Query 014490
Match_columns 423
No_of_seqs 156 out of 1654
Neff 9.1
Searched_HMMs 46136
Date Fri Mar 29 05:39:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014490.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014490hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02280 IAA-amino acid hydrol 100.0 6.7E-62 1.5E-66 487.6 46.9 376 47-422 94-471 (478)
2 PLN02693 IAA-amino acid hydrol 100.0 4.1E-60 8.9E-65 472.0 46.9 388 32-422 29-418 (437)
3 PRK08588 succinyl-diaminopimel 100.0 2E-55 4.3E-60 434.0 36.1 353 50-422 2-373 (377)
4 COG1473 AbgB Metal-dependent a 100.0 3.8E-54 8.2E-59 416.0 43.2 370 50-422 12-386 (392)
5 PRK06915 acetylornithine deace 100.0 5.9E-55 1.3E-59 436.7 36.3 367 35-422 4-415 (422)
6 TIGR01891 amidohydrolases amid 100.0 9.7E-53 2.1E-57 412.5 41.2 356 53-410 2-360 (363)
7 PRK13013 succinyl-diaminopimel 100.0 4.9E-53 1.1E-57 423.8 36.6 365 37-422 3-419 (427)
8 PRK06133 glutamate carboxypept 100.0 3.9E-52 8.4E-57 414.0 40.1 362 36-422 25-404 (410)
9 PRK13983 diaminopimelate amino 100.0 1.2E-52 2.6E-57 417.7 34.7 359 50-423 5-399 (400)
10 PRK06837 acetylornithine deace 100.0 4.5E-52 9.9E-57 415.9 35.3 365 35-422 7-419 (427)
11 TIGR01910 DapE-ArgE acetylorni 100.0 5.8E-53 1.3E-57 416.1 27.8 347 54-416 2-375 (375)
12 PRK07338 hypothetical protein; 100.0 2.4E-51 5.1E-56 408.3 38.2 359 36-422 5-395 (402)
13 PRK13009 succinyl-diaminopimel 100.0 1.3E-51 2.9E-56 406.6 35.7 352 51-422 3-371 (375)
14 PRK13004 peptidase; Reviewed 100.0 1.3E-51 2.8E-56 409.4 33.7 363 37-422 4-393 (399)
15 TIGR03526 selenium_YgeY putati 100.0 1.9E-51 4.2E-56 407.6 33.4 362 38-422 3-391 (395)
16 TIGR03320 ygeY M20/DapE family 100.0 1.5E-51 3.4E-56 408.5 32.6 362 38-422 3-391 (395)
17 PRK08596 acetylornithine deace 100.0 3.8E-51 8.3E-56 408.5 35.3 363 38-422 3-413 (421)
18 TIGR01246 dapE_proteo succinyl 100.0 3.2E-51 7E-56 403.1 34.1 351 53-423 2-369 (370)
19 TIGR01892 AcOrn-deacetyl acety 100.0 5.8E-51 1.3E-55 400.6 33.6 338 55-421 2-364 (364)
20 PRK05111 acetylornithine deace 100.0 1E-50 2.2E-55 401.4 35.4 344 50-422 5-378 (383)
21 PRK07522 acetylornithine deace 100.0 5.5E-51 1.2E-55 403.6 32.2 346 50-422 4-381 (385)
22 TIGR01880 Ac-peptdase-euk N-ac 100.0 1.4E-50 3.1E-55 402.3 35.1 359 50-422 9-395 (400)
23 PRK09133 hypothetical protein; 100.0 3.6E-50 7.9E-55 407.1 36.0 354 50-422 37-466 (472)
24 PRK08651 succinyl-diaminopimel 100.0 3.6E-50 7.9E-55 398.9 34.8 347 50-422 6-388 (394)
25 PRK08201 hypothetical protein; 100.0 4.1E-50 8.9E-55 405.2 34.6 369 37-422 3-451 (456)
26 PRK06446 hypothetical protein; 100.0 2.5E-50 5.5E-55 404.1 32.8 358 50-422 2-431 (436)
27 PRK08652 acetylornithine deace 100.0 1.2E-49 2.6E-54 388.7 32.4 334 50-422 2-342 (347)
28 PRK08262 hypothetical protein; 100.0 1.4E-49 3E-54 404.4 33.3 362 50-422 44-481 (486)
29 PRK07473 carboxypeptidase; Pro 100.0 3.8E-48 8.1E-53 380.8 38.3 344 50-422 11-373 (376)
30 PRK09104 hypothetical protein; 100.0 1.3E-48 2.7E-53 395.0 35.9 370 37-422 6-459 (464)
31 PRK07907 hypothetical protein; 100.0 1.4E-48 3.1E-53 393.1 36.0 366 37-422 7-444 (449)
32 PRK00466 acetyl-lysine deacety 100.0 9.2E-49 2E-53 381.9 33.1 325 50-422 10-340 (346)
33 PRK04443 acetyl-lysine deacety 100.0 2.1E-48 4.6E-53 379.5 33.6 330 50-422 6-346 (348)
34 TIGR01900 dapE-gram_pos succin 100.0 3.3E-48 7.1E-53 381.0 34.0 331 55-406 1-373 (373)
35 PRK13007 succinyl-diaminopimel 100.0 4.7E-48 1E-52 378.2 34.4 334 49-421 6-351 (352)
36 TIGR01883 PepT-like peptidase 100.0 3.4E-48 7.3E-53 380.4 33.2 341 52-422 2-361 (361)
37 PRK08737 acetylornithine deace 100.0 8.8E-48 1.9E-52 376.1 34.0 335 50-423 6-363 (364)
38 PRK07906 hypothetical protein; 100.0 5.5E-48 1.2E-52 386.8 33.2 352 53-422 2-424 (426)
39 PRK13381 peptidase T; Provisio 100.0 7.6E-47 1.7E-51 375.8 34.0 344 52-422 3-400 (404)
40 TIGR01886 dipeptidase dipeptid 100.0 9.6E-47 2.1E-51 380.2 32.2 355 39-422 4-462 (466)
41 COG0624 ArgE Acetylornithine d 100.0 3.8E-46 8.3E-51 371.7 35.7 359 50-422 13-404 (409)
42 PRK07079 hypothetical protein; 100.0 3.1E-46 6.7E-51 377.9 35.1 365 38-422 9-452 (469)
43 PRK06156 hypothetical protein; 100.0 9.8E-46 2.1E-50 377.4 36.4 392 3-422 5-512 (520)
44 PRK12892 allantoate amidohydro 100.0 4E-45 8.7E-50 364.7 36.1 342 50-422 10-407 (412)
45 PRK12893 allantoate amidohydro 100.0 4.4E-45 9.5E-50 364.4 35.9 342 50-422 10-406 (412)
46 PRK05469 peptidase T; Provisio 100.0 3.6E-45 7.8E-50 364.3 34.8 347 50-422 2-402 (408)
47 PRK07318 dipeptidase PepV; Rev 100.0 1.6E-45 3.4E-50 372.3 31.1 356 38-422 4-462 (466)
48 TIGR01902 dapE-lys-deAc N-acet 100.0 1.6E-45 3.4E-50 357.8 29.7 321 55-422 2-331 (336)
49 PRK09290 allantoate amidohydro 100.0 1.2E-44 2.5E-49 361.0 36.4 341 50-422 7-407 (413)
50 TIGR01882 peptidase-T peptidas 100.0 5.8E-45 1.3E-49 362.4 32.3 345 50-422 3-404 (410)
51 PRK07205 hypothetical protein; 100.0 1.1E-44 2.5E-49 364.2 32.0 346 50-422 11-439 (444)
52 PRK12891 allantoate amidohydro 100.0 3.6E-43 7.7E-48 350.1 36.4 341 51-422 11-406 (414)
53 PRK12890 allantoate amidohydro 100.0 8E-43 1.7E-47 348.1 38.4 342 50-422 9-408 (414)
54 TIGR01879 hydantase amidase, h 100.0 2.5E-42 5.4E-47 342.8 35.3 328 64-422 25-399 (401)
55 TIGR01887 dipeptidaselike dipe 100.0 3E-42 6.5E-47 344.9 32.2 344 50-421 2-447 (447)
56 TIGR01893 aa-his-dipept aminoa 100.0 1.1E-41 2.5E-46 345.0 35.0 346 50-422 4-474 (477)
57 KOG2275 Aminoacylase ACY1 and 100.0 9.4E-42 2E-46 319.4 31.2 357 50-422 25-415 (420)
58 PRK15026 aminoacyl-histidine d 100.0 7.8E-41 1.7E-45 336.5 35.5 341 50-422 10-480 (485)
59 TIGR03176 AllC allantoate amid 100.0 1E-39 2.2E-44 323.5 36.7 342 50-422 3-400 (406)
60 PRK08554 peptidase; Reviewed 100.0 1E-40 2.2E-45 333.4 29.6 352 51-422 2-434 (438)
61 PRK13799 unknown domain/N-carb 100.0 6E-39 1.3E-43 330.5 37.7 345 48-422 179-586 (591)
62 PRK13590 putative bifunctional 100.0 1.1E-38 2.4E-43 328.9 38.9 343 47-422 178-584 (591)
63 KOG2276 Metalloexopeptidases [ 100.0 1.6E-38 3.5E-43 294.4 27.5 374 37-423 5-469 (473)
64 COG2195 PepD Di- and tripeptid 99.9 4.1E-25 8.8E-30 214.1 20.0 347 50-422 5-409 (414)
65 PF01546 Peptidase_M20: Peptid 99.9 1.4E-22 3.1E-27 180.2 12.1 176 109-423 1-189 (189)
66 COG4187 RocB Arginine degradat 99.8 9.2E-19 2E-23 164.8 17.4 259 50-313 8-323 (553)
67 PRK09961 exoaminopeptidase; Pr 99.8 1.5E-16 3.1E-21 153.7 21.8 246 54-422 4-331 (344)
68 TIGR03106 trio_M42_hydro hydro 99.7 2.5E-16 5.4E-21 151.6 22.8 240 50-422 3-340 (343)
69 PF07687 M20_dimer: Peptidase 99.7 1.6E-17 3.4E-22 134.6 10.9 104 215-318 2-110 (111)
70 PRK10199 alkaline phosphatase 99.7 2.9E-16 6.2E-21 149.0 18.2 131 50-185 35-188 (346)
71 TIGR03107 glu_aminopep glutamy 99.7 9.7E-16 2.1E-20 147.5 21.8 242 54-422 2-339 (350)
72 COG1363 FrvX Cellulase M and r 99.7 9.9E-16 2.1E-20 145.6 21.5 250 50-423 2-345 (355)
73 PRK09864 putative peptidase; P 99.7 1.3E-14 2.7E-19 139.5 23.1 245 53-422 3-339 (356)
74 PF05343 Peptidase_M42: M42 gl 98.9 4.6E-08 1E-12 92.4 14.5 69 338-416 221-292 (292)
75 KOG2194 Aminopeptidases of the 98.6 3.3E-07 7.2E-12 95.1 10.8 133 50-197 57-223 (834)
76 PF04389 Peptidase_M28: Peptid 98.3 1.6E-06 3.6E-11 76.1 6.5 80 107-197 2-87 (179)
77 KOG3946 Glutaminyl cyclase [Po 97.8 0.00055 1.2E-08 62.3 13.7 123 50-184 51-199 (338)
78 KOG2526 Predicted aminopeptida 97.0 0.011 2.3E-07 57.2 12.1 112 74-198 165-304 (555)
79 COG2234 Iap Predicted aminopep 96.7 0.0036 7.9E-08 63.1 7.3 44 142-187 231-275 (435)
80 KOG2195 Transferrin receptor a 96.3 0.012 2.5E-07 61.9 7.6 77 93-185 338-420 (702)
81 PF05450 Nicastrin: Nicastrin; 95.9 0.073 1.6E-06 48.6 10.3 66 106-184 1-73 (234)
82 PF00883 Peptidase_M17: Cytoso 94.6 0.47 1E-05 45.0 11.3 110 53-174 1-140 (311)
83 PRK00913 multifunctional amino 94.5 0.58 1.3E-05 47.4 12.4 124 47-174 168-309 (483)
84 cd00433 Peptidase_M17 Cytosol 94.0 1.1 2.4E-05 45.4 13.1 125 48-174 152-295 (468)
85 PTZ00412 leucyl aminopeptidase 92.1 2.6 5.5E-05 43.1 12.4 122 48-174 210-354 (569)
86 PRK02256 putative aminopeptida 91.8 0.22 4.8E-06 50.1 4.6 76 338-422 380-460 (462)
87 PRK05015 aminopeptidase B; Pro 91.7 3.6 7.8E-05 40.7 12.7 120 50-174 100-246 (424)
88 KOG2597 Predicted aminopeptida 91.5 2 4.3E-05 43.3 10.7 123 50-174 189-330 (513)
89 PRK02813 putative aminopeptida 88.3 0.75 1.6E-05 46.1 5.1 76 338-422 346-426 (428)
90 TIGR01893 aa-his-dipept aminoa 86.4 1.3 2.8E-05 45.2 5.7 44 265-314 336-379 (477)
91 PTZ00371 aspartyl aminopeptida 84.4 1.7 3.7E-05 44.0 5.3 77 337-422 372-453 (465)
92 COG0260 PepB Leucyl aminopepti 83.6 19 0.00041 36.6 12.3 121 48-174 165-308 (485)
93 PF07172 GRP: Glycine rich pro 81.2 0.53 1.2E-05 36.4 0.3 13 1-13 1-13 (95)
94 COG4882 Predicted aminopeptida 76.2 6 0.00013 38.0 5.6 72 93-185 178-259 (486)
95 PF08139 LPAM_1: Prokaryotic m 63.5 6.8 0.00015 22.1 1.9 17 3-19 7-23 (25)
96 PRK14864 putative biofilm stre 61.3 14 0.00031 29.0 4.0 24 66-89 59-82 (104)
97 PF06675 DUF1177: Protein of u 57.2 23 0.0005 32.3 5.1 85 104-198 30-129 (276)
98 PRK02256 putative aminopeptida 56.9 16 0.00035 37.0 4.7 44 133-180 252-298 (462)
99 PRK13883 conjugal transfer pro 53.9 69 0.0015 27.1 7.1 20 70-89 63-82 (151)
100 PRK02813 putative aminopeptida 48.7 19 0.00042 36.1 3.7 43 134-181 227-275 (428)
101 COG2984 ABC-type uncharacteriz 42.6 2.1E+02 0.0045 27.5 9.2 106 59-175 38-172 (322)
102 PF13956 Ibs_toxin: Toxin Ibs, 40.9 20 0.00044 18.4 1.2 12 4-15 2-13 (19)
103 PRK06156 hypothetical protein; 40.3 1.7E+02 0.0037 30.2 9.3 25 268-292 240-264 (520)
104 PRK11372 lysozyme inhibitor; P 37.6 27 0.00057 27.8 2.2 17 1-17 1-17 (109)
105 PHA02291 hypothetical protein 37.4 19 0.00041 28.0 1.2 15 1-15 1-15 (132)
106 PF09940 DUF2172: Domain of un 35.7 1.3E+02 0.0027 29.6 6.8 63 101-185 125-187 (386)
107 PF04114 Gaa1: Gaa1-like, GPI 35.1 1.6E+02 0.0035 30.3 7.9 72 93-185 3-77 (504)
108 cd06406 PB1_P67 A PB1 domain i 33.1 1.5E+02 0.0033 22.1 5.4 58 286-346 8-65 (80)
109 KOG3566 Glycosylphosphatidylin 32.7 4.3E+02 0.0093 27.6 10.1 89 74-184 92-192 (617)
110 PRK10866 outer membrane biogen 32.0 1.6E+02 0.0035 26.9 6.8 15 50-64 49-63 (243)
111 PRK13835 conjugal transfer pro 31.2 1.8E+02 0.004 24.3 6.2 20 70-89 68-87 (145)
112 PF11546 CompInhib_SCIN: Staph 30.0 25 0.00054 27.6 0.8 20 1-20 1-20 (114)
113 PTZ00371 aspartyl aminopeptida 29.0 1.9E+02 0.0041 29.5 7.2 61 56-116 9-89 (465)
114 COG1362 LAP4 Aspartyl aminopep 28.6 1E+02 0.0022 30.7 4.9 76 338-422 354-434 (437)
115 PRK13681 hypothetical protein; 28.0 63 0.0014 19.7 2.1 17 1-17 1-17 (35)
116 PF14133 DUF4300: Domain of un 27.7 2.5E+02 0.0054 26.0 7.1 65 52-118 128-193 (250)
117 COG2195 PepD Di- and tripeptid 27.7 75 0.0016 31.7 4.0 70 106-182 62-141 (414)
118 COG0766 MurA UDP-N-acetylgluco 26.8 2.6E+02 0.0055 27.8 7.2 65 243-311 193-271 (421)
119 PRK15026 aminoacyl-histidine d 26.6 1.3E+02 0.0028 30.8 5.7 43 267-315 344-386 (485)
120 cd06411 PB1_p51 The PB1 domain 25.1 2E+02 0.0044 21.3 4.8 33 285-317 3-35 (78)
121 PF11777 DUF3316: Protein of u 22.1 49 0.0011 26.4 1.3 18 3-20 1-18 (114)
122 PF11153 DUF2931: Protein of u 22.0 68 0.0015 28.8 2.3 18 3-20 1-18 (216)
123 COG0065 LeuC 3-isopropylmalate 21.9 3.8E+02 0.0083 26.5 7.3 38 134-173 298-335 (423)
124 PF10829 DUF2554: Protein of u 20.9 2.2E+02 0.0048 20.6 4.1 18 3-20 2-19 (76)
125 COG1360 MotB Flagellar motor p 20.7 3.1E+02 0.0068 25.1 6.4 54 107-174 165-219 (244)
126 PRK13731 conjugal transfer sur 20.6 59 0.0013 29.6 1.5 32 59-90 54-86 (243)
127 PF07438 DUF1514: Protein of u 20.2 3.2E+02 0.0068 19.4 4.7 13 55-67 37-49 (66)
128 TIGR03516 ppisom_GldI peptidyl 20.1 2.3E+02 0.0049 24.7 5.1 23 50-77 35-57 (177)
No 1
>PLN02280 IAA-amino acid hydrolase
Probab=100.00 E-value=6.7e-62 Score=487.57 Aligned_cols=376 Identities=59% Similarity=1.016 Sum_probs=333.1
Q ss_pred hhHHHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEecccCceEEEEECCCCCcEEEEEEecccccCcCCCCCc
Q 014490 47 EIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWE 126 (423)
Q Consensus 47 ~~~~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~~~~~~ill~~H~Dtvp~~~~~~w~ 126 (423)
+.++.+.++.++++++|+++++|.++++||.++|+++|++++....++|++++++++++|+|+|.|||||||+++..+|+
T Consensus 94 ~~~~~l~~l~r~lh~~PEls~~E~~t~~~i~~~L~~~G~~~~~~~~~~~vva~~g~~~~~~I~l~gh~DaVP~~e~~~w~ 173 (478)
T PLN02280 94 DTVAWLKSVRRKIHENPELAFEEYKTSELVRSELDRMGIMYRYPLAKTGIRAWIGTGGPPFVAVRADMDALPIQEAVEWE 173 (478)
T ss_pred HHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHCCCeEEecCCCCEEEEEECCCCCCEEEEEEecCCCcccCCCCCC
Confidence 44578889999999999999999999999999999999998876678899999954445999999999999998888899
Q ss_pred ccCCCCCccccCCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCcccHHHHHhcCCCcccceeeeeccCCCCCCc
Q 014490 127 HKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSLFPVG 206 (423)
Q Consensus 127 ~~~~~~g~~~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg~~Ga~~~~~~~~~~~~d~~i~~~~~~~~p~g 206 (423)
++.+++|++||||+|++++++|+|+++|++.+.+++++|.|+|+++||.+.|+++++++|.+++.|+++++|+.+.+|.+
T Consensus 174 ~~p~~~G~~h~cGhd~~~A~~l~a~~~L~~~~~~~~g~V~~if~pdEE~g~Ga~~li~~g~~~~~d~~~~~h~~~~~p~g 253 (478)
T PLN02280 174 HKSKVAGKMHACGHDAHVAMLLGAAKILKSREHLLKGTVVLLFQPAEEAGNGAKRMIGDGALDDVEAIFAVHVSHEHPTA 253 (478)
T ss_pred CCCCCCCeEEeCCCcHHHHHHHHHHHHHHhccccCCceEEEEecccccccchHHHHHHCCCCcCCCEEEEEecCCCCCCc
Confidence 99999999999999999999999999999887778999999999999955699999999988888999999987777888
Q ss_pred eEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEecCCCCccCCCc
Q 014490 207 TVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDS 286 (423)
Q Consensus 207 ~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gg~~~n~iP~~ 286 (423)
.+..+.+...+|..+++|+++|+++|++.|+.|+|||..+++++..|+.+..+..++....+++++.|+||...|+||++
T Consensus 254 ~ig~~~~~~~~G~~~~~I~v~Gk~aHas~P~~G~NAI~~aa~li~~l~~l~~r~~~~~~~~tvnvg~I~GG~~~NvIPd~ 333 (478)
T PLN02280 254 VIGSRPGPLLAGCGFFRAVISGKKGRAGSPHHSVDLILAASAAVISLQGIVSREANPLDSQVVSVTTMDGGNNLDMIPDT 333 (478)
T ss_pred eeEecccccccceeEEEEEEECcchhcCCcccCcCHHHHHHHHHHHHHHHHhcccCCCCCcEEEEEEEEccCCCCEeCCE
Confidence 88878788888999999999999999999999999999999999999998766555556789999999999999999999
Q ss_pred EEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeec--cCCCCccccCHHHHHHHHHHHHHhcCCcccccCCC
Q 014490 287 VTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDD--KSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRP 364 (423)
Q Consensus 287 a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~l~~~~~~~~g~~~~~~~~~ 364 (423)
|++.+|+|++|.++.+++.++|++++++.+..+++++++++.. ...++++.+++++++.+++++.+.+|.+.+....+
T Consensus 334 ~~l~~diR~~~~e~~e~l~~~I~~~~~~~a~~~g~~~~v~~~~~~~~~~pp~~n~~~l~~~~~~~a~~~~G~~~~~~~~~ 413 (478)
T PLN02280 334 VVLGGTFRAFSNTSFYQLLKRIQEVIVEQAGVFRCSATVDFFEKQNTIYPPTVNNDAMYEHVRKVAIDLLGPANFTVVPP 413 (478)
T ss_pred EEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEeccccCCCCCccCCHHHHHHHHHHHHHhcCccccccCCC
Confidence 9999999999999999999999999999888888877776521 24578888899999999999888777653322235
Q ss_pred CCCCchHHHHHhhcCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 365 LMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 365 ~~g~tD~~~~~~~ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
.+|++|+++|.+.+|++++++|+.+.+||+...+|+++|++++++|..++++|+.++.
T Consensus 414 ~~g~tD~~~~~~~vP~i~~glG~~~~~~G~~~~~Htp~e~id~~~L~~~~~~~~~~~~ 471 (478)
T PLN02280 414 MMGAEDFSFYSQVVPAAFYYIGIRNETLGSTHTGHSPYFMIDEDVLPIGAAVHAAIAE 471 (478)
T ss_pred CeeechHHHHHhhCCEEEEEEeecCCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHH
Confidence 6899999999988999999889876556776789999999999999999999999875
No 2
>PLN02693 IAA-amino acid hydrolase
Probab=100.00 E-value=4.1e-60 Score=471.99 Aligned_cols=388 Identities=65% Similarity=1.094 Sum_probs=335.2
Q ss_pred ccccchHHHHhhcCchhHHHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEecccCceEEEEECCCCCcEEEEE
Q 014490 32 LTQIPVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALR 111 (423)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~~~~~~ill~ 111 (423)
-+++..++.+...+.+..+++++++++|+++|++|++|.++++||.++|+++|++++....++||+|.++++++|+|+|.
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~r~~lh~~PE~s~~E~~ta~~i~~~L~~~G~~~~~~~~~~~via~~g~~~g~~i~l~ 108 (437)
T PLN02693 29 VSQIQINLLELAKSPEVFDWMVRIRRKIHENPELGYEEFETSKLIRSELDLIGIKYRYPVAITGIIGYIGTGEPPFVALR 108 (437)
T ss_pred hhhhHHHHHHHhhhhhhHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHCCCeeEecCCCcEEEEEECCCCCCEEEEE
Confidence 34556666666665334478999999999999999999999999999999999997764568999999965556999999
Q ss_pred EecccccCcCCCCCcccCCCCCccccCCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCcccHHHHHhcCCCccc
Q 014490 112 ADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENV 191 (423)
Q Consensus 112 ~H~Dtvp~~~~~~w~~~~~~~g~~~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg~~Ga~~~~~~~~~~~~ 191 (423)
|||||||+++..+|++++..+|++||||+|++++++|+|+++|++.+..++++|.|+|+++||++.|++.++++|.+++.
T Consensus 109 ~h~DaVp~~e~~~~~~~p~~~G~~hacGhkg~~A~~l~Aa~~L~~~~~~~~g~V~~if~pdEE~~~Ga~~~i~~g~~~~~ 188 (437)
T PLN02693 109 ADMDALPIQEAVEWEHKSKIPGKMHACGHDGHVAMLLGAAKILQEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNV 188 (437)
T ss_pred eecCCCcCCCCCCCCCCCCCCCCEECCcchHHHHHHHHHHHHHHhCcccCCceEEEEEEEcccchhhHHHHHHCCCCCCC
Confidence 99999999888889999888999999999999999999999999887677899999999999976799999999988777
Q ss_pred ceeeeeccCCCCCCceEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhcccCCCCCCceEEE
Q 014490 192 EAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTV 271 (423)
Q Consensus 192 d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v 271 (423)
+++++.|.++..+.|.+..+.|..++|..+++|+++|+++|++.|+.|+|||..+++++.+|+++..+..++....++++
T Consensus 189 ~~iig~h~~p~~~~g~~~~~~g~~~~G~~~~~i~v~Gk~aHaa~P~~G~nAI~~aa~~i~~l~~~~~~~~~~~~~~ti~v 268 (437)
T PLN02693 189 EAIFGIHLSPRTPFGKAASRAGSFMAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVVTV 268 (437)
T ss_pred CEEEEEecCCCCCCeeEEeccCcccccceEEEEEEEcccccCCCCCCCcCHHHHHHHHHHHHHHHhcccCCCCCCcEEEE
Confidence 89999998887778888788888888999999999999999999999999999999999999998766556666789999
Q ss_pred EEEecCCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeec--cCCCCccccCHHHHHHHHHH
Q 014490 272 AKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDD--KSFYPVTVNNKNLHEHFQKV 349 (423)
Q Consensus 272 ~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~l~~~ 349 (423)
+.|+||...|+||++|++.+|+|+.|.+ +.+.++|++++++.+..+++++++++.. .+++++..+|+++++.++++
T Consensus 269 g~i~GG~~~NvVPd~a~~~~diR~~~~~--~~i~~~i~~i~~~~a~~~g~~~e~~~~~~~~~~~~~~~nd~~l~~~~~~~ 346 (437)
T PLN02693 269 SKVNGGNAFNVIPDSITIGGTLRAFTGF--TQLQQRIKEIITKQAAVHRCNASVNLTPNGREPMPPTVNNMDLYKQFKKV 346 (437)
T ss_pred EEEEcCCCCceECCeEEEEEEEecCCHH--HHHHHHHHHHHHHHHHHhCCcEEEEEeecCccCCCCccCCHHHHHHHHHH
Confidence 9999999999999999999999999975 5799999999998887778777776531 24567778888999999999
Q ss_pred HHHhcCCcccccCCCCCCCchHHHHHhhcCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 350 AADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 350 ~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
+++.+|.+.+......+|++|+++|.+.+|.+++.+|+.+.. .+....|+++|+++.+.|..++++|+.++.
T Consensus 347 ~~~~~G~~~~~~~~~~~gseDf~~~~~~vP~~~~~lG~~~~~-~~~~~~H~~~f~~de~~l~~~~~~~~~~~~ 418 (437)
T PLN02693 347 VRDLLGQEAFVEAAPEMGSEDFSYFAETIPGHFSLLGMQDET-NGYASSHSPLYRINEDVLPYGAAIHATMAV 418 (437)
T ss_pred HHHhcCCcceeecCCCceechHHHHHHHhhhhEEEEecCCCC-CCCCCCCCCCcCCCHHHHHHHHHHHHHHHH
Confidence 999888765433345679999999999999998888876421 012469999999999999999999998775
No 3
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=2e-55 Score=434.02 Aligned_cols=353 Identities=20% Similarity=0.232 Sum_probs=296.4
Q ss_pred HHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEec---ccCceEEEEECCCCCcEEEEEEecccccCcCCCCCc
Q 014490 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP---VAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWE 126 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~---~~~~nvia~~~~~~~~~ill~~H~Dtvp~~~~~~w~ 126 (423)
++.++++++|+++||+|++|.++++||.++|+++|++++.. +.++|++++++++ +|+|+|++|+||||+++...|.
T Consensus 2 ~~~~~~l~~Lv~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~l~a~~g~~-~~~il~~~H~DtVp~~~~~~w~ 80 (377)
T PRK08588 2 EEKIQILADIVKINSVNDNEIEVANYLQDLFAKHGIESKIVKVNDGRANLVAEIGSG-SPVLALSGHMDVVAAGDVDKWT 80 (377)
T ss_pred hHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHCCCceEEEecCCCCceEEEEeCCC-CceEEEEeeecccCCCCcccCc
Confidence 57889999999999999999999999999999999997652 4578999999544 4999999999999998878895
Q ss_pred c---c-CCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHhcCCCcccceeeeec
Q 014490 127 H---K-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLH 198 (423)
Q Consensus 127 ~---~-~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~~~~~~~~~~d~~i~~~ 198 (423)
+ . .++||++||||+ |++++++|.|+++|++.+..++++|.|+|+++|| |+.|++++++++.++++|++++.
T Consensus 81 ~~Pf~~~~~~g~l~GrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i~l~~~~dEE~g~~G~~~~~~~~~~~~~d~~i~~- 159 (377)
T PRK08588 81 YDPFELTEKDGKLYGRGATDMKSGLAALVIAMIELKEQGQLLNGTIRLLATAGEEVGELGAKQLTEKGYADDLDALIIG- 159 (377)
T ss_pred CCCCCeEEECCEEEecCcccccchHHHHHHHHHHHHHcCCCCCCcEEEEEEcccccCchhHHHHHhcCccCCCCEEEEe-
Confidence 4 3 467899999998 8999999999999999887889999999999999 77899999999877777877653
Q ss_pred cCCCCCCceEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhcccC---CCCCCceEEEEEEe
Q 014490 199 VSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREA---DPLDSQVLTVAKFE 275 (423)
Q Consensus 199 ~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~---~~~~~~t~~v~~i~ 275 (423)
+|++.. ...+++|..+++|+++|+++|+|.|+.|.|||..+++++..|+.+..+.. +..+..+++++.|+
T Consensus 160 ----ep~~~~---i~~~~~G~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~t~~v~~i~ 232 (377)
T PRK08588 160 ----EPSGHG---IVYAHKGSMDYKVTSTGKAAHSSMPELGVNAIDPLLEFYNEQKEYFDSIKKHNPYLGGLTHVVTIIN 232 (377)
T ss_pred ----cCCCce---eEEEEEEEEEEEEEEEeechhccCCccccCHHHHHHHHHHHHHHHhhhhcccCccCCCCceeeeEEe
Confidence 233221 12345799999999999999999999999999999999999988753221 23456899999999
Q ss_pred cCCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCcc--ccCHHHHHHHHHHHHHh
Q 014490 276 GGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVT--VNNKNLHEHFQKVAADM 353 (423)
Q Consensus 276 gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~~~~~~l~~~~~~~ 353 (423)
||...|+||++|++.+|+|+.|+++.+++.++|++++++.+...+++++++. ...++|+ +.++++++.+++++++.
T Consensus 233 gG~~~nvip~~~~~~~d~R~~p~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~--~~~~~p~~~~~~~~l~~~~~~~~~~~ 310 (377)
T PRK08588 233 GGEQVNSVPDEAELEFNIRTIPEYDNDQVISLLQEIINEVNQNGAAQLSLDI--YSNHRPVASDKDSKLVQLAKDVAKSY 310 (377)
T ss_pred CCCcCCcCCCeEEEEEEeccCCCCCHHHHHHHHHHHHHHHhhccCCceEEEE--ecCCCCcCCCCCCHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999987765566777776 3344554 34578999999999998
Q ss_pred cCCcccccCCCCCCCchHHHHHhh---cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 354 LGVQNIKENRPLMGTEDFSFFAEA---IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 354 ~g~~~~~~~~~~~g~tD~~~~~~~---ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
+|.++ .....+|++|+++|... +|++. +| ||+...+|++||++++++|.+++++|+.++.
T Consensus 311 ~g~~~--~~~~~~g~tD~~~~~~~~~~ip~i~--~G-----pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~ 373 (377)
T PRK08588 311 VGQDI--PLSAIPGATDASSFLKKKPDFPVII--FG-----PGNNLTAHQVDEYVEKDMYLKFIDIYKEIII 373 (377)
T ss_pred hCCCC--ceecCCCcccHHHHhhhcCCCCEEE--EC-----CCCCccCCCCCceeEHHHHHHHHHHHHHHHH
Confidence 88755 33567899999999854 45443 56 4544679999999999999999999999885
No 4
>COG1473 AbgB Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only]
Probab=100.00 E-value=3.8e-54 Score=416.02 Aligned_cols=370 Identities=44% Similarity=0.716 Sum_probs=338.3
Q ss_pred HHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEeccc-CceEEEEECCC-CCcEEEEEEecccccCcCCCCCcc
Q 014490 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVA-VTGVVGYIGTG-QPPFVALRADMDALAMEESVEWEH 127 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~~~-~~nvia~~~~~-~~~~ill~~H~Dtvp~~~~~~w~~ 127 (423)
++++++.|+|+++|++|++|.++++||.++|+++|+++..... ++.++|.++++ ++|+|.|.+.||.+|..+..+++|
T Consensus 12 ~~l~~~rr~lH~~PEL~f~E~~Ta~~i~~~L~~~g~~~~~~~~~~TGvva~~~~g~~g~tIalRAD~DALPi~E~t~~~~ 91 (392)
T COG1473 12 DELIEWRRDLHEHPELGFEEYRTAAYIAEKLEELGFEVVEVGGGKTGVVATLKGGKPGPTIALRADMDALPIQEETGLPF 91 (392)
T ss_pred HHHHHHHHHHhhCCccchhHHHHHHHHHHHHHHcCCeeEeccCCceEEEEEEcCCCCCCEEEEEeecccCccccccCCCc
Confidence 8899999999999999999999999999999999999544443 68999999765 468999999999999999999999
Q ss_pred cCCCCCccccCCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCcccHHHHHhcCCCcc-cceeeeeccCCCCCCc
Q 014490 128 KSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGGGAKKMLDAGALEN-VEAIFGLHVSSLFPVG 206 (423)
Q Consensus 128 ~~~~~g~~~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg~~Ga~~~~~~~~~~~-~d~~i~~~~~~~~p~g 206 (423)
.++.+|++|+||++++.+++|+++++|++...+++++|+|+|+++||++.|++.|+++|.+++ +|+++++|+.|+.|.|
T Consensus 92 ~S~~~G~mHACGHD~Hta~lLgaA~~L~~~~~~~~Gtv~~ifQPAEE~~~Ga~~mi~~G~~~~~vD~v~g~H~~p~~~~g 171 (392)
T COG1473 92 ASKNPGVMHACGHDGHTAILLGAALALAEHKDNLPGTVRLIFQPAEEGGGGAKAMIEDGVFDDFVDAVFGLHPGPGLPVG 171 (392)
T ss_pred ccCCCCCcccCCchHHHHHHHHHHHHHHhhhhhCCcEEEEEecccccccccHHHHHhcCCccccccEEEEecCCCCCCCc
Confidence 999999999999999999999999999988668999999999999996669999999999998 9999999998877899
Q ss_pred eEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEecCCCCccCCCc
Q 014490 207 TVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDS 286 (423)
Q Consensus 207 ~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gg~~~n~iP~~ 286 (423)
++.+++|....+...|+++++|+++|++.|+.++||+..++.++..|+.+.+|..+|.....++++.++||.+.|+||+.
T Consensus 172 ~v~~~~G~~~aa~d~~~i~~~GkggH~a~Ph~~~d~i~aa~~~v~~lq~ivsr~~~p~~~~vv~vg~~~aG~a~NVIpd~ 251 (392)
T COG1473 172 TVALRPGALMAAADEFEITFKGKGGHAAAPHLGIDALVAAAQLVTALQTIVSRNVDPLDSAVVTVGKIEAGTAANVIPDS 251 (392)
T ss_pred eEEeecccceeecceEEEEEEeCCcccCCcccccCHHHHHHHHHHHHHHHHhcccCCccCeEEEEEEecCCCcCCcCCCe
Confidence 99999998888999999999999999999999999999999999999999999999888899999999999999999999
Q ss_pred EEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCccccCHHHHHHHHHHHHHhcCCccc--ccCCC
Q 014490 287 VTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNI--KENRP 364 (423)
Q Consensus 287 a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~g~~~~--~~~~~ 364 (423)
+++..++|.+..+..+.+.++|+++++..+..+++++++.+ ...+|++.+|+.+.+.+++++++..|...+ .....
T Consensus 252 A~l~gtvR~~~~~~~~~~~~~i~~ia~g~a~~~g~~~ei~~--~~~~p~~~Nd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (392)
T COG1473 252 AELEGTIRTFSDEVREKLEARIERIAKGIAAAYGAEAEIDY--ERGYPPVVNDPALTDLLAEAAEEVGGEEVVVVELPPS 329 (392)
T ss_pred eEEEEEeecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEe--cCCCCCccCCHHHHHHHHHHHHHhccccceecccCCC
Confidence 99999999999999999999999999999999999999999 889999999999999999999999774432 12223
Q ss_pred CCCCchHHHHHhhcCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 365 LMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 365 ~~g~tD~~~~~~~ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
..||+|+++|.+.+|..++.+|....+ +.....|+|...++.+.+..+++++..+++
T Consensus 330 ~~gsEDf~~~~~~~Pg~~~~lG~~~~~-~~~~~~H~p~~~~de~~l~~g~~~~~~~~~ 386 (392)
T COG1473 330 MAGSEDFGYYLEKVPGAFFFLGTGSAD-GGTYPLHHPKFDFDEAALATGVKLLAALAL 386 (392)
T ss_pred CCccchHHHHHHhCCeeEEEeecCcCC-CCcccccCCcCCCCHHHHHHHHHHHHHHHH
Confidence 459999999999999999989976543 113459999999999999999999988765
No 5
>PRK06915 acetylornithine deacetylase; Validated
Probab=100.00 E-value=5.9e-55 Score=436.74 Aligned_cols=367 Identities=18% Similarity=0.246 Sum_probs=302.6
Q ss_pred cchHHHHhhcCchhHHHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEec--------------------ccCc
Q 014490 35 IPVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP--------------------VAVT 94 (423)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~--------------------~~~~ 94 (423)
..+++.+++++++ +++++++++|++|||+|++|.++++||+++|+++|++++.. ..++
T Consensus 4 ~~~~~~~~~~~~~--~~~~~~l~~lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (422)
T PRK06915 4 LKKQICDYIESHE--EEAVKLLKRLIQEKSVSGDESGAQAIVIEKLRELGLDLDIWEPSFKKLKDHPYFVSPRTSFSDSP 81 (422)
T ss_pred HHHHHHHHHHhhH--HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhcCCeeEEeecchhhhhcccccCCcccccCCCc
Confidence 4667888899887 89999999999999999999999999999999999997531 2469
Q ss_pred eEEEEECCC-CCcEEEEEEecccccCcCCCCCc---cc-CCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEE
Q 014490 95 GVVGYIGTG-QPPFVALRADMDALAMEESVEWE---HK-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIV 166 (423)
Q Consensus 95 nvia~~~~~-~~~~ill~~H~Dtvp~~~~~~w~---~~-~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~ 166 (423)
||++++++. ++|+|+|+|||||||+++...|+ |. .++||++||||+ ||+++++|.|+++|++.+.+++++|.
T Consensus 82 nlia~~~g~~~~~~l~l~~H~Dtvp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~v~ 161 (422)
T PRK06915 82 NIVATLKGSGGGKSMILNGHIDVVPEGDVNQWDHHPYSGEVIGGRIYGRGTTDMKGGNVALLLAMEALIESGIELKGDVI 161 (422)
T ss_pred eEEEEEcCCCCCCeEEEEeeccccCCCCcccCcCCCCCceEECCEEEecCcccchHHHHHHHHHHHHHHHcCCCCCCcEE
Confidence 999999653 46899999999999999888895 44 357899999998 89999999999999988878889999
Q ss_pred EEEecCCC-CcccHHHHHhcCCCcccceeeeeccCCCCCCceEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHH
Q 014490 167 LVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVA 245 (423)
Q Consensus 167 ~~~~~~EE-g~~Ga~~~~~~~~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~ 245 (423)
|+|+++|| |+.|+..++..+. ..|++++ ++|++. ....+++|..+++|+++|+++|+|.|+.|.|||..
T Consensus 162 ~~~~~dEE~g~~G~~~~~~~~~--~~d~~i~-----~ep~~~---~i~~~~~G~~~~~i~v~G~~~H~s~p~~g~nAi~~ 231 (422)
T PRK06915 162 FQSVIEEESGGAGTLAAILRGY--KADGAII-----PEPTNM---KFFPKQQGSMWFRLHVKGKAAHGGTRYEGVSAIEK 231 (422)
T ss_pred EEEecccccCCcchHHHHhcCc--CCCEEEE-----CCCCCc---cceeecccEEEEEEEEEeeccccCCCCcCcCHHHH
Confidence 99999999 7789888887764 4577775 345553 22356789999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcc----cCCCC-----CCceEEEEEEecCCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHH
Q 014490 246 ASNVIVSLQHLVSR----EADPL-----DSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQA 316 (423)
Q Consensus 246 ~~~~i~~l~~~~~~----~~~~~-----~~~t~~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~ 316 (423)
+++++..|+.+... ..++. .+.++|++.|+||...|+||+.|++.+|+|+.|.++.+++.++|++.+++.+
T Consensus 232 ~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~t~~v~~i~gG~~~nvvP~~a~~~~d~R~~p~~~~~~v~~~i~~~l~~~~ 311 (422)
T PRK06915 232 SMFVIDHLRKLEEKRNDRITDPLYKGIPIPIPINIGKIEGGSWPSSVPDSVILEGRCGIAPNETIEAAKEEFENWIAELN 311 (422)
T ss_pred HHHHHHHHHHHHHHhccccCCCcccCCCCCceEeEEEeeCCCCCCccCcEEEEEEEEEECCCCCHHHHHHHHHHHHHHHh
Confidence 99999999987532 11221 2358999999999999999999999999999999999999999999998876
Q ss_pred Hhc----CCeEEEEeeccC-CCCccccCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhh--cCeEEEEeccCC
Q 014490 317 SVQ----RCNATVTFDDKS-FYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA--IPGYFYYLGMND 389 (423)
Q Consensus 317 ~~~----~~~~~~~~~~~~-~~~~~~~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~--ip~~~~~~g~~~ 389 (423)
... +..+++++.... ...+++.|+++++.+++++++++|.++. ....+|++|+++|.+. +|++++ |
T Consensus 312 ~~~~~~~~~~~~v~~~~~~~~~~~~~~d~~lv~~l~~a~~~~~G~~~~--~~~~~g~tD~~~~~~~~giP~v~f--G--- 384 (422)
T PRK06915 312 DVDEWFVEHPVEVEWFGARWVPGELEENHPLMTTLEHNFVEIEGNKPI--IEASPWGTDGGLLTQIAGVPTIVF--G--- 384 (422)
T ss_pred ccChhhhcCCceEEeecccCCcccCCCCCHHHHHHHHHHHHHhCCCCe--eceeeeeccHHHHhccCCCCEEEE--C---
Confidence 532 223444432111 1123456789999999999998888663 3467789999999985 898665 5
Q ss_pred CCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 390 ETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 390 ~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
||....+|++||++++++|.+++++|+.++.
T Consensus 385 --pg~~~~aH~~dE~v~~~~l~~~~~~~~~ll~ 415 (422)
T PRK06915 385 --PGETKVAHYPNEYIEVDKMIAAAKIIALTLL 415 (422)
T ss_pred --CCCccccCCCCceeEHHHHHHHHHHHHHHHH
Confidence 4444579999999999999999999999875
No 6
>TIGR01891 amidohydrolases amidohydrolase. This model represents a subfamily of amidohydrolases which are a subset of those sequences detected by pfam01546. Included within this group are hydrolases of hippurate (N-benzylglycine), indoleacetic acid (IAA) N-conjugates of amino acids, N-acetyl-L-amino acids and aminobenzoylglutamate. These hydrolases are of the carboxypeptidase-type, most likely utilizing a zinc ion in the active site.
Probab=100.00 E-value=9.7e-53 Score=412.48 Aligned_cols=356 Identities=44% Similarity=0.753 Sum_probs=300.2
Q ss_pred HHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEe-cccCceEEEEECCC-CCcEEEEEEecccccCcCCCCCcccCC
Q 014490 53 VNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKF-PVAVTGVVGYIGTG-QPPFVALRADMDALAMEESVEWEHKSK 130 (423)
Q Consensus 53 ~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~-~~~~~nvia~~~~~-~~~~ill~~H~Dtvp~~~~~~w~~~~~ 130 (423)
.+++++|++|||+|++|.++++||.++|+++|++++. .....|++++++++ ++|+|+|.||+||||.++...+||...
T Consensus 2 ~~~~~~L~~ips~s~~E~~~a~~l~~~l~~~g~~~~~~~~~~~~vva~~~~~~~~~~i~l~gH~DtVp~~~~~~~pf~~~ 81 (363)
T TIGR01891 2 TDIRRHLHEHPELSFEEFKTSSLIAEALESLGIEVRRGVGGATGVVATIGGGKPGPVVALRADMDALPIQEQTDLPYKST 81 (363)
T ss_pred hHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCceEecCCCCcEEEEEEeCCCCCCEEEEEeccCCCCcccccCCCcccC
Confidence 4789999999999999999999999999999999876 44578999999754 459999999999999877656677756
Q ss_pred CCCccccCCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCcccHHHHHhcCCCcccceeeeeccCCCCCCceEEe
Q 014490 131 VPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVAS 210 (423)
Q Consensus 131 ~~g~~~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg~~Ga~~~~~~~~~~~~d~~i~~~~~~~~p~g~~~~ 210 (423)
+||++||||+|+++++++.|++.|++.+..++++|.|+|++|||.+.|++++++++.+++.|+++++++.+..+.+.+..
T Consensus 82 ~~g~l~g~G~~~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~G~~~~~~~~~~~~~d~~i~~e~~~~~~~~~~~~ 161 (363)
T TIGR01891 82 NPGVMHACGHDLHTAILLGTAKLLKKLADLLEGTVRLIFQPAEEGGGGATKMIEDGVLDDVDAILGLHPDPSIPAGTVGL 161 (363)
T ss_pred CCCceecCcCHHHHHHHHHHHHHHHhchhhCCceEEEEEeecCcCcchHHHHHHCCCCCCcCEEEEECCCCCCCCeEEEE
Confidence 78999999999999999999999988776788999999999999658999999888777788999888766667777666
Q ss_pred ecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEecCCCCccCCCcEEEE
Q 014490 211 RPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIG 290 (423)
Q Consensus 211 ~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gg~~~n~iP~~a~~~ 290 (423)
..+..++|+.+++++++|+++|++.|+.|.||+..|++++.+|+++.....++....+++++.|+||...|+||++|++.
T Consensus 162 ~~~~~~~g~~~~~i~~~G~~~Has~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~gG~~~nvvP~~~~~~ 241 (363)
T TIGR01891 162 RPGTIMAAADKFEVTIHGKGAHAARPHLGRDALDAAAQLVVALQQIVSRNVDPSRPAVVTVGIIEAGGAPNVIPDKASMS 241 (363)
T ss_pred CCCcceeecceEEEEEEeecccccCcccccCHHHHHHHHHHHHHHHhhccCCCCCCcEEEEEEEEcCCCCcEECCeeEEE
Confidence 66778889999999999999999999999999999999999998864332233345789999999999999999999999
Q ss_pred EEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCccccCHHHHHHHHHHHHHhcCCccc-ccCCCCCCCc
Q 014490 291 GTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNI-KENRPLMGTE 369 (423)
Q Consensus 291 ~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~g~~~~-~~~~~~~g~t 369 (423)
+|+|+.|.++.+++.++|++++++.+.+.+.+++++. ...+|+...++++++.+++++++.+|..+. ..+..++|++
T Consensus 242 ~diR~~~~~~~e~~~~~i~~~~~~~~~~~~~~ve~~~--~~~~p~~~~~~~l~~~l~~a~~~~~g~~~~~~~~~~~~gg~ 319 (363)
T TIGR01891 242 GTVRSLDPEVRDQIIDRIERIVEGAAAMYGAKVELNY--DRGLPAVTNDPALTQILKEVARHVVGPENVAEDPEVTMGSE 319 (363)
T ss_pred EEEEeCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEE--ecCCCCccCCHHHHHHHHHHHHHhcCccceeccCCCCcccc
Confidence 9999999999999999999999998877788888876 335555666789999999999997785432 1234688999
Q ss_pred hHHHHHhhcCeEEEEeccCCCCCCCCCCCCCCCccCCCCch
Q 014490 370 DFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDAL 410 (423)
Q Consensus 370 D~~~~~~~ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l 410 (423)
|++++.+.+|++++++|..+.+-++....|++++-.+.+-+
T Consensus 320 Da~~~~~~~P~~~~f~~~~~~~~~~~~~~h~~~~~~~~~~~ 360 (363)
T TIGR01891 320 DFAYYSQKVPGAFFFLGIGNEGTGLSHPLHHPRFDIDEEAL 360 (363)
T ss_pred CHHHHHHhCCeeEEEEecCCCCCCCCCCCCCCCCcCChHHh
Confidence 99999988999988888765321234578999887765543
No 7
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=4.9e-53 Score=423.78 Aligned_cols=365 Identities=15% Similarity=0.156 Sum_probs=292.5
Q ss_pred hHHHHhhcCchhHHHHHHHHHHhHhCCCCC--C-CcHHHHHHHHHHHHhCCCCeEecc-----------cCceEEEEECC
Q 014490 37 VKFLDFAKKPEIFYWMVNIRRKIHENPELG--F-QEFETSKLIRAELDQMGIPYKFPV-----------AVTGVVGYIGT 102 (423)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~l~~ips~s--~-~E~~~~~~l~~~l~~~g~~~~~~~-----------~~~nvia~~~~ 102 (423)
+++.++++.++ +++++++++|++|||++ + +|.++++||.++|+++|++++... .++|++|++++
T Consensus 3 ~~~~~~~~~~~--~~~~~~l~~Lv~i~S~~~~g~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~nlia~~~g 80 (427)
T PRK13013 3 DRLFAAIEARR--DDLVALTQDLIRIPTLNPPGRAYREICEFLAARLAPRGFEVELIRAEGAPGDSETYPRWNLVARRQG 80 (427)
T ss_pred HHHHHHHHHhH--HHHHHHHHHHhcCCCcCCCCccHHHHHHHHHHHHHHCCCceEEEecCCCCcccccCCcceEEEEecC
Confidence 35777777777 89999999999999987 3 468999999999999999987531 15699999965
Q ss_pred C-CCcEEEEEEecccccCcCCCCCc---cc-CCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 014490 103 G-QPPFVALRADMDALAMEESVEWE---HK-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (423)
Q Consensus 103 ~-~~~~ill~~H~Dtvp~~~~~~w~---~~-~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE 174 (423)
+ ++|+|+|+||+||||+++ .|+ |. .++||+|||||+ ||+++++|+|+++|++.+.+++++|.|+|+++||
T Consensus 81 ~~~~~~i~l~gH~DvVp~~~--~W~~~Pf~~~~~dg~iyGrGa~D~Kg~~aa~l~a~~~l~~~~~~~~~~v~~~~~~dEE 158 (427)
T PRK13013 81 ARDGDCVHFNSHHDVVEVGH--GWTRDPFGGEVKDGRIYGRGACDMKGGLAASIIAAEAFLAVYPDFAGSIEISGTADEE 158 (427)
T ss_pred CCCCCEEEEEeccccCCCCC--CCcCCCCCceEECCEEEeccccccchHHHHHHHHHHHHHHhCCCCCccEEEEEEeccc
Confidence 3 458999999999999874 574 54 467899999998 8999999999999999887889999999999999
Q ss_pred -Cc-ccHHHHHhcCCCc--ccceeeeeccCCCCCCceEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHH
Q 014490 175 -GG-GGAKKMLDAGALE--NVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVI 250 (423)
Q Consensus 175 -g~-~Ga~~~~~~~~~~--~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i 250 (423)
|+ .|.+++++++.+. .+|++++. +|++... ..++++|..+++|+++|+++|++.|+.|.|||..++++|
T Consensus 159 ~g~~~g~~~l~~~~~~~~~~~d~~i~~-----ep~~~~~--i~~~~~G~~~~~i~v~G~~~H~~~p~~g~nai~~~~~~l 231 (427)
T PRK13013 159 SGGFGGVAYLAEQGRFSPDRVQHVIIP-----EPLNKDR--ICLGHRGVWWAEVETRGRIAHGSMPFLGDSAIRHMGAVL 231 (427)
T ss_pred cCChhHHHHHHhcCCccccCCCEEEEe-----cCCCCCc--eEEeeeeEEEEEEEEEccccccCCCCcCcCHHHHHHHHH
Confidence 55 4778888887665 45777753 3443211 123467999999999999999999999999999999999
Q ss_pred HHHHHhhccc-----C------CCCCCceEEEEEEecCCCC----------ccCCCcEEEEEEEecCChhhHHHHHHHHH
Q 014490 251 VSLQHLVSRE-----A------DPLDSQVLTVAKFEGGGAF----------NIIPDSVTIGGTFRAFSKESIIQLKQRIE 309 (423)
Q Consensus 251 ~~l~~~~~~~-----~------~~~~~~t~~v~~i~gg~~~----------n~iP~~a~~~~d~R~~~~~~~~~v~~~i~ 309 (423)
.+|+++..+. . +....+++|++.|+||... |+||++|++++|+|+.|+++.+++.++|+
T Consensus 232 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~t~~v~~i~gG~~~~~~~~~~~~~n~IPd~a~~~idiR~~p~~~~~~v~~~i~ 311 (427)
T PRK13013 232 AEIEERLFPLLATRRTAMPVVPEGARQSTLNINSIHGGEPEQDPDYTGLPAPCVADRCRIVIDRRFLIEEDLDEVKAEIT 311 (427)
T ss_pred HHHHHHhhhhhhcccccCCCCCcccCCCceeeeEEeCCCccccccccccccccCCceEEEEEEEEeCCCCCHHHHHHHHH
Confidence 9997653110 0 0113578999999999766 99999999999999999999999999999
Q ss_pred HHHHHHHHhc-CCeEEEEeeccCCCCcc--ccCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhh--cCeEEEE
Q 014490 310 EVVMKQASVQ-RCNATVTFDDKSFYPVT--VNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA--IPGYFYY 384 (423)
Q Consensus 310 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~--ip~~~~~ 384 (423)
+++++.+... +.+++++. ...++|+ +.++++++.+.+++++.+|.++ .....+|++|++++.+. +|.++ .
T Consensus 312 ~~i~~~~~~~~~~~~~~~~--~~~~~p~~~~~~~~lv~~l~~a~~~~~g~~~--~~~~~~g~~D~~~~~~~g~~~~~v-~ 386 (427)
T PRK13013 312 ALLERLKRARPGFAYEIRD--LFEVLPTMTDRDAPVVRSVAAAIERVLGRQA--DYVVSPGTYDQKHIDRIGKLKNCI-A 386 (427)
T ss_pred HHHHHHHhhCCCceeEEEE--cccCCcccCCCCCHHHHHHHHHHHHhhCCCC--ceeecCccCCHHHHHhcCCCCCEE-E
Confidence 9998876533 45555544 3344554 3456899999999999878765 33466888999999887 33222 4
Q ss_pred eccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 385 LGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 385 ~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
+| ||....+|++|||+++++|.+++++|+.++.
T Consensus 387 fG-----Pg~~~~aH~~nE~v~i~~l~~~~~~l~~~l~ 419 (427)
T PRK13013 387 YG-----PGILDLAHQPDEWVGIADMVDSAKVMALVLA 419 (427)
T ss_pred EC-----CCCccccCCCCceeEHHHHHHHHHHHHHHHH
Confidence 56 5555679999999999999999999999875
No 8
>PRK06133 glutamate carboxypeptidase; Reviewed
Probab=100.00 E-value=3.9e-52 Score=414.02 Aligned_cols=362 Identities=18% Similarity=0.194 Sum_probs=295.3
Q ss_pred chHHHHhhcCchhHHHHHHHHHHhHhCCCCCCCc---HHHHHHHHHHHHhCCCCeEecc----cCceEEEEECCCCCcEE
Q 014490 36 PVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQE---FETSKLIRAELDQMGIPYKFPV----AVTGVVGYIGTGQPPFV 108 (423)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~E---~~~~~~l~~~l~~~g~~~~~~~----~~~nvia~~~~~~~~~i 108 (423)
.+++.++++++. +++++++++|++|||++++| .++++||.++|+++|++++... .++||+++++++++|+|
T Consensus 25 ~~~~~~~~~~~~--~~~~~~l~~lv~i~S~s~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~lia~~~g~~~~~i 102 (410)
T PRK06133 25 DAELLAAAQQEQ--PAYLDTLKELVSIESGSGDAEGLKQVAALLAERLKALGAKVERAPTPPSAGDMVVATFKGTGKRRI 102 (410)
T ss_pred HHHHHHHHHHhH--HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHhCCCeEEEEccCCCCCCeEEEEECCCCCceE
Confidence 456888888887 99999999999999999876 4799999999999999987632 35799999965545899
Q ss_pred EEEEecccccCcCCCCCccc--CCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHH
Q 014490 109 ALRADMDALAMEESVEWEHK--SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKM 182 (423)
Q Consensus 109 ll~~H~Dtvp~~~~~~w~~~--~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~ 182 (423)
+|+||+||||.+. .|..+ ..+||++||||+ |++++++|.|+++|++.+..++++|.|+|+++|| |+.|++.+
T Consensus 103 ll~~H~D~Vp~~~--~w~~~Pf~~~~~~iyGrG~~D~kgg~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~G~~~~ 180 (410)
T PRK06133 103 MLIAHMDTVYLPG--MLAKQPFRIDGDRAYGPGIADDKGGVAVILHALKILQQLGFKDYGTLTVLFNPDEETGSPGSREL 180 (410)
T ss_pred EEEeecCccCCCC--ccCCCCEEEECCEEECCccccchHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCcccCCccHHHH
Confidence 9999999999854 47533 367899999997 8999999999999998887788999999999999 77899999
Q ss_pred HhcCCCcccceeeeeccCCCCCCceEEeecCcccCcceEEEEEEEeCCCCCC-CCCCCCcHHHHHHHHHHHHHHhhcccC
Q 014490 183 LDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAA-IPQHTIDPIVAASNVIVSLQHLVSREA 261 (423)
Q Consensus 183 ~~~~~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~-~p~~g~nAi~~~~~~i~~l~~~~~~~~ 261 (423)
+++.. .+.|++++.++ +.+.+.+. ++++|..+++++++|+++||| .|+.|.|||..+++++..|+++..
T Consensus 181 ~~~~~-~~~d~~i~~ep--~~~~~~v~----~~~~G~~~~~v~v~G~~~Hsg~~p~~g~nAi~~~~~~i~~l~~~~~--- 250 (410)
T PRK06133 181 IAELA-AQHDVVFSCEP--GRAKDALT----LATSGIATALLEVKGKASHAGAAPELGRNALYELAHQLLQLRDLGD--- 250 (410)
T ss_pred HHHHh-ccCCEEEEeCC--CCCCCCEE----EeccceEEEEEEEEeeccccCCCcccCcCHHHHHHHHHHHHHhccC---
Confidence 87643 35688887643 33333333 235799999999999999986 799999999999999999988642
Q ss_pred CCCCCceEEEEEEecCCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCcccc---
Q 014490 262 DPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVN--- 338 (423)
Q Consensus 262 ~~~~~~t~~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 338 (423)
+....+++++.|+||...|+||++|++.+|+|+.|.++.+++.++|++++++ +...+.+++++. ...++++..
T Consensus 251 -~~~~~t~~~~~i~gG~~~nvIP~~~~~~~diR~~~~~~~~~v~~~i~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~ 326 (410)
T PRK06133 251 -PAKGTTLNWTVAKAGTNRNVIPASASAQADVRYLDPAEFDRLEADLQEKVKN-KLVPDTEVTLRF--ERGRPPLEANAA 326 (410)
T ss_pred -CCCCeEEEeeEEECCCCCceeCCccEEEEEEEECCHHHHHHHHHHHHHHHhc-cCCCCeEEEEEe--ccccCCcccCcc
Confidence 2234689999999999999999999999999999999999999999999987 333466666665 445666543
Q ss_pred CHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhh-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHH
Q 014490 339 NKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALH 417 (423)
Q Consensus 339 d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~ 417 (423)
++++++.+++++++. |.++...+...+|++|++++... +|++++++|+.+ .++|++|||++++++.+++++|
T Consensus 327 ~~~l~~~~~~~~~~~-~~~~~~~~~~~~g~tDa~~~~~~gip~v~~g~G~~~------~~aH~~nE~i~i~~~~~~~~~~ 399 (410)
T PRK06133 327 SRALAEHAQGIYGEL-GRRLEPIDMGTGGGTDAAFAAGSGKAAVLEGFGLVG------FGAHSNDEYIELNSIVPRLYLL 399 (410)
T ss_pred hHHHHHHHHHHHHHc-CCCccccccCCCCCchHHHHHhcCCCceEecccCCC------CCCCCCCcEEEcccHHHHHHHH
Confidence 346888888888775 65542112467899999999987 888887778532 3599999999999999999999
Q ss_pred HHHHh
Q 014490 418 ASLAT 422 (423)
Q Consensus 418 ~~~i~ 422 (423)
+.++.
T Consensus 400 ~~~~~ 404 (410)
T PRK06133 400 TRMIM 404 (410)
T ss_pred HHHHH
Confidence 99875
No 9
>PRK13983 diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-52 Score=417.73 Aligned_cols=359 Identities=18% Similarity=0.198 Sum_probs=293.8
Q ss_pred HHHHHHHHHhHhCCCCCC-----CcHHHHHHHHHHHHhCCCC-eEec---c----c--CceEEEEECCC-CCcEEEEEEe
Q 014490 50 YWMVNIRRKIHENPELGF-----QEFETSKLIRAELDQMGIP-YKFP---V----A--VTGVVGYIGTG-QPPFVALRAD 113 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~-----~E~~~~~~l~~~l~~~g~~-~~~~---~----~--~~nvia~~~~~-~~~~ill~~H 113 (423)
+++++++++|++|||+|+ +|.++++||.++|+++||+ ++.. + . ++|++++++++ ++++|+|+||
T Consensus 5 ~~~~~~l~~lv~i~s~s~~~~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~nl~~~~~g~~~~~~lll~~H 84 (400)
T PRK13983 5 DEMIELLSELIAIPAVNPDFGGEGEKEKAEYLESLLKEYGFDEVERYDAPDPRVIEGVRPNIVAKIPGGDGKRTLWIISH 84 (400)
T ss_pred HHHHHHHHHHhCcCCCCCCCCCccHHHHHHHHHHHHHHcCCceEEEEecCCcccccCCCccEEEEecCCCCCCeEEEEee
Confidence 789999999999999984 4889999999999999998 6542 1 1 68999999654 3479999999
Q ss_pred cccccCcCCCCCccc----CCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Cc-ccHHHHHh
Q 014490 114 MDALAMEESVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG-GGAKKMLD 184 (423)
Q Consensus 114 ~Dtvp~~~~~~w~~~----~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~-~Ga~~~~~ 184 (423)
+||||+++.+.|+++ .++||++||||+ |++++++|.|+++|++.+..++++|.|+|+++|| |+ .|++++++
T Consensus 85 ~Dtvp~~~~~~W~~~p~~~~~~~g~lyGrG~~D~K~g~~a~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~~g~~~~~~ 164 (400)
T PRK13983 85 MDVVPPGDLSLWETDPFKPVVKDGKIYGRGSEDNGQGIVSSLLALKALMDLGIRPKYNLGLAFVSDEETGSKYGIQYLLK 164 (400)
T ss_pred ccccCCCCcccccCCCCcceeeCCEEEecCccCccchHHHHHHHHHHHHHhCCCCCCcEEEEEEeccccCCcccHHHHHh
Confidence 999999888889654 456899999997 8999999999999999888899999999999999 66 48999987
Q ss_pred c--CCCcccceeeeeccCCCCCCceEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHH-hhccc-
Q 014490 185 A--GALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQH-LVSRE- 260 (423)
Q Consensus 185 ~--~~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~-~~~~~- 260 (423)
. +.+.+.|++++ ++.++|++... ..+++|..+++|+++|+++|+|.|+.|+||+..+++++..++. +....
