVSYLKQAKALGDRLIVAVNDDASVKRLKGEGRPVNQV-DRRMAV 400
Query: 317 LACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQL 376
LA + ++ + + +IT L+V G + L + EV + G Q+
Sbjct: 401 LAGLASVDWVVPFSEDTPQRIITRLLPNLLVKG----GDYKLEDIAGGAEVIAAGGQVQV 456
Query: 377 LESPKSITTTSVAQRIIANH 396
L I+TT++ Q I+AN
Sbjct: 457 LGFEDGISTTAIIQNIMANQ 476
>sp|Q1R1M6|HLDE_CHRSD Bifunctional protein HldE OS=Chromohalobacter salexigens (strain
DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=hldE PE=3 SV=1
Length = 476
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 86/180 (47%), Gaps = 20/180 (11%)
Query: 27 LTAALLGVSTSYFGGIGVFSLPHLWSDCFHKKKCGKKKRVRVYM-DGCFDLMHYGHANAL 85
L AL G + FG P S + K + RV M +GCFD++H GH L
Sbjct: 308 LYTALHGDKLAEFG-------PIEESALIDAVRAAKLRGERVVMTNGCFDILHAGHVAYL 360
Query: 86 RQAKALGDELVVGVVSDEEIIANKGP--PVLSMEERLALVSGLKWVDEVIANAPYAITEQ 143
QAK LGD LVV V D + KGP P+ ++E R+ +++GL VD V+ P+ E+
Sbjct: 361 EQAKRLGDRLVVAVNDDASVGRLKGPKRPINALERRMQVLAGLSAVDWVV---PFG--EE 415
Query: 144 FMNRLFNEHKIDYIIHGDD--PCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRIL 201
RL E D ++ G D P + G A G + + +GVS+T ++ IL
Sbjct: 416 TPARLIAEVLPDVLVKGGDYRPEDIAGGEAVMAAG---GEVRVLNFEDGVSTTAMIDTIL 472
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSV 316
RVV +G FD+ HAGHV L++A++LGD L+V + D V +G PI L ER + V
Sbjct: 341 RVVMTNGCFDILHAGHVAYLEQAKRLGDRLVVAVNDDASVGRLKGPKRPINAL-ERRMQV 399
Query: 317 LA 318
LA
Sbjct: 400 LA 401
>sp|Q0HYC0|HLDE_SHESR Bifunctional protein HldE OS=Shewanella sp. (strain MR-7) GN=hldE
PE=3 SV=1
Length = 476
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 11/164 (6%)
Query: 41 GIGVFSLPHLWSDCFHKKKCGKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVV 100
G GV S L K G++ V +GCFD++H GH + L+QAKALGD L+V V
Sbjct: 320 GFGVVSEDQLAYALEQAKLRGERV---VMTNGCFDILHAGHVSYLKQAKALGDRLIVAVN 376
Query: 101 SDEEI--IANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYII 158
D + + +G PV ++ R+A+++GL VD V+ P+ +E R+ D ++
Sbjct: 377 DDASVKRLKGEGRPVNQVDRRMAVLAGLAAVDWVV---PF--SEDTPQRIIARLLPDLLV 431
Query: 159 HGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILS 202
G D + A +A G+ + + +G+S+T I+ I++
Sbjct: 432 KGGDYKIEDIAGGAEVIAAG-GQVQVLGFEDGISTTAIIQNIMA 474
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 69/140 (49%), Gaps = 5/140 (3%)
Query: 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSV 316
RVV +G FD+ HAGHV LK+A+ LGD L+V + D V +G P+ + +R ++V
Sbjct: 342 RVVMTNGCFDILHAGHVSYLKQAKALGDRLIVAVNDDASVKRLKGEGRPVNQV-DRRMAV 400
Query: 317 LACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQL 376
LA + ++ + + +I L+V G + G EV + G Q+
Sbjct: 401 LAGLAAVDWVVPFSEDTPQRIIARLLPDLLVKGGDYKIEDIAGG----AEVIAAGGQVQV 456
Query: 377 LESPKSITTTSVAQRIIANH 396
L I+TT++ Q I+A
Sbjct: 457 LGFEDGISTTAIIQNIMAKQ 476
>sp|Q0HFL0|HLDE_SHESM Bifunctional protein HldE OS=Shewanella sp. (strain MR-4) GN=hldE
PE=3 SV=1
Length = 476
