Query 014490
Match_columns 423
No_of_seqs 156 out of 1654
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 12:31:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014490.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014490hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xmb_A IAA-amino acid hydrolas 100.0 9.2E-61 3.2E-65 476.8 37.8 382 36-422 14-399 (418)
2 1ysj_A Protein YXEP; M20 famil 100.0 2.5E-59 8.6E-64 464.4 41.1 363 50-422 32-397 (404)
3 3io1_A Aminobenzoyl-glutamate 100.0 7.3E-59 2.5E-63 466.3 37.7 374 37-423 3-430 (445)
4 3pfo_A Putative acetylornithin 100.0 1.1E-54 3.7E-59 435.3 28.7 368 31-422 9-425 (433)
5 3ram_A HMRA protein; two-domai 100.0 2.3E-52 7.8E-57 412.7 33.1 352 37-422 5-370 (394)
6 1cg2_A Carboxypeptidase G2; me 100.0 7.6E-53 2.6E-57 416.6 27.5 363 34-422 5-387 (393)
7 3rza_A Tripeptidase; phosphory 100.0 5.9E-52 2E-56 410.6 31.4 356 36-422 12-389 (396)
8 1vgy_A Succinyl-diaminopimelat 100.0 9.9E-52 3.4E-56 408.6 30.8 354 50-422 6-375 (393)
9 3isz_A Succinyl-diaminopimelat 100.0 1.2E-51 4E-56 405.8 31.0 354 50-422 3-372 (377)
10 3dlj_A Beta-Ala-His dipeptidas 100.0 2.3E-51 8E-56 416.4 32.5 374 33-422 10-479 (485)
11 3tx8_A Succinyl-diaminopimelat 100.0 1.6E-51 5.5E-56 403.8 27.8 344 50-423 13-369 (369)
12 3gb0_A Peptidase T; NP_980509. 100.0 5.8E-51 2E-55 400.4 30.9 343 50-422 6-369 (373)
13 2f7v_A Aectylcitrulline deacet 100.0 5E-50 1.7E-54 393.1 27.9 335 50-423 9-367 (369)
14 2zog_A Cytosolic non-specific 100.0 9.5E-50 3.3E-54 404.5 28.6 368 37-422 9-472 (479)
15 2pok_A Peptidase, M20/M25/M40 100.0 1.2E-49 4.2E-54 403.7 27.8 370 36-423 31-479 (481)
16 3pfe_A Succinyl-diaminopimelat 100.0 2.3E-49 7.9E-54 400.3 27.7 368 38-422 7-466 (472)
17 3ct9_A Acetylornithine deacety 100.0 1.6E-49 5.6E-54 387.4 25.1 329 50-423 11-353 (356)
18 3ife_A Peptidase T; metallopep 100.0 6.5E-48 2.2E-52 385.9 30.0 342 50-422 27-428 (434)
19 2rb7_A Peptidase, M20/M25/M40 100.0 1.1E-48 3.7E-53 382.8 23.4 330 50-422 6-356 (364)
20 3khx_A Putative dipeptidase sa 100.0 1.1E-47 3.7E-52 389.6 27.5 355 37-422 23-486 (492)
21 1fno_A Peptidase T; metallo pe 100.0 1.6E-46 5.4E-51 374.2 28.8 341 50-422 2-402 (417)
22 3n5f_A L-carbamoylase, N-carba 100.0 1.9E-45 6.6E-50 365.3 32.4 340 50-422 5-403 (408)
23 1z2l_A Allantoate amidohydrola 100.0 1.2E-45 4.2E-50 368.5 30.0 341 50-422 9-407 (423)
24 2qyv_A XAA-His dipeptidase; YP 100.0 6.4E-45 2.2E-49 369.5 32.4 343 50-422 11-482 (487)
25 2v8h_A Beta-alanine synthase; 100.0 1E-45 3.5E-50 373.7 25.1 339 50-422 32-443 (474)
26 3mru_A Aminoacyl-histidine dip 100.0 6.7E-45 2.3E-49 368.7 27.7 341 50-422 14-484 (490)
27 1lfw_A PEPV; hydrolase, dipept 100.0 9.3E-44 3.2E-48 359.7 29.0 353 39-422 5-462 (470)
28 3t68_A Succinyl-diaminopimelat 100.0 3.4E-33 1.2E-37 261.3 16.9 245 50-422 6-264 (268)
29 4h2k_A Succinyl-diaminopimelat 100.0 5.3E-32 1.8E-36 253.3 20.2 246 49-422 5-264 (269)
30 1q7l_A Aminoacylase-1; catalys 99.9 1.2E-26 4E-31 207.0 14.1 170 50-224 10-198 (198)
31 2fvg_A Endoglucanase; TM1049, 99.9 1.2E-25 4.1E-30 217.3 13.7 244 55-422 3-331 (340)
32 1vhe_A Aminopeptidase/glucanas 99.9 1.3E-23 4.4E-28 205.5 18.3 251 50-422 7-350 (373)
33 2wyr_A Cobalt-activated peptid 99.9 1.9E-23 6.5E-28 201.3 18.6 238 52-422 4-330 (332)
34 2wzn_A TET3, 354AA long hypoth 99.9 1.8E-27 6.2E-32 228.8 -10.5 320 53-422 12-345 (354)
35 2gre_A Deblocking aminopeptida 99.9 1.8E-22 6.3E-27 195.6 19.2 240 50-423 6-344 (349)
36 1y0y_A FRV operon protein FRVX 99.9 1E-21 3.5E-26 190.7 19.8 243 52-422 8-346 (353)
37 1vho_A Endoglucanase; structur 99.9 2.5E-21 8.6E-26 187.5 18.5 241 51-422 6-332 (346)
38 3cpx_A Aminopeptidase, M42 fam 99.9 8.3E-22 2.8E-26 188.6 9.1 237 48-422 15-319 (321)
39 1ylo_A Hypothetical protein SF 99.9 5.3E-20 1.8E-24 178.3 21.7 246 54-423 7-335 (348)
40 3kl9_A PEPA, glutamyl aminopep 99.8 7.1E-17 2.4E-21 155.5 21.8 245 50-423 3-343 (355)
41 1tkj_A Aminopeptidase, SGAP; d 99.7 8.3E-18 2.8E-22 158.1 11.0 119 50-185 7-144 (284)
42 1rtq_A Bacterial leucyl aminop 99.7 4.4E-17 1.5E-21 154.3 12.3 127 50-185 20-164 (299)
43 2vpu_A TET3, 354AA long hypoth 99.7 3.7E-15 1.3E-19 143.4 21.2 241 52-422 11-345 (354)
44 3isx_A Endoglucanase; TM1050, 99.6 9.6E-15 3.3E-19 139.5 20.2 245 50-422 11-342 (343)
45 3tc8_A Leucine aminopeptidase; 99.6 2.2E-15 7.6E-20 142.6 15.7 132 50-187 25-187 (309)
46 3gux_A Putative Zn-dependent e 99.6 3.9E-15 1.3E-19 141.0 14.0 131 50-186 27-189 (314)
47 2afw_A Glutaminyl-peptide cycl 99.5 2.7E-14 9.3E-19 136.7 11.6 126 50-185 31-190 (329)
48 4fuu_A Leucine aminopeptidase; 99.4 9.6E-12 3.3E-16 118.0 17.5 131 50-186 25-187 (309)
49 4f9u_A CG32412; alpha/beta hyd 99.3 1.3E-11 4.4E-16 117.3 14.7 123 50-185 11-163 (312)
50 3pb6_X Glutaminyl-peptide cycl 99.3 3E-11 1E-15 114.8 13.3 124 50-185 39-194 (330)
51 4fai_A CG5976, isoform B; alph 99.3 9.5E-11 3.3E-15 112.0 16.8 134 37-185 26-187 (330)
52 1q7l_B Aminoacylase-1; catalys 99.0 2E-10 6.9E-15 87.6 4.2 74 341-422 2-76 (88)
53 3iib_A Peptidase M28; YP_92679 98.8 1.1E-08 3.7E-13 101.7 10.2 100 70-186 203-317 (444)
54 2ek8_A Aminopeptidase; metallo 98.8 1.4E-08 4.7E-13 100.4 10.3 97 70-185 171-285 (421)
55 3kas_A Transferrin receptor pr 98.2 3.7E-06 1.3E-10 86.5 9.6 79 92-186 265-350 (640)
56 3fed_A Glutamate carboxypeptid 98.1 3.5E-06 1.2E-10 87.6 8.3 77 93-185 312-394 (707)
57 2ijz_A Probable M18-family ami 94.4 0.026 9.1E-07 55.1 4.1 77 337-422 342-423 (428)
58 1y7e_A Probable M18-family ami 93.7 0.03 1E-06 55.2 3.0 77 337-422 376-457 (458)
59 3vat_A Dnpep, aspartyl aminope 93.7 0.098 3.4E-06 51.7 6.6 76 338-422 404-484 (496)