T Consensus 165 ~~~~~~~~~d~~i~--~~~~~~~~~~i---~~~~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~ 239 (400)
T PRK13983 165 KHPELFKKDDLILV--PDAGNPDGSFI---EIAEKSILWLKFTVKGKQCHASTPENGINAHRAAADFALELDEALHEKFN 239 (400)
T ss_pred hcccccCCCCEEEE--ecCCCCCCcee---EEeecceEEEEEEEEeEccccCCCCCCCCHHHHHHHHHHHHHHHHHhhhc
Confidence 6 55556677765 34456766532 2346799999999999999999999999999999999999987 42111
Q ss_pred -CCC---CCCceEEEEEEecC-CCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeec-cCCCC
Q 014490 261 -ADP---LDSQVLTVAKFEGG-GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDD-KSFYP 334 (423)
Q Consensus 261 -~~~---~~~~t~~v~~i~gg-~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~ 334 (423)
.++ ....+++++.+.+| ...|+||++|++++|+|++|+++.++++++|++++++.+..++.+++++... ..+..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~g~~~~nvvp~~~~~~~diR~~p~~~~~~v~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~ 319 (400)
T PRK13983 240 AKDPLFDPPYSTFEPTKKEANVDNINTIPGRDVFYFDCRVLPDYDLDEVLKDIKEIADEFEEEYGVKIEVEIVQREQAPP 319 (400)
T ss_pred ccccccCCCCcccccceeecCCcCCcccCCeeEEEEEEEeCCCCCHHHHHHHHHHHHHHhccccCcceeEEEeeccCCcc
Confidence 111 12347788888877 5899999999999999999999999999999999998777666677766521 11233
Q ss_pred ccccCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhh-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHH
Q 014490 335 VTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYG 413 (423)
Q Consensus 335 ~~~~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~ 413 (423)
+.+.|+++++.+.+++++.+|.++. +...+|++|++++... +|++++ | ||+ ..+|++||+++++++.++
T Consensus 320 ~~~~~~~~v~~l~~a~~~~~g~~~~--~~~~~g~td~~~~~~~gip~v~~--G-----p~~-~~~H~~nE~v~i~~l~~~ 389 (400)
T PRK13983 320 PTPPDSEIVKKLKRAIKEVRGIEPK--VGGIGGGTVAAFLRKKGYPAVVW--S-----TLD-ETAHQPNEYAKISNLIED 389 (400)
T ss_pred CCCCCcHHHHHHHHHHHHhcCCCce--eeeecCcHHHHHHHHcCCCEEEe--C-----Ccc-ccCCCCCceeeHHHHHHH
Confidence 4567789999999999998888663 3467889999999876 998766 4 343 369999999999999999
Q ss_pred HHHHHHHHhC
Q 014490 414 AALHASLATS 423 (423)
Q Consensus 414 ~~~~~~~i~~ 423 (423)
+++|++++.+
T Consensus 390 ~~~~~~~~~~ 399 (400)
T PRK13983 390 AKVFALLLLE 399 (400)
T ss_pred HHHHHHHHhc
Confidence 9999999864
No 10
>PRK06837 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=4.5e-52 Score=415.87 Aligned_cols=365 Identities=16% Similarity=0.130 Sum_probs=296.8
Q ss_pred cchHHHHhhcCchhHHHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEec--------------------ccCc
Q 014490 35 IPVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP--------------------VAVT 94 (423)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~--------------------~~~~ 94 (423)
..+++.++++... +++++++++|++|||+|++|.++++||.++|+++|++++.. +.++
T Consensus 7 ~~~~~~~~i~~~~--~~~~~~l~~li~ipS~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (427)
T PRK06837 7 LTQRILAAVDAGF--DAQVAFTQDLVRFPSTRGAEAPCQDFLARAFRERGYEVDRWSIDPDDLKSHPGAGPVEIDYSGAP 84 (427)
T ss_pred HHHHHHHHHHhhh--HHHHHHHHHHhccCCCCCcHHHHHHHHHHHHHHCCCceEEecCCHHHhhhcccccccccccCCCc
Confidence 3456788888877 99999999999999999999999999999999999987541 2578
Q ss_pred eEEEEECCC--CCcEEEEEEecccccCcCCCCCccc----CCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceE
Q 014490 95 GVVGYIGTG--QPPFVALRADMDALAMEESVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTI 165 (423)
Q Consensus 95 nvia~~~~~--~~~~ill~~H~Dtvp~~~~~~w~~~----~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i 165 (423)
||++++++. .+|+|+|+|||||||+++...|+.+ .++||++||||+ ||+++++|.|+++|++.+..++++|
T Consensus 85 nl~a~~~g~~~~~~~il~~gH~DvVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~~a~l~a~~~l~~~~~~~~~~i 164 (427)
T PRK06837 85 NVVGTYRPAGKTGRSLILQGHIDVVPEGPLDLWSRPPFDPVIVDGWMYGRGAADMKAGLAAMLFALDALRAAGLAPAARV 164 (427)
T ss_pred eEEEEecCCCCCCCeEEEEeecccCCCCCccccccCCCCcEEECCEEEecCcccchHHHHHHHHHHHHHHHcCCCCCCcE
Confidence 999999653 3589999999999999987789654 457899999998 8999999999999999888889999
Q ss_pred EEEEecCCC-CcccHHHHHhcCCCcccceeeeeccCCCCCCceEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHH
Q 014490 166 VLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIV 244 (423)
Q Consensus 166 ~~~~~~~EE-g~~Ga~~~~~~~~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~ 244 (423)
.|+|+++|| ++.|+..++..++ ..|++++. +|++.. ...+++|..+++|+++|+++|+|.|+.|.||+.
T Consensus 165 ~~~~~~dEE~~g~g~~~~~~~~~--~~d~~iv~-----ep~~~~---i~~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~ 234 (427)
T PRK06837 165 HFQSVIEEESTGNGALSTLQRGY--RADACLIP-----EPTGEK---LVRAQVGVIWFRLRVRGAPVHVREAGTGANAID 234 (427)
T ss_pred EEEEEeccccCCHhHHHHHhcCc--CCCEEEEc-----CCCCCc---cccccceeEEEEEEEEeeccccCCcccCcCHHH
Confidence 999999999 7789988877765 45776653 344321 234567999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccc-----C-----CCCCCceEEEEEEecCCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHH
Q 014490 245 AASNVIVSLQHLVSRE-----A-----DPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMK 314 (423)
Q Consensus 245 ~~~~~i~~l~~~~~~~-----~-----~~~~~~t~~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~ 314 (423)
.+++++.+|+.+.... . +.....++|++.|+||...|+||++|++.+++|+.|+++++++.++|++++++
T Consensus 235 ~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~t~ni~~i~gG~~~nvVP~~~~~~~~ir~~p~~~~~~v~~~i~~~~~~ 314 (427)
T PRK06837 235 AAYHLIQALRELEAEWNARKASDPHFEDVPHPINFNVGIIKGGDWASSVPAWCDLDCRIAIYPGVTAADAQAEIEACLAA 314 (427)
T ss_pred HHHHHHHHHHHHHHHHhhcccCCCcccCCCCceeEeeeeEeCCCCCCccCCEEEEEEEEeECCCCCHHHHHHHHHHHHHH
Confidence 9999999998774211 0 01134589999999999999999999999999999999999999999999987
Q ss_pred HHHhc----CCeEEEEeeccCCCCcc--ccCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHh-h-cCeEEEEec
Q 014490 315 QASVQ----RCNATVTFDDKSFYPVT--VNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAE-A-IPGYFYYLG 386 (423)
Q Consensus 315 ~~~~~----~~~~~~~~~~~~~~~~~--~~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~-~-ip~~~~~~g 386 (423)
.+... +..+++++. ....+|+ +.++++++.+++++++.+|.++ .+...+|++|++++.+ . +|++. +|
T Consensus 315 ~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~a~~~~~g~~~--~~~~~~g~tDa~~~~~~~gip~v~--~G 389 (427)
T PRK06837 315 AARDDRFLSNNPPEVVWS-GFLAEGYVLEPGSEAEAALARAHAAVFGGPL--RSFVTTAYTDTRFYGLYYGIPALC--YG 389 (427)
T ss_pred HHhcChhhhhCCCeEEEE-ecccCCcCCCCCCHHHHHHHHHHHHHhCCCC--eeeEEeeccchHHHhccCCCCEEE--EC
Confidence 65432 222344331 1223333 4567999999999999888765 3456789999999985 3 89765 45
Q ss_pred cCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 387 MNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 387 ~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
||+ ..+|++||++++++|.+++++|+.++.
T Consensus 390 -----p~~-~~~H~~nE~i~i~~l~~~~~~~~~~l~ 419 (427)
T PRK06837 390 -----PSG-EGIHGFDERVDLESVRKVTKTIALFVA 419 (427)
T ss_pred -----CCC-CccCCCCceEEHHHHHHHHHHHHHHHH
Confidence 333 359999999999999999999999875
No 11
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase. This group of sequences contains annotations for both acetylornithine deacetylase and succinyl-diaminopimelate desuccinylase, but does not contain any members with experimental characterization. Bacillus, Staphylococcus and Sulfolobus species contain multiple hits to this subfamily and each may have a separate activity. Determining which is which must await further laboratory research.
Probab=100.00 E-value=5.8e-53 Score=416.10 Aligned_cols=347 Identities=19% Similarity=0.221 Sum_probs=282.4
Q ss_pred HHHHHhHhCCC---CCCCcHHHHHHHHHHHHhCCCCeEec---ccCc----eEEEEECCC-CCcEEEEEEecccccCcCC
Q 014490 54 NIRRKIHENPE---LGFQEFETSKLIRAELDQMGIPYKFP---VAVT----GVVGYIGTG-QPPFVALRADMDALAMEES 122 (423)
Q Consensus 54 ~~~~~l~~ips---~s~~E~~~~~~l~~~l~~~g~~~~~~---~~~~----nvia~~~~~-~~~~ill~~H~Dtvp~~~~ 122 (423)
+++++|++||| ++++|.++++||.++|+++|++++.. .... |+++.+.+. .+|+|+|++||||||.++.
T Consensus 2 ~~l~~lv~i~s~~~~~~~e~~~a~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ill~~H~DtVp~~~~ 81 (375)
T TIGR01910 2 ELLKDLISIPSVNPPGGNEETIANYIKDLLREFGFSTDVIEITDDRLKVLGKVVVKEPGNGNEKSLIFNGHYDVVPAGDL 81 (375)
T ss_pred hhHHhhhcCCCCCCCCcCHHHHHHHHHHHHHHCCCceEEEecCchhcccccceEEeccCCCCCCEEEEecccccccCCCh
Confidence 57889999999 78899999999999999999998652 1223 356665443 3599999999999999888
Q ss_pred CCCccc----CCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHhcCCCccccee
Q 014490 123 VEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAI 194 (423)
Q Consensus 123 ~~w~~~----~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~~~~~~~~~~d~~ 194 (423)
.+|+++ .+++|++||||+ |++++++|.|+++|++.+..++++|.|+|+++|| |+.|++.+++++.+++.|++
T Consensus 82 ~~w~~~Pf~~~~~~g~i~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~G~~~~~~~~~~~~~d~~ 161 (375)
T TIGR01910 82 ELWKTDPFKPVEKDGKLYGRGATDMKGGLVALLYALKAIREAGIKPNGNIILQSVVDEESGEAGTLYLLQRGYFKDADGV 161 (375)
T ss_pred hhCcCCCCCcEEECCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEEEEEEcCcccCchhHHHHHHcCCCCCCCEE
Confidence 889654 356899999997 8999999999999998887789999999999999 77899999998877667777
Q ss_pred eeeccCCCCCCceEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhcccC------CCCCCce
Q 014490 195 FGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREA------DPLDSQV 268 (423)
Q Consensus 195 i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~------~~~~~~t 268 (423)
++.+ ++. .+.+. .+++|..+++|+++|+++|+|.|+.|.|||..++++|.+|+++..... .....++
T Consensus 162 i~~~--~~~-~~~v~----~~~~G~~~~~i~~~G~~~Hs~~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~t 234 (375)
T TIGR01910 162 LIPE--PSG-GDNIV----IGHKGSIWFKLRVKGKQAHASFPQFGVNAIMKLAKLITELNELEEHIYARNSYGFIPGPIT 234 (375)
T ss_pred EECC--CCC-CCceE----EEecceEEEEEEEeeeecccCCCCcchhHHHHHHHHHHHHHHHHHHhhhcccccccCCCcc
Confidence 7643 211 12222 345799999999999999999999999999999999999998753211 1124579
Q ss_pred EEEEEEecCCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCC-CCccccCHHHHHHHH
Q 014490 269 LTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSF-YPVTVNNKNLHEHFQ 347 (423)
Q Consensus 269 ~~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~l~ 347 (423)
++++.|+||...|+||++|++.+|+|+.|.++++++.++|++++++.+..++++++++.....+ ....+.++++++.++
T Consensus 235 ~~i~~i~gG~~~nviP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (375)
T TIGR01910 235 FNPGVIKGGDWVNSVPDYCEFSIDVRIIPEENLDEVKQIIEDVVKALSKSDGWLYENEPVVKWSGPNETPPDSRLVKALE 314 (375)
T ss_pred ccceeEECCCCcCcCCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHHHhhcCcHHhhCCCeeeecCCcCCCCCCHHHHHHH
Confidence 9999999999999999999999999999999999999999999998776666666654321112 224466789999999
Q ss_pred HHHHHhcCCcccccCCCCCCCchHHHHHhh-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHH
Q 014490 348 KVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAAL 416 (423)
Q Consensus 348 ~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~ 416 (423)
+++++.+|.++. +...+|++|+++|.+. +|++.+ | ||+...+|++|||+++++|.+++++
T Consensus 315 ~~~~~~~g~~~~--~~~~~g~tD~~~~~~~gip~v~~--G-----pg~~~~~H~~~E~v~~~~~~~~~~~ 375 (375)
T TIGR01910 315 AIIKKVRGIEPE--VLVSTGGTDARFLRKAGIPSIVY--G-----PGDLETAHQVNEYISIKNLVESTKV 375 (375)
T ss_pred HHHHHHhCCCCe--EeeeccchhHHHHHHcCCcEEEE--C-----CCCccccCCCCceeEHHHHHHHhhC
Confidence 999998788663 3467899999999987 998764 5 3434579999999999999999874
No 12
>PRK07338 hypothetical protein; Provisional
Probab=100.00 E-value=2.4e-51 Score=408.33 Aligned_cols=359 Identities=19% Similarity=0.194 Sum_probs=290.6
Q ss_pred chHHHHhhcCchhHHHHHHHHHHhHhCCCCCCCc---HHHHHHHHHHHHhCCCCeEecc-----------------cCce
Q 014490 36 PVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQE---FETSKLIRAELDQMGIPYKFPV-----------------AVTG 95 (423)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~E---~~~~~~l~~~l~~~g~~~~~~~-----------------~~~n 95 (423)
..++.++++++. ++++++|++|++|||+++++ .++++||.++|+++|++++... .++|
T Consensus 5 ~~~~~~~~~~~~--~~~~~~l~~lv~i~S~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~n 82 (402)
T PRK07338 5 ERAVLDLIDDRQ--APMLEQLIAWAAINSGSRNLDGLARMAELLADAFAALPGEIELIPLPPVEVIDADGRTLEQAHGPA 82 (402)
T ss_pred HHHHHHHHhhhH--HHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHHHhCCCcEEEecCCccccccccccccccCcCCe
Confidence 345777888777 89999999999999999875 5789999999999999887521 1269
Q ss_pred EEEEECCCCCcEEEEEEecccccCcCCCCCcccC---CCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEE
Q 014490 96 VVGYIGTGQPPFVALRADMDALAMEESVEWEHKS---KVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVF 169 (423)
Q Consensus 96 via~~~~~~~~~ill~~H~Dtvp~~~~~~w~~~~---~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~ 169 (423)
|+|+++++.+++|+|+||+||||++. .||.. ++||++||||+ ||+++++|.|+++|++.+.+++++|.|+|
T Consensus 83 l~a~~~~~~~~~lll~gH~DvVp~~~---~Pf~~~~~~~~g~lyGrG~~DmKgg~aa~l~a~~~l~~~~~~~~~~i~~~~ 159 (402)
T PRK07338 83 LHVSVRPEAPRQVLLTGHMDTVFPAD---HPFQTLSWLDDGTLNGPGVADMKGGIVVMLAALLAFERSPLADKLGYDVLI 159 (402)
T ss_pred EEEEECCCCCccEEEEeecCccCCCC---CcccCCeEeeCCEEECCcHHhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE
Confidence 99999654446899999999999853 45542 67899999998 89999999999999988877889999999
Q ss_pred ecCCC-CcccHHHHHhcCCCcccceeeeeccCCCCCCceEEeecCcccCcceEEEEEEEeCCCCCCC-CCCCCcHHHHHH
Q 014490 170 QPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAI-PQHTIDPIVAAS 247 (423)
Q Consensus 170 ~~~EE-g~~Ga~~~~~~~~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~-p~~g~nAi~~~~ 247 (423)
+++|| |+.|++.++++.. ...+++++.+ |..+.+.+. .+++|..+++|+++|+++|+|. |+.|.|||..++
T Consensus 160 ~~dEE~g~~g~~~~~~~~~-~~~~~~i~~e--p~~~~~~v~----~~~kG~~~~~v~v~G~~aHs~~~p~~g~nAi~~~~ 232 (402)
T PRK07338 160 NPDEEIGSPASAPLLAELA-RGKHAALTYE--PALPDGTLA----GARKGSGNFTIVVTGRAAHAGRAFDEGRNAIVAAA 232 (402)
T ss_pred ECCcccCChhhHHHHHHHh-ccCcEEEEec--CCCCCCcEE----eecceeEEEEEEEEeEcccCCCCcccCccHHHHHH
Confidence 99999 7789999988754 2456666543 332334432 3356999999999999999995 899999999999
Q ss_pred HHHHHHHHhhcccCCCCCCceEEEEEEecCCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEe
Q 014490 248 NVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTF 327 (423)
Q Consensus 248 ~~i~~l~~~~~~~~~~~~~~t~~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~ 327 (423)
+++.+|+++... ....++|++.|+||...|+||++|++.+|+|+.|.++.+++.++|++++++.+..++++++++.
T Consensus 233 ~~i~~l~~l~~~----~~~~t~~vg~i~gG~~~nvVP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~ 308 (402)
T PRK07338 233 ELALALHALNGQ----RDGVTVNVAKIDGGGPLNVVPDNAVLRFNIRPPTPEDAAWAEAELKKLIAQVNQRHGVSLHLHG 308 (402)
T ss_pred HHHHHHHhhhcc----CCCcEEEEEEEecCCCCceeccccEEEEEeccCCHHHHHHHHHHHHHHHhccccCCCeEEEEEc
Confidence 999999887422 2346899999999999999999999999999999999999999999999987655566666543
Q ss_pred eccCCCCccc---cCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhh-cCeEEEEeccCCCCCCCCCCCCCCCc
Q 014490 328 DDKSFYPVTV---NNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYF 403 (423)
Q Consensus 328 ~~~~~~~~~~---~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pg~~~~~H~~~E 403 (423)
...++++. .++++++.++++.++. |.++ .....+|++|+++|... +|++. ++|+ |+ ..+|++||
T Consensus 309 --~~~~~p~~~~~~~~~l~~~~~~~~~~~-g~~~--~~~~~~g~tDa~~~~~~giP~v~-~~Gp-----g~-~~~H~~~E 376 (402)
T PRK07338 309 --GFGRPPKPIDAAQQRLFEAVQACGAAL-GLTI--DWKDSGGVCDGNNLAAAGLPVVD-TLGV-----RG-GNIHSEDE 376 (402)
T ss_pred --cccCCCCCCCcchHHHHHHHHHHHHHc-CCCc--ccccCCccchHHHHhhcCCCeEe-ccCC-----CC-CCCCCccc
Confidence 22344443 3457999999988775 8765 34568899999999877 89874 3553 32 35899999
Q ss_pred cCCCCchHHHHHHHHHHHh
Q 014490 404 RVNEDALPYGAALHASLAT 422 (423)
Q Consensus 404 ~i~~~~l~~~~~~~~~~i~ 422 (423)
|+++++|.+++++|+.++.
T Consensus 377 ~v~i~~l~~~~~~~~~~l~ 395 (402)
T PRK07338 377 FVILDSLVERAQLSALILM 395 (402)
T ss_pred eEehhhHHHHHHHHHHHHH
Confidence 9999999999999999875
No 13
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=1.3e-51 Score=406.60 Aligned_cols=352 Identities=18% Similarity=0.201 Sum_probs=283.6
Q ss_pred HHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEe--cccCceEEEEECCCCCcEEEEEEecccccCcCCCCCccc
Q 014490 51 WMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKF--PVAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWEHK 128 (423)
Q Consensus 51 ~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~--~~~~~nvia~~~~~~~~~ill~~H~Dtvp~~~~~~w~~~ 128 (423)
++++++++|++|||+|++|.++++||.++|+++||+++. ...++|+++++++ ++|+|+|++|+||||.++...|+++
T Consensus 3 ~~~~~l~~Lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~n~~~~~g~-~~~~i~l~~H~D~Vp~g~~~~w~~~ 81 (375)
T PRK13009 3 DVLELAQDLIRRPSVTPDDAGCQDLLAERLEALGFTCERMDFGDVKNLWARRGT-EGPHLCFAGHTDVVPPGDLEAWTSP 81 (375)
T ss_pred hHHHHHHHHhCCCCCCCchhhHHHHHHHHHHHcCCeEEEeccCCCcEEEEEecC-CCCEEEEEeecccCCCCCcccCCCC
Confidence 578899999999999999999999999999999999875 2457899999843 4699999999999999887889654
Q ss_pred ----CCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Cc-ccHHHHHhcCC--Ccccceeeee
Q 014490 129 ----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG-GGAKKMLDAGA--LENVEAIFGL 197 (423)
Q Consensus 129 ----~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~-~Ga~~~~~~~~--~~~~d~~i~~ 197 (423)
.++||++||||+ |++++++|.|+++|++.+..++++|+|+|+++|| ++ .|++.+++... ....|++++.
T Consensus 82 Pf~~~~~~g~iyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i~~~~~~~EE~~~~~G~~~~~~~~~~~~~~~d~~i~~ 161 (375)
T PRK13009 82 PFEPTIRDGMLYGRGAADMKGSLAAFVVAAERFVAAHPDHKGSIAFLITSDEEGPAINGTVKVLEWLKARGEKIDYCIVG 161 (375)
T ss_pred CCCcEEECCEEEecCCccChHHHHHHHHHHHHHHHhcCCCCceEEEEEEeecccccccCHHHHHHHHHHcCcCCCEEEEc
Confidence 356899999998 8999999999999998877788999999999999 33 59998875321 1246777654
Q ss_pred ccCCCCCCceEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhcccC-CCCCCceEEEEEEec
Q 014490 198 HVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREA-DPLDSQVLTVAKFEG 276 (423)
Q Consensus 198 ~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~-~~~~~~t~~v~~i~g 276 (423)
++....+.+. ....+++|..+++|+++|+++|++.|+.|.||+..+++++.+|+.+..+.. ......+++++.|++
T Consensus 162 ep~~~~~~~~---~i~~g~~g~~~~~i~v~G~~~Ha~~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~i~~i~~ 238 (375)
T PRK13009 162 EPTSTERLGD---VIKNGRRGSLTGKLTVKGVQGHVAYPHLADNPIHLAAPALAELAATEWDEGNEFFPPTSLQITNIDA 238 (375)
T ss_pred CCCcccCCCC---eEEEecceEEEEEEEEEecCcccCCCCcccCHHHHHHHHHHHHHhhhccCCCccCCCceEEEEEEec
Confidence 4322111111 112345799999999999999999999999999999999999987643222 223456899999998
Q ss_pred CC-CCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCcccc-CHHHHHHHHHHHHHhc
Q 014490 277 GG-AFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVN-NKNLHEHFQKVAADML 354 (423)
Q Consensus 277 g~-~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~l~~~~~~~~ 354 (423)
|. ..|+||++|++++|+|++|.++.+++.++|++.+++ .+.++++++ ...++|+.. ++++++.+++++++.+
T Consensus 239 G~~~~nvip~~~~~~~diR~~~~~~~e~i~~~i~~~~~~----~~~~~~~~~--~~~~~p~~~~~~~~~~~l~~a~~~~~ 312 (375)
T PRK13009 239 GTGATNVIPGELEAQFNFRFSTEHTAESLKARVEAILDK----HGLDYTLEW--TLSGEPFLTPPGKLVDAVVAAIEAVT 312 (375)
T ss_pred CCCCCcccCCcEEEEEEEecCCCCCHHHHHHHHHHHHHh----cCCCeEEEE--ecCCCcccCCCcHHHHHHHHHHHHHh
Confidence 86 789999999999999999999999999999998874 356666665 333444433 3789999999999988
Q ss_pred CCcccccCCCCCCCchHHHHHhh-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 355 GVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 355 g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
|.++ .....+|++|++++.+. +|++.+ | ||+ ..+|++||+++++++.+++++|+.++.
T Consensus 313 g~~~--~~~~~~g~tda~~~~~~g~p~v~~--G-----p~~-~~~H~~~E~i~~~~l~~~~~~~~~~~~ 371 (375)
T PRK13009 313 GITP--ELSTSGGTSDARFIADYGAQVVEF--G-----PVN-ATIHKVNECVSVADLEKLTRIYERILE 371 (375)
T ss_pred CCCc--eeeccCCCccHHHHHHcCCCeEEe--c-----cCc-ccCCCCCCcEEHHHHHHHHHHHHHHHH
Confidence 8876 33467888999999887 787654 5 333 359999999999999999999999875
No 14
>PRK13004 peptidase; Reviewed
Probab=100.00 E-value=1.3e-51 Score=409.37 Aligned_cols=363 Identities=18% Similarity=0.204 Sum_probs=291.8
Q ss_pred hHHHHhhcCchhHHHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEecccCceEEEEECCCCCcEEEEEEeccc
Q 014490 37 VKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDA 116 (423)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~~~~~~ill~~H~Dt 116 (423)
+.+.++++.++ +++++++++|++|||+|++|.++++||.++|+++||++...+.++|++++++++. |+|+|++|+||
T Consensus 4 ~~~~~~~~~~~--~~~~~~l~~lv~ips~s~~e~~~a~~l~~~l~~~G~~~~~~~~~~n~~a~~~~~~-~~i~~~~H~Dt 80 (399)
T PRK13004 4 KLILMLAEKYK--ADMTRFLRDLIRIPSESGDEKRVVKRIKEEMEKVGFDKVEIDPMGNVLGYIGHGK-KLIAFDAHIDT 80 (399)
T ss_pred HHHHHHHHHHH--HHHHHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCcEEEEcCCCeEEEEECCCC-cEEEEEeccCc
Confidence 35777888877 8999999999999999999999999999999999998655455679999996654 89999999999
Q ss_pred ccCcCCCCCccc----CCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-C-cccHHHHHhcCC
Q 014490 117 LAMEESVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-G-GGGAKKMLDAGA 187 (423)
Q Consensus 117 vp~~~~~~w~~~----~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g-~~Ga~~~~~~~~ 187 (423)
||.++..+|+++ .++||++||||+ |++++++|.|+++|++.+..++++|.|+|+++|| + +.|+++++++..
T Consensus 81 Vp~~~~~~w~~~P~~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~~EE~~~g~~~~~~~~~~~ 160 (399)
T PRK13004 81 VGIGDIKNWDFDPFEGEEDDGRIYGRGTSDQKGGMASMVYAAKIIKDLGLDDEYTLYVTGTVQEEDCDGLCWRYIIEEDK 160 (399)
T ss_pred cCCCChhhcccCCCccEEECCEEEeCCccccchHHHHHHHHHHHHHhcCCCCCCeEEEEEEcccccCcchhHHHHHHhcC
Confidence 999887789754 356899999998 7999999999999999887789999999999999 3 567888887654
Q ss_pred CcccceeeeeccCCCCCCceEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhcc--cCCCCC
Q 014490 188 LENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSR--EADPLD 265 (423)
Q Consensus 188 ~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~--~~~~~~ 265 (423)
+ ++|++++.+ |++. ...++++|..+++|+++|+++|++.|+.|.|||..+++++..|+.+... .....+
T Consensus 161 ~-~~d~~i~~e-----~~~~---~i~~~~~G~~~~~v~v~G~~~Ha~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~ 231 (399)
T PRK13004 161 I-KPDFVVITE-----PTDL---NIYRGQRGRMEIRVETKGVSCHGSAPERGDNAIYKMAPILNELEELNPNLKEDPFLG 231 (399)
T ss_pred C-CCCEEEEcc-----CCCC---ceEEecceEEEEEEEEeccccccCCCCCCCCHHHHHHHHHHHHHhhccccccCCcCC
Confidence 4 467777643 3221 1123457999999999999999999999999999999999999887533 222234
Q ss_pred CceEEEEEEecC-CCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeec-----------cCCC
Q 014490 266 SQVLTVAKFEGG-GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDD-----------KSFY 333 (423)
Q Consensus 266 ~~t~~v~~i~gg-~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~-----------~~~~ 333 (423)
..+++++.|.+| ...|+||++|++.+|+|+.|.++.+++.++++++.+. ...+.++++.... ...+
T Consensus 232 ~~~~~v~~i~~g~~~~nvvP~~~~~~~diR~~~~~~~~~v~~~i~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 309 (399)
T PRK13004 232 KGTLTVSDIFSTSPSRCAVPDSCAISIDRRLTVGETWESVLAEIRALPAV--KKANAKVSMYNYDRPSYTGLVYPTECYF 309 (399)
T ss_pred CceEEEeeeecCCCCCCccCCEEEEEEEEcCCCCCCHHHHHHHHHHHHhh--ccccceEEEecccCCCcccccccccccc
Confidence 568999999876 5899999999999999999999999999999888432 2234444432100 1234
Q ss_pred Ccc--ccCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHh-h-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCc
Q 014490 334 PVT--VNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAE-A-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDA 409 (423)
Q Consensus 334 ~~~--~~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~-~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~ 409 (423)
|++ +.++++++.+++++++++|.++. .....+++|++.+.. . +|++.+ | ||+...+|++||++++++
T Consensus 310 p~~~~~~~~~~~~~l~~a~~~~~g~~~~--~~~~~~~td~~~~~~~~Gip~v~~--G-----pg~~~~aH~~nE~i~i~~ 380 (399)
T PRK13004 310 PTWLYPEDHEFVKAAVEAYKGLFGKAPE--VDKWTFSTNGVSIAGRAGIPTIGF--G-----PGKEPLAHAPNEYTWKEQ 380 (399)
T ss_pred cccccCCCCHHHHHHHHHHHHHhCCCCe--ecccccccCCeEEehhcCCCEEEE--C-----CCcccccCCCCceeEHHH
Confidence 544 45789999999999999887652 345677888887753 4 897754 5 455567999999999999
Q ss_pred hHHHHHHHHHHHh
Q 014490 410 LPYGAALHASLAT 422 (423)
Q Consensus 410 l~~~~~~~~~~i~ 422 (423)
|.+++++|+.++.
T Consensus 381 l~~~~~~~~~~~~ 393 (399)
T PRK13004 381 LVKAAAMYAAIPK 393 (399)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999885
No 15
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase. SelD, selenophosphate synthase, is the selenium donor protein for both selenocysteine and selenouridine biosynthesis systems, but it occurs also in a few prokaryotes that have neither of those pathways. The method of partial phylogenetic profiling, starting from such orphan-selD genomes, identifies this protein as one of those most strongly correlated to SelD occurrence. Its distribution is also well correlated with that of family TIGR03309, a putative accessory protein of labile selenium (non-selenocysteine) enzyme maturation. This family includes the uncharacterized YgeY of Escherichia coli, and belongs to a larger family of metalloenzymes in which some are known peptidases, others enzymes of different types.
Probab=100.00 E-value=1.9e-51 Score=407.61 Aligned_cols=362 Identities=17% Similarity=0.191 Sum_probs=287.7
Q ss_pred HHHHhhcCchhHHHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEecccCceEEEEECCCCCcEEEEEEecccc
Q 014490 38 KFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDAL 117 (423)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~~~~~~ill~~H~Dtv 117 (423)
++.+++++++ +++++++++|++|||++++|.++++||.++|+++|+++...+...|+++.++++ .|+|+|++|+|||
T Consensus 3 ~~~~~~~~~~--~~~~~~l~~Lv~ips~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~v~~~~g~~-~~~l~l~~H~DtV 79 (395)
T TIGR03526 3 QIKSEAEKYR--GDMIRFLRDLVAIPSESGDEGRVALRIKQEMEKLGFDKVEIDPMGNVLGYIGHG-PKLIAMDAHIDTV 79 (395)
T ss_pred hHHHHHHHHH--HHHHHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCceEEEcCCCcEEEEeCCC-CCEEEEEeecccc
Confidence 5667777776 899999999999999999999999999999999999854334457999998543 4899999999999
Q ss_pred cCcCCCCCccc----CCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC--CcccHHHHHhcCCC
Q 014490 118 AMEESVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE--GGGGAKKMLDAGAL 188 (423)
Q Consensus 118 p~~~~~~w~~~----~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE--g~~Ga~~~~~~~~~ 188 (423)
|+++...|.++ .++||++||||+ ||+++++|.|++.|++.+..++.++.|+++++|| ++.|++.+++++.+
T Consensus 80 p~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~g~~~~~~~~~~~~ 159 (395)
T TIGR03526 80 GIGDMDQWQFDPYEGYEDEEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTLLVTGTVQEEDCDGLCWQYIIEEDKI 159 (395)
T ss_pred CCCCcccccCCCCceEEECCEEEecCccccchhHHHHHHHHHHHHHcCCCCCceEEEEEecccccCCcHhHHHHHhccCC
Confidence 99988899765 257899999996 9999999999999998887678899999999999 34567777776554
Q ss_pred cccceeeeeccCCCCCCceEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhccc-CCC-CCC
Q 014490 189 ENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSRE-ADP-LDS 266 (423)
Q Consensus 189 ~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~-~~~-~~~ 266 (423)
..|++++. +|++.. ...+++|..+++|+++|+++|++.|+.|+|||..+++++.+|+.+.... .++ .+.
T Consensus 160 -~~d~~i~~-----ep~~~~---i~~g~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~ 230 (395)
T TIGR03526 160 -KPEFVVIT-----EPTDMN---IYRGQRGRMEIKVTVKGVSCHGSAPERGDNAIYKMAPILKELSQLNANLVEDPFLGK 230 (395)
T ss_pred -CCCEEEec-----CCCCce---EEEEcceEEEEEEEEecCCCccCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCcccCc
Confidence 35777753 344321 1234679999999999999999999999999999999999998875322 122 245
Q ss_pred ceEEEEEEecCC-CCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeec-----------cCCCC
Q 014490 267 QVLTVAKFEGGG-AFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDD-----------KSFYP 334 (423)
Q Consensus 267 ~t~~v~~i~gg~-~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~-----------~~~~~ 334 (423)
.+++++.|++|. ..|+||++|++++|+|++|+++.+++.+.|+++++.. ..+.++++.... ...+|
T Consensus 231 ~~~~v~~i~~g~~~~nviP~~~~~~~d~R~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p 308 (395)
T TIGR03526 231 GTLTVSEIFFSSPSRCAVADGCTISIDRRLTWGETWEYALEQIRNLPAVQ--GAEAEVEMYEYDRPSYTGLVYPTECYFP 308 (395)
T ss_pred cceeeeeeecCCCCCCccCCeEEEEEEEecCCCCCHHHHHHHHHHHHHhc--CCcceEEEeccccccccccccccccccC
Confidence 799999999875 7999999999999999999999999999999987642 112333322110 01234
Q ss_pred cc--ccCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHH-HHHhh-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCch
Q 014490 335 VT--VNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFS-FFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDAL 410 (423)
Q Consensus 335 ~~--~~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~-~~~~~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l 410 (423)
++ +.++++++.+.+++++.+|..+. ....++++|++ ++.+. +|++. +| ||+...+|++|||++++++
T Consensus 309 ~~~~~~~~~~~~~l~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~g~p~v~--~G-----pg~~~~aH~~dE~i~i~~l 379 (395)
T TIGR03526 309 TWVLPEDHLITKAALETYKRLFGKEPG--VDKWTFSTNGVSIMGRHGIPVIG--FG-----PGDEDQAHAPNEKTWKEDL 379 (395)
T ss_pred ccccCCCCHHHHHHHHHHHHHhCCCCc--eeeeeeecccceehhhcCCCEEE--EC-----CcchhhccCCCceEEHHHH
Confidence 43 56789999999999999887653 23567777874 44555 88775 45 5555679999999999999
Q ss_pred HHHHHHHHHHHh
Q 014490 411 PYGAALHASLAT 422 (423)
Q Consensus 411 ~~~~~~~~~~i~ 422 (423)
.+++++|+++++
T Consensus 380 ~~~~~~~~~~~~ 391 (395)
T TIGR03526 380 VKAAAMYAAIPT 391 (395)
T ss_pred HHHHHHHHHHHH
Confidence 999999999986
No 16
>TIGR03320 ygeY M20/DapE family protein YgeY. Members of this protein family, including the YgeY protein of Escherichia coli, typically are found in extended genomic regions associated with purine catabolism. Homologs include peptidases and deacylases of the M20/M25 /M40 and DapE/ArgE families. The function is unknown.
Probab=100.00 E-value=1.5e-51 Score=408.47 Aligned_cols=362 Identities=18% Similarity=0.198 Sum_probs=285.9
Q ss_pred HHHHhhcCchhHHHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEecccCceEEEEECCCCCcEEEEEEecccc
Q 014490 38 KFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDAL 117 (423)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~~~~~~ill~~H~Dtv 117 (423)
++.+++++++ +++++++++|++|||++++|.++++||.++|+++|+++...+...|+++.++. ++|+|+|+||+|||
T Consensus 3 ~~~~~i~~~~--~~~~~~~~~lv~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~n~~~~~g~-~~~~l~l~~H~DtV 79 (395)
T TIGR03320 3 QIKSEAKKYR--GDMIRFLRDLVAIPSESGDEKRVAERIKEEMEKLGFDKVEIDPMGNVLGYIGH-GPKLIAMDAHIDTV 79 (395)
T ss_pred hHHHHHHHHH--HHHHHHHHHHHcCCCCCCchHHHHHHHHHHHHHhCCcEEEECCCCCEEEEeCC-CCcEEEEEeccccc
Confidence 5667777766 89999999999999999999999999999999999985433446799999853 34899999999999
Q ss_pred cCcCCCCCccc----CCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCC--cccHHHHHhcCCC
Q 014490 118 AMEESVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEG--GGGAKKMLDAGAL 188 (423)
Q Consensus 118 p~~~~~~w~~~----~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg--~~Ga~~~~~~~~~ 188 (423)
|+++..+|.++ .++||++||||+ |++++++|.|+++|++.+..++.+|.|+++++||. +.+.+.+++...+
T Consensus 80 p~~~~~~w~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~A~~~l~~~g~~~~~~i~~~~~~dEE~~~g~~~~~~~~~~~~ 159 (395)
T TIGR03320 80 GIGDSKQWQFDPYEGYEDEEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTLLVTGTVQEEDCDGLCWQYIIEEDGI 159 (395)
T ss_pred CCCCccccccCCCceEEECCEEEecCccCccchHHHHHHHHHHHHHcCCCCCceEEEEecccccccCchHHHHHHHhcCC
Confidence 99888889664 357899999997 99999999999999988877788999999999993 3345666655433
Q ss_pred cccceeeeeccCCCCCCceEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhccc-CCC-CCC
Q 014490 189 ENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSRE-ADP-LDS 266 (423)
Q Consensus 189 ~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~-~~~-~~~ 266 (423)
..|++++. +|++.. ...+++|..+++|+++|+++|+|.|+.|.|||..+++++..|+.+.... .++ .+.
T Consensus 160 -~~d~~iv~-----ep~~~~---i~~g~~G~~~~~v~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~ 230 (395)
T TIGR03320 160 -KPEFVVIT-----EPTDMN---IYRGQRGRMEIKVTVKGVSCHGSAPERGDNAIYKMAPILKELSQLNANLVEDPFLGK 230 (395)
T ss_pred -CCCEEEEc-----CCCccc---eEEecceEEEEEEEEeeeccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCc
Confidence 46777763 343321 2234679999999999999999999999999999999999998875322 122 345
Q ss_pred ceEEEEEEecCC-CCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeecc-----------CCCC
Q 014490 267 QVLTVAKFEGGG-AFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDK-----------SFYP 334 (423)
Q Consensus 267 ~t~~v~~i~gg~-~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~-----------~~~~ 334 (423)
.+++++.|++|. ..|+||++|++.+|+|+.|+++.+++.++|++++... ..++++++..... ..+|
T Consensus 231 ~t~~v~~i~~g~~~~NviP~~~~~~~diR~~p~~~~~~i~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (395)
T TIGR03320 231 GTLTVSEIFFSSPSRCAVADGCTISIDRRLTWGETWEYALEQIRNLPAVQ--GAEAKVEMYNYDRPSYTGLVYPTECYFP 308 (395)
T ss_pred CceeeeeeecCCCCcCccCCEEEEEEEEecCCCCCHHHHHHHHHHHHhhc--CCCceEeeeccCcccccccccccccccC
Confidence 699999999875 7999999999999999999999999999999886532 1123333221100 1244
Q ss_pred cc--ccCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHH-HHHhh-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCch
Q 014490 335 VT--VNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFS-FFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDAL 410 (423)
Q Consensus 335 ~~--~~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~-~~~~~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l 410 (423)
++ +.++++++.+.+++++.+|.++. ....++++|+. ++.+. +|++. +| ||+..++|++||||++++|
T Consensus 309 ~~~~~~~~~~v~~l~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~g~p~v~--~G-----pg~~~~aH~~nE~v~i~~l 379 (395)
T TIGR03320 309 TWVLPEDHLITKAALETYKRLFGKEPG--VDKWTFSTNGVSIMGRHGIPVIG--FG-----PGDEDQAHAPNEKTWKEDL 379 (395)
T ss_pred ccccCCCCHHHHHHHHHHHHHhCCCCc--eeecceecccceehhhcCCCEEE--EC-----CCchhhccCCCcEEEHHHH
Confidence 43 45689999999999999888653 23567778874 45555 88775 45 5666789999999999999
Q ss_pred HHHHHHHHHHHh
Q 014490 411 PYGAALHASLAT 422 (423)
Q Consensus 411 ~~~~~~~~~~i~ 422 (423)
.+++++|++++.
T Consensus 380 ~~~~~~~~~~~~ 391 (395)
T TIGR03320 380 VRAAAMYAAIPT 391 (395)
T ss_pred HHHHHHHHHHHH
Confidence 999999999985
No 17
>PRK08596 acetylornithine deacetylase; Validated
Probab=100.00 E-value=3.8e-51 Score=408.48 Aligned_cols=363 Identities=18% Similarity=0.158 Sum_probs=290.8
Q ss_pred HHHHhhcCchhHHHHHHHHHHhHhCCCCCC---CcHHHHHHHHHHHHhCCCCeEec---ccCceEEEEECCC-C--CcEE
Q 014490 38 KFLDFAKKPEIFYWMVNIRRKIHENPELGF---QEFETSKLIRAELDQMGIPYKFP---VAVTGVVGYIGTG-Q--PPFV 108 (423)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~l~~ips~s~---~E~~~~~~l~~~l~~~g~~~~~~---~~~~nvia~~~~~-~--~~~i 108 (423)
++.++++... +++++++++|++|||+++ +|.++++||+++|+++|++++.. +.++|++++++++ + +|+|
T Consensus 3 ~~~~~i~~~~--~~~~~~l~~Lv~i~S~s~~~~~e~~~a~~l~~~l~~~G~~~~~~~~~~~~~nvia~~~g~~~~~~~~l 80 (421)
T PRK08596 3 QLLEQIELRK--DELLELLKTLVRFETPAPPARNTNEAQEFIAEFLRKLGFSVDKWDVYPNDPNVVGVKKGTESDAYKSL 80 (421)
T ss_pred HHHHHHHhhH--HHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHCCCeEEEEEccCCCceEEEEecCCCCCCCcEE
Confidence 4566777766 889999999999999994 67889999999999999998762 4578999999543 2 3689
Q ss_pred EEEEecccccCcCCCCCccc----CCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHH
Q 014490 109 ALRADMDALAMEESVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAK 180 (423)
Q Consensus 109 ll~~H~Dtvp~~~~~~w~~~----~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~ 180 (423)
+|+||+||||+++...|+++ .++||++||||+ |++++++|.|+++|++.+..++++|.|+|+++|| |+.|++
T Consensus 81 ll~~H~DtVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~G~~ 160 (421)
T PRK08596 81 IINGHMDVAEVSADEAWETNPFEPTIKDGWLYGRGAADMKGGLAGALFAIQLLHEAGIELPGDLIFQSVIGEEVGEAGTL 160 (421)
T ss_pred EEeccccccCCCCccccccCCCCcEEECCEEEeccccccchHHHHHHHHHHHHHHcCCCCCCcEEEEEEeccccCCcCHH
Confidence 99999999999988889654 467899999998 8999999999999999888889999999999999 778999
Q ss_pred HHHhcCCCcccceeeeeccCCCCCCceEEeecCcccCcceEEEEEEEeC----------CCCCCCCCCCCcHHHHHHHHH
Q 014490 181 KMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGK----------GGHAAIPQHTIDPIVAASNVI 250 (423)
Q Consensus 181 ~~~~~~~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~----------~~Hs~~p~~g~nAi~~~~~~i 250 (423)
++++++. ..|++++.+ |++.. ..+++|..++.++++|. .+|++.|+.|.|||..++++|
T Consensus 161 ~~~~~~~--~~d~~i~~e-----p~~~~----~~~~~G~~~~~~~v~g~~~~~~~~~~~~~H~~~p~~G~nai~~~~~~i 229 (421)
T PRK08596 161 QCCERGY--DADFAVVVD-----TSDLH----MQGQGGVITGWITVKSPQTFHDGTRRQMIHAGGGLFGASAIEKMMKII 229 (421)
T ss_pred HHHhcCC--CCCEEEECC-----CCCCc----cccccceeeEEEEEEeecccccccccccccccCCccCcCHHHHHHHHH
Confidence 9998864 357777643 33321 13456877777888875 379999999999999999999
Q ss_pred HHHHHhhcc-----cCC--CCCCceEEEEEEecCCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhc----
Q 014490 251 VSLQHLVSR-----EAD--PLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQ---- 319 (423)
Q Consensus 251 ~~l~~~~~~-----~~~--~~~~~t~~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~---- 319 (423)
.+|+.+... ... ..+..++|++.|+||...|+||++|++.+|+|+.|+++++++.++|++++++.+...
T Consensus 230 ~~l~~~~~~~~~~~~~~~~~~~~~t~~v~~i~gG~~~nvvP~~~~~~~d~R~~p~~~~~~v~~~i~~~~~~~~~~~~~~~ 309 (421)
T PRK08596 230 QSLQELERHWAVMKSYPGFPPGTNTINPAVIEGGRHAAFIADECRLWITVHFYPNETYEQVIKEIEEYIGKVAAADPWLR 309 (421)
T ss_pred HHHHHHHHHHhhcccCccCCCCCcceeeeeeeCCCCCCccCceEEEEEEeeeCCCCCHHHHHHHHHHHHHHHHhcChhhh
Confidence 999886421 111 124578999999999999999999999999999999999999999999998754311
Q ss_pred --CCeEEEE---eec--cCCCCcc--ccCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhh-cCeEEEEeccCC
Q 014490 320 --RCNATVT---FDD--KSFYPVT--VNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMND 389 (423)
Q Consensus 320 --~~~~~~~---~~~--~~~~~~~--~~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~ 389 (423)
...+++. ... ....|++ +.++++++.+.+++++.+|.++ .....+|++|++++... +|++++ |
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~a~~~~~g~~~--~~~~~~g~tD~~~~~~~gip~v~~--G--- 382 (421)
T PRK08596 310 ENPPQFKWGGESMIEDRGEIFPSLEIDSEHPAVKTLSSAHESVLSKNA--ILDMSTTVTDGGWFAEFGIPAVIY--G--- 382 (421)
T ss_pred hCCceeEEecccccccccccCCCccCCCCchHHHHHHHHHHHHhCCCC--eeeEEeeecchhhhhhcCCCEEEE--C---
Confidence 1122211 000 1234544 5568999999999999988765 33456788999999887 998765 4
Q ss_pred CCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 390 ETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 390 ~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
||+...+|++||++++++|.+++++|+.++.
T Consensus 383 --pg~~~~~H~~~E~v~i~~~~~~~~~~~~~l~ 413 (421)
T PRK08596 383 --PGTLEEAHSVNEKVEIEQLIEYTKVITAFIY 413 (421)
T ss_pred --CCcccccCCCCceEEHHHHHHHHHHHHHHHH
Confidence 4445679999999999999999999999875
No 18
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade. This model describes a proteobacterial subset of succinyl-diaminopimelate desuccinylases. An experimentally confirmed Gram-positive lineage succinyl-diaminopimelate desuccinylase has been described for Corynebacterium glutamicum, and a neighbor-joining tree shows the seed members, SP:Q59284, and putative archaeal members such as TrEMBL:O58003 in a single clade. However, the archaeal members differ substantially, share a number of motifs with acetylornithine deacetylases rather than succinyl-diaminopimelate desuccinylases, and are not taken as trusted examples of succinyl-diaminopimelate desuccinylases. This model is limited to proteobacterial members for this reason.
Probab=100.00 E-value=3.2e-51 Score=403.06 Aligned_cols=351 Identities=20% Similarity=0.226 Sum_probs=280.3
Q ss_pred HHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEec--ccCceEEEEECCCCCcEEEEEEecccccCcCCCCCccc--
Q 014490 53 VNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP--VAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWEHK-- 128 (423)
Q Consensus 53 ~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~--~~~~nvia~~~~~~~~~ill~~H~Dtvp~~~~~~w~~~-- 128 (423)
++++++|++|||+|++|.++++||.++|+++||+++.. ..++|+++++++ .+|+|+|++|+||||+++.++|.++
T Consensus 2 ~~~l~~lv~ips~s~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~~~~~~g~-~~~~i~~~~H~DtVp~~~~~~W~~~p~ 80 (370)
T TIGR01246 2 TELAKELISRPSVTPNDAGCQDIIAERLEKLGFEIEWMHFGDTKNLWATRGT-GEPVLAFAGHTDVVPAGPEEQWSSPPF 80 (370)
T ss_pred hHHHHHHhcCCCCCcchHHHHHHHHHHHHHCCCEEEEEecCCCceEEEEecC-CCcEEEEEccccccCCCCccccccCCC
Confidence 57899999999999999999999999999999997652 346799998754 4599999999999999887889543
Q ss_pred --CCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Cc-ccHHHHHhcCC--Ccccceeeeecc
Q 014490 129 --SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG-GGAKKMLDAGA--LENVEAIFGLHV 199 (423)
Q Consensus 129 --~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~-~Ga~~~~~~~~--~~~~d~~i~~~~ 199 (423)
..+||++||||+ |++++++|.|++.+++.+..++++|+|+|+++|| ++ .|++.+++... ...+|++++.++
T Consensus 81 ~~~~~dg~~yGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~~~G~~~~~~~~~~~~~~~d~~i~~ep 160 (370)
T TIGR01246 81 EPVERDGKLYGRGAADMKGSLAAFIVAAERFVKKNPDHKGSISLLITSDEEGTAIDGTKKVVETLMARDELIDYCIVGEP 160 (370)
T ss_pred CcEEECCEEEecccccchHHHHHHHHHHHHHHHhcCCCCCcEEEEEEeccccCCCcCHHHHHHHHHhcCCCCCEEEEcCC
Confidence 356899999997 7999999999999988777788999999999999 44 69998875311 114677776543
Q ss_pred CCCCCCceEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhccc-CCCCCCceEEEEEEecCC
Q 014490 200 SSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSRE-ADPLDSQVLTVAKFEGGG 278 (423)
Q Consensus 200 ~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~-~~~~~~~t~~v~~i~gg~ 278 (423)
....+.+.. ...+++|..+++++++|+++|++.|+.|.||+..+++++..|+.+.... .+...+.+++++.|+||.
T Consensus 161 ~~~~~~~~~---i~~~~~G~~~~~v~v~G~~~H~~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~t~~i~~i~~g~ 237 (370)
T TIGR01246 161 SSVKKLGDV---IKNGRRGSITGNLTIKGIQGHVAYPHLANNPIHKAAPALAELTAIKWDEGNEFFPPTSLQITNIHAGT 237 (370)
T ss_pred CCcccCCce---EEEeeeEEEEEEEEEEccCcccCCcccCCCHHHHHHHHHHHHhhhhhccCCccCCCCceEeeeeecCC
Confidence 322222221 1234579999999999999999999999999999999999998764221 112345799999999996
Q ss_pred -CCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCc-cccCHHHHHHHHHHHHHhcCC
Q 014490 279 -AFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPV-TVNNKNLHEHFQKVAADMLGV 356 (423)
Q Consensus 279 -~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~~~~~l~~~~~~~~g~ 356 (423)
..|+||++|++.+|+|++|.++.+++.+.|++++++ ++.+++++. ...++| ..+++++++.+++++++.+|.
T Consensus 238 ~~~nvvP~~~~~~~diR~~~~~~~~~v~~~i~~~~~~----~~~~~~v~~--~~~~~p~~~~~~~~~~~~~~a~~~~~g~ 311 (370)
T TIGR01246 238 GANNVIPGELYVQFNLRFSTEVSDEILKQRVEAILDQ----HGLDYDLEW--SLSGEPFLTNDGKLIDKAREAIEETNGI 311 (370)
T ss_pred CCCcccCCceEEEEEEecCCCCCHHHHHHHHHHHHHH----cCCCEEEEE--ecCCcceeCCCCHHHHHHHHHHHHHhCC
Confidence 689999999999999999999999999999888764 356666665 222333 234788999999999998887
Q ss_pred cccccCCCCCCCchHHHHHhh-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHhC
Q 014490 357 QNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATS 423 (423)
Q Consensus 357 ~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~~ 423 (423)
++ .....+|++|++++... +|++.+ | ||+ ..+|++||++++++|.+++++|+.++.+
T Consensus 312 ~~--~~~~~~g~~d~~~~~~~g~p~~~~--G-----p~~-~~~H~~~E~i~i~~l~~~~~~~~~~l~~ 369 (370)
T TIGR01246 312 KP--ELSTGGGTSDGRFIALMGAEVVEF--G-----PVN-ATIHKVNECVSIEDLEKLSDVYQDLLEN 369 (370)
T ss_pred CC--ceecCCCCchHHHHHHcCCCEEEe--c-----CCc-ccCCCCCceeEHHHHHHHHHHHHHHHHh
Confidence 65 33567889999999887 887654 5 332 3489999999999999999999999863
No 19
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE). This model represents a clade of acetylornithine deacetylases from proteobacteria. This enzyme is the final step of the "acetylated" ornithine biosynthesis pathway. The enzyme is closely related to dapE, succinyl-diaminopimelate desuccinylase, and outside of this clade annotation is very inaccurate as to which function should be ascribed to genes.
Probab=100.00 E-value=5.8e-51 Score=400.56 Aligned_cols=338 Identities=21% Similarity=0.275 Sum_probs=273.7
Q ss_pred HHHHhHhCCCCCCCc-HHHHHHHHHHHHhCCCCeEecc-----cCceEEEEECCCCCcEEEEEEecccccCcCCCCCcc-
Q 014490 55 IRRKIHENPELGFQE-FETSKLIRAELDQMGIPYKFPV-----AVTGVVGYIGTGQPPFVALRADMDALAMEESVEWEH- 127 (423)
Q Consensus 55 ~~~~l~~ips~s~~E-~~~~~~l~~~l~~~g~~~~~~~-----~~~nvia~~~~~~~~~ill~~H~Dtvp~~~~~~w~~- 127 (423)
++++|++|||++++| .++++||.++|+++|++++... .++|++++++++++|+|+|+||+||||.++ ..|++
T Consensus 2 ~l~~lv~i~S~s~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~nl~~~~~~~~~~~i~l~~H~Dtvp~~~-~~w~~~ 80 (364)
T TIGR01892 2 ILTKLVAFDSTSFRPNVDLIDWAQAYLEALGFSVEVQPFPDGAEKSNLVAVIGPSGAGGLALSGHTDVVPYDD-AAWTRD 80 (364)
T ss_pred hHHHhhCcCCcCCccHHHHHHHHHHHHHHcCCeEEEEeCCCCCccccEEEEecCCCCCeEEEEcccccccCCC-CcCCCC
Confidence 688999999999866 7999999999999999877532 468999999654458999999999999976 57864
Q ss_pred --c-CCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHhcCCCcccceeeeeccC
Q 014490 128 --K-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVS 200 (423)
Q Consensus 128 --~-~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~~~~~~~~~~d~~i~~~~~ 200 (423)
. .++||++||||+ |++++++|.|+++|++.+ ++++|.|+|+++|| |+.|++++++++.+ ..|++++
T Consensus 81 Pf~~~~~~~~i~GrG~~D~Kg~~a~~l~a~~~l~~~~--~~~~v~~~~~~~EE~g~~G~~~~~~~~~~-~~d~~i~---- 153 (364)
T TIGR01892 81 PFRLTEKDGRLYGRGTCDMKGFLACALAAAPDLAAEQ--LKKPLHLALTADEEVGCTGAPKMIEAGAG-RPRHAII---- 153 (364)
T ss_pred CCcceeeCCEEEecCccccchHHHHHHHHHHHHHhcC--cCCCEEEEEEeccccCCcCHHHHHHhcCC-CCCEEEE----
Confidence 3 467899999995 999999999999998754 68899999999999 77899999988763 4566664
Q ss_pred CCCCCceEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhcccC-----CC--CCCceEEEEE
Q 014490 201 SLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREA-----DP--LDSQVLTVAK 273 (423)
Q Consensus 201 ~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~-----~~--~~~~t~~v~~ 273 (423)
++|++.... .+++|..+++|+++|+++|++.|+.|.|||..+++++.+|+++..... .+ ...++++++.
T Consensus 154 -~ep~~~~~~---~~~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 229 (364)
T TIGR01892 154 -GEPTRLIPV---RAHKGYASAEVTVRGRSGHSSYPDSGVNAIFRAGRFLQRLVHLADTLLREDLDEGFTPPYTTLNIGV 229 (364)
T ss_pred -CCCCCceeE---EeeceEEEEEEEEEcccccccCCccCcCHHHHHHHHHHHHHHHHHHhccCCCCccCCCCCceEEEee
Confidence 456665432 245799999999999999999999999999999999999987642211 11 1247999999
Q ss_pred EecCCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHH-hcCCeEEEEeeccCCCCcc--ccCHHHHHHHHHHH
Q 014490 274 FEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQAS-VQRCNATVTFDDKSFYPVT--VNNKNLHEHFQKVA 350 (423)
Q Consensus 274 i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~d~~~~~~l~~~~ 350 (423)
|+||...|+||++|++.+|+|++|+++.+++.++|++++++.+. .++++++++. ...++++ +.|+++++.+++++
T Consensus 230 i~gg~~~nviP~~~~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~~~~~~~v~~~~~~~ 307 (364)
T TIGR01892 230 IQGGKAVNIIPGACEFVFEWRPIPGMDPEELLQLLETIAQALVRDEPGFEVQIEV--VSTDPGVNTEPDAELVAFLEELS 307 (364)
T ss_pred eecCCCCcccCCeEEEEEEeecCCCCCHHHHHHHHHHHHHHHHhhCCCceEEEEE--ccCCCCcCCCCCCHHHHHHHHHh
Confidence 99999999999999999999999999999999999999987653 3466676655 3344443 45678888776543
Q ss_pred HHhcCCcccccCCCCCCCchHHHHHhh-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHH
Q 014490 351 ADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLA 421 (423)
Q Consensus 351 ~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i 421 (423)
|.++ ...++++|+++|... +|++.+ | ||+...+|++|||+++++|.+++++|+.++
T Consensus 308 ----~~~~----~~~~~~tD~~~~~~~gip~v~~--G-----pg~~~~~H~~~E~i~i~~l~~~~~~~~~~~ 364 (364)
T TIGR01892 308 ----GNAP----EVVSYGTEAPQFQELGAEAVVC--G-----PGDIRQAHQPDEYVEIEDLVRCRAVLARLV 364 (364)
T ss_pred ----CCCC----ceecccccHHHHHhCCCcEEEE--C-----CCChHhCCCCCceeeHHHHHHHHHHHHHhC
Confidence 5533 235668999999887 997665 4 444457999999999999999999998863
No 20
>PRK05111 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=1e-50 Score=401.43 Aligned_cols=344 Identities=18% Similarity=0.240 Sum_probs=277.6
Q ss_pred HHHHHHHHHhHhCCCCCCCc-------HHHHHHHHHHHHhCCCCeEec-----ccCceEEEEECCCCCcEEEEEEecccc
Q 014490 50 YWMVNIRRKIHENPELGFQE-------FETSKLIRAELDQMGIPYKFP-----VAVTGVVGYIGTGQPPFVALRADMDAL 117 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~~E-------~~~~~~l~~~l~~~g~~~~~~-----~~~~nvia~~~~~~~~~ill~~H~Dtv 117 (423)
+++++++++|++|||+|++| .++++||.++|+++|++++.. ..++|++++++++ .++|+|+||||||
T Consensus 5 ~~~i~~l~~lv~i~s~s~~e~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~nvia~~g~~-~~~il~~~H~Dvv 83 (383)
T PRK05111 5 PSFIEMYRALIATPSISATDPALDQSNRAVIDLLAGWFEDLGFNVEIQPVPGTRGKFNLLASLGSG-EGGLLLAGHTDTV 83 (383)
T ss_pred hHHHHHHHHHhCcCCcCCCCcccccchHHHHHHHHHHHHHCCCeEEEEecCCCCCCceEEEEeCCC-CCeEEEEeeecee
Confidence 57999999999999999876 569999999999999987652 1467999999543 3689999999999
Q ss_pred cCcCCCCCc---cc-CCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHhcCCCc
Q 014490 118 AMEESVEWE---HK-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALE 189 (423)
Q Consensus 118 p~~~~~~w~---~~-~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~~~~~~~~ 189 (423)
|+++ ..|. |. .++||++||||+ ||+++++|.|+++|++. .++++|.|+|+++|| |+.|++++++++.++
T Consensus 84 p~~~-~~W~~~Pf~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~i~~~~~~~EE~g~~G~~~~~~~~~~~ 160 (383)
T PRK05111 84 PFDE-GRWTRDPFTLTEHDGKLYGLGTADMKGFFAFILEALRDIDLT--KLKKPLYILATADEETSMAGARAFAEATAIR 160 (383)
T ss_pred cCCC-CcCcCCCCccEEECCEEEecccccccHHHHHHHHHHHHHhhc--CCCCCeEEEEEeccccCcccHHHHHhcCCCC
Confidence 9864 5675 44 467899999997 89999999999999875 367899999999999 778999999887654
Q ss_pred ccceeeeeccCCCCCCceEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhc----ccCCC--
Q 014490 190 NVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVS----READP-- 263 (423)
Q Consensus 190 ~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~----~~~~~-- 263 (423)
.|++++ ++|++.. +..+++|..+++|+++|+++|+|.|+.|.|||..+++++.+|+.+.. +...+
T Consensus 161 -~d~~i~-----~ep~~~~---~~~~~~G~~~~~i~v~G~~~H~~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~ 231 (383)
T PRK05111 161 -PDCAII-----GEPTSLK---PVRAHKGHMSEAIRITGQSGHSSDPALGVNAIELMHDVIGELLQLRDELQERYHNPAF 231 (383)
T ss_pred -CCEEEE-----cCCCCCc---eeecccceEEEEEEEEeechhccCCccCcCHHHHHHHHHHHHHHHHHHHhccCCCccC
Confidence 466664 3455431 23456799999999999999999999999999999999999987642 11111
Q ss_pred -CCCceEEEEEEecCCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCcc--ccCH
Q 014490 264 -LDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVT--VNNK 340 (423)
Q Consensus 264 -~~~~t~~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~ 340 (423)
...+++|++.|+||...|+||++|++.+|+|+.|.++.+++.++|++++++.+..++.+++++.. ...+|++ +.++
T Consensus 232 ~~~~~t~~i~~i~gg~~~NvVP~~~~~~~diR~~p~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 310 (383)
T PRK05111 232 TVPYPTLNLGHIHGGDAPNRICGCCELHFDIRPLPGMTLEDLRGLLREALAPVSERWPGRITVAPL-HPPIPGYECPADH 310 (383)
T ss_pred CCCCCceeEeeeecCCcCcccCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhhCCCeEEEecc-ccCCCCcCCCCCC
Confidence 23579999999999999999999999999999999999999999999999888877777776542 2344443 4456
Q ss_pred HHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhh-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHH
Q 014490 341 NLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHAS 419 (423)
Q Consensus 341 ~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~ 419 (423)
++++.+++++ |..+ ...++++|+.++... +|++++ | ||....+|++||++++++|.+++++|+.
T Consensus 311 ~l~~~~~~~~----g~~~----~~~~~~~Da~~~~~~g~p~v~~--G-----~g~~~~~H~~~E~v~~~~l~~~~~i~~~ 375 (383)
T PRK05111 311 QLVRVVEKLL----GHKA----EVVNYCTEAPFIQQLGCPTLVL--G-----PGSIEQAHQPDEYLELSFIKPTRELLRQ 375 (383)
T ss_pred HHHHHHHHHh----CCCC----ceeeeeccHHHHHhcCCCEEEE--C-----CCchHhCcCCCCcccHHHHHHHHHHHHH
Confidence 7777765543 5543 234578999998876 887765 4 3334569999999999999999999999
Q ss_pred HHh
Q 014490 420 LAT 422 (423)
Q Consensus 420 ~i~ 422 (423)
++.
T Consensus 376 ~~~ 378 (383)
T PRK05111 376 LIH 378 (383)
T ss_pred HHH
Confidence 875
No 21
>PRK07522 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=5.5e-51 Score=403.63 Aligned_cols=346 Identities=19% Similarity=0.258 Sum_probs=277.8
Q ss_pred HHHHHHHHHhHhCCCCCCCc-HHHHHHHHHHHHhCCCCeEec----ccCceEEEEECCCCCcEEEEEEecccccCcCCCC
Q 014490 50 YWMVNIRRKIHENPELGFQE-FETSKLIRAELDQMGIPYKFP----VAVTGVVGYIGTGQPPFVALRADMDALAMEESVE 124 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~~E-~~~~~~l~~~l~~~g~~~~~~----~~~~nvia~~~~~~~~~ill~~H~Dtvp~~~~~~ 124 (423)
.++++++++|++|||+|++| .++++||.++|+++|++++.. ..++||+++++++.+|+|+|+||+||||+++ ..
T Consensus 4 ~~~~~~l~~lv~i~S~s~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~nv~a~~~~~~~~~ill~~H~Dtv~~~~-~~ 82 (385)
T PRK07522 4 MSSLDILERLVAFDTVSRDSNLALIEWVRDYLAAHGVESELIPDPEGDKANLFATIGPADRGGIVLSGHTDVVPVDG-QA 82 (385)
T ss_pred hhHHHHHHHHhCCCCcCCCccHHHHHHHHHHHHHcCCeEEEEecCCCCcccEEEEeCCCCCCeEEEEeecccccCCC-CC
Confidence 56889999999999999887 599999999999999997652 3468999999755568999999999999875 47
Q ss_pred Cccc----CCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHhcCCC--ccccee
Q 014490 125 WEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGAL--ENVEAI 194 (423)
Q Consensus 125 w~~~----~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~~~~~~~--~~~d~~ 194 (423)
|.++ .++||++||||+ ||+++++|.|+++|++.+ ++++|.|+|+++|| |+.|++++++.... ...|++
T Consensus 83 W~~~pf~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~~--~~~~i~~~~~~dEE~g~~G~~~l~~~~~~~~~~~d~~ 160 (385)
T PRK07522 83 WTSDPFRLTERDGRLYGRGTCDMKGFIAAALAAVPELAAAP--LRRPLHLAFSYDEEVGCLGVPSMIARLPERGVKPAGC 160 (385)
T ss_pred CCCCCCceEEECCEEEeccccccchHHHHHHHHHHHHHhCC--CCCCEEEEEEeccccCCccHHHHHHHhhhcCCCCCEE
Confidence 8543 346899999997 999999999999998764 67899999999999 77999999875321 135666
Q ss_pred eeeccCCCCCCceEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhcccCC--C------CCC
Q 014490 195 FGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREAD--P------LDS 266 (423)
Q Consensus 195 i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~--~------~~~ 266 (423)
+. ++|++. ....+++|..+++|+++|+++|+|.|+.|.||+..+++++..|+++..+... + ...