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 11/164 (6%)
Query: 41 GIGVFSLPHLWSDCFHKKKCGKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVV 100
G GV S L K G++ V +GCFD++H GH + L+QAKALGD L+V V
Sbjct: 320 GFGVVSEDQLAYALEQAKLRGERV---VMTNGCFDILHAGHVSYLKQAKALGDRLIVAVN 376
Query: 101 SDEEI--IANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYII 158
D + + +G PV ++ R+A+++GL VD V+ P+ +E R+ D ++
Sbjct: 377 DDASVKRLKGEGRPVNQVDRRMAVLAGLAAVDWVV---PF--SEDTPQRIIARLLPDLLV 431
Query: 159 HGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILS 202
G D + A +A G+ + + +G+S+T I+ I++
Sbjct: 432 KGGDYKIEDIAGGAEVIAAG-GQVQVLGFEDGISTTAIIQNIMA 474
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 69/140 (49%), Gaps = 5/140 (3%)
Query: 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSV 316
RVV +G FD+ HAGHV LK+A+ LGD L+V + D V +G P+ + +R ++V
Sbjct: 342 RVVMTNGCFDILHAGHVSYLKQAKALGDRLIVAVNDDASVKRLKGEGRPVNQV-DRRMAV 400
Query: 317 LACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQL 376
LA + ++ + + +I L+V G + G EV + G Q+
Sbjct: 401 LAGLAAVDWVVPFSEDTPQRIIARLLPDLLVKGGDYKIEDIAGG----AEVIAAGGQVQV 456
Query: 377 LESPKSITTTSVAQRIIANH 396
L I+TT++ Q I+A
Sbjct: 457 LGFEDGISTTAIIQNIMAKQ 476
>sp|B7V388|HLDE_PSEA8 Bifunctional protein HldE OS=Pseudomonas aeruginosa (strain LESB58)
GN=hldE PE=3 SV=1
Length = 473
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 65/122 (53%), Gaps = 10/122 (8%)
Query: 43 GVFSLPHLWSDCFHKKKCGKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSD 102
GV L L + G+K V+ +GCFD++H GH L QA+A GD L+VGV D
Sbjct: 320 GVLGLEQLLLAIEDARAHGEKI---VFTNGCFDILHAGHVTYLEQARAQGDRLIVGVNDD 376
Query: 103 EEIIANK--GPPVLSMEERLALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHG 160
+ K G P+ S++ R+A+++GL VD V++ A E RL + + D ++ G
Sbjct: 377 ASVTRLKGVGRPINSVDRRMAVLAGLGAVDWVVSFA-----EDTPERLLEQVRPDVLVKG 431
Query: 161 DD 162
D
Sbjct: 432 GD 433
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 3/95 (3%)
Query: 224 RAIQSKDAHLSQFLPTSRRIVQFSNCKGPGPNARVVYIDGAFDLFHAGHVEILKKARQLG 283
RA+Q + L + ++ + + G ++V+ +G FD+ HAGHV L++AR G
Sbjct: 309 RAVQREQGSERGVLGLEQLLLAIEDARAHGE--KIVFTNGCFDILHAGHVTYLEQARAQG 366
Query: 284 DFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA 318
D L+VG+ D V+ +G PI + +R ++VLA
Sbjct: 367 DRLIVGVNDDASVTRLKGVGRPINSV-DRRMAVLA 400
>sp|C3KDB8|HLDE_PSEFS Bifunctional protein HldE OS=Pseudomonas fluorescens (strain SBW25)
GN=hldE PE=3 SV=1
Length = 474
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 74/139 (53%), Gaps = 16/139 (11%)
Query: 68 VYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGP--PVLSMEERLALVSG 125
V+ +GCFD++H GH L QA+A GD L+V V D + KGP P+ S++ R+A+++G
Sbjct: 342 VFTNGCFDILHAGHVTYLEQARAQGDRLIVAVNDDASVSRLKGPGRPINSVDRRMAVLAG 401
Query: 126 LKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGD----DPCLLPDGTDAYALAKKVGR 181
L VD VI + P A E + ++ K D ++ G D + D AY G+