60 3k9t_A Putative peptidase; str 93.4 0.51 1.7E-05 45.4 10.7 72 93-186 165-238 (435)
61 2glf_A Probable M18-family ami 92.8 0.16 5.4E-06 49.9 6.4 76 338-422 368-448 (450)
62 2hc9_A Leucine aminopeptidase 91.4 3.1 0.00011 40.8 13.6 113 50-174 167-307 (491)
63 4eme_A M18 aspartyl aminopepti 90.3 0.37 1.3E-05 48.2 6.1 77 338-422 472-558 (571)
64 2glj_A Probable M18-family ami 89.6 0.15 5E-06 50.3 2.5 76 338-422 380-460 (461)
65 3h8g_F Cytosol aminopeptidase; 87.9 4.9 0.00017 39.5 11.9 115 48-174 178-322 (497)
66 1gyt_A Cytosol aminopeptidase; 87.4 5.4 0.00018 39.4 12.0 115 48-174 179-325 (503)
67 3jru_B Probable cytosol aminop 87.3 5.6 0.00019 39.0 11.9 115 48-174 174-317 (490)
68 1lam_A Leucine aminopeptidase; 87.1 4.8 0.00016 39.5 11.4 121 49-174 160-305 (484)
69 3pei_A Cytosol aminopeptidase; 85.9 5 0.00017 39.3 10.7 115 48-174 162-306 (486)
70 4efd_A Aminopeptidase; structu 84.6 11 0.00037 37.0 12.3 113 50-174 204-345 (522)
71 2ijz_A Probable M18-family ami 84.0 0.21 7.3E-06 48.6 0.1 61 57-117 6-85 (428)
72 3kzw_A Cytosol aminopeptidase; 83.8 9.3 0.00032 37.6 11.5 114 49-174 196-338 (515)
73 3ij3_A Cytosol aminopeptidase; 83.7 9.9 0.00034 37.0 11.5 120 50-174 167-305 (482)
74 2glf_A Probable M18-family ami 83.5 2 6.7E-05 42.0 6.7 68 50-117 14-96 (450)
75 1y7e_A Probable M18-family ami 82.5 0.75 2.5E-05 45.2 3.3 65 51-117 17-99 (458)
76 3kr4_A M17 leucyl aminopeptida 77.6 36 0.0012 33.5 13.2 115 48-174 203-349 (528)
77 2jvf_A De novo protein M7; tet 75.4 9.1 0.00031 26.4 6.0 66 285-358 15-80 (96)
78 1tkj_A Aminopeptidase, SGAP; d 73.8 10 0.00035 34.3 8.1 82 339-422 175-273 (284)
79 2glj_A Probable M18-family ami 63.8 3.7 0.00013 40.3 2.9 36 141-180 263-299 (461)
80 3iib_A Peptidase M28; YP_92679 58.5 6.7 0.00023 38.2 3.7 74 342-422 351-428 (444)
81 3fed_A Glutamate carboxypeptid 55.8 22 0.00075 36.8 7.1 52 34-89 13-67 (707)
82 1rtq_A Bacterial leucyl aminop 55.5 28 0.00096 31.5 7.3 80 339-422 198-284 (299)
83 2ek8_A Aminopeptidase; metallo 54.2 13 0.00046 35.7 5.1 48 38-89 8-57 (421)
84 3tc8_A Leucine aminopeptidase; 50.1 35 0.0012 31.2 7.0 80 341-422 221-307 (309)
85 3mru_A Aminoacyl-histidine dip 49.8 27 0.00092 34.3 6.6 49 266-320 347-395 (490)
86 2kl8_A OR15; structural genomi 31.8 85 0.0029 21.1 4.6 36 290-327 2-37 (85)
87 3kas_A Transferrin receptor pr 30.1 35 0.0012 34.8 3.7 50 35-88 7-61 (640)
88 4f9u_A CG32412; alpha/beta hyd 26.6 58 0.002 29.6 4.4 52 365-422 240-295 (312)
89 3vat_A Dnpep, aspartyl aminope 25.4 1.4E+02 0.0046 29.4 6.8 68 50-117 33-119 (496)
90 4eme_A M18 aspartyl aminopepti 22.4 1.3E+02 0.0045 30.0 6.1 61 56-116 10-90 (571)
91 3pb6_X Glutaminyl-peptide cycl 21.0 89 0.003 28.8 4.4 53 364-422 269-325 (330)
No 1
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=100.00 E-value=9.2e-61 Score=476.82 Aligned_cols=382 Identities=66% Similarity=1.108 Sum_probs=313.9
Q ss_pred chHHHHhhcCchhHHHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEecccCceEEEEECCCCCcEEEEEEecc
Q 014490 36 PVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMD 115 (423)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~~~~~~ill~~H~D 115 (423)
.+++.++++.+++++++++++++|++|||+|++|.++++||.++|+++|++++....++|+++++++++.|+|+|.||||
T Consensus 14 ~~~i~~~~~~~~~~~~~i~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~l~a~~~~~~~~~i~l~aH~D 93 (418)
T 1xmb_A 14 QTKLLEFAKSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAITGVIGYIGTGEPPFVALRADMD 93 (418)
T ss_dssp --CHHHHHHSHHHHHHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHHTCCEEEEETTTEEEEEEESSSSCEEEEEEECC
T ss_pred HHHHHHHHHhhhcHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHcCCeeEeccCCcEEEEEEcCCCCCEEEEEeccc
Confidence 34566666664333789999999999999999999999999999999999988765578999999654228999999999
Q ss_pred cccCcCCCCCcccCCCCCccccCCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCcccHHHHHhcCCCcccceee
Q 014490 116 ALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIF 195 (423)
Q Consensus 116 tvp~~~~~~w~~~~~~~g~~~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg~~Ga~~~~~~~~~~~~d~~i 195 (423)
|||.+++..|+|..++||++||||+|++++++|+|+++|++.+..++++|.|+|+++|||+.|++.+++++.++++|+++
T Consensus 94 ~vp~~~~~~~pf~~~~~g~~~g~G~d~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EEg~~G~~~~~~~g~~~~~d~~i 173 (418)
T 1xmb_A 94 ALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIF 173 (418)
T ss_dssp CBSCCCCCCSTTCCSSTTCBCCSSHHHHHHHHHHHHHHHHHTGGGCSSEEEEEEECCTTTTCHHHHHHHTTTTTTEEEEE
T ss_pred ccCCCCCCCCCcccCCCCceEeCCchHHHHHHHHHHHHHHhccccCCceEEEEEeccccccccHHHHHHcCCcCCCCEEE
Confidence 99999888899988889999999999999999999999999887899999999999999879999999988776789999
Q ss_pred eeccCCCCCCceEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEe
Q 014490 196 GLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFE 275 (423)
Q Consensus 196 ~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~ 275 (423)
++|.++++|+|.+..+.+.+++|..+++|+++|+++|+|.|+.|+|||..+++++.+|+.+..+..++...++++++.|+
T Consensus 174 ~~~~~~~~~~g~~~~~~~~~~~g~~~~~i~v~G~~~Has~P~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~t~~vg~i~ 253 (418)
T 1xmb_A 174 GIHLSARIPFGKAASRAGSFLAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVVTVSKVN 253 (418)
T ss_dssp EEEEEEEEETTCEEECSEEEECEEEEEEEEEEEC---------CCHHHHHHHHHHHHHHTTCBCCSSGGGCEEEEEEEEC
T ss_pred EEecCCCCCCceeEeeeccccccceeEEEEEEecCcccCCCccCCCHHHHHHHHHHHHHHHHhcccCCCCCcEEEEEEEE
Confidence 98877767888766666777889999999999999999999999999999999999999876554455556799999999