T Consensus 161 i~-----~ep~~~---~~~~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~ 232 (385)
T PRK07522 161 IV-----GEPTSM---RPVVGHKGKAAYRCTVRGRAAHSSLAPQGVNAIEYAARLIAHLRDLADRLAAPGPFDALFDPPY 232 (385)
T ss_pred EE-----ccCCCC---eeeeeecceEEEEEEEEeeccccCCCccCcCHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCc
Confidence 54 345542 2234567999999999999999999999999999999999999887532211 1 113
Q ss_pred ceEEEEEEecCCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHH------HHHhcCCeEEEEeeccCCCCcccc--
Q 014490 267 QVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMK------QASVQRCNATVTFDDKSFYPVTVN-- 338 (423)
Q Consensus 267 ~t~~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~-- 338 (423)
++++++.|+||...|+||++|++.+|+|++|+++.+++.++|++++++ .+...+++++++. ...++++..
T Consensus 233 ~t~~i~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~i~~~i~~~i~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~~~ 310 (385)
T PRK07522 233 STLQTGTIQGGTALNIVPAECEFDFEFRNLPGDDPEAILARIRAYAEAELLPEMRAVHPEAAIEFEP--LSAYPGLDTAE 310 (385)
T ss_pred ceeEEeeeecCccccccCCceEEEEEEccCCCCCHHHHHHHHHHHHHhhcchhhhhhcCCCcEEEEe--ccCCCCCCCCC
Confidence 689999999999999999999999999999999999999999999987 2344566776665 445666644
Q ss_pred CHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhh-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHH
Q 014490 339 NKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALH 417 (423)
Q Consensus 339 d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~ 417 (423)
++++++.+++++ +... .....+++|+++|... +|++.+ | ||+...+|++||++++++|.+++++|
T Consensus 311 ~~~~v~~~~~~~----~~~~---~~~~~~~td~~~~~~~gip~v~~--G-----pg~~~~~H~~~E~i~i~~l~~~~~~~ 376 (385)
T PRK07522 311 DAAAARLVRALT----GDND---LRKVAYGTEAGLFQRAGIPTVVC--G-----PGSIEQAHKPDEFVELAQLAACEAFL 376 (385)
T ss_pred CcHHHHHHHHHh----CCCC---cceEeeecchHHhccCCCCEEEE--C-----CCChhhCCCCCccccHHHHHHHHHHH
Confidence 477888776654 4322 1235678999999876 887655 4 45556799999999999999999999
Q ss_pred HHHHh
Q 014490 418 ASLAT 422 (423)
Q Consensus 418 ~~~i~ 422 (423)
+.++.
T Consensus 377 ~~~~~ 381 (385)
T PRK07522 377 RRLLA 381 (385)
T ss_pred HHHHH
Confidence 99875
No 22
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase. This model represents a family of eukaryotic N-acyl-L-amino-acid amidohydrolases active on fatty acid and acetyl amides of L-amino acids.
Probab=100.00 E-value=1.4e-50 Score=402.30 Aligned_cols=359 Identities=17% Similarity=0.181 Sum_probs=281.3
Q ss_pred HHHHHHHHHhHhCCCCCCC--cHHHHHHHHHHHHhCCCCeEec---ccCceEEEEECCC-C-CcEEEEEEecccccCcCC
Q 014490 50 YWMVNIRRKIHENPELGFQ--EFETSKLIRAELDQMGIPYKFP---VAVTGVVGYIGTG-Q-PPFVALRADMDALAMEES 122 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~~--E~~~~~~l~~~l~~~g~~~~~~---~~~~nvia~~~~~-~-~~~ill~~H~Dtvp~~~~ 122 (423)
++++++|++|++|||++++ |.++++||.++|+++|++++.. ..++|++++++++ + .|+|+|+|||||||+++
T Consensus 9 ~~~~~~l~~lv~ipS~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~g~~~l~~~~~g~~~~~~~i~l~~H~DvVp~~~- 87 (400)
T TIGR01880 9 DIAVTRFREYLRINTVQPNPDYAACVDFLIKQADELGLARKTIEFVPGKPVVVLTWPGSNPELPSILLNSHTDVVPVFR- 87 (400)
T ss_pred HHHHHHHHHHhccCccCCCccHHHHHHHHHHHHHhCCCceeEEEecCCceeEEEEEecCCCCCCeEEEEcccccCCCCc-
Confidence 7789999999999999865 6789999999999999987642 3578999999543 3 38999999999999876
Q ss_pred CCCcc---cC--CCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Cc-ccHHHHHhcCCCcccc
Q 014490 123 VEWEH---KS--KVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG-GGAKKMLDAGALENVE 192 (423)
Q Consensus 123 ~~w~~---~~--~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~-~Ga~~~~~~~~~~~~d 192 (423)
..|.+ .. ++||++||||+ |++++++|.|+++|++.+..++++|.|+|+++|| |+ .|++++++++.+.+.|
T Consensus 88 ~~W~~~Pf~~~~~~dg~iyGrG~~D~K~~~aa~l~a~~~l~~~~~~~~~~v~l~~~~dEE~g~~~G~~~~~~~~~~~~~~ 167 (400)
T TIGR01880 88 EHWTHPPFSAFKDEDGNIYARGAQDMKCVGVQYLEAVRNLKASGFKFKRTIHISFVPDEEIGGHDGMEKFAKTDEFKALN 167 (400)
T ss_pred ccCccCCccceecCCCeEEEcccccccHHHHHHHHHHHHHHHcCCCCCceEEEEEeCCcccCcHhHHHHHHHhhhccCCc
Confidence 46754 32 35899999998 8999999999999999887889999999999999 55 5999999887666667
Q ss_pred eeeeeccCCCCCCceEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhcc---------cCCC
Q 014490 193 AIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSR---------EADP 263 (423)
Q Consensus 193 ~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~---------~~~~ 263 (423)
..++++....+|++.. ..+.+++|..+++|+++|+++|++.+. +.||+..|++++..|+.+... ....
T Consensus 168 ~~~~~d~g~~~~~~~~--~i~~~~kG~~~~~l~v~G~~~Hs~~~~-~~nai~~l~~~i~~l~~~~~~~~~~~~~~~~~~~ 244 (400)
T TIGR01880 168 LGFALDEGLASPDDVY--RVFYAERVPWWVVVTAPGNPGHGSKLM-ENTAMEKLEKSVESIRRFRESQFQLLQSNPDLAI 244 (400)
T ss_pred eEEEEcCCCccccccc--ceeEEeeEEEEEEEEEecCCCCCCCCC-CCCHHHHHHHHHHHHHHhhHHHHHHHhcCccccc
Confidence 7776643222344421 334567899999999999999999864 479999999999988765311 0111
Q ss_pred CCCceEEEEEEecCCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCC-ccccCHHH
Q 014490 264 LDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYP-VTVNNKNL 342 (423)
Q Consensus 264 ~~~~t~~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~ 342 (423)
...++++++.|+||...|+||++|++.+|+|++|.++.+++.+.|++++++. ..+++++++.....+++ +.+.++++
T Consensus 245 ~~~~t~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~~~~~i~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l 322 (400)
T TIGR01880 245 GDVTSVNLTKLKGGVQSNVIPSEAEAGFDIRLAPSVDFEEMENRLDEWCADA--GEGVTYEFSQHSGKPLVTPHDDSNPW 322 (400)
T ss_pred cccceeecceeccCCcCCcCCCccEEEEEEeeCCCCCHHHHHHHHHHHHhcc--CCceEEEEeecCCCCCCCCCCCCCHH
Confidence 1247999999999999999999999999999999999999999999999863 12444554331111111 22346789
Q ss_pred HHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhh-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHH
Q 014490 343 HEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLA 421 (423)
Q Consensus 343 ~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i 421 (423)
++.+++++++. +... .+....|++|++++.+. +|++++++| . +....+|++||++++++|.+++++|++++
T Consensus 323 v~~l~~a~~~~-~~~~--~~~~~~g~tDa~~~~~~gip~v~fgp~--~---~~~~~aH~~dE~i~i~~l~~~~~~~~~~l 394 (400)
T TIGR01880 323 WVAFKDAVKEM-GCTF--KPEILPGSTDSRYIRAAGVPALGFSPM--N---NTPVLLHDHNEFLNEAVFLRGIEIYQTLI 394 (400)
T ss_pred HHHHHHHHHHc-CCee--cceeecCcchHHHHHhCCCCeEEECCc--c---CCcccccCCCCceEHHHHHHHHHHHHHHH
Confidence 99999999986 6543 23467899999999987 898654432 1 11246999999999999999999999988
Q ss_pred h
Q 014490 422 T 422 (423)
Q Consensus 422 ~ 422 (423)
.
T Consensus 395 ~ 395 (400)
T TIGR01880 395 S 395 (400)
T ss_pred H
Confidence 5
No 23
>PRK09133 hypothetical protein; Provisional
Probab=100.00 E-value=3.6e-50 Score=407.14 Aligned_cols=354 Identities=18% Similarity=0.179 Sum_probs=278.6
Q ss_pred HHHHHHHHHhHhCCCCC--CCcHHHHHHHHHHHHhCCCCeEe------cccCceEEEEECCC-CCcEEEEEEecccccCc
Q 014490 50 YWMVNIRRKIHENPELG--FQEFETSKLIRAELDQMGIPYKF------PVAVTGVVGYIGTG-QPPFVALRADMDALAME 120 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s--~~E~~~~~~l~~~l~~~g~~~~~------~~~~~nvia~~~~~-~~~~ill~~H~Dtvp~~ 120 (423)
+++++++++|++|||++ ++|.++++||.++|+++|++++. ...++|+++++++. ++|+|+|+|||||||++
T Consensus 37 ~~~~~~l~~Lv~i~S~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~nli~~~~g~~~~~~lll~~H~DtVp~~ 116 (472)
T PRK09133 37 QAARDLYKELIEINTTASTGSTTPAAEAMAARLKAAGFADADIEVTGPYPRKGNLVARLRGTDPKKPILLLAHMDVVEAK 116 (472)
T ss_pred HHHHHHHHHHhccCCCCCCcchHHHHHHHHHHHHHcCCCceEEEeccCCCCceeEEEEecCCCCCCcEEEEeecccCCCC
Confidence 77999999999999998 67899999999999999998532 23578999999653 35899999999999986
Q ss_pred CCCCCccc----CCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC--CcccHHHHHhcCCC-cc
Q 014490 121 ESVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE--GGGGAKKMLDAGAL-EN 190 (423)
Q Consensus 121 ~~~~w~~~----~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE--g~~Ga~~~~~~~~~-~~ 190 (423)
+ .+|.++ .++||+|||||+ ||+++++|.|+++|++.+..++++|.|+|+++|| |+.|++.++++... -+
T Consensus 117 ~-~~W~~dPf~~~~~dg~iyGRGa~D~Kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~g~~G~~~l~~~~~~~~~ 195 (472)
T PRK09133 117 R-EDWTRDPFKLVEENGYFYGRGTSDDKADAAIWVATLIRLKREGFKPKRDIILALTGDEEGTPMNGVAWLAENHRDLID 195 (472)
T ss_pred h-hcCCCCCCcceEeCCEEEecCcccchHHHHHHHHHHHHHHhcCCCCCCCEEEEEECccccCccchHHHHHHHHhhccC
Confidence 5 468754 467899999998 8999999999999998887889999999999999 45899999876431 13
Q ss_pred cceeeeeccCC------CCCCceEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhccc----
Q 014490 191 VEAIFGLHVSS------LFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSRE---- 260 (423)
Q Consensus 191 ~d~~i~~~~~~------~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~---- 260 (423)
.|++++ +... ++|+.. ....+++|..+++|+++|+++|||.|+ +.|||..++++|.+|+++..+.
T Consensus 196 ~~~~i~-e~~~~~~~~~gept~~---~i~~g~kG~~~~~i~v~G~~~Hss~p~-~~nAi~~l~~~l~~l~~~~~~~~~~~ 270 (472)
T PRK09133 196 AEFALN-EGGGGTLDEDGKPVLL---TVQAGEKTYADFRLEVTNPGGHSSRPT-KDNAIYRLAAALSRLAAYRFPVMLND 270 (472)
T ss_pred eEEEEE-CCCccccCCCCCceEE---EeeeecceeEEEEEEEecCCCCCCCCC-CCChHHHHHHHHHHHhhCCCCCccCC
Confidence 466665 3321 233322 234667899999999999999999996 5899999999999998642100
Q ss_pred --------------------------------------CCC----CCCceEEEEEEecCCCCccCCCcEEEEEEEecCCh
Q 014490 261 --------------------------------------ADP----LDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSK 298 (423)
Q Consensus 261 --------------------------------------~~~----~~~~t~~v~~i~gg~~~n~iP~~a~~~~d~R~~~~ 298 (423)
.++ ...+++|++.|+||...|+||++|++.+|+|++|+
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~gG~~~NvVP~~a~~~lDiR~~p~ 350 (472)
T PRK09133 271 VTRAYFKQSAAIETGPLAAAMRAFAANPADEAAIALLSADPSYNAMLRTTCVATMLEGGHAENALPQRATANVNCRIFPG 350 (472)
T ss_pred ccHHHHHHHHHhCCchHHHHHHHHhcCcchHHHHHHHhcCcchhheeeeeEEeeEEecCCcCccCCCceEEEEEEEeCCc
Confidence 000 13578999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCeEEEEeecc-CCCCccccCHHHHHHHHHHHHHhc-CCcccccCCCCCCCchHHHHHh
Q 014490 299 ESIIQLKQRIEEVVMKQASVQRCNATVTFDDK-SFYPVTVNNKNLHEHFQKVAADML-GVQNIKENRPLMGTEDFSFFAE 376 (423)
Q Consensus 299 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~l~~~~~~~~-g~~~~~~~~~~~g~tD~~~~~~ 376 (423)
++.+++.++|++++++ .+ ++++.... ...++.+.++++++.+++++++.+ |... .+...+|+||++++..
T Consensus 351 ~~~e~v~~~I~~~i~~----~~--v~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~g~~~--~~~~~~ggtDa~~~~~ 422 (472)
T PRK09133 351 DTIEAVRATLKQVVAD----PA--IKITRIGDPSPSPASPLRPDIMKAVEKLTAAMWPGVPV--IPSMSTGATDGRYLRA 422 (472)
T ss_pred hhHHHHHHHHHHHhcC----CC--EEEEEccCCCCCCCCCCCcHHHHHHHHHHHHHCCCCce--eccccccccchHHHHh
Confidence 9999999999998863 23 34433212 122344556789999999999887 5433 3346788999999987
Q ss_pred h-cCeEEEE--eccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 377 A-IPGYFYY--LGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 377 ~-ip~~~~~--~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
. +|++.++ +| |+....+|++|||++++++.+++++|+.++.
T Consensus 423 ~gip~~~~~~i~g-----p~~~~~aH~~dE~v~i~~l~~~~~~l~~~l~ 466 (472)
T PRK09133 423 AGIPTYGVSGLFG-----DPDDTFAHGLNERIPVASFYEGRDFLYELVK 466 (472)
T ss_pred cCCCceeecCccc-----CcccccCCCCCCceeHHHHHHHHHHHHHHHH
Confidence 6 8875321 23 4555679999999999999999999999875
No 24
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=3.6e-50 Score=398.92 Aligned_cols=347 Identities=21% Similarity=0.312 Sum_probs=284.0
Q ss_pred HHHHHHHHHhHhCCCCC---CCcHHHHHHHHHHHHhCCCCeEecc---c--------CceEEEEECCCCCcEEEEEEecc
Q 014490 50 YWMVNIRRKIHENPELG---FQEFETSKLIRAELDQMGIPYKFPV---A--------VTGVVGYIGTGQPPFVALRADMD 115 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s---~~E~~~~~~l~~~l~~~g~~~~~~~---~--------~~nvia~~~~~~~~~ill~~H~D 115 (423)
+++++++++|++|||+| ++|.++++||+++|+++|++++... . ++|+++..++++ |+|+|+||+|
T Consensus 6 ~~~~~~l~~lv~i~S~s~~~~~~~~~a~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ill~~HlD 84 (394)
T PRK08651 6 FDIVEFLKDLIKIPTVNPPGENYEEIAEFLRDTLEELGFSTEIIEVPNEYVKKHDGPRPNLIARRGSGN-PHLHFNGHYD 84 (394)
T ss_pred HHHHHHHHHHhcCCccCCCCcCHHHHHHHHHHHHHHcCCeEEEEecCccccccccCCcceEEEEeCCCC-ceEEEEeeee
Confidence 88999999999999998 5678999999999999999876621 1 246788765444 9999999999
Q ss_pred cccCcCCCCCc---cc-CCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHhcCC
Q 014490 116 ALAMEESVEWE---HK-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGA 187 (423)
Q Consensus 116 tvp~~~~~~w~---~~-~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~~~~~~ 187 (423)
|||.++.. |. |+ ..++|++||||+ |++++++|.|++.|++.+ +++|.|+|+++|| |+.|++++++++.
T Consensus 85 tvp~~~~~-~~~~Pf~~~~~~~~~~grG~~D~k~~~~~~l~a~~~l~~~~---~~~v~~~~~~~EE~g~~G~~~~~~~~~ 160 (394)
T PRK08651 85 VVPPGEGW-SVNVPFEPKVKDGKVYGRGASDMKGGIAALLAAFERLDPAG---DGNIELAIVPDEETGGTGTGYLVEEGK 160 (394)
T ss_pred eecCCCCc-cccCCCCcEEECCEEEecCccccchHHHHHHHHHHHHHhcC---CCCEEEEEecCccccchhHHHHHhccC
Confidence 99987532 44 44 346899999998 899999999999998765 7999999999999 6789999998876
Q ss_pred CcccceeeeeccCCCCCCc--eEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhcccC----
Q 014490 188 LENVEAIFGLHVSSLFPVG--TVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREA---- 261 (423)
Q Consensus 188 ~~~~d~~i~~~~~~~~p~g--~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~---- 261 (423)
++ +|++++.+ |++ .+. .+++|..+++|+++|+++|++.|+.|.|||..+++++.+|+.+..+..
T Consensus 161 ~~-~d~~i~~~-----~~~~~~i~----~~~~G~~~~~i~v~G~~~H~~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~ 230 (394)
T PRK08651 161 VT-PDYVIVGE-----PSGLDNIC----IGHRGLVWGVVKVYGKQAHASTPWLGINAFEAAAKIAERLKSSLSTIKSKYE 230 (394)
T ss_pred CC-CCEEEEec-----CCCCCceE----EecccEEEEEEEEEEeccccCCCccccCHHHHHHHHHHHHHHHHHhhhcccc
Confidence 53 56666532 333 232 345799999999999999999999999999999999999987542211
Q ss_pred --C-CCCCceEEEEE--EecCCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCcc
Q 014490 262 --D-PLDSQVLTVAK--FEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVT 336 (423)
Q Consensus 262 --~-~~~~~t~~v~~--i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (423)
+ .....+++++. ++||...|+||++|++.+|+|+.|.++.+++.++|++++++.+.+++++++++. ...++++
T Consensus 231 ~~~~~~~~~~~~ig~~~i~gG~~~nviP~~a~~~~diR~~~~~~~e~i~~~i~~~~~~~~~~~~~~~~i~~--~~~~~~~ 308 (394)
T PRK08651 231 YDDERGAKPTVTLGGPTVEGGTKTNIVPGYCAFSIDRRLIPEETAEEVRDELEALLDEVAPELGIEVEFEI--TPFSEAF 308 (394)
T ss_pred ccccccCCCceeecceeeeCCCCCCccCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHHHhhccCCCeeEEE--ecccCCc
Confidence 1 12346788888 999999999999999999999999999999999999999998887787777765 3344444
Q ss_pred --ccCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhh-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHH
Q 014490 337 --VNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYG 413 (423)
Q Consensus 337 --~~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~ 413 (423)
+.++++++.+++++++.+|.++ .+....|++|+++|... +|++++ | ||....+|++||+++++++.++
T Consensus 309 ~~~~~~~l~~~~~~a~~~~~g~~~--~~~~~~g~tD~~~~~~~gip~v~~--G-----pg~~~~~H~~~E~i~~~~l~~~ 379 (394)
T PRK08651 309 VTDPDSELVKALREAIREVLGVEP--KKTISLGGTDARFFGAKGIPTVVY--G-----PGELELAHAPDEYVEVKDVEKA 379 (394)
T ss_pred cCCCCCHHHHHHHHHHHHHhCCCC--ceeeecCcccHHHHhhCCCcEEEE--C-----CCChHhcCCCCceeEHHHHHHH
Confidence 3456899999999999778765 33467899999999988 998655 4 4444579999999999999999
Q ss_pred HHHHHHHHh
Q 014490 414 AALHASLAT 422 (423)
Q Consensus 414 ~~~~~~~i~ 422 (423)
+++|..++.
T Consensus 380 ~~i~~~~i~ 388 (394)
T PRK08651 380 AKVYEEVLK 388 (394)
T ss_pred HHHHHHHHH
Confidence 999999875
No 25
>PRK08201 hypothetical protein; Provisional
Probab=100.00 E-value=4.1e-50 Score=405.24 Aligned_cols=369 Identities=15% Similarity=0.139 Sum_probs=282.9
Q ss_pred hHHHHhhcCchhHHHHHHHHHHhHhCCCCCC------CcHHHHHHHHHHHHhCCCC-eEe--cccCceEEEEECC-CCCc
Q 014490 37 VKFLDFAKKPEIFYWMVNIRRKIHENPELGF------QEFETSKLIRAELDQMGIP-YKF--PVAVTGVVGYIGT-GQPP 106 (423)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~l~~ips~s~------~E~~~~~~l~~~l~~~g~~-~~~--~~~~~nvia~~~~-~~~~ 106 (423)
+++.++++.+. +++++++++|++|||+++ +|.++++||+++|+++||+ ++. ...++||++++.+ +++|
T Consensus 3 ~~~~~~~~~~~--~~~~~~l~~LV~i~Svs~~~~~~~~~~~~a~~l~~~l~~~G~~~~~~~~~~~~~~l~a~~~~~~~~~ 80 (456)
T PRK08201 3 QQVEAYLRERR--EAHLEELKEFLRIPSISALSEHKEDVRKAAEWLAGALEKAGLEHVEIMETAGHPIVYADWLHAPGKP 80 (456)
T ss_pred hHHHHHHHHHH--HHHHHHHHHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHcCCCeEEEEecCCCCEEEEEecCCCCCC
Confidence 36777788877 899999999999999995 4578999999999999997 433 2356799998854 3458
Q ss_pred EEEEEEecccccCcCCCCCccc----CCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Cccc
Q 014490 107 FVALRADMDALAMEESVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGG 178 (423)
Q Consensus 107 ~ill~~H~Dtvp~~~~~~w~~~----~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G 178 (423)
+|+|+||+||||+++...|+++ .++||++||||+ ||+++++|.|+++|++.+..++++|.|+|++||| |+.|
T Consensus 81 ~lll~gH~DvVp~~~~~~W~~dPf~~~~~~g~lyGRG~~DmKgglaa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g 160 (456)
T PRK08201 81 TVLIYGHYDVQPVDPLNLWETPPFEPTIRDGKLYARGASDDKGQVFMHLKAVEALLKVEGTLPVNVKFCIEGEEEIGSPN 160 (456)
T ss_pred EEEEEeccCCcCCCchhcccCCCCceEeECCEEEEEecccCcHHHHHHHHHHHHHHHhcCCCCCCEEEEEEcccccCCcc
Confidence 9999999999999877789654 467899999997 8999999999999987666788899999999999 8889
Q ss_pred HHHHHhcCC--CcccceeeeeccCCCCCCceEEeecCcccCcceEEEEEEEeCCC--CCCCCCC-CCcHHHHHHHHHHHH
Q 014490 179 AKKMLDAGA--LENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGG--HAAIPQH-TIDPIVAASNVIVSL 253 (423)
Q Consensus 179 a~~~~~~~~--~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~--Hs~~p~~-g~nAi~~~~~~i~~l 253 (423)
+.+++++.. + ..|++++.++....+... ...++++|..+++|+++|+++ |||.|.. +.|||..|++++.+|
T Consensus 161 ~~~~l~~~~~~~-~~d~~ii~e~~~~~~~~~---~i~~g~kG~~~~~l~v~G~~~~~Hs~~~~~~~~nAi~~~~~~l~~l 236 (456)
T PRK08201 161 LDSFVEEEKDKL-AADVVLISDTTLLGPGKP---AICYGLRGLAALEIDVRGAKGDLHSGLYGGAVPNALHALVQLLASL 236 (456)
T ss_pred HHHHHHhhHHhc-cCCEEEEeCCCcCCCCCE---EEEEecCCeEEEEEEEEeCCCCCccccccCcCCCHHHHHHHHHHhc
Confidence 998887532 2 346777644322111111 124667899999999999998 9987554 579999999999999
Q ss_pred HHhhccc-----------------------------------CCC-------------CCCceEEEEEEecCC----CCc
Q 014490 254 QHLVSRE-----------------------------------ADP-------------LDSQVLTVAKFEGGG----AFN 281 (423)
Q Consensus 254 ~~~~~~~-----------------------------------~~~-------------~~~~t~~v~~i~gg~----~~n 281 (423)
+++..+. .++ ...+|+|++.|+||. ..|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~gg~~~~~~~N 316 (456)
T PRK08201 237 HDEHGTVAVEGFYDGVRPLTPEEREEFAALGFDEEKLKRELGVDELFGEEGYTALERTWARPTLELNGVYGGFQGEGTKT 316 (456)
T ss_pred CCCCCCEecCCcccCCCCCCHHHHHHHHhCCCCHHHHHhhcCCccccCCcchHHHHHHHhCCcEEEEeeecCCCCCCCce
Confidence 7642100 000 013589999998874 379
Q ss_pred cCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCcc--ccCHHHHHHHHHHHHHhcCCccc
Q 014490 282 IIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVT--VNNKNLHEHFQKVAADMLGVQNI 359 (423)
Q Consensus 282 ~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~~~~~~l~~~~~~~~g~~~~ 359 (423)
+||++|++++|+|++|+++.+++.++|++++++.. ..+.++++.. ...++++ +.++++++.+.+++++.+|.++.
T Consensus 317 vVP~~a~~~~diR~~p~~~~e~v~~~i~~~l~~~~-~~~~~v~~~~--~~~~~~~~~~~~~~~~~~l~~a~~~~~g~~~~ 393 (456)
T PRK08201 317 VIPAEAHAKITCRLVPDQDPQEILDLIEAHLQAHT-PAGVRVTIRR--FDKGPAFVAPIDHPAIQAAARAYEAVYGTEAA 393 (456)
T ss_pred EECcceEEEEEEEeCCCCCHHHHHHHHHHHHHHhC-CCCeEEEEEE--CCCcCceecCCCCHHHHHHHHHHHHHhCCCce
Confidence 99999999999999999999999999999987632 2244555443 2334443 55689999999999998887653
Q ss_pred ccCCCCCCCc--hHHHHHhh-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 360 KENRPLMGTE--DFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 360 ~~~~~~~g~t--D~~~~~~~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
. ...+|+. |+.++... +|++++|+|.. ..++|++|||+++++|.+++++|+.++.
T Consensus 394 ~--~~~gg~~~~~~~~~~~~gip~v~~GpG~~------~~~~H~~nE~v~i~~l~~~~~~l~~~~~ 451 (456)
T PRK08201 394 F--TRMGGSIPVVETFSSQLHIPIVLMGFGLP------SENFHAPNEHFHLENFDKGLRTLVEYWH 451 (456)
T ss_pred e--cCCCCcHHHHHHHHHHhCCCEEEecCCCC------CCCCCCCCCCcCHHHHHHHHHHHHHHHH
Confidence 2 2333332 56666555 89877654421 2469999999999999999999999875
No 26
>PRK06446 hypothetical protein; Provisional
Probab=100.00 E-value=2.5e-50 Score=404.10 Aligned_cols=358 Identities=15% Similarity=0.196 Sum_probs=279.3
Q ss_pred HHHHHHHHHhHhCCCCCCC-c--HHHHHHHHHHHHhCCCCeEec--ccCceEEEEECCCCCcEEEEEEecccccCcCCCC
Q 014490 50 YWMVNIRRKIHENPELGFQ-E--FETSKLIRAELDQMGIPYKFP--VAVTGVVGYIGTGQPPFVALRADMDALAMEESVE 124 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~~-E--~~~~~~l~~~l~~~g~~~~~~--~~~~nvia~~~~~~~~~ill~~H~Dtvp~~~~~~ 124 (423)
+++++++++|++|||++++ | .++++||.++|+++|++++.. ..++|++++++++.+|+|+|+||+||||+++.+.
T Consensus 2 ~~~~~~l~eLV~i~S~s~~~~~~~~~a~~l~~~l~~~G~~ve~~~~~~~~~lia~~~~~~~~~vll~gH~DvVp~~~~~~ 81 (436)
T PRK06446 2 DEELYTLIEFLKKPSISATGEGIEETANYLKDTMEKLGIKANIERTKGHPVVYGEINVGAKKTLLIYNHYDVQPVDPLSE 81 (436)
T ss_pred hhHHHHHHHHhCCCCCCCCcHhHHHHHHHHHHHHHHCCCeEEEEecCCCCEEEEEecCCCCCEEEEEecccCCCCCcccc
Confidence 5688999999999999965 3 689999999999999998653 3578999999654468999999999999988778
Q ss_pred Cccc----CCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHhcCC-Ccccceee
Q 014490 125 WEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGA-LENVEAIF 195 (423)
Q Consensus 125 w~~~----~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~~~~~~-~~~~d~~i 195 (423)
|..+ .++||++||||+ ||+++++|.|++.|++.+ .++++|.|+|+++|| |+.|+++++++.. .-++|+++
T Consensus 82 W~~~Pf~~~~~dg~lyGRGa~DmKgglaa~l~A~~~l~~~~-~~~~~i~~~~~~dEE~g~~g~~~~l~~~~~~~~~d~vi 160 (436)
T PRK06446 82 WKRDPFSATIENGRIYARGASDNKGTLMARLFAIKHLIDKH-KLNVNVKFLYEGEEEIGSPNLEDFIEKNKNKLKADSVI 160 (436)
T ss_pred ccCCCCceEEECCEEEEEeccCCcHHHHHHHHHHHHHHHcC-CCCCCEEEEEEcccccCCHhHHHHHHHHHHHhCCCEEE
Confidence 9754 467999999998 899999999999887654 578899999999999 8889999886521 11357776
Q ss_pred eeccCCCCCCceEEeecCcccCcceEEEEEEEe--CCCCCCCCCCCCcHHHHHHHHHHHHHHhhccc-------------
Q 014490 196 GLHVSSLFPVGTVASRPGPTLAAGGFFEAVING--KGGHAAIPQHTIDPIVAASNVIVSLQHLVSRE------------- 260 (423)
Q Consensus 196 ~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G--~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~------------- 260 (423)
+ ++....+.+... ...+++|..|++++++| +++|||.|+.|.|||..+++++.+|.+.....
T Consensus 161 ~-E~~~~~~~~~~~--i~~~~kG~~~~~l~v~G~~~~~Hss~p~~g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 237 (436)
T PRK06446 161 M-EGAGLDPKGRPQ--IVLGVKGLLYVELVLRTGTKDLHSSNAPIVRNPAWDLVKLLSTLVDGEGRVLIPGFYDDVRELT 237 (436)
T ss_pred E-CCCCccCCCCeE--EEEecCeEEEEEEEEEeCCCCCCCCCCccCCCHHHHHHHHHHhhCCCCCCEEccchhcCCCCCC
Confidence 4 221111223211 23456899999999999 99999999999999999999999997542000
Q ss_pred ---------------------------C--------CCCCCceEEEEEEecC----CCCccCCCcEEEEEEEecCChhhH
Q 014490 261 ---------------------------A--------DPLDSQVLTVAKFEGG----GAFNIIPDSVTIGGTFRAFSKESI 301 (423)
Q Consensus 261 ---------------------------~--------~~~~~~t~~v~~i~gg----~~~n~iP~~a~~~~d~R~~~~~~~ 301 (423)
. .....+++|++.|+|| ...|+||++|++.+|+|++|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~t~nv~~i~~g~~~~~~~nvvP~~a~~~~d~R~~p~~~~ 317 (436)
T PRK06446 238 EEERELLKKYDIDVEELRKALGFKELKYSDREKIAEALLTEPTCNIDGFYSGYTGKGSKTIVPSRAFAKLDFRLVPNQDP 317 (436)
T ss_pred HHHHHHHHhCCCCHHHHHHHhCCccccCCCcccHHHHHHhCCcEEEeeeeccccCCCCCcEecCceEEEEEEEcCCCCCH
Confidence 0 0112478999999887 467999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCcc--ccCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHh-h-
Q 014490 302 IQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVT--VNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAE-A- 377 (423)
Q Consensus 302 ~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~-~- 377 (423)
+++.+.|++++++. +..++++. ....+|+ +.++++++.+++++++.+|.++... ...+|++|+++|.+ .
T Consensus 318 ~~v~~~l~~~~~~~----~~~~~~~~--~~~~~p~~~~~~~~~v~~l~~a~~~~~g~~~~~~-~~~~g~~d~~~~~~~~g 390 (436)
T PRK06446 318 YKIFELLKKHLQKV----GFNGEIIV--HGFEYPVRTSVNSKVVKAMIESAKRVYGTEPVVI-PNSAGTQPMGLFVYKLG 390 (436)
T ss_pred HHHHHHHHHHHHHc----CCCeEEEE--cCCcceeecCCCCHHHHHHHHHHHHHhCCCCcee-cCCCCcchHHHHHHHhC
Confidence 99999999998763 33455544 2233443 4578999999999999988866321 24456778888865 3
Q ss_pred cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 378 IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 378 ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
+|++++++|+.. + ..++|++||||++++|.+++++|..++.
T Consensus 391 ip~v~~~~g~g~---~-~~~~H~~dE~i~i~~l~~~~~~~~~~~~ 431 (436)
T PRK06446 391 IRDIVSAIGVGG---Y-YSNAHAPNENIRIDDYYKAIKHTEEFLK 431 (436)
T ss_pred CCcceeecccCC---C-CcCCcCCCCCcCHHHHHHHHHHHHHHHH
Confidence 888765555432 1 2479999999999999999999999985
No 27
>PRK08652 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=1.2e-49 Score=388.68 Aligned_cols=334 Identities=15% Similarity=0.132 Sum_probs=269.8
Q ss_pred HHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEecc--cCceEEEEECCCCCcEEEEEEecccccCcCCCCCcc
Q 014490 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPV--AVTGVVGYIGTGQPPFVALRADMDALAMEESVEWEH 127 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~~--~~~nvia~~~~~~~~~ill~~H~Dtvp~~~~~~w~~ 127 (423)
+++++++++|++|||+|++|.++++||.++|+++|++++... ...|+++ +++|+|+|+|||||||....
T Consensus 2 ~~~~~~~~~lv~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~----~~~~~i~l~~H~D~vp~~~~----- 72 (347)
T PRK08652 2 ERAKELLKQLVKIPSPSGQEDEIALHIMEFLESLGYDVHIESDGEVINIVV----NSKAELFVEVHYDTVPVRAE----- 72 (347)
T ss_pred hhHHHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCEEEEEecCceeEEEc----CCCCEEEEEccccccCCCCC-----
Confidence 568899999999999999999999999999999999987632 2456766 33589999999999997532
Q ss_pred cCCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHhcCCCcccceeeeeccCCCC
Q 014490 128 KSKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLF 203 (423)
Q Consensus 128 ~~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~~~~~~~~~~d~~i~~~~~~~~ 203 (423)
+..+||++||||+ |++++++|.|+++|++.. ++++|.|+|++||| |+.|++.+++.. ..|++++.+
T Consensus 73 ~~~~~g~iyGrG~~D~Kg~~a~~l~a~~~l~~~~--~~~~v~~~~~~dEE~g~~G~~~~~~~~---~~d~~i~~e----- 142 (347)
T PRK08652 73 FFVDGVYVYGTGACDAKGGVAAILLALEELGKEF--EDLNVGIAFVSDEEEGGRGSALFAERY---RPKMAIVLE----- 142 (347)
T ss_pred CEEECCEEEeccchhhhHHHHHHHHHHHHHhhcc--cCCCEEEEEecCcccCChhHHHHHHhc---CCCEEEEec-----
Confidence 1246799999998 899999999999998543 46799999999999 778999998752 236666543
Q ss_pred CCceEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEecCCCCccC
Q 014490 204 PVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNII 283 (423)
Q Consensus 204 p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gg~~~n~i 283 (423)
|++. ...++++|..+++|+++|+++|++.|+.|.|||..+++++..|+++........ .++++++.++||...|+|
T Consensus 143 p~~~---~i~~~~~g~~~~~i~~~G~~~H~s~p~~g~nAi~~~a~~i~~l~~~~~~~~~~~-~~~~~~~~i~gg~~~nvi 218 (347)
T PRK08652 143 PTDL---KVAIAHYGNLEAYVEVKGKPSHGACPESGVNAIEKAFEMLEKLKELLKALGKYF-DPHIGIQEIIGGSPEYSI 218 (347)
T ss_pred CCCC---ceeeecccEEEEEEEEEeeecccCCCCcCcCHHHHHHHHHHHHHHHHHhhhccc-CCCCcceeeecCCCCCcc
Confidence 3221 123456899999999999999999999999999999999999988753321111 246788889999999999
Q ss_pred CCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCccccCHHHHHHHHHHHHHhcCCcccccCC
Q 014490 284 PDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENR 363 (423)
Q Consensus 284 P~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~g~~~~~~~~ 363 (423)
|++|++.+|+|++|.++.+++.+++++++++ +++++++.. ..+..+.+.|+++++.++++++++ |.++ .+.
T Consensus 219 P~~~~~~~diR~~~~~~~~~v~~~i~~~~~~----~~v~~~~~~--~~~~~~~~~~~~lv~~l~~a~~~~-g~~~--~~~ 289 (347)
T PRK08652 219 PALCRLRLDARIPPEVEVEDVLDEIDPILDE----YTVKYEYTE--IWDGFELDEDEEIVQLLEKAMKEV-GLEP--EFT 289 (347)
T ss_pred CCcEEEEEEEEcCCCCCHHHHHHHHHHHHHh----cCceEEEec--cCCcccCCCCCHHHHHHHHHHHHh-CCCC--CcC
Confidence 9999999999999999999999999988864 355554433 222223456789999999999998 8765 334
Q ss_pred CCCCCchHHHHHhh-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 364 PLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 364 ~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
..+|++|+++|.+. +|++.+ | ||+...+|++|||+++++|.+++++|..++.
T Consensus 290 ~~~g~tDa~~~~~~gip~v~~--G-----pg~~~~~H~~nE~i~i~~l~~~~~~l~~~~~ 342 (347)
T PRK08652 290 VMRSWTDAINFRYNGTKTVVW--G-----PGELDLCHTKFERIDVREVEKAKEFLKALNE 342 (347)
T ss_pred cCCccchhHHHHHCCCCEEEE--C-----CCchhhcCCCCceeeHHHHHHHHHHHHHHHH
Confidence 67888999999887 998654 5 5555679999999999999999999999875
No 28
>PRK08262 hypothetical protein; Provisional
Probab=100.00 E-value=1.4e-49 Score=404.37 Aligned_cols=362 Identities=14% Similarity=0.147 Sum_probs=277.0
Q ss_pred HHHHHHHHHhHhCCCCCCCcH---------HHHHHHHHHHHhCCCCeEec-ccCceEEEEECCC-CC-cEEEEEEecccc
Q 014490 50 YWMVNIRRKIHENPELGFQEF---------ETSKLIRAELDQMGIPYKFP-VAVTGVVGYIGTG-QP-PFVALRADMDAL 117 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~~E~---------~~~~~l~~~l~~~g~~~~~~-~~~~nvia~~~~~-~~-~~ill~~H~Dtv 117 (423)
+++++++++|++|||+|++|. ++++||.++|+.+|++++.. ....|+++.+.++ ++ |+|+|+||+|||
T Consensus 44 ~~~v~~L~~lv~i~S~s~~~~~~~~~~~~~~~~~~L~~~~~~~g~~~~~~~~~~~~vv~~~~g~~~~~~~ill~gH~DvV 123 (486)
T PRK08262 44 DAAAERLSEAIRFRTISNRDRAEDDAAAFDALHAHLEESYPAVHAALEREVVGGHSLLYTWKGSDPSLKPIVLMAHQDVV 123 (486)
T ss_pred HHHHHHHHHhcccceeccCCCCcccHHHHHHHHHHHHHhChhhhceeEEEEECCccEEEEEECCCCCCCeEEEECccccc
Confidence 889999999999999998763 48899999999999976652 2336788887443 34 899999999999
Q ss_pred cCcCC--CCCc---cc-CCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHhcCC
Q 014490 118 AMEES--VEWE---HK-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGA 187 (423)
Q Consensus 118 p~~~~--~~w~---~~-~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~~~~~~ 187 (423)
|+++. ..|. |. .++||+|||||+ ||+++++|.|+++|++.+..++++|.|+|+++|| |+.|++++.+...
T Consensus 124 p~~~~~~~~W~~~Pf~~~~~dg~lyGRG~~D~Kg~~aa~L~A~~~l~~~~~~l~~~I~llf~~dEE~g~~G~~~l~~~l~ 203 (486)
T PRK08262 124 PVAPGTEGDWTHPPFSGVIADGYVWGRGALDDKGSLVAILEAAEALLAQGFQPRRTIYLAFGHDEEVGGLGARAIAELLK 203 (486)
T ss_pred CCCCCCcccCccCCCceEeeCCEEEecCccccchhHHHHHHHHHHHHHcCCCCCCeEEEEEecccccCCcCHHHHHHHHH
Confidence 98753 5695 43 467899999996 9999999999999999887889999999999999 7789998875311
Q ss_pred C--cccceee------eecc--CCCCCCceEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhh
Q 014490 188 L--ENVEAIF------GLHV--SSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLV 257 (423)
Q Consensus 188 ~--~~~d~~i------~~~~--~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~ 257 (423)
. ...++++ ..+. ..++|++.+ +++++|..+++|+++|+++|||.|+. .|||..++++|.+|+...
T Consensus 204 ~~~~~~~~~~~~~~~i~~~~~~~~~~p~~~i----~~~~kG~~~~~i~v~G~~~Hss~p~~-~nai~~l~~~l~~l~~~~ 278 (486)
T PRK08262 204 ERGVRLAFVLDEGGAITEGVLPGVKKPVALI----GVAEKGYATLELTARATGGHSSMPPR-QTAIGRLARALTRLEDNP 278 (486)
T ss_pred HhcCCEEEEEeCCceecccccCCCCceEEee----EEeeeeeEEEEEEEecCCCCCCCCCC-CCHHHHHHHHHHHHhhCC
Confidence 0 0223322 1111 113344433 44567999999999999999999988 999999999999998642
Q ss_pred ccc--------------------------------------------CCCCCCceEEEEEEecCCCCccCCCcEEEEEEE
Q 014490 258 SRE--------------------------------------------ADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTF 293 (423)
Q Consensus 258 ~~~--------------------------------------------~~~~~~~t~~v~~i~gg~~~n~iP~~a~~~~d~ 293 (423)
.+. ......+|+|++.|+||...|+||++|++.+|+
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~I~gG~~~NvIP~~a~~~~di 358 (486)
T PRK08262 279 LPMRLRGPVAEMFDTLAPEMSFAQRVVLANLWLFEPLLLRVLAKSPETAAMLRTTTAPTMLKGSPKDNVLPQRATATVNF 358 (486)
T ss_pred CCCccChHHHHHHHHHHHhcCHHHHHHhhcccchhhHHHHHHhcCCccceeEEeeeeeeEEecCCccccCCCccEEEEEE
Confidence 100 001235789999999999999999999999999
Q ss_pred ecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCccccCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHH
Q 014490 294 RAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSF 373 (423)
Q Consensus 294 R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~ 373 (423)
|++|+++.+++.++|++++++. ++++++......+..+.+.++++++.+++++++.+|.... .+...+|++|+++
T Consensus 359 R~~p~~~~~~i~~~i~~~~~~~----~~~v~~~~~~~~~~~~~~~~~~lv~~l~~a~~~~~g~~~~-~~~~~~g~tDa~~ 433 (486)
T PRK08262 359 RILPGDSVESVLAHVRRAVADD----RVEIEVLGGNSEPSPVSSTDSAAYKLLAATIREVFPDVVV-APYLVVGATDSRH 433 (486)
T ss_pred EeCCCCCHHHHHHHHHHHhccC----ceEEEEecCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCcc-ccceecccccHHH
Confidence 9999999999999999988753 4444433210122334456789999999999998774221 2345779999999
Q ss_pred HHhhcCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 374 FAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 374 ~~~~ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
|....|.++...+... .||+...+|++||++++++|.+++++|..++.
T Consensus 434 ~~~~~p~~~~~~~~~~-gpg~~~~~Ht~dE~i~i~~l~~~~~i~~~~l~ 481 (486)
T PRK08262 434 YSGISDNVYRFSPLRL-SPEDLARFHGTNERISVANYARMIRFYYRLIE 481 (486)
T ss_pred HHHhcCCeEEECCccC-CcccccCCCCCCCceeHHHHHHHHHHHHHHHH
Confidence 9877765543222222 26766789999999999999999999999875
No 29
>PRK07473 carboxypeptidase; Provisional
Probab=100.00 E-value=3.8e-48 Score=380.75 Aligned_cols=344 Identities=18% Similarity=0.122 Sum_probs=269.3
Q ss_pred HHHHHHHHHhHhCCCCCCCcH---HHHHHHHHHHHhCCCCeEecc---c-CceEEEEECCC--CCcEEEEEEecccccCc
Q 014490 50 YWMVNIRRKIHENPELGFQEF---ETSKLIRAELDQMGIPYKFPV---A-VTGVVGYIGTG--QPPFVALRADMDALAME 120 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~~E~---~~~~~l~~~l~~~g~~~~~~~---~-~~nvia~~~~~--~~~~ill~~H~Dtvp~~ 120 (423)
+++++++++|++|||++++|. ++++||.++|+++|++++... . .+|++++++++ .+|+|+|+||+||||..
T Consensus 11 ~~~~~~l~~Lv~i~S~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~gH~DtV~~~ 90 (376)
T PRK07473 11 EAMLAGLRPWVECESPTWDAAAVNRMLDLAARDMAIMGATIERIPGRQGFGDCVRARFPHPRQGEPGILIAGHMDTVHPV 90 (376)
T ss_pred HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEecCCCCCCCeEEEEeCCCCCCCCeEEEEecCCCCCCC
Confidence 789999999999999999885 677899999999999987632 2 25899998642 35899999999999753
Q ss_pred C-CCCCcccCCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHhcCCCcccceee
Q 014490 121 E-SVEWEHKSKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIF 195 (423)
Q Consensus 121 ~-~~~w~~~~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~~~~~~~~~~d~~i 195 (423)
+ ...+||. ++||++||||+ ||+++++|.|+++|++.+..++.+|.|+|+++|| |+.|++.+++++.. ..|+++
T Consensus 91 ~~~~~~p~~-~~~g~lyGrG~~D~Kgglaa~l~A~~~l~~~~~~~~~~v~~~~~~dEE~g~~g~~~~~~~~~~-~~d~~i 168 (376)
T PRK07473 91 GTLEKLPWR-REGNKCYGPGILDMKGGNYLALEAIRQLARAGITTPLPITVLFTPDEEVGTPSTRDLIEAEAA-RNKYVL 168 (376)
T ss_pred CCccCCCeE-EECCEEEcCchhhchHHHHHHHHHHHHHHHcCCCCCCCEEEEEeCCcccCCccHHHHHHHhhc-cCCEEE
Confidence 3 2233553 67899999996 9999999999999998887778899999999999 88899999986543 457777
Q ss_pred eeccCCCCCCceEEeecCcccCcceEEEEEEEeCCCCCC-CCCCCCcHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEE
Q 014490 196 GLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAA-IPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKF 274 (423)
Q Consensus 196 ~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~-~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i 274 (423)
+.++ +...+.+. .+++|..+++|+++|+++|++ .|+.|+|||..+++++.+|+++.. ...++|++.|
T Consensus 169 v~ep--~~~~~~v~----~~~~G~~~~~v~~~G~~aHag~~p~~g~nAi~~~~~~i~~l~~~~~------~~~~~~vg~i 236 (376)
T PRK07473 169 VPEP--GRPDNGVV----TGRYAIARFNLEATGRPSHAGATLSEGRSAIREMARQILAIDAMTT------EDCTFSVGIV 236 (376)
T ss_pred EeCC--CCCCCCEE----EECeeeEEEEEEEEeEcCCCCCCcccCcCHHHHHHHHHHHHHHhcC------CCceEeEeeE
Confidence 6442 22222222 345799999999999999987 699999999999999999988742 2368999999
Q ss_pred ecCCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCcccc--C-HHHHHHHHHHHH
Q 014490 275 EGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVN--N-KNLHEHFQKVAA 351 (423)
Q Consensus 275 ~gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--d-~~~~~~l~~~~~ 351 (423)
+||...|+||++|++.++.|....+..+.+.+++.+.++ ...+++++++. ....+++.. + +++++.++++.+
T Consensus 237 ~gg~~~n~VP~~~~~~~d~r~~~~~~~~~~~~~i~~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~ 311 (376)
T PRK07473 237 HGGQWVNCVATTCTGEALSMAKRQADLDRGVARMLALSG---TEDDVTFTVTR--GVTRPVWEPDAGTMALYEKARAIAG 311 (376)
T ss_pred EcCCCCcCCCCceEEEEEEEeCCHhHHHHHHHHHHHhhC---cCCCeEEEEEc--cccCCCCCCChhHHHHHHHHHHHHH
Confidence 999999999999999999998887777766666655544 22345555443 223343322 2 468888877776
Q ss_pred HhcCCcccccCCCCCCCchHHHHHhh-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 352 DMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 352 ~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
.. |.++ .....+|++|+++|... +|++. ++| ||. ..+|++|||++++++.+++++|+.++.
T Consensus 312 ~~-g~~~--~~~~~~g~tDa~~~~~~giP~v~-g~G-----pg~-~~~H~~dE~v~i~~l~~~~~vl~~~l~ 373 (376)
T PRK07473 312 QL-GLSL--PHGSAGGGSDGNFTGAMGIPTLD-GLG-----VRG-ADYHTLNEHIEVDSLAERGRLMAGLLA 373 (376)
T ss_pred Hc-CCCC--ccccCccccHhhhHHhcCCCEEE-ecc-----CCC-CCCCCCCceEecccHHHHHHHHHHHHH
Confidence 65 8765 34567899999999877 99765 456 443 358999999999999999999999875
No 30
>PRK09104 hypothetical protein; Validated
Probab=100.00 E-value=1.3e-48 Score=395.05 Aligned_cols=370 Identities=14% Similarity=0.145 Sum_probs=285.1
Q ss_pred hHHHHhhcCchhHHHHHHHHHHhHhCCCCCCCc------HHHHHHHHHHHHhCCCCeEe--cccCceEEEEECCC--CCc
Q 014490 37 VKFLDFAKKPEIFYWMVNIRRKIHENPELGFQE------FETSKLIRAELDQMGIPYKF--PVAVTGVVGYIGTG--QPP 106 (423)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~E------~~~~~~l~~~l~~~g~~~~~--~~~~~nvia~~~~~--~~~ 106 (423)
.++.++++.++ +++++++++|++|||+|+++ .++++||.++|+++|++++. ...++||+++++++ .+|
T Consensus 6 ~~~~~~~~~~~--~~~~~~L~~lv~i~Svs~~~~~~~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~l~a~~~g~~~~~~ 83 (464)
T PRK09104 6 DPVLDHIDANL--DASLERLFALLRIPSISTDPAYAADCRKAADWLVADLASLGFEASVRDTPGHPMVVAHHEGPTGDAP 83 (464)
T ss_pred HHHHHHHHHhH--HHHHHHHHHHhcCCCCCCCccchHHHHHHHHHHHHHHHHCCCeEEEEecCCCCEEEEEecCCCCCCC
Confidence 46788888887 99999999999999999764 67899999999999999875 34568999999642 359
Q ss_pred EEEEEEecccccCcCCCCCccc----CCCCC-----ccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 014490 107 FVALRADMDALAMEESVEWEHK----SKVPG-----KMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (423)
Q Consensus 107 ~ill~~H~Dtvp~~~~~~w~~~----~~~~g-----~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE 174 (423)
+|+|+||+||||+++.++|.++ .++++ ++||||+ ||+++++|.|+++|++.+..++++|.|+|+++||
T Consensus 84 ~lll~gH~DvVp~~~~~~W~~~Pf~~~~~~~~~~~~~lyGRG~~D~Kg~laa~l~a~~~l~~~~~~~~~~i~~~~~~dEE 163 (464)
T PRK09104 84 HVLFYGHYDVQPVDPLDLWESPPFEPRIKETPDGRKVIVARGASDDKGQLMTFVEACRAWKAVTGSLPVRVTILFEGEEE 163 (464)
T ss_pred EEEEEecccCCCCCCcccCCCCCCcceEecCcCCcceEEEecccCCcHHHHHHHHHHHHHHHhcCCCCCcEEEEEECccc
Confidence 9999999999999887789764 23343 5999998 8999999999999998776788999999999999
Q ss_pred -CcccHHHHHhcCCC-cccceeeeeccCCCCCCceEEeecCcccCcceEEEEEEEe--CCCCCCC-CCCCCcHHHHHHHH
Q 014490 175 -GGGGAKKMLDAGAL-ENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVING--KGGHAAI-PQHTIDPIVAASNV 249 (423)
Q Consensus 175 -g~~Ga~~~~~~~~~-~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G--~~~Hs~~-p~~g~nAi~~~~~~ 249 (423)
|+.|+..++++... ...|++|+.++ +...+.. ....++++|.++|+++++| +++|||. |+.|.|||..++++
T Consensus 164 ~g~~g~~~~l~~~~~~~~~d~~iv~E~--~~~~~~~-~~i~~~~kG~~~~~l~v~g~~~~~Hss~~~~~g~nai~~~~~~ 240 (464)
T PRK09104 164 SGSPSLVPFLEANAEELKADVALVCDT--GMWDRET-PAITTSLRGLVGEEVTITAADRDLHSGLFGGAAANPIRVLTRI 240 (464)
T ss_pred cCCccHHHHHHhhHHhcCCCEEEEeCC--CCCCCCC-eEEEeecCCeEEEEEEEEeCCCCccccccCCccCCHHHHHHHH
Confidence 78899888775321 14577776442 2111100 0123567899999999999 6899995 68899999999999
Q ss_pred HHHHHHhhcccC------------------------------------CC------------CCCceEEEEEEecCC---
Q 014490 250 IVSLQHLVSREA------------------------------------DP------------LDSQVLTVAKFEGGG--- 278 (423)
Q Consensus 250 i~~l~~~~~~~~------------------------------------~~------------~~~~t~~v~~i~gg~--- 278 (423)
+.+|++...+.. .+ ...+++|++.|+||.
T Consensus 241 l~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~gg~~~~ 320 (464)
T PRK09104 241 LAGLHDETGRVTLPGFYDGVEELPPEILAQWKALGFTAEAFLGPVGLSIPAGEKGRSVLEQIWSRPTCEINGIWGGYTGE 320 (464)
T ss_pred HHhccCCCCCEeCCccccCCCCCCHHHHHHHHhCCCCHHHHHHhcCCccccCcccHHHHHHHhhCCeEEEeccccCCCCC
Confidence 999976321100 00 113689999999884
Q ss_pred -CCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCc--cccCHHHHHHHHHHHHHhcC
Q 014490 279 -AFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPV--TVNNKNLHEHFQKVAADMLG 355 (423)
Q Consensus 279 -~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~~~~~l~~~~~~~~g 355 (423)
..|+||++|++++|+|++|+++++++.+.|++++.+.. ..+.++++.. ....++ ++.++++++.+.+++++.+|
T Consensus 321 ~~~nvvP~~~~~~~diR~~p~~~~~~v~~~i~~~l~~~~-~~~~~v~~~~--~~~~~~~~~~~~~~~v~~l~~~~~~~~~ 397 (464)
T PRK09104 321 GFKTVIPAEASAKVSFRLVGGQDPAKIREAFRAYVRARL-PADCSVEFHD--HGGSPAIALPYDSPALAAAKAALSDEWG 397 (464)
T ss_pred CCccEecCceEEEEEEEeCCCCCHHHHHHHHHHHHHHhC-CCCeEEEEEe--cCCCCceECCCCCHHHHHHHHHHHHHhC
Confidence 46999999999999999999999999999999987531 1234444433 223343 46678999999999999888
Q ss_pred CcccccCCCCCCCc-hHHHHHhh--cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 356 VQNIKENRPLMGTE-DFSFFAEA--IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 356 ~~~~~~~~~~~g~t-D~~~~~~~--ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
.++.. ...+|++ |++.|... +|++++++|... ..+|++||||++++|.+++++|+.++.
T Consensus 398 ~~~~~--~~~~g~~~~~~~~~~~~gip~v~~g~G~~~------~~aH~~nE~i~i~~l~~~~~~~~~ll~ 459 (464)
T PRK09104 398 KPAVL--IGSGGSIPIVGDFKRILGMDSLLVGFGLDD------DRIHSPNEKYDLESFHKGIRSWARILA 459 (464)
T ss_pred CCcee--cCCCCcHHHHHHHHHHhCCCEEEecCCCCC------CCCcCCCCCcCHHHHHHHHHHHHHHHH
Confidence 76532 3445554 46676653 888777665322 469999999999999999999999875
No 31
>PRK07907 hypothetical protein; Provisional
Probab=100.00 E-value=1.4e-48 Score=393.06 Aligned_cols=366 Identities=16% Similarity=0.161 Sum_probs=282.0
Q ss_pred hHHHHhhcCchhHHHHHHHHHHhHhCCCCCCC------cHHHHHHHHHHHHhCCC-CeEec--ccCceEEEEECCC-CCc
Q 014490 37 VKFLDFAKKPEIFYWMVNIRRKIHENPELGFQ------EFETSKLIRAELDQMGI-PYKFP--VAVTGVVGYIGTG-QPP 106 (423)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~------E~~~~~~l~~~l~~~g~-~~~~~--~~~~nvia~~~~~-~~~ 106 (423)
+++.++++++. +++++++++|++|||+|++ |.++++||.++|+++|| +++.. +.++|++++++++ .+|
T Consensus 7 ~~~~~~i~~~~--~~~~~ll~~LV~ipS~s~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~nl~a~~~~~~~~~ 84 (449)
T PRK07907 7 DDLRARVAELL--PRVRADLEELVRIPSVAADPFRREEVARSAEWVADLLREAGFDDVRVVSADGAPAVIGTRPAPPGAP 84 (449)
T ss_pred HHHHHHHHHHH--HHHHHHHHHHhcCCCCCCCccchhhHHHHHHHHHHHHHHcCCceEEEEecCCCCEEEEEecCCCCCC
Confidence 36778888877 9999999999999999963 57899999999999998 66652 4678999999654 358
Q ss_pred EEEEEEecccccCcCCCCCccc----CCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Cccc
Q 014490 107 FVALRADMDALAMEESVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGG 178 (423)
Q Consensus 107 ~ill~~H~Dtvp~~~~~~w~~~----~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G 178 (423)
+|+|+||+||||+++..+|.++ .++||+|||||+ ||+++++|.|+++| +..++++|.|+++++|| |+.|
T Consensus 85 ~lll~gH~DvVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l---~~~~~~~i~~~~~~dEE~g~~g 161 (449)
T PRK07907 85 TVLLYAHHDVQPPGDPDAWDSPPFELTERDGRLYGRGAADDKGGIAMHLAALRAL---GGDLPVGVTVFVEGEEEMGSPS 161 (449)
T ss_pred EEEEEcccCCCCCCCccccCCCCceeEEECCEEEECCccCCcHHHHHHHHHHHHh---ccCCCCcEEEEEEcCcccCCcc
Confidence 9999999999999887789754 456899999998 89999999999999 33577899999999999 8899
Q ss_pred HHHHHhcCC-CcccceeeeeccCCCCCCceEEeecCcccCcceEEEEEEE--eCCCCCCC-CCCCCcHHHHHHHHHHHHH
Q 014490 179 AKKMLDAGA-LENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVIN--GKGGHAAI-PQHTIDPIVAASNVIVSLQ 254 (423)
Q Consensus 179 a~~~~~~~~-~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~--G~~~Hs~~-p~~g~nAi~~~~~~i~~l~ 254 (423)
+++++++.. ..+.|++++.++... ..+.-. ..++++|..+++++++ |+++|||. +..+.|||..+++++.+|+
T Consensus 162 ~~~~l~~~~~~~~~d~~iv~E~~~~-~~~~p~--i~~~~kG~~~~~l~v~~~G~~~Hss~~~~~~~nAi~~~~~~l~~l~ 238 (449)
T PRK07907 162 LERLLAEHPDLLAADVIVIADSGNW-SVGVPA--LTTSLRGNADVVVTVRTLEHAVHSGQFGGAAPDALTALVRLLATLH 238 (449)
T ss_pred HHHHHHhchHhhcCCEEEEecCCcC-CCCCeE--EEEecCCcEEEEEEEEECCCCCCCccccccCCCHHHHHHHHHHhhC
Confidence 999987632 123577776543111 011001 1345789999999998 89999997 4668999999999999997
Q ss_pred HhhcccC-------CC---------------------------------CCCceEEEEEEec---CCCCccCCCcEEEEE
Q 014490 255 HLVSREA-------DP---------------------------------LDSQVLTVAKFEG---GGAFNIIPDSVTIGG 291 (423)
Q Consensus 255 ~~~~~~~-------~~---------------------------------~~~~t~~v~~i~g---g~~~n~iP~~a~~~~ 291 (423)
+...+.. .+ ...++++++.|++ |...|+||++|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~~~~~g~~~nvIP~~a~~~~ 318 (449)
T PRK07907 239 DEDGNVAVDGLDATEPWLGVDYDEERFRADAGVLDGVELIGTGSVADRLWAKPAITVIGIDAPPVAGASNALPPSARARL 318 (449)
T ss_pred CCCCCEeCCCccCCCCcccccccHHHHHHHhhhhhcccccCCChHHHHhhhcCcEEEEeeecCCCCCCCCEecCceEEEE
Confidence 6431100 00 1246899999986 467899999999999
Q ss_pred EEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCcc--ccCHHHHHHHHHHHHHhcCCcccccCCCCCCCc
Q 014490 292 TFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVT--VNNKNLHEHFQKVAADMLGVQNIKENRPLMGTE 369 (423)
Q Consensus 292 d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~t 369 (423)
|+|+.|+++.+++.+.|++++++. ..++.+++++. ...++|+ +.++++++.+++++++.+|.++. ....+|++
T Consensus 319 diR~~p~~~~e~v~~~l~~~l~~~-~~~~~~~~~~~--~~~~~p~~~~~~~~~~~~l~~a~~~~~g~~~~--~~~~~g~~ 393 (449)
T PRK07907 319 SLRVAPGQDAAEAQDALVAHLEAH-APWGAHVTVER--GDAGQPFAADASGPAYDAARAAMREAWGKDPV--DMGMGGSI 393 (449)
T ss_pred EEEcCCCCCHHHHHHHHHHHHHhc-CCCCcEEEEEE--CCCcCceeCCCCCHHHHHHHHHHHHHhCCCce--ecCCCCcH
Confidence 999999999999999999998764 22355666655 3334443 45789999999999999888663 23455555
Q ss_pred hH-HHHHhh---cCeEEEEeccCCCCCCCC-CCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 370 DF-SFFAEA---IPGYFYYLGMNDETKGKF-ETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 370 D~-~~~~~~---ip~~~~~~g~~~~~pg~~-~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
+. +.|.+. +|++. +| ||+. .++|++||++++++|.+++++|+.+++
T Consensus 394 ~~~~~~~~~~~~~~~v~--~G-----pg~~~~~aH~~nE~i~i~~l~~~~~~~~~~l~ 444 (449)
T PRK07907 394 PFIAELQEAFPQAEILV--TG-----VEDPKTRAHSPNESVHLGELERAAVAEALLLA 444 (449)
T ss_pred HHHHHHHHhcCCCcEEE--ec-----cCCCCCCCcCCCCCcCHHHHHHHHHHHHHHHH
Confidence 42 445443 34444 45 4443 469999999999999999999999986
No 32
>PRK00466 acetyl-lysine deacetylase; Validated
Probab=100.00 E-value=9.2e-49 Score=381.87 Aligned_cols=325 Identities=13% Similarity=0.099 Sum_probs=262.9
Q ss_pred HHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEecccCceEEEEECCCCCcEEEEEEecccccCcCCCCCcccC
Q 014490 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWEHKS 129 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~~~~~~ill~~H~Dtvp~~~~~~w~~~~ 129 (423)
+++++++++|++|||++++|.++++||.++|+++|++++... ..|++. . + +|+|+|+||+||||. |....
T Consensus 10 ~~~~~~l~~lv~i~s~s~~e~~~~~~l~~~l~~~g~~~~~~~-~~~~~~--~-g-~~~lll~gH~DtVp~-----~~~~~ 79 (346)
T PRK00466 10 QKAKELLLDLLSIYTPSGNETNATKFFEKISNELNLKLEILP-DSNSFI--L-G-EGDILLASHVDTVPG-----YIEPK 79 (346)
T ss_pred HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCeEEEec-CCCcEe--c-C-CCeEEEEeccccCCC-----CCCce
Confidence 678899999999999999999999999999999999887643 456653 2 2 378999999999994 22235
Q ss_pred CCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHhcCCCcccceeeeeccCCCCCC
Q 014490 130 KVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLFPV 205 (423)
Q Consensus 130 ~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~~~~~~~~~~d~~i~~~~~~~~p~ 205 (423)
++||+|||||+ ||+++++|.|+++|++.+ .++.|+|++||| |+.|++++++++. ..|++++ ++|+
T Consensus 80 ~~~g~iyGrG~~DmKgg~aa~l~a~~~l~~~~----~~i~~~~~~dEE~g~~G~~~l~~~~~--~~d~~i~-----~ep~ 148 (346)
T PRK00466 80 IEGEVIYGRGAVDAKGPLISMIIAAWLLNEKG----IKVMVSGLADEESTSIGAKELVSKGF--NFKHIIV-----GEPS 148 (346)
T ss_pred eeCCEEEecCccccchHHHHHHHHHHHHHHcC----CCEEEEEEcCcccCCccHHHHHhcCC--CCCEEEE-----cCCC
Confidence 67899999998 899999999999998765 358999999999 7789999998763 4677665 3455
Q ss_pred ceEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEecCCCCccCCC
Q 014490 206 GTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPD 285 (423)
Q Consensus 206 g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gg~~~n~iP~ 285 (423)
+... ..++++|..+++|+++|+++|+|.|+ .|||..|++++.+|.++.. .....+++++.|+||...|+||+
T Consensus 149 ~~~~--i~~~~kG~~~~~i~v~G~~~Has~p~--~nAi~~~~~~l~~l~~~~~----~~~~~t~~~~~i~gG~~~NvvP~ 220 (346)
T PRK00466 149 NGTD--IVVEYRGSIQLDIMCEGTPEHSSSAK--SNLIVDISKKIIEVYKQPE----NYDKPSIVPTIIRAGESYNVTPA 220 (346)
T ss_pred CCCc--eEEEeeEEEEEEEEEEeeccccCCCC--cCHHHHHHHHHHHHHhccc----cCCCCcceeeEEecCCcCcccCC
Confidence 4311 12446899999999999999999886 5999999999999977532 22346899999999999999999
Q ss_pred cEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCc--cccCHHHHHHHHHHHHHhcCCcccccCC
Q 014490 286 SVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPV--TVNNKNLHEHFQKVAADMLGVQNIKENR 363 (423)
Q Consensus 286 ~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~~~~~l~~~~~~~~g~~~~~~~~ 363 (423)
+|++.+|+|+.|+++.+++.++|++.+++ +++++. ..+++ ++.++++++.+.+++++. |.++ .+.
