BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014489
(423 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P38355|YB8B_YEAST Uncharacterized transporter YBR287W OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YBR287W PE=1 SV=1
Length = 427
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 175/416 (42%), Gaps = 40/416 (9%)
Query: 14 IVQVLLISVLGALMATQYWNLLTADARRSLNKMVFTVFTPSLMFASLAKTVTLEEIISWW 73
++QV++I++ G A+ LL +++ ++ + +FTP L+F+ LAK++++ +I
Sbjct: 18 VLQVVIIALAGFWSASS--GLLPKQSQKIISLLNVDLFTPCLIFSKLAKSLSMAKIFEIA 75
Query: 74 FMPVNVAMTFLIGGILGWIVVKLLRPKPHLEGLVIATCASGNLGNL-------LLIIVPA 126
+P+ +T I I G I+ ++L V+A GN +L L +P
Sbjct: 76 IIPIFFGLTTGISFISGKIMSRILDLDKDETNFVVANSVFGNSNSLPVSLTLSLAYTLPN 135
Query: 127 ICHEQGSPFGNRDVCSSVGLSYASFSMALGGFFIWSYSY-QLIKQSSVRYKALAQAAEPE 185
+ +Q P NRD +S G+ Y +G WS+ Y +L+K S Q P
Sbjct: 136 LTWDQ-IPNDNRDNVASRGILYLLIFQQIGQMLRWSWGYNKLMKWSGEN----TQHMPPS 190
Query: 186 EVPKEVNKDFDANAQTQLLRGTTDDQEDVSVLVASTKSSSDPECQIIVPQASHLQTRKES 245
+V Q+ L R D E++ + + E + + +
Sbjct: 191 QV------------QSLLERTPNIDNEELVNEEQEEQELLEEENNRMNSSFLSSSSIGDK 238
Query: 246 FWKRSLEFLHQLLEELLAPPTLAAIVGFIFGAVVWL-RNLIIGDSAPLRVIQDSIEILGD 304
W++S ++ L PP + I + A+ L R L + D +++ LG
Sbjct: 239 IWQKSCTVFERIRAN-LNPPLYSMIFAVVVAAIGPLQRELFMEDGFINNTFAEAVTQLGS 297
Query: 305 GTIPCITLILGGNLIQGL--------RSSTLKPLIIIAVVCVRYIALPFIGVWVVKAAAA 356
+IP I ++LG NL S L II ++ LP I + V +
Sbjct: 298 VSIPLILVVLGSNLYPSAEVFPKTVHHSKLLIGSIIGRMILPSCFLLPIIAIAVKYINVS 357
Query: 357 LGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALT 412
+ DP++ V + PPA+ + +TQL + + E + + W Y V +L ++
Sbjct: 358 IL---DDPIFLVVGFLLTVSPPAIQLTQITQLNEFFEAEMADILFWGYAVLSLPVS 410
>sp|O14197|YDQ4_SCHPO Uncharacterized transporter C5D6.04 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC5D6.04 PE=3 SV=1
Length = 452
Score = 58.9 bits (141), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 81/420 (19%), Positives = 172/420 (40%), Gaps = 40/420 (9%)
Query: 15 VQVLLISVLGALMATQYWNLLTADARRSLNKMVFTVFTPSLMFASLAKTVTLEEIISWWF 74
++V++I++ G ++A + L DA++ ++ + FTP L+F + + L+ +I
Sbjct: 24 LEVIVIALGGYVLAKK--GFLPRDAQKVISSLNVYFFTPCLVFEKVGNGLNLKMLIDLSL 81
Query: 75 MPVNVAMTFLIGGILGWIVVKLLRPKPHLEGLVIATCASGNLGNLLLIIVPAICHEQGS- 133
+PV + ++ +++ KL R P A N +L L +V ++
Sbjct: 82 LPVFYVIISAASILISFLLAKLFRLTPRQRNFATACITFQNSNSLPLALVSSLATTVKDL 141
Query: 134 -----PFGNRDVCSSVGLSYASFSMALGGFFIWSYSYQLIKQSS-------VRYKALAQA 181
P D +S G+ Y LG WSY Y+++ + + ++ + +
Sbjct: 142 LWDKIPDDTPDKVASRGIMYLLIFSQLGQALRWSYGYRILLSPNQPEDPLPIGNRSWSHS 201
Query: 182 AEPEEVPKEVNKDFDANAQTQLLRGTTDDQEDVSVLVASTKSSSDPECQIIVPQASHLQT 241
EE E+ ++A ++ + E +V S+ S + Q+ + S+ +
Sbjct: 202 DVNEE---EIQNLLASSANVDGVQNSVQANEGSTVQTDSSAISKNDNVQV---ETSNEEV 255