Q ss_pred cCCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCC----CCccccCHHHHHHHHHHHH
Q 014490 276 GGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSF----YPVTVNNKNLHEHFQKVAA 351 (423)
Q Consensus 276 gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~d~~~~~~l~~~~~ 351 (423)
||.+.|+||++|++.+|+|+.| +.+++.++|++++++.+..+++++++++ ... ++++.+|+++++.++++++
T Consensus 254 gG~~~NvIP~~a~~~~diR~~~--~~~~i~~~i~~~~~~~a~~~g~~~~~~~--~~~~~~p~~~~~~d~~l~~~~~~~~~ 329 (418)
T 1xmb_A 254 GGNAFNVIPDSITIGGTLRAFT--GFTQLQQRVKEVITKQAAVHRCNASVNL--TPNGREPMPPTVNNKDLYKQFKKVVR 329 (418)
T ss_dssp --------CCEEEEEEEEEESS--CHHHHHHHHHHHHHHHHHHTTEEEEEES--SGGGCCCBCCEEECHHHHHHHHHHHH
T ss_pred ecCcCCcCCCeEEEEEEEccCc--HHHHHHHHHHHHHHHHHHHhCCeEEEEE--ccCCcccCCCccCCHHHHHHHHHHHH
Confidence 9999999999999999999999 8999999999999998888888888876 344 7778889999999999999
Q ss_pred HhcCCcccccCCCCCCCchHHHHHhhcCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 352 DMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 352 ~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
+++|.+++......+|++|+++|.+.+|++++++|+.+.+ |....+|++||++++++|.+++++|+.++.
T Consensus 330 ~~~g~~~~~~~~~~~g~tD~~~~~~~~P~~~~~~G~~~~~-~~~~~~H~~~E~i~~~~l~~~~~~~~~~~~ 399 (418)
T 1xmb_A 330 DLLGQEAFVEAAPVMGSEDFSYFAETIPGHFSLLGMQDET-NGYASSHSPLYRINEDVLPYGAAIHASMAV 399 (418)
T ss_dssp HHHCGGGEEECCCBCCCCTHHHHHTTSCEEEEEEEEECTT-CCSCCTTCTTCCCCGGGHHHHHHHHHHHHH
T ss_pred HhcCCcceeccCCCCCcchHHHHHHHCCEEEEEEeCCCCC-CCCCCCCCCCCccCHHHHHHHHHHHHHHHH
Confidence 9779864322457889999999988899877667755411 224679999999999999999999998875
No 2
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=2.5e-59 Score=464.45 Aligned_cols=363 Identities=39% Similarity=0.646 Sum_probs=305.9
Q ss_pred HHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEec-ccCceEEEEECCC-CCcEEEEEEecccccCcCCCCCcc
Q 014490 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP-VAVTGVVGYIGTG-QPPFVALRADMDALAMEESVEWEH 127 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~-~~~~nvia~~~~~-~~~~ill~~H~Dtvp~~~~~~w~~ 127 (423)
+++++++++|++|||+|++|.++++||.++|+++|++++.+ .+++|++++++++ ++|+|+|.|||||||.+++..+||
T Consensus 32 ~~~i~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~nv~a~~~g~~~~~~i~l~~H~D~vp~~~~~~~Pf 111 (404)
T 1ysj_A 32 TRLINMRRDLHEHPELSFQEVETTKKIRRWLEEEQIEILDVPQLKTGVIAEIKGREDGPVIAIRADIDALPIQEQTNLPF 111 (404)
T ss_dssp HHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHTTCEECCCTTCSSCEEEEEECSSCCCEEEEEEECCCBSCCCCCCCTT
T ss_pred HHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHcCCceEEeccCCceEEEEEeCCCCCCEEEEEEecccccCCCCCCCCc
Confidence 78999999999999999999999999999999999988653 3467999999654 469999999999999987666677
Q ss_pred cCCCCCccccCCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCcccHHHHHhcCCCcccceeeeeccCCCCCCce
Q 014490 128 KSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSLFPVGT 207 (423)
Q Consensus 128 ~~~~~g~~~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg~~Ga~~~~~~~~~~~~d~~i~~~~~~~~p~g~ 207 (423)
....||++||||+|++++++|+|+++|++.+..++++|.|+|+++||++.|++.+++++.++++|+++++|.+++.+.|.
T Consensus 112 ~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~~G~~~~~~~g~~~~~d~~i~~h~ep~~~~g~ 191 (404)
T 1ysj_A 112 ASKVDGTMHACGHDFHTASIIGTAMLLNQRRAELKGTVRFIFQPAEEIAAGARKVLEAGVLNGVSAIFGMHNKPDLPVGT 191 (404)
T ss_dssp CCSSTTCBCTTSHHHHHHHHHHHHHHHHTCGGGCSSEEEEEEESCTTTTCHHHHHHHTTTTTTEEEEEEEEEETTSCTTE
T ss_pred ccCCCCceEcCcChHHHHHHHHHHHHHHhccccCCceEEEEEecccccchhHHHHHhcCCCcCCCEEEEEecCCCCCCce
Confidence 77778999999999999999999999999877899999999999999878999999988877789999988777666677
Q ss_pred EEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEecCCCCccCCCcE
Q 014490 208 VASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSV 287 (423)
Q Consensus 208 ~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gg~~~n~iP~~a 287 (423)
+....|..++|..+++|+++|+++|++.|+.|.|||..+++++.+|+.+..+..++...++++++.|+||.+.|+||++|
T Consensus 192 v~~~~g~~~~g~~~~~i~v~G~~~Has~P~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~vg~i~gG~~~NvIP~~a 271 (404)
T 1ysj_A 192 IGVKEGPLMASVDRFEIVIKGKGGHASIPNNSIDPIAAAGQIISGLQSVVSRNISSLQNAVVSITRVQAGTSWNVIPDQA 271 (404)
T ss_dssp EEECSEEEECCEEEEEEEEECC--------CCCCHHHHHHHHHHHHC-----------CCEEEEEEEEECSCSSSCCSEE
T ss_pred EEeccChhhcccceEEEEEEccCccccCcccCCCHHHHHHHHHHHHHHHHhhhcCCCCCcEEEEEEEEcCCCCceecCce
Confidence 66555555678999999999999999999999999999999999998876554455567899999999999999999999
Q ss_pred EEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCccccCHHHHHHHHHHHHHh-cCCcccccCCCCC
Q 014490 288 TIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADM-LGVQNIKENRPLM 366 (423)
Q Consensus 288 ~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-~g~~~~~~~~~~~ 366 (423)
++.+|+|++|.++.+++.++|++++++.+..++++++++. ...+|++..|+++++.++++++++ +|.++. . ..+
T Consensus 272 ~~~~diR~~~~~~~~~i~~~i~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~g~g~~~~--~-~~~ 346 (404)
T 1ysj_A 272 EMEGTVRTFQKEARQAVPEHMRRVAEGIAAGYGAQAEFKW--FPYLPSVQNDGTFLNAASEAAARLGYQTVHA--E-QSP 346 (404)
T ss_dssp EEEEEEECSSHHHHHHHHHHHHHHHHHHHHHTTCEEEEEE--EEEECCEEECGGGHHHHHHHHHHTTCEEEEC--C-CBS
T ss_pred EEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCEEEEEE--ecCCCCccCCHHHHHHHHHHHHHhcCCcccc--c-cCC
Confidence 9999999999999999999999999998888898888876 557778888889999999999998 776552 2 678
Q ss_pred CCchHHHHHhhcCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 367 GTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 367 g~tD~~~~~~~ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
|++|+++|.+.+|++++++| ||+...+|++||++++++|.+++++|+.++.