T Consensus 221 ~a~~~~diR~~p~~~~~~v~~~i~~~~~~------~~~~~~----~~~~~~~~~~~~~lv~~l~~a~~~~-g~~~--~~~ 287 (346)
T PRK00466 221 KLYLHFDVRYAINNKRDDLISEIKDKFQE------CGLKIV----DETPPVKVSINNPVVKALMRALLKQ-NIKP--RLV 287 (346)
T ss_pred ceEEEEEEEeCCCCCHHHHHHHHHHHHhh------CcEeec----cCCCCcccCCCCHHHHHHHHHHHHh-CCCc--eEE
Confidence 99999999999999999999999988864 233322 23333 345689999999999986 8765 334
Q ss_pred CCCCCchHHHHHhhcCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 364 PLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 364 ~~~g~tD~~~~~~~ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
..+|++|+++|.+..|.++ .+| ||....+|++|||+++++|.+++++|+.++.
T Consensus 288 ~~~g~tD~~~~~~~~~~~v-~fG-----pg~~~~aH~~nE~i~i~~l~~~~~~~~~~i~ 340 (346)
T PRK00466 288 RKAGTSDMNILQKITTSIA-TYG-----PGNSMLEHTNQEKITLDEIYIAVKTYMLAIE 340 (346)
T ss_pred ecCCcCcHHHHHHhCCCEE-EEC-----CCCcccccCCCceeeHHHHHHHHHHHHHHHH
Confidence 6788999999988744332 356 5556679999999999999999999999875
No 33
>PRK04443 acetyl-lysine deacetylase; Provisional
Probab=100.00 E-value=2.1e-48 Score=379.51 Aligned_cols=330 Identities=16% Similarity=0.159 Sum_probs=264.5
Q ss_pred HHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEecccCceEEEEECCCCCcEEEEEEecccccCcCCCCCcccC
Q 014490 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWEHKS 129 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~~~~~~ill~~H~Dtvp~~~~~~w~~~~ 129 (423)
+++++++++|++|||++++|.++++||.++|+++|++++.+ ...|++++++++ +|+|+|+||+||||... |+ .
T Consensus 6 ~~~~~~l~~Lv~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~-~~~n~i~~~~~~-~~~l~~~~H~DtVp~~~----p~-~ 78 (348)
T PRK04443 6 LEARELLKGLVEIPSPSGEEAAAAEFLVEFMESHGREAWVD-EAGNARGPAGDG-PPLVLLLGHIDTVPGDI----PV-R 78 (348)
T ss_pred HHHHHHHHHHHcCCCCCCChHHHHHHHHHHHHHcCCEEEEc-CCCcEEEEcCCC-CCEEEEEeeccccCCCC----Cc-E
Confidence 67999999999999999999999999999999999998764 346999998543 49999999999999532 33 3
Q ss_pred CCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHhcCCCcccceeeeeccCCCCCC
Q 014490 130 KVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLFPV 205 (423)
Q Consensus 130 ~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~~~~~~~~~~d~~i~~~~~~~~p~ 205 (423)
++||++||||+ ||+++++|.|+++| +.+++++|.|+++++|| |+.|...++.++. ..|++++. +|+
T Consensus 79 ~~~g~iyGrG~~D~Kg~~aa~l~A~~~l---~~~~~~~i~~~~~~dEE~g~~~~~~~l~~~~--~~d~~iv~-----Ept 148 (348)
T PRK04443 79 VEDGVLWGRGSVDAKGPLAAFAAAAARL---EALVRARVSFVGAVEEEAPSSGGARLVADRE--RPDAVIIG-----EPS 148 (348)
T ss_pred eeCCeEEeecccccccHHHHHHHHHHHh---cccCCCCEEEEEEcccccCChhHHHHHHhcc--CCCEEEEe-----CCC
Confidence 56899999997 89999999999999 34688999999999999 6666666666654 46777764 344
Q ss_pred ceEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhc---ccCCCCCCceEEEEEEecCCCCcc
Q 014490 206 GTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVS---READPLDSQVLTVAKFEGGGAFNI 282 (423)
Q Consensus 206 g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~---~~~~~~~~~t~~v~~i~gg~~~n~ 282 (423)
+.- ...++++|..+++++++|+++|||.| |.|||..|++++..|+.+.. .........++|++.|+ ...|+
T Consensus 149 ~~~--~i~~~~kG~~~~~l~~~G~~~Hss~~--g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~i~~i~--~~~n~ 222 (348)
T PRK04443 149 GWD--GITLGYKGRLLVTYVATSESFHSAGP--EPNAAEDAIEWWLAVEAWFEANDGRERVFDQVTPKLVDFD--SSSDG 222 (348)
T ss_pred Ccc--ceeeecccEEEEEEEEEeCCCccCCC--CCCHHHHHHHHHHHHHHHHhcCccccccccccceeeeEEe--cCCCC
Confidence 421 12345689999999999999999987 79999999999999988653 11112345788999988 35799
Q ss_pred CCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCcc--ccCHHHHHHHHHHHHHhcCCcccc
Q 014490 283 IPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVT--VNNKNLHEHFQKVAADMLGVQNIK 360 (423)
Q Consensus 283 iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~~~~~~l~~~~~~~~g~~~~~ 360 (423)
||++|++.+|+|++|+++.+++.++|++++. +.++++. ..++++ +.++++++.+++++++.++ ++
T Consensus 223 iP~~~~~~~d~R~~p~~~~~~i~~~i~~~~~------~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~-- 289 (348)
T PRK04443 223 LTVEAEMTVGLRLPPGLSPEEAREILDALLP------TGTVTFT----GAVPAYMVSKRTPLARAFRVAIREAGG-TP-- 289 (348)
T ss_pred CCceEEEEEEEccCCCCCHHHHHHHHHHhCC------CcEEEEe----cCCCceecCCCCHHHHHHHHHHHHhcC-Cc--
Confidence 9999999999999999999999999988873 3333332 233443 4568899999999999855 33
Q ss_pred cCCCCCCCchHHHHHhh--cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 361 ENRPLMGTEDFSFFAEA--IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 361 ~~~~~~g~tD~~~~~~~--ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
.....+|++|+++|.+. +|++.+ | ||+...+|++|||+++++|.+++++|+.++.
T Consensus 290 ~~~~~~g~tD~~~~~~~~gip~v~~--G-----pg~~~~~H~~dE~i~i~~l~~~~~~~~~~~~ 346 (348)
T PRK04443 290 RLKRKTGTSDMNVVAPAWGCPMVAY--G-----PGDSDLDHTPDEHLPLAEYLRAIAVLTDVLE 346 (348)
T ss_pred ceeccccCCcHHHHhhhcCCCEEEE--C-----CCCccccCCCcccccHHHHHHHHHHHHHHHh
Confidence 23456799999999763 887655 5 4555678999999999999999999999885
No 34
>TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase. This enzyme is involved in the biosynthesis of lysine, and is related to the enzyme acetylornithine deacetylase and other amidases and peptidases found within pfam01546.
Probab=100.00 E-value=3.3e-48 Score=381.00 Aligned_cols=331 Identities=19% Similarity=0.188 Sum_probs=254.0
Q ss_pred HHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCC-eEecccCceEEEEECCCCCcEEEEEEecccccCcC--CCCCcc----
Q 014490 55 IRRKIHENPELGFQEFETSKLIRAELDQMGIP-YKFPVAVTGVVGYIGTGQPPFVALRADMDALAMEE--SVEWEH---- 127 (423)
Q Consensus 55 ~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~-~~~~~~~~nvia~~~~~~~~~ill~~H~Dtvp~~~--~~~w~~---- 127 (423)
++++|++|||++++|.++++||.++|+++|++ ++....+.||+++++++++|+|+|+|||||||+++ ...|.+
T Consensus 1 ll~~Lv~ipS~s~~e~~~~~~i~~~l~~~g~~~~~~~~~~~nvva~~~~~~~~~l~l~gH~DtVp~~~~~~~~W~~~p~~ 80 (373)
T TIGR01900 1 LLQQIMDIFSPSDHEGPIADEIEAALNNLELEGLEVFRFGDNVLARTDFGKASRVILAGHIDTVPIADNFPPKWLEPGDS 80 (373)
T ss_pred ChHHHhCCCCCCchHHHHHHHHHHHHhhccccCceEEEECCEEEEecCCCCCCeEEEeCccccccCCCCChhhhccCccc
Confidence 46789999999999999999999999999654 22222355999998654468999999999999875 245853
Q ss_pred --------cCCCCCccccCCc---hHHHHHHHHHHHHHHh--ccccCCceEEEEEecCCC-Cc--ccHHHHHhcCC-Ccc
Q 014490 128 --------KSKVPGKMHACGH---DAHVAMLLGAAKMLQV--FRHEIKGTIVLVFQPAEE-GG--GGAKKMLDAGA-LEN 190 (423)
Q Consensus 128 --------~~~~~g~~~grG~---k~~~a~~l~a~~~l~~--~~~~~~~~i~~~~~~~EE-g~--~Ga~~~~~~~~-~~~ 190 (423)
..++||++||||+ |++++++|.|+++|++ .+..++++|.|+|+++|| ++ .|++.+++... +..
T Consensus 81 ~~~~~~~~~~~~~g~lyGRGa~DmKgg~aa~l~a~~~l~~~~~~~~~~~~i~~~~~~dEE~~~~~~G~~~~~~~~~~~~~ 160 (373)
T TIGR01900 81 LIREEIAHAHPEDGILWGCGATDMKAGDAVMLHLAATLDGRAPETELKHDLTLIAYDCEEVAAEKNGLGHIRDAHPDWLA 160 (373)
T ss_pred ccccccccccccCCEEEecCchhhhHHHHHHHHHHHHHhhhccccCCCCCEEEEEEecccccCCCCCHHHHHHhCccccc
Confidence 2467899999998 8999999999999954 345678999999999999 43 59999987642 224
Q ss_pred cceeeeeccCCCCCCceEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhcccC--CC-CCCc
Q 014490 191 VEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREA--DP-LDSQ 267 (423)
Q Consensus 191 ~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~--~~-~~~~ 267 (423)
.|++++. +|++. ...++++|..+++|+++|+++|+|.|+.|.|||..+++++.+|+++..... +. ....
T Consensus 161 ~d~~iv~-----Ept~~---~i~~g~~G~~~~~i~v~G~~~H~s~p~~g~NAi~~~~~~i~~l~~l~~~~~~~~~~~~~~ 232 (373)
T TIGR01900 161 ADFAIIG-----EPTGG---GIEAGCNGNIRFDVTAHGVAAHSARAWLGDNAIHKAADIINKLAAYEAAEVNIDGLDYRE 232 (373)
T ss_pred CCEEEEE-----CCCCC---cccccceeeEEEEEEEEeeccccCCCCCCCCHHHHHHHHHHHHHHhhcccccccCCcccc
Confidence 6776653 34432 123557899999999999999999999999999999999999988753211 11 1246
Q ss_pred eEEEEEEecCCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHH--------HHHh---cC-CeEEEEeeccCCCCc
Q 014490 268 VLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMK--------QASV---QR-CNATVTFDDKSFYPV 335 (423)
Q Consensus 268 t~~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~--------~~~~---~~-~~~~~~~~~~~~~~~ 335 (423)
++|++.|+||...|+||++|++++|+|+.|+++.+++.+.|+++++. .... .+ ..++++. ....++
T Consensus 233 t~~v~~I~GG~~~nvVP~~a~~~~diR~~p~~~~e~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 310 (373)
T TIGR01900 233 GLNATFCEGGKANNVIPDEARMHLNFRFAPDKDLAEAKALMMGADAGAELGNGEHVAEGGEFDGQDGIEIAM--EDEAGG 310 (373)
T ss_pred eEEEEEEeCCCCCcccCCeEEEEEEEecCCCcCHHHHHHHHHhhhhhhhhhHHHHHHhhccccccccceEEE--cccCCC
Confidence 89999999999999999999999999999999999999999766432 2211 11 1233333 111121
Q ss_pred --cccCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhh-cCeEEEEeccCCCCCCCCCCCCCCCccCC
Q 014490 336 --TVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVN 406 (423)
Q Consensus 336 --~~~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~ 406 (423)
.+.++++++.+.+++++.+|.++. ...|+||+++|... +|++++ | ||+..++|++|||++
T Consensus 311 ~~~~~~~~~~~~~~~a~~~~~~~~~~----~~~g~tD~~~~~~~gip~v~~--G-----pg~~~~aH~~dE~v~ 373 (373)
T TIGR01900 311 ALPGLGAPLAQDLIDAVGEEKGRDPL----AKFGWTDVARFSALGIPALNF--G-----AGDPLFAHKHDEQCP 373 (373)
T ss_pred CCCCCCCHHHHHHHHHHHhccCCCcc----cccCCccHHHHHhcCCCEEEe--C-----CCChhhccCCCCCCC
Confidence 234678899999999998787652 35688999999876 898765 5 666678999999985
No 35
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=4.7e-48 Score=378.16 Aligned_cols=334 Identities=19% Similarity=0.198 Sum_probs=265.5
Q ss_pred HHHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhC-CCCeEecccCceEEEEECCCCCcEEEEEEecccccCcCCCCCcc
Q 014490 49 FYWMVNIRRKIHENPELGFQEFETSKLIRAELDQM-GIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWEH 127 (423)
Q Consensus 49 ~~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~-g~~~~~~~~~~nvia~~~~~~~~~ill~~H~Dtvp~~~~~~w~~ 127 (423)
.+++++++++|++|||+|++|.++++||.++|+++ |+++.. .+.|++++++++.+++|+|+||+||||+++ .+++
T Consensus 6 ~~~~~~~l~~li~ips~s~~e~~~~~~l~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~i~l~~H~Dtvp~~~--~~~~ 81 (352)
T PRK13007 6 AADLAELTAALVDIPSVSGDEKALADAVEAALRALPHLEVIR--HGNSVVARTDLGRPSRVVLAGHLDTVPVAD--NLPS 81 (352)
T ss_pred HHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHhCcCceEEe--cCCeEEEEccCCCCCeEEEEccccccCCCC--CCCc
Confidence 37899999999999999999999999999999996 887764 357999999655557899999999999875 3444
Q ss_pred cCCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Cc--ccHHHHHhcC-CCcccceeeeeccC
Q 014490 128 KSKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG--GGAKKMLDAG-ALENVEAIFGLHVS 200 (423)
Q Consensus 128 ~~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~--~Ga~~~~~~~-~~~~~d~~i~~~~~ 200 (423)
. .+||++||||+ |++++++|.|+++|. +++++|.|+|+++|| ++ .|++.++... .+.++|++++.+
T Consensus 82 ~-~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~----~~~~~i~~~~~~~EE~~~~~~G~~~~~~~~~~~~~~d~~i~~e-- 154 (352)
T PRK13007 82 R-REGDRLYGCGASDMKSGLAVMLHLAATLA----EPAHDLTLVFYDCEEVEAEANGLGRLAREHPEWLAGDFAILLE-- 154 (352)
T ss_pred c-eeCCEEEccCcccccHHHHHHHHHHHHhh----ccCCCeEEEEEecccccCCcccHHHHHHhcccccCCCEEEEec--
Confidence 3 56899999998 899999999999993 378899999999999 44 5889888653 233567877654
Q ss_pred CCCCCceEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhcccCC---CCCCceEEEEEEecC
Q 014490 201 SLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREAD---PLDSQVLTVAKFEGG 277 (423)
Q Consensus 201 ~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~---~~~~~t~~v~~i~gg 277 (423)
|++.. ..++++|..+++|+++|+++|||.|+.|.||+..+++++.+|+.+..+... .....+++++.|+||
T Consensus 155 ---p~~~~---i~~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~i~gG 228 (352)
T PRK13007 155 ---PTDGV---IEAGCQGTLRVTVTFHGRRAHSARSWLGENAIHKAAPVLARLAAYEPREVVVDGLTYREGLNAVRISGG 228 (352)
T ss_pred ---CCCCc---eEeeccceEEEEEEEEecccccCCCccCcCHHHHHHHHHHHHHHhcccccccCCCCccceeEeEeEecC
Confidence 33221 124467999999999999999999999999999999999999887533211 112358999999999
Q ss_pred CCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCccccCHHHHHHHHHHHHHhcCCc
Q 014490 278 GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQ 357 (423)
Q Consensus 278 ~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~g~~ 357 (423)
...|+||++|++.+|+|++|+++.+++.++|++.+.+.+ ++++... ..++. ...++++++.+.+++ |..
T Consensus 229 ~~~nviP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~-----~~~~~~~-~~~~~-~~~~~~~~~~~~~~~----g~~ 297 (352)
T PRK13007 229 VAGNVIPDECVVNVNYRFAPDRSLEEALAHVREVFDGFA-----EVEVTDL-APGAR-PGLDHPAAAALVAAV----GGE 297 (352)
T ss_pred CcCccCCCeEEEEEEEeeCCCCCHHHHHHHHHHHhcccc-----EEEeecc-cCCCC-CCCCCHHHHHHHHHh----CCC
Confidence 999999999999999999999999999999998876432 3443221 22222 234677887777753 543
Q ss_pred ccccCCCCCCCchHHHHHhh-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHH
Q 014490 358 NIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLA 421 (423)
Q Consensus 358 ~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i 421 (423)
+ ....|++|++.|... +|++.+ | ||+...+|++||++++++|.+++++|+.++
T Consensus 298 ~----~~~~g~td~~~~~~~Gip~v~~--G-----pg~~~~~H~~~E~v~i~~l~~~~~~~~~~~ 351 (352)
T PRK13007 298 V----RAKYGWTDVARFSALGIPAVNF--G-----PGDPALAHQRDEHVPVAQITACARILRRWL 351 (352)
T ss_pred C----ccccccchHHHHHhCCCCEEEe--C-----CCchhhccCCCCceEHHHHHHHHHHHHHHh
Confidence 3 245788999999887 997765 5 555668999999999999999999999886
No 36
>TIGR01883 PepT-like peptidase T-like protein. This model represents a clade of enzymes closely related to Peptidase T, an aminotripeptidase found in bacteria. This clade consists of gram positive bacteria of which several additionally contain a Peptidase T gene.
Probab=100.00 E-value=3.4e-48 Score=380.41 Aligned_cols=341 Identities=19% Similarity=0.190 Sum_probs=278.7
Q ss_pred HHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEecc------cCceEEEEECCC-CCcEEEEEEecccccCcCCCC
Q 014490 52 MVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPV------AVTGVVGYIGTG-QPPFVALRADMDALAMEESVE 124 (423)
Q Consensus 52 ~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~~------~~~nvia~~~~~-~~~~ill~~H~Dtvp~~~~~~ 124 (423)
+++++++|++|||++++|.++++||.++|+++|++++... .++|++++++++ ++|+|+|.||+||||.++ .
T Consensus 2 ~~~~~~~l~~i~s~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~l~~H~D~V~~~~--~ 79 (361)
T TIGR01883 2 LKKYFLELIQIDSESGKEKAILTYLKKQITKLGIPVSLDEVPAEVSNDNNLIARLPGTVKFDTIFFCGHMDTVPPGA--G 79 (361)
T ss_pred hHHHHHHHeecCCCCCcHHHHHHHHHHHHHHcCCEEEEeccccccCCCceEEEEEeCCCCCCcEEEEeeccccCCCC--C
Confidence 6788999999999999999999999999999999976632 378999999654 348999999999999864 3
Q ss_pred CcccCCCCCccccCCc-------hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHhcCCCcccceeee
Q 014490 125 WEHKSKVPGKMHACGH-------DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFG 196 (423)
Q Consensus 125 w~~~~~~~g~~~grG~-------k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~~~~~~~~~~d~~i~ 196 (423)
|. ..+++|++||||+ |++++++|.+++.|++.+ .++++|.|+|+++|| |+.|++.+.+.+. ..++.+.
T Consensus 80 ~~-~~~~~~~~~g~G~~~~g~D~k~g~a~~l~~~~~l~~~~-~~~~~v~~~~~~~EE~g~~G~~~~~~~~~--~~~~~~~ 155 (361)
T TIGR01883 80 PE-PVVEDGIFTSLGGTILGADDKAGVAAMLEAMDVLSTEE-TPHGTIEFIFTVKEELGLIGMRLFDESKI--TAAYGYC 155 (361)
T ss_pred CC-ceecCCeEecCCCeEeeccccHHHHHHHHHHHHHHhcC-CCCCCEEEEEEcccccCchhHhHhChhhc--CcceeEE
Confidence 43 3466799999994 599999999999998866 578899999999999 7789998865432 2345554
Q ss_pred eccCCCCCCceEEeecCcccCcceEEEEEEEeCCCCCC-CCCCCCcHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEe
Q 014490 197 LHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAA-IPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFE 275 (423)
Q Consensus 197 ~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~-~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~ 275 (423)
++ ++.+.+.+. .+++|..+++++++|+++|++ .|+.|+||+..+++++..|+... . ....+++++.++
T Consensus 156 ~~--~~~~~~~i~----~~~~g~~~~~i~~~G~~~Ha~~~p~~g~nAi~~~~~~i~~l~~~~---~--~~~~~~~i~~i~ 224 (361)
T TIGR01883 156 LD--APGEVGNIQ----LAAPTQVKVDATIAGKDAHAGLVPEDGISAISVARMAIHAMRLGR---I--DEETTANIGSFS 224 (361)
T ss_pred Ee--CCCCcceEE----ecCCceEEEEEEEEeeecCCCCCcccCcCHHHHHHHHHHhccccC---C--CCccccccceee
Confidence 33 222334443 235799999999999999986 79999999999999999986531 1 123678999999
Q ss_pred cCCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCcc--ccCHHHHHHHHHHHHHh
Q 014490 276 GGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVT--VNNKNLHEHFQKVAADM 353 (423)
Q Consensus 276 gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~~~~~~l~~~~~~~ 353 (423)
||...|+||++|++.+|+|..|..+.+.+.+++++.+++.+..++.+++++. ...++++ +.|+++++.+++++++.
T Consensus 225 gG~~~nvVP~~~~~~~diR~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~lv~~l~~a~~~~ 302 (361)
T TIGR01883 225 GGVNTNIVQDEQLIVAEARSLSFRKAEAQVQTMRERFEQAAEKYGATLEEET--RLIYEGFKIHPQHPLMNIFKKAAKKI 302 (361)
T ss_pred cCCccCccCCceEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEE--EeccccccCCCCCHHHHHHHHHHHHc
Confidence 9999999999999999999999999999999999999988877788777765 3344554 45678999999999885
Q ss_pred cCCcccccCCCCCCCchHHHHHhh-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 354 LGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 354 ~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
|.++. ....+|++|+++|.+. +|++++|+| . ..+|++||+++++++.+++++|..+++
T Consensus 303 -g~~~~--~~~~~g~tD~~~~~~~giP~v~~G~g-------~-~~~Hs~~E~v~i~~~~~~~~~~~~~~~ 361 (361)
T TIGR01883 303 -GLKTS--EIFSGGGSDANVLNEKGVPTVNLSAG-------Y-VHAHTEKETISIEQLVKLAELVIALAE 361 (361)
T ss_pred -CCCcE--EEecCcccHHHHHhhCCCceEEECCC-------c-ccCcCcceeEEHHHHHHHHHHHHHHhC
Confidence 87653 3467899999999977 998876543 3 369999999999999999999999874
No 37
>PRK08737 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=8.8e-48 Score=376.06 Aligned_cols=335 Identities=16% Similarity=0.149 Sum_probs=257.9
Q ss_pred HHHHHHHHHhHhCCCCC----CCcHHHHHHHHHHHHhCCCCeEec---ccCceEEEEECCCCCcEEEEEEecccccCcCC
Q 014490 50 YWMVNIRRKIHENPELG----FQEFETSKLIRAELDQMGIPYKFP---VAVTGVVGYIGTGQPPFVALRADMDALAMEES 122 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s----~~E~~~~~~l~~~l~~~g~~~~~~---~~~~nvia~~~~~~~~~ill~~H~Dtvp~~~~ 122 (423)
+++++++++|++|||.+ ++|.++++||.++|+ |++++.. ..++|+++..+ +|+|+|+||+||||.++
T Consensus 6 ~~~~~~l~~Lv~i~s~~~~~~~~e~~~~~~l~~~l~--g~~~~~~~~~~~~~nli~~~g---~~~lll~gH~DtVp~~~- 79 (364)
T PRK08737 6 ESTLDHLQALVSFDTRNPPRAITTGGIFDYLRAQLP--GFQVEVIDHGAGAVSLYAVRG---TPKYLFNVHLDTVPDSP- 79 (364)
T ss_pred HHHHHHHHHHhCCCCcCCCCCCCcHHHHHHHHHHhC--CCEEEEecCCCCceEEEEEcC---CCeEEEEeeeCCCCCCC-
Confidence 67899999999999995 357899999999997 8887653 34579998642 37899999999999864
Q ss_pred CCCccc----CCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Cc-ccHHHHHhcCCCcccce
Q 014490 123 VEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG-GGAKKMLDAGALENVEA 193 (423)
Q Consensus 123 ~~w~~~----~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~-~Ga~~~~~~~~~~~~d~ 193 (423)
.|.++ .++||+|||||+ ||+++++|.|++. ++++|.|+|++||| |+ .|++.+++.+. +.|+
T Consensus 80 -~w~~~Pf~~~~~~g~lyGrGa~DmKg~~aa~l~a~~~-------~~~~v~~~~~~dEE~g~~~g~~~~~~~~~--~~~~ 149 (364)
T PRK08737 80 -HWSADPHVMRRTDDRVIGLGVCDIKGAAAALLAAANA-------GDGDAAFLFSSDEEANDPRCVAAFLARGI--PYEA 149 (364)
T ss_pred -CCCCCCCceEEECCEEEEECcccchHHHHHHHHHHHc-------cCCCEEEEEEcccccCchhhHHHHHHhCC--CCCE
Confidence 68644 467899999998 8999999999863 35689999999999 66 68899988764 4577
Q ss_pred eeeeccCCCCCCceEEeecCcccCcceEEEEEEEeCCCCCCCC-CCCCcHHHHHHHHHHHHHHhhccc----CCCCCCce
Q 014490 194 IFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIP-QHTIDPIVAASNVIVSLQHLVSRE----ADPLDSQV 268 (423)
Q Consensus 194 ~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p-~~g~nAi~~~~~~i~~l~~~~~~~----~~~~~~~t 268 (423)
+++ ++|++.. ...+++|..+++|+++|+++|+|.| +.|+|||..+++++.++.+..... .+.....+
T Consensus 150 ~iv-----~Ept~~~---~~~~~kG~~~~~v~v~Gk~aHas~p~~~G~NAI~~~~~~l~~~~~~~~~~~~~~~~~~~~~t 221 (364)
T PRK08737 150 VLV-----AEPTMSE---AVLAHRGISSVLMRFAGRAGHASGKQDPSASALHQAMRWGGQALDHVESLAHARFGGLTGLR 221 (364)
T ss_pred EEE-----cCCCCce---eEEecceeEEEEEEEEeeccccCCCcccCCCHHHHHHHHHHHHHHHHHhhhhhccCCCCCCc
Confidence 765 3565532 2356789999999999999999988 589999999999998876543211 12233569
Q ss_pred EEEEEEecCCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCccccC-HHHHHHHH
Q 014490 269 LTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNN-KNLHEHFQ 347 (423)
Q Consensus 269 ~~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~l~ 347 (423)
+|++.|+||...|+||++|++++|+|+.|+++.+++.++|+++++.. ..+++.... ...++++..+ +++++.+.
T Consensus 222 ~~vg~i~GG~~~NvVP~~a~~~~d~R~~p~~~~e~v~~~i~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 296 (364)
T PRK08737 222 FNIGRVEGGIKANMIAPAAELRFGFRPLPSMDVDGLLATFAGFAEPA----AATFEETFR-GPSLPSGDIARAEERRLAA 296 (364)
T ss_pred eEEeeEecCCCCCcCCCceEEEEEeeeCCCCCHHHHHHHHHHHHHHc----CCceEEEec-cCCCCCcccCcchHHHHHH
Confidence 99999999999999999999999999999999999999997776641 233443331 2344444322 34555443
Q ss_pred HHHHHhcCCcccccCCCCCCCchHHHHHhh-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHhC
Q 014490 348 KVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATS 423 (423)
Q Consensus 348 ~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~~ 423 (423)
+...+..|.+. ....+++||+++|... +|++++ | ||+..++|++||||++++|.+++++|..++.+
T Consensus 297 ~~~~~~~~~~~---~~~~~~~tDa~~~~~~Gip~v~~--G-----pG~~~~aHt~dE~i~i~~l~~~~~~~~~~~~~ 363 (364)
T PRK08737 297 RDVADALDLPI---GNAVDFWTEASLFSAAGYTALVY--G-----PGDIAQAHTADEFVTLDQLQRYAESVHRIIND 363 (364)
T ss_pred HHHHhhhcCCC---CceeccccCHHHHHHcCCCEEEE--C-----CCChhhccCCCcceeHHHHHHHHHHHHHHhcC
Confidence 33333336543 2245678999999877 998776 4 55566799999999999999999999998753
No 38
>PRK07906 hypothetical protein; Provisional
Probab=100.00 E-value=5.5e-48 Score=386.75 Aligned_cols=352 Identities=16% Similarity=0.171 Sum_probs=265.5
Q ss_pred HHHHHHhHhCCCCC------CCcHHHHHHHHHHHHhCCCCeEec---ccCceEEEEECCC-C-CcEEEEEEecccccCcC
Q 014490 53 VNIRRKIHENPELG------FQEFETSKLIRAELDQMGIPYKFP---VAVTGVVGYIGTG-Q-PPFVALRADMDALAMEE 121 (423)
Q Consensus 53 ~~~~~~l~~ips~s------~~E~~~~~~l~~~l~~~g~~~~~~---~~~~nvia~~~~~-~-~~~ill~~H~Dtvp~~~ 121 (423)
++++++|++|||++ ++|.++++||.++|+++|++++.. ..++|+++++++. + .|+|+|++|+||||.++
T Consensus 2 ~~ll~~Lv~i~S~s~~~~~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nv~~~~~g~~~~~~~lll~~H~DtVp~~~ 81 (426)
T PRK07906 2 VDLCSELIRIDTTNTGDGTGKGEREAAEYVAEKLAEVGLEPTYLESAPGRANVVARLPGADPSRPALLVHGHLDVVPAEA 81 (426)
T ss_pred hHHHHHHhcccccCCCCCCCchHHHHHHHHHHHHHhCCCCeEEeecCCCceEEEEEEeCCCCCCCcEEEEcccccCCCCc
Confidence 57899999999999 678999999999999999998763 2578999999543 3 48999999999999865
Q ss_pred CCCCccc----CCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Cc-ccHHHHHhcC--CCcc
Q 014490 122 SVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG-GGAKKMLDAG--ALEN 190 (423)
Q Consensus 122 ~~~w~~~----~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~-~Ga~~~~~~~--~~~~ 190 (423)
.+|.++ .++||++||||+ |++++++|+|+++|++.+..++++|.|+|+++|| ++ .|++.+++.. .+..
T Consensus 82 -~~W~~~Pf~~~~~dg~iyGrG~~D~Kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~~g~~~l~~~~~~~~~~ 160 (426)
T PRK07906 82 -ADWSVHPFSGEIRDGYVWGRGAVDMKDMDAMMLAVVRHLARTGRRPPRDLVFAFVADEEAGGTYGAHWLVDNHPELFEG 160 (426)
T ss_pred -ccCccCCCCceeeCCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEEEEEecCcccchhhhHHHHHHHHHHhccc
Confidence 479654 467899999997 8999999999999999888889999999999999 54 5999998753 2223
Q ss_pred cceeeeeccCC---CCCCceEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhccc-------
Q 014490 191 VEAIFGLHVSS---LFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSRE------- 260 (423)
Q Consensus 191 ~d~~i~~~~~~---~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~------- 260 (423)
.++++. ++.. ..+.+........+++|..+++|+++|+++|+|.|+. .|||..++++|.+|+++..+.
T Consensus 161 ~~~ii~-e~~~~~~~~~~~~~~~~i~~~~kG~~~~~v~v~G~~~Hss~p~~-~nAi~~~~~~l~~l~~~~~~~~~~~~~~ 238 (426)
T PRK07906 161 VTEAIS-EVGGFSLTVPGRDRLYLIETAEKGLAWMRLTARGRAGHGSMVND-DNAVTRLAEAVARIGRHRWPLVLTPTVR 238 (426)
T ss_pred hheEEE-CCCceeeccCCCccEEEEEeccceEEEEEEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHhCCCCcccCHHHH
Confidence 333432 1100 0011101112345678999999999999999999864 999999999999997542110
Q ss_pred -------------CCCC-------------------CCceEEEEEEecCCCCccCCCcEEEEEEEecCChhhHHHHHHHH
Q 014490 261 -------------ADPL-------------------DSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRI 308 (423)
Q Consensus 261 -------------~~~~-------------------~~~t~~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i 308 (423)
.++. ..+++|++.|+||...|+||++|++.+|+|+.|+++ +++.+.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~i~gG~~~NviP~~~~~~~d~R~~p~~~-~~i~~~i 317 (426)
T PRK07906 239 AFLDGVAELTGLEFDPDDPDALLAKLGPAARMVGATLRNTANPTMLKAGYKVNVIPGTAEAVVDGRFLPGRE-EEFLATV 317 (426)
T ss_pred HHHHHhhhhcCcccCcccHHHHHHHHhhcCcchhhhhcccccceeEeccCccccCCCceEEEEEEeECCCCc-HHHHHHH
Confidence 0000 146999999999999999999999999999999886 5566666
Q ss_pred HHHHHHHHHhcCCeEEEEeeccCCCCc--cccCHHHHHHHHHHHHHhcCC-cccccCCCCCCCchHHHHHhh-cCeEEEE
Q 014490 309 EEVVMKQASVQRCNATVTFDDKSFYPV--TVNNKNLHEHFQKVAADMLGV-QNIKENRPLMGTEDFSFFAEA-IPGYFYY 384 (423)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~~~~~l~~~~~~~~g~-~~~~~~~~~~g~tD~~~~~~~-ip~~~~~ 384 (423)
++++. ..+++++. ..+++ .+.++++++.+++++++.++. .+ .+....|+||+++|... +|++.++
T Consensus 318 ~~~~~-------~~v~~~~~--~~~~~~~~~~~~~~v~~l~~a~~~~~~~~~~--~~~~~~ggtDa~~~~~~g~p~~~~g 386 (426)
T PRK07906 318 DELLG-------PDVEREWV--HRDPALETPFDGPLVDAMNAALLAEDPGARV--VPYMLSGGTDAKAFSRLGIRCYGFA 386 (426)
T ss_pred HHHhC-------CCeEEEEe--cCCCCCCCCCCcHHHHHHHHHHHHHCCCCeE--eeeeecccCcHHHHHhcCCceEEEe
Confidence 55542 23444442 22333 356789999999999987532 22 23456788999999877 7766554
Q ss_pred eccCCCCCCC---CCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 385 LGMNDETKGK---FETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 385 ~g~~~~~pg~---~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
++.. |++ ..++|++||++++++|.+++++|+.++.
T Consensus 387 p~~~---~~~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~ 424 (426)
T PRK07906 387 PLRL---PPDLDFAALFHGVDERVPVDALRFGVRVLDRFLR 424 (426)
T ss_pred cccc---CccccccccCcCCCCceeHHHHHHHHHHHHHHHH
Confidence 3211 111 2579999999999999999999999985
No 39
>PRK13381 peptidase T; Provisional
Probab=100.00 E-value=7.6e-47 Score=375.83 Aligned_cols=344 Identities=17% Similarity=0.177 Sum_probs=271.8
Q ss_pred HHHHHHHhHhCCCCCC----------CcHHHHHHHHHHHHhCCCCeEecccCceEEEEECCC-CC-cEEEEEEecccccC
Q 014490 52 MVNIRRKIHENPELGF----------QEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG-QP-PFVALRADMDALAM 119 (423)
Q Consensus 52 ~~~~~~~l~~ips~s~----------~E~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~~-~~-~~ill~~H~Dtvp~ 119 (423)
+++.+.++++|||+|+ .+.++++||.++|+++|++....+.++||+|+++++ ++ |+|+|+||+||||+
T Consensus 3 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~nvi~~~~g~~~~~~~lll~~H~D~Vp~ 82 (404)
T PRK13381 3 LTDRFFRYLKVNSQSDAASGTLPSTPGQHELAKLLADELRELGLEDIVIDEHAIVTAKLPGNTPGAPRIGFIAHLDTVDV 82 (404)
T ss_pred HHHHhHhhEEEeccCCCCCCCCcCChhHHHHHHHHHHHHHHcCCCcEEEcCCeEEEEEEecCCCCCCeEEEEEEecCCCc
Confidence 5677889999999997 368899999999999999755556788999999653 44 99999999999998
Q ss_pred cCCC--C-----Ccc------------------c----CCCCCccccCCc-------hHHHHHHHHHHHHHHhccccCCc
Q 014490 120 EESV--E-----WEH------------------K----SKVPGKMHACGH-------DAHVAMLLGAAKMLQVFRHEIKG 163 (423)
Q Consensus 120 ~~~~--~-----w~~------------------~----~~~~g~~~grG~-------k~~~a~~l~a~~~l~~~~~~~~~ 163 (423)
++.. . |.. + ...+|++||||+ |++++++|.|+++|++.+ .+++
T Consensus 83 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GrG~~~~g~DmKgg~aa~l~a~~~l~~~~-~~~g 161 (404)
T PRK13381 83 GLSPDIHPQILRFDGGDLCLNAEQGIWLRTAEHPELLNYQGEDIIFSDGTSVLGADNKAAIAVVMTLLENLTENE-VEHG 161 (404)
T ss_pred cCCCCcCcEEEecCCCceecCCccceeechHhChhHHhccCCcEEeCCCccccccccHHHHHHHHHHHHHHHhcC-CCCC
Confidence 7531 1 110 0 124678999995 899999999999998775 4688
Q ss_pred eEEEEEecCCC-CcccHHHHHhcCCCcccceeeeeccCCCCCCceEEeecCcccCcceEEEEEEEeCCCCCC-CCCCCCc
Q 014490 164 TIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAA-IPQHTID 241 (423)
Q Consensus 164 ~i~~~~~~~EE-g~~Ga~~~~~~~~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~-~p~~g~n 241 (423)
+|.|+|+++|| |+.|++.++.++. ..|++++++. ++|. .+. ..++|..|++|+++|+++|++ .|+.|.|
T Consensus 162 ~i~~~~~~dEE~g~~G~~~~~~~~~--~~d~~~~~~~--~~~~-~i~----~~~~G~~~~~v~v~Gk~aHa~~~p~~g~N 232 (404)
T PRK13381 162 DIVVAFVPDEEIGLRGAKALDLARF--PVDFAYTIDC--CELG-EVV----YENFNAASAEITITGVTAHPMSAKGVLVN 232 (404)
T ss_pred CEEEEEEcccccccccHHHHHHhcC--CCCEEEEecC--CCcc-eEE----EecCcceEEEEEEEeEecCCCCCcccCcC
Confidence 99999999999 7789999976643 3577776543 3443 332 235799999999999999988 4888999
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEecCCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcC-
Q 014490 242 PIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQR- 320 (423)
Q Consensus 242 Ai~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~- 320 (423)
||..+++++.+|+++..+........+++++.++|+ |++|++.+|+|+.|.++.+.+.+.|++++++.+..++
T Consensus 233 AI~~a~~~i~~l~~~~~~~~~~~~~~~i~v~~i~g~------p~~~~~~~diR~~~~~~~e~i~~~i~~~~~~~~~~~~~ 306 (404)
T PRK13381 233 PILMANDFISHFPRQETPEHTEGREGYIWVNDLQGN------VNKAKLKLIIRDFDLDGFEARKQFIEEVVAKINAKYPT 306 (404)
T ss_pred HHHHHHHHHHhCCccCCCCCCCCcccEEEEEeEEeC------cceEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999876433322223356888888764 8999999999999999999999999999999887766
Q ss_pred CeEEEEeeccCCCC--ccccCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhh-cCeEEEEeccCCCCCCCCCC
Q 014490 321 CNATVTFDDKSFYP--VTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFET 397 (423)
Q Consensus 321 ~~~~~~~~~~~~~~--~~~~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pg~~~~ 397 (423)
.++++++......+ ....++++++.+++++++. |.++. ....+|++|+++|... +|++++++| . ..
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~lv~~l~~a~~~~-g~~~~--~~~~~g~tDa~~~~~~giP~v~~GpG-------~-~~ 375 (404)
T PRK13381 307 ARVSLTLTDQYSNISNSIKDDRRAVDLAFDAMKEL-GIEPK--VIPMRGGTDGAALSAKGLPTPNLFTG-------A-HN 375 (404)
T ss_pred cEEEEEEEeCCchhhcccccCHHHHHHHHHHHHHc-CCCee--eccCCccchHHHHhcCCCCeEEECcc-------c-cC
Confidence 56666542111212 2456789999999999875 77653 3467789999999876 999887654 2 34
Q ss_pred CCCCCccCCCCchHHHHHHHHHHHh
Q 014490 398 GHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 398 ~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
+|++||||++++|.+++++|+.++.
T Consensus 376 aH~~dE~v~i~~l~~~~~v~~~~~~ 400 (404)
T PRK13381 376 FHSRFEFLPVSSFVKSYEVTITICL 400 (404)
T ss_pred CcCcceeEEHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999875
No 40
>TIGR01886 dipeptidase dipeptidase PepV. This model represents a small clade of dipeptidase enzymes which are members of the larger M25 subfamily of metalloproteases. Two characterized enzymes are included in the seed. One, from Lactococcus lactis has been shown to act on a wide range of dipeptides, but not larger peptides. The enzyme from Lactobacillus delbrueckii was originally characterized as a Xaa-His dipeptidase, specifically a carnosinase (beta-Ala-His) by complementation of an E. coli mutant. Further study, including the crystallization of the enzyme, has shown it to also be a non-specific dipeptidase. This group also includes enzymes from Streptococcus and Enterococcus.
Probab=100.00 E-value=9.6e-47 Score=380.16 Aligned_cols=355 Identities=14% Similarity=0.048 Sum_probs=267.5
Q ss_pred HHHhhcCchhHHHHHHHHHHhHhCCCCCCC------------cHHHHHHHHHHHHhCCCCeEecccCceEEEEEC-CCCC
Q 014490 39 FLDFAKKPEIFYWMVNIRRKIHENPELGFQ------------EFETSKLIRAELDQMGIPYKFPVAVTGVVGYIG-TGQP 105 (423)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~l~~ips~s~~------------E~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~-~~~~ 105 (423)
+.++++.++ +++++++++|++|||++.+ +.++++|+.++|+++||+++..+ |+++.+. ++++
T Consensus 4 ~~~~i~~~~--~~~~~~l~~lv~ipS~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~G~~~~~~~---~~~~~~~~~~~~ 78 (466)
T TIGR01886 4 FKEEVEARK--DALLEDLEELLRIDSSEDLENATEEYPFGPGPVDALTKFLSFAERDGFTTKNFD---NYAGHVEYGAGD 78 (466)
T ss_pred HHHHHHHhH--HHHHHHHHHHhCCCCcCCCCCCCccCCCChhHHHHHHHHHHHHHHCCCeEEEec---CCceeEEecCCC
Confidence 455666666 8999999999999999753 46688999999999999987532 4444442 2335
Q ss_pred cEEEEEEecccccCcCCCCCccc----CCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Ccc
Q 014490 106 PFVALRADMDALAMEESVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGG 177 (423)
Q Consensus 106 ~~ill~~H~Dtvp~~~~~~w~~~----~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~ 177 (423)
|+|+|+||+||||+++ .|.++ .++||++||||+ ||+++++|.|+++|++.+..++++|.|+|+++|| |+.
T Consensus 79 ~~l~~~gH~DvVp~~~--~W~~~Pf~~~~~dg~lyGRG~~D~Kg~~~a~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~ 156 (466)
T TIGR01886 79 ERLGIIGHMDVVPAGE--GWTRDPFEPEIDEGRIYARGASDDKGPSLAAYYAMKILKELGLPPSKKIRFVVGTNEETGWV 156 (466)
T ss_pred CEEEEEeecccCCCCC--CCcCCCCCeEEECCEEEecCccccchHHHHHHHHHHHHHHhCCCCCCCEEEEEECccccCcc
Confidence 8999999999999974 58644 467899999998 8999999999999999998899999999999999 789
Q ss_pred cHHHHHhcCCCcccceeeeeccCC----CCCCceE---Eee-----------------------------c---------
Q 014490 178 GAKKMLDAGALENVEAIFGLHVSS----LFPVGTV---ASR-----------------------------P--------- 212 (423)
Q Consensus 178 Ga~~~~~~~~~~~~d~~i~~~~~~----~~p~g~~---~~~-----------------------------~--------- 212 (423)
|++++++++. ..|++++.+.+. +++.... ..+ .
T Consensus 157 g~~~~~~~~~--~~d~~~~~d~~~~~~~ge~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~i~~~~~~~~~~ 234 (466)
T TIGR01886 157 DMDYYFKHEE--TPDFGFSPDAEFPIINGEKGNFTLELSFKGDNKGDYVLDSFKAGLAENMVPQVARAVISGPDAEALKA 234 (466)
T ss_pred cHHHHHhcCc--CCCEEEECCCCceeEEEecceEEEEEEEecCCCCceeEEEEEcCCcCCccCCeeEEEEecCCHHHHHH
Confidence 9999998754 245544321100 1111110 000 0
Q ss_pred ----CcccCcce---------EEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHH-------------HHhhc--------
Q 014490 213 ----GPTLAAGG---------FFEAVINGKGGHAAIPQHTIDPIVAASNVIVSL-------------QHLVS-------- 258 (423)
Q Consensus 213 ----g~~~~g~~---------~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l-------------~~~~~-------- 258 (423)
...++|.. |++|+++|+++|+|.|+.|+|||..|++++..+ .++..
T Consensus 235 ~~~~~~~~kg~~~~~~~~~~~~~~i~v~G~~aH~s~P~~G~NAi~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 314 (466)
T TIGR01886 235 AYESFLADKASLDGSFEINDESATIVLIGKGAHGAAPQVGINSATFLALFLNQYAFAGGAKNFIHFLAEVEHEDFYGEKL 314 (466)
T ss_pred HHHHHHhhccCceEEEEEeCCEEEEEEEeeEcccCCCCCCcCHHHHHHHHHHhccCChhHHHHHHHHHHhcCCCCCcccC
Confidence 01244443 799999999999999999999999999988873 22110
Q ss_pred ---ccCCCCCCceEEEEEEecCCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCc
Q 014490 259 ---READPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPV 335 (423)
Q Consensus 259 ---~~~~~~~~~t~~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (423)
...+.++..++|++.|+||.. | ++|++.+|+|++|+++.+++.++|++.+.. ..++++.. ....|.
T Consensus 315 ~~~~~~~~~g~~S~nvgvI~gG~~-~---~~~~l~iD~R~~Pge~~eev~~eI~~~i~~-----~~~v~~~~--~~~~P~ 383 (466)
T TIGR01886 315 GIAFHDELMGDLAMNAGMFDFDHA-N---KESKLLLNFRYPQGTSPETMQKQVLDKFGG-----IVDVTYNG--HFEEPH 383 (466)
T ss_pred CCcccccCcCceEEEeEEEEEecC-C---ceEEEEEEEecCCCCCHHHHHHHHHHHHhc-----ccEEEEec--ccCCCc
Confidence 001124567999999999965 4 899999999999999999999999888863 22333211 111222
Q ss_pred -cccCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhhcCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHH
Q 014490 336 -TVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGA 414 (423)
Q Consensus 336 -~~~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~ 414 (423)
.+.++++++.+.+++++.+|.++ .+...+|+||+++|...+|..+ +| ||+..++|++|||+++++|.+++
T Consensus 384 ~~~~ds~lv~~l~~a~~~v~G~~~--~~~~~~ggTDa~~~~~~i~~gv--~g-----PG~~~~aH~~dE~V~i~el~~a~ 454 (466)
T TIGR01886 384 YVPGSDPLVQTLLKVYEKHTGKKG--HEVIIGGGTYGRLLERGVAYGA--MF-----EGGPDVMHQANEFMMLDDLILAA 454 (466)
T ss_pred ccCCCCHHHHHHHHHHHHHhCCCC--ceeeecCccHHHhccccccccc--cc-----CCCCCCccCCCcceEHHHHHHHH
Confidence 34567999999999999988755 3346899999999986565433 23 77778899999999999999999
Q ss_pred HHHHHHHh
Q 014490 415 ALHASLAT 422 (423)
Q Consensus 415 ~~~~~~i~ 422 (423)
++|+.++.
T Consensus 455 ~iy~~~i~ 462 (466)
T TIGR01886 455 AIYAEAIY 462 (466)
T ss_pred HHHHHHHH
Confidence 99999885
No 41
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism]
Probab=100.00 E-value=3.8e-46 Score=371.65 Aligned_cols=359 Identities=22% Similarity=0.286 Sum_probs=280.3
Q ss_pred HHHHHHHHHhHhCCCCC-CCcHHHHHHHHHHHHhCCCCeEecc-c----CceEEEEECCCCC-cEEEEEEecccccCcCC
Q 014490 50 YWMVNIRRKIHENPELG-FQEFETSKLIRAELDQMGIPYKFPV-A----VTGVVGYIGTGQP-PFVALRADMDALAMEES 122 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s-~~E~~~~~~l~~~l~~~g~~~~~~~-~----~~nvia~~~~~~~-~~ill~~H~Dtvp~~~~ 122 (423)
++++++++++++|||++ ..+.++++|+.++|+++|+.++... . .+|+++++.++.+ |+|+|+||+||||+++.
T Consensus 13 ~~~~~~l~~lv~~~s~s~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~n~~~~~~~~~~~~~l~l~~H~DvVP~g~~ 92 (409)
T COG0624 13 DDILELLKELVRIPSVSAGEEAEAAELLAEWLEELGFEVEEDEVGPGPGRPNLVARLGGGDGGPTLLLGGHLDVVPAGGG 92 (409)
T ss_pred HHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHcCCceEEeecCCCCCceEEEEEecCCCCCCeEEEeccccccCCCCc
Confidence 77889999999999999 8889999999999999999877632 2 4699999977654 99999999999999998
Q ss_pred CCCccc----CCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHhcCCC---ccc
Q 014490 123 VEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGAL---ENV 191 (423)
Q Consensus 123 ~~w~~~----~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~~~~~~~---~~~ 191 (423)
..|.++ ..+||++||||+ ||++++++.|++.+.+.+..++++|.++|++||| ++.|+..++..... ..+
T Consensus 93 ~~W~~~Pf~~~~~dg~lyGRG~~D~KG~~~a~l~A~~~l~~~~~~~~~~v~~~~~~dEE~g~~~~~~~~~~~~~~~~~~~ 172 (409)
T COG0624 93 EDWTTDPFEPTIKDGKLYGRGAADMKGGLAAALYALSALKAAGGELPGDVRLLFTADEESGGAGGKAYLEEGEEALGIRP 172 (409)
T ss_pred ccCccCCCccEEECCEEEecCccccchHHHHHHHHHHHHHHhCCCCCeEEEEEEEeccccCCcchHHHHHhcchhhccCC
Confidence 889653 456799999998 8999999999999999887899999999999999 77888888776542 345
Q ss_pred ceeeeeccCCCCCCceEEeecCcccCcceEEEEEEEeCCCCCCC--CCCCCc----HHHHHHHHHHHHHHhhcccCCCCC
Q 014490 192 EAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAI--PQHTID----PIVAASNVIVSLQHLVSREADPLD 265 (423)
Q Consensus 192 d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~--p~~g~n----Ai~~~~~~i~~l~~~~~~~~~~~~ 265 (423)
|+++..++....+.+..... +++|..+++|+++|+++|+|. |+.+.| |+..+.+++..+.++.....+.
T Consensus 173 d~~i~~E~~~~~~~~~~~~~---~~kG~~~~~v~v~G~~~Has~~~p~~~~n~i~~a~~~~~~~~~~~~~~~~~~~~~-- 247 (409)
T COG0624 173 DYEIVGEPTLESEGGDIIVV---GHKGSLWLEVTVKGKAGHASTTPPDLGRNPIHAAIEALAELIEELGDLAGEGFDG-- 247 (409)
T ss_pred CEEEeCCCCCcccCCCeEEE---cceeEEEEEEEEEeecccccccCCcccccHHHHHHHHHHHHHHHhcccccccccC--
Confidence 67665443100123333222 568999999999999999997 999999 4555555555444332211110
Q ss_pred CceEEEEEEecCCC--------CccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCccc
Q 014490 266 SQVLTVAKFEGGGA--------FNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTV 337 (423)
Q Consensus 266 ~~t~~v~~i~gg~~--------~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (423)
..+++++.+.++.. .|+||++|++.+|+|+.|.++.+++.+++++.++..+...++++++.........+.+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~nviP~~~~~~~d~R~~p~~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (409)
T COG0624 248 PLGLNVGLILAGPGASVNGGDKVNVIPGEAEATVDIRLLPGEDLDDVLEELEAELRAIAPKEGVEYEIEPGLGEPPLPVP 327 (409)
T ss_pred CccccccccccCCcccccCCccCceecceEEEEEEEecCCcCCHHHHHHHHHHHHHHhccccCceEEeccccCCccccCC
Confidence 36777776665544 5999999999999999999999999999999998776644566665531123333456
Q ss_pred cCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhh-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHH
Q 014490 338 NNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAAL 416 (423)
Q Consensus 338 ~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~ 416 (423)
.++++++.+.+++++.+|.+. .....++++|+.++... +|. ..+| ||....+|++|||++++++.+++++
T Consensus 328 ~~~~~v~~l~~~~~~~~g~~~--~~~~~G~~~da~~~~~~~~~~--~~fg-----p~~~~~~H~~~E~v~i~~l~~~~~~ 398 (409)
T COG0624 328 GDSPLVAALAEAAEELLGLPP--EVSTGGGTHDARFFARLGIPA--VIFG-----PGDIGLAHQPNEYVELEDLVKGAKV 398 (409)
T ss_pred CchHHHHHHHHHHHHhhCCCc--eecCCCCcchHHHHHhcCCee--EEEC-----CCCcccccCCCceeeHHHHHHHHHH
Confidence 678999999999999878763 33455577899999988 573 3456 5566789999999999999999999
Q ss_pred HHHHHh
Q 014490 417 HASLAT 422 (423)
Q Consensus 417 ~~~~i~ 422 (423)
|+.+++
T Consensus 399 ~~~~l~ 404 (409)
T COG0624 399 LARLLY 404 (409)
T ss_pred HHHHHH
Confidence 999986
No 42
>PRK07079 hypothetical protein; Provisional
Probab=100.00 E-value=3.1e-46 Score=377.95 Aligned_cols=365 Identities=13% Similarity=0.064 Sum_probs=271.7
Q ss_pred HHHHhhcCchhHHHHHHHHHHhHhCCCCCCC---cHHHHHHHH----HHHHhCCCCeEec-----ccCceEEEEECCC-C
Q 014490 38 KFLDFAKKPEIFYWMVNIRRKIHENPELGFQ---EFETSKLIR----AELDQMGIPYKFP-----VAVTGVVGYIGTG-Q 104 (423)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~---E~~~~~~l~----~~l~~~g~~~~~~-----~~~~nvia~~~~~-~ 104 (423)
++.++++. +++++++++|++|||+|++ +.++++|+. ++|+++||+++.. ..++||+++++++ +
T Consensus 9 ~~~~~~~~----~~~~~~L~~LV~ipSvs~~~~~~~~~~~~l~~~~~~~l~~~G~~~~~~~~~~~~~~~~vva~~~~~~~ 84 (469)
T PRK07079 9 RAAAYFDS----GAFFADLARRVAYRTESQNPDRAPALRAYLTDEIAPALAALGFTCRIVDNPVAGGGPFLIAERIEDDA 84 (469)
T ss_pred HHHHhhcc----HHHHHHHHHHhccCCCCCCcccHHHHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCEEEEEeCCCCC
Confidence 44555543 4689999999999999974 356677764 5899999998752 2468999998644 4
Q ss_pred CcEEEEEEecccccCcCCCCCc-----cc-CCCCCccccCCc---hHHHHHHHHHHHHHHhc-cccCCceEEEEEecCCC
Q 014490 105 PPFVALRADMDALAMEESVEWE-----HK-SKVPGKMHACGH---DAHVAMLLGAAKMLQVF-RHEIKGTIVLVFQPAEE 174 (423)
Q Consensus 105 ~~~ill~~H~Dtvp~~~~~~w~-----~~-~~~~g~~~grG~---k~~~a~~l~a~~~l~~~-~~~~~~~i~~~~~~~EE 174 (423)
+|+|+|+||+||||.++ ..|. |. .++||++||||+ ||+++++|.|+++|.+. +..++++|.|+|++|||
T Consensus 85 ~~~lll~gH~DvVp~~~-~~W~~~~~Pf~~~~~dg~lyGRGa~DmKgg~aa~l~A~~~l~~~~~~~~~~~i~~~~~~dEE 163 (469)
T PRK07079 85 LPTVLIYGHGDVVRGYD-EQWREGLSPWTLTEEGDRWYGRGTADNKGQHTINLAALEQVLAARGGRLGFNVKLLIEMGEE 163 (469)
T ss_pred CCEEEEEcccCCCCCCh-HHhcccCCCCcccccCCEEEEEeccCCcHHHHHHHHHHHHHHHhcCCCCCCCEEEEEECccc
Confidence 59999999999999753 5686 22 568999999998 89999999999998653 46788999999999999
Q ss_pred -CcccHHHHHhcCC-CcccceeeeeccCCCCCCceEEeecCcccCcceEEEEEEEeC--CCCCCCC-CCCCcHHHHHHHH
Q 014490 175 -GGGGAKKMLDAGA-LENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGK--GGHAAIP-QHTIDPIVAASNV 249 (423)
Q Consensus 175 -g~~Ga~~~~~~~~-~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~--~~Hs~~p-~~g~nAi~~~~~~ 249 (423)
|+.|+++++++.. .-..|++|+.++....+... ...++++|..+++|+++|+ +.||+.+ ..+.||+..++++
T Consensus 164 ~g~~G~~~l~~~~~~~~~~d~~iv~e~~~~~~~~~---~i~~g~kG~~~~~v~v~G~~~~~hs~~~~g~~~nai~~l~~a 240 (469)
T PRK07079 164 IGSPGLAEVCRQHREALAADVLIASDGPRLSAERP---TLFLGSRGAVNFRLRVNLRDGAHHSGNWGGLLRNPGTVLAHA 240 (469)
T ss_pred cCCccHHHHHHHhHHhcCCCEEEEeCCCccCCCCe---EEEEecceEEEEEEEEeeCCCCCCCCccccccCCHHHHHHHH
Confidence 8899999998642 11357777643221111111 1235678999999999998 4566632 2346999999999
Q ss_pred HHHHHHhhccc----------------------C----------------------CCCCCceEEEEEEecCC---CCcc
Q 014490 250 IVSLQHLVSRE----------------------A----------------------DPLDSQVLTVAKFEGGG---AFNI 282 (423)
Q Consensus 250 i~~l~~~~~~~----------------------~----------------------~~~~~~t~~v~~i~gg~---~~n~ 282 (423)
|.+|.+...+. . .....+++|++.|+||. ..|+
T Consensus 241 i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~nv~~i~gG~~~~~~Nv 320 (469)
T PRK07079 241 IASLVDARGRIQVPGLRPPPLPAAVRAALADITVGGGPGDPAIDPDWGEPGLTPAERVFGWNTLEVLAFKTGNPDAPVNA 320 (469)
T ss_pred HHHhCCCCCCEecCCccCCCCCHHHHHHHHhCCCchhhhccCcccccCCCCcCHHHHHhhCCceEEEeeecCCCCCcceE
Confidence 99985421000 0 00123589999999984 5899
Q ss_pred CCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCc--cccCHHHHHHHHHHHHHhcCCcccc
Q 014490 283 IPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPV--TVNNKNLHEHFQKVAADMLGVQNIK 360 (423)
Q Consensus 283 iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~~~~~l~~~~~~~~g~~~~~ 360 (423)
||++|++++|+|++|+++++++.++|++++++... .++++++ ...+++ .+.++++++.+.+++++.+|.++..
T Consensus 321 VP~~a~~~vdiR~~P~~~~e~v~~~l~~~i~~~~~---~~v~~~~--~~~~~p~~~~~~~~~v~~l~~a~~~~~g~~~~~ 395 (469)
T PRK07079 321 IPGSARAVCQLRFVVGTDWENLAPHLRAHLDAHGF---PMVEVTV--ERGSPATRLDPDDPWVRWALASIARTTGKKPAL 395 (469)
T ss_pred ecCceEEEEEEEcCCCCCHHHHHHHHHHHHHhcCC---CCeEEEE--eCCCCceecCCCCHHHHHHHHHHHHHhCCCCce
Confidence 99999999999999999999999999999886321 1345554 233444 3567889999999999988876532
Q ss_pred cCCCCCCCchHHHHHh-h-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 361 ENRPLMGTEDFSFFAE-A-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 361 ~~~~~~g~tD~~~~~~-~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
....+|++|+++|.. . +|++++ |+.. ||+ .+|++||||++++|.+++++|+.++.
T Consensus 396 -~~~~~g~~d~~~~~~~~giP~v~~--g~~~--~~~--~~H~~dE~v~l~~l~~~~~~~~~~~~ 452 (469)
T PRK07079 396 -LPNLGGSLPNDVFADILGLPTLWV--PHSY--PAC--SQHAPNEHLLASVAREGLQIMAGLFW 452 (469)
T ss_pred -ecCCCcchhHHHHHHHhCCCEEEe--cCCC--CCc--cCcCCCCCCCHHHHHHHHHHHHHHHH
Confidence 124567789888875 3 898754 4322 333 47999999999999999999999875
No 43
>PRK06156 hypothetical protein; Provisional
Probab=100.00 E-value=9.8e-46 Score=377.40 Aligned_cols=392 Identities=15% Similarity=0.155 Sum_probs=279.4
Q ss_pred chhhHHHHHHHHHhhcCCccccCCCChhhccccchHHHHhhcCchhHHHHHHHHHHhHhCCCCCC-----Cc----HHHH
Q 014490 3 SSKLLSLLVTLYLLAPTSISSDVSLSPEELTQIPVKFLDFAKKPEIFYWMVNIRRKIHENPELGF-----QE----FETS 73 (423)
Q Consensus 3 ~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ips~s~-----~E----~~~~ 73 (423)
.||++-.+++|..++...+...++.. .++++.-+. ..+.++ +++++++++|++|||+++ .| ...+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~--~~~~~~l~~lv~i~S~~~~~~~~~e~~~~~~~~ 78 (520)
T PRK06156 5 LKKLLAALLLLASLSAATQAAAATLT---KPQLDALLY-ARLKYG--AAAIESLRELVAFPTVRVEGVPQHENPEFIGFK 78 (520)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhhcc---ccccchhHH-hhhhhH--HHHHHHHHHhcCcCcccCCCCCccCCccHHHHH
Confidence 56766555554433333332323322 223332222 223444 889999999999999984 23 3567
Q ss_pred HHHHHHHHhCCCCeEecccCceEE-EEECCCCCcEEEEEEecccccCcCCCCCcc-----c----CCCCCccccCCc---
Q 014490 74 KLIRAELDQMGIPYKFPVAVTGVV-GYIGTGQPPFVALRADMDALAMEESVEWEH-----K----SKVPGKMHACGH--- 140 (423)
Q Consensus 74 ~~l~~~l~~~g~~~~~~~~~~nvi-a~~~~~~~~~ill~~H~Dtvp~~~~~~w~~-----~----~~~~g~~~grG~--- 140 (423)
+||.++|+++|++++. ...+++ +++++.+.|+|+|+|||||||++. .+|.+ + .++||++||||+
T Consensus 79 ~~l~~~l~~~G~~~~~--~~~~v~~~~~~g~~~~~l~l~gH~DvVp~~~-~~W~~~~~~~~Pf~~~~~~g~lyGRG~~D~ 155 (520)
T PRK06156 79 KLLKSLARDFGLDYRN--VDNRVLEIGLGGSGSDKVGILTHADVVPANP-ELWVLDGTRLDPFKVTLVGDRLYGRGTEDD 155 (520)
T ss_pred HHHHHHHHHCCCeEEe--cCCeEEEEEecCCCCCeEEEEEecCccCCCC-ccCccCCccCCCCceEEECCEEEEcCcccc
Confidence 9999999999999853 233344 666644458999999999999865 46876 4 346899999998
Q ss_pred hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHhcCCCcccceeeeeccC----CCCCCc---------
Q 014490 141 DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVS----SLFPVG--------- 206 (423)
Q Consensus 141 k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~~~~~~~~~~d~~i~~~~~----~~~p~g--------- 206 (423)
|++++++|.|+++|++.+..++++|.|+|++||| |+.|+++++.++.. .++.+.++.+ .++|..