Sbjct: 402 LGAVDWVI-SFPEATPENLLAQV----KPDVLVKGGDYSVDQVVGADIVSAYG-----GK 451
Query: 182 YKQIKRTEGVSSTDIVGRI 200
K + E S+T IV +I
Sbjct: 452 VKVLGLVENSSTTAIVEKI 470
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 3/126 (2%)
Query: 224 RAIQSKDAHLSQFLPTSRRIVQFSNCKGPGPNARVVYIDGAFDLFHAGHVEILKKARQLG 283
RAIQ + L + ++ + + N +V+ +G FD+ HAGHV L++AR G
Sbjct: 309 RAIQRSEGSERGVLTIEQLLLAIDDARAH--NESIVFTNGCFDILHAGHVTYLEQARAQG 366
Query: 284 DFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNI 343
D L+V + D VS +G PI + +R ++VLA + +I P ++++
Sbjct: 367 DRLIVAVNDDASVSRLKGPGRPINSV-DRRMAVLAGLGAVDWVISFPEATPENLLAQVKP 425
Query: 344 CLVVHG 349
++V G
Sbjct: 426 DVLVKG 431
>sp|Q9HUG9|HLDE_PSEAE Bifunctional protein HldE OS=Pseudomonas aeruginosa (strain ATCC
15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=hldE PE=3
SV=1
Length = 474
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 65/122 (53%), Gaps = 10/122 (8%)
Query: 43 GVFSLPHLWSDCFHKKKCGKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSD 102
GV L L + G+K V+ +GCFD++H GH L QA+A GD L+VGV D
Sbjct: 320 GVLGLEQLLLAIEDARAHGEKI---VFTNGCFDILHAGHVTYLEQARAQGDRLIVGVNDD 376
Query: 103 EEIIANK--GPPVLSMEERLALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHG 160
+ K G P+ S++ R+A+++GL VD V++ A E RL + + D ++ G
Sbjct: 377 ASVTRLKGVGRPINSVDRRMAVLAGLGAVDWVVSFA-----EDTPERLLEQVRPDVLVKG 431
Query: 161 DD 162
D
Sbjct: 432 GD 433
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 3/95 (3%)
Query: 224 RAIQSKDAHLSQFLPTSRRIVQFSNCKGPGPNARVVYIDGAFDLFHAGHVEILKKARQLG 283
RA+Q + L + ++ + + G ++V+ +G FD+ HAGHV L++AR G
Sbjct: 309 RAVQREQGSERGVLGLEQLLLAIEDARAHGE--KIVFTNGCFDILHAGHVTYLEQARAQG 366
Query: 284 DFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA 318
D L+VG+ D V+ +G PI + +R ++VLA
Sbjct: 367 DRLIVGVNDDASVTRLKGVGRPINSV-DRRMAVLA 400
>sp|Q02F21|HLDE_PSEAB Bifunctional protein HldE OS=Pseudomonas aeruginosa (strain
UCBPP-PA14) GN=hldE PE=3 SV=1
Length = 474
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 65/122 (53%), Gaps = 10/122 (8%)
Query: 43 GVFSLPHLWSDCFHKKKCGKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSD 102
GV L L + G+K V+ +GCFD++H GH L QA+A GD L+VGV D
Sbjct: 320 GVLGLEQLLLAIEDARAHGEKI---VFTNGCFDILHAGHVTYLEQARAQGDRLIVGVNDD 376
Query: 103 EEIIANK--GPPVLSMEERLALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHG 160
+ K G P+ S++ R+A+++GL VD V++ A E RL + + D ++ G
Sbjct: 377 ASVTRLKGVGRPINSVDRRMAVLAGLGAVDWVVSFA-----EDTPERLLEQVRPDVLVKG 431
Query: 161 DD 162
D
Sbjct: 432 GD 433
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 3/95 (3%)
Query: 224 RAIQSKDAHLSQFLPTSRRIVQFSNCKGPGPNARVVYIDGAFDLFHAGHVEILKKARQLG 283
RA+Q + L + ++ + + G ++V+ +G FD+ HAGHV L++AR G
Sbjct: 309 RAVQREQGSERGVLGLEQLLLAIEDARAHGE--KIVFTNGCFDILHAGHVTYLEQARAQG 366
Query: 284 DFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA 318
D L+VG+ D V+ +G PI + +R ++VLA