T Consensus 347 g~tD~~~~~~~~p~~~~~~G-----~~~~~~~H~~~E~v~~~~l~~~~~~~~~~~~ 397 (404)
T 1ysj_A 347 GGEDFALYQEKIPGFFVWMG-----TNGTEEWHHPAFTLDEEALTVASQYFAELAV 397 (404)
T ss_dssp SCCTHHHHHTTSCEEEEEEE-----CCCSSCTTCTTCCCCTTHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHCCeEEEEEc-----CCCCCCCCCCCCcCCHHHHHHHHHHHHHHHH
Confidence 99999999988998877788 4444679999999999999999999999875
No 3
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=100.00 E-value=7.3e-59 Score=466.29 Aligned_cols=374 Identities=26% Similarity=0.407 Sum_probs=299.4
Q ss_pred hHHHHhhcCchhHHHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEecc-------------------------
Q 014490 37 VKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPV------------------------- 91 (423)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~~------------------------- 91 (423)
+++.+++++.+ +++++++++|+++|+++++|.++++||.++|+++||+++...
T Consensus 3 ~~~~~~~~~~~--~~~~~~~~~lh~~Pe~~~~E~~t~~~i~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (445)
T 3io1_A 3 LQLDEYLRQLA--PSMTQWRRDFHLHAESGWLEFRTASKVADILDGLGYQLALGRDVIDADSRMGLPDEETLARAFERAR 80 (445)
T ss_dssp CCHHHHHHTTH--HHHHHHHHHHHHTCCCTTCCHHHHHHHHHHHHHTTCEEEEGGGTSCSTTCCSCCCHHHHHHHHHHHH
T ss_pred chHHHHHHHHH--HHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHCCCeEEecccccccccccccccchhhhhhhhhhc
Confidence 35677788777 999999999999999999999999999999999999987631
Q ss_pred --------------cCceEEEEECCC-CCcEEEEEEecccccCcCCCCCcc-------cCCCCCccccCCchHHHHHHHH
Q 014490 92 --------------AVTGVVGYIGTG-QPPFVALRADMDALAMEESVEWEH-------KSKVPGKMHACGHDAHVAMLLG 149 (423)
Q Consensus 92 --------------~~~nvia~~~~~-~~~~ill~~H~Dtvp~~~~~~w~~-------~~~~~g~~~grG~k~~~a~~l~ 149 (423)
+++||+|+++++ ++|+|+|.||||+||+++..+|++ .+..+|++||||+|++++++|+
T Consensus 81 ~~g~~~~~~~~~~~~~~~vva~~~~~~~g~~i~l~ah~Davp~~e~~~~~~~Pf~~~~~s~~~G~~h~cGhd~~~a~~l~ 160 (445)
T 3io1_A 81 EQGAPERWLPAFEGGFAGVVATLDTGRPGPTLAFRVDMDALDLNEQHDDSHRPHRDHFASCNAGMMHACGHDGHTAIGLG 160 (445)
T ss_dssp TTTCCTTTGGGGTTTCCCEEEEEECSSCCCEEEEEEECCCCCC-------------------------CTTCTHHHHHHH
T ss_pred cccccccccccccCCCCEEEEEEeCCCCCCEEEEEEecCCcCCCCCCCCCcCccccccccCCCCceEecCchHHHHHHHH
Confidence 568999999765 479999999999999998889963 3567899999999999999999
Q ss_pred HHHHHHhccccCCceEEEEEecCCCCcccHHHHHhcCCCcccceeeeeccCCCCCCceEEeecCcccCcceEEEEEEEeC
Q 014490 150 AAKMLQVFRHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGK 229 (423)
Q Consensus 150 a~~~l~~~~~~~~~~i~~~~~~~EEg~~Ga~~~~~~~~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~ 229 (423)
|+++|++.+..++++|.|+|+++||++.|++.|+++|.++++|+++++|+.++.|.|.+....+... |..+++|+++|+
T Consensus 161 aa~~L~~~~~~~~g~v~l~f~p~EE~~~Ga~~~i~~g~~~~~d~~~~~h~~~~~~~g~i~~~~~g~~-a~~~~~i~v~Gk 239 (445)
T 3io1_A 161 LAHVLKQYAAQLNGVIKLIFQPAEEGTRGARAMVAAGVVDDVDYFTAIHIGTGVPAGTVVCGGDNFM-ATTKFDVQFSGV 239 (445)
T ss_dssp HHHHHHHTGGGCCSEEEEEEESCTTTTCHHHHHHHTTTTTTCSEEEEEEEEEEEETTBEESCCCCBC-EEEEEEEEEECC
T ss_pred HHHHHHhCcCcCCceEEEEEeccccccchHHHHHHcCCccccceeEEEeccCCCCCCeEEEecCCee-EEEEEEEEEEee
Confidence 9999999887899999999999999888999999999988899999999876667787665432211 347999999999
Q ss_pred CCCC-CCCCCCCcHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEecCCCCccCCCcEEEEEEEecCChhhHHHHHHHH
Q 014490 230 GGHA-AIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRI 308 (423)
Q Consensus 230 ~~Hs-~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i 308 (423)
++|+ +.|+.|+|||..+++++.+|+.+. +..+ ...+++++.|+||.+.|+||++|++.+++|+.+.++.+++.++|
T Consensus 240 ~~HaGs~P~~g~nAi~~aa~~i~~l~~l~-~~~~--~~~~~~vg~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~i~~~i 316 (445)
T 3io1_A 240 AAHAGGKPEDGRNALLAAAQAALGLHAIP-PHSA--GASRVNVGVMQAGTGRNVVPSSALLKVETRGESEAINQYVFERA 316 (445)
T ss_dssp CSSTTCCGGGCCCHHHHHHHHHHHHHTCC-CBTT--BCEEEEEEEEEECSCTTSCCCEEEEEEEEEESSHHHHHHHHHHH
T ss_pred cCCCCCCCcCCcCHHHHHHHHHHHHHHHH-hhcC--CCeEEEEEEEecCCCCceeCCeEEEEEEEecCCHHHHHHHHHHH
Confidence 9998 689999999999999999999873 2222 35789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCeEEEEeeccCCCCccccCHHHHHHHHHHHHHhcCCccccc-CCCCCCCchHHHHHhhcC-----eEE
Q 014490 309 EEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKE-NRPLMGTEDFSFFAEAIP-----GYF 382 (423)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~g~~~~~~-~~~~~g~tD~~~~~~~ip-----~~~ 382 (423)
++++++.+..+++++++++ ...++++.+|+++++.+++++++++|.+.+.. ....+|++|+++|.+.+| ..+
T Consensus 317 ~~~~~~~a~~~g~~~~i~~--~~~~~~~~~d~~l~~~~~~a~~~~~g~~~v~~~~~~~~g~~D~~~~~~~~P~~gg~~~~ 394 (445)
T 3io1_A 317 QHVVAGAAAMYEARYELRM--MGAATASAPSPAWVDYLREQAARVPGVQQAVDRIAAPAGSEDATLMMARVQARGGLASY 394 (445)
T ss_dssp HHHHHHHHHHTTCEEEEEE--EEEECCCCCCHHHHHHHHHHHHHSTTCCBCBSSCCCCCBCCTHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHhCCeEEEEE--ecCCCCcCCCHHHHHHHHHHHHHhcCCccceecCCCCccHHHHHHHHHHhcccCCceEE
Confidence 9999999999999999887 56778888899999999999999877754322 223589999999998876 556
Q ss_pred EEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHhC
Q 014490 383 YYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATS 423 (423)
Q Consensus 383 ~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~~ 423 (423)
+++|+ |+....|++||++++++|..++++|+.++.+
T Consensus 395 ~~~G~-----~~~~~~H~~~E~i~~~~l~~g~~~~~~~~~~ 430 (445)
T 3io1_A 395 MIFGT-----ELSAGHHNEKFDFDESVMAVAVETLARVALN 430 (445)
T ss_dssp EEEEE-----EC-----------CCCHHHHHHHHHHHHHHT
T ss_pred EEEeC-----CCCCCCCCCCCcCCHHHHHHHHHHHHHHHHH
Confidence 66774 3335699999999999999999999998863
No 4
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=100.00 E-value=1.1e-54 Score=435.30 Aligned_cols=368 Identities=13% Similarity=0.127 Sum_probs=306.6
Q ss_pred hccccchHHHHhhcCchhHHHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEec--------------------
Q 014490 31 ELTQIPVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP-------------------- 90 (423)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~-------------------- 90 (423)
.++...+++.++++.++ +++++++++|+++||+|++|.++++||.++|+++|++++..