T Consensus 156 Kgg~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~G~~~~~~~~~~--~~~~~~~D~~~~~~~~E~~~~~~~i~~~~ 233 (520)
T PRK06156 156 KGAIVTALYAMKAIKDSGLPLARRIELLVYTTEETDGDPLKYYLERYTP--PDYNITLDAEYPVVTAEKGWGTIMATFPK 233 (520)
T ss_pred hHHHHHHHHHHHHHHHcCCCCCceEEEEEecccccCchhHHHHHHhcCC--CCeEEeeCCCCceEEEecceEEEEEEecC
Confidence 8999999999999998887788999999999999 88899999876542 2333221100 011110
Q ss_pred --------------------e------EEeec-----------------CcccCcce---------EEEEEEEeCCCCCC
Q 014490 207 --------------------T------VASRP-----------------GPTLAAGG---------FFEAVINGKGGHAA 234 (423)
Q Consensus 207 --------------------~------~~~~~-----------------g~~~~g~~---------~~~i~v~G~~~Hs~ 234 (423)
. ..... ..+++|.. |++|+++|+++|+|
T Consensus 234 ~~~~~~~~~l~~~~gG~~~n~ip~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~I~v~Gk~aHsS 313 (520)
T PRK06156 234 RAADGKGAEIVAMTGGAFANQIPQTAVATLSGGDPAALAAALQAAAAAQVKRHGGGFSIDFKRDGKDVTITVTGKSAHSS 313 (520)
T ss_pred cCCCCCceeEEEEEcCCcCCCCCCccEEEEecCCHHHHHHHHHHHHHHHHhhcccCceEEEEEcCCeEEEEEEeEECCCC
Confidence 0 00000 01122444 89999999999999
Q ss_pred CCCCCCcHHHHHHHHHHHHHHhhcc---------------------------cCCCCCCceEEEEEEecCCCCccCCCcE
Q 014490 235 IPQHTIDPIVAASNVIVSLQHLVSR---------------------------EADPLDSQVLTVAKFEGGGAFNIIPDSV 287 (423)
Q Consensus 235 ~p~~g~nAi~~~~~~i~~l~~~~~~---------------------------~~~~~~~~t~~v~~i~gg~~~n~iP~~a 287 (423)
.|+.|.|||..+++++.+|+++... ..+..+..+++++.|++|. +.|
T Consensus 314 ~P~~G~NAI~~aa~ii~~L~~~l~~~~~~~~~~~i~~~~~~~~~g~~~g~~~~~~~~g~~t~~~~~I~gg~------~~~ 387 (520)
T PRK06156 314 TPESGVNPVTRLALFLQSLDGDLPHNHAADAARYINDLVGLDYLGEKFGVAYKDDFMGPLTLSPTVVGQDD------KGT 387 (520)
T ss_pred CCCCCccHHHHHHHHHHhccccccchhHHHHHHHHHHhhCCCCccCcCCccccCCCccCcEEeeeEEEEeC------CeE
Confidence 9999999999999999999752100 0111245678888888875 579
Q ss_pred EEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCC-ccccCHHHHHHHHHHHHHhcCCcccccCCCCC
Q 014490 288 TIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYP-VTVNNKNLHEHFQKVAADMLGVQNIKENRPLM 366 (423)
Q Consensus 288 ~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~~~~l~~~~~~~~g~~~~~~~~~~~ 366 (423)
++++|+|++|+++.+++.++|++.+++.+..++.++++.. ....| ..+.++++++.+.+++++.+|.++ .+...+
T Consensus 388 ~l~iDiR~~p~~~~eev~~~I~~~i~~~~~~~gv~ve~~~--~~~~p~~~~~d~~lv~~l~~a~~~~~G~~~--~~~~~~ 463 (520)
T PRK06156 388 EVTVNLRRPVGKTPELLKGEIADALAAWQAKHQVALDIDY--YWGEPMVRDPKGPWLKTLLDVFGHFTGLDA--KPVAIA 463 (520)
T ss_pred EEEEEeeCCCCCCHHHHHHHHHHHHHHHHhhcCceEEEee--cCCCceeeCCCCHHHHHHHHHHHHHhCCCC--ceeeec
Confidence 9999999999999999999999999887665666666543 22222 234578899999999999888866 345678
Q ss_pred CCchHHHHHhhcCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 367 GTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 367 g~tD~~~~~~~ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
|+||+++|. ++ +++||.. ||....+|++||+++++++.+++++|+.++.
T Consensus 464 ggTDa~~~~---~~--v~fGP~~--~g~~~~aHt~dE~V~ie~l~~~~~i~~~~l~ 512 (520)
T PRK06156 464 GSTNAKLFP---NA--VSFGPAM--PGVKYTGHTENEFKTVEQFMLDLQMYTEMLI 512 (520)
T ss_pred ChhhhhhCC---cc--EEEcCCC--CCCCCCCcCcccCCCHHHHHHHHHHHHHHHH
Confidence 999998874 33 3456443 4555579999999999999999999999875
No 44
>PRK12892 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=4e-45 Score=364.72 Aligned_cols=342 Identities=18% Similarity=0.188 Sum_probs=270.9
Q ss_pred HHHHHHHHHhHhCCC---------CCCCcHHHHHHHHHHHHhCCCCeEecccCceEEEEECCC-CCcEEEEEEecccccC
Q 014490 50 YWMVNIRRKIHENPE---------LGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG-QPPFVALRADMDALAM 119 (423)
Q Consensus 50 ~~~~~~~~~l~~ips---------~s~~E~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~~-~~~~ill~~H~Dtvp~ 119 (423)
+++++++++|++|+| .+++|.++++||.++|+++|++++.. .++|+++++++. ++|+|+|.||+||||.
T Consensus 10 ~~~~~~~~~~~~~~s~~~g~~~~s~~~~e~~~~~~l~~~l~~~G~~~~~~-~~~nl~a~~~g~~~~~~l~l~gH~DtVp~ 88 (412)
T PRK12892 10 QRVLDDLMELAAIGAAKTGVHRPTYSDAHVAARRRLAAWCEAAGLAVRID-GIGNVFGRLPGPGPGPALLVGSHLDSQNL 88 (412)
T ss_pred HHHHHHHHHHHccCCCCCCeeeCCCCHHHHHHHHHHHHHHHHcCCEEEEc-CCCcEEEEecCCCCCCeEEEEccccCCCC
Confidence 578888999999876 45568899999999999999998764 467999999653 4589999999999997
Q ss_pred cCCCCCcccCCCCCccccCCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCC-----c-ccHHHHHhcCCCc----
Q 014490 120 EESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEG-----G-GGAKKMLDAGALE---- 189 (423)
Q Consensus 120 ~~~~~w~~~~~~~g~~~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg-----~-~Ga~~~~~~~~~~---- 189 (423)
+ |++||+ +|++++|.|+++|++.+..++++|.|++++|||+ + .|++.++.+....
T Consensus 89 ~------------g~~dg~---~Gvaa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~ 153 (412)
T PRK12892 89 G------------GRYDGA---LGVVAGLEAARALNEHGIATRHPLDVVAWCDEEGSRFTPGFLGSRAYAGRLDPADALA 153 (412)
T ss_pred C------------Ccccch---HHHHHHHHHHHHHHHcCCCCCCCeEEEEecCcccccccCccccHHHHHcCCCHHHHHh
Confidence 4 446664 5899999999999998888999999999999994 3 5899887421100
Q ss_pred -------------------ccceeee-----------eccCC---CCCCceEEeecCcccCcceEEEEEEEeCCCCCCC-
Q 014490 190 -------------------NVEAIFG-----------LHVSS---LFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAI- 235 (423)
Q Consensus 190 -------------------~~d~~i~-----------~~~~~---~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~- 235 (423)
..|+++. +|.+. .++.+. .....++++|..+++|+++|+++|++.
T Consensus 154 ~~~~~~~~~~~~~~~~~g~~~d~~~~~ep~~~~~~~e~~~~~g~~~e~~~~-~~~i~~~~kG~~~~~i~v~G~~aHa~~~ 232 (412)
T PRK12892 154 ARCRSDGVPLRDALAAAGLAGRPRPAADRARPKGYLEAHIEQGPVLEQAGL-PVGVVTGIVGIWQYRITVTGEAGHAGTT 232 (412)
T ss_pred CccCCCCcCHHHHHHHcCCChhhcccccccCccEEEEEEeccCHhHhhCCC-cEEEEEEeccceEEEEEEEEECCCCCCC
Confidence 0111121 11111 011121 012235678999999999999999874
Q ss_pred CC-CCCcHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEecC-CCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHH
Q 014490 236 PQ-HTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGG-GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVM 313 (423)
Q Consensus 236 p~-~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gg-~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~ 313 (423)
|+ .|.|||..+++++.+|+++..+.. .+.+++++.|+|| ...|+||++|++++|+|++|.++.+++.++|+++++
T Consensus 233 p~~~g~nAi~~a~~~i~~l~~~~~~~~---~~~~~~vg~i~gg~~~~NvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~ 309 (412)
T PRK12892 233 PMALRRDAGLAAAEMIAAIDEHFPRVC---GPAVVTVGRVALDPGSPSIIPGRVEFSFDARHPSPPVLQRLVALLEALCR 309 (412)
T ss_pred CcccccCHHHHHHHHHHHHHHHHHhcC---CCcEEEEEEEEecCCCCeEECCeEEEEEEeeCCCHHHHHHHHHHHHHHHH
Confidence 65 688999999999999998653322 2379999999987 799999999999999999999999999999999999
Q ss_pred HHHHhcCCeEEEEeeccCCCCccccCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhhcCeEEEEeccCCCCCC
Q 014490 314 KQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKG 393 (423)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~g~~~~~pg 393 (423)
+.+..+++++++.. ...++++..|+++++.+++++++ +|.++. ....+|++|+++|.+.+|++++ +| ||
T Consensus 310 ~~~~~~~~~~e~~~--~~~~~~~~~d~~lv~~~~~a~~~-~g~~~~--~~~~~g~tDa~~~~~~ip~~~~-~g-----p~ 378 (412)
T PRK12892 310 EIARRRGCRVSVDR--IAEYAPAPCDAALVDALRAAAEA-AGGPYL--EMPSGAGHDAQNMARIAPSAML-FV-----PS 378 (412)
T ss_pred HHHHHhCCeEEEEE--EecCCCcCCCHHHHHHHHHHHHH-cCCCcc--ccCcchHHHHHHHHhHCCEEEE-Ee-----cc
Confidence 98877788887765 45677777889999999999998 587653 3467899999999888886544 34 34
Q ss_pred CCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 394 KFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 394 ~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
+...+|++||++++++|.+++++|+.++.
T Consensus 379 ~~~~~H~~~E~v~i~~l~~~~~il~~~l~ 407 (412)
T PRK12892 379 KGGISHNPAEDTSPADLAQGARVLADTLR 407 (412)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 34569999999999999999999999875
No 45
>PRK12893 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=4.4e-45 Score=364.37 Aligned_cols=342 Identities=17% Similarity=0.190 Sum_probs=270.0
Q ss_pred HHHHHHHHHhHhCCCC----------CCCcHHHHHHHHHHHHhCCCCeEecccCceEEEEECCC--CCcEEEEEEecccc
Q 014490 50 YWMVNIRRKIHENPEL----------GFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG--QPPFVALRADMDAL 117 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~----------s~~E~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~~--~~~~ill~~H~Dtv 117 (423)
+++++++++|++|||. |++|.++++||.++|+++|++++.. ...|++++++++ ++|+|+|.||+|||
T Consensus 10 ~~~~~~l~~l~~i~s~~~~~~~~~~~s~~e~~~~~~l~~~l~~~G~~~~~~-~~~n~~a~~~g~~~~~~~l~l~~H~DtV 88 (412)
T PRK12893 10 ERLWDSLMALARIGATPGGGVTRLALTDEDREARDLLAQWMEEAGLTVSVD-AIGNLFGRRAGTDPDAPPVLIGSHLDTQ 88 (412)
T ss_pred HHHHHHHHHHhcccCCCCCcEEeccCCHHHHHHHHHHHHHHHHcCCEEEEc-CCCcEEEEeCCCCCCCCEEEEEecccCC
Confidence 6789999999999964 4448999999999999999998763 456999999553 25899999999999
Q ss_pred cCcCCCCCcccCCCCCccccCCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-C-----cccHHHHHhcCCCc--
Q 014490 118 AMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-G-----GGGAKKMLDAGALE-- 189 (423)
Q Consensus 118 p~~~~~~w~~~~~~~g~~~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g-----~~Ga~~~~~~~~~~-- 189 (423)
|.+ |.++| |++++++|.|+++|++.+..++++|.|+|++||| + +.|+..+......+
T Consensus 89 p~~------------g~~dg---k~gvaa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~~~~~~G~~~~~~~~~~~~~ 153 (412)
T PRK12893 89 PTG------------GRFDG---ALGVLAALEVVRTLNDAGIRTRRPIEVVSWTNEEGARFAPAMLGSGVFTGALPLDDA 153 (412)
T ss_pred CCC------------Ccccc---hhhHHHHHHHHHHHHHcCCCCCCCeEEEEEccccccccccccccHHHHhCcCChHHH
Confidence 964 44566 5799999999999999887889999999999999 4 46888776442200
Q ss_pred ----c-------------------------cceeeeeccCCC---CCCceEEeecCcccCcceEEEEEEEeCCCCCCC-C
Q 014490 190 ----N-------------------------VEAIFGLHVSSL---FPVGTVASRPGPTLAAGGFFEAVINGKGGHAAI-P 236 (423)
Q Consensus 190 ----~-------------------------~d~~i~~~~~~~---~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~-p 236 (423)
. .+..+.+|..++ ++.+. .....++++|..+++|+++|+++|+|. |
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~i~~~~kG~~~~~i~v~G~~aHas~~p 232 (412)
T PRK12893 154 LARRDADGITLGEALARIGYRGTARVGRRAVDAYLELHIEQGPVLEAEGL-PIGVVTGIQGIRWLEVTVEGQAAHAGTTP 232 (412)
T ss_pred HhccCCCCCCHHHHHHHcCCCcccccccCCccEEEEEEeccCHHHHHCCC-cEEEEeeecccEEEEEEEEEECCCcCCCc
Confidence 0 111222222111 00110 112335678999999999999999985 8
Q ss_pred C-CCCcHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEecC-CCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHH
Q 014490 237 Q-HTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGG-GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMK 314 (423)
Q Consensus 237 ~-~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gg-~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~ 314 (423)
+ .|.|||..+++++.+|+++..+.. ...+++++.|++| ...|+||++|++++|+|++|+++.+++.++|++++++
T Consensus 233 ~~~G~NAI~~a~~~i~~l~~~~~~~~---~~~~~~vg~i~ggg~~~NvVP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~ 309 (412)
T PRK12893 233 MAMRRDALVAAARIILAVERIAAALA---PDGVATVGRLRVEPNSRNVIPGKVVFTVDIRHPDDARLDAMEAALRAACAK 309 (412)
T ss_pred chhccCHHHHHHHHHHHHHHHHHhcC---CCceEEEEEEEeeCCCceEECCeeEEEEEeeCCCHHHHHHHHHHHHHHHHH
Confidence 5 799999999999999998754322 2468999999985 7999999999999999999999999999999999998
Q ss_pred HHHhcCCeEEEEeeccCCCCccccCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhhcCeEEEEeccCCCCCCC
Q 014490 315 QASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGK 394 (423)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~g~~~~~pg~ 394 (423)
.+..++++++++. ...++++..++++++.+++++++. |.++ .....+|+||+++|.+.+|++++ +| |++
T Consensus 310 ~~~~~~~~v~~~~--~~~~~~~~~d~~l~~~l~~~~~~~-g~~~--~~~~~~g~tD~~~~~~~~p~~v~-~g-----p~~ 378 (412)
T PRK12893 310 IAAARGVQVTVET--VWDFPPVPFDPALVALVEAAAEAL-GLSH--MRMVSGAGHDAMFLARVAPAAMI-FV-----PCR 378 (412)
T ss_pred HHHHcCCeEEEEE--EecCCCcCCCHHHHHHHHHHHHHc-CCCc--cccCCccHHHHHHHHhhCCEEEE-Ee-----ecC
Confidence 8877787777765 345777778899999999999875 7765 33567899999999888885443 34 333
Q ss_pred CCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 395 FETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 395 ~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
...+|++||++++++|.+++++|+.++.
T Consensus 379 ~~~~Hs~dE~v~i~~l~~~~~i~~~ll~ 406 (412)
T PRK12893 379 GGISHNEAEDTEPADLAAGANVLLHAVL 406 (412)
T ss_pred CCCCCCccccCCHHHHHHHHHHHHHHHH
Confidence 3568999999999999999999999875
No 46
>PRK05469 peptidase T; Provisional
Probab=100.00 E-value=3.6e-45 Score=364.28 Aligned_cols=347 Identities=16% Similarity=0.166 Sum_probs=270.4
Q ss_pred HHHHHHHHHhHhCCCCCCC----------cHHHHHHHHHHHHhCCCCeEecccCceEEEEECCC---CCcEEEEEEeccc
Q 014490 50 YWMVNIRRKIHENPELGFQ----------EFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG---QPPFVALRADMDA 116 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~~----------E~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~~---~~~~ill~~H~Dt 116 (423)
+++++.++++++|||+|.+ |.++++||.++|+++|++....+..+||++.++++ ++|+|+|+|||||
T Consensus 2 ~~~~~~l~~~~~i~s~s~~~~~~~~~~~~~~~~a~~l~~~l~~~G~~~~~~~~~~~v~~~~~g~~~~~~~~i~l~~H~D~ 81 (408)
T PRK05469 2 DKLLERFLRYVKIDTQSDENSTTVPSTEGQWDLAKLLVEELKELGLQDVTLDENGYVMATLPANVDKDVPTIGFIAHMDT 81 (408)
T ss_pred chHHHHHHhhEEeecccCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeEEECCCeEEEEEecCCCCCCCCeEEEEEeccC
Confidence 5688899999999999976 78999999999999999733334567999999653 2499999999999
Q ss_pred ccCcCC---------------------CCCcccC--------CCCCccccCC-----c--hHHHHHHHHHHHHHHhcccc
Q 014490 117 LAMEES---------------------VEWEHKS--------KVPGKMHACG-----H--DAHVAMLLGAAKMLQVFRHE 160 (423)
Q Consensus 117 vp~~~~---------------------~~w~~~~--------~~~g~~~grG-----~--k~~~a~~l~a~~~l~~~~~~ 160 (423)
||+.+. ..|++++ ..++.+|||| + |++++++|.|+++|++.+..
T Consensus 82 vp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~rG~~~lg~D~Kgglaa~l~a~~~l~~~~~~ 161 (408)
T PRK05469 82 APDFSGKNVKPQIIENYDGGDIALGDGNEVLSPAEFPELKNYIGQTLITTDGTTLLGADDKAGIAEIMTALEYLIAHPEI 161 (408)
T ss_pred CCCCCCCCCCCEEeccCCCcceecCCCceEechHhCchHHhccCCCEEEcCCCEeecccchHHHHHHHHHHHHHHhCCCC
Confidence 987541 2344332 1235678877 2 89999999999999887666
Q ss_pred CCceEEEEEecCCCCcccHHHHHhcCCCcccceeeeeccCCCCCCceEEeecCcccCcceEEEEEEEeCCCCCC-CCCCC
Q 014490 161 IKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAA-IPQHT 239 (423)
Q Consensus 161 ~~~~i~~~~~~~EEg~~Ga~~~~~~~~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~-~p~~g 239 (423)
++++|.|+|+++||.+.|++.++.++. ..++.++++. .+.|.+.. ..+|..+|+|+++|+++|++ .|+.|
T Consensus 162 ~~g~v~~~f~~dEE~g~Ga~~~~~~~~--~~~~~~~~~~---~~~g~~~~----~~~g~~~~~i~v~Gk~~Ha~~~p~~g 232 (408)
T PRK05469 162 KHGDIRVAFTPDEEIGRGADKFDVEKF--GADFAYTVDG---GPLGELEY----ENFNAASAKITIHGVNVHPGTAKGKM 232 (408)
T ss_pred CCCCEEEEEecccccCCCHHHhhhhhc--CCcEEEEecC---CCcceEEe----ccCceeEEEEEEeeecCCCCCCcccc
Confidence 789999999999993389998865432 2455554432 35565433 24688999999999999987 58999
Q ss_pred CcHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEecCCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhc
Q 014490 240 IDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQ 319 (423)
Q Consensus 240 ~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~ 319 (423)
.|||..+++++..|+++..+........+++++.++|| |++|++.+|+|+.+.++.+.+.++|++++++.+..+
T Consensus 233 ~nAi~~~~~~i~~l~~~~~~~~~~~~~~~i~~g~i~gg------p~~~~i~~diR~~~~e~~e~i~~~i~~~~~~~~~~~ 306 (408)
T PRK05469 233 VNALLLAADFHAMLPADETPETTEGYEGFYHLTSIKGT------VEEAELSYIIRDFDREGFEARKALMQEIAKKVNAKY 306 (408)
T ss_pred cCHHHHHHHHHHhCCCCCCCCCCCCceEEEEEEEEEEc------cceEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999998876432221122345788888876 799999999999999999999999999999988877
Q ss_pred -CCeEEEEeecc-CC-CCccccCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhh-cCeEEEEeccCCCCCCCC
Q 014490 320 -RCNATVTFDDK-SF-YPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKF 395 (423)
Q Consensus 320 -~~~~~~~~~~~-~~-~~~~~~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pg~~ 395 (423)
++++++++... .. .++..+++++++.+++++++. |.++. .....|++|+++|... +|++++++| +
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~a~~~~-g~~~~--~~~~~ggtD~~~~~~~giP~v~~gpG-------~- 375 (408)
T PRK05469 307 GEGRVELEIKDQYYNMREKIEPHPHIVDLAKQAMEDL-GIEPI--IKPIRGGTDGSQLSFMGLPCPNIFTG-------G- 375 (408)
T ss_pred CCCeEEEEEeehhhhhhhhhcCCHHHHHHHHHHHHHc-CCCcE--EecCCCcccHHHHhhCCCceEEECcC-------c-
Confidence 56777765211 11 124667899999999999986 87653 3467899999999876 998776543 2
Q ss_pred CCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 396 ETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 396 ~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
..+|++||++++++|.+++++|.+++.
T Consensus 376 ~~~H~~~E~v~i~~l~~~~~~~~~~~~ 402 (408)
T PRK05469 376 HNFHGKFEFVSLESMEKAVEVIVEIAE 402 (408)
T ss_pred ccCcCcceeeEHHHHHHHHHHHHHHHH
Confidence 249999999999999999999999875
No 47
>PRK07318 dipeptidase PepV; Reviewed
Probab=100.00 E-value=1.6e-45 Score=372.31 Aligned_cols=356 Identities=15% Similarity=0.151 Sum_probs=266.9
Q ss_pred HHHHhhcCchhHHHHHHHHHHhHhCCCCCCC------------cHHHHHHHHHHHHhCCCCeEecccCceEEEEEC-CCC
Q 014490 38 KFLDFAKKPEIFYWMVNIRRKIHENPELGFQ------------EFETSKLIRAELDQMGIPYKFPVAVTGVVGYIG-TGQ 104 (423)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~------------E~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~-~~~ 104 (423)
++.++++.++ +++++++++|++|||++++ +.++++||.++|+++|++++.. .|+++++. +++
T Consensus 4 ~~~~~~~~~~--~~~~~~l~~lv~i~S~~~~~~~~~~~p~~~~~~~~~~~l~~~~~~~G~~~~~~---~n~~~~~~~~~~ 78 (466)
T PRK07318 4 DWKKEVEKRK--DDLIEDLQELLRINSVRDDSKAKEGAPFGPGPVKALEKFLEIAERDGFKTKNV---DNYAGHIEYGEG 78 (466)
T ss_pred hHHHHHHHhH--HHHHHHHHHHhccCcccCCcccccCCCCCccHHHHHHHHHHHHHHCCCEEEEe---cCccceEEECCC
Confidence 3566777777 8899999999999999975 4679999999999999998753 26666653 233
Q ss_pred CcEEEEEEecccccCcCCCCCccc----CCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Cc
Q 014490 105 PPFVALRADMDALAMEESVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG 176 (423)
Q Consensus 105 ~~~ill~~H~Dtvp~~~~~~w~~~----~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~ 176 (423)
+|+|+|+||+||||+++ .|.++ .++||++||||+ ||+++++++|++.|++.+..++++|.|+|++||| |+
T Consensus 79 ~~~l~l~gH~DvVp~~~--~W~~~Pf~~~~~dg~lyGRG~~DmKgg~aa~l~Al~~l~~~g~~~~~~i~l~~~~DEE~g~ 156 (466)
T PRK07318 79 EEVLGILGHLDVVPAGD--GWDTDPYEPVIKDGKIYARGTSDDKGPTMAAYYALKIIKELGLPLSKKVRFIVGTDEESGW 156 (466)
T ss_pred CCEEEEEEecCCCCCCC--CCCCCCcceEEECCEEEEcccccCcHHHHHHHHHHHHHHHcCCCCCccEEEEEEcccccCc
Confidence 48999999999999874 58544 457899999997 8999999999999999888888999999999999 88
Q ss_pred ccHHHHHhcCCCcc----cce---eeeecc-----------------------CCCCCCceE------Eee---------
Q 014490 177 GGAKKMLDAGALEN----VEA---IFGLHV-----------------------SSLFPVGTV------ASR--------- 211 (423)
Q Consensus 177 ~Ga~~~~~~~~~~~----~d~---~i~~~~-----------------------~~~~p~g~~------~~~--------- 211 (423)
.|++++++...... .|. ++..++ .++.+++.+ ...
T Consensus 157 ~G~~~l~~~~~~~~~~~~~d~~~~vi~~E~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~ 236 (466)
T PRK07318 157 KCMDYYFEHEEAPDFGFSPDAEFPIINGEKGITTFDLVHFEGENEGDYVLVSFKSGLRENMVPDSAEAVITGDDLDDLIA 236 (466)
T ss_pred hhHHHHHHhCCCCCEEEEeCCCCcEEEEEeeeEEEEEEeccccCCCCceeEEEEcCccceecCcccEEEEecCCHHHHHH
Confidence 99999988642110 111 110000 001111110 000
Q ss_pred ------cCcccCcc-----eEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHh------h----c------------
Q 014490 212 ------PGPTLAAG-----GFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHL------V----S------------ 258 (423)
Q Consensus 212 ------~g~~~~g~-----~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~------~----~------------ 258 (423)
...+++|. .|++|+++|+++|++.|+.|.|||..|++++.+|+.. . .
T Consensus 237 ~~~~~~~~~~~kG~~~~~~~~~~i~v~G~aaH~s~p~~g~NAI~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (466)
T PRK07318 237 AFEAFLAENGLKGELEEEGGKLVLTVIGKSAHGSTPEKGVNAATYLAKFLNQLNLDGDAKAFLDFAAEYLHEDTRGEKLG 316 (466)
T ss_pred HHHHHHhhcCceEEEEecCCEEEEEEEeeEcccCCCccCccHHHHHHHHHHhccCchhHHHHHHHHHHhcCCCCCcccCC
Confidence 00134453 4799999999999999999999999999999998641 0 0
Q ss_pred --ccCCCCCCceEEEEEEecCCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCc-
Q 014490 259 --READPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPV- 335 (423)
Q Consensus 259 --~~~~~~~~~t~~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~- 335 (423)
......+..++|++.|+||... .|++.+|+|+.|+++.+++.++|++.+++ .+ ++++. ...++|
T Consensus 317 ~~~~~~~~g~~t~nvg~i~gg~~~-----~~~~~iDiR~~p~~~~~~v~~~i~~~~~~----~~--~~~~~--~~~~~p~ 383 (466)
T PRK07318 317 IAYEDDVMGDLTMNVGVFSFDEEK-----GGTLGLNFRYPVGTDFEKIKAKLEKLIGV----TG--VELSE--HEHQKPH 383 (466)
T ss_pred CcccCCCccCeEEEeeEEEEecCc-----EEEEEEEEeCCCCCCHHHHHHHHHHHHHh----cC--eEEEE--ccCCCce
Confidence 0011234579999999998532 79999999999999999999999888764 24 44443 233444
Q ss_pred -cccCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhhcCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHH
Q 014490 336 -TVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGA 414 (423)
Q Consensus 336 -~~~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~ 414 (423)
.+.++++++.+++++++.+|.++ .....+|++|+++|...+ .+|+.. ||+..++|++|||+++++|.+++
T Consensus 384 ~~~~d~~lv~~l~~a~~~~~g~~~--~~~~~~ggtDa~~~~~~i-----~~Gp~~--pg~~~~aH~~dE~v~i~~l~~~~ 454 (466)
T PRK07318 384 YVPKDDPLVKTLLKVYEKQTGLKG--EEQVIGGGTYARLLKRGV-----AFGAMF--PGSEDTMHQANEYIEIDDLIKAA 454 (466)
T ss_pred eeCCCCHHHHHHHHHHHHHhCCCC--CeeEEcchHhHhhCCCeE-----EeCCCC--CCCCCCCcCCCcceeHHHHHHHH
Confidence 35578999999999998778765 334678899999986533 355544 66667799999999999999999
Q ss_pred HHHHHHHh
Q 014490 415 ALHASLAT 422 (423)
Q Consensus 415 ~~~~~~i~ 422 (423)
++|+.++.
T Consensus 455 ~v~~~~l~ 462 (466)
T PRK07318 455 AIYAEAIY 462 (466)
T ss_pred HHHHHHHH
Confidence 99999875
No 48
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase. This clade of mainly archaeal and related bacterial species contains two characterized enzymes, an deacetylase with specificity for both N-acetyl-ornithine and N-acetyl-lysine from Thermus which is found within a lysine biosynthesis operon, and a fusion protein with acetyl-glutamate kinase (an enzyme of ornithine biosynthesis) from Lactobacillus. It is possible that all of the sequences within this clade have dual specificity, or that a mix of specificities have evolved within this clade.
Probab=100.00 E-value=1.6e-45 Score=357.79 Aligned_cols=321 Identities=13% Similarity=0.094 Sum_probs=252.5
Q ss_pred HHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEecccCceEEEEECCCCCcEEEEEEecccccCcCCCCCcccCCCCCc
Q 014490 55 IRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWEHKSKVPGK 134 (423)
Q Consensus 55 ~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~~~~~~ill~~H~Dtvp~~~~~~w~~~~~~~g~ 134 (423)
++++|++|||++++|.++++||+++|+++|+++.. +...|+++..++ ++|+|+|+||+||||. .|+. .++||+
T Consensus 2 ~l~~lv~i~s~s~~e~~~~~~l~~~l~~~g~~~~~-~~~~~~~~~~~~-~~~~i~~~~H~D~vp~----~~~~-~~~~g~ 74 (336)
T TIGR01902 2 LLKDLLEIYSPSGKEANAAKFLEEISKDLGLKLII-DDAGNFILGKGD-GHKKILLAGHVDTVPG----YIPV-KIEGGL 74 (336)
T ss_pred hHHHHhcCCCCCcchHHHHHHHHHHHHHcCCEEEE-CCCCcEEEEeCC-CCceEEEEccccccCC----Cccc-EEeCCE
Confidence 58899999999999999999999999999999854 345688887643 3599999999999984 3543 356899
Q ss_pred cccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHhcCCCcccceeeeeccCCCCCCceEEe
Q 014490 135 MHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVAS 210 (423)
Q Consensus 135 ~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~~~~~~~~~~d~~i~~~~~~~~p~g~~~~ 210 (423)
+||||+ |++++++|.|+++|++. +.+|.|++++||| |+.|++++++... .+++++. +|++.-
T Consensus 75 i~GrG~~D~Kg~~aa~l~a~~~l~~~----~~~i~~~~~~dEE~g~~G~~~~~~~~~---~~~~ii~-----ept~~~-- 140 (336)
T TIGR01902 75 LYGRGAVDAKGPLIAMIFATWLLNEK----GIKVIVSGLVDEESSSKGAREVIDKNY---PFYVIVG-----EPSGAE-- 140 (336)
T ss_pred EEEecccCCCcHHHHHHHHHHHHHhC----CCcEEEEEEeCcccCCccHHHHHhhcC---CCEEEEe-----cCCCCc--
Confidence 999998 89999999999999754 4689999999999 7789999988743 2355543 344321
Q ss_pred ecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHH-hhcccCCCCCCceEEEEEEecCCCCccCCCcEEE
Q 014490 211 RPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQH-LVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTI 289 (423)
Q Consensus 211 ~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~-~~~~~~~~~~~~t~~v~~i~gg~~~n~iP~~a~~ 289 (423)
....+++|..+++++++|+++|+|.|. ||+..+.+++..|.+ +..+. .....+++++.++||...|+||++|++
T Consensus 141 ~i~~~~kG~~~~~v~~~G~~~Hss~~~---~ai~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~i~gg~~~nvIP~~a~~ 215 (336)
T TIGR01902 141 GITLGYKGSLQLKIMCEGTPFHSSSAG---NAAELLIDYSKKIIEVYKQPE--NYDKPSIVPTIIRFGESYNDTPAKLEL 215 (336)
T ss_pred ceeeeeeeEEEEEEEEEecCcccCCCh---hHHHHHHHHHHHHHHHhcccc--CCCCCcceeEEEEccCCCcCCCceEEE
Confidence 123456899999999999999999875 599999999999873 32111 122457899999999999999999999
Q ss_pred EEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCcc--ccCHHHHHHHHHHHHHhcCCcccccCCCCCC
Q 014490 290 GGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVT--VNNKNLHEHFQKVAADMLGVQNIKENRPLMG 367 (423)
Q Consensus 290 ~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g 367 (423)
.+|+|+.|+++.+++.+++++ ....++ +. ...++|+ +.|+++++.++++++++ +.++ ......|
T Consensus 216 ~idiR~~p~~~~~~~~~~i~~-------~~~~~~--~~--~~~~~p~~~~~~~~lv~~~~~a~~~~-~~~~--~~~~~~g 281 (336)
T TIGR01902 216 HFDLRYPPNNKPEEAIKEITD-------KFPICL--EI--VDETPPYKVSRNNPLVRAFVRAIRKQ-GMKP--RLKKKTG 281 (336)
T ss_pred EEEEeeCCCCCHHHHHHHHHh-------ccCceE--EE--EeccCceecCCCCHHHHHHHHHHHHc-CCCe--EEeeccc
Confidence 999999999999988887775 123333 33 2233444 56789999999999987 5544 2235578
Q ss_pred CchHHHHHhh--cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 368 TEDFSFFAEA--IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 368 ~tD~~~~~~~--ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
++|+++|.+. +|++. +| ||+...+|++||+++++++.+++++|+.++.
T Consensus 282 ~tD~~~~~~~~g~p~v~--~G-----pg~~~~aH~~nE~v~i~~l~~~~~~~~~~l~ 331 (336)
T TIGR01902 282 TSDMNILAPIWTVPMVA--YG-----PGDSTLDHTPQEKISLAEYLIGIKTLMLAIE 331 (336)
T ss_pred cCccceeccccCCCeEE--EC-----CCCcccCCCCcceeEHHHHHHHHHHHHHHHH
Confidence 8999999875 56554 55 5555578999999999999999999999875
No 49
>PRK09290 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=1.2e-44 Score=361.01 Aligned_cols=341 Identities=16% Similarity=0.195 Sum_probs=269.2
Q ss_pred HHHHHHHHHhHhC-C---------CCCCCcHHHHHHHHHHHHhCCCCeEecccCceEEEEECCC--CCcEEEEEEecccc
Q 014490 50 YWMVNIRRKIHEN-P---------ELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG--QPPFVALRADMDAL 117 (423)
Q Consensus 50 ~~~~~~~~~l~~i-p---------s~s~~E~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~~--~~~~ill~~H~Dtv 117 (423)
+.+++++++|++| + |+|++|.++++||.++|+++||+++.. .++|++++++++ .+|.|+|.||+|||
T Consensus 7 ~~~~~~~~~l~~~~~~~~~g~~~~s~s~~e~~~a~~l~~~l~~~g~~~~~~-~~~nl~a~~~g~~~~~~~l~l~gH~DtV 85 (413)
T PRK09290 7 ERLWARLDELAKIGATPDGGVTRLALSPEDLQARDLFAEWMEAAGLTVRVD-AVGNLFGRLEGRDPDAPAVLTGSHLDTV 85 (413)
T ss_pred HHHHHHHHHHhcccCCCCCceeeccCCHHHHHHHHHHHHHHHHcCCEEEEc-CCCcEEEEecCCCCCCCEEEEecCccCC
Confidence 6678888888888 3 778889999999999999999998763 467999999653 35899999999999
Q ss_pred cCcCCCCCcccCCCCCccccCCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCC------cccHHHHHhcC-----
Q 014490 118 AMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEG------GGGAKKMLDAG----- 186 (423)
Q Consensus 118 p~~~~~~w~~~~~~~g~~~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg------~~Ga~~~~~~~----- 186 (423)
|++ |.++| |++++++|.|+++|++.+..++++|.|++++|||+ +.|++.+.+..
T Consensus 86 p~~------------g~~d~---k~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~G~~~~~~~~~~~~~ 150 (413)
T PRK09290 86 PNG------------GRFDG---PLGVLAGLEAVRTLNERGIRPRRPIEVVAFTNEEGSRFGPAMLGSRVFTGALTPEDA 150 (413)
T ss_pred CCC------------CCcCC---HHHHHHHHHHHHHHHHcCCCCCCCeEEEEEcCCccccccCccccHHHHHcccCHHHH
Confidence 974 22333 77999999999999998877889999999999993 25787775321
Q ss_pred ------------------CCcccceeeeeccCCC----------------CCCceEEeecCcccCcceEEEEEEEeCCCC
Q 014490 187 ------------------ALENVEAIFGLHVSSL----------------FPVGTVASRPGPTLAAGGFFEAVINGKGGH 232 (423)
Q Consensus 187 ------------------~~~~~d~~i~~~~~~~----------------~p~g~~~~~~g~~~~g~~~~~i~v~G~~~H 232 (423)
.+ +.|++++...+|. +|++.. ....++++|..+++|+++|+++|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~-~~d~~i~~~~ept~~~~~~~~~~~~~~~~e~~~~~-~~i~~~~kG~~~~~i~v~Gk~aH 228 (413)
T PRK09290 151 LALRDADGVSFAEALAAIGY-DGDEAVGAARARRDIKAFVELHIEQGPVLEAEGLP-IGVVTGIVGQRRYRVTFTGEANH 228 (413)
T ss_pred HhccCCCCCCHHHHHHHcCC-ChhhccccccCCCCccEEEEEEeccCHHHHHCCCc-EEEEeeeeccEEEEEEEEEECCC
Confidence 01 2244432100010 222211 12346678999999999999999
Q ss_pred CC-CC-CCCCcHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEecC-CCCccCCCcEEEEEEEecCChhhHHHHHHHHH
Q 014490 233 AA-IP-QHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGG-GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIE 309 (423)
Q Consensus 233 s~-~p-~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gg-~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~ 309 (423)
++ .| +.|.|||..+++++.+|+++..+.. ...+++++.+++| ...|+||++|++++|+|+.|+++.+++.++|+
T Consensus 229 as~~P~~~g~NAI~~~~~~i~~l~~l~~~~~---~~~~~~~g~i~~g~~~~NvIP~~a~~~~diR~~p~e~~e~v~~~i~ 305 (413)
T PRK09290 229 AGTTPMALRRDALLAAAEIILAVERIAAAHG---PDLVATVGRLEVKPNSVNVIPGEVTFTLDIRHPDDAVLDALVAELR 305 (413)
T ss_pred CCCCCchhccCHHHHHHHHHHHHHHHHHhcC---CCeEEEEEEEEEcCCCCeEECCEEEEEEEEeCCCHHHHHHHHHHHH
Confidence 98 68 5799999999999999988753221 2368999999975 78999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCeEEEEeeccCCCCccccCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhhcCeEEEEeccCC
Q 014490 310 EVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMND 389 (423)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~g~~~ 389 (423)
+++++.+..+++++++.. ...++++..++++++.+++++++. |.++ .....+|++|+++|.+.+|+++++ |
T Consensus 306 ~~~~~~~~~~~~~~e~~~--~~~~~~~~~d~~lv~~l~~a~~~~-g~~~--~~~~~~g~tDa~~~~~~iP~~~~~-g--- 376 (413)
T PRK09290 306 AAAEAIAARRGVEVEIEL--ISRRPPVPFDPGLVAALEEAAERL-GLSY--RRLPSGAGHDAQILAAVVPTAMIF-V--- 376 (413)
T ss_pred HHHHHHHHHcCCeEEEEE--EecCCCccCCHHHHHHHHHHHHHc-CCCc--cccCCccchHHHHHhccCCEEEEE-e---
Confidence 999988777777777765 445777778899999999999776 7654 234678999999997779975543 3
Q ss_pred CCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 390 ETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 390 ~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
|+....+|++||++++++|.+++++|+.++.
T Consensus 377 --p~~~~~~H~~dE~v~i~~l~~~~~v~~~~l~ 407 (413)
T PRK09290 377 --PSVGGISHNPAEFTSPEDCAAGANVLLHALL 407 (413)
T ss_pred --ccCCCCCCCccccCCHHHHHHHHHHHHHHHH
Confidence 3333568999999999999999999999875
No 50
>TIGR01882 peptidase-T peptidase T. This model represents a tripeptide aminopeptidase known as Peptidase T, which has a substrate preference for hydrophobic peptides.
Probab=100.00 E-value=5.8e-45 Score=362.37 Aligned_cols=345 Identities=15% Similarity=0.163 Sum_probs=265.1
Q ss_pred HHHHHHHHHhHhCCCCCC----------CcHHHHHHHHHHHHhCCCC-eEecccCceEEEEECCCCC---cEEEEEEecc
Q 014490 50 YWMVNIRRKIHENPELGF----------QEFETSKLIRAELDQMGIP-YKFPVAVTGVVGYIGTGQP---PFVALRADMD 115 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~----------~E~~~~~~l~~~l~~~g~~-~~~~~~~~nvia~~~~~~~---~~ill~~H~D 115 (423)
+.+++.+.++++|+|.|+ .|.++++||.++|+++|++ ++.+...+||+|++++..+ |+|+|.+|||
T Consensus 3 ~~~~~~f~~~~~i~s~s~~~~~~~ps~~~~~~~a~~l~~~l~~lG~~~v~~d~~~gnv~~~~~~~~~~~~~~i~~~aHmD 82 (410)
T TIGR01882 3 EELLPRFLTYVKVNTRSDENSDTCPSTPGQLTFGNMLVDDLKSLGLQDAHYDEKNGYVIATIPSNTDKDVPTIGFLAHVD 82 (410)
T ss_pred hHHHHHHHhhEEEecccCCCCCCCCCCHhHHHHHHHHHHHHHHcCCceEEEcCCceEEEEEecCCCCCCCCEEEEEEecc
Confidence 567788888999999997 5668999999999999997 6665437899999865443 9999999999
Q ss_pred cccCcCCC-------------------------CCccc-----------CCCCCccccCCchHHHHHHHHHHHHHHhccc
Q 014490 116 ALAMEESV-------------------------EWEHK-----------SKVPGKMHACGHDAHVAMLLGAAKMLQVFRH 159 (423)
Q Consensus 116 tvp~~~~~-------------------------~w~~~-----------~~~~g~~~grG~k~~~a~~l~a~~~l~~~~~ 159 (423)
|||..... .|.|+ ...++.+||+.+|+++|++|.|+++|++.+.
T Consensus 83 Tv~~~~~~v~p~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~g~~l~G~D~KgglAa~l~A~~~L~e~~~ 162 (410)
T TIGR01882 83 TADFNGENVNPQIIENYDGESIIQLGDLEFTLDPDQFPNLSGYKGQTLITTDGTTLLGADDKAGIAEIMTAADYLINHPE 162 (410)
T ss_pred cCcCCCCCCCCEEEecCCCceeeecCCCCeEEChHhChhHHhccCceEEEcCCCEeecccCHHHHHHHHHHHHHHHhCCC
Confidence 99842221 34332 1446699998889999999999999988643
Q ss_pred cCCceEEEEEecCCCCcccHHHHHhcCCCcccceeeeeccCCCCCCceEEeecCcccCcceEEEEEEEeCCCCCCCC-CC
Q 014490 160 EIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIP-QH 238 (423)
Q Consensus 160 ~~~~~i~~~~~~~EEg~~Ga~~~~~~~~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p-~~ 238 (423)
.++++|.|+|+++||.+.|++.+..++. +.++.++++ ++|+|.+.++ ..|..+++|+++|+++|++.+ +.
T Consensus 163 ~~~g~I~~~ft~dEE~g~Ga~~l~~~~~--~~~~~~~i~---gep~g~i~~~----~~g~~~~~I~v~Gk~aHa~~~~~~ 233 (410)
T TIGR01882 163 IKHGTIRVAFTPDEEIGRGAHKFDVKDF--NADFAYTVD---GGPLGELEYE----TFSAAAAKITIQGNNVHPGTAKGK 233 (410)
T ss_pred CCCCCEEEEEECcccCCcCcchhhhhhc--CccEEEEeC---CCCCCeEEEc----cccceEEEEEEEEEecCcccChHH
Confidence 4688999999999994469988865433 344554443 4678876544 247899999999999999975 57
Q ss_pred CCcHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEecCCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHh
Q 014490 239 TIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASV 318 (423)
Q Consensus 239 g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~ 318 (423)
+.||+..+.+++..|..... + ...+-+++.+++|. .|.+|++|++.+|+|+.+.++.+.+.++|++++++.+..
T Consensus 234 g~nAi~~a~~~~~~l~~~~~----~-~~t~~~~g~i~~g~-i~giPd~a~l~~diR~~~~e~~e~i~~~i~~i~~~~~~~ 307 (410)
T TIGR01882 234 MINAAQIAIDLHNLLPEDDR----P-EYTEGREGFFHLLS-IDGTVEEAKLHYIIRDFEKENFQERKELMKRIVEKMNNE 307 (410)
T ss_pred HHHHHHHHHHHHHhcCCcCC----C-ccccceeEEEEEEe-EEEecCEEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998776654311 1 01111223455553 566999999999999999999999999999999998887
Q ss_pred cCC-eEEEEeeccCCC----CccccCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhh-cCeEEEEeccCCCCC
Q 014490 319 QRC-NATVTFDDKSFY----PVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETK 392 (423)
Q Consensus 319 ~~~-~~~~~~~~~~~~----~~~~~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~p 392 (423)
++. .+++++ ...+ ...++++++++.++++++++ |.++ ......|++|+++|... +|++.+++
T Consensus 308 ~g~~~v~~~~--~~~~~~~~~~~~~~~~lv~~~~~a~~~~-G~~~--~~~~~~ggtDa~~~~~~Gip~~~~G~------- 375 (410)
T TIGR01882 308 YGQDRIKLDM--NDQYYNMAEKIEKVMEIVDIAKQAMENL-GIEP--KISPIRGGTDGSQLSYMGLPTPNIFA------- 375 (410)
T ss_pred cCCceEEEEE--EeeecChhhccCCCHHHHHHHHHHHHHh-CCCC--cccccceechHHHHHhCCCCCCeEcC-------
Confidence 763 455554 2222 23467889999999999886 8765 33467899999999887 89877654
Q ss_pred CCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 393 GKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 393 g~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
|+ .++|++|||+++++|.+++++|++++.
T Consensus 376 G~-~~aHt~dE~v~i~~l~~~~~~~~~li~ 404 (410)
T TIGR01882 376 GG-ENMHGRFEYISVDNMVKAVDVIVEIAK 404 (410)
T ss_pred Cc-ccCcCCceEEEHHHHHHHHHHHHHHHH
Confidence 33 359999999999999999999999875
No 51
>PRK07205 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-44 Score=364.23 Aligned_cols=346 Identities=13% Similarity=0.066 Sum_probs=254.9
Q ss_pred HHHHHHHHHhHhCCCCCCCc----------HHHHHHHHHHHHhCCCCeEecccCceEEEEECCCCCcEEEEEEecccccC
Q 014490 50 YWMVNIRRKIHENPELGFQE----------FETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAM 119 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~~E----------~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~~~~~~ill~~H~Dtvp~ 119 (423)
+++++++++|++|||++++| .++++|+.++|+++|++++......+++++++. ++|+|+|+||+||||+
T Consensus 11 ~~~~~~l~~lv~i~S~s~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~g~-~~~~lll~gH~DvVp~ 89 (444)
T PRK07205 11 DACVAAIKTLVSYPSVLNEGENGTPFGQAIQDVLEATLDLCQGLGFKTYLDPKGYYGYAEIGQ-GEELLAILCHLDVVPE 89 (444)
T ss_pred HHHHHHHHHHcccccccCCCcCCCCCchhHHHHHHHHHHHHHhCCCEEEEcCCCeEEEEEecC-CCcEEEEEEeeccCCC
Confidence 78999999999999999765 568889999999999998765444567777643 3489999999999999
Q ss_pred cCCCCCccc----CCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHhcCCCcc-
Q 014490 120 EESVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALEN- 190 (423)
Q Consensus 120 ~~~~~w~~~----~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~~~~~~~~~- 190 (423)
++.++|.++ .++||++||||+ ||+++++|.|+++|++.+..++++|.|+|++||| ++.|++.+++......
T Consensus 90 ~~~~~W~~~Pf~~~v~dg~lyGRGa~DmKgglaa~l~Al~~l~~~~~~~~~~i~l~~~~dEE~g~~g~~~~~~~~~~~~~ 169 (444)
T PRK07205 90 GDLSDWQTPPFEAVEKDGCLFGRGTQDDKGPSMAALYAVKALLDAGVQFNKRIRFIFGTDEETLWRCMNRYNEVEEQATM 169 (444)
T ss_pred CCcccCCCCCCceEEECCEEEECCcccCcHHHHHHHHHHHHHHHcCCCCCCcEEEEEECCcccCcccHHHHHhCCCCCCe
Confidence 888889654 467899999998 8999999999999999888889999999999999 7789999876421100
Q ss_pred ---cce----ee--------eeccCCCCCCceEEeecC-----------------------cccCcc----eEEEEEEEe
Q 014490 191 ---VEA----IF--------GLHVSSLFPVGTVASRPG-----------------------PTLAAG----GFFEAVING 228 (423)
Q Consensus 191 ---~d~----~i--------~~~~~~~~p~g~~~~~~g-----------------------~~~~g~----~~~~i~v~G 228 (423)
.+. .+ .+. ++|++......| ...+|. .+.+|+++|
T Consensus 170 ~~~~~~~~~v~~~ekG~~~~~i~---~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~l~~~~~~~g~~~~~~~~~v~v~G 246 (444)
T PRK07205 170 GFAPDSSFPLTYAEKGLLQAKLV---GPGSDQLELEVGQAFNVVPAKASYQGPKLEAVKKELDKLGFEYVVKENEVTVLG 246 (444)
T ss_pred eECCCCCCceEEEEeceEEEEEE---eCCccceEEecCCcccccCceeEEEecCHHHHHHHHHhcCceEeecCcEEEEEe
Confidence 110 00 000 122221111111 011221 234899999
Q ss_pred CCCCCCCCCCCCcHHHHHHHHHHHHHHhhc-----c--------------cCC-CCCCceEEEEEEecCCCCccCCCcEE
Q 014490 229 KGGHAAIPQHTIDPIVAASNVIVSLQHLVS-----R--------------EAD-PLDSQVLTVAKFEGGGAFNIIPDSVT 288 (423)
Q Consensus 229 ~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~-----~--------------~~~-~~~~~t~~v~~i~gg~~~n~iP~~a~ 288 (423)
+++|+|.|+.|.|||..+++++.+++.... . ..+ ..+.+++|++. .|+||++|+
T Consensus 247 ~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~nvg~------~nvvP~~a~ 320 (444)
T PRK07205 247 KSVHAKDAPQGINAVIRLAKALVVLEPHPALDFLANVIGEDATGLNIFGDIEDEPSGKLSFNIAG------LTITKEKSE 320 (444)
T ss_pred EEcccCCCccCcCHHHHHHHHHHhccHHHHHHHHHHhcCCCCccccCCccccCCCcCCceEEeEE------EEEECCEEE
Confidence 999999999999999999999988865310 0 001 12356778765 389999999
Q ss_pred EEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCc--cccCHHHHHHHHHHHHHhcCCcccccCCCCC
Q 014490 289 IGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPV--TVNNKNLHEHFQKVAADMLGVQNIKENRPLM 366 (423)
Q Consensus 289 ~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~~~~~l~~~~~~~~g~~~~~~~~~~~ 366 (423)
+.+|+|+.|+++.+++.+.|++++++ .++++ +. ...++| .+.++++++.+.+++++.+|.+. .....+
T Consensus 321 ~~ld~R~~p~~~~e~v~~~i~~~~~~----~~v~~--~~--~~~~~p~~~~~~~~lv~~l~~~~~~~~g~~~--~~~~~g 390 (444)
T PRK07205 321 IRIDIRIPVLADKEKLVQQLSQKAQE----YGLTY--EE--FDYLAPLYVPLDSELVSTLMSVYQEKTGDDS--PAQSSG 390 (444)
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHH----cCcEE--EE--ecCCCceeeCCCcHHHHHHHHHHHHHhCCCC--ceEEec
Confidence 99999999999999999999988764 24333 32 122344 35678899999999999878754 223345
Q ss_pred CCchHHHHHhhcCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 367 GTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 367 g~tD~~~~~~~ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
|++|+..+ .|++ .+|+.. ||+...+|++|||++++++.+++++|+.++.
T Consensus 391 g~~~~~~~---~~~i--~~G~~~--Pg~~~~aH~~nE~v~i~~l~~~~~~l~~~l~ 439 (444)
T PRK07205 391 GATFARTM---PNCV--AFGALF--PGAPQTEHQANEHIVLEDLYRAMDIYAEAIY 439 (444)
T ss_pred cHHHHHhC---CCcE--EECCcc--CCCCCCCcCcccCccHHHHHHHHHHHHHHHH
Confidence 55554322 3433 467655 6777789999999999999999999999875
No 52
>PRK12891 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=3.6e-43 Score=350.14 Aligned_cols=341 Identities=16% Similarity=0.127 Sum_probs=265.6
Q ss_pred HHHHHHHHhHhCC----------CCCCCcHHHHHHHHHHHHhCCCCeEecccCceEEEEECCCC--CcEEEEEEeccccc
Q 014490 51 WMVNIRRKIHENP----------ELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQ--PPFVALRADMDALA 118 (423)
Q Consensus 51 ~~~~~~~~l~~ip----------s~s~~E~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~~~--~~~ill~~H~Dtvp 118 (423)
++++.+.+|-+|- +.+++|.++++||.++|+++|++++.+ ...|+++++.+.+ +|+|+|.||+||||
T Consensus 11 ~~~~~~~~~~~~~~~~~~g~~r~~~~~~e~~~~~~l~~~l~~~G~~v~~~-~~gNl~a~~~g~~~~~~~l~~~~H~DtVp 89 (414)
T PRK12891 11 RLWASLERMAQIGATPKGGVCRLALTDGDREARDLFVAWARDAGCTVRVD-AMGNLFARRAGRDPDAAPVMTGSHADSQP 89 (414)
T ss_pred HHHHHHHHHHhccCCCCCceeeccCCHHHHHHHHHHHHHHHHCCCEEEEC-CCCCEEEEecCCCCCCCeEEEEecccCCC
Confidence 4555566666652 224468999999999999999998875 4679999996542 49999999999999
Q ss_pred CcCCCCCcccCCCCCccccCCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCc------ccHHHH----------
Q 014490 119 MEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG------GGAKKM---------- 182 (423)
Q Consensus 119 ~~~~~~w~~~~~~~g~~~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg~------~Ga~~~---------- 182 (423)
.+. .. .+|+|++++|+|+++|++.+.+++++|.|++++|||++ .|++.+
T Consensus 90 ~gg------------~~---D~k~Gv~a~l~a~~~l~~~~~~~~~~i~v~~~~dEE~~~f~~~~~Gs~~~~g~~~~~~~~ 154 (414)
T PRK12891 90 TGG------------RY---DGIYGVLGGLEVVRALNDAGIETERPVDVVIWTNEEGSRFAPSMVGSGVFFGVYPLEYLL 154 (414)
T ss_pred CCc------------cc---cchhhHHHHHHHHHHHHHcCCCCCCCeEEEEecccccCcCCcccccHHHHhCCCCHHHHH
Confidence 752 11 34899999999999999999999999999999999942 477644
Q ss_pred --------------HhcCCCc-------ccceeeeeccCCC---CCCceEEeecCcccCcceEEEEEEEeCCCCCC-CCC
Q 014490 183 --------------LDAGALE-------NVEAIFGLHVSSL---FPVGTVASRPGPTLAAGGFFEAVINGKGGHAA-IPQ 237 (423)
Q Consensus 183 --------------~~~~~~~-------~~d~~i~~~~~~~---~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~-~p~ 237 (423)
.+.|+.. +.++.+.+|.+++ ++.+.. .....+++|..+++|+++|+++|+| .|+
T Consensus 155 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~e~h~e~g~vle~~~~~-~~iv~~~kG~~~~~v~v~Gk~aHa~~~P~ 233 (414)
T PRK12891 155 SRRDDTGRTLGEHLARIGYAGAEPVGGYPVHAAYELHIEQGAILERAGKT-IGVVTAGQGQRWYEVTLTGVDAHAGTTPM 233 (414)
T ss_pred hccCCCCCCHHHHHHHCCCCcccccccCCCCEEEEEEeCCCHHHHHCCCc-EEEEeeccCcEEEEEEEEeECCCCCCCCc
Confidence 2333311 1223444454432 122211 1123567899999999999999998 586
Q ss_pred -CCCcHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEecC-CCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHH
Q 014490 238 -HTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGG-GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQ 315 (423)
Q Consensus 238 -~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gg-~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~ 315 (423)
.|.|||..++++|..|+++..+. ....++|++.|+|| ...|+||++|++.+|+|++|.++.+.+.++|++++++.
T Consensus 234 ~~g~nAI~~aa~~i~~l~~~~~~~---~~~~t~~vg~I~gG~~~~NvVP~~~~~~~diR~~~~e~~e~v~~~i~~~~~~~ 310 (414)
T PRK12891 234 AFRRDALVGAARMIAFLDALGRRD---APDARATVGMIDARPNSRNTVPGECFFTVEFRHPDDAVLDRLDAALRAELARI 310 (414)
T ss_pred ccccCHHHHHHHHHHHHHHHHHhc---CCCeEEEEEEEEeeCCCcceECCeEEEEEEeeCCCHHHHHHHHHHHHHHHHHH
Confidence 58999999999999999875321 12469999999997 68999999999999999999999999999999999998
Q ss_pred HHhcCCeEEEEeeccCCCCccccCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhhcCeEEEEeccCCCCCCCC
Q 014490 316 ASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKF 395 (423)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~g~~~~~pg~~ 395 (423)
+..++++++++. ...++++..++++++.+++++++. |.+.. ....+|++|++++...+|+++++ | ||..
T Consensus 311 ~~~~~~~~~~~~--~~~~~~~~~d~~lv~~l~~a~~~~-G~~~~--~~~~~ggtDa~~~~~giPt~~~~-g-----p~~~ 379 (414)
T PRK12891 311 ADETGLRADIEQ--IFGYAPAPFAPGCIDAVRDAARAL-GLSHM--DIVSGAGHDACFAARGAPTGMIF-V-----PCVD 379 (414)
T ss_pred HHHhCCEEEEEE--EecCCCcCCCHHHHHHHHHHHHHc-CCCce--ecCCcchHHHHHHHhhCCEEEEE-E-----cCCC
Confidence 877788887766 456677788899999999998765 87653 34678999988876669975543 3 3444
Q ss_pred CCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 396 ETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 396 ~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
..+|++||++++++|..++++|+.++.
T Consensus 380 ~~aH~~dE~v~i~~l~~~~~il~~~l~ 406 (414)
T PRK12891 380 GLSHNEAEAITPEWFAAGADVLLRAVL 406 (414)
T ss_pred CCCCCccccCCHHHHHHHHHHHHHHHH
Confidence 568999999999999999999999875
No 53
>PRK12890 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=8e-43 Score=348.05 Aligned_cols=342 Identities=15% Similarity=0.147 Sum_probs=264.2
Q ss_pred HHHHHHHHHhHhCC---------CCCCCcHHHHHHHHHHHHhCCCCeEecccCceEEEEECCC--CCcEEEEEEeccccc
Q 014490 50 YWMVNIRRKIHENP---------ELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG--QPPFVALRADMDALA 118 (423)
Q Consensus 50 ~~~~~~~~~l~~ip---------s~s~~E~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~~--~~~~ill~~H~Dtvp 118 (423)
+++++.+..+.+|| |.+++|.++++||.++|+++||+++.. .+.|++|+++++ ++|.|+|.||+||||
T Consensus 9 ~~~~~~~~~~~~i~~~~~~~~~~s~~~~e~~~~~~l~~~l~~~G~~~~~~-~~~nlia~~~g~~~~~~~l~~~~H~DtVp 87 (414)
T PRK12890 9 ERLLARLEELAAIGRDGPGWTRLALSDEERAARALLAAWMRAAGLEVRRD-AAGNLFGRLPGRDPDLPPLMTGSHLDTVP 87 (414)
T ss_pred HHHHHHHHHHhccCCCCCceeeccCCHHHHHHHHHHHHHHHHCCCEEEEc-CCCcEEEEeCCCCCCCCEEEEeCcccCCC
Confidence 34555666666555 778899999999999999999998874 467999999654 358999999999999
Q ss_pred CcCCCCCcccCCCCCccccCCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCC-c-----ccHHHHHhcCCC----
Q 014490 119 MEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEG-G-----GGAKKMLDAGAL---- 188 (423)
Q Consensus 119 ~~~~~~w~~~~~~~g~~~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg-~-----~Ga~~~~~~~~~---- 188 (423)
.+ |... .|++++++|.++++|++.+..++++|.|++++|||+ + .|++.+......
T Consensus 88 ~~------------g~~D---~~~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~~~~~~~G~~~~~~~~~~~~~~ 152 (414)
T PRK12890 88 NG------------GRYD---GILGVLAGLEVVAALREAGIRPPHPLEVIAFTNEEGVRFGPSMIGSRALAGTLDVEAVL 152 (414)
T ss_pred CC------------CCcC---CHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEecccccccCCccccHHHHHcccChHHHH
Confidence 74 3222 277999999999999988877899999999999993 2 577655432110
Q ss_pred ------------------cccceeee-------------eccCCCC---CCceEEeecCcccCcceEEEEEEEeCCCCCC
Q 014490 189 ------------------ENVEAIFG-------------LHVSSLF---PVGTVASRPGPTLAAGGFFEAVINGKGGHAA 234 (423)
Q Consensus 189 ------------------~~~d~~i~-------------~~~~~~~---p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~ 234 (423)
...|.+.+ +|.+.+. +.+. ......+++|..|++|+++|+++|+|
T Consensus 153 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ep~~~~~~~~~h~~~g~~~~~~~~-~~~i~~~~kG~~~~~i~v~Gk~aHas 231 (414)
T PRK12890 153 ATRDDDGTTLAEALRRIGGDPDALPGALRPPGAVAAFLELHIEQGPVLEAEGL-PIGVVTAIQGIRRQAVTVEGEANHAG 231 (414)
T ss_pred hccCCCCCCHHHHHHHcCCChhhccccccCCCCccEEEEEeeCcCHHHHhCCC-ceEEEEeecCcEEEEEEEEEECCCCC
Confidence 01122111 1111100 0011 01223567899999999999999998
Q ss_pred C-CC-CCCcHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEecC-CCCccCCCcEEEEEEEecCChhhHHHHHHHHHHH
Q 014490 235 I-PQ-HTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGG-GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEV 311 (423)
Q Consensus 235 ~-p~-~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gg-~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~ 311 (423)
. |+ .+.|||..+++++.+|+++..+.. ...+++++.|++| ...|+||++|++.+|+|+.|+++.+++.++|+++
T Consensus 232 ~~P~~~g~nAI~~~~~~i~~l~~~~~~~~---~~~~~~~g~i~~gg~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~ 308 (414)
T PRK12890 232 TTPMDLRRDALVAAAELVTAMERRARALL---HDLVATVGRLDVEPNAINVVPGRVVFTLDLRSPDDAVLEAAEAALLAE 308 (414)
T ss_pred cCChhhccCHHHHHHHHHHHHHHHHHhcC---CCeEEEEEEEEECCCCceEECCeEEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 5 85 458999999999999998753322 3568999999975 7999999999999999999999999999999999
Q ss_pred HHHHHHhcCCeEEEEeeccCCCCccccCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhhcCeEEEEeccCCCC
Q 014490 312 VMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDET 391 (423)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~g~~~~~ 391 (423)
+++.+..++++++++. ...++++..++++++.+.+++++. |.++. ....+|+||+++|.+..|.+++ +|
T Consensus 309 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~~~~-g~~~~--~~~~~g~tDa~~~~~~gp~~~~-~g----- 377 (414)
T PRK12890 309 LEAIAAARGVRIELER--LSRSEPVPCDPALVDAVEAAAARL-GYPSR--RMPSGAGHDAAAIARIGPSAMI-FV----- 377 (414)
T ss_pred HHHHHHHhCCeEEEEE--eecCCCcCCCHHHHHHHHHHHHHc-CCCce--ecCCcccHHHHHHHhhCCEEEE-Ee-----
Confidence 9988877778887765 456777788899999999999885 87652 3467899999999988765544 34
Q ss_pred CCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 392 KGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 392 pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
||+...+|++||++++++|.+++++|+.++.
T Consensus 378 p~~~~~aHs~dE~v~i~~l~~~~~i~~~ll~ 408 (414)
T PRK12890 378 PCRGGISHNPEEAMDPEDLAAGARVLLDAVL 408 (414)
T ss_pred cCCCCCCCCcCccCCHHHHHHHHHHHHHHHH
Confidence 3334569999999999999999999999875
No 54
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family. Enzymes in this subfamily hydrolize the amide bonds of compounds containing carbamoyl groups or hydantoin rings. These enzymes are members of the broader family of amidases represented by pfam01546.
Probab=100.00 E-value=2.5e-42 Score=342.82 Aligned_cols=328 Identities=19% Similarity=0.201 Sum_probs=258.2
Q ss_pred CCCCCcHHHHHHHHHHHHhCCCCeEecccCceEEEEECCCC--CcEEEEEEecccccCcCCCCCcccCCCCCccccCCch
Q 014490 64 ELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQ--PPFVALRADMDALAMEESVEWEHKSKVPGKMHACGHD 141 (423)
Q Consensus 64 s~s~~E~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~~~--~~~ill~~H~Dtvp~~~~~~w~~~~~~~g~~~grG~k 141 (423)
|.+++|.++++||.++|+++|++++.+ ..+||+++++++. +|.|+|.||+||||.+ |+.+|+
T Consensus 25 ~~~~~e~~~~~~l~~~~~~~G~~~~~~-~~~nl~a~~~g~~~~~~~l~~~~H~DtV~~g------------g~~dg~--- 88 (401)
T TIGR01879 25 ALSPEDREAQDLFKKRMRAAGLEVRFD-EVGNLIGRKEGTEPPLEVVLSGSHIDTVVNG------------GNFDGQ--- 88 (401)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEEe-cCCcEEEEecCCCCCCCEEEEecccccCCCC------------CccCCH---
Confidence 446678999999999999999998764 4579999997543 4899999999999964 556664
Q ss_pred HHHHHHHHHHHHHHhccccCCceEEEEEecCCCC------cccHHHHHhcCCCc--------------------------
Q 014490 142 AHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEG------GGGAKKMLDAGALE-------------------------- 189 (423)
Q Consensus 142 ~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg------~~Ga~~~~~~~~~~-------------------------- 189 (423)
.|++++|.++++|++.+.+++++|.|+++++||+ +.|++.+.......
T Consensus 89 ~gvaa~l~a~~~l~~~g~~~~~~i~~~~~~dEE~~~f~~~~~Gs~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~ 168 (401)
T TIGR01879 89 LGVLAGIEVVDALKEAYVVPLHPIEVVAFTEEEGSRFPYGMWGSRNMVGLANPEDVRNICDAKGISFAEAMKACGPDLPN 168 (401)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCeEEEEEeCCcCcCcccccccHHHHhcccchhHHHhCcCCCCCCHHHHHHHcCCCccc
Confidence 4899999999999999988999999999999994 37888776422000
Q ss_pred -------ccceeeeeccCCC---CCCceEEeecCcccCcceEEEEEEEeCCCCCCC-CC-CCCcHHHHHHHHHHHHHHhh
Q 014490 190 -------NVEAIFGLHVSSL---FPVGTVASRPGPTLAAGGFFEAVINGKGGHAAI-PQ-HTIDPIVAASNVIVSLQHLV 257 (423)
Q Consensus 190 -------~~d~~i~~~~~~~---~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~-p~-~g~nAi~~~~~~i~~l~~~~ 257 (423)
+.++.+.+|.+.+ ++.|.. .....+++|..|++|+++|+++|++. |+ .+.|||..+++++..|+++.