Sbjct: 367 DRLIVGVNDDASVTRLKGVGRPINSV-DRRMAVLA 400
>sp|A0KTG8|HLDE_SHESA Bifunctional protein HldE OS=Shewanella sp. (strain ANA-3) GN=hldE
PE=3 SV=1
Length = 476
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 11/164 (6%)
Query: 41 GIGVFSLPHLWSDCFHKKKCGKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVV 100
G GV S L K G++ V +GCFD++H GH + L+QAKALGD L+V V
Sbjct: 320 GFGVVSEDQLAYALEQAKLRGERV---VMTNGCFDILHAGHVSYLKQAKALGDRLIVAVN 376
Query: 101 SDEEI--IANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYII 158
D + + +G PV ++ R+A+++GL VD V+ P+ +E R+ D ++
Sbjct: 377 DDASVKRLKGEGRPVNQVDRRMAVLAGLAAVDWVV---PF--SEDTPQRIIARLLPDLLV 431
Query: 159 HGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILS 202
G D + A +A G+ + + +G+S+T I+ I++
Sbjct: 432 KGGDYKVEDIAGGAEVIAAG-GQVQVLGFEDGISTTAIIQNIMA 474
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 69/140 (49%), Gaps = 5/140 (3%)
Query: 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSV 316
RVV +G FD+ HAGHV LK+A+ LGD L+V + D V +G P+ + +R ++V
Sbjct: 342 RVVMTNGCFDILHAGHVSYLKQAKALGDRLIVAVNDDASVKRLKGEGRPVNQV-DRRMAV 400
Query: 317 LACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQL 376
LA + ++ + + +I L+V G + G EV + G Q+
Sbjct: 401 LAGLAAVDWVVPFSEDTPQRIIARLLPDLLVKGGDYKVEDIAGG----AEVIAAGGQVQV 456
Query: 377 LESPKSITTTSVAQRIIANH 396
L I+TT++ Q I+A
Sbjct: 457 LGFEDGISTTAIIQNIMAKQ 476
>sp|C1DGT9|HLDE_AZOVD Bifunctional protein HldE OS=Azotobacter vinelandii (strain DJ /
ATCC BAA-1303) GN=hldE PE=3 SV=1
Length = 474
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 79/164 (48%), Gaps = 19/164 (11%)
Query: 43 GVFSLPHLWSDCFHKKKCGKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSD 102
GV L L G+K V+ +GCFD++H GH L QA+A GD L+V V D
Sbjct: 320 GVLGLEQLLLAIEDAHAQGEKI---VFTNGCFDILHAGHVTYLEQARAQGDRLIVAVNDD 376
Query: 103 EEIIANKGP--PVLSMEERLALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHG 160
+ KGP P+ +++ R+A+++GL VD VI+ A E RL + + D ++ G
Sbjct: 377 ASVTRLKGPGRPINTVDRRMAVLAGLGAVDWVISFA-----EDTPERLLEQIRPDVLVKG 431
Query: 161 DDPCLLPDGTDAYALAKKV----GRYKQIKRTEGVSSTDIVGRI 200
D G D A V G + + E S+T IV +I
Sbjct: 432 GD-----YGIDQVVGADIVRAHGGEVRVLGLVENSSTTGIVEKI 470
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 224 RAIQSKDAHLSQFLPTSRRIVQFSNCKGPGPNARVVYIDGAFDLFHAGHVEILKKARQLG 283
RA+Q + L + ++ + G ++V+ +G FD+ HAGHV L++AR G
Sbjct: 309 RAVQREQGSERGVLGLEQLLLAIEDAHAQG--EKIVFTNGCFDILHAGHVTYLEQARAQG 366
Query: 284 DFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA 318
D L+V + D V+ +G PI + +R ++VLA
Sbjct: 367 DRLIVAVNDDASVTRLKGPGRPINTV-DRRMAVLA 400
>sp|A3D837|HLDE_SHEB5 Bifunctional protein HldE OS=Shewanella baltica (strain OS155 /
ATCC BAA-1091) GN=hldE PE=3 SV=1
Length = 476
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 85/165 (51%), Gaps = 11/165 (6%)
Query: 41 GIGVFSLPHLWSDCFHKKKCGKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVV 100