T Consensus 9 ~~~~~~~~i~~~i~~~~--~~~~~~l~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (433)
T 3pfo_A 9 KSDAITQSLRAAVDRNF--NDQVAFLQRMVQFRSVRGEEAPQQEWLAQQFADRGYKVDTFSLADVDIASHPKAAPMDTID 86 (433)
T ss_dssp HHHHHHHHHHHHHHHHH--HHHHHHHHHHHTSCCBTTCCHHHHHHHHHHHHHTTCEEEEEETGGGTGGGSTTCCCCTTCC
T ss_pred cCHHHHHHHHHHHHhhH--HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHCCCceEEEecchhhhhcccccccccccc
Confidence 34455677889998877 99999999999999999999999999999999999988652
Q ss_pred -ccCceEEEEECCC-CCcEEEEEEecccccCcCCCCCccc----CCCCCccccCCc---hHHHHHHHHHHHHHHhccccC
Q 014490 91 -VAVTGVVGYIGTG-QPPFVALRADMDALAMEESVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEI 161 (423)
Q Consensus 91 -~~~~nvia~~~~~-~~~~ill~~H~Dtvp~~~~~~w~~~----~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~ 161 (423)
+.++||+|+++++ ++|+|+|+|||||||.++...|..+ .+++|++||||+ |++++++|+|+++|++.+..+
T Consensus 87 ~~~~~~via~~~g~~~~~~v~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~~~a~~l~a~~~l~~~~~~~ 166 (433)
T 3pfo_A 87 PAGSMQVVATADSDGKGRSLILQGHIDVVPEGPVDLWSDPPYEAKVRDGWMIGRGAQDMKGGVSAMIFALDAIRTAGYAP 166 (433)
T ss_dssp GGGCEEEEEEECCCCCSCCEEEEEECCBCCCCCGGGCSSCTTTCCEETTEEECTTTTTTHHHHHHHHHHHHHHHHTTEEE
T ss_pred CCCCcEEEEEEecCCCCCEEEEEcccCCcCCCCcccCCCCCCCcEEECCEEEecchhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 4578999999754 4699999999999999988888643 367899999998 899999999999999988788
Q ss_pred CceEEEEEecCCC-CcccHHHHHhcCCCcccceeeeeccCCCCCCc-eEEeecCcccCcceEEEEEEEeCCCCCCCCCCC
Q 014490 162 KGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLFPVG-TVASRPGPTLAAGGFFEAVINGKGGHAAIPQHT 239 (423)
Q Consensus 162 ~~~i~~~~~~~EE-g~~Ga~~~~~~~~~~~~d~~i~~~~~~~~p~g-~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g 239 (423)
+++|.|+|+++|| ++.|++.+++++. ++|++++.+ |++ .+ ..+++|..+++|+++|+++|+|.|+.|
T Consensus 167 ~~~v~~~~~~~EE~g~~G~~~~~~~~~--~~d~~i~~e-----p~~~~i----~~~~~G~~~~~i~v~G~~~Ha~~p~~g 235 (433)
T 3pfo_A 167 DARVHVQTVTEEESTGNGALSTLMRGY--RADACLIPE-----PTGHTL----TRAQVGAVWFRLRVRGTPVHVAYSETG 235 (433)
T ss_dssp SSCEEEEEESCTTTTCHHHHHHHHTTC--CCSEEEECC-----CCSSCE----EEEECEEEEEEEEEECCCCBGGGGGGS
T ss_pred CccEEEEEEecCccCChhHHHHHhcCC--CCCEEEEeC-----CCCCce----EEecceEEEEEEEEEcCCCccCCCCcC
Confidence 9999999999999 7789999988764 567877643 333 22 234579999999999999999999999
Q ss_pred CcHHHHHHHHHHHHHHhhccc-----CCC-----CCCceEEEEEEecCCCCccCCCcEEEEEEEecCChhhHHHHHHHHH
Q 014490 240 IDPIVAASNVIVSLQHLVSRE-----ADP-----LDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIE 309 (423)
Q Consensus 240 ~nAi~~~~~~i~~l~~~~~~~-----~~~-----~~~~t~~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~ 309 (423)
.||+..+++++..|+.+..+. .++ ....+++++.|+||...|+||++|++.+++|++|+++.+++.++|+
T Consensus 236 ~nAi~~~~~~i~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~vg~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~~~~~i~ 315 (433)
T 3pfo_A 236 TSAILSAMHLIRAFEEYTKELNAQAVRDPWFGQVKNPIKFNVGIIKGGDWASSTAAWCELDCRLGLLTGDTPQEAMRGIE 315 (433)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHGGGCTTTTTSSSCSCEEEEEEEECSCTTBCCCEEEEEEEEEECTTCCHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHhhhccccCccccccCCCceEEeeeEECCCCCcccCcEEEEEEEEecCCCCCHHHHHHHHH
Confidence 999999999999998875422 122 2346899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcC----CeEEEEeeccCCCCcc--ccCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhh--cCeE
Q 014490 310 EVVMKQASVQR----CNATVTFDDKSFYPVT--VNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA--IPGY 381 (423)
Q Consensus 310 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~--ip~~ 381 (423)
+++++.+.+++ .++++++. ...+|++ +.|+++++.+.+++++.+|.++. ....+|++|+++|.+. +|++
T Consensus 316 ~~~~~~~~~~~~~~~~~~~v~~~-~~~~p~~~~~~d~~~~~~~~~a~~~~~G~~~~--~~~~~g~~D~~~~~~~~giP~v 392 (433)
T 3pfo_A 316 KCLADAQATDSFLSENPAELVWS-GFQADPAVCEPGGVAEDVLTAAHKAAFNAPLD--ARLSTAVNDTRYYSVDYGIPAL 392 (433)
T ss_dssp HHHHHHHTTCHHHHHSCCEEEEE-EEEECCEECCTTCHHHHHHHHHHHHHHSSCCC--EEEESSCCTHHHHHHTTCCCEE
T ss_pred HHHHHHhhhCcccccCCeEEEEe-cccCCcccCCCCCHHHHHHHHHHHHHhCCCCc--eeeeeeeccHHHHHhhCCCCEE
Confidence 99998876543 34555542 1344554 34788999999999997798653 3467899999999874 9976
Q ss_pred EEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 382 FYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 382 ~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
+ +| || ...+|++||++++++|.+++++|+.++.