T Consensus 169 ~~~~~~~~~~~~~e~Hieqg~~l~~~g~~-~~v~~~~~G~~~~~i~v~G~~aHa~~~p~~~g~nAi~~aa~~i~~l~~l~ 247 (401)
T TIGR01879 169 QPLRPRGDIKAYVELHIEQGPVLESNGQP-IGVVNAIAGQRWYKVTLNGESNHAGTTPMSLRRDPLVAASRIIHQVEEKA 247 (401)
T ss_pred ccccccccccEEEEEEEcCCcChhhCCCe-EEEEEEecCcEEEEEEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHH
Confidence 0112222332221 011111 12235678999999999999999985 53 57999999999999999875
Q ss_pred cccCCCCCCceEEEEEEecC-CCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCcc
Q 014490 258 SREADPLDSQVLTVAKFEGG-GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVT 336 (423)
Q Consensus 258 ~~~~~~~~~~t~~v~~i~gg-~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (423)
.+.. ...+.+++.|++| ...|+||++|++.+|+|+.|+++.+++.++|++++++.+..++.+++++. ...++++
T Consensus 248 ~~~~---~~~~~~vg~i~~g~~~~NvVP~~a~~~~diR~~p~~~~e~v~~~i~~~~~~~~~~~~~~~~~~~--~~~~~~~ 322 (401)
T TIGR01879 248 KRMG---DPTVGTVGKVEARPNGVNVIPGKVTFTLDLRHTDAAVLRDFTQQLENDIKAISDERDIGIDIER--WMDEEPV 322 (401)
T ss_pred HhcC---CCeEEEEEEEEecCCceEEECCEEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHcCceEEEEE--eecCCCc
Confidence 4322 2357899999985 67999999999999999999999999999999999988877788888776 4456778
Q ss_pred ccCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhhcCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHH
Q 014490 337 VNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAAL 416 (423)
Q Consensus 337 ~~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~ 416 (423)
..|+++++.++++++++ |.++. ...++|++|+++|.+..|..+ .+| ||+...+|++||+++++++.+++++
T Consensus 323 ~~d~~lv~~l~~a~~~~-g~~~~--~~~~~ggtDa~~~~~~~~~~v-~fg-----Pg~~~~aH~~dE~v~~e~l~~~~~v 393 (401)
T TIGR01879 323 PCSEELVAALTELCERL-GYNAR--VMVSGAGHDAQILAPIVPIGM-IFI-----PSINGISHNPAEWSNITDCAEGAKV 393 (401)
T ss_pred CCCHHHHHHHHHHHHHc-CCCcc--ccccchHHHHHHHHhhCCEEE-EEe-----cCCCCCcCCCCccCCHHHHHHHHHH
Confidence 88999999999999876 77653 346789999999998855333 245 4555678999999999999999999
Q ss_pred HHHHHh
Q 014490 417 HASLAT 422 (423)
Q Consensus 417 ~~~~i~ 422 (423)
|+.++.
T Consensus 394 l~~~i~ 399 (401)
T TIGR01879 394 LYLMVY 399 (401)
T ss_pred HHHHHH
Confidence 999885
No 55
>TIGR01887 dipeptidaselike dipeptidase, putative. This model represents a clade of probable zinc dipeptidases, closely related to the characterized non-specific dipeptidase, PepV. Many enzymes in this clade have been given names including the terms "Xaa-His" and "carnosinase" due to the early mis-characterization of the Lactobacillus delbrueckii PepV enzyme. These names are likely too specific.
Probab=100.00 E-value=3e-42 Score=344.94 Aligned_cols=344 Identities=13% Similarity=0.097 Sum_probs=251.0
Q ss_pred HHHHHHHHHhHhCCCCCCC------------cHHHHHHHHHHHHhCCCCeEecccCceEEEEEC-CCCCcEEEEEEeccc
Q 014490 50 YWMVNIRRKIHENPELGFQ------------EFETSKLIRAELDQMGIPYKFPVAVTGVVGYIG-TGQPPFVALRADMDA 116 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~~------------E~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~-~~~~~~ill~~H~Dt 116 (423)
+++++++++|++|||++.+ +.++++||.++|+++|++++.. .|+.+... ++..|+|+|+||+||
T Consensus 2 ~~~i~ll~~Lv~ipS~s~~~~p~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~---~~~~~~~~~~~~~~~l~l~gH~D~ 78 (447)
T TIGR01887 2 DEILEDLKELIRIDSVEDLEEAKEGAPFGEGPKKALDKFLELAKRDGFTTENV---DNYAGYAEYGQGEEYLGILGHLDV 78 (447)
T ss_pred hHHHHHHHHhcCcCcCCCCCCCCCCCCcchhHHHHHHHHHHHHHHcCceEEEe---cCceEEEEeCCCCCeEEEEeecCC
Confidence 5689999999999999832 3689999999999999998742 24444331 223489999999999
Q ss_pred ccCcCCCCCccc----CCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHhcCCC
Q 014490 117 LAMEESVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGAL 188 (423)
Q Consensus 117 vp~~~~~~w~~~----~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~~~~~~~ 188 (423)
||+++ .|.++ .++||++||||+ ||+++++|.|+++|++.+..++++|.|+|++||| |+.|+++++++...
T Consensus 79 Vp~~~--~W~~~Pf~~~~~~g~lyGRGa~D~KG~laa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~l~~~~~ 156 (447)
T TIGR01887 79 VPAGD--GWTSPPFEAEIKDGRIYGRGTLDDKGPTIAALYAMKILKELGLKLKKKIRFIFGTDEETGWACIDYYFEHEEA 156 (447)
T ss_pred CCCCC--CCcCCCCceEEECCEEEECCcccCcHHHHHHHHHHHHHHHcCCCCCCcEEEEEECCcccCcHhHHHHHHhcCC
Confidence 99875 68643 456899999998 8999999999999999888889999999999999 78899998876331
Q ss_pred cc----cc----eeeeec---------------------cCCCCCCceEE--eecCcccC-------------------c
Q 014490 189 EN----VE----AIFGLH---------------------VSSLFPVGTVA--SRPGPTLA-------------------A 218 (423)
Q Consensus 189 ~~----~d----~~i~~~---------------------~~~~~p~g~~~--~~~g~~~~-------------------g 218 (423)
.. .| ++++.. ...++|++.+. ....+.++ |
T Consensus 157 ~~~~~~~d~~~~~~~~e~g~~~~~~~v~g~~~~~~~i~~~~~Ge~tn~~p~~a~~~v~~~~~~~~~~~~~~~~~~~~~~g 236 (447)
T TIGR01887 157 PDIGFTPDAEFPIIYGEKGIVTLEISFKDDTEGDVVLESFKAGEAFNMVPDHATAVISGKELLEVEKEKFVFFIAKELEG 236 (447)
T ss_pred CCEEEeCCCCcceEEEecCeEEEEEEeccCCCCceeEEEEeCCCcCCccCcceEEEEeccchhHHHHHHHHHhhhcCcce
Confidence 10 11 121100 00133444320 00011112 4
Q ss_pred ce-----EEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHH--Hhhcc---------------------c-CCCCCCceE
Q 014490 219 GG-----FFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQ--HLVSR---------------------E-ADPLDSQVL 269 (423)
Q Consensus 219 ~~-----~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~--~~~~~---------------------~-~~~~~~~t~ 269 (423)
.. +++|+++|+++|+|.|+.|.|||+.|++++..+. +...+ . .+.++.+++
T Consensus 237 ~~~~~~~~~~i~v~G~~aHss~p~~G~NAi~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~t~ 316 (447)
T TIGR01887 237 SFEVNDGTATITLEGKSAHGSAPEKGINAATYLALFLAQLNLAGGAKAFLQFLAEYLHEDHYGEKLGIDFHDDVSGDLTM 316 (447)
T ss_pred EEEecCCEEEEEEEeeecccCCCccCccHHHHHHHHHHhccCchhHHHHHHHHHHhcCCCCccccCCCcccCCCcCCcEE
Confidence 44 7999999999999999999999999999999986 21100 0 011345789
Q ss_pred EEEEEecCCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCc-c-ccCHHHHHHHH
Q 014490 270 TVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPV-T-VNNKNLHEHFQ 347 (423)
Q Consensus 270 ~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~d~~~~~~l~ 347 (423)
|++.|++| +|+.|++.+|+|++|+++.+++.+++...+. +. .++.. ....+| + +.++++++.+.
T Consensus 317 nvg~I~~g-----~p~~~~~~~d~R~~p~~~~e~~~~~i~~~~~------~~-~~~~~--~~~~~p~~~~~~~~lv~~l~ 382 (447)
T TIGR01887 317 NVGVIDYE-----NAEAGLIGLNVRYPVGNDPDTMLKNELAKES------GI-VEVTE--NGYLKPLYVPKDDPLVQTLM 382 (447)
T ss_pred EEEEEEEe-----CCcEEEEEEEEecCCCCCHHHHHHHHHHHhh------Cc-EEEEE--ccCCCCeEECCCCHHHHHHH
Confidence 99999988 3899999999999999999977777664332 21 22222 111222 2 45689999999
Q ss_pred HHHHHhcCCcccccCCCCCCCchHHHHHhhcCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHH
Q 014490 348 KVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLA 421 (423)
Q Consensus 348 ~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i 421 (423)
+++++++|.++ .....+|+||+..+. . .+.+|+.. ||+..++|++||++++++|..++++|..++
T Consensus 383 ~~~~~~~g~~~--~~~~~~ggtda~~~~----~-~i~~Gp~~--pG~~~~aH~~dE~v~i~~l~~~~~i~~~~~ 447 (447)
T TIGR01887 383 KVYEKQTGDEG--TPVAIGGGTYARLME----N-GVAFGALF--PGEEDTMHQANEYIMIDDLLLATAIYAEAI 447 (447)
T ss_pred HHHHHHhCCCC--CeeEecchhhhhhCC----C-cEEeCCCC--CCCCCCccCCCcceeHHHHHHHHHHHHHhC
Confidence 99999988765 334567788877643 2 24567666 788888999999999999999999998764
No 56
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=100.00 E-value=1.1e-41 Score=344.96 Aligned_cols=346 Identities=18% Similarity=0.167 Sum_probs=257.3
Q ss_pred HHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEecccCceEEEEECCC----CCcEEEEEEecccccCcCC---
Q 014490 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG----QPPFVALRADMDALAMEES--- 122 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~~----~~~~ill~~H~Dtvp~~~~--- 122 (423)
+++++++++|++|||+|++|.++++||.++|+++|++++.+ ...|+++++++. ..|+|+|.||+||||.+..
T Consensus 4 ~~~~~~l~~l~~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~-~~~n~~~~~~~~~g~~~~~~l~l~~HlDtV~~~~~~~~ 82 (477)
T TIGR01893 4 SRVFKYFEEISKIPRPSKNEKEVSNFIVNWAKKLGLEVKQD-EVGNVLIRKPATPGYENHPPIVLQGHMDMVCEKNEDSL 82 (477)
T ss_pred HHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHcCCeEEEe-CCCeEEEEEcCCCCCCCCCeEEEEeeccccCCCCCCCC
Confidence 67889999999999999999999999999999999998764 357999998532 2489999999999998753
Q ss_pred CCCccc----CCCCCccccCCc------hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHhcCCCccc
Q 014490 123 VEWEHK----SKVPGKMHACGH------DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENV 191 (423)
Q Consensus 123 ~~w~~~----~~~~g~~~grG~------k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~~~~~~~~~~ 191 (423)
..|..+ ..+||++||||+ |++++++|.+++. .+ .++++|.++|++||| |+.|++.+..+.. ..
T Consensus 83 ~~w~~~p~~~~~~~~~i~GrG~~lg~D~k~gva~~l~~~~~---~~-~~~~~i~~~~~~dEE~g~~Gs~~l~~~~~--~~ 156 (477)
T TIGR01893 83 HDFEKDPIELIIDGDWLKARGTTLGADNGIGVAMGLAILED---NN-LKHPPLELLFTVDEETGMDGALGLDENWL--SG 156 (477)
T ss_pred CCCCCCCeEEEEeCCEEEECCccccccccHHHHHHHHHHhc---CC-CCCCCEEEEEEeccccCchhhhhcChhhc--CC
Confidence 357543 357899999995 6888888887764 23 356799999999999 7789999965432 22
Q ss_pred ceeeeeccCC------CCCCceE---Ee--ecCcccCcceEEEEEEEe-CCCCCC-CCCCCC-cHHHHHHHHHHHHHHhh
Q 014490 192 EAIFGLHVSS------LFPVGTV---AS--RPGPTLAAGGFFEAVING-KGGHAA-IPQHTI-DPIVAASNVIVSLQHLV 257 (423)
Q Consensus 192 d~~i~~~~~~------~~p~g~~---~~--~~g~~~~g~~~~~i~v~G-~~~Hs~-~p~~g~-nAi~~~~~~i~~l~~~~ 257 (423)
++++..+... +++.+.. .+ .....++|..+++|+++| +++||| .|+.+. ||+..++++|..++...
T Consensus 157 ~~~~~~d~~~~~~~~~g~~~~~~~~~~~e~~~e~~~kG~~~~~i~~~G~~~~Hsg~~p~~~r~nAi~~aa~~i~~l~~~~ 236 (477)
T TIGR01893 157 KILINIDSEEEGEFIVGCAGGRNVDITFPVKYEKFTKNEEGYQISLKGLKGGHSGADIHKGRANANKLMARVLNELKENL 236 (477)
T ss_pred cEEEEecCCCCCeEEEECCCCeeEEEEEEEEEEecCCCceEEEEEEeCcCCCcCccccCCCCcCHHHHHHHHHHhhhhcC
Confidence 3444332100 1111110 00 000114789999999999 999998 588885 99999999999987752
Q ss_pred cccCCCCCCceEEEEEEecCCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHh--cC---------------
Q 014490 258 SREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASV--QR--------------- 320 (423)
Q Consensus 258 ~~~~~~~~~~t~~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~--~~--------------- 320 (423)
..+++.+.||...|+||++|++.+|+|.......+.+.+.+.+.++..+.+ .+
T Consensus 237 ----------~~~v~~~~gg~~~N~ip~~~~~~~diR~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (477)
T TIGR01893 237 ----------NFRLSDIKGGSKRNAIPREAKALIAIDENDVKLLENLVKNFQSKFKSEYSELEPNITIEVSKRENSVKVF 306 (477)
T ss_pred ----------CeEEEEEeCCCcccccCCceEEEEEEChhHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEECCCccccc
Confidence 367889999999999999999999998766666666666555555443311 01
Q ss_pred -------------------------------------------------------------------------CeEEEEe
Q 014490 321 -------------------------------------------------------------------------CNATVTF 327 (423)
Q Consensus 321 -------------------------------------------------------------------------~~~~~~~ 327 (423)
..++++.
T Consensus 307 d~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~t~n~g~i~~~~~~~~~~i~~R~~~~~~~~~i~~~i~~~~~~~~~~v~~ 386 (477)
T TIGR01893 307 SENTTDKLINALNGLPNGVQSVSDEEPGLVESSLNLGVVKTKENKVIFTFLIRSSVESDKDYVTEKIESIAKLAGARVEV 386 (477)
T ss_pred CHHHHHHHHHHHHHCCccceeeccCCCCeEEeeeeEEEEEEcCCEEEEEEEeCCCCchhHHHHHHHHHHHhhhcCeEEEE
Confidence 1123332
Q ss_pred eccCCCCcc--ccCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhhcCeE-EEEeccCCCCCCCCCCCCCCCcc
Q 014490 328 DDKSFYPVT--VNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGY-FYYLGMNDETKGKFETGHSPYFR 404 (423)
Q Consensus 328 ~~~~~~~~~--~~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~-~~~~g~~~~~pg~~~~~H~~~E~ 404 (423)
...++++ +.|+++++.+.+++++.+|.++. ....+|++|++.|.+..|.+ ++++|+ ++ .++|++||+
T Consensus 387 --~~~~~p~~~~~d~plv~~l~~a~~~~~g~~~~--~~~~~Ggtd~~~~~~~~~~i~~v~~Gp-----~~-~~~H~~nE~ 456 (477)
T TIGR01893 387 --SAGYPSWQPDPQSNLLDTARKVYSEMFGEDPE--VKVIHAGLECGIISSKIPDIDMISIGP-----NI-YDPHSPNER 456 (477)
T ss_pred --ecCCCcccCCCCCHHHHHHHHHHHHHHCCCCe--EEEeecCccHHHHHhhCCCceEEEeCC-----CC-CCCCCCCce
Confidence 2344444 45789999999999999998663 34788999999998865543 456774 33 469999999
Q ss_pred CCCCchHHHHHHHHHHHh
Q 014490 405 VNEDALPYGAALHASLAT 422 (423)
Q Consensus 405 i~~~~l~~~~~~~~~~i~ 422 (423)
+++++|.+++++|++++.
T Consensus 457 i~i~~l~~~~~~~~~ll~ 474 (477)
T TIGR01893 457 VSISSVEKVWDFLVKVLE 474 (477)
T ss_pred eeHHHHHHHHHHHHHHHH
Confidence 999999999999999875
No 57
>KOG2275 consensus Aminoacylase ACY1 and related metalloexopeptidases [Amino acid transport and metabolism]
Probab=100.00 E-value=9.4e-42 Score=319.38 Aligned_cols=357 Identities=17% Similarity=0.178 Sum_probs=280.7
Q ss_pred HHHHHHHHHhHhCCCCCCCc--H-HHHHHHHHHHHhCCCCeEe---cccCceEEEEECCCC--CcEEEEEEecccccCcC
Q 014490 50 YWMVNIRRKIHENPELGFQE--F-ETSKLIRAELDQMGIPYKF---PVAVTGVVGYIGTGQ--PPFVALRADMDALAMEE 121 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~~E--~-~~~~~l~~~l~~~g~~~~~---~~~~~nvia~~~~~~--~~~ill~~H~Dtvp~~~ 121 (423)
...+..+++.++||++-.+- . ++++|+.++.+.+|+.++. ....++++.+|.|++ -+.|+|++|+||||+..
T Consensus 25 ~~~v~~f~eylRi~Tv~p~~dy~~a~~~Fl~~~a~~l~l~~~~i~~~p~~~~~l~T~~GS~P~L~silL~SH~DVVP~f~ 104 (420)
T KOG2275|consen 25 NISVTRFREYLRIPTVQPNPDYTIACADFLKKYAKSLGLTVQKIESEPGKYVLLYTWLGSDPELPSILLNSHTDVVPVFR 104 (420)
T ss_pred chHHHHHHHHhhccccccCCCccHHHHHHHHHHHHhcCCceeEEEecCceeEEEEEeeCCCCCccceeeeccccccCCCc
Confidence 55778899999999997653 4 7899999999999998755 455888999997654 38999999999999875
Q ss_pred CCCCcccC-----CCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC--CcccHHHHHhcCCCccc
Q 014490 122 SVEWEHKS-----KVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE--GGGGAKKMLDAGALENV 191 (423)
Q Consensus 122 ~~~w~~~~-----~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE--g~~Ga~~~~~~~~~~~~ 191 (423)
+.|.++. .++|.|||||+ |+-.+++|+|++.|+..+.+++++|.+.|.+||| |..|++.+.+.-.+++.
T Consensus 105 -e~W~h~Pfsa~~~~~g~IyaRGaqD~K~~~va~leAir~L~~~g~kp~Rti~lsfvpDEEi~G~~Gm~~fa~~~~~~~l 183 (420)
T KOG2275|consen 105 -EKWTHPPFSAFKDEDGNIYARGAQDMKCVGVAYLEAIRNLKASGFKPKRTIHLSFVPDEEIGGHIGMKEFAKTEEFKKL 183 (420)
T ss_pred -ccCccCCccccccCCCcEEeccccchHhHHHHHHHHHHHHHhcCCCcCceEEEEecCchhccCcchHHHHhhhhhhccc
Confidence 4898762 46799999998 8999999999999999999999999999999999 46899999875555555
Q ss_pred ceeeeeccCCCCCCceEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhccc---------CC
Q 014490 192 EAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSRE---------AD 262 (423)
Q Consensus 192 d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~---------~~ 262 (423)
...++++. +.++-.-..+.+++++|.+|++|++.|.++|+|.|.. ..|+..+.++|.++.+..... ..
T Consensus 184 ~~~filDE--G~~se~d~~~vfyaEkg~w~~~v~~~G~~GHss~~~~-nTa~~~l~klv~~~~~fr~~q~~~l~~~p~~~ 260 (420)
T KOG2275|consen 184 NLGFILDE--GGATENDFATVFYAEKGPWWLKVTANGTPGHSSYPPP-NTAIEKLEKLVESLEEFREKQVDLLASGPKLA 260 (420)
T ss_pred ceeEEecC--CCCCcccceeEEEEeeceeEEEEEecCCCCCCCCCCC-ccHHHHHHHHHHHHHHhHHHHHHHhhcCCcee
Confidence 55555543 2223222256788999999999999999999997422 467788888888877664211 11
Q ss_pred CCCCceEEEEEEecCCCCccCCCcEEEEEEEecCChhhHHHHHHHH-HHHHHHHHHhcCCeEEEEeecc--CCCCcc---
Q 014490 263 PLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRI-EEVVMKQASVQRCNATVTFDDK--SFYPVT--- 336 (423)
Q Consensus 263 ~~~~~t~~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--- 336 (423)
..+.+|+|++.|+||...|++|.+.++.+|+|+.|..+.+++.+++ +++.++ ++-.++++.... .++++.
T Consensus 261 ~~~vtT~Nv~~i~GGv~~N~~P~~~ea~~dirv~~~~d~~~i~~~l~~~w~~~----~~eg~t~~f~~~~~~~~~~~t~~ 336 (420)
T KOG2275|consen 261 LGDVTTINVGIINGGVQSNVLPETFEAAFDIRVRPHVDVKAIRDQLEDEWAEE----AGEGVTLEFSQKVILDYPPVTPT 336 (420)
T ss_pred ccceeEEeeeeeecccccCcCchhheeeeeeEeccCCCHHHHHHHHHHHhhhh----cCCceEEeccCcccCCCCCCCCC
Confidence 2457899999999999999999999999999999999999999999 555543 344445444211 133332
Q ss_pred ccCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhh-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHH
Q 014490 337 VNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAA 415 (423)
Q Consensus 337 ~~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~ 415 (423)
..+.+++..+..++++. |.+. .+...+|+||..++++. +|..-+. ++.+. ....|..||+++.+.+.++++
T Consensus 337 ~~s~p~w~~~~~a~~~~-~~k~--~~~i~~gstdsr~~rn~gvp~~~fs-p~~nt----~~~~H~hnE~l~~~~~l~gi~ 408 (420)
T KOG2275|consen 337 DDSNPFWTAFAGALKDE-GGKG--YPEIGPGSTDSRHIRNEGVPAIGFS-PIINT----PMLLHDHNEFLNEKVFLRGIE 408 (420)
T ss_pred CCCChHHHHHHHHHHHh-cCcc--ceeecccccccchhhhcCcchhccc-ccccc----cceecchhhhhCchhhhhhhh
Confidence 33468999999999998 5555 34688999999999999 8865553 33333 468999999999999999999
Q ss_pred HHHHHHh
Q 014490 416 LHASLAT 422 (423)
Q Consensus 416 ~~~~~i~ 422 (423)
+|..+|.
T Consensus 409 ~~~~~i~ 415 (420)
T KOG2275|consen 409 IYYTIIV 415 (420)
T ss_pred HHHHHHH
Confidence 9999875
No 58
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=100.00 E-value=7.8e-41 Score=336.46 Aligned_cols=341 Identities=16% Similarity=0.165 Sum_probs=258.0
Q ss_pred HHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEecccCceEEEEECC--C--CCcEEEEEEecccccCcCC---
Q 014490 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGT--G--QPPFVALRADMDALAMEES--- 122 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~--~--~~~~ill~~H~Dtvp~~~~--- 122 (423)
+++++++++|++|||+|++|.++++||.++++++|++++.+ ...|+++++.+ + ..|.|+|.|||||||+++.
T Consensus 10 ~~~~~~l~~Lv~ips~S~~e~~~~~~l~~~~~~~G~~~~~d-~~gnvi~~~~~~~g~~~~~~v~l~gH~DtV~~~~~~~~ 88 (485)
T PRK15026 10 QPLWDIFAKICSIPHPSYHEEQLAEYIVGWAKEKGFHVERD-QVGNILIRKPATAGMENRKPVVLQAHLDMVPQKNNDTV 88 (485)
T ss_pred HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHhCCCEEEEE-ecCeEEEEEcCCCCCCCCCEEEEEeeecccCCCCCCcc
Confidence 67899999999999999999999999999999999998764 45699988742 2 2489999999999998753
Q ss_pred CCCc---cc-CCCCCccccCCc------hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHhcCCCccc
Q 014490 123 VEWE---HK-SKVPGKMHACGH------DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENV 191 (423)
Q Consensus 123 ~~w~---~~-~~~~g~~~grG~------k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~~~~~~~~~~ 191 (423)
.+|. |. .++||++||||+ |++++++|.++ ++.+. .+++|.++|++||| |+.|++.+.. .. ...
T Consensus 89 ~~w~~~P~~~~i~~~~l~g~Gt~lgaD~k~gva~~l~~l---~~~~~-~~~~i~~l~t~dEE~G~~ga~~l~~-~~-~~~ 162 (485)
T PRK15026 89 HDFTKDPIQPYIDGEWVKARGTTLGADNGIGMASALAVL---ADENV-VHGPLEVLLTMTEEAGMDGAFGLQS-NW-LQA 162 (485)
T ss_pred ccCCCCCceEEEcCCEEEeCCccccCccHHHHHHHHHHH---HhCCC-CCCCEEEEEEcccccCcHhHHHhhh-cc-CCc
Confidence 2574 43 357899999996 57888877665 44443 47899999999999 8899999854 33 356
Q ss_pred ceeeeeccCCCCCCceE--EeecCc------------ccCcceEEEEEEEe-CCCCCC-CCCCCC-cHHHHHHHHHHHHH
Q 014490 192 EAIFGLHVSSLFPVGTV--ASRPGP------------TLAAGGFFEAVING-KGGHAA-IPQHTI-DPIVAASNVIVSLQ 254 (423)
Q Consensus 192 d~~i~~~~~~~~p~g~~--~~~~g~------------~~~g~~~~~i~v~G-~~~Hs~-~p~~g~-nAi~~~~~~i~~l~ 254 (423)
++++.+++ . ..|.+ ++..|. ..+|..+++|+|+| +++||+ .|+.|+ |||..|+++|.++.
T Consensus 163 ~~~i~~e~--~-~~g~l~~g~~G~~~~~~~~~~~r~~~~~g~~~~~i~v~Gl~ggHsG~~i~~g~~nAi~~la~~l~~~~ 239 (485)
T PRK15026 163 DILINTDS--E-EEGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGGEIHVGLGNANKLLVRFLAGHA 239 (485)
T ss_pred CEEEEeCC--C-CCCeEEEeCCCcceEEEEEEEEEEecCCCceEEEEEEECCCCcCChHHHCCCCccHHHHHHHHHHHhH
Confidence 78887653 2 23433 222111 12577899999999 999999 699999 99999999999854
Q ss_pred HhhcccCCCCCCceEEEEEEecCCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHH---------------------
Q 014490 255 HLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVM--------------------- 313 (423)
Q Consensus 255 ~~~~~~~~~~~~~t~~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~--------------------- 313 (423)
. ..+++++.|+||...|+||++|++.+++|....+..+.+.+.+++.++
T Consensus 240 ~----------~~~~~v~~i~GG~~~NaIp~~a~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (485)
T PRK15026 240 E----------ELDLRLIDFNGGTLRNAIPREAFATIAVAADKVDALKSLVNTYQEILKNELAEKEKNLALLLDSVANDK 309 (485)
T ss_pred h----------hCCeEEEEEeCCCccCCCCCCcEEEEEEChhHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEEccccc
Confidence 2 258999999999999999999999999997665555444444433331
Q ss_pred -----------------------------------------------------------------------HHHHhcCCe
Q 014490 314 -----------------------------------------------------------------------KQASVQRCN 322 (423)
Q Consensus 314 -----------------------------------------------------------------------~~~~~~~~~ 322 (423)
..+..++.+
T Consensus 310 ~~~~~~~~~~~~~~l~~~~~Gv~~~s~~~~g~v~~S~Nlg~v~~~~~~~~i~~~~Rs~~~~~~~~i~~~i~~~~~~~g~~ 389 (485)
T PRK15026 310 AALIAKSRDTFIRLLNATPNGVIRNSDVAKGVVETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGAK 389 (485)
T ss_pred cccCHHHHHHHHHHHHHCCcccEEeccCCCCeEEeeeEEEEEEEeCCEEEEEEEecCCCchHHHHHHHHHHHHHHHcCcE
Confidence 112222222
Q ss_pred EEEEeeccCCCCccc--cCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhhcCeE-EEEeccCCCCCCCCCCCC
Q 014490 323 ATVTFDDKSFYPVTV--NNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGY-FYYLGMNDETKGKFETGH 399 (423)
Q Consensus 323 ~~~~~~~~~~~~~~~--~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~-~~~~g~~~~~pg~~~~~H 399 (423)
++ . ...+|+|. .|+++++.+.+++++++|.++ .+....|++|.+.|.+..|.+ ++.+||... .+|
T Consensus 390 ~~--~--~~~~p~w~~~~ds~lv~~l~~~y~e~~G~~~--~~~~ihaglEcG~~~~~~p~i~~VsfGP~~~------~~H 457 (485)
T PRK15026 390 TE--A--KGAYPGWQPDANSPVMHLVRETYQRLFNKTP--NIQIIHAGLECGLFKKPYPEMDMVSIGPTIT------GPH 457 (485)
T ss_pred EE--E--eCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC--eEEEEEEEehHHHHHhhCCCCCEEEECCCCC------CCC
Confidence 22 2 33577764 458999999999999999876 345788999999999775542 445675542 389
Q ss_pred CCCccCCCCchHHHHHHHHHHHh
Q 014490 400 SPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 400 ~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
++||+++++++.+.++++..++.
T Consensus 458 spdE~v~I~s~~~~~~~l~~~l~ 480 (485)
T PRK15026 458 SPDEQVHIESVGHYWTLLTELLK 480 (485)
T ss_pred CCCcEEEhHHHHHHHHHHHHHHH
Confidence 99999999999988888777764
No 59
>TIGR03176 AllC allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea.
Probab=100.00 E-value=1e-39 Score=323.54 Aligned_cols=342 Identities=15% Similarity=0.144 Sum_probs=264.4
Q ss_pred HHHHHHHHHhHhC-CCC---------CCCcHHHHHHHHHHHHhCCCCeEecccCceEEEEECCCC--CcEEEEEEecccc
Q 014490 50 YWMVNIRRKIHEN-PEL---------GFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQ--PPFVALRADMDAL 117 (423)
Q Consensus 50 ~~~~~~~~~l~~i-ps~---------s~~E~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~~~--~~~ill~~H~Dtv 117 (423)
.++++.+.+|-+| ..+ |.++.++++|+.++|+++|++++.+ ...|+++++++.. .|+|++.+|||||
T Consensus 3 ~~~~~~~~~~~~~~~~~~~g~~R~~~s~~~~~a~~~~~~~~~~~Gl~v~~D-~~gN~~~~~~g~~~~~~~i~~gsHlDtv 81 (406)
T TIGR03176 3 KHFRQAIEELSSFGADPAGGMTRLLYSPEWLAAQQQFKKRMAESGLETRFD-DVGNLYGRLVGTEFPEETILTGSHIDTV 81 (406)
T ss_pred HHHHHHHHHHhccCCCCCCceEeeeCCHHHHHHHHHHHHHHHHcCCEEEEc-CCCcEEEEecCCCCCCCeEEEeccccCC
Confidence 3455556666665 222 2346889999999999999998765 4579999997653 4899999999999
Q ss_pred cCcCCCCCcccCCCCCccccCCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCC------cccHHHHHh-------
Q 014490 118 AMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEG------GGGAKKMLD------- 184 (423)
Q Consensus 118 p~~~~~~w~~~~~~~g~~~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg------~~Ga~~~~~------- 184 (423)
|.+ |+.-| ..|+++.|++++.|++.+..++++|.+++..+||| +.|++.+..
T Consensus 82 ~~g------------G~~dg---~~Gv~~~le~~~~l~~~~~~~~~~i~vi~~~~EEg~rf~~~~~Gs~~~~g~~~~~~~ 146 (406)
T TIGR03176 82 VNG------------GNLDG---QFGALAAWLAVDYLKEKYGAPLRTVEVLSMAEEEGSRFPYVFWGSKNIFGLAKPEDV 146 (406)
T ss_pred CCC------------CccCc---hhhHHHHHHHHHHHHHcCCCCCCCeEEEEeccccCccCCcccccHHHHhCCCCHHHH
Confidence 965 33322 46899999999999999989999999999999995 567776652
Q ss_pred -----------------cCC--------CcccceeeeeccCCCC--C-CceEEeecCcccCcceEEEEEEEeCCCCCCCC
Q 014490 185 -----------------AGA--------LENVEAIFGLHVSSLF--P-VGTVASRPGPTLAAGGFFEAVINGKGGHAAIP 236 (423)
Q Consensus 185 -----------------~~~--------~~~~d~~i~~~~~~~~--p-~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p 236 (423)
.|+ ..++++.+.+|.+.+. + .|.. .....+.+|..+++|+|+|+++|+|.+
T Consensus 147 ~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~elHieqG~~Le~~g~~-igiv~~~~G~~~~~v~v~GkaaHag~~ 225 (406)
T TIGR03176 147 RTIEDAKGIKFVDAMHACGFDLRKAPTVRDDIKAFVELHIEQGCVLESEGQS-IGVVNAIVGQRRYTVNLKGEANHAGTT 225 (406)
T ss_pred HhCcCCCCCCHHHHHHHcCCCcccccccccccceEEEEEECCCcchHHCCCe-EEEEeecccceEEEEEEEEECCCCCCC
Confidence 010 0134566777775431 1 1211 112245679999999999999999975
Q ss_pred CC--CCcHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEe-cCCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHH
Q 014490 237 QH--TIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFE-GGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVM 313 (423)
Q Consensus 237 ~~--g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~-gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~ 313 (423)
.. +.||+..+++++..+.+...+. ....+++++.|+ +|...|+||++|++.+|+|.+|.++.+.+.+++++.++
T Consensus 226 p~~~r~dAi~aaa~~i~~l~~~~~~~---~~~~~~tvG~I~~gg~~~NvIP~~a~~~~DiR~~~~~~~e~v~~~i~~~i~ 302 (406)
T TIGR03176 226 PMSYRRDTVYAFSRICTQSIERAKEI---GDPLVLTFGKVEPVPNTVNVVPGETTFTIDCRHTDAAVLRNFTKELENDMK 302 (406)
T ss_pred CcccccCHHHHHHHHHHHHHHHHHhc---CCCcEEEEEEEEEcCCceEEECCeEEEEEEeeCCCHHHHHHHHHHHHHHHH
Confidence 54 4899999999999998864322 234689999999 47889999999999999999999999999999999999
Q ss_pred HHHHhcCCeEEEEeeccCCCCccccCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhhcCeEEEEeccCCCCCC
Q 014490 314 KQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKG 393 (423)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~g~~~~~pg 393 (423)
+.+..++++++++. ....+|...|+++++.+++++++. +.++ .....+|++|+++|.+.+|+++++.|.
T Consensus 303 ~ia~~~g~~~ei~~--~~~~~p~~~d~~lv~~l~~a~~~~-~~~~--~~~~sggg~Da~~~~~~vP~~~ifgp~------ 371 (406)
T TIGR03176 303 AIADEMDITIDIDL--WMDEAPVPMNKEIVAIIEQLAKAE-KLNY--RLMHSGAGHDAQIFAPRVPTAMIFVPS------ 371 (406)
T ss_pred HHHHHcCCeEEEEE--EecCCCCCCCHHHHHHHHHHHHHc-CCCc--eecCcccHHHHHHHHHHCCEEEEEEeC------
Confidence 99988888888765 223344566789999999999987 4433 234678999999999889986643332
Q ss_pred CCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 394 KFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 394 ~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
.....|++||+++++++.+++++|+.++.
T Consensus 372 ~~g~~H~p~E~v~~e~l~~g~~vl~~~l~ 400 (406)
T TIGR03176 372 IGGISHNPAERTNIEDLVEGVKTLADMLY 400 (406)
T ss_pred CCCCCCCccccCCHHHHHHHHHHHHHHHH
Confidence 22358999999999999999999999875
No 60
>PRK08554 peptidase; Reviewed
Probab=100.00 E-value=1e-40 Score=333.36 Aligned_cols=352 Identities=20% Similarity=0.225 Sum_probs=247.4
Q ss_pred HHHHHHHHhHhCCCCCCC------cHHHHHHHHHHHHhCCCCeEec--ccCceEEEEECCCCCcEEEEEEecccccCcCC
Q 014490 51 WMVNIRRKIHENPELGFQ------EFETSKLIRAELDQMGIPYKFP--VAVTGVVGYIGTGQPPFVALRADMDALAMEES 122 (423)
Q Consensus 51 ~~~~~~~~l~~ips~s~~------E~~~~~~l~~~l~~~g~~~~~~--~~~~nvia~~~~~~~~~ill~~H~Dtvp~~~~ 122 (423)
++++++++|++|||+++. +.++++|+.++|+++|++++.. ..++|+++.++.+ .++|+|.||+||||+++
T Consensus 2 ~~~~~l~~LV~i~S~~~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~l~~~~~~~-~~~l~l~gH~DtVp~~~- 79 (438)
T PRK08554 2 DVLELLSSLVSFETVNDPSKGIKPSKECPKFIKDTLESWGIESELIEKDGYYAVYGEIGEG-KPKLLFMAHFDVVPVNP- 79 (438)
T ss_pred hHHHHHHHHhCCCCCCCcccCcchHHHHHHHHHHHHHHCCCeEEEEecCCceEEEEEeCCC-CCEEEEEeccccCCCCc-
Confidence 468889999999998753 4789999999999999998652 2457999998543 48899999999999875
Q ss_pred CCCcc---c-CCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHhcCC--Ccccc
Q 014490 123 VEWEH---K-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGA--LENVE 192 (423)
Q Consensus 123 ~~w~~---~-~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~~~~~~--~~~~d 192 (423)
..|.+ . .++||++||||+ ||+++++|+|+++|++.+ ++++|.|+|++||| |+.++.++++... ....+
T Consensus 80 ~~w~~~Pf~~~~~~g~lyGrG~~DmKgg~aa~l~A~~~l~~~~--~~~~i~l~~~~dEE~g~~~~~~~~~~~~~~~~~~~ 157 (438)
T PRK08554 80 EEWNTEPFKLTVKGDKAYGRGSADDKGNVASVMLALKELSKEP--LNGKVIFAFTGDEEIGGAMAMHIAEKLREEGKLPK 157 (438)
T ss_pred cccccCCceeEEECCEEEECCcccchHHHHHHHHHHHHHHhcC--CCCCEEEEEEcccccCccccHHHHHHHHhcCCCCC
Confidence 35754 3 367899999996 899999999999998743 67899999999999 6655556554311 12457
Q ss_pred eeeeeccCCCCCCceEEeecCcc-----------cCcc---eEEEEEEEeCC-CCCCCCCCCCc--HHHHHHHHHHHHHH
Q 014490 193 AIFGLHVSSLFPVGTVASRPGPT-----------LAAG---GFFEAVINGKG-GHAAIPQHTID--PIVAASNVIVSLQH 255 (423)
Q Consensus 193 ~~i~~~~~~~~p~g~~~~~~g~~-----------~~g~---~~~~i~v~G~~-~Hs~~p~~g~n--Ai~~~~~~i~~l~~ 255 (423)
++|+.++....+ .+..+.|.. -.|. .++.+++.|.+ +|++.+..|.| ++..+++++.++..
T Consensus 158 ~~iv~Ept~~~~--~~~~~kg~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~Ha~~~~~g~~~~~i~~~~~~~~~~~~ 235 (438)
T PRK08554 158 YMINADGIGMKP--IIRRRKGFGVTIRVPSEKVKVKGKLREQTFEIRTPVVETRHAAYFLPGVDTHPLIAASHFLRESNV 235 (438)
T ss_pred EEEEeCCCCCcc--hhhcCCceEEEEEecccccccccceeeeeeceeecccCccccccccCCcCchHHHHHHHHHhhcCc
Confidence 777643311111 101111100 0122 34445555654 99997766665 58888888777654
Q ss_pred hhccc----C--C-CCCCceEEEEEEecCC-----------------------------------CCccC---CCcEEEE
Q 014490 256 LVSRE----A--D-PLDSQVLTVAKFEGGG-----------------------------------AFNII---PDSVTIG 290 (423)
Q Consensus 256 ~~~~~----~--~-~~~~~t~~v~~i~gg~-----------------------------------~~n~i---P~~a~~~ 290 (423)
+.... . + .....++++...++|. ..|++ |++|+++
T Consensus 236 ~~~~~~g~~~~~~~~~~~~~~~~~~p~~g~n~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~n~~~i~~g~a~~~ 315 (438)
T PRK08554 236 LAVSLEGKFLKGNVVPGEVTLTYLEPGEGEEVEVDLGLTRLLKAIVPLVRAPIKAEKYSDYGVSITPNVYSFAEGKHVLK 315 (438)
T ss_pred eEEEEeeeeeecCcccceeEEEEecCCCCccccccccHHHHHHHHHHHHHHhhccccccccceeeccceEEecCCeEEEE
Confidence 32100 0 0 1112233333333343 45666 9999999
Q ss_pred EEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCccccCHHHHHHHHHHHHHhcCCcccccCCCCCCCch
Q 014490 291 GTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTED 370 (423)
Q Consensus 291 ~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD 370 (423)
+|+|+.| .+.+++.++|++.+++.. .+++++++.....+...++.++++++.+++++++. |.++ .+...+|+||
T Consensus 316 ~DiR~~~-~~~e~v~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~~~~-g~~~--~~~~~~GgtD 389 (438)
T PRK08554 316 LDIRAMS-YSKEDIERTLKEVLEFNL--PEAEVEIRTNEKAGYLFTPPDEEIVKVALRVLKEL-GEDA--EPVEGPGASD 389 (438)
T ss_pred EEEEecC-CCHHHHHHHHHHHhhccC--CCceEEEEeccCCCCcCCCCChHHHHHHHHHHHHh-CCCc--EEEecCCchH
Confidence 9999988 688999999998886532 24556655421234445567899999999999885 8766 4457889999
Q ss_pred HHHHHhh-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 371 FSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 371 ~~~~~~~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
+++|... +|++.+ |+.. ..+|++|||+++++|.+++++|..++.
T Consensus 390 a~~~~~~Gip~v~~--Gp~~------~~~H~~~E~v~i~~l~~~~~i~~~~i~ 434 (438)
T PRK08554 390 SRYFTPYGVKAIDF--GPKG------GNIHGPNEYVEIDSLKKMPEVYKRIAL 434 (438)
T ss_pred HHHHHhcCCCceEE--CCCC------CCCCCCcceEEHHHHHHHHHHHHHHHH
Confidence 9999877 998775 5322 359999999999999999999999875
No 61
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional
Probab=100.00 E-value=6e-39 Score=330.49 Aligned_cols=345 Identities=15% Similarity=0.157 Sum_probs=272.1
Q ss_pred hHHHHHHHHHHhHhCCCC-------------CCCcHHHHHHHHHHHHhCCCC-eEecccCceEEEEECCC--CCcEEEEE
Q 014490 48 IFYWMVNIRRKIHENPEL-------------GFQEFETSKLIRAELDQMGIP-YKFPVAVTGVVGYIGTG--QPPFVALR 111 (423)
Q Consensus 48 ~~~~~~~~~~~l~~ips~-------------s~~E~~~~~~l~~~l~~~g~~-~~~~~~~~nvia~~~~~--~~~~ill~ 111 (423)
+.+++++.+..|.+|+.+ |.++.++++|+.+||+++|++ ++.+ .-+||++++++. ++|+|++.
T Consensus 179 ~~~r~~~~l~~l~~~~~~~~~~~~g~~R~~~s~~~~~~~~~~~~~~~~~Gl~~v~~D-~~gNv~~~~~g~~~~~p~v~~g 257 (591)
T PRK13799 179 IGADVMDWAEDIAAHSDPGYADEGALTCTYLSDAHRACANQISDWMRDAGFDEVEID-AVGNVVGRYKAADDDAKTLITG 257 (591)
T ss_pred HHHHHHHHHHHHHhccCCCCCCCCceEeeeCCHHHHHHHHHHHHHHHHcCCCeEeEC-CCCCEEEEcCCCCCCCCeEEEe
Confidence 447788888899998632 123468999999999999998 8764 457999999654 35999999
Q ss_pred EecccccCcCCCCCcccCCCCCccccCCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCC------cccHHHHH--
Q 014490 112 ADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEG------GGGAKKML-- 183 (423)
Q Consensus 112 ~H~Dtvp~~~~~~w~~~~~~~g~~~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg------~~Ga~~~~-- 183 (423)
+|+||||.+ |+++|+ .|++++|++++.|++.+.+++++|.|+...+||| +.|++.+.
T Consensus 258 SHlDTV~~g------------G~~DG~---~Gv~a~l~~~~~l~~~~~~~~~~i~vi~~~~EEg~rF~~~~~GS~~~~G~ 322 (591)
T PRK13799 258 SHYDTVRNG------------GKYDGR---EGIFLAIACVKELHEQGERLPFHFEVIAFAEEEGQRFKATFLGSGALIGD 322 (591)
T ss_pred ccccccCCC------------CccccH---HHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCccCCCccccchHHHhCC
Confidence 999999853 888887 6999999999999999999999999999999996 35666664
Q ss_pred ------h----cCC---------------C-------cccceeeeeccCCCC---CCc-eEEeecCcccCcceEEEEEEE
Q 014490 184 ------D----AGA---------------L-------ENVEAIFGLHVSSLF---PVG-TVASRPGPTLAAGGFFEAVIN 227 (423)
Q Consensus 184 ------~----~~~---------------~-------~~~d~~i~~~~~~~~---p~g-~~~~~~g~~~~g~~~~~i~v~ 227 (423)
+ +|. . .++++.+.+|.+.+. ..| .++. .++++|..+++|+|+
T Consensus 323 ~~~~~~~~~d~~G~~~~~~l~~~g~~~~~~~~~~~~~~~~~a~~ElHIEQgp~Le~~~~~igv--V~g~~G~~~~~Itv~ 400 (591)
T PRK13799 323 FNMELLDIKDADGISLREAIQHAGHCIDAIPKIARDPADVLGFIEVHIEQGPVLLELDIPLGI--VTSIAGSARYICEFI 400 (591)
T ss_pred ChHHHHhccCCCCCCHHHHHHHcCCChhhccccccCCCCccEEEEEEeCCCHHHHHCCCcEEE--EeeeccceEEEEEEE
Confidence 1 121 0 134456666666540 001 1222 245679999999999
Q ss_pred eCCCCCCC-CC-CCCcHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEecC-CCCccCCCcEEEEEEEecCChhhHHHH
Q 014490 228 GKGGHAAI-PQ-HTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGG-GAFNIIPDSVTIGGTFRAFSKESIIQL 304 (423)
Q Consensus 228 G~~~Hs~~-p~-~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gg-~~~n~iP~~a~~~~d~R~~~~~~~~~v 304 (423)
|+++|+|. |. .+.||+..+++++..++++..+. +....+++|+.|+++ ...|+||++|++.+|+|..+.++.+.+
T Consensus 401 GkaaHag~~Pm~~r~dAi~aaa~ii~~l~~~~~~~--~~~~~v~tVG~I~~~~ga~NvIP~~a~~~~DiR~~~~e~~e~l 478 (591)
T PRK13799 401 GMASHAGTTPMDMRKDAAAAAAEIALYIEKRAAQD--QHASLVATMGQLNVPSGSTNVIPGRCQFSLDIRAATDEIRDAA 478 (591)
T ss_pred EECCCCCCCChhhchhHHHHHHHHHHHHHHHHHhc--CCCCcEEEEEEEEecCCCCceECCEEEEEEEeeCCCHHHHHHH
Confidence 99999995 53 58899999999999999875432 222357899999863 489999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCeEEEEeeccCCCCccccCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhhcCeEEEE
Q 014490 305 KQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYY 384 (423)
Q Consensus 305 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~ 384 (423)
.+++++.+++.+.+++++++++. ....++...|+++++.+.+++++. |.++. ...++|++|+++|.+..|..+++
T Consensus 479 ~~~i~~~i~~ia~~~g~~~ei~~--~~~~~~~~~d~~lv~~~~~a~~~~-G~~~~--~~~sgag~Da~~~a~~~p~amif 553 (591)
T PRK13799 479 VADILAEIAAIAARRGIEYKAEL--AMKAAAAPCAPELMKQLEAATDAA-GVPLF--ELASGAGHDAMKIAEIMDQAMLF 553 (591)
T ss_pred HHHHHHHHHHHHHHhCCeEEEEE--EecCCCcCCCHHHHHHHHHHHHHc-CCCce--ecCcchHHHHHHHHhhCCEEEEE
Confidence 99999999999988888887776 455667788899999999988875 87652 34678999999999987766554
Q ss_pred eccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 385 LGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 385 ~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
.++. +....|+++|+++++++..++++|..++.
T Consensus 554 ~~~g-----~~g~sHsp~E~v~~edL~~g~~vl~~~l~ 586 (591)
T PRK13799 554 TRCG-----NAGISHNPLESMTADDMELSADAFLDFLN 586 (591)
T ss_pred EecC-----CCCCCCCccccCCHHHHHHHHHHHHHHHH
Confidence 4422 22358999999999999999999999875
No 62
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional
Probab=100.00 E-value=1.1e-38 Score=328.86 Aligned_cols=343 Identities=15% Similarity=0.156 Sum_probs=269.3
Q ss_pred hhHHHHHHHHHHhHhCCCCC-------------CCcHHHHHHHHHHHHhCCC-CeEecccCceEEEEECCC-C-CcEEEE
Q 014490 47 EIFYWMVNIRRKIHENPELG-------------FQEFETSKLIRAELDQMGI-PYKFPVAVTGVVGYIGTG-Q-PPFVAL 110 (423)
Q Consensus 47 ~~~~~~~~~~~~l~~ips~s-------------~~E~~~~~~l~~~l~~~g~-~~~~~~~~~nvia~~~~~-~-~~~ill 110 (423)
.+.+++++.+..|.+|+.+. .++.++++||.+||+++|+ ++..+ ..+|+++++++. + .|+|++
T Consensus 178 ~~~~r~~~~~~~l~~~~~~~~~~~~g~~R~~~s~~~~~~~~~l~~~~~~~Gl~~v~~D-~~GNl~~~~~g~~~~~~~v~~ 256 (591)
T PRK13590 178 VLGNDVWDWAERLAAHSDPGYAEKGQLTVTYLTDAHRACAQQISHWMRDCGFDEVHID-AVGNVVGRYKGSTPQAKRLLT 256 (591)
T ss_pred hHHHHHHHHHHHHhcccCCCCCCCCceeeeeCCHHHHHHHHHHHHHHHHcCCCeeeEC-CCCCEEEEecCCCCCCCeEEE
Confidence 34577888888899987632 2346899999999999999 76654 568999999653 3 489999
Q ss_pred EEecccccCcCCCCCcccCCCCCccccCCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCC------cccHHHH--
Q 014490 111 RADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEG------GGGAKKM-- 182 (423)
Q Consensus 111 ~~H~Dtvp~~~~~~w~~~~~~~g~~~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg------~~Ga~~~-- 182 (423)
.+||||||.+ |+.+|+ +|++++|+++++|++.+..++++|.|+++++||| +.|++.+
T Consensus 257 gsHlDTV~~g------------G~~DG~---~Gv~a~lea~~~l~~~~~~~~~~i~vv~~~~EEg~rF~~~~~GS~~~~G 321 (591)
T PRK13590 257 GSHYDTVRNG------------GKYDGR---LGIFVPMACVRELHRQGRRLPFGLEVVGFAEEEGQRYKATFLGSGALIG 321 (591)
T ss_pred ecccccCCCC------------CCcccH---HHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCccccCCccccchHHHhC
Confidence 9999999854 666664 7999999999999999988889999999999995 4677742
Q ss_pred ------Hh---------------cCC----C-------cccceeeeeccCCCCC---Cc-eEEeecCcccCcceEEEEEE
Q 014490 183 ------LD---------------AGA----L-------ENVEAIFGLHVSSLFP---VG-TVASRPGPTLAAGGFFEAVI 226 (423)
Q Consensus 183 ------~~---------------~~~----~-------~~~d~~i~~~~~~~~p---~g-~~~~~~g~~~~g~~~~~i~v 226 (423)
++ .|+ + ..+.+.+.+|.+++.- .| .+.. .++.+|..+++|++
T Consensus 322 ~~~~~~~~~~d~~g~~~~~al~~~g~~~~~~~~~~~~~~~~~a~~ElHiEqg~~Le~~~~~~gv--V~~~~G~~~~~v~v 399 (591)
T PRK13590 322 DFDPAWLDQKDADGITMREAMQHAGLCIDDIPKLRRDPARYLGFVEVHIEQGPVLNELDLPLGI--VTSINGSVRYVGEM 399 (591)
T ss_pred CChHHHHhccCCCCCCHHHHHHHcCCChhhccccccCCCCccEEEEEEeCCCHHHHHCCCceEE--EeeeeccEEEEEEE
Confidence 22 111 0 1334566777665410 01 1111 24457999999999
Q ss_pred EeCCCCCCC-CCC-CCcHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEec-CCCCccCCCcEEEEEEEecCChhhHHH
Q 014490 227 NGKGGHAAI-PQH-TIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEG-GGAFNIIPDSVTIGGTFRAFSKESIIQ 303 (423)
Q Consensus 227 ~G~~~Hs~~-p~~-g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~g-g~~~n~iP~~a~~~~d~R~~~~~~~~~ 303 (423)
+|+++|+|. |.. +.||+..+++++..+++.... ....+++|+.|++ |...|+||++|++++|+|..+.++.+.
T Consensus 400 ~GkaaHag~~P~~~r~dAi~aaa~~i~~l~~~~~~----~~~~v~tVG~i~~~Gg~~NVIP~~a~~~iDiR~~~~e~~e~ 475 (591)
T PRK13590 400 IGMASHAGTTPMDRRRDAAAAVAELALYVEQRAAQ----DGDSVGTVGMLEVPGGSINVVPGRCRFSLDIRAPTDAQRDA 475 (591)
T ss_pred EeECCCCCCCCchhcccHHHHHHHHHHHHHHHHhc----CCCcEEEEEEEEECCCCCceECCEEEEEEEeeCCCHHHHHH
Confidence 999999995 544 689999999999999886422 1234779999874 668999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCeEEEEeeccCCCCccccCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhhcCeEE-
Q 014490 304 LKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYF- 382 (423)
Q Consensus 304 v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~- 382 (423)
+.+.+++.+++.+..++++++++. ....++...|+++++.+.+++++. |.++. ....+|++|+++|.+.+|..+
T Consensus 476 v~~~i~~~i~~ia~~~g~~vei~~--~~~~~~~~~d~~lv~~~~~aa~~~-G~~~~--~~~sggg~Da~~~a~~~p~~mi 550 (591)
T PRK13590 476 MVADVLAELEAICERRGLRYTLEE--TMRAAAAPSAPAWQQRWEAAVAAL-GLPLF--RMPSGAGHDAMKLHEIMPQAML 550 (591)
T ss_pred HHHHHHHHHHHHHHHcCCeEEEEE--eecCCCcCCCHHHHHHHHHHHHHc-CCCcc--cCCcchhHHHHHHHHHCCEEEE
Confidence 999999999999988898888876 456677788899999999999885 87653 346789999999999888554
Q ss_pred EEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 383 YYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 383 ~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
++.|.. ....|+++|+++++++.+++++|..++.
T Consensus 551 fgpg~~------~g~sH~p~E~v~~edL~~g~~vl~~ll~ 584 (591)
T PRK13590 551 FVRGEN------AGISHNPLESSTADDMQLAVQAFQHLLD 584 (591)
T ss_pred EEeeCC------CCCCCCCccCCCHHHHHHHHHHHHHHHH
Confidence 433311 1358999999999999999999999875
No 63
>KOG2276 consensus Metalloexopeptidases [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-38 Score=294.38 Aligned_cols=374 Identities=17% Similarity=0.196 Sum_probs=289.0
Q ss_pred hHHHHhhcCchhHHHHHHHHHHhHhCCCCCCCc------HHHHHHHHHHHHhCCCCeEec-------------ccCceEE
Q 014490 37 VKFLDFAKKPEIFYWMVNIRRKIHENPELGFQE------FETSKLIRAELDQMGIPYKFP-------------VAVTGVV 97 (423)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~E------~~~~~~l~~~l~~~g~~~~~~-------------~~~~nvi 97 (423)
.++.+.++.++ +++++.|++.++|+|+|... .++++|++++|+++|-.++.. ...+.++
T Consensus 5 ~~~fq~id~~~--de~~~~L~e~v~iqsvs~dp~~r~~v~rm~~~~~~~l~~lG~~~~l~dlg~q~~~~g~~v~lPpvvl 82 (473)
T KOG2276|consen 5 TKVFQSIDLNK--DEFINTLREAVAIQSVSADPTKRLEVRRMADWLRDYLTKLGAPLELVDLGYQSLPDGQIVPLPPVVL 82 (473)
T ss_pred HHHHHHhhccH--HHHHHHHHHHhcccccccCccccHHHHHHHHHHHHHHHHhCCceeeeecccCCCCCCcccccChhhh
Confidence 36788899988 99999999999999999753 678999999999999766541 2345678
Q ss_pred EEECCCC-CcEEEEEEecccccCcCCCCCccc----CCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEE
Q 014490 98 GYIGTGQ-PPFVALRADMDALAMEESVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVF 169 (423)
Q Consensus 98 a~~~~~~-~~~ill~~H~Dtvp~~~~~~w~~~----~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~ 169 (423)
+++++.+ .++++++||+||+|+..+++|.++ +++||++||||+ ||++++++.|++++++.+++++.||+|+|
T Consensus 83 ~~~Gsdp~KktvlvYgHlDVqpA~~~DgW~TdPF~Lt~~~GkL~GRG~TDdkGPv~~wi~av~a~~~~g~~lpvnv~f~~ 162 (473)
T KOG2276|consen 83 GVLGSDPSKKTVLVYGHLDVQPANLEDGWNTDPFTLTEDDGKLFGRGATDDKGPVLSWIHAVKALQQLGIDLPVNVVFVF 162 (473)
T ss_pred hcccCCCCcceEEEEeeeeeeecCCCCCCcCCCeEEEEECCEEeccCcCCCCccchHHHHHHHHHHHhCccccceEEEEE
Confidence 8887664 489999999999999989999765 678999999998 79999999999999999999999999999
Q ss_pred ecCCC-CcccHHHHHh---cCCCcccceeeeeccCCCCCCceEEeecCcccCcceEEEEEEEe--CCCCCCC-CCCCCcH
Q 014490 170 QPAEE-GGGGAKKMLD---AGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVING--KGGHAAI-PQHTIDP 242 (423)
Q Consensus 170 ~~~EE-g~~Ga~~~~~---~~~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G--~~~Hs~~-p~~g~nA 242 (423)
.+.|| |+.|...+++ +.+++++|++.+-+ ..+.|+-.-...++.+|...|.|+|.| +..|||. ...-.-|
T Consensus 163 EgmEEsgS~~L~~l~~~~kD~~~~~vD~vciSd---nyWlg~kkPcltyGlRG~~yf~i~v~g~~~DlHSGvfGG~~hE~ 239 (473)
T KOG2276|consen 163 EGMEESGSEGLDELIEKEKDKFFKDVDFVCISD---NYWLGTKKPCLTYGLRGVIYFQIEVEGPSKDLHSGVFGGVVHEA 239 (473)
T ss_pred EechhccCccHHHHHHHHhhhhhccCCEEEeeC---ceeccCCCcccccccccceeEEEEEeecccccccccccchhHHH
Confidence 99999 8888888875 34567888877533 333332111112344699999999999 7789994 3233356
Q ss_pred HHHHHHHHHHHHHhhccc----------------------CC---------------C-----------CCCceEEEEEE
Q 014490 243 IVAASNVIVSLQHLVSRE----------------------AD---------------P-----------LDSQVLTVAKF 274 (423)
Q Consensus 243 i~~~~~~i~~l~~~~~~~----------------------~~---------------~-----------~~~~t~~v~~i 274 (423)
+..|..++..|.....+. .+ + =..+++++..|
T Consensus 240 m~dL~~~ms~Lv~~~~~Ilipgiy~~vaplteeE~~~y~~I~f~~~e~~~~tg~~~l~~~~k~~~l~~rWryPSLsihgI 319 (473)
T KOG2276|consen 240 MNDLVLVMSSLVDIQGRILIPGIYEDVAPLTEEEDSIYDDIDFDVEEFKEATGSQMLPTDDKKRILMHRWRYPSLSIHGI 319 (473)
T ss_pred HHHHHHHHHHhcCcCCcEeccchhhhccCCChHHHhhhhcceeeHhhhhccccccccccCchHHHhhhhcccCccceecc
Confidence 666666666654332110 00 0 01457888888
Q ss_pred ec----CCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCcc--ccCHHHHHHHHH
Q 014490 275 EG----GGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVT--VNNKNLHEHFQK 348 (423)
Q Consensus 275 ~g----g~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~~~~~~l~~ 348 (423)
+| ..+..+||.++...|.+|+.|.++++.+.+.+.++++....+.+.+-++......+..+| +.+++-+.++++
T Consensus 320 eGaFs~pG~kTVIP~kVigkfSiRlVP~md~e~verlv~~yl~~~f~~~nS~N~l~~~~~~~~~~Wv~d~~~~~y~a~kr 399 (473)
T KOG2276|consen 320 EGAFSGPGAKTVIPAKVVGKFSIRLVPNMDPEQVERLVTRYLEKVFAELNSPNKLKVSMGHAGAPWVSDPDDPHYLALKR 399 (473)
T ss_pred cceeeCCCceEEeehhheeeeEEEecCCCCHHHHHHHHHHHHHHHHHhcCCCCceEEeecCCCCceecCCCchhHHHHHH
Confidence 75 357889999999999999999999999999999999998888766544444325555555 445788999999
Q ss_pred HHHHhcCCcccccCCCCCCCchHHHH-Hhh--cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHhC
Q 014490 349 VAADMLGVQNIKENRPLMGTEDFSFF-AEA--IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATS 423 (423)
Q Consensus 349 ~~~~~~g~~~~~~~~~~~g~tD~~~~-~~~--ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~~ 423 (423)
+++.++|.++ .....+||...... ... .+.+...+|..+ +++|+.||++++.++.++++++++++.+
T Consensus 400 A~~~v~gveP--d~~ReGgSIPvt~tfQ~~~~~~V~llP~G~~d------D~aHsqNEkl~i~N~~~G~k~l~ay~~e 469 (473)
T KOG2276|consen 400 AIETVYGVEP--DFTREGGSIPVTLTFQDITGKSVLLLPYGASD------DGAHSQNEKLNITNYVEGTKVLAAYISE 469 (473)
T ss_pred HHHHhhCCCC--CccccCCccceehHHHHHhCCCeEEecccccc------cchhhhcccccHHHHhhhHHHHHHHHHH
Confidence 9999999887 55678888876664 443 455556666544 4699999999999999999999998863
No 64
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism]
Probab=99.93 E-value=4.1e-25 Score=214.07 Aligned_cols=347 Identities=17% Similarity=0.171 Sum_probs=264.9
Q ss_pred HHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeE-e-------c---ccCceEEEEECCCC--CcEEEEEEeccc
Q 014490 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYK-F-------P---VAVTGVVGYIGTGQ--PPFVALRADMDA 116 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~-~-------~---~~~~nvia~~~~~~--~~~ill~~H~Dt 116 (423)
+++++.+.++++||+.|.+|.+++.|+.+|++.+|+.++ . . .+..-+.+.+.+.- -|++-|.+|+||
T Consensus 5 ~~l~~~F~~~~kI~~~S~~e~~~~p~~~~~~k~~~~~v~dE~~~i~~~~~a~~~~~~~~~~L~a~~d~V~~i~~~sh~Dt 84 (414)
T COG2195 5 ERLLDRFLELVKIPTQSKHEKAVAPSTVGQAKLLGLLVEDELGNIGLKKPATAGENYVPAVLQAHLDMVPEIGFISHHDT 84 (414)
T ss_pred HHHHHHHHHHeeCCCCCCCccccccccHHHHHHcCchhhhhhccccccccccCCCCeeeEEeeccccccccccccccccc
Confidence 678889999999999999999999999999999999883 2 1 11112555565543 288999999999
Q ss_pred ccCcC----CCCC----------------------cccC----------CCCC-ccccCCchHHHHHHHHHHHHHHhcc-
Q 014490 117 LAMEE----SVEW----------------------EHKS----------KVPG-KMHACGHDAHVAMLLGAAKMLQVFR- 158 (423)
Q Consensus 117 vp~~~----~~~w----------------------~~~~----------~~~g-~~~grG~k~~~a~~l~a~~~l~~~~- 158 (423)
+|-.. ..+| -++. ..+| .+-|-.+|+|++.++.++..+++..
T Consensus 85 ~~d~~~~~v~~~~l~~~~Gad~i~~~~~~a~L~~~~~P~~~~~t~~~ei~~dGa~LLgaD~kAGia~i~~al~~~~~~~~ 164 (414)
T COG2195 85 VPDPIGPNVNPQILKATLGADNIGLAIGLAVLSPEHFPLEVLLTGDEEITTDGATLLGADDKAGIAEIMTALSVLREKHP 164 (414)
T ss_pred cccccccccCCceeeeccCcchhhhhhHHhhcCcccCCceeeeecceEEeccCccccCCcchhHHHHHHHHHHHHhhcCc
Confidence 95211 0122 0110 0122 2344444799999999999999652
Q ss_pred ccCCceEEEEEecCCC-CcccHHHHHhcCCCcccceeeeeccCCCCCCceEEeecCcccCcceEEEEEEEeCCCCCCC-C
Q 014490 159 HEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAI-P 236 (423)
Q Consensus 159 ~~~~~~i~~~~~~~EE-g~~Ga~~~~~~~~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~-p 236 (423)
..+.++|++.|+++|| |+.|++.+.-... .+++.+.++ |.+.|.+.+.. .+...+++++.|+.+|++. +
T Consensus 165 ~i~h~~i~~g~s~~Ee~g~rg~~~~~~a~f--~a~~ay~iD---Gg~~g~i~~ea----~~~~~~~~~~~g~~~h~~~a~ 235 (414)
T COG2195 165 EIPHGGIRGGFSPDEEIGGRGAANKDVARF--LADFAYTLD---GGPVGEIPREA----FNAAAVRATIVGPNVHPGSAK 235 (414)
T ss_pred cccccCeEEEecchHHhhhhhhhhccHHhh--hcceeEecC---CCccCeeeeec----cchheeeeeeeccCcCccchH
Confidence 3568999999999999 7799998854321 345555443 55677776542 3677899999999999995 6
Q ss_pred CCCCcHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEecCCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHH
Q 014490 237 QHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQA 316 (423)
Q Consensus 237 ~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~ 316 (423)
....||+..+.+.+..+.... . ...++.+.+..+.++..|.|.+++.....+|.......+.....+++.+++.+
T Consensus 236 ~~~i~a~~~a~e~~~~~~~~~---~--~e~t~~~~Gv~~~~~~~~~V~~~s~~~~~iR~~d~~~~~s~~~~~~~~~~~~~ 310 (414)
T COG2195 236 GKMINALLLAAEFILELPLEE---V--PELTEGPEGVYHLGDSTNSVEETSLNLAIIRDFDNLLFRARKDSMKDVVEEMA 310 (414)
T ss_pred HHHhhHHHhhhhhhhcCCccc---c--cccccccceEEeccccccchhhhhhhhhhhhhcchhHHHHhHHHHHHHHHHHH
Confidence 678899998888888765432 1 12356677777888999999999999999999998888888888888888888
Q ss_pred HhcC--CeEEEEeeccCCCCccc--cCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhh-cCeEEEEeccCCCC
Q 014490 317 SVQR--CNATVTFDDKSFYPVTV--NNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDET 391 (423)
Q Consensus 317 ~~~~--~~~~~~~~~~~~~~~~~--~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~ 391 (423)
++++ ..++++. ...||.|. .++.++..++++++++ +.++ ......|++|++.+... +|+.++++|| .