G GV S L K G++ V +GCFD++H GH + L+QAKALGD L+V V
Sbjct: 320 GFGVVSEDQLAYALEQAKLRGERV---VMTNGCFDILHAGHVSYLKQAKALGDRLIVAVN 376
Query: 101 SDEEI--IANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYII 158
D + + G PV ++ R+A+++GL VD V+ P+ +E R+ + ++
Sbjct: 377 DDASVKRLKGDGRPVNQVDRRMAVLAGLASVDWVV---PF--SEDTPQRIITRLLPNLLV 431
Query: 159 HGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSS 203
G D L A +A G+ + + +G+S+T I+ I+++
Sbjct: 432 KGGDYKLEDIAGGAEVIAAG-GQVQVLGFEDGISTTAIIQNIMAN 475
Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 72/140 (51%), Gaps = 5/140 (3%)
Query: 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSV 316
RVV +G FD+ HAGHV LK+A+ LGD L+V + D V +G P+ + +R ++V
Sbjct: 342 RVVMTNGCFDILHAGHVSYLKQAKALGDRLIVAVNDDASVKRLKGDGRPVNQV-DRRMAV 400
Query: 317 LACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQL 376
LA + ++ + + +IT L+V G + L + EV + G Q+
Sbjct: 401 LAGLASVDWVVPFSEDTPQRIITRLLPNLLVKG----GDYKLEDIAGGAEVIAAGGQVQV 456
Query: 377 LESPKSITTTSVAQRIIANH 396
L I+TT++ Q I+AN
Sbjct: 457 LGFEDGISTTAIIQNIMANQ 476
>sp|A0KPL4|HLDE_AERHH Bifunctional protein HldE OS=Aeromonas hydrophila subsp. hydrophila
(strain ATCC 7966 / NCIB 9240) GN=hldE PE=3 SV=1
Length = 475
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 80/163 (49%), Gaps = 13/163 (7%)
Query: 41 GIGVFSLPHLWSDCFHKKKCGKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVV 100
G GV S L + G+K V +GCFD++H GH + L A LGD L+V V
Sbjct: 319 GFGVMSEAQLKIAVQAARLRGEKV---VMTNGCFDILHAGHVSYLANAGKLGDRLIVAVN 375
Query: 101 SDEEIIANKGP--PVLSMEERLALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYII 158
+DE + KGP PV E R+A+++ L VD V+ P+A E RL E D ++
Sbjct: 376 TDESVRRLKGPGRPVNPTERRMAVLAALGAVDWVV---PFA--EDTPQRLIAEVLPDLLV 430
Query: 159 HGDDPCLLPDGTDAYA-LAKKVGRYKQIKRTEGVSSTDIVGRI 200
G D P+ YA + G + + +G S++DI+ I
Sbjct: 431 KGGD--YKPEEIAGYAEVTANGGEVRVLNFEDGCSTSDIIKTI 471
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 244 VQFSNCKGPGPNARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSY 303
VQ + +G +VV +G FD+ HAGHV L A +LGD L+V + TD+ V +G
Sbjct: 332 VQAARLRG----EKVVMTNGCFDILHAGHVSYLANAGKLGDRLIVAVNTDESVRRLKGPG 387
Query: 304 HPIMHLHERSLSVLAC 319
P+ + ER ++VLA
Sbjct: 388 RPV-NPTERRMAVLAA 402
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 161,244,912
Number of Sequences: 539616
Number of extensions: 6808258
Number of successful extensions: 18327
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 305
Number of HSP's successfully gapped in prelim test: 154
Number of HSP's that attempted gapping in prelim test: 17351
Number of HSP's gapped (non-prelim): 920
length of query: 423
length of database: 191,569,459
effective HSP length: 120
effective length of query: 303
effective length of database: 126,815,539
effective search space: 38425108317
effective search space used: 38425108317
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)