Query: 242 RKESFWKRSLEFLHQLLEELLAPPTLAAIVGFIFGAVVWLRNLIIGDSAPLR-VIQDSIE 300
+ LL + +PP + + V L+ + + + I I
Sbjct: 256 GGFGAASSKISKFIVLLLDFFSPPLYSLFIALFIAVVPPLQRFFFEEGSFVEGSITSGIR 315
Query: 301 ILGDGTIPCITLILGGNL---------IQGLRSSTLKPLIIIAVVCVRYIALPFIGVWVV 351
+ G +P I ++LG +L Q +R + +II+ ++ R + +P ++
Sbjct: 316 MAGQVAVPMILVVLGASLATDISKTEPTQEVRKNNDTRVIIVCLLG-RMVVVPLA---LL 371
Query: 352 KAAAALGFLP-----SDPLYHYVLMVQFTLPPAMNIGTMTQLFDVAQEECSVLFLWTYLV 406
A + L + DP++ V+ + P A+ + + QL V + EC+ + W+Y V
Sbjct: 372 PAFSLLSYFSEISTVDDPVFVVVIFLLVGSPTAIQLTQICQLNGVFERECAKVLWWSYAV 431
>sp|P53932|YNJ5_YEAST Uncharacterized transporter YNL095C OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YNL095C PE=1 SV=1
Length = 642
Score = 40.0 bits (92), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 97/229 (42%), Gaps = 17/229 (7%)
Query: 9 VASMPIVQVLLISVLGALMATQYWNLLTADARRSLNKMVFTVFTPSLMFASLAKTVTLEE 68
V+ PI+++ LI +G LMA +LT +A R ++ +V TV PSL F + + ++
Sbjct: 12 VSVKPIIKIYLIIGVGFLMAKM--GILTVEATRIISDIVLTVLLPSLSFNKIVANIEDKD 69
Query: 69 IISWWFMPVNVAMTFLIGGILGWIVVKLLRPKPHL-EGLVIATCASGNLGNLLLIIVPAI 127
I S + ++ + F G + VV+L P P G ++A N+ +L + + ++
Sbjct: 70 IKSVGIICLSALLIFGSGFFFAY-VVRLFLPVPKQWYGGILAGGMFPNISDLPIAYLQSM 128
Query: 128 CHEQGSPFGNRDVCSSVGLSYASFSM------ALGGFFIWSYSYQLIKQSSVRYKALAQA 181
+QG F + V +M LGGF + ++ S +
Sbjct: 129 --DQGLVFSEEEGNKGVANVIIFLTMFLICIFNLGGFRLIESDFEYNDDESAVRVSETTK 186
Query: 182 AEPEEVPKEVNKD----FDANAQTQLLRGTTDDQEDVSVLVASTKSSSD 226
+P N D F +N Q QL ++ ++ + + ++D
Sbjct: 187 TQPAVSANTTNTDTSERFFSNEQ-QLFNNKYTARDSLTEAIGTKGENAD 234
>sp|P54072|YL152_YEAST Uncharacterized transporter YLR152C OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YLR152C PE=1 SV=1
Length = 576
Score = 37.4 bits (85), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 119/280 (42%), Gaps = 40/280 (14%)
Query: 165 YQLIKQSSVRYKALAQAAEPEEVPKEVNKDFDA-----NAQTQLLRGTTDDQEDVSVL-- 217
+ I SS+ Y +++ ++ ++ D + +A ++ +G D +S+
Sbjct: 280 FSRIDGSSLSYSRISKNSDGRSYRRKRKADMNELISKYSAAEKIRQGELDLSRPLSLTEE 339
Query: 218 -------VASTKSSSDPECQIIVPQASHLQTRKE---SFW--KRSLEFLHQLLEELLAPP 265
+ + + E I +++ T SF+ + +L++L + L P
Sbjct: 340 VGSRNASIGNVHTGYTDESSIEEENCTNMATDGRGSLSFFIERHNLKWLQYFIINCLRPA 399
Query: 266 TLAAIVGFIFGAVVWLRNLIIG---------DSAP-LRVIQDSIEILGDGTIPCITLILG 315
+L AI+G I + W++ + D P L + D E +G+ +P L+LG
Sbjct: 400 SLGAILGIICALIPWVKACFVTTYVHVHKAPDGEPVLNFLMDFTEYIGNACVPLGLLLLG 459
Query: 316 GNLIQGLRSSTLKPLII---IAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMV 372
G L + L +L P I + + C R I +P IGV V ++ +L + + + +++
Sbjct: 460 GTLAR-LEIKSLPPGFIKSALLMTCFRLIVIPIIGVLWVNKLYSIDWLDTG-IGKFDMIL 517
Query: 373 QFTLPPAMNIGTMTQLF-----DVAQEEC-SVLFLWTYLV 406
+++P A T + D Q C SVLF+ Y +
Sbjct: 518 TWSMPSATAQVYFTAFYTPACGDHIQMNCLSVLFVMQYAI 557