T Consensus 311 ~~~g~~~~~~~~~--~~~Yp~~~~~~~~~iv~~a~~a~~~l-~~~p--~v~~i~gGtd~~~is~~g~p~~~i~~Gp-~-- 382 (414)
T COG2195 311 ASLGKLAGAELEV--KDSYPGWKIKPDSPLVDLAKKAYKEL-GIKP--KVKPIHGGTDGGVLSFKGLPTPNISTGP-G-- 382 (414)
T ss_pred HHhhhccceEEEE--eccccCcCCCCCchHHHHHHHHHHHh-CCCc--eEEEeecccchhhhhccCCCCceEeccc-c--
Confidence 8877 6677776 66777764 4577999999999999 5556 34589999999999888 8988889995 3
Q ss_pred CCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 392 KGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 392 pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
.+.|+++|+++++++.+.+++...++.
T Consensus 383 ----~n~Hs~~E~v~I~s~ek~~~~l~~l~~ 409 (414)
T COG2195 383 ----ENPHSPDEFVSIESMEKAVQVLVELLK 409 (414)
T ss_pred ----cCCCCccceeehHHHHHHHHHHHHHHH
Confidence 359999999999999999999988764
No 65
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of proteins contains the metallopeptidases and non-peptidase homologues (amidohydrolases) that belong to the MEROPS peptidase family M20 (clan MH) []. The peptidases of this clan have two catalytic zinc ions at the active site, bound by His/Asp, Asp, Glu, Asp/Glu and His. The catalysed reaction involves the release of an N-terminal amino acid, usually neutral or hydrophobic, from a polypeptide []. The peptidase M20 family has four sub-families: M20A - type example, glutamate carboxypeptidase from Pseudomonas sp. RS16 (P06621 from SWISSPROT) M20B - type example, peptidase T from Escherichia coli (P29745 from SWISSPROT) M20C - type example, X-His dipeptidase from E. coli (P15288 from SWISSPROT) M20D - type example, carboxypeptidase Ss1 from Sulfolobus solfataricus (P80092 from SWISSPROT) ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3T68_A 3T6M_A 2F8H_A 3GB0_A 3IO1_B 2ZOF_A 2ZOG_B 3MRU_B 3N5F_A 1Z2L_B ....
Probab=99.88 E-value=1.4e-22 Score=180.24 Aligned_cols=176 Identities=28% Similarity=0.392 Sum_probs=132.8
Q ss_pred EEEEecccccCcCCCCCccc----CCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Ccc-cH
Q 014490 109 ALRADMDALAMEESVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGG-GA 179 (423)
Q Consensus 109 ll~~H~Dtvp~~~~~~w~~~----~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~-Ga 179 (423)
+|++|||||| + .++|.++ .+++|++||||+ |+++++++.|++.|++.+.+++++|.|+|+++|| ++. |+
T Consensus 1 ll~~H~Dtv~-~-~~~w~~~pf~~~~~~~~~~grG~~D~k~~~~~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~g~ 78 (189)
T PF01546_consen 1 LLYAHMDTVP-G-PEGWKHDPFELSIEDGRLYGRGADDMKGGIAAMLAALKALKESGDDLPGNIIFLFTPDEEIGSIGGA 78 (189)
T ss_dssp EEEEES-BCS-T-GGGSSSSTTSEEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTTTCSSEEEEEEESTCCGTSTTHH
T ss_pred CccccccccC-C-cCcCCCCCcccEEECCEEEcCCcCCCcccHHHHHHHHHHHHhccccccccccccccccccCCCcchh
Confidence 6899999999 5 7899765 567899999998 7999999999999998888999999999999999 666 99
Q ss_pred HHHHhcCCCc--ccceeeeeccCCCCCCceEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhh
Q 014490 180 KKMLDAGALE--NVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLV 257 (423)
Q Consensus 180 ~~~~~~~~~~--~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~ 257 (423)
+.+++++... .+|+.+.. +|+.. +...
T Consensus 79 ~~l~~~~~~~~~~~~~~~~~-----e~~~~----------~~~~------------------------------------ 107 (189)
T PF01546_consen 79 KHLLEEGAFFGLHPDYVIIG-----EPTGK----------GGVG------------------------------------ 107 (189)
T ss_dssp HHHHHHCEEEEEEESEEEEC-----ECETT----------SEEE------------------------------------
T ss_pred hhhhhhcccccccccccccc-----ccccc----------cccc------------------------------------
Confidence 9999875211 23444321 11111 1000
Q ss_pred cccCCCCCCceEEEEEEecCCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCccc
Q 014490 258 SREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTV 337 (423)
Q Consensus 258 ~~~~~~~~~~t~~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (423)
..
T Consensus 108 ------------------------------------------------------------------------------~~ 109 (189)
T PF01546_consen 108 ------------------------------------------------------------------------------SD 109 (189)
T ss_dssp ------------------------------------------------------------------------------HC
T ss_pred ------------------------------------------------------------------------------cc
Confidence 34
Q ss_pred cCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHh--hcCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHH
Q 014490 338 NNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAE--AIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAA 415 (423)
Q Consensus 338 ~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~--~ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~ 415 (423)
.++++++.+++++++.++... .+...+|++|++++.. ..+..++++| ||. ..+|++||+++++++.++++
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~tD~~~~~~~~~~~~~~i~~G-----~~~-~~~H~~~E~i~~~~l~~~~~ 181 (189)
T PF01546_consen 110 NDPPLVQALQAAAQEVGGEPP--EPVASGGGTDAGFLAEVKGLGIPAIGFG-----PGG-SNAHTPDEYIDIEDLVKGAK 181 (189)
T ss_dssp TCHHHHHHHHHHHHHTTSSEE--EEEEESSSSTHHHHHCHHHTTEEEEEEE-----SCE-ESTTSTT-EEEHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHhhccc--cccceeccccchhhhhhhccccceeeeC-----CCC-CCCCCCCcEecHHHHHHHHH
Confidence 567799999999999965233 3457899999999995 3233344455 333 56999999999999999999
Q ss_pred HHHHHHhC
Q 014490 416 LHASLATS 423 (423)
Q Consensus 416 ~~~~~i~~ 423 (423)
+|++++++
T Consensus 182 ~~~~~l~n 189 (189)
T PF01546_consen 182 IYAALLEN 189 (189)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhC
Confidence 99999874
No 66
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism]
Probab=99.81 E-value=9.2e-19 Score=164.85 Aligned_cols=259 Identities=14% Similarity=0.127 Sum_probs=179.3
Q ss_pred HHHHHHHHHhHhCCCCCCC--cHHHHHHHHHHHHhCCCCeEe----------cc--cCceEEEEECCC-CCcEEEEEEec
Q 014490 50 YWMVNIRRKIHENPELGFQ--EFETSKLIRAELDQMGIPYKF----------PV--AVTGVVGYIGTG-QPPFVALRADM 114 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~~--E~~~~~~l~~~l~~~g~~~~~----------~~--~~~nvia~~~~~-~~~~ill~~H~ 114 (423)
+++.++...|++.||+.+. |...+++|...|+++.+.-+. .+ ++.||+|-++++ +..+|++.||+
T Consensus 8 e~v~~lt~~LV~~~SvtgT~GE~a~ad~l~~vL~~~pYFqehped~~~~pi~nDpygR~nv~AlVrg~~~k~tvvl~gH~ 87 (553)
T COG4187 8 ERVRALTLSLVSWPSVTGTPGEGAFADRLLGVLGELPYFQEHPEDLWLQPIHNDPYGRRNVFALVRGGTSKRTVVLHGHF 87 (553)
T ss_pred HHHHHHHHHHeeccccCCCcccccHHHHHHHHHhcCchhhhChHhhcccCCCCCccccceeEEEEecCCCCceEEEeecc
Confidence 7788999999999999875 688999999999998764333 12 688999999775 35899999999
Q ss_pred ccccCcCCCCCc---cc----------------------CCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEE
Q 014490 115 DALAMEESVEWE---HK----------------------SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIV 166 (423)
Q Consensus 115 Dtvp~~~~~~w~---~~----------------------~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~ 166 (423)
|||.+.|....+ |+ -..+++|+|||+ |+|+|+.|.+++-+.+.+ ...+||.
T Consensus 88 DtV~iedYg~lKd~Afdp~~ll~~~i~~~e~~~erv~~Dl~SGDwlfGRGa~DMKsGlav~la~L~~fa~~~-~~~GNlL 166 (553)
T COG4187 88 DTVSIEDYGELKDLAFDPLALLDALIESLELREERVLRDLESGDWLFGRGALDMKSGLAVHLACLEEFAART-DRQGNLL 166 (553)
T ss_pred ceeecccccchhhhccCHHHHHHHHHHhhccCHHHHhhhhhccCcccCCCchhhhhhhHHHHHHHHHHhhCC-CCCCcEE
Confidence 999887765443 21 134789999998 899999999999998874 6899999
Q ss_pred EEEecCCC-CcccHHHHHhc--CCC--cccceeeeeccCCCCCC-----ceEEeecCcccCcceEEEEEEEeCCCCCCCC
Q 014490 167 LVFQPAEE-GGGGAKKMLDA--GAL--ENVEAIFGLHVSSLFPV-----GTVASRPGPTLAAGGFFEAVINGKGGHAAIP 236 (423)
Q Consensus 167 ~~~~~~EE-g~~Ga~~~~~~--~~~--~~~d~~i~~~~~~~~p~-----g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p 236 (423)
|+.++||| ...|++..... +.. .+.++..+++.|...|. +...+ .+..|.+---..|.|+..|.|.|
T Consensus 167 f~a~pdEE~~s~G~r~a~~~L~~L~kk~~l~~~~~IN~D~~~~~~dGd~~ryvY---tGtiGKLLp~f~vvG~etHvG~~ 243 (553)
T COG4187 167 FMAVPDEEVESRGMREARPALPGLKKKFDLEYTAAINLDVTSDQGDGDQGRYVY---TGTIGKLLPFFFVVGCETHVGYP 243 (553)
T ss_pred EEeccchhhhcccHHHHHHHHHHHHHhhCceEEEEeccccccCCCCCccceEEE---eccchhhcceeEEEeeccccCCc
Confidence 99999999 77788766432 111 13455555555543332 22222 23357777778899999999999
Q ss_pred CCCCcHHHHHHHHHHHHHHhh---cccCCCCCCceEEEEEEecCCCCcc-CCCcEEEEEEEecCChhhHHHHHHHHHHHH
Q 014490 237 QHTIDPIVAASNVIVSLQHLV---SREADPLDSQVLTVAKFEGGGAFNI-IPDSVTIGGTFRAFSKESIIQLKQRIEEVV 312 (423)
Q Consensus 237 ~~g~nAi~~~~~~i~~l~~~~---~~~~~~~~~~t~~v~~i~gg~~~n~-iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~ 312 (423)
..|+||-..++.++.+|+-.. .+.......+-.+.-.=.=-...|| .|.++.+.|++-+.. .+++++.+++++..
T Consensus 244 f~Gvnan~maSei~~~le~N~~l~dr~~Ge~t~PPs~L~qkDlKe~Y~VqTp~~a~~~fN~l~h~-~ta~~~~d~l~~~a 322 (553)
T COG4187 244 FEGVNANFMASEITRRLELNADLADRVDGEITPPPSCLEQKDLKESYNVQTPERAWLYFNWLYHS-RTAKELFDRLKEEA 322 (553)
T ss_pred ccCCCHHHHHHHHHHHhhcChhhhhhhCCeeCCCcHhhhhhhhhhhccccCcchhhhhheehhhc-CCHHHHHHHHHHHH
Confidence 999999999999999986432 2221111111111100000123343 488999999986543 44455555544444
Q ss_pred H
Q 014490 313 M 313 (423)
Q Consensus 313 ~ 313 (423)
+
T Consensus 323 ~ 323 (553)
T COG4187 323 E 323 (553)
T ss_pred H
Confidence 3
No 67
>PRK09961 exoaminopeptidase; Provisional
Probab=99.75 E-value=1.5e-16 Score=153.71 Aligned_cols=246 Identities=15% Similarity=0.139 Sum_probs=168.5
Q ss_pred HHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEecccCceEEEEECCCCCcEEEEEEecccccC-----cC-------
Q 014490 54 NIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAM-----EE------- 121 (423)
Q Consensus 54 ~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~~~~~~ill~~H~Dtvp~-----~~------- 121 (423)
+++++|+++||+|++|.++++++.++|+++|++++. +..+|+++++++.++|+|+|.||||+|+. .+
T Consensus 4 ~~L~~L~~~~s~sG~E~~v~~~i~~~l~~~~~~v~~-D~~Gnvi~~~~g~~~~~v~l~aHmDevg~~V~~I~~~G~l~~~ 82 (344)
T PRK09961 4 SLLKALSEADAIASSEQEVRQILLEEADRLQKEVRF-DGLGSVLIRLNESTGPKVMICAHMDEVGFMVRSISREGAIDVL 82 (344)
T ss_pred HHHHHHHhCCCCCCChHHHHHHHHHHHHhhCCEEEE-CCCCCEEEEEcCCCCCEEEEEeccceeceEEEEECCCceEEEE
Confidence 579999999999999999999999999999998776 57889999886554589999999999943 11
Q ss_pred -CCCCc-------------------------------cc---------C-----------------------CCCCcccc
Q 014490 122 -SVEWE-------------------------------HK---------S-----------------------KVPGKMHA 137 (423)
Q Consensus 122 -~~~w~-------------------------------~~---------~-----------------------~~~g~~~g 137 (423)
-.+|. ++ + ..++++.|
T Consensus 83 ~vGG~~~~~~~~~~v~i~~~~g~~i~Gvi~~~~~~~~~~~l~iDiG~~s~ee~~~~GI~~Gd~v~~~~~~~~~~~~~i~g 162 (344)
T PRK09961 83 PVGNVRMAARQLQPVRITTREECKIPGLLNGDRQGNDVSAMRVDIGARSYDEVMQAGIRPGDRVTFDTTFQVLPHQRVMG 162 (344)
T ss_pred eCCCccccccCCCEEEEEeCCCCEeeEEEChhhcCCCHHHEEEEcCCCCHHHHHhcCCCCCCEEEEcceeEEecCCEEEE
Confidence 00111 00 0 02345556
Q ss_pred CCc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHhcCCCcccceeeeeccCCCCCCceEEeecCc
Q 014490 138 CGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGP 214 (423)
Q Consensus 138 rG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~~~~~~~~~~d~~i~~~~~~~~p~g~~~~~~g~ 214 (423)
+.- +.++++++.+++.+++. +++.+|+++|+++|| |..||+..... + +.|.+|+++..+
T Consensus 163 kalDnR~g~~~lle~l~~l~~~--~~~~~v~~~~tvqEEvG~rGa~~aa~~--i-~pd~~I~vDv~~------------- 224 (344)
T PRK09961 163 KAFDDRLGCYLLVTLLRELHDA--ELPAEVWLVASSSEEVGLRGGQTATRA--V-SPDVAIVLDTAC------------- 224 (344)
T ss_pred eechhhHhHHHHHHHHHHhhhc--CCCceEEEEEEcccccchHHHHHHHhc--c-CCCEEEEEeccC-------------
Confidence 554 58999999999999755 478999999999999 88899877432 2 345555443210
Q ss_pred ccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEecCCCCccCCCcEEEEEEEe
Q 014490 215 TLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFR 294 (423)
Q Consensus 215 ~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gg~~~n~iP~~a~~~~d~R 294 (423)
|.-.|... . .+...+..|
T Consensus 225 -----------------~~d~~~~~-----------------------~-----~~~~~lg~G----------------- 242 (344)
T PRK09961 225 -----------------WAKNFDYG-----------------------A-----ANHRQIGNG----------------- 242 (344)
T ss_pred -----------------CCCCCCCC-----------------------C-----CcccccCCC-----------------
Confidence 00011000 0 000011111
Q ss_pred cCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCccccCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHH
Q 014490 295 AFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFF 374 (423)
Q Consensus 295 ~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~ 374 (423)
.-+. . ... ....++.+.+.+++++++. +.+.... ...+|+||++.+
T Consensus 243 --------------------------p~i~--~--~D~--~~i~~~~l~~~l~~~A~~~-~Ip~Q~~-~~~ggGTDa~~~ 288 (344)
T PRK09961 243 --------------------------PMLV--L--SDK--SLIAPPKLTAWIETVAAEI-GIPLQAD-MFSNGGTDGGAV 288 (344)
T ss_pred --------------------------ceEE--E--ccC--CcCCCHHHHHHHHHHHHHc-CCCcEEE-ecCCCcchHHHH
Confidence 1111 1 101 1245778999999999887 7655321 234578999977
Q ss_pred Hh--h-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 375 AE--A-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 375 ~~--~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
.. . +|++.+++|.. ..|+++|+++++++.++++++..++.
T Consensus 289 ~~~~~Giptv~ig~p~r--------y~Hs~~E~v~~~D~~~~~~Ll~~~i~ 331 (344)
T PRK09961 289 HLTGTGVPTVVMGPATR--------HGHCAASIADCRDILQMIQLLSALIQ 331 (344)
T ss_pred HHhCCCCCEEEechhhh--------cccChhheEEHHHHHHHHHHHHHHHH
Confidence 65 4 89888877643 49999999999999999999999874
No 68
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family. This model describes a subfamily of MEROPS peptidase family M42, a glutamyl aminopeptidase family that also includes the cellulase CelM from Clostridium thermocellum and deblocking aminopeptidases that can remove acylated amino acids. Members of this family occur in a three gene cassette with an amidotransferase (TIGR03104)in the asparagine synthase (glutamine-hydrolyzing) family, and a probable acetyltransferase (TIGR03103) in the GNAT family.
Probab=99.75 E-value=2.5e-16 Score=151.61 Aligned_cols=240 Identities=18% Similarity=0.211 Sum_probs=168.5
Q ss_pred HHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEecccCceEEEEECC-CCCcEEEEEEecccccC-----cC--
Q 014490 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGT-GQPPFVALRADMDALAM-----EE-- 121 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~-~~~~~ill~~H~Dtvp~-----~~-- 121 (423)
+.+.+++++|+++||+|+.|.+++++|.++|+++|++++. +...|++|.+.+ .++|+|+|.||||+|+. .+
T Consensus 3 ~~~~~lLk~Lv~~~s~SG~E~~V~~~l~~~l~~~g~ev~~-D~~Gnlia~~~g~~~~~~v~l~aHmDevG~~V~~I~~~G 81 (343)
T TIGR03106 3 DYLTETLLALLAIPSPTGFTDAVVRYVAERLEDLGIEYEL-TRRGAIRATLPGREATPARAVVTHLDTLGAMVRELKDNG 81 (343)
T ss_pred HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCeEEE-CCCeEEEEEECCCCCCCeEEEEEeeccccceeeEECCCC
Confidence 5688999999999999999999999999999999999876 468899999865 34589999999999943 11
Q ss_pred ------CCCCc------------------------------------------cc-------------------------
Q 014490 122 ------SVEWE------------------------------------------HK------------------------- 128 (423)
Q Consensus 122 ------~~~w~------------------------------------------~~------------------------- 128 (423)
-.+|+ ++
T Consensus 82 ~l~~~~iGG~~~~~l~g~~v~i~t~~g~~~Gvi~~~~~~~H~~~~~~~~~~~~~~~~~l~iDiG~~s~ee~~~lGV~~Gd 161 (343)
T TIGR03106 82 RLELVPIGHWSARFAEGARVTIFTDSGEFRGTILPLKASGHAFNEEIDSQPTGWDHVEVRVDARASCRADLVRLGISVGD 161 (343)
T ss_pred eEEEEecCCCcccceeCCEEEEEeCCCeEEEEECCCCCCCccCChHHccCCCCCcccEEEEECCcCCHHHHHHcCCCCCC
Confidence 00111 00
Q ss_pred ---------CCCCCccccCCc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHhcCCCccccee--
Q 014490 129 ---------SKVPGKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAI-- 194 (423)
Q Consensus 129 ---------~~~~g~~~grG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~~~~~~~~~~d~~-- 194 (423)
...+|++|||+. |+++++++.+++.|++.+..++.+|.++|+++|| | .|+...+ ..|.+
T Consensus 162 ~v~~~~~~~~~~~~~i~gr~~D~K~G~a~~l~~~~~l~~~~~~~~~~v~~~~t~qEEvG-~gaa~~i------~pd~a~~ 234 (343)
T TIGR03106 162 FVAFDPQPEFLANGFIVSRHLDDKAGVAALLAALKAIVEHKVPLPVDVHPLFTITEEVG-SGASHAL------PPDVAEL 234 (343)
T ss_pred EEEECCccEEecCCEEEEEecccHHhHHHHHHHHHHHHhcCCCCCceEEEEEECCcccC-ccchhcc------cHhhhcc
Confidence 013678999996 8999999999999998776788999999999999 6 4532211 12222
Q ss_pred eeeccCCCCCCceEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEE
Q 014490 195 FGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKF 274 (423)
Q Consensus 195 i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i 274 (423)
+.++ ++ . + .|.. +.+
T Consensus 235 i~vd-------------------------~~--~----~-~p~~---------------------------------~~l 249 (343)
T TIGR03106 235 VSVD-------------------------NG--T----V-APGQ---------------------------------NSS 249 (343)
T ss_pred EEEE-------------------------ec--c----c-CCCC---------------------------------CcC
Confidence 2211 10 0 0 1100 000
Q ss_pred ecCCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCccccCHHHHHHHHHHHHHhc
Q 014490 275 EGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADML 354 (423)
Q Consensus 275 ~gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~ 354 (423)
.. |.-+.+. .. ....+..+.+.+.+++++.
T Consensus 250 g~-------------------------------------------Gp~i~~~----d~--~~~~~~~l~~~l~~~A~~~- 279 (343)
T TIGR03106 250 EH-------------------------------------------GVTIAMA----DS--SGPFDYHLTRKLIRLCQDH- 279 (343)
T ss_pred CC-------------------------------------------CceEEEe----cC--CCCCCHHHHHHHHHHHHHc-
Confidence 00 1111100 01 1123677888888888887
Q ss_pred CCcccccCCCCCCCchHHHHHhh---cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 355 GVQNIKENRPLMGTEDFSFFAEA---IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 355 g~~~~~~~~~~~g~tD~~~~~~~---ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
|.+.... ....|+||++.+... +|+..+++|.++ .|+ -|.++++++..+++++..++.
T Consensus 280 ~Ip~Q~~-~~~~~gtDa~~~~~~~~Gi~t~~i~iP~Ry--------~Hs-~e~~~~~D~~~~~~Ll~~~~~ 340 (343)
T TIGR03106 280 GIPHRRD-VFRYYRSDAASAVEAGHDIRTALVTFGLDA--------SHG-YERTHIDALEALANLLVAYAQ 340 (343)
T ss_pred CCCcEEE-ecCCCCChHHHHHHcCCCCCEEEeeccccc--------hhh-hhhccHHHHHHHHHHHHHHhc
Confidence 8865432 344579999987554 899988888665 899 999999999999999999873
No 69
>PF07687 M20_dimer: Peptidase dimerisation domain This family only corresponds to M20 family; InterPro: IPR011650 This domain consists of 4 beta strands and two alpha helices which make up the dimerisation surface of members of the MEROPS peptidase family M20 []. This family includes a range of zinc exopeptidases: carboxypeptidases, dipeptidases and specialised aminopeptidases [].; GO: 0016787 hydrolase activity; PDB: 3GB0_A 2F7V_A 1R3N_C 2VL1_D 2V8V_C 1R43_B 2V8G_B 2V8H_D 2V8D_A 3PFE_A ....
Probab=99.74 E-value=1.6e-17 Score=134.61 Aligned_cols=104 Identities=30% Similarity=0.369 Sum_probs=94.6
Q ss_pred ccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhcccC-----CCCCCceEEEEEEecCCCCccCCCcEEE
Q 014490 215 TLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREA-----DPLDSQVLTVAKFEGGGAFNIIPDSVTI 289 (423)
Q Consensus 215 ~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~-----~~~~~~t~~v~~i~gg~~~n~iP~~a~~ 289 (423)
+++|..+++|+++|+++|+|.|+.|+||+..+++++..|+.+..+.. ......+++++.++||...|+||++|++
T Consensus 2 g~~G~~~~~i~~~G~~~H~s~~~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~~~n~ip~~a~~ 81 (111)
T PF07687_consen 2 GHRGVIWFRITITGKSGHSSRPEKGVNAIEAAARFLNALEELEFEWAFRPEEFFPGPPTLNIGSIEGGTAPNVIPDEATL 81 (111)
T ss_dssp EEEEEEEEEEEEESBSEETTSGGGSBCHHHHHHHHHHHHHHTTCHBTSTHHHCTCTSEEEEEEEEEEESSTTEESSEEEE
T ss_pred cCCCEEEEEEEEEeeccCCCCccCccCHHHHHHHHHHHHHHhhcccccccccccccccceeEeecccCCcCCEECCEEEE
Confidence 35689999999999999999999999999999999999999864432 3456799999999999999999999999
Q ss_pred EEEEecCChhhHHHHHHHHHHHHHHHHHh
Q 014490 290 GGTFRAFSKESIIQLKQRIEEVVMKQASV 318 (423)
Q Consensus 290 ~~d~R~~~~~~~~~v~~~i~~~~~~~~~~ 318 (423)
++++|++|.++.+++.++|++++++.+.+
T Consensus 82 ~~~~R~~p~~~~~~i~~~i~~~~~~~~~~ 110 (111)
T PF07687_consen 82 TVDIRYPPGEDLEEIKAEIEAAVEKIAKK 110 (111)
T ss_dssp EEEEEESTCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCcchHHHHHHHHHHHHHHhhhC
Confidence 99999999999999999999999987764
No 70
>PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional
Probab=99.72 E-value=2.9e-16 Score=148.97 Aligned_cols=131 Identities=20% Similarity=0.219 Sum_probs=104.1
Q ss_pred HHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEec-------------------ccCceEEEEECCCCCcEEEE
Q 014490 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP-------------------VAVTGVVGYIGTGQPPFVAL 110 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~-------------------~~~~nvia~~~~~~~~~ill 110 (423)
+.+..+...+-..+..|..|.++++||.++|+++|++++.. ..+.||+|.+++...+.|++
T Consensus 35 ~~~~~ia~~~~gR~~gS~~E~~aA~yL~~~f~~lG~~v~~q~f~~~~~~~~~~g~~~~~~~~g~nVIa~~~G~~~~~Ill 114 (346)
T PRK10199 35 TQARHIATFFPGRMTGSPAEMLSADYLRQQFQQMGYQSDIRTFNSRYIYTARDNRKNWHNVTGSTVIAAHEGKAPQQIII 114 (346)
T ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHCCCceEeeeccccceeecccccccccCCccceEEEEECCCCCCeEEE
Confidence 45555666677777888889999999999999999987531 12367999997665689999
Q ss_pred EEecccccCcCCCCCcccCCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHhc
Q 014490 111 RADMDALAMEESVEWEHKSKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDA 185 (423)
Q Consensus 111 ~~H~Dtvp~~~~~~w~~~~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~~~~ 185 (423)
.||+|||+......|.+.. +.++++|+ |+|++++|+++++|++.+ ++.+|.|+++++|| |..|+++++++
T Consensus 115 ~AH~DTV~p~~~~~~~~~~---~g~~~~GA~DnasGvA~lLe~ar~l~~~~--~~~~I~fv~~~~EE~Gl~GS~~~~~~ 188 (346)
T PRK10199 115 MAHLDTYAPQSDADVDANL---GGLTLQGMDDNAAGLGVMLELAERLKNVP--TEYGIRFVATSGEEEGKLGAENLLKR 188 (346)
T ss_pred EEEcCcCCCCCCCccccCC---CCcccCCccccHHHHHHHHHHHHHHhhCC--CCCcEEEEEECCcccCcHHHHHHHHh
Confidence 9999999754334444332 22788998 699999999999998654 67899999999999 88999999886
No 71
>TIGR03107 glu_aminopep glutamyl aminopeptidase. This model represents the M42.001 clade within MEROPS family M42. M42 includes glutamyl aminopeptidase as in the present model, deblocking aminopeptidases as from Pyrococcus horikoshii and related species, and endo-1,4-beta-glucanase (cellulase M) as from Clostridium thermocellum. The current family includes
Probab=99.72 E-value=9.7e-16 Score=147.47 Aligned_cols=242 Identities=16% Similarity=0.156 Sum_probs=167.5
Q ss_pred HHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEecccCceEEEEECCC--CCcEEEEEEecccccC-----cC-----
Q 014490 54 NIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG--QPPFVALRADMDALAM-----EE----- 121 (423)
Q Consensus 54 ~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~~--~~~~ill~~H~Dtvp~-----~~----- 121 (423)
+++++|+++|++|+.|.++++++.++|++++.+++. +...|++|.++++ .+|+|+|.||||+|+. .+
T Consensus 2 ~~L~~L~~~~gpSG~E~~v~~~i~~~l~~~~~~v~~-D~~GNvia~~~g~~~~~~~vml~AHmDeVGf~V~~I~~~G~l~ 80 (350)
T TIGR03107 2 NKIKEVTELQGTSGFEHPIRDYLRQDITPLVDQVET-DGLGGIFGIKESQVENAPRVMVAAHMDEVGFMVSQIKPDGTFR 80 (350)
T ss_pred hHHHHHHhCCCCCCCcHHHHHHHHHHHHhhCCEEEE-CCCCCEEEEecCCCCCCCEEEEEecccEeCEEEEEECCCceEE
Confidence 468899999999999999999999999999988765 4577999988653 3589999999999932 11
Q ss_pred ---CCCCc------------------------------------------cc---------C------------------
Q 014490 122 ---SVEWE------------------------------------------HK---------S------------------ 129 (423)
Q Consensus 122 ---~~~w~------------------------------------------~~---------~------------------ 129 (423)
-.+|. ++ +
T Consensus 81 ~~~vGG~~~~~l~gq~V~i~t~~g~~i~GViG~~~~Hl~~~~~~~~~~~~~~~l~IDiGa~skee~~~~GI~vGd~v~~~ 160 (350)
T TIGR03107 81 VVELGGWNPLVVSSQRFTLFTRKGKKYPVISGSVPPHLLRGSSGGPQLPAVSDILFDGGFTNKDEAWSFGVRPGDVIVPQ 160 (350)
T ss_pred EEeCCCccccccCCcEEEEEeCCCCEEEEEEeCCcccccChhhcccccCChhhEEEEeCCCCHHHHHhcCCCCCCEEEEC
Confidence 01111 00 0
Q ss_pred -----C-CCCccccCCc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHhcCCCcccceeeeeccC
Q 014490 130 -----K-VPGKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVS 200 (423)
Q Consensus 130 -----~-~~g~~~grG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~~~~~~~~~~d~~i~~~~~ 200 (423)
. .++++.|+.- +.|+++++.+++.|++. +++.+++++|+++|| |..||+..... + +.|.+|+++..
T Consensus 161 ~~~~~~~~~~~i~~kalDdR~g~a~l~e~l~~l~~~--~~~~~l~~~~tvqEEvG~rGA~~aa~~--i-~pD~aI~vDv~ 235 (350)
T TIGR03107 161 TETILTANGKNVISKAWDNRYGVLMILELLESLKDQ--ELPNTLIAGANVQEEVGLRGAHVSTTK--F-NPDIFFAVDCS 235 (350)
T ss_pred CCeEEEcCCCEEEEeccccHHHHHHHHHHHHHhhhc--CCCceEEEEEEChhhcCchhhhhHHhh--C-CCCEEEEEecC
Confidence 0 1234555554 58999999999999865 478999999999999 88999976432 2 45666655421
Q ss_pred CCCCCceEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEecCCCC
Q 014490 201 SLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAF 280 (423)
Q Consensus 201 ~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gg~~~ 280 (423)
+ .+. .|... + ..+..
T Consensus 236 ~---~~d---------------------------~~~~~-~------------------------------~~lg~---- 250 (350)
T TIGR03107 236 P---AGD---------------------------IYGDQ-G------------------------------GKLGE---- 250 (350)
T ss_pred C---cCC---------------------------CCCCC-c------------------------------cccCC----
Confidence 1 000 01000 0 00111
Q ss_pred ccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCccccCHHHHHHHHHHHHHhcCCcccc
Q 014490 281 NIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIK 360 (423)
Q Consensus 281 n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~g~~~~~ 360 (423)
|.-+. . ... ....+..+.+.+.+++++. |.+...
T Consensus 251 ---------------------------------------Gp~i~--~--~D~--~~i~~~~l~~~l~~~A~~~-~I~~Q~ 284 (350)
T TIGR03107 251 ---------------------------------------GTLLR--F--FDP--GHIMLPRMKDFLLTTAEEA-GIKYQY 284 (350)
T ss_pred ---------------------------------------CceEE--E--ecC--CCCCCHHHHHHHHHHHHHc-CCCcEE
Confidence 11111 1 001 1234677888888888887 876632
Q ss_pred cCCCCCCCchHH--HHHhh-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 361 ENRPLMGTEDFS--FFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 361 ~~~~~~g~tD~~--~~~~~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
...+|+||++ ++... +|++.+++|.++ .|++.|.++++++.++++++.+++.
T Consensus 285 --~~~~gGtDa~~~~~~~~Gvpt~~i~ip~Ry--------~Hs~~e~i~~~D~~~~~~Ll~~~i~ 339 (350)
T TIGR03107 285 --YVAKGGTDAGAAHLKNSGVPSTTIGVCARY--------IHSHQTLYSIDDFLAAQAFLQAIVK 339 (350)
T ss_pred --ecCCCCchHHHHHHhCCCCcEEEEccCccc--------ccChhheeeHHHHHHHHHHHHHHHH
Confidence 4556789999 45544 999998888665 9999999999999999999999875
No 72
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism]
Probab=99.72 E-value=9.9e-16 Score=145.58 Aligned_cols=250 Identities=20% Similarity=0.203 Sum_probs=170.7
Q ss_pred HHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEecccCceEEEEECCCCC-cEEEEEEecccccC-----cC--
Q 014490 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQP-PFVALRADMDALAM-----EE-- 121 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~~~~-~~ill~~H~Dtvp~-----~~-- 121 (423)
+.+++++++|..+|++|+.|.++.+|+.++|++++.+++. +..+|+++++++.++ |.+++.||||++.. .+
T Consensus 2 ~~~~~~LkeL~~~~gpsG~E~eVr~~~~~el~~~~~ev~~-D~lGnlia~~~g~~g~~~imi~AHmDEiG~mV~~I~~~G 80 (355)
T COG1363 2 EELLELLKELLEAPGPSGYEEEVRDVLKEELEPLGDEVEV-DRLGNLIAKKGGKNGPPKVMIAAHMDEIGFMVKEIEDDG 80 (355)
T ss_pred hHHHHHHHHHHcCCCCCCcHHHHHHHHHHHHHHhCCceEE-cCCCcEEEEecCCCCCccEEEEeecceeeeeEEEECCCc
Confidence 5678899999999999999999999999999999999876 457799999987444 66999999999932 11
Q ss_pred ------CCCCccc-------------------------------C-----------------------------------
Q 014490 122 ------SVEWEHK-------------------------------S----------------------------------- 129 (423)
Q Consensus 122 ------~~~w~~~-------------------------------~----------------------------------- 129 (423)
-.+|... .
T Consensus 81 ~Lr~~~IGG~~~~~~~gq~v~i~t~~g~~i~GvIg~~p~H~~~~~~~~~~~~~~~el~iDiga~skeea~~lGI~vGd~v 160 (355)
T COG1363 81 FLRFVPIGGWDPQVLEGQRVTIHTDKGKKIRGVIGSKPPHLLKEEAERKKPPEWDELFIDIGASSKEEAEELGIRVGDFV 160 (355)
T ss_pred eEEEEEcCCcChhhccCcEEEEEeCCCcEEeeeEcccCccccCccccccCCCchhhEEEECCcCCHHHHHhcCCCCCCEE
Confidence 1123200 0
Q ss_pred --------CCCCccccCCc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHhcCCCcccceeeeec
Q 014490 130 --------KVPGKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLH 198 (423)
Q Consensus 130 --------~~~g~~~grG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~~~~~~~~~~d~~i~~~ 198 (423)
..++++-++.- +.+++++|.+++.| + +.+++.+++|+|+++|| |..||+..... -+.|.+|.++
T Consensus 161 ~~~~~~~~l~~~~i~skalDdR~gva~lle~lk~l-~-~~~~~~~vy~v~tvqEEVGlrGA~~~a~~---i~pd~aiavd 235 (355)
T COG1363 161 VFDPRFRELANGRVVSKALDDRAGVAALLELLKEL-K-GIELPADVYFVASVQEEVGLRGAKTSAFR---IKPDIAIAVD 235 (355)
T ss_pred EEcCceEEecCCcEEeeeccchHhHHHHHHHHHHh-c-cCCCCceEEEEEecchhhccchhhccccc---cCCCEEEEEe
Confidence 01233333332 68999999999999 4 66899999999999999 88999877432 1356666543
Q ss_pred cCCCCCCceEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEecCC
Q 014490 199 VSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGG 278 (423)
Q Consensus 199 ~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gg~ 278 (423)
..+ .+. .++. - .. .+.+..
T Consensus 236 ~~~---~~d---~~~~-----~---------~~---------------------------------------~~~lg~-- 254 (355)
T COG1363 236 VTP---AGD---TPGV-----P---------KG---------------------------------------DVKLGK-- 254 (355)
T ss_pred ccc---ccC---CCCC-----c---------cc---------------------------------------ccccCC--
Confidence 211 111 0000 0 00 000000
Q ss_pred CCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCccccCHHHHHHHHHHHHHhcCCcc
Q 014490 279 AFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQN 358 (423)
Q Consensus 279 ~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~g~~~ 358 (423)
|..+.+.. .+. ..++.+.+.+.+++++. +.+.
T Consensus 255 -----------------------------------------Gp~i~~~D---~~~---~~~~~l~~~L~~~A~~~-~Ip~ 286 (355)
T COG1363 255 -----------------------------------------GPVIRVKD---ASG---IYHPKLRKFLLELAEKN-NIPY 286 (355)
T ss_pred -----------------------------------------CCEEEEEc---CCC---CCCHHHHHHHHHHHHHc-CCCe
Confidence 11111111 011 12566777777777776 7765
Q ss_pred cccCCCCCCCchHHHHHhh---cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHhC
Q 014490 359 IKENRPLMGTEDFSFFAEA---IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATS 423 (423)
Q Consensus 359 ~~~~~~~~g~tD~~~~~~~---ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~~ 423 (423)
... ...+|+||++.+... +|+..+++|... .|+|.|.++++++..+.+++..++.+
T Consensus 287 Q~~-v~~~ggTDA~a~~~~g~gvpta~Igip~ry--------~Hs~~e~~~~~D~~~~~~Ll~~~i~~ 345 (355)
T COG1363 287 QVD-VSPGGGTDAGAAHLTGGGVPTALIGIPTRY--------IHSPVEVAHLDDLEATVKLLVAYLES 345 (355)
T ss_pred EEE-ecCCCCccHHHHHHcCCCCceEEEeccccc--------ccCcceeecHHHHHHHHHHHHHHHHh
Confidence 432 233488999987666 899988887554 89999999999999999999998863
No 73
>PRK09864 putative peptidase; Provisional
Probab=99.67 E-value=1.3e-14 Score=139.46 Aligned_cols=245 Identities=16% Similarity=0.116 Sum_probs=167.3
Q ss_pred HHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEecccCceEEEEECCCCCcEEEEEEecccccC-----cC------
Q 014490 53 VNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAM-----EE------ 121 (423)
Q Consensus 53 ~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~~~~~~ill~~H~Dtvp~-----~~------ 121 (423)
++++++|.++|++|+.|.++++++.++|+.++.++.. +..+|+++.. +.++++|+|.||||+|+. .+
T Consensus 3 ~~~L~~L~~~~g~SG~E~~v~~~l~~~l~~~~dev~~-D~~GNli~~~-g~~~~kvml~AHmDevG~mV~~I~~~G~l~~ 80 (356)
T PRK09864 3 IELLQQLCEASAVSGDEQEVRDILINTLEPCVNEITF-DGLGSFVARK-GNKGPKVAVVGHMDEVGFMVTHIDESGFLRF 80 (356)
T ss_pred HHHHHHHHcCCCCCCchHHHHHHHHHHHHHhCCEEEE-CCCCCEEEEe-CCCCcEEEEEecccccCEEEEEECCCCeEEE
Confidence 3568999999999999999999999999999998765 4577999987 333579999999999932 11
Q ss_pred --CCCCcc--------------------------------------------------cC--------------------
Q 014490 122 --SVEWEH--------------------------------------------------KS-------------------- 129 (423)
Q Consensus 122 --~~~w~~--------------------------------------------------~~-------------------- 129 (423)
-.+|.. ++
T Consensus 81 ~~lGG~~~~~l~~q~V~i~t~~g~~v~GVig~~~~H~~~~~~~~k~~~~~~l~IDiGa~s~ee~~~~GV~vGD~v~~~~~ 160 (356)
T PRK09864 81 TTIGGWWNQSMLNHRVTIRTHKGVKIPGVIGSVAPHALTEKQKQQPLSFDEMFIDIGANSREEVEKRGVEIGDFISPEAN 160 (356)
T ss_pred EeCCCcCccccCCCEEEEEeCCCCEEEEEEeCCccccCChhHcccCCChhHEEEEeCCCCHHHHHhcCCCCCCEEEECCC
Confidence 112210 00
Q ss_pred ---CCCCccccCCc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHhcCCCcccceeeeeccCCCC
Q 014490 130 ---KVPGKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLF 203 (423)
Q Consensus 130 ---~~~g~~~grG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~~~~~~~~~~d~~i~~~~~~~~ 203 (423)
..++++.|+.- +.|+++++.+++.+++ ++.+++++|+++|| |..||+..... + ++|.+|+++..+
T Consensus 161 ~~~l~~~~i~~kalDnR~g~~~lle~l~~l~~----~~~~vy~v~TvQEEvGlrGA~~aa~~--i-~PDiaIavDvt~-- 231 (356)
T PRK09864 161 FACWGEDKVVGKALDNRIGCAMMAELLQTVNN----PEITLYGVGSVEEEVGLRGAQTSAEH--I-KPDVVIVLDTAV-- 231 (356)
T ss_pred cEEEcCCEEEEEeCccHHHHHHHHHHHHHhhc----CCCeEEEEEEcchhcchHHHHHHHhc--C-CCCEEEEEeccc--
Confidence 01344555553 5899999999999964 77999999999999 88999977432 2 356666654211
Q ss_pred CCceEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEecCCCCccC
Q 014490 204 PVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNII 283 (423)
Q Consensus 204 p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gg~~~n~i 283 (423)
.+. .|... ..-..+.+..|.
T Consensus 232 -~~d---------------------------~p~~~---------------------------~~~~~~~lG~Gp----- 251 (356)
T PRK09864 232 -AGD---------------------------VPGID---------------------------NIKYPLKLGQGP----- 251 (356)
T ss_pred -CCC---------------------------CCCCc---------------------------ccccccccCCCC-----
Confidence 000 11000 000001111111
Q ss_pred CCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCccccCHHHHHHHHHHHHHhcCCcccccCC
Q 014490 284 PDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENR 363 (423)
Q Consensus 284 P~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~g~~~~~~~~ 363 (423)
-+. . ... ....++.+.+.+.+++++. |.+.... .
T Consensus 252 --------------------------------------~i~--~--~D~--~~i~~~~l~~~l~~~A~~~-~Ip~Q~~-~ 285 (356)
T PRK09864 252 --------------------------------------GLM--L--FDK--RYFPNQKLVAALKSCAAHN-DLPLQFS-T 285 (356)
T ss_pred --------------------------------------eEE--E--ccC--CccCCHHHHHHHHHHHHHc-CCCceEE-E
Confidence 111 0 000 1234677888888888887 8765332 3
Q ss_pred CCCCCchHHHHHhh---cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 364 PLMGTEDFSFFAEA---IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 364 ~~~g~tD~~~~~~~---ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
...|+||++.+... +|++.++++.++ .|+|.|-++++|+..+++++..++.
T Consensus 286 ~~~ggTDa~~i~~~~~Gvpt~~isiP~RY--------~Hs~~e~~~~~D~e~~~~Ll~~~~~ 339 (356)
T PRK09864 286 MKTGATDGGRYNVMGGGRPVVALCLPTRY--------LHANSGMISKADYDALLTLIRDFLT 339 (356)
T ss_pred cCCCCchHHHHHHhCCCCcEEEEeeccCc--------CCCcceEeEHHHHHHHHHHHHHHHH
Confidence 44479999987554 899988888665 8999999999999999999999875
No 74
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M42 (glutamyl aminopeptidase family, clan MH). For members of this family and family M28 the predicted metal ligands occur in the same order in the sequence: H, D, E, D/E, H; and the active site residues occur in the motifs HXD and EE. ; PDB: 2WYR_C 2CF4_A 1VHO_A 3ISX_A 3KL9_G 1YLO_F 3CPX_C 1VHE_A 2GRE_F 1XFO_A ....
Probab=98.87 E-value=4.6e-08 Score=92.37 Aligned_cols=69 Identities=20% Similarity=0.209 Sum_probs=51.4
Q ss_pred cCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhh---cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHH
Q 014490 338 NNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA---IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGA 414 (423)
Q Consensus 338 ~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~---ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~ 414 (423)
.+..+.+.+.+++++. |.+.... ....++||++.+... +|++.++++.++ .|++.|.++++++...+
T Consensus 221 ~~~~l~~~l~~~A~~~-~Ip~Q~~-~~~~ggTDa~~~~~~~~Gi~t~~i~iP~ry--------~Hs~~e~~~~~Di~~~~ 290 (292)
T PF05343_consen 221 PNPKLVDKLREIAEEN-GIPYQRE-VFSGGGTDAGAIQLSGGGIPTAVISIPCRY--------MHSPVEVIDLDDIEATI 290 (292)
T ss_dssp SHHHHHHHHHHHHHHT-T--EEEE-EESSSSSTHHHHHTSTTSSEEEEEEEEEBS--------TTSTTEEEEHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHc-CCCeEEE-ecCCcccHHHHHHHcCCCCCEEEEeccccc--------CCCcceEEEHHHHHHHh
Confidence 3456777777777776 6655332 456789999998754 788888888665 89999999999999887
Q ss_pred HH
Q 014490 415 AL 416 (423)
Q Consensus 415 ~~ 416 (423)
++
T Consensus 291 ~L 292 (292)
T PF05343_consen 291 DL 292 (292)
T ss_dssp HH
T ss_pred hC
Confidence 64
No 75
>KOG2194 consensus Aminopeptidases of the M20 family [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=98.57 E-value=3.3e-07 Score=95.08 Aligned_cols=133 Identities=20% Similarity=0.254 Sum_probs=94.1
Q ss_pred HHHHHHHHHhHhC-CCC--CC-CcHHHHHHHHHHHHhCCCC-------eEe-----------------cccCceEEEEEC
Q 014490 50 YWMVNIRRKIHEN-PEL--GF-QEFETSKLIRAELDQMGIP-------YKF-----------------PVAVTGVVGYIG 101 (423)
Q Consensus 50 ~~~~~~~~~l~~i-ps~--s~-~E~~~~~~l~~~l~~~g~~-------~~~-----------------~~~~~nvia~~~ 101 (423)
++.++.+.++.++ |.+ |. +|..+.+|+.+++.++.-. .+. -..-.||+.++.
T Consensus 57 ~rA~~~l~~ls~~G~~~~gS~~ne~~a~~~il~e~~~i~~~~~~~~~~~Evd~q~~sg~~~~~~~~~~Y~~i~NIvVki~ 136 (834)
T KOG2194|consen 57 ARALKDLLSLSAAGPHPVGSDNNEMHASSFILKEVNKIRKGSQSDLYDMEVDLQSASGSFILEGMTLVYQNISNIVVKIS 136 (834)
T ss_pred HHHHHHHHHHHhcCCcccCchhhHHHHHHHHHHHHHHHHhhhhcchhhheeceeeccceeeehhhhheeeeeeeEEEecC
Confidence 4455555566655 444 43 3568889999887665211 111 023568999995
Q ss_pred CCC---CcEEEEEEecccccCcCCCCCcccCCCCCccccCCch-HHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Cc
Q 014490 102 TGQ---PPFVALRADMDALAMEESVEWEHKSKVPGKMHACGHD-AHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG 176 (423)
Q Consensus 102 ~~~---~~~ill~~H~Dtvp~~~~~~w~~~~~~~g~~~grG~k-~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~ 176 (423)
++. .-.|++.+|+|+||.+ +|-|.+ .+++.+|++++.+.+....++.+|+|+|..+|| +.
T Consensus 137 ~k~~~~~~~lLlnaHfDSvpt~---------------~gAtDDg~~va~mLe~lRv~s~~~~~l~~~vVFLfNgaEE~~L 201 (834)
T KOG2194|consen 137 PKNGNDKNALLLNAHFDSVPTG---------------PGATDDGSGVASMLEALRVLSKSDKLLTHSVVFLFNGAEESGL 201 (834)
T ss_pred CCCCCccceeeeeccccccCCC---------------CCCCcchhHHHHHHHHHHHhhcCCCcccccEEEEecCcccchh
Confidence 442 2489999999999965 333444 489999999999999887789999999999999 88
Q ss_pred ccHHHHHhcC-CCcccceeeee
Q 014490 177 GGAKKMLDAG-ALENVEAIFGL 197 (423)
Q Consensus 177 ~Ga~~~~~~~-~~~~~d~~i~~ 197 (423)
.|+..++.+. ....+.+.+.+
T Consensus 202 ~gsH~FItQH~w~~~~ka~INL 223 (834)
T KOG2194|consen 202 LGSHAFITQHPWSKNIKAVINL 223 (834)
T ss_pred hhcccceecChhhhhhheEEec
Confidence 9999998743 33456666644
No 76
>PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain is found in metallopeptidases belonging to the MEROPS peptidase family M28 (aminopeptidase Y, clan MH) []. They also contain a transferrin receptor-like dimerisation domain (IPR007365 from INTERPRO) and a protease-associated PA domain (IPR003137 from INTERPRO).; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3BXM_A 2C6P_A 1Z8L_C 3SJF_A 3BHX_A 2C6G_A 3D7F_A 2XEG_A 3BI1_A 2C6C_A ....
Probab=98.27 E-value=1.6e-06 Score=76.14 Aligned_cols=80 Identities=29% Similarity=0.475 Sum_probs=58.5
Q ss_pred EEEEEEecccccCcCCCCCcccCCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHH
Q 014490 107 FVALRADMDALAMEESVEWEHKSKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKM 182 (423)
Q Consensus 107 ~ill~~H~Dtvp~~~~~~w~~~~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~ 182 (423)
.|++.||+|+++ +... + -++.|+ -.|++++|++++.|++.+..++++|+|+|..+|| |..|++++
T Consensus 2 ~ivi~aH~Ds~~-~~~~---------~-~~~~GA~DnasGva~lLelAr~l~~~~~~~~~~i~fv~~~~EE~gl~GS~~~ 70 (179)
T PF04389_consen 2 YIVIGAHYDSVG-GDAD---------G-SWSPGANDNASGVAALLELARVLKELKPQPKRTIRFVFFDGEEQGLLGSRAF 70 (179)
T ss_dssp EEEEEEE--BES-CCC----------T-CSSS-TTTTHHHHHHHHHHHHHHHHSTHSSSEEEEEEEESSGGGTSHHHHHH
T ss_pred EEEEEeecCCCC-CcCC---------C-cccCCcccchHHHHHHHHHHHHHHHhhcccCccEEEEEecccccCccchHHH
Confidence 589999999988 2211 2 366676 2799999999999999777788999999999999 89999999
Q ss_pred HhcC--CCcccceeeee
Q 014490 183 LDAG--ALENVEAIFGL 197 (423)
Q Consensus 183 ~~~~--~~~~~d~~i~~ 197 (423)
++.. ...++.++|.+
T Consensus 71 ~~~~~~~~~~~~~~inl 87 (179)
T PF04389_consen 71 VEHDHEELDNIAAVINL 87 (179)
T ss_dssp HHHHHCHHHHEEEEEEE
T ss_pred HHhhhcccccceeEEec
Confidence 9631 12234455544
No 77
>KOG3946 consensus Glutaminyl cyclase [Posttranslational modification, protein turnover, chaperones]
Probab=97.83 E-value=0.00055 Score=62.29 Aligned_cols=123 Identities=17% Similarity=0.191 Sum_probs=83.6
Q ss_pred HHHHHHHHHhHhCCCCCCC--cHHHHHHHHHHHHhCCCCeEec----------ccCceEEEEECCCCCcEEEEEEecccc
Q 014490 50 YWMVNIRRKIHENPELGFQ--EFETSKLIRAELDQMGIPYKFP----------VAVTGVVGYIGTGQPPFVALRADMDAL 117 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~~--E~~~~~~l~~~l~~~g~~~~~~----------~~~~nvia~~~~~~~~~ill~~H~Dtv 117 (423)
.++.+.+.-+ -+|.+-+. -.++.+||.+.|+.+|+.++.+ ..-.|+++........-+++.+|||+-
T Consensus 51 ~~~~~~L~p~-lv~Rvpgs~g~~~vr~~i~~~l~~l~w~ve~~~f~~~tp~g~~~f~nii~tl~~~A~r~lVlachydsk 129 (338)
T KOG3946|consen 51 NRLWENLLPI-LVPRVPGSPGSRQVRRFIIQHLRNLGWAVETDAFTDNTPLGTRNFNNLIATLDPNASRYLVLACHYDSK 129 (338)
T ss_pred HHHHHhhhhh-hccccCCCCccHHHHHHHHHHHHhcCceeeeccccccCcceeeeeeeEEEecCCCcchheeeecccccc
Confidence 5566664443 34444333 3889999999999999988762 113578998866655789999999996
Q ss_pred cCcCCCCCcccCCCCCc-cccCCchHHHHHHHHHHHHHHhccc----cCCceEEEEEecCCC--C-------cccHHHHH
Q 014490 118 AMEESVEWEHKSKVPGK-MHACGHDAHVAMLLGAAKMLQVFRH----EIKGTIVLVFQPAEE--G-------GGGAKKML 183 (423)
Q Consensus 118 p~~~~~~w~~~~~~~g~-~~grG~k~~~a~~l~a~~~l~~~~~----~~~~~i~~~~~~~EE--g-------~~Ga~~~~ 183 (423)
-... +. +-+-+...++|+++..+++|.+.-. ...-.+.++|..+|| . ..|++++.
T Consensus 130 ~~p~-----------~~~vgatdsAvpcamll~laq~l~~~~~~~~~~s~lsL~LvFFDGEEAf~eW~p~DSlYGsRhLA 198 (338)
T KOG3946|consen 130 IFPG-----------GMFVGATDSAVPCAMLLNLAQALDKILCSKVSASQLSLQLVFFDGEEAFEEWGPEDSLYGSRHLA 198 (338)
T ss_pred cCCC-----------cceEeeccccccHHHHHHHHHHHHHHHhcccCcCceeEEEEEeccHHHHhhcCCccccchHHHHH
Confidence 4321 22 2223335689999999988865321 234689999999999 2 26777775
Q ss_pred h
Q 014490 184 D 184 (423)
Q Consensus 184 ~ 184 (423)
+
T Consensus 199 ~ 199 (338)
T KOG3946|consen 199 A 199 (338)
T ss_pred H
Confidence 4
No 78
>KOG2526 consensus Predicted aminopeptidases - M20/M25/M40 family [Amino acid transport and metabolism]
Probab=97.01 E-value=0.011 Score=57.19 Aligned_cols=112 Identities=21% Similarity=0.310 Sum_probs=76.8
Q ss_pred HHHHHHHHhCCCCeEe---------cccCceEEEEECCC--------CCcEEEEEEecccccCcCCCCCcccCCCCCccc
Q 014490 74 KLIRAELDQMGIPYKF---------PVAVTGVVGYIGTG--------QPPFVALRADMDALAMEESVEWEHKSKVPGKMH 136 (423)
Q Consensus 74 ~~l~~~l~~~g~~~~~---------~~~~~nvia~~~~~--------~~~~ill~~H~Dtvp~~~~~~w~~~~~~~g~~~ 136 (423)
+.+..-+...|+.... ...-.|+.+++..+ .-|+|++.+|+||..+.+ | +
T Consensus 165 ~~ll~Tasangy~iv~sg~sp~a~~s~ki~nI~G~L~~glra~~dg~~lPtIaivA~ydtfgaap-----------~--l 231 (555)
T KOG2526|consen 165 QHLLQTASANGYSIVSSGQSPEAPPSYKILNIVGRLSSGLRAEGDGSALPTIAIVAHYDTFGAAP-----------G--L 231 (555)
T ss_pred HHHHhhhccCcEEEEecCCCcccCCCCccceEEeecccccccccccccCCeEEEEEeccccccCC-----------C--C
Confidence 4455555666776554 12346899998521 239999999999987654 2 3
Q ss_pred cCCc---hHHHHHHHHHHHHHHhcc----ccCCceEEEEEecCCC-CcccHHHHHhc---CCCcccceeeeec
Q 014490 137 ACGH---DAHVAMLLGAAKMLQVFR----HEIKGTIVLVFQPAEE-GGGGAKKMLDA---GALENVEAIFGLH 198 (423)
Q Consensus 137 grG~---k~~~a~~l~a~~~l~~~~----~~~~~~i~~~~~~~EE-g~~Ga~~~~~~---~~~~~~d~~i~~~ 198 (423)
-.|+ .+|+.++|+.++.+.+.- ...++++.|+.+.+-- .-.|.++-++. .+.+.+|+++|++
T Consensus 232 svgADSNGSGvvaLLelarlfSkly~ypsTrakYnLlF~lt~aG~lNyqGTkkWLe~dd~~lq~nVdfaiCLd 304 (555)
T KOG2526|consen 232 SVGADSNGSGVVALLELARLFSKLYDYPSTRAKYNLLFILTAAGKLNYQGTKKWLEFDDADLQKNVDFAICLD 304 (555)
T ss_pred CCCCCCCCccHHHHHHHHHHHHHHhcCcccccceeEEEEEccCccccccchhhhhhcchHHHHhcccEEEEhh
Confidence 3344 357889999998887532 2468999999998887 55787776652 2334788999875
No 79
>COG2234 Iap Predicted aminopeptidases [General function prediction only]
Probab=96.75 E-value=0.0036 Score=63.06 Aligned_cols=44 Identities=32% Similarity=0.243 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHhcCC
Q 014490 142 AHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGA 187 (423)
Q Consensus 142 ~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~~~~~~ 187 (423)
.|++++|++++.|++.. ++.+|.|++...|| |+.|+++++.+..
T Consensus 231 sGva~llEiAr~l~~~~--p~~~v~f~~~~aEE~Gl~GS~~~~~~~~ 275 (435)
T COG2234 231 SGVAALLELARVLKGNP--PKRTVRFVAFGAEESGLLGSEAYVKRLS 275 (435)
T ss_pred HHHHHHHHHHHHHhcCC--CCceEEEEEecchhhcccccHHHHhcCC
Confidence 69999999999999876 89999999999999 9999999988654
No 80
>KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only]
Probab=96.29 E-value=0.012 Score=61.89 Aligned_cols=77 Identities=22% Similarity=0.308 Sum_probs=58.8
Q ss_pred CceEEEEECCC--CCcEEEEEEecccccCcCCCCCcccCCCCCccccCCchHHHHHHHHHHHHH---HhccccCCceEEE
Q 014490 93 VTGVVGYIGTG--QPPFVALRADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKML---QVFRHEIKGTIVL 167 (423)
Q Consensus 93 ~~nvia~~~~~--~~~~ill~~H~Dtvp~~~~~~w~~~~~~~g~~~grG~k~~~a~~l~a~~~l---~~~~~~~~~~i~~ 167 (423)
-.||+|.+.|. ++.-|++.+|.|..-.| .++ ...|++.++...+++ ++.+.+|.++|+|
T Consensus 338 i~NIig~I~Gs~epD~~ViigahrDSw~~G-------------a~d---p~sGta~Ll~i~~~~~~~~k~gwrP~RtI~F 401 (702)
T KOG2195|consen 338 IQNIIGKIEGSEEPDRYVIIGAHRDSWTFG-------------AID---PNSGTALLLEIARALSKLKKRGWRPRRTILF 401 (702)
T ss_pred eeeEEEEEecCcCCCeEEEEeccccccccC-------------CcC---CCccHHHHHHHHHHHHHHHHcCCCccceEEE
Confidence 46999999764 46899999999885422 111 034577777776654 5678899999999
Q ss_pred EEecCCC-CcccHHHHHhc
Q 014490 168 VFQPAEE-GGGGAKKMLDA 185 (423)
Q Consensus 168 ~~~~~EE-g~~Ga~~~~~~ 185 (423)
+.-.+|| |..|+.++++.
T Consensus 402 ~sWdAeEfGliGStE~~E~ 420 (702)
T KOG2195|consen 402 ASWDAEEFGLLGSTEWAEE 420 (702)
T ss_pred EEccchhccccccHHHHHH
Confidence 9999999 88999999875
No 81
>PF05450 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastrin and presenilin are two major components of the gamma-secretase complex, which executes the intramembrane proteolysis of type I integral membrane proteins such as the amyloid precursor protein (APP) and Notch. Nicastrin is synthesised in fibroblasts and neurons as an endoglycosidase-H-sensitive glycosylated precursor protein (immature nicastrin) and is then modified by complex glycosylation in the Golgi apparatus and by sialylation in the trans-Golgi network (mature nicastrin) [].; GO: 0016485 protein processing, 0016021 integral to membrane
Probab=95.94 E-value=0.073 Score=48.64 Aligned_cols=66 Identities=20% Similarity=0.319 Sum_probs=52.1
Q ss_pred cEEEEEEecccccCcCCCCCcccCCCCCccccCCc---hHHHHHHHHHHHHHHhc---cccCCceEEEEEecCCC-Cccc
Q 014490 106 PFVALRADMDALAMEESVEWEHKSKVPGKMHACGH---DAHVAMLLGAAKMLQVF---RHEIKGTIVLVFQPAEE-GGGG 178 (423)
Q Consensus 106 ~~ill~~H~Dtvp~~~~~~w~~~~~~~g~~~grG~---k~~~a~~l~a~~~l~~~---~~~~~~~i~~~~~~~EE-g~~G 178 (423)
|.|+..+.||+...-+ +. +.|+ -.|++++|+++++|.+. ...++++|.|+|..+|- +-.|
T Consensus 1 ~iIlv~armDs~s~F~-----------~~--s~GA~s~~sglvaLLaaA~aL~~~~~~~~~~~knV~F~~F~GEs~dYiG 67 (234)
T PF05450_consen 1 PIILVVARMDSFSFFH-----------DL--SPGADSSVSGLVALLAAAEALSKLLPDSSNLNKNVLFAFFNGESFDYIG 67 (234)
T ss_pred CEEEEEecccchhccc-----------CC--CCCcccchHHHHHHHHHHHHHHHhhhccccccCcEEEEEecCccccccc
Confidence 6789999999976422 22 4565 37999999999999865 23578999999999999 7789
Q ss_pred HHHHHh
Q 014490 179 AKKMLD 184 (423)
Q Consensus 179 a~~~~~ 184 (423)
++.|+.
T Consensus 68 S~R~vy 73 (234)
T PF05450_consen 68 SSRFVY 73 (234)
T ss_pred hHHHHH
Confidence 998864
No 82
>PF00883 Peptidase_M17: Cytosol aminopeptidase family, catalytic domain; InterPro: IPR000819 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to the MEROPS peptidase family M17 (leucyl aminopeptidase family, clan MF), the type example being leucyl aminopeptidase from Bos taurus (Bovine). Aminopeptidases are exopeptidases involved in the processing and regular turnover of intracellular proteins, although their precise role in cellular metabolism is unclear [, ]. Leucine aminopeptidases cleave leucine residues from the N-terminal of polypeptide chains, but substantial rates are evident for all amino acids []. The enzymes exist as homo-hexamers, comprising 2 trimers stacked on top of one another []. Each monomer binds 2 zinc ions and folds into 2 alpha/beta-type quasi-spherical globular domains, producing a comma-like shape []. The N-terminal 150 residues form a 5-stranded beta-sheet with 4 parallel and 1 anti-parallel strand sandwiched between 4 alpha-helices []. An alpha-helix extends into the C-terminal domain, which comprises a central 8-stranded saddle-shaped beta-sheet sandwiched between groups of helices, forming the monomer hydrophobic core []. A 3-stranded beta-sheet resides on the surface of the monomer, where it interacts with other members of the hexamer []. The 2 zinc ions and the active site are entirely located in the C-terminal catalytic domain [].; GO: 0004177 aminopeptidase activity, 0006508 proteolysis, 0005622 intracellular; PDB: 3KZW_L 3KQX_C 3KQZ_L 3KR4_I 3KR5_J 3T8W_C 3H8F_D 3H8G_A 3H8E_B 3IJ3_A ....