T Consensus 393 ~--~G-----p~-~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 425 (433)
T 3pfo_A 393 C--YG-----PY-GQGPHAFDERIDLESLRKTTLSIALFVA 425 (433)
T ss_dssp E--CC-----CC-EECTTSTTCEEEHHHHHHHHHHHHHHHH
T ss_pred E--EC-----CC-CccCCCCCceEEHHHHHHHHHHHHHHHH
Confidence 5 55 33 2469999999999999999999999875
No 5
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=100.00 E-value=2.3e-52 Score=412.73 Aligned_cols=352 Identities=23% Similarity=0.331 Sum_probs=303.3
Q ss_pred hHHHHhhcCchhHHHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEeccc--CceEEEEECCC-CCcEEEEEEe
Q 014490 37 VKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVA--VTGVVGYIGTG-QPPFVALRAD 113 (423)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~~~--~~nvia~~~~~-~~~~ill~~H 113 (423)
+++.+++++.+ +++++++++|+++||+|++|.++++||.++|+++|++++.+.. ++|++|+++++ ++|+|+|.+|
T Consensus 5 ~~i~~~~~~~~--~~~~~~~~~l~~~pe~s~~E~~~~~~i~~~l~~~G~~v~~~~~g~~~~via~~~g~~~g~~i~l~ah 82 (394)
T 3ram_A 5 QQILDYIETNK--YSYIEISHRIHERPELGNEEIFASRTLIDRLKEHDFEIETEIAGHATGFIATYDSGLDGPAIGFLAE 82 (394)
T ss_dssp HHHHHHHHHTH--HHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHTTCEEEEEETTEEEEEEEEEECSSSSCEEEEEEC
T ss_pred HHHHHHHHHHH--HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHcCCeEEeCCCCCceEEEEEEeCCCCCCEEEEEEe
Confidence 45777777766 9999999999999999999999999999999999999877433 57999999664 4699999999
Q ss_pred cccccCcCCCCCcccCCCCCccccCCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-C-cccHH-HHHhcCCCcc
Q 014490 114 MDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-G-GGGAK-KMLDAGALEN 190 (423)
Q Consensus 114 ~Dtvp~~~~~~w~~~~~~~g~~~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g-~~Ga~-~~~~~~~~~~ 190 (423)
||||| |++||||+|.+.+++|.|+++|++.+..++++|.|+|+++|| + ..|++ .+++.|.+++
T Consensus 83 ~D~vp--------------g~~ha~G~d~~~a~~l~aa~~L~~~~~~~~g~v~~~f~~~EE~~~~~Ga~~~~~~~g~~~~ 148 (394)
T 3ram_A 83 YDALP--------------GLGHACGHNIIGTASVLGAIGLKQVIDQIGGKVVVLGCPAEEGGENGSAKASYVKAGVIDQ 148 (394)
T ss_dssp CCCCT--------------TTSSTTCHHHHHHHHHHHHHHHHTTHHHHCSEEEEEECCCTTCCTTCCHHHHHHHHTGGGG
T ss_pred cccCC--------------CcceECCccHHHHHHHHHHHHHHHhHhhCCceEEEEEECCccCCCCCchHHHHHHcCCccc
Confidence 99999 778999999989999999999998877799999999999999 4 37999 9999998888
Q ss_pred cceeeeeccCCCCCCceEEeecCcccCcceEEEEEEEeCCCCCC-CCCCCCcHHHHHHHHHHHHHHhhcccCCCCCCceE
Q 014490 191 VEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAA-IPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVL 269 (423)
Q Consensus 191 ~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~-~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~ 269 (423)
+|+++++|+.++. ..+..++|..+|+|+++|+++|+| .|+.|+|||..+++++..|+.+.... ...+++
T Consensus 149 ~d~~~~~h~~~~~-------~~~~~~~g~~~~~i~v~Gk~~Ha~~~P~~g~nAi~~a~~~i~~l~~l~~~~---~~~~~~ 218 (394)
T 3ram_A 149 IDIALMIHPGNET-------YKTIDTLAVDVLDVKFYGKSAHASENADEALNALDAMISYFNGVAQLRQHI---KKDQRV 218 (394)
T ss_dssp CSEEECCEEESSB-------BCCCCBCEEEEEEEEEECBCCBHHHHGGGCBCHHHHHHHHHHHHHHHGGGS---CTTCEE
T ss_pred CCEEEEECCcccc-------CCCccccceeEEEEEEEccccccCCCCcCCCCHHHHHHHHHHHHHHHHhhC---CCCCee
Confidence 9999998865431 234566799999999999999999 89999999999999999999885322 123578
Q ss_pred EEEEEecCCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCccccCHHHHHHHHHH
Q 014490 270 TVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKV 349 (423)
Q Consensus 270 ~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~ 349 (423)
+++.++||.+.|+||++|++.+++|..+.++.+++.++|++++++.+..+++++++++. ...+|++.+|+++++.++++
T Consensus 219 ~~~~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~i~~~i~~~~~~~a~~~g~~~ei~~~-~~~~~~~~~d~~l~~~~~~a 297 (394)
T 3ram_A 219 HGVILDGGKAANIIPDYTHARFYTRAMTRKELDILTEKVNQIARGAAIQTGCDYEFGPI-QNGVNEFIKTPKLDDLFAKY 297 (394)
T ss_dssp EEEEEEBCSCTTBCCSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTCEEEEEES-SCCBCCCCCCHHHHHHHHHH
T ss_pred EEEEEECCCCCceeCCeEEEEEEEeeCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEe-cCCCCCccCCHHHHHHHHHH
Confidence 88899999999999999999999999999999999999999999999989999888862 46788888999999999999
Q ss_pred HHHhcCCcccccCCCCCCCchHHHHHhhcCeEEEEeccCCCCCCCCCCCCCCCcc-------CCCCchHHHHHHHHHHHh
Q 014490 350 AADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFR-------VNEDALPYGAALHASLAT 422 (423)
Q Consensus 350 ~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~g~~~~~pg~~~~~H~~~E~-------i~~~~l~~~~~~~~~~i~ 422 (423)
++++ | ..+......+|++|+++|.+.+|++++++|... + ....|++ |+ ++.+++..++++++.++.