>sp|Q58437|Y1031_METJA Uncharacterized transporter MJ1031 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1031 PE=3 SV=1
Length = 308
Score = 37.0 bits (84), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
Query: 29 TQYWNLLTADARRSLNKMVFTVFTPSLMFASLAKTVTLEEIISWWFMPVNVAMTFLIGGI 88
++ + +L + + LN +V + PS +F +++K V+ +I+ + +PV + + L GI
Sbjct: 20 SKIFGILKEEHAKILNNIVIYIAMPSTIFLTISKNVSSSQILEFLKLPVVIFLCCLFVGI 79
Query: 89 LGWIVVK-LLRPKPHLEGLVIATCASGNLGNLLLIIVPAICHEQG 132
L +++ K + + K G +I GN G L + + E+G
Sbjct: 80 LAYLLGKHIFKLKDEKLGGLILVSMLGNTGFLGYPVALGMFGEEG 124
>sp|Q99252|ECM3_YEAST Protein ECM3 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=ECM3 PE=1 SV=1
Length = 613
Score = 34.3 bits (77), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 97/244 (39%), Gaps = 26/244 (10%)
Query: 13 PIVQVLLISVLGALMATQYWNLLTADARRSLNKMVFTVFTPSLMFASLAKTVTLEEIISW 72
PI+++ LI +G N+LT A RS++ +V T+ P L F + + +I
Sbjct: 16 PIIKIYLI--IGVGFGLCKMNILTVQATRSISDIVLTILLPCLSFNKIVANIEDNDIKDV 73
Query: 73 WFMPVNVAMTFLIGGILGWIVVKLLRPKPHLEGLVIATCASGNLGNLLLIIVPAICHEQG 132
+ + + F G +IV +L G ++A N+ +L + + ++ +QG
Sbjct: 74 GIICLTSVILFATGLGFAFIVRSVLPVPKRWRGGILAGGMFPNISDLPIAYLQSM--DQG 131
Query: 133 SPFGNRDVCSSVGLSYASFSMALGGFFIWSYS---YQLIKQSSVRYKALAQAAEPEEVPK 189
F + V A+ + L F I ++ ++LI ++ YK + EE
Sbjct: 132 FIFTEAEGEKGV----ANVIIFLAMFLICVFNLGGFRLI-ENDFHYK----GDDDEE--N 180
Query: 190 EVNKDFDANAQTQLLRGTTDDQEDVSVLVASTKSSSDPECQIIVPQASHLQTRKESFWKR 249
+ D A TQ + G + + +L +S+ VP +S E K
Sbjct: 181 TLTNDDSAQQPTQPIEGNSSSSSNQDILKEPNEST--------VPNSSQASYISEKNKKE 232
Query: 250 SLEF 253
E
Sbjct: 233 KTEL 236
>sp|A1T741|IDI2_MYCVP Isopentenyl-diphosphate delta-isomerase OS=Mycobacterium
vanbaalenii (strain DSM 7251 / PYR-1) GN=fni PE=3 SV=1
Length = 342
Score = 32.0 bits (71), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Query: 113 SGNLGNLL----LIIVPAICHEQGSPFGNRDVCSSVGLSYASFSMALGGFFIWSYSYQLI 168
SG++G L I P + E G G VG A+ +A G W+ Q +
Sbjct: 175 SGSIGRLCDVAGAIGYPVVLKEVGHGIGAAAAAELVGCPIAAIDVAGAGGTSWARIEQFV 234
Query: 169 KQSSVRYKALAQ 180
+ VRY ALA+
Sbjct: 235 RYGDVRYPALAE 246
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.138 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 146,174,506
Number of Sequences: 539616
Number of extensions: 5806819
Number of successful extensions: 18772
Number of sequences better than 100.0: 22
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 18755
Number of HSP's gapped (non-prelim): 25
length of query: 423
length of database: 191,569,459
effective HSP length: 120
effective length of query: 303
effective length of database: 126,815,539
effective search space: 38425108317
effective search space used: 38425108317
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 63 (28.9 bits)