Probab=94.61 E-value=0.47 Score=45.04 Aligned_cols=110 Identities=19% Similarity=0.190 Sum_probs=71.0
Q ss_pred HHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEec------c--------------cCce-EEEEECC-C--CCcEE
Q 014490 53 VNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP------V--------------AVTG-VVGYIGT-G--QPPFV 108 (423)
Q Consensus 53 ~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~------~--------------~~~n-via~~~~-~--~~~~i 108 (423)
+.+.|+|+.-|.---.....++++++.++++|++++.. . ..|. ++.++.+ + ..++|
T Consensus 1 vn~aRdL~n~P~n~~~P~~~a~~~~~~~~~~~v~v~v~~~~~l~~~gmg~llaVg~gS~~~P~lv~l~Y~g~~~~~~~~i 80 (311)
T PF00883_consen 1 VNLARDLVNTPPNILTPETFAEYAKELAKKYGVKVEVLDEKELEKLGMGGLLAVGRGSRHPPRLVVLEYKGNGGKSKKPI 80 (311)
T ss_dssp HHHHHHHHHS-TTTSSHHHHHHHHHHHHHHCTEEEEEEEHHHHHHTT-HHHHHHHTTSSS--EEEEEEEETSTSTTSEEE
T ss_pred ChHHHhhhCCChhhcCHHHHHHHHHHHHhhcCCEEEEEeHHHHHHcCCccEeeecccCCCCCEEEEEEECCCCCCCCccE
Confidence 45789999999877777899999999999999887661 0 1122 3333322 2 23556
Q ss_pred EEEEecccccCcCCCCCcccC-----CCCCcccc-CCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 014490 109 ALRADMDALAMEESVEWEHKS-----KVPGKMHA-CGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (423)
Q Consensus 109 ll~~H~Dtvp~~~~~~w~~~~-----~~~g~~~g-rG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE 174 (423)
.|.|- +.+|++ +..+.|.+ ++.++|.|+.+++++++.+.+ ++.+|..++...|=
T Consensus 81 ~LVGK----------GiTFDtGG~~lKp~~~M~~Mk~DM~GAAaV~ga~~aia~lk--~~vnV~~~l~~~EN 140 (311)
T PF00883_consen 81 ALVGK----------GITFDTGGLSLKPSGGMEGMKYDMGGAAAVLGAMRAIAKLK--LPVNVVAVLPLAEN 140 (311)
T ss_dssp EEEEE----------EEEEEE-TTSSSCSTTGGGGGGGGHHHHHHHHHHHHHHHCT---SSEEEEEEEEEEE
T ss_pred EEEcc----------eEEEecCCccCCCCcchhhcccCcchHHHHHHHHHHHHHcC--CCceEEEEEEcccc
Confidence 66543 222331 22233443 333699999999999999865 77889888887764
No 83
>PRK00913 multifunctional aminopeptidase A; Provisional
Probab=94.51 E-value=0.58 Score=47.36 Aligned_cols=124 Identities=15% Similarity=0.137 Sum_probs=80.0
Q ss_pred hhHHHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEe-------cccCceEEEEECCC-CCcEEEEEEeccc--
Q 014490 47 EIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKF-------PVAVTGVVGYIGTG-QPPFVALRADMDA-- 116 (423)
Q Consensus 47 ~~~~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~-------~~~~~nvia~~~~~-~~~~ill~~H~Dt-- 116 (423)
+...+-+.+.|+|++.|.---.....++++.+.++++|++++. ..+.+.+++.=+++ ..|.++..-+.-.
T Consensus 168 ~~~a~~~~~aRdL~n~P~n~~tP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~GS~~~prli~l~Y~g~~~ 247 (483)
T PRK00913 168 EAIAEGVNLARDLVNEPPNILTPAYLAERAKELAKEYGLEVEVLDEKEMEKLGMGALLAVGQGSANPPRLIVLEYKGGKK 247 (483)
T ss_pred HHHHHHHHHHHHhhCCChhhcCHHHHHHHHHHHHHhcCCEEEEEeHHHHHhCCCCcEEEEeccCCCCCeEEEEEECCCCC
Confidence 3446778899999999986666688899999999999999876 12233444443333 3466665444311
Q ss_pred --ccCcCCCCCcccC-----CCCCcccc-CCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 014490 117 --LAMEESVEWEHKS-----KVPGKMHA-CGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (423)
Q Consensus 117 --vp~~~~~~w~~~~-----~~~g~~~g-rG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE 174 (423)
+-+| .+.+|++ +....|.+ ++..+|.|+.+++++++.+.+ ++.+|..++...|=
T Consensus 248 ~i~LVG--KGITFDsGG~slKp~~~M~~MK~DM~GAAaVlga~~aia~lk--l~vnV~~v~~l~EN 309 (483)
T PRK00913 248 PIALVG--KGLTFDSGGISLKPAAGMDEMKYDMGGAAAVLGTMRALAELK--LPVNVVGVVAACEN 309 (483)
T ss_pred eEEEEc--CceEecCCCccCCCCcChhhcccccHhHHHHHHHHHHHHHcC--CCceEEEEEEeecc
Confidence 1111 1233441 11122332 222599999999999999865 78899999888775
No 84
>cd00433 Peptidase_M17 Cytosol aminopeptidase family, N-terminal and catalytic domains. Family M17 contains zinc- and manganese-dependent exopeptidases ( EC 3.4.11.1), including leucine aminopeptidase. They catalyze removal of amino acids from the N-terminus of a protein and play a key role in protein degradation and in the metabolism of biologically active peptides. They do not contain HEXXH motif (which is used as one of the signature patterns to group the peptidase families) in the metal-binding site. The two associated zinc ions and the active site are entirely enclosed within the C-terminal catalytic domain in leucine aminopeptidase. The enzyme is a hexamer, with the catalytic domains clustered around the three-fold axis, and the two trimers related to one another by a two-fold rotation. The N-terminal domain is structurally similar to the ADP-ribose binding Macro domain. This family includes proteins from bacteria, archaea, animals and plants.
Probab=93.97 E-value=1.1 Score=45.41 Aligned_cols=125 Identities=14% Similarity=0.133 Sum_probs=79.6
Q ss_pred hHHHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEec-------ccCceEEEEECCC-CCcEEEEEEecccccC
Q 014490 48 IFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP-------VAVTGVVGYIGTG-QPPFVALRADMDALAM 119 (423)
Q Consensus 48 ~~~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~-------~~~~nvia~~~~~-~~~~ill~~H~Dtvp~ 119 (423)
.+.+-+.+.|+|++-|.---.....++++.+.+++.|++++.- .+.+.+++.=+++ ..|.++..-+...-+.
T Consensus 152 ~~a~~~~~aRdL~n~P~n~~tP~~~a~~a~~l~~~~g~~v~V~~~~~l~~~gmg~~laVg~GS~~~p~lv~l~Y~g~~~~ 231 (468)
T cd00433 152 AIAEGVNLARDLVNTPANDLTPTYLAEEAKELAKELGVKVEVLDEKELEELGMGALLAVGKGSEEPPRLIVLEYKGKGAS 231 (468)
T ss_pred HHHHHHHHHHHhhcCCcccCCHHHHHHHHHHHHHhcCCEEEEEcHHHHHhCCCCceeeecccCCCCCEEEEEEECCCCCC
Confidence 4467888999999999866666889999999999999998761 2333444443333 3466665544322110
Q ss_pred cC-----CCCCcccC----CC-CCcccc-CCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 014490 120 EE-----SVEWEHKS----KV-PGKMHA-CGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (423)
Q Consensus 120 ~~-----~~~w~~~~----~~-~g~~~g-rG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE 174 (423)
.. -.+.+|++ .+ ...|.+ +..++|.|+.+++++++.+.+ ++.+|..++...|=
T Consensus 232 ~~~i~LVGKGiTFDsGG~slKp~~~M~~Mk~DM~GAAaVlga~~aia~l~--~~vnV~~i~~~~EN 295 (468)
T cd00433 232 KKPIALVGKGITFDTGGLSLKPAAGMDGMKYDMGGAAAVLGAMKAIAELK--LPVNVVGVLPLAEN 295 (468)
T ss_pred CCcEEEEcCceEecCCCccccCccChhhccccchhHHHHHHHHHHHHHcC--CCceEEEEEEeeec
Confidence 00 01222331 11 112222 112599999999999999876 78899988887775
No 85
>PTZ00412 leucyl aminopeptidase; Provisional
Probab=92.10 E-value=2.6 Score=43.11 Aligned_cols=122 Identities=16% Similarity=0.090 Sum_probs=76.0
Q ss_pred hHHHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeE-e-------cccCceEEEEECCCC-CcEEEEEEeccccc
Q 014490 48 IFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYK-F-------PVAVTGVVGYIGTGQ-PPFVALRADMDALA 118 (423)
Q Consensus 48 ~~~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~-~-------~~~~~nvia~~~~~~-~~~ill~~H~Dtvp 118 (423)
...+-+.+.|+|++-|.---.....++++.+.+.+.|++++ . ..+.+.+++.=.++. .|.++...+ . |
T Consensus 210 ~ia~~vn~ARdLvn~P~N~ltP~~~Ae~a~~~~~~~g~~v~~Vl~~~~l~~~gmg~llaVgkGS~~pPrli~L~Y-~--g 286 (569)
T PTZ00412 210 IIGHCVNEARNLGNLREDEGVPQFYAEWIKKELAPLGIKVRKVLRGEQLEGAGLNLMYNVGKGSRHEPYLVVFEY-I--G 286 (569)
T ss_pred HHHHHHHHHHHhccCChhhcCHHHHHHHHHHHHhhcCCEEEEEEcHHHHHHCCCcceeeeeccCCCCCEEEEEEe-C--C
Confidence 44667789999999888655667788999888888999986 3 123344555444443 355554433 2 2
Q ss_pred CcCC--------CCCcccC----CC-CCcccc-CCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 014490 119 MEES--------VEWEHKS----KV-PGKMHA-CGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (423)
Q Consensus 119 ~~~~--------~~w~~~~----~~-~g~~~g-rG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE 174 (423)
..+. .+.+|++ .+ .+.|.. ++..+|.|+.+++++++.+.+ ++.+|..++...|=
T Consensus 287 ~~~~~~~iaLVGKGITFDSGGisLKP~~~M~~MK~DMgGAAaVlga~~AiA~Lk--lpvnVv~iiplaEN 354 (569)
T PTZ00412 287 NPRSSAATALVGKGVTFDCGGLNIKPYGSMETMHSDMMGAATVMCTLKAIAKLQ--LPVNVVAAVGLAEN 354 (569)
T ss_pred CCCCCCcEEEEcCceEEcCCCCCCCCccChhhhhccchhHHHHHHHHHHHHHcC--CCeEEEEEEEhhhc
Confidence 1111 1222331 11 112222 222589999999999998765 77899888887775
No 86
>PRK02256 putative aminopeptidase 1; Provisional
Probab=91.75 E-value=0.22 Score=50.15 Aligned_cols=76 Identities=11% Similarity=-0.011 Sum_probs=59.3
Q ss_pred cCHHHHHHHHHHHHHhcCCcccccCC----CCCCCchHHHHHhh-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHH
Q 014490 338 NNKNLHEHFQKVAADMLGVQNIKENR----PLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPY 412 (423)
Q Consensus 338 ~d~~~~~~l~~~~~~~~g~~~~~~~~----~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~ 412 (423)
.+..+...+++.+++. |.+...... ..+|+||+..+.+. +|++-+|++... .|++.|-++.+|+..
T Consensus 380 ~~~~~~~~i~~iA~~~-~Ip~Q~~~~~r~d~~~GgTig~~~s~~Gi~tvdiGiP~l~--------MHS~rE~~~~~D~~~ 450 (462)
T PRK02256 380 ANAEFVAEVRNLFNKN-NVVWQTAELGKVDQGGGGTIAKFLANYGMEVIDCGVALLS--------MHSPFEIASKADIYE 450 (462)
T ss_pred CCHHHHHHHHHHHHHc-CCCEEEEEeecCCCCCcChHHHHHcCCCCcEEEechhhhc--------cccHHHHhhHHHHHH
Confidence 3777888899999887 876432111 23679997777755 998888777544 899999999999999
Q ss_pred HHHHHHHHHh
Q 014490 413 GAALHASLAT 422 (423)
Q Consensus 413 ~~~~~~~~i~ 422 (423)
.++++..++.
T Consensus 451 ~~~ll~~f~~ 460 (462)
T PRK02256 451 TYKAYKAFLE 460 (462)
T ss_pred HHHHHHHHHh
Confidence 9999998875
No 87
>PRK05015 aminopeptidase B; Provisional
Probab=91.74 E-value=3.6 Score=40.70 Aligned_cols=120 Identities=13% Similarity=0.115 Sum_probs=72.0
Q ss_pred HHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhC---CCCeEe------cccC-ceEEEEECCCC-CcEEEEEEeccccc
Q 014490 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQM---GIPYKF------PVAV-TGVVGYIGTGQ-PPFVALRADMDALA 118 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~---g~~~~~------~~~~-~nvia~~~~~~-~~~ill~~H~Dtvp 118 (423)
-+.+.+.|+|++-|.---.....++...++++++ +++++. ...+ ..+++.=+++. .|.++ |+|--|
T Consensus 100 ~~~~~~aRdLvn~P~n~ltP~~lA~~a~~~~~~~~~~~v~v~Vl~~~~L~~~gmggilaVgrGS~~pP~lv---~L~Y~~ 176 (424)
T PRK05015 100 LKIIDWVRDTINAPAEELGPEQLAQRAADLICSVAGDAVSYRIIKGEDLREQGYMGIHTVGRGSERPPVLL---ALDYNP 176 (424)
T ss_pred HHHHHHHHHHhcCCcccCCHHHHHHHHHHHHHhhccCceEEEEeeHHHHHHCCCCceeeeeccCCCCCEEE---EEEecC
Confidence 4567889999999986656677788888888776 466655 1223 33444433333 35555 233234
Q ss_pred CcCCC----------CCcccC----CC-CCcccc-CCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 014490 119 MEESV----------EWEHKS----KV-PGKMHA-CGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (423)
Q Consensus 119 ~~~~~----------~w~~~~----~~-~g~~~g-rG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE 174 (423)
.++.+ +.+|++ .+ .+.|.+ +...+|.|+.+++++++.+.+ ++.+|..++...|=
T Consensus 177 ~g~~~~~v~~aLVGKGITFDSGG~sLKps~~M~~MK~DMgGAAaV~ga~~~a~~~~--l~~nV~~il~~aEN 246 (424)
T PRK05015 177 TGDPDAPVYACLVGKGITFDSGGYSIKPSAGMDSMKSDMGGAATVTGALALAITRG--LNKRVKLFLCCAEN 246 (424)
T ss_pred CCCCCCCeeEEEecCceEecCCCccCCCCcCHHHhhcchhHHHHHHHHHHHHHhcC--CCceEEEEEEeccc
Confidence 33211 112331 11 111221 112489999999998887765 78899999998886
No 88
>KOG2597 consensus Predicted aminopeptidase of the M17 family [General function prediction only]
Probab=91.48 E-value=2 Score=43.32 Aligned_cols=123 Identities=13% Similarity=0.102 Sum_probs=78.9
Q ss_pred HHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEec------ccCceEEEEE-CCC-CCcEEEEEEecccccCcC
Q 014490 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP------VAVTGVVGYI-GTG-QPPFVALRADMDALAMEE 121 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~------~~~~nvia~~-~~~-~~~~ill~~H~Dtvp~~~ 121 (423)
...+.+.|+|..-|.---.-...++++.+++...|.+++.. ...-|.+..+ .++ ..|.++.+.|.++-|...
T Consensus 189 ~~~~~lar~l~d~PaN~Mtp~~fae~a~~~~~~~~v~v~V~~~~~i~~~~~~~~l~V~k~s~~pP~ll~lsY~g~~~~~~ 268 (513)
T KOG2597|consen 189 AAAQNLARRLGDTPANRMTPTQFAEEAVDVLCPLGVTVEVRDEEWIEEQGMNSFLAVAKASCEPPRLLELSYKGTSGADK 268 (513)
T ss_pred HHHHHHHHHhccCChhhcCHHHHHHHHHHhhcccCceEEEechHHHhhccccceeeeccccCCCCEEEEEEEcCCCCCcc
Confidence 55667778887777644455788999999999999877651 1222333333 333 347777787776644321
Q ss_pred C-----CCCcccC-----CCCCcccc-CCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 014490 122 S-----VEWEHKS-----KVPGKMHA-CGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (423)
Q Consensus 122 ~-----~~w~~~~-----~~~g~~~g-rG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE 174 (423)
. .+.+|++ +....|.+ |+.++|.|+.++++++..+.+ ++-++.+++.-.|-
T Consensus 269 ~i~lvGKGvtfDsGGl~iK~~~~M~~mr~dm~GAA~v~~~~~a~~~l~--~~in~~~v~plcEN 330 (513)
T KOG2597|consen 269 TILLVGKGVTFDSGGLSIKPKTGMDGMRRDMGGAAVVLGAFRAAAQLS--LPINVHAVLPLCEN 330 (513)
T ss_pred eEEEEecceEEecCccccccCCChhhhhhhccccHHHHHHHHHHHhcC--CCCceEEEEeeecc
Confidence 1 1222331 12223443 455789999999999998765 66888888887776
No 89
>PRK02813 putative aminopeptidase 2; Provisional
Probab=88.32 E-value=0.75 Score=46.09 Aligned_cols=76 Identities=11% Similarity=-0.046 Sum_probs=57.2
Q ss_pred cCHHHHHHHHHHHHHhcCCcccccC--CCCCCCchHHHHHh--h-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHH
Q 014490 338 NNKNLHEHFQKVAADMLGVQNIKEN--RPLMGTEDFSFFAE--A-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPY 412 (423)
Q Consensus 338 ~d~~~~~~l~~~~~~~~g~~~~~~~--~~~~g~tD~~~~~~--~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~ 412 (423)
.|......+++.+++. |.+..... ...+|++|++.+.. . +|++-++++... .|++.|-++.+|+..
T Consensus 346 t~~~~~a~~~~ia~~~-~Ip~Q~~v~~~d~~gGstig~i~~s~~Gi~tvdiGiP~l~--------MHS~~E~~~~~D~~~ 416 (428)
T PRK02813 346 TDAESAAVFKLLCEKA-GVPYQEFVNRSDMPCGSTIGPITAARLGIRTVDVGAPMLA--------MHSARELAGVKDHAY 416 (428)
T ss_pred cCHHHHHHHHHHHHHc-CCCEEEEEecCCCCCccHHHHHHHhCCCCcEEEeChhhcc--------cccHHHHccHHHHHH
Confidence 4677888899999887 87543211 12246777777654 2 888877776543 899999999999999
Q ss_pred HHHHHHHHHh
Q 014490 413 GAALHASLAT 422 (423)
Q Consensus 413 ~~~~~~~~i~ 422 (423)
.++++..|+.
T Consensus 417 ~~~l~~~f~~ 426 (428)
T PRK02813 417 LIKALTAFFS 426 (428)
T ss_pred HHHHHHHHhc
Confidence 9999998864
No 90
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=86.39 E-value=1.3 Score=45.21 Aligned_cols=44 Identities=11% Similarity=0.077 Sum_probs=39.7
Q ss_pred CCceEEEEEEecCCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHH
Q 014490 265 DSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMK 314 (423)
Q Consensus 265 ~~~t~~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~ 314 (423)
...|+|++.++++ |++|.+.+++|++|.++++++.++++++++.
T Consensus 336 ~~~t~n~g~i~~~------~~~~~~~i~~R~~~~~~~~~i~~~i~~~~~~ 379 (477)
T TIGR01893 336 VESSLNLGVVKTK------ENKVIFTFLIRSSVESDKDYVTEKIESIAKL 379 (477)
T ss_pred EEeeeeEEEEEEc------CCEEEEEEEeCCCCchhHHHHHHHHHHHhhh
Confidence 4578999999876 7889999999999999999999999999884
No 91
>PTZ00371 aspartyl aminopeptidase; Provisional
Probab=84.38 E-value=1.7 Score=44.04 Aligned_cols=77 Identities=10% Similarity=-0.089 Sum_probs=58.0
Q ss_pred ccCHHHHHHHHHHHHHhcCCcccc--cCCCCCCCchHHHHHh--h-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchH
Q 014490 337 VNNKNLHEHFQKVAADMLGVQNIK--ENRPLMGTEDFSFFAE--A-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALP 411 (423)
Q Consensus 337 ~~d~~~~~~l~~~~~~~~g~~~~~--~~~~~~g~tD~~~~~~--~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~ 411 (423)
..|..+...+++.+++. |.+... .....+|++|++.+.. . +|++-+|++... .|++.|-++.+|+.
T Consensus 372 ~td~~~~a~i~~la~~~-~Ip~Q~~~~~~d~~~GsTig~i~~s~~Gi~tvDiGiP~l~--------MHS~rE~~~~~D~~ 442 (465)
T PTZ00371 372 ATNGVTASLLKAIAKKA-NIPIQEFVVKNDSPCGSTIGPILSSNLGIRTVDIGIPQLA--------MHSIREMCGVVDIY 442 (465)
T ss_pred ccCHHHHHHHHHHHHHc-CCCEEEEEecCCCCCcchHHHHHHhCCCCcEEEechhhcc--------cccHHHHccHHHHH
Confidence 35688999999999987 875432 1123445777777654 3 888877776543 89999999999999
Q ss_pred HHHHHHHHHHh
Q 014490 412 YGAALHASLAT 422 (423)
Q Consensus 412 ~~~~~~~~~i~ 422 (423)
..++++..++.
T Consensus 443 ~~~~l~~af~~ 453 (465)
T PTZ00371 443 YLVKLIKAFFT 453 (465)
T ss_pred HHHHHHHHHHH
Confidence 99999998864
No 92
>COG0260 PepB Leucyl aminopeptidase [Amino acid transport and metabolism]
Probab=83.63 E-value=19 Score=36.59 Aligned_cols=121 Identities=17% Similarity=0.182 Sum_probs=72.7
Q ss_pred hHHHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCC-CCeEe-------cccCceEEEEECCC-CCcEEEEEEeccccc
Q 014490 48 IFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMG-IPYKF-------PVAVTGVVGYIGTG-QPPFVALRADMDALA 118 (423)
Q Consensus 48 ~~~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g-~~~~~-------~~~~~nvia~~~~~-~~~~ill~~H~Dtvp 118 (423)
.+-+.+.+.|+|++.|.---.....++. ++.|.+.+ ++++. ..+.+.+++.=+++ ..|.++ |++=-+
T Consensus 165 ai~~~v~~aRdLvN~P~n~l~P~~la~~-a~~la~~~~v~veVl~~~~l~~~gmg~llaVg~GS~~~Prli---vl~y~g 240 (485)
T COG0260 165 AIAEGVNLARDLVNTPANILTPEELAER-AELLAKLGGVKVEVLDEKDLEKLGMGALLAVGKGSARPPRLI---VLEYNG 240 (485)
T ss_pred HHHHHHHHHHHHhhCCcccCCHHHHHHH-HHHHhhcCCceEEEecHHHHHHcCCceeeeeccCCCCCCeEE---EEEcCC
Confidence 3466788999999999876666777788 77777765 77665 12334455543333 246555 222222
Q ss_pred CcCC--------CCCcccC----CCCC-cccc-CCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 014490 119 MEES--------VEWEHKS----KVPG-KMHA-CGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (423)
Q Consensus 119 ~~~~--------~~w~~~~----~~~g-~~~g-rG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE 174 (423)
.++. .+.+|++ .+.+ -|.. +...||.|+.++++.++.+.+ ++.+|..+....|=
T Consensus 241 ~~~~~~~iaLVGKGitFDsGGisiKp~~~M~~MK~DMgGAAaV~g~~~a~a~l~--l~vnv~~vl~~~EN 308 (485)
T COG0260 241 KGKAKKPIALVGKGITFDSGGISIKPAAGMDTMKYDMGGAAAVLGAMRALAELK--LPVNVVGVLPAVEN 308 (485)
T ss_pred CCCCCceEEEEcCceeecCCCcccCCccchhhhhcccchHHHHHHHHHHHHHcC--CCceEEEEEeeecc
Confidence 2211 1223431 1111 1211 111389999999999999875 78889888877765
No 93
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=81.25 E-value=0.53 Score=36.39 Aligned_cols=13 Identities=38% Similarity=0.378 Sum_probs=8.6
Q ss_pred CCchhhHHHHHHH
Q 014490 1 MGSSKLLSLLVTL 13 (423)
Q Consensus 1 m~~~k~~~~~~~~ 13 (423)
|.+|++|||.++|
T Consensus 1 MaSK~~llL~l~L 13 (95)
T PF07172_consen 1 MASKAFLLLGLLL 13 (95)
T ss_pred CchhHHHHHHHHH
Confidence 8988766555543
No 94
>COG4882 Predicted aminopeptidase, Iap family [General function prediction only]
Probab=76.19 E-value=6 Score=38.04 Aligned_cols=72 Identities=24% Similarity=0.153 Sum_probs=44.2
Q ss_pred CceEEEEECCCCCcEEEEEEecccccCcCCCCCcccCCCCCccccCCchHHHHHHHHHHHHHHhccccCCceEEEEEecC
Q 014490 93 VTGVVGYIGTGQPPFVALRADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPA 172 (423)
Q Consensus 93 ~~nvia~~~~~~~~~ill~~H~Dtvp~~~~~~w~~~~~~~g~~~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~ 172 (423)
.+|+|+.- ++.+.++++.+|.|+=..|. .|+. .|+++.+.++.-|...+ ...-++..++
T Consensus 178 ~y~~Ia~~-~~en~vv~i~AH~DHW~~G~---------tDN~-------lg~~~AV~~~~~lr~~~----~~~~lv~FtA 236 (486)
T COG4882 178 DYNVIAVD-GGENGVVLIGAHLDHWYTGF---------TDNI-------LGVAQAVETAGRLRGRG----LAAGLVVFTA 236 (486)
T ss_pred EEEEEEec-CCCCCceEEeechhhhhhcc---------cchh-------hhHHHHHHHHHHHhhcC----cceeEEEEec
Confidence 34666653 33347899999999855432 1222 46888888887776544 2344555556
Q ss_pred CC-Cc---------ccHHHHHhc
Q 014490 173 EE-GG---------GGAKKMLDA 185 (423)
Q Consensus 173 EE-g~---------~Ga~~~~~~ 185 (423)
|| |+ .|++.+++.
T Consensus 237 EE~g~p~~~sfyWa~GSr~~lk~ 259 (486)
T COG4882 237 EEHGMPGMASFYWAAGSRGLLKE 259 (486)
T ss_pred cccCCCCCcceeecccchHHHhh
Confidence 77 54 466666654
No 95
>PF08139 LPAM_1: Prokaryotic membrane lipoprotein lipid attachment site; InterPro: IPR012640 In prokaryotes, membrane lipoproteins are synthesized with a precursor signal peptide, which is cleaved by a specific lipoprotein signal peptidase (signal peptidase II). The peptidase recognises a conserved sequence and cuts upstream of a cysteine residue to which a glyceride-fatty acid lipid is attached [,]. This lipid attachment site is found in homologues of the VirB proteins of type IV secretion systems (T4SS). Conjugal transfer across the cell envelope of Gram-negative bacteria is mediated by a supramolecular structure termed mating pair formation (Mpf) complex. Collectively, secretion pathways ancestrally related to bacterial conjugation systems are now known as T4SS. T4SS are involved in the delivery of effector molecules to eukaryotic target cells; each of these systems exports distinct DNA or protein substrates to effect a myriad of changes in host cell physiology during infection [].
Probab=63.51 E-value=6.8 Score=22.09 Aligned_cols=17 Identities=35% Similarity=0.514 Sum_probs=12.0
Q ss_pred chhhHHHHHHHHHhhcC
Q 014490 3 SSKLLSLLVTLYLLAPT 19 (423)
Q Consensus 3 ~~k~~~~~~~~~~~~~~ 19 (423)
+||+++.++.++.++..
T Consensus 7 mKkil~~l~a~~~LagC 23 (25)
T PF08139_consen 7 MKKILFPLLALFMLAGC 23 (25)
T ss_pred HHHHHHHHHHHHHHhhc
Confidence 58888888777755543
No 96
>PRK14864 putative biofilm stress and motility protein A; Provisional
Probab=61.29 E-value=14 Score=29.04 Aligned_cols=24 Identities=17% Similarity=0.176 Sum_probs=19.7
Q ss_pred CCCcHHHHHHHHHHHHhCCCCeEe
Q 014490 66 GFQEFETSKLIRAELDQMGIPYKF 89 (423)
Q Consensus 66 s~~E~~~~~~l~~~l~~~g~~~~~ 89 (423)
.+...++.+-|.+...+.|-++.+
T Consensus 59 ~gsp~d~~~~La~KAda~GA~yYr 82 (104)
T PRK14864 59 RGSPDDAEREIQAKANAAGADYYV 82 (104)
T ss_pred CCCHHHHHHHHHHHHHHcCCCEEE
Confidence 456788899999999999988654
No 97
>PF06675 DUF1177: Protein of unknown function (DUF1177); InterPro: IPR009561 This family consists of several hypothetical archaeal and bacterial proteins of around 300 residues in length. The function of this family is unknown.
Probab=57.23 E-value=23 Score=32.27 Aligned_cols=85 Identities=14% Similarity=0.268 Sum_probs=51.0
Q ss_pred CCcEEEEEEecccccCcCCCCCcccCCCCCccccCCchHHHHHHHHHHHH--HHhccccCCceEEEEEecCCC--C----
Q 014490 104 QPPFVALRADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKM--LQVFRHEIKGTIVLVFQPAEE--G---- 175 (423)
Q Consensus 104 ~~~~ill~~H~Dtvp~~~~~~w~~~~~~~g~~~grG~k~~~a~~l~a~~~--l~~~~~~~~~~i~~~~~~~EE--g---- 175 (423)
..|++-+.|-+-.+.+.+. +. |.. -.++|.++++-.|+|. |++.|+.++++|.+.-.-.-- .
T Consensus 30 ~aptlGIiGRLGgigARP~-------~i-GlV--SDaDGAi~ala~a~KL~~M~~kGd~L~GDVii~ThIcp~Apt~PH~ 99 (276)
T PF06675_consen 30 SAPTLGIIGRLGGIGARPE-------RI-GLV--SDADGAIAALAAALKLLDMQAKGDVLPGDVIITTHICPDAPTRPHD 99 (276)
T ss_pred CCCeeEEEeeccccccccc-------ce-eee--ecCchHHHHHHHHHHHHHHHHcCCccCCcEEEEEecCCCCCCCCCC
Confidence 4589988877666554321 00 111 1125777777777765 457788999999987653322 1
Q ss_pred -------cccHHHHHhcCCCcccceeeeec
Q 014490 176 -------GGGAKKMLDAGALENVEAIFGLH 198 (423)
Q Consensus 176 -------~~Ga~~~~~~~~~~~~d~~i~~~ 198 (423)
-.+...+.+.-..+..|+++.++
T Consensus 100 PvpFM~sPv~~~~~n~~EV~p~mdAILSiD 129 (276)
T PF06675_consen 100 PVPFMGSPVDMATMNRHEVDPEMDAILSID 129 (276)
T ss_pred CcccccCccCHHHHHHhhcCcccceEEEEe
Confidence 14555665554445678888764
No 98
>PRK02256 putative aminopeptidase 1; Provisional
Probab=56.86 E-value=16 Score=36.98 Aligned_cols=44 Identities=25% Similarity=0.268 Sum_probs=31.4
Q ss_pred CccccCCc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHH
Q 014490 133 GKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAK 180 (423)
Q Consensus 133 g~~~grG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~ 180 (423)
..|.|.+- ..++.+++.++..+. .++..++++++..|| |+.|+.
T Consensus 252 efI~s~rLDNr~~~~~~leal~~~~----~~~~~~~~~~~dqEEVGs~ga~ 298 (462)
T PRK02256 252 SLIGAYGQDDRVCAYTSLEALLELE----NPEKTAVVLLVDKEEIGSEGNT 298 (462)
T ss_pred ceeeccccccHHHHHHHHHHHHhcc----cCCCeEEEEEEcccccCCcchh
Confidence 45556554 378888888886553 356789999999999 765544
No 99
>PRK13883 conjugal transfer protein TrbH; Provisional
Probab=53.91 E-value=69 Score=27.06 Aligned_cols=20 Identities=10% Similarity=-0.034 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHhCCCCeEe
Q 014490 70 FETSKLIRAELDQMGIPYKF 89 (423)
Q Consensus 70 ~~~~~~l~~~l~~~g~~~~~ 89 (423)
...+..|++.|++.|+.+..
T Consensus 63 D~Fg~aL~~aLR~~GYaV~e 82 (151)
T PRK13883 63 DAFGQALVKALRDKGYALLE 82 (151)
T ss_pred cHHHHHHHHHHHHcCeEEEe
Confidence 46789999999999998865
No 100
>PRK02813 putative aminopeptidase 2; Provisional
Probab=48.73 E-value=19 Score=36.15 Aligned_cols=43 Identities=23% Similarity=0.091 Sum_probs=30.0
Q ss_pred ccccCCc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Ccc---cHHH
Q 014490 134 KMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGG---GAKK 181 (423)
Q Consensus 134 ~~~grG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~---Ga~~ 181 (423)
.+.|.+- ..++.+++.++..+.+ +.+++++++..|| |+. ||..
T Consensus 227 ~i~s~~lDnr~~~~~~l~al~~~~~-----~~~~~~~~~d~EEVGs~~~~GA~s 275 (428)
T PRK02813 227 FISSGRLDNLSSCHAGLEALLAAAS-----DATNVLAAFDHEEVGSATKQGADS 275 (428)
T ss_pred EEEEecchhHHHHHHHHHHHHhcCC-----CCeEEEEEEecCccCCCCCcccCc
Confidence 4444444 3677777777765532 6799999999999 776 7774
No 101
>COG2984 ABC-type uncharacterized transport system, periplasmic component [General function prediction only]
Probab=42.65 E-value=2.1e+02 Score=27.45 Aligned_cols=106 Identities=19% Similarity=0.201 Sum_probs=63.7
Q ss_pred hHhCCCCCCCcHHHHHHHHHHHHhCCC---CeEec-----------------ccCceEEEEECC---------CCCcEEE
Q 014490 59 IHENPELGFQEFETSKLIRAELDQMGI---PYKFP-----------------VAVTGVVGYIGT---------GQPPFVA 109 (423)
Q Consensus 59 l~~ips~s~~E~~~~~~l~~~l~~~g~---~~~~~-----------------~~~~nvia~~~~---------~~~~~il 109 (423)
++++|+. .++.+=+.+.|++.|+ ++... ...+-++.-+.. ..+..|+
T Consensus 38 ~veHpaL----d~~~~G~~~aLk~~G~~n~~i~~~na~~~~~~a~~iarql~~~~~dviv~i~tp~Aq~~~s~~~~iPVV 113 (322)
T COG2984 38 FVEHPAL----DAAREGVKEALKDAGYKNVKIDYQNAQGDLGTAAQIARQLVGDKPDVIVAIATPAAQALVSATKTIPVV 113 (322)
T ss_pred eecchhH----HHHHHHHHHHHHhcCccCeEEEeecCCCChHHHHHHHHHhhcCCCcEEEecCCHHHHHHHHhcCCCCEE
Confidence 4455555 4566677777777777 22220 123334444432 1224566
Q ss_pred EEEecccccCcCCCCCcccCCCCCccccCCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCC
Q 014490 110 LRADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEG 175 (423)
Q Consensus 110 l~~H~Dtvp~~~~~~w~~~~~~~g~~~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg 175 (423)
|.+=.|-+...-...|.- -++.++|--....+.-.+.+++++- ..-.+|.++..++|+.
T Consensus 114 ~aavtd~v~a~Lv~~~~~---pg~NvTGvsD~~~v~q~i~lik~~~----Pnak~Igv~Y~p~E~n 172 (322)
T COG2984 114 FAAVTDPVGAKLVKSLEQ---PGGNVTGVSDLLPVAQQIELIKALL----PNAKSIGVLYNPGEAN 172 (322)
T ss_pred EEccCchhhccCCccccC---CCCceeecCCcchHHHHHHHHHHhC----CCCeeEEEEeCCCCcc
Confidence 666666655443333422 2466888777778889999888774 2236899999999984
No 102
>PF13956 Ibs_toxin: Toxin Ibs, type I toxin-antitoxin system
Probab=40.94 E-value=20 Score=18.35 Aligned_cols=12 Identities=50% Similarity=0.667 Sum_probs=4.8
Q ss_pred hhhHHHHHHHHH
Q 014490 4 SKLLSLLVTLYL 15 (423)
Q Consensus 4 ~k~~~~~~~~~~ 15 (423)
.|+.++++.|++
T Consensus 2 Mk~vIIlvvLLl 13 (19)
T PF13956_consen 2 MKLVIILVVLLL 13 (19)
T ss_pred ceehHHHHHHHh
Confidence 344444333333
No 103
>PRK06156 hypothetical protein; Provisional
Probab=40.31 E-value=1.7e+02 Score=30.18 Aligned_cols=25 Identities=20% Similarity=0.268 Sum_probs=21.4
Q ss_pred eEEEEEEecCCCCccCCCcEEEEEE
Q 014490 268 VLTVAKFEGGGAFNIIPDSVTIGGT 292 (423)
Q Consensus 268 t~~v~~i~gg~~~n~iP~~a~~~~d 292 (423)
+.++..++||...|+||+.|.+.+.
T Consensus 240 ~~~l~~~~gG~~~n~ip~~a~~~~~ 264 (520)
T PRK06156 240 GAEIVAMTGGAFANQIPQTAVATLS 264 (520)
T ss_pred ceeEEEEEcCCcCCCCCCccEEEEe
Confidence 4678888999999999999998843
No 104
>PRK11372 lysozyme inhibitor; Provisional
Probab=37.65 E-value=27 Score=27.79 Aligned_cols=17 Identities=29% Similarity=0.413 Sum_probs=11.7
Q ss_pred CCchhhHHHHHHHHHhh
Q 014490 1 MGSSKLLSLLVTLYLLA 17 (423)
Q Consensus 1 m~~~k~~~~~~~~~~~~ 17 (423)
|+||+++.++++++++-
T Consensus 1 ~~mk~ll~~~~~~lL~g 17 (109)
T PRK11372 1 MSMKKLLIICLPVLLTG 17 (109)
T ss_pred CchHHHHHHHHHHHHHH
Confidence 89999776666555443
No 105
>PHA02291 hypothetical protein
Probab=37.45 E-value=19 Score=28.02 Aligned_cols=15 Identities=7% Similarity=0.215 Sum_probs=11.2
Q ss_pred CCchhhHHHHHHHHH
Q 014490 1 MGSSKLLSLLVTLYL 15 (423)
Q Consensus 1 m~~~k~~~~~~~~~~ 15 (423)
|+.|+|+|.++++++
T Consensus 1 MS~K~~iFYiL~~~V 15 (132)
T PHA02291 1 MSRKASIFYILVVIV 15 (132)
T ss_pred CCcchhhHHHHHHHH
Confidence 888998877766543
No 106
>PF09940 DUF2172: Domain of unknown function (DUF2172); InterPro: IPR012353 The proteins in this entry are encoded by genes located in polysaccharide biosynthesis gene clusters, and are therefore believed to be involved in polysaccharide biosynthesis. The ste gene cluster (for Streptomyces eps) is involved in exopolysaccharide EPS 139A biosynthesis in Streptomyces sp. 139 []. Members of this group exhibit distant sequence similarity to aminopeptidases (IPR007484 from INTERPRO, MEROPS peptidase family M28).; PDB: 3K9T_A.
Probab=35.73 E-value=1.3e+02 Score=29.59 Aligned_cols=63 Identities=17% Similarity=0.119 Sum_probs=38.4
Q ss_pred CCCCCcEEEEEEecccccCcCCCCCcccCCCCCccccCCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCcccHH
Q 014490 101 GTGQPPFVALRADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGGGAK 180 (423)
Q Consensus 101 ~~~~~~~ill~~H~Dtvp~~~~~~w~~~~~~~g~~~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg~~Ga~ 180 (423)
+|.....|+|.+|+.+ |.- -++.+ +|.+.++..+++|++.. ...+.+|+|.++= .|+-
T Consensus 125 pG~s~~EillsthiCH-Psm----------ANdnL------SG~~v~~~La~~L~~~~--~rytYRflf~PeT---IGsI 182 (386)
T PF09940_consen 125 PGESDEEILLSTHICH-PSM----------ANDNL------SGPAVLTFLAKWLKQLP--NRYTYRFLFVPET---IGSI 182 (386)
T ss_dssp --SSS-EEEEEEE-----S-----------TTTTH------HHHHHHHHHHHHHTTS----SSEEEEEEE-TT---HHHH
T ss_pred cCCCCCeEEEEEeccC-ccc----------ccccc------cHHHHHHHHHHHHhcCC--cCceEEEEEcccc---HHHH
Confidence 5555689999999988 421 01222 67889999999998765 4499999999854 5776
Q ss_pred HHHhc
Q 014490 181 KMLDA 185 (423)
Q Consensus 181 ~~~~~ 185 (423)
..+.+
T Consensus 183 ~yLsk 187 (386)
T PF09940_consen 183 TYLSK 187 (386)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66543
No 107
>PF04114 Gaa1: Gaa1-like, GPI transamidase component ; InterPro: IPR007246 GPI (glycosyl phosphatidyl inositol) transamidase is a multiprotein complex required for a terminal step of adding the glycosylphosphatidylinositol (GPI) anchor attachment onto proteins. Gpi16, Gpi8 and Gaa1 form a sub-complex of the GPI transamidase.; GO: 0016021 integral to membrane, 0042765 GPI-anchor transamidase complex
Probab=35.07 E-value=1.6e+02 Score=30.34 Aligned_cols=72 Identities=22% Similarity=0.278 Sum_probs=49.4
Q ss_pred CceEEEEECC--CCC-cEEEEEEecccccCcCCCCCcccCCCCCccccCCchHHHHHHHHHHHHHHhccccCCceEEEEE
Q 014490 93 VTGVVGYIGT--GQP-PFVALRADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVF 169 (423)
Q Consensus 93 ~~nvia~~~~--~~~-~~ill~~H~Dtvp~~~~~~w~~~~~~~g~~~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~ 169 (423)
+.|++|-++. +++ ..+++..-++... +. ...++++.+|+.++++++.. -..++|+|++
T Consensus 3 G~nvy~i~rapR~d~tEaivl~~~~~~~~--------------~~----~n~~~v~l~lal~~~~~~~~-~wsKDii~l~ 63 (504)
T PF04114_consen 3 GTNVYGILRAPRGDGTEAIVLVVPWRDSD--------------GE----YNAGGVALALALARYFRRQS-YWSKDIIFLF 63 (504)
T ss_pred ceEEEEEEecCCCCCceeEEEEEecCCCC--------------cc----cchhhHHHHHHHHHHhhhch-hhhccEEEEe
Confidence 6789998843 333 6777776544321 11 11457999999999998765 4789999999
Q ss_pred ecCCCCcccHHHHHhc
Q 014490 170 QPAEEGGGGAKKMLDA 185 (423)
Q Consensus 170 ~~~EEg~~Ga~~~~~~ 185 (423)
+.+|. .|++..+++
T Consensus 64 ~~~~~--~g~~awl~~ 77 (504)
T PF04114_consen 64 TDDEL--AGMQAWLEA 77 (504)
T ss_pred cCCcc--hHHHHHHHH
Confidence 87665 567777664
No 108
>cd06406 PB1_P67 A PB1 domain is present in p67 proteins which forms a signaling complex with p40, a crucial step for activation of NADPH oxidase during phagocytosis. PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes . A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, fungi, animals, and plants. The p67 proteins contain
Probab=33.12 E-value=1.5e+02 Score=22.06 Aligned_cols=58 Identities=10% Similarity=0.058 Sum_probs=35.4
Q ss_pred cEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCccccCHHHHHHH
Q 014490 286 SVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHF 346 (423)
Q Consensus 286 ~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l 346 (423)
+.+..+.+|.+++.+..++.++|.+.++-.+. ...+.+.........+. .|..+-.++
T Consensus 8 ~f~~tIaIrvp~~~~y~~L~~ki~~kLkl~~e--~i~LsYkde~s~~~v~l-~d~dle~aw 65 (80)
T cd06406 8 HFKYTVAIQVARGLSYATLLQKISSKLELPAE--HITLSYKSEASGEDVIL-SDTNMEDVW 65 (80)
T ss_pred EEEEEEEEEcCCCCCHHHHHHHHHHHhCCCch--hcEEEeccCCCCCccCc-ChHHHHHHH
Confidence 35567889999999999999999988864322 23333333212334444 455544433
No 109
>KOG3566 consensus Glycosylphosphatidylinositol anchor attachment protein GAA1 [Posttranslational modification, protein turnover, chaperones]
Probab=32.66 E-value=4.3e+02 Score=27.58 Aligned_cols=89 Identities=19% Similarity=0.265 Sum_probs=56.2
Q ss_pred HHHHHHHHhCCCCeEeccc---------CceEEEEECC--CCC-cEEEEEEecccccCcCCCCCcccCCCCCccccCCch
Q 014490 74 KLIRAELDQMGIPYKFPVA---------VTGVVGYIGT--GQP-PFVALRADMDALAMEESVEWEHKSKVPGKMHACGHD 141 (423)
Q Consensus 74 ~~l~~~l~~~g~~~~~~~~---------~~nvia~~~~--~~~-~~ill~~H~Dtvp~~~~~~w~~~~~~~g~~~grG~k 141 (423)
.|+...+++.|.++..... +.||.+.++. +++ ..++|. ||.++. -|- ..
T Consensus 92 ~~~~~~~q~FGl~t~~~n~~~~P~e~y~G~NvyGilRAPRgdgtEsivl~-----vP~~~~-------------~~~-~~ 152 (617)
T KOG3566|consen 92 AWAEVSMQEFGLETHTQNYSNGPFEEYSGENVYGILRAPRGDGTESIVLV-----VPYGRS-------------SGS-NS 152 (617)
T ss_pred hHHHHHHHHhCccccccCccCCchhhcCCceEEEEEecCCCCCcceEEEE-----EecccC-------------CCc-ch
Confidence 4577777888988655222 6799999853 333 566664 564321 111 14
Q ss_pred HHHHHHHHHHHHHHhccccCCceEEEEEecCCCCcccHHHHHh
Q 014490 142 AHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGGGAKKMLD 184 (423)
Q Consensus 142 ~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg~~Ga~~~~~ 184 (423)
++++-++..+++++.- .-..++|+++|+-++- .|....++
T Consensus 153 ~~v~l~lsla~~f~r~-~yWsKDII~v~~d~~~--~g~~AwLe 192 (617)
T KOG3566|consen 153 ASVALLLSLADYFSRW-VYWSKDIIFVFTDGPA--LGLDAWLE 192 (617)
T ss_pred hHHHHHHHHHHHhcCC-eeecccEEEEEeCCcc--ccHHHHHH
Confidence 5677778777777653 3578999999998865 45555544
No 110
>PRK10866 outer membrane biogenesis protein BamD; Provisional
Probab=32.01 E-value=1.6e+02 Score=26.94 Aligned_cols=15 Identities=0% Similarity=-0.113 Sum_probs=9.3
Q ss_pred HHHHHHHHHhHhCCC
Q 014490 50 YWMVNIRRKIHENPE 64 (423)
Q Consensus 50 ~~~~~~~~~l~~ips 64 (423)
+..++.++++.+.-.
T Consensus 49 ~~Ai~~f~~l~~~yP 63 (243)
T PRK10866 49 KQAITQLEALDNRYP 63 (243)
T ss_pred HHHHHHHHHHHHhCC
Confidence 566677777765433
No 111
>PRK13835 conjugal transfer protein TrbH; Provisional
Probab=31.22 E-value=1.8e+02 Score=24.30 Aligned_cols=20 Identities=15% Similarity=0.077 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHhCCCCeEe
Q 014490 70 FETSKLIRAELDQMGIPYKF 89 (423)
Q Consensus 70 ~~~~~~l~~~l~~~g~~~~~ 89 (423)
......|++.|+.+|+.+..
T Consensus 68 d~Fg~aL~~aLr~~GYaVvt 87 (145)
T PRK13835 68 SPFGQALEAALKGWGYAVVT 87 (145)
T ss_pred cHHHHHHHHHHHhcCeEEee
Confidence 46788999999999998875
No 112
>PF11546 CompInhib_SCIN: Staphylococcal complement inhibitor SCIN ; InterPro: IPR021612 SCIN is released by Staphylococcus aureus to counteract the host immune defense. The protein binds to and inhibits C3 convertases on the bacterial surface, reducing phagocytosis and blocking downstream effector functions by C3b deposition on its surface []. An 18 residue stretch 31-48 is crucial for SCIN activity []. ; PDB: 3L3O_P 3OHX_P 3NMS_M 3L5N_M 3T49_C 3T4A_H 2WIN_P 2QFF_A 3T48_B 3T47_B ....
Probab=30.04 E-value=25 Score=27.65 Aligned_cols=20 Identities=25% Similarity=0.109 Sum_probs=0.0
Q ss_pred CCchhhHHHHHHHHHhhcCC
Q 014490 1 MGSSKLLSLLVTLYLLAPTS 20 (423)
Q Consensus 1 m~~~k~~~~~~~~~~~~~~~ 20 (423)
|+|||.++--++.+++.++.
T Consensus 1 Mk~KkyiltG~la~lL~st~ 20 (114)
T PF11546_consen 1 MKFKKYILTGTLAALLSSTG 20 (114)
T ss_dssp --------------------
T ss_pred CcHHHHHHHHHHHHHHccch
Confidence 99999776555555544444
No 113
>PTZ00371 aspartyl aminopeptidase; Provisional
Probab=28.96 E-value=1.9e+02 Score=29.46 Aligned_cols=61 Identities=13% Similarity=0.154 Sum_probs=38.7
Q ss_pred HHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEe---------------cccCceEEEEE-CCC---C-CcEEEEEEecc
Q 014490 56 RRKIHENPELGFQEFETSKLIRAELDQMGIPYKF---------------PVAVTGVVGYI-GTG---Q-PPFVALRADMD 115 (423)
Q Consensus 56 ~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~---------------~~~~~nvia~~-~~~---~-~~~ill~~H~D 115 (423)
.++++.+=.-|..+..+.+++.+.|++.||.--. ......++|.. ++. . ..--+..+|.|
T Consensus 9 ~~~~~~Fl~~s~t~~hav~~~~~~L~~~GF~~l~e~~~w~l~~g~kyyv~r~~ssl~Af~vg~~~~~~~~g~~ivgaHtD 88 (465)
T PTZ00371 9 AQEFLNFINKTGSPFHAVQELKERLKKSGFKQLNEGENWKLEKGGKYYLTRNNSTIVAFTVGKKFDAPNGGFKIVGAHTD 88 (465)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHCcCEEccccccCccCCCCEEEEEcCCcEEEEEEeCCCCccCCCCeEEEEEecc
Confidence 3344444444556789999999999999996311 11233566665 333 1 13568899999
Q ss_pred c
Q 014490 116 A 116 (423)
Q Consensus 116 t 116 (423)
.
T Consensus 89 s 89 (465)
T PTZ00371 89 S 89 (465)
T ss_pred C
Confidence 7
No 114
>COG1362 LAP4 Aspartyl aminopeptidase [Amino acid transport and metabolism]
Probab=28.60 E-value=1e+02 Score=30.68 Aligned_cols=76 Identities=14% Similarity=-0.077 Sum_probs=51.7
Q ss_pred cCHHHHHHHHHHHHHhcCCcccc---cCCCCCCCchHHH-HHhh-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHH
Q 014490 338 NNKNLHEHFQKVAADMLGVQNIK---ENRPLMGTEDFSF-FAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPY 412 (423)
Q Consensus 338 ~d~~~~~~l~~~~~~~~g~~~~~---~~~~~~g~tD~~~-~~~~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~ 412 (423)
+|++.+..+++++++. |..... .....+|||=+.. .++. ++++=+|.+ . -..|++.|-....|+..
T Consensus 354 td~~~~a~~~~l~~~~-~Vp~Q~f~~~~d~~~Gstigpi~aa~tGi~tIDiG~~--~------LsMHS~rE~~g~~D~~~ 424 (437)
T COG1362 354 TDSEGIALLRKLAQKA-GVPWQVFVLRNDVPCGSTIGPILAARTGIRTIDIGPA--L------LSMHSIRELSGSADLYE 424 (437)
T ss_pred cCchHHHHHHHHHHHc-CCceEEEEecccCCCCcccchhHHhhcCCceeecchh--h------hhhccHHHHcchhHHHH
Confidence 4677888899999887 764321 1123334444444 4444 776644433 2 24899999999999999
Q ss_pred HHHHHHHHHh
Q 014490 413 GAALHASLAT 422 (423)
Q Consensus 413 ~~~~~~~~i~ 422 (423)
..+.|..|+.
T Consensus 425 ~~~~~~aFf~ 434 (437)
T COG1362 425 AYKALSAFFE 434 (437)
T ss_pred HHHHHHHHHh
Confidence 9999998875
No 115
>PRK13681 hypothetical protein; Provisional
Probab=28.02 E-value=63 Score=19.69 Aligned_cols=17 Identities=18% Similarity=0.182 Sum_probs=11.2
Q ss_pred CCchhhHHHHHHHHHhh
Q 014490 1 MGSSKLLSLLVTLYLLA 17 (423)
Q Consensus 1 m~~~k~~~~~~~~~~~~ 17 (423)
|+.+|+.++.++.+.+.
T Consensus 1 M~~~K~~~i~lfalmAi 17 (35)
T PRK13681 1 MRIAKIGVIALFLLMAI 17 (35)
T ss_pred CcHHHHHHHHHHHHHHh
Confidence 88888776666554443
No 116
>PF14133 DUF4300: Domain of unknown function (DUF4300)
Probab=27.72 E-value=2.5e+02 Score=25.97 Aligned_cols=65 Identities=8% Similarity=0.042 Sum_probs=45.0
Q ss_pred HHHHHHHhHhCCCCCCCc-HHHHHHHHHHHHhCCCCeEecccCceEEEEECCCCCcEEEEEEeccccc
Q 014490 52 MVNIRRKIHENPELGFQE-FETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALA 118 (423)
Q Consensus 52 ~~~~~~~l~~ips~s~~E-~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~~~~~~ill~~H~Dtvp 118 (423)
--.+..-..+||...... ..-++-|.+.+++.|++. ...+..+|-.+-..+....+|.||.=+.-
T Consensus 128 ~~~F~~lFs~i~t~~t~D~~~h~~~i~k~wk~rgi~F--~~~k~slISV~~h~~d~~~lFvGH~GVLv 193 (250)
T PF14133_consen 128 KEKFTTLFSRIPTENTKDIKVHAEKIQKYWKERGIKF--NNDKASLISVFLHDPDDNSLFVGHTGVLV 193 (250)
T ss_pred HHHHHHHhCcCCccccCCHHHHHHHHHHHHHHcCcee--CCCceEEEEEEEEcCCCCeEEeeeEEEEE
Confidence 333444455688776554 455788999999999988 34455666666333557899999987764
No 117
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism]
Probab=27.69 E-value=75 Score=31.75 Aligned_cols=70 Identities=19% Similarity=0.183 Sum_probs=41.0
Q ss_pred cEEEEEEecccccC-cCCCCCccc------CCCCCccc-cCCch-HHHHHHHHHHHHHHhccccCCceEEEEEecCCC-C
Q 014490 106 PFVALRADMDALAM-EESVEWEHK------SKVPGKMH-ACGHD-AHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-G 175 (423)
Q Consensus 106 ~~ill~~H~Dtvp~-~~~~~w~~~------~~~~g~~~-grG~k-~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g 175 (423)
..+.|.||+|-||. +......+. .+++.++- .+|++ -+++..+. .|.. ...++...++++|| +
T Consensus 62 ~~~~L~a~~d~V~~i~~~sh~Dt~~d~~~~~v~~~~l~~~~Gad~i~~~~~~a---~L~~----~~~P~~~~~t~~~ei~ 134 (414)
T COG2195 62 VPAVLQAHLDMVPEIGFISHHDTVPDPIGPNVNPQILKATLGADNIGLAIGLA---VLSP----EHFPLEVLLTGDEEIT 134 (414)
T ss_pred eeEEeeccccccccccccccccccccccccccCCceeeeccCcchhhhhhHHh---hcCc----ccCCceeeeecceEEe
Confidence 56789999999984 333333332 12344444 45653 23333332 2321 35679999999999 7
Q ss_pred cccHHHH
Q 014490 176 GGGAKKM 182 (423)
Q Consensus 176 ~~Ga~~~ 182 (423)
..|+.-+
T Consensus 135 ~dGa~LL 141 (414)
T COG2195 135 TDGATLL 141 (414)
T ss_pred ccCcccc
Confidence 7787733
No 118
>COG0766 MurA UDP-N-acetylglucosamine enolpyruvyl transferase [Cell envelope biogenesis, outer membrane]
Probab=26.78 E-value=2.6e+02 Score=27.80 Aligned_cols=65 Identities=18% Similarity=0.323 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCCceEEEEEEec--CCCCccCCCcEEE------------EEEEecCChhhHHHHHHHH
Q 014490 243 IVAASNVIVSLQHLVSREADPLDSQVLTVAKFEG--GGAFNIIPDSVTI------------GGTFRAFSKESIIQLKQRI 308 (423)
Q Consensus 243 i~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~g--g~~~n~iP~~a~~------------~~d~R~~~~~~~~~v~~~i 308 (423)
|..++.++++|-.- ...-+..++.|..++. |....+|||.-++ .+.++-...+..+.+.+++
T Consensus 193 IvDLa~~Ln~MGA~----I~GaGT~~I~I~GV~~L~g~~h~VipDRIEAGT~~~aaA~tgg~v~i~~v~~~hl~~~~~kL 268 (421)
T COG0766 193 IVDLANFLNKMGAK----IEGAGTSTITIEGVEKLHGAEHSVIPDRIEAGTFLVAAAITGGDVTIENVRPEHLEAVLAKL 268 (421)
T ss_pred HHHHHHHHHHcCCe----eEEcCCCeEEEeccccccceeeEecCchhhHHHHHHHHHHhCCcEEEeCCCHHHHHHHHHHH
Confidence 45555555554322 1122445777777664 6778899998776 4566666666666676776
Q ss_pred HHH
Q 014490 309 EEV 311 (423)
Q Consensus 309 ~~~ 311 (423)
++.
T Consensus 269 ~e~ 271 (421)
T COG0766 269 REA 271 (421)
T ss_pred HHh
Confidence 665
No 119
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=26.63 E-value=1.3e+02 Score=30.82 Aligned_cols=43 Identities=12% Similarity=0.050 Sum_probs=34.9
Q ss_pred ceEEEEEEecCCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHH
Q 014490 267 QVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQ 315 (423)
Q Consensus 267 ~t~~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~ 315 (423)
+++|++.++- --+.+++.+++|+++..+.+++.++++.+.+..
T Consensus 344 ~S~Nlg~v~~------~~~~~~i~~~~Rs~~~~~~~~i~~~i~~~~~~~ 386 (485)
T PRK15026 344 TSLNVGVVTM------TDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLA 386 (485)
T ss_pred eeeEEEEEEE------eCCEEEEEEEecCCCchHHHHHHHHHHHHHHHc
Confidence 5677777653 335799999999999999999999998887643
No 120
>cd06411 PB1_p51 The PB1 domain is present in the p51 protein, a homolog of the p67 protein. p51 plays an important role in NADPH oxidase activation during phagosytosis. The PB1 domain is a modular domain mediating specific protein-protein interaction in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain mo
Probab=25.08 E-value=2e+02 Score=21.28 Aligned_cols=33 Identities=15% Similarity=0.168 Sum_probs=28.1
Q ss_pred CcEEEEEEEecCChhhHHHHHHHHHHHHHHHHH
Q 014490 285 DSVTIGGTFRAFSKESIIQLKQRIEEVVMKQAS 317 (423)
Q Consensus 285 ~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~ 317 (423)
-+|+++|.+|..++.+...+.+.|.+.+...+.
T Consensus 3 Vh~~fTVai~v~~g~~y~~L~~~ls~kL~l~~~ 35 (78)
T cd06411 3 VQCAFTVALRAPRGADVSSLRALLSQALPQQAQ 35 (78)
T ss_pred EEEEEEEEEEccCCCCHHHHHHHHHHHhcCChh
Confidence 368899999999999999999999888875544
No 121
>PF11777 DUF3316: Protein of unknown function (DUF3316); InterPro: IPR016879 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=22.14 E-value=49 Score=26.42 Aligned_cols=18 Identities=22% Similarity=0.207 Sum_probs=10.5
Q ss_pred chhhHHHHHHHHHhhcCC
Q 014490 3 SSKLLSLLVTLYLLAPTS 20 (423)
Q Consensus 3 ~~k~~~~~~~~~~~~~~~ 20 (423)
|||++++++++++++...
T Consensus 1 MKk~~ll~~~ll~s~~a~ 18 (114)
T PF11777_consen 1 MKKIILLASLLLLSSSAF 18 (114)
T ss_pred CchHHHHHHHHHHHHHHh
Confidence 577777775555544333
No 122
>PF11153 DUF2931: Protein of unknown function (DUF2931); InterPro: IPR021326 Some members in this family of proteins are annotated as lipoproteins however this cannot be confirmed. Currently, there is no known function.
Probab=21.96 E-value=68 Score=28.79 Aligned_cols=18 Identities=33% Similarity=0.412 Sum_probs=10.7
Q ss_pred chhhHHHHHHHHHhhcCC
Q 014490 3 SSKLLSLLVTLYLLAPTS 20 (423)
Q Consensus 3 ~~k~~~~~~~~~~~~~~~ 20 (423)
|||+++++++|+++++++
T Consensus 1 mk~i~~l~l~lll~~C~~ 18 (216)
T PF11153_consen 1 MKKILLLLLLLLLTGCST 18 (216)
T ss_pred ChHHHHHHHHHHHHhhcC
Confidence 577777665555544444
No 123
>COG0065 LeuC 3-isopropylmalate dehydratase large subunit [Amino acid transport and metabolism]
Probab=21.91 E-value=3.8e+02 Score=26.55 Aligned_cols=38 Identities=13% Similarity=0.233 Sum_probs=24.8
Q ss_pred ccccCCchHHHHHHHHHHHHHHhccccCCceEEEEEecCC
Q 014490 134 KMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAE 173 (423)
Q Consensus 134 ~~~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~E 173 (423)
...|--++|-+-=+=.|++.|+ +.+...+++++..++-
T Consensus 298 VFIGSCTNgRieDLr~AA~Ilk--grkva~~Vr~iVvP~S 335 (423)
T COG0065 298 VFIGSCTNGRIEDLRAAAEILK--GRKVAPGVRAIVVPGS 335 (423)
T ss_pred EEEeccCCccHHHHHHHHHHhc--cCccCCCceEEEecCc
Confidence 3345444555666666777777 5567778888888653
No 124
>PF10829 DUF2554: Protein of unknown function (DUF2554); InterPro: IPR020117 This entry contains proteins with no known function.
Probab=20.86 E-value=2.2e+02 Score=20.56 Aligned_cols=18 Identities=28% Similarity=0.148 Sum_probs=12.7
Q ss_pred chhhHHHHHHHHHhhcCC
Q 014490 3 SSKLLSLLVTLYLLAPTS 20 (423)
Q Consensus 3 ~~k~~~~~~~~~~~~~~~ 20 (423)
+||.+.++++++.+++..
T Consensus 2 ~~k~lS~~lL~caLFSGq 19 (76)
T PF10829_consen 2 FKKGLSALLLICALFSGQ 19 (76)
T ss_pred hHHHHHHHHHHHHHhcch
Confidence 578787777777666554
No 125
>COG1360 MotB Flagellar motor protein [Cell motility and secretion]
Probab=20.67 E-value=3.1e+02 Score=25.12 Aligned_cols=54 Identities=9% Similarity=0.023 Sum_probs=35.8
Q ss_pred EEEEEEecccccCcCCCCCcccCCCCCccccCCc-hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 014490 107 FVALRADMDALAMEESVEWEHKSKVPGKMHACGH-DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (423)
Q Consensus 107 ~ill~~H~Dtvp~~~~~~w~~~~~~~g~~~grG~-k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE 174 (423)
.|.+.||+|-+|.... .++. +...+=...++++|.+.|..+...+.+...++-+
T Consensus 165 ~I~I~GHTDn~p~~~~--------------~~sNWeLS~aRA~~v~~~L~~~g~~~~~~~~~~G~gd~~ 219 (244)
T COG1360 165 NIRIEGHTDNVPIKGS--------------FYSNWELSAARAQSVVRVLINGGLVEAKRLSVVGYADTR 219 (244)
T ss_pred eEEEEeCCCCCCcCCC--------------CCchHHHHHHHHHHHHHHHHHcCCCCcceEEEEeccccc
Confidence 8999999999997542 2222 3456667778888887664455566665554444
No 126
>PRK13731 conjugal transfer surface exclusion protein TraT; Provisional
Probab=20.57 E-value=59 Score=29.64 Aligned_cols=32 Identities=6% Similarity=-0.013 Sum_probs=25.8
Q ss_pred hHhCCCCCCCcH-HHHHHHHHHHHhCCCCeEec
Q 014490 59 IHENPELGFQEF-ETSKLIRAELDQMGIPYKFP 90 (423)
Q Consensus 59 l~~ips~s~~E~-~~~~~l~~~l~~~g~~~~~~ 90 (423)
++++...|..+. .+..-|...|+..|+.+..+
T Consensus 54 yv~vrNTSd~~~~~l~~~i~~~L~~kGY~iv~~ 86 (243)
T PRK13731 54 FLQIKNTSDKDMSGLQGKIADAVKAKGYQVVTS 86 (243)
T ss_pred EEEEeeCCCcchHHHHHHHHHHHHhCCeEEecC
Confidence 567888887664 48899999999999998754
No 127
>PF07438 DUF1514: Protein of unknown function (DUF1514); InterPro: IPR009999 This entry is represented by Bacteriophage phi PVL, Orf60. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several Staphylococcus aureus and related bacteriophage proteins of around 65 residues in length. The function of this family is unknown.
Probab=20.20 E-value=3.2e+02 Score=19.38 Aligned_cols=13 Identities=0% Similarity=-0.133 Sum_probs=7.3
Q ss_pred HHHHhHhCCCCCC
Q 014490 55 IRRKIHENPELGF 67 (423)
Q Consensus 55 ~~~~l~~ips~s~ 67 (423)
+++++++-....+
T Consensus 37 L~~~~v~~~g~~g 49 (66)
T PF07438_consen 37 LFDQFVRDNGYEG 49 (66)
T ss_pred HHHHHhhccCcch
Confidence 4566776555443
No 128
>TIGR03516 ppisom_GldI peptidyl-prolyl isomerase, gliding motility-associated. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldI is a FKBP-type peptidyl-prolyl cis-trans isomerase (pfam00254) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockout of this gene abolishes the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. This family is only found in Bacteroidetes containing the suite of genes proposed to confer the gliding motility phenotype.
Probab=20.11 E-value=2.3e+02 Score=24.65 Aligned_cols=23 Identities=13% Similarity=0.186 Sum_probs=11.4
Q ss_pred HHHHHHHHHhHhCCCCCCCcHHHHHHHH
Q 014490 50 YWMVNIRRKIHENPELGFQEFETSKLIR 77 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~~E~~~~~~l~ 77 (423)
+.-.+..+.|... +|..+.+||.
T Consensus 35 ~~s~~rnk~l~~~-----e~~~I~~~i~ 57 (177)
T TIGR03516 35 KLSAERNKKLIAA-----EEAAIKRIIS 57 (177)
T ss_pred HHHHHHHHHHHHH-----HHHHHHHHHH
Confidence 4445555666654 3344444444
Done!