T Consensus 298 ~~~~-G-~~~~~~~~~~g~~D~~~~~~~~P~~~~~~g~~~---~-~~~~H~~-ef~~~~~~~~~~~~l~~g~~~la~~~~ 370 (394)
T 3ram_A 298 AEEV-G-EAVIDDDFGYGSTDTGNVSHVVPTIHPHIKIGS---R-NLVGHTH-RFREAAASVHGDEALIKGAKIMALMGL 370 (394)
T ss_dssp HHHT-T-CCBCCSCCCCBCCTHHHHTTTSCBCCCEEECSC---T-TCCTTSH-HHHHHTTSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHh-C-cccccCCCCcccccHHHHHHHhchheEEeeecC---C-CCCCCCH-HHHhccCCCccHHHHHHHHHHHHHHHH
Confidence 9985 8 443234578899999999988999877777643 2 1368999 66 499999999999998875
No 6
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=7.6e-53 Score=416.64 Aligned_cols=363 Identities=18% Similarity=0.192 Sum_probs=300.5
Q ss_pred ccchHHHHhhcCchhHHHHHHHHHHhHhCCCCCCCc---HHHHHHHHHHHHhCCCCeEecc-----cCceEEEEECCCCC
Q 014490 34 QIPVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQE---FETSKLIRAELDQMGIPYKFPV-----AVTGVVGYIGTGQP 105 (423)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~E---~~~~~~l~~~l~~~g~~~~~~~-----~~~nvia~~~~~~~ 105 (423)
...+++.++++.++ +++++++++|++|||+|++| .++++||.++|+++|++++... .++|++++++++++
T Consensus 5 ~~~~~~~~~~~~~~--~~~~~~l~~lv~i~s~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~v~a~~~g~~~ 82 (393)
T 1cg2_A 5 KRDNVLFQAATDEQ--PAVIKTLEKLVNIETGTGDAEGIAAAGNFLEAELKNLGFTVTRSKSAGLVVGDNIVGKIKGRGG 82 (393)
T ss_dssp CCCHHHHHHHHHHH--HHHHHHHHHHHTSCCBTTCHHHHHHHHHHHHHHHHHTTCEEEEEECSTTCCSEEEEEEEECSSC
T ss_pred chhhHHHHHHHhhH--HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEecCcCCCCCeEEEEECCCCC
Confidence 45668888888877 89999999999999999886 6899999999999999987643 35699999975445
Q ss_pred cEEEEEEecccccCc-CCCCCcccCCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHH
Q 014490 106 PFVALRADMDALAME-ESVEWEHKSKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAK 180 (423)
Q Consensus 106 ~~ill~~H~Dtvp~~-~~~~w~~~~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~ 180 (423)
|+|+|.+||||||.. +...|||. .+||++||||+ |++++++|+|+++|++.+..++++|.|+|+++|| |+.|++
T Consensus 83 ~~i~l~aH~D~vp~~~~~~~~Pf~-~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~G~~ 161 (393)
T 1cg2_A 83 KNLLLMSHMDTVYLKGILAKAPFR-VEGDKAYGPGIADDKGGNAVILHTLKLLKEYGVRDYGTITVLFNTDEEKGSFGSR 161 (393)
T ss_dssp CCEEEEEECCBSCCTTHHHHSCCE-EETTEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEEESCGGGTTTTTH
T ss_pred ceEEEEEecCcCCCCCccccCCee-eeCCEEEcCCcccchHHHHHHHHHHHHHHhcCCCCCCCEEEEEEcccccCCccHH
Confidence 899999999999864 44567887 56799999996 7999999999999999887788899999999999 778999
Q ss_pred HHHhcCCCcccceeeeeccCCCCCCceEEeecCcccCcceEEEEEEEeCCCCCC-CCCCCCcHHHHHHHHHHHHHHhhcc
Q 014490 181 KMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAA-IPQHTIDPIVAASNVIVSLQHLVSR 259 (423)
Q Consensus 181 ~~~~~~~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~-~p~~g~nAi~~~~~~i~~l~~~~~~ 259 (423)
.+++++. .++|+++++++.. .+.+.+. .+++|..+++|+++|+++||| .|+.|.|||..+++++.+|+.+..
T Consensus 162 ~~~~~~~-~~~d~~i~~e~~~-~~~~~i~----~~~~G~~~~~i~v~G~~~Hag~~p~~g~nAi~~~~~~i~~l~~~~~- 234 (393)
T 1cg2_A 162 DLIQEEA-KLADYVLSFEPTS-AGDEKLS----LGTSGIAYVQVNITGKASHAGAAPELGVNALVEASDLVLRTMNIDD- 234 (393)
T ss_dssp HHHHHHH-HHCSEEEECCCEE-TTSCEEE----SEECEEEEEEEEEECBCEETTSCGGGSBCHHHHHHHHHHHHGGGCB-
T ss_pred HHHHHHh-hcCCEEEEeCCCC-CCCCcEE----EeeeeeEEEEEEEEeeecccCCCcccCcCHHHHHHHHHHHHHhhhC-
Confidence 9987643 3567888765321 0234332 335699999999999999997 799999999999999999988742
Q ss_pred cCCCCCCceEEEEEEecCCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCcccc-
Q 014490 260 EADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVN- 338 (423)
Q Consensus 260 ~~~~~~~~t~~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 338 (423)
+....+++++.|+||...|+||++|++.+|+|++|.++.+++.++|++++++ +...+++++++. ...+|++..
T Consensus 235 ---~~~~~~~~v~~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~i~~~i~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~ 308 (393)
T 1cg2_A 235 ---KAKNLRFNWTIAKAGNVSNIIPASATLNADVRYARNEDFDAAMKTLEERAQQ-KKLPEADVKVIV--TRGRPAFNAG 308 (393)
T ss_dssp ---TTTTEEEEEEEEEECSSTTEECSEEEEEEEEEESSHHHHHHHHHHHHHHHTS-CSSTTCEEEEEE--EECSCCEECH
T ss_pred ---cccCceEEEEEEeCCCCCCEECcccEEEEEEeeCChhhHHHHHHHHHHHHhc-ccCCCcEEEEEe--ccccCCccCC
Confidence 3345899999999999999999999999999999999999999999999876 333577788776 456677654
Q ss_pred --CHHHHHHHHHHHHHhcCCcccccCCC-CCCCchHHHHHhh-cCeEEEEeccCCCCCCCCCCCCC-CCccCCCCchHHH
Q 014490 339 --NKNLHEHFQKVAADMLGVQNIKENRP-LMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHS-PYFRVNEDALPYG 413 (423)
Q Consensus 339 --d~~~~~~l~~~~~~~~g~~~~~~~~~-~~g~tD~~~~~~~-ip~~~~~~g~~~~~pg~~~~~H~-~~E~i~~~~l~~~ 413 (423)
++++++.+++++++. |.++ .... .+|++|+++|... +|++ +++|+.. ..+|+ +||++++++|.++
T Consensus 309 ~~~~~l~~~~~~~~~~~-g~~~--~~~~~~~g~tD~~~~~~~giP~~-~~~G~~~------~~~H~~~~E~i~~~~l~~~ 378 (393)
T 1cg2_A 309 EGGKKLVDKAVAYYKEA-GGTL--GVEERTGGGTDAAYAALSGKPVI-ESLGLPG------FGYHSDKAEYVDISAIPRR 378 (393)
T ss_dssp HHHHHHHHHHHHHHHHT-TCCC--EEESCBSCCCTHHHHGGGSCCEE-CCCSCEE------ECTTSSSCCEEEGGGHHHH
T ss_pred cchHHHHHHHHHHHHHh-CCCC--ccccCCCcccHHHHHHhCCCCEE-EeCCCCC------CCccCCCcceEEehhHHHH
Confidence 377999999999875 8754 2345 7799999999988 8976 3566422 35899 9999999999999
Q ss_pred HHHHHHHHh
Q 014490 414 AALHASLAT 422 (423)
Q Consensus 414 ~~~~~~~i~ 422 (423)
+++|+.++.
T Consensus 379 ~~~~~~~~~ 387 (393)
T 1cg2_A 379 LYMAARLIM 387 (393)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999875
No 7
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=100.00 E-value=5.9e-52 Score=410.63 Aligned_cols=356 Identities=21% Similarity=0.213 Sum_probs=294.3
Q ss_pred chHHHHhhcCchhHHHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEecc-------cCceEEEEECCC----C
Q 014490 36 PVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPV-------AVTGVVGYIGTG----Q 104 (423)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~~-------~~~nvia~~~~~----~ 104 (423)
.+.+..+++.++ +++++++++|++|||+|++|.++++||.++|+++|++++.+. .++|++|+++++ +
T Consensus 12 ~~~~~~~~~~~~--~~~~~~l~~L~~ips~s~~E~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nvia~~~g~~~~~~ 89 (396)
T 3rza_A 12 HENLYFQGMINE--QRLLNTFLELVQIDSETGNESTIQPILKEKFIALGLDVKEDEAAKHPKLGANNLVCTMNSTIEEGE 89 (396)
T ss_dssp -------CCSCH--HHHHHHHHHHHTSCCBTTCTTTHHHHHHHHHHHTTCEEEECSGGGSTTCSSCCEEEEECCCCC---
T ss_pred ccceeEEEeecH--HHHHHHHHHHeecCCCCcCHHHHHHHHHHHHHHCCCEEEEeccccccCCCCceEEEEECCcCCCCC
Confidence 445667778877 999999999999999999999999999999999999987743 268999999764 4
Q ss_pred CcEEEEEEecccccCcCCCCCcccCCCCCccccCCc-------hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Cc
Q 014490 105 PPFVALRADMDALAMEESVEWEHKSKVPGKMHACGH-------DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG 176 (423)
Q Consensus 105 ~~~ill~~H~Dtvp~~~~~~w~~~~~~~g~~~grG~-------k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~ 176 (423)
+|+|+|.|||||||.++ .|+...+.+|++||||+ |++++++|+|+++|++.+. ++++|.|+|+++|| |+
T Consensus 90 ~~~i~l~aH~D~vp~g~--~~~p~~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~-~~~~v~~~~~~~EE~g~ 166 (396)
T 3rza_A 90 VPKLYLTSHMDTVVPAI--NVKPIVKDDGYIYSDGTTILGADDKAGLAAMLEVLQVIKEQQI-PHGQIQFVITVGEESGL 166 (396)
T ss_dssp CCCEEEEEECCBCSSCS--SCCCEECTTSEEECCSSSCCCHHHHHHHHHHHHHHHHHHHHTC-CCCCEEEEEESCGGGTS
T ss_pred CCeEEEEEECCccCCCC--CcceEEecCCEEECCCccccCcccHHHHHHHHHHHHHHHhcCC-CCCCEEEEEEccccccc
Confidence 69999999999999875 56433444599999996 5999999999999998763 68999999999999 77
Q ss_pred ccHHHHHhcCCCcccceeeeeccCCCCCCceEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 014490 177 GGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHL 256 (423)
Q Consensus 177 ~Ga~~~~~~~~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~ 256 (423)
.|++.+..++. ..++. ++.+++.+.+.+... .+|..+++|+++|+++|+|.|+.|+||+..+++++.+|+..
T Consensus 167 ~Ga~~~~~~~~--~~~~~--~~~~~~~~~g~i~~~----~~g~~~~~i~v~G~~~Ha~~p~~g~nai~~~~~~i~~l~~~ 238 (396)
T 3rza_A 167 IGAKELNSELL--DADFG--YAIDASADVGTTVVG----APTQMLISAKIIGKTAHASTPKEGVSAINIAAKAISRMKLG 238 (396)
T ss_dssp HHHHHCCGGGC--CCSEE--EEEEESSCTTCEEEE----ECEEEEEEEEEECBCCBTTSGGGSBCHHHHHHHHHHHSCCE
T ss_pred HhHhhhchhhc--ccceE--EEEecCCCcceEEEc----CCceEEEEEEEEeEecCCCCccccccHHHHHHHHHHhcccC
Confidence 89999865432 23344 444555566665543 35889999999999999999999999999999999998753
Q ss_pred hcccCCCCCCceEEEEEEecCCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCcc
Q 014490 257 VSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVT 336 (423)
Q Consensus 257 ~~~~~~~~~~~t~~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (423)
. .+ ...+++++.|+||.+.|+||++|++.+|+|+.|.++.+.+.++|++++++.+..+++++++++ ...+|++
T Consensus 239 ~---~~--~~~~~~vg~i~gG~~~NvIP~~a~~~~diR~~~~~~~~~~~~~i~~~~~~~a~~~g~~~~i~~--~~~~p~~ 311 (396)
T 3rza_A 239 Q---VD--EITTANIGKFHGGSATNIVADEVILEAEARSHDPERIKTQVKHMTDVFETTASELGGKAEVTV--EQSYPGF 311 (396)
T ss_dssp E---EE--TTEEEEEEEEEECSCTTBCCCEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCEEEEEE--EEEECCE
T ss_pred C---CC--CCceeeeeEEecCCCCcccCceEEEEEEEEeCCHHHHHHHHHHHHHHHHHHHHhcCCEEEEEE--EeccCCc
Confidence 1 12 247899999999999999999999999999999999999999999999999988899988887 5667776
Q ss_pred --ccCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhh-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHH
Q 014490 337 --VNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYG 413 (423)
Q Consensus 337 --~~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~ 413 (423)
++|+++++.+++++++. |.++ .....+|++|+++|.+. +|++++++|. ..+|++||++++++|.++
T Consensus 312 ~~~~d~~l~~~~~~~~~~~-g~~~--~~~~~~g~tD~~~~~~~giP~~~~g~g~--------~~~H~~~E~v~~~~l~~~ 380 (396)
T 3rza_A 312 KINDNEAVVKIAQESARNL-GLSA--NTIISGGGSDGSIINTFGIPSVILGVGY--------EKIHTTNERMPIKSLNLL 380 (396)
T ss_dssp ECCTTSHHHHHHHHHHHHT-TCCC--CEEECSSCCHHHHHGGGTCCEEEEECCC--------BSTTSTTCEEEHHHHHHH
T ss_pred ccCCCcHHHHHHHHHHHHc-CCCc--eecccceeccHHHHhhCCCcEEEECCCC--------CCCCCCcceeEHHHHHHH
Confidence 45789999999999986 8765 33467899999999988 9988766542 259999999999999999
Q ss_pred HHHHHHHHh
Q 014490 414 AALHASLAT 422 (423)
Q Consensus 414 ~~~~~~~i~ 422 (423)
+++|+.++.
T Consensus 381 ~~~~~~~~~ 389 (396)
T 3rza_A 381 ASQVLEIIK 389 (396)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999875
No 8
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=9.9e-52 Score=408.64 Aligned_cols=354 Identities=18% Similarity=0.249 Sum_probs=287.5
Q ss_pred HHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEec--ccCceEEEEECCCCCcEEEEEEecccccCcCCCCCc-
Q 014490 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP--VAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWE- 126 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~--~~~~nvia~~~~~~~~~ill~~H~Dtvp~~~~~~w~- 126 (423)
+++++++++|++|||+|++|.++++||.++|+++|++++.. +..+|++++++ .++|+|+|.+||||||.++..+|.
T Consensus 6 ~~~~~~l~~lv~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~g-~~~~~i~l~~H~D~Vp~~~~~~w~~ 84 (393)
T 1vgy_A 6 TQSLELAKELISRPSVTPDDRDCQKLMAERLHKIGFAAEEMHFGNTKNIWLRRG-TKAPVVCFAGHTDVVPTGPVEKWDS 84 (393)
T ss_dssp SHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHTTTCEEEECCBTTBCEEEEEEC-SSSSEEEEEEECCBCCCCCGGGSSS
T ss_pred HHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHHHcCCcEEEEecCCCcEEEEEEC-CCCCEEEEEcccCCcCCCCcccCCC
Confidence 56899999999999999999999999999999999988763 45789999994 346999999999999998878895
Q ss_pred --cc-CCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-C-cccHHHHHhcCCC--cccceeee
Q 014490 127 --HK-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-G-GGGAKKMLDAGAL--ENVEAIFG 196 (423)
Q Consensus 127 --~~-~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g-~~Ga~~~~~~~~~--~~~d~~i~ 196 (423)
|. .++||++||||+ |++++++|.|+++|++.+..++++|+|+|+++|| + ..|++.+++.... ..+|++++
T Consensus 85 ~Pf~~~~~~g~l~grG~~D~k~~~aa~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~~~~Ga~~~~~~~~~~~~~~d~~i~ 164 (393)
T 1vgy_A 85 PPFEPAERDGRLYGRGAADMKTSIACFVTACERFVAKHPNHQGSIALLITSDEEGDALDGTTKVVDVLKARDELIDYCIV 164 (393)
T ss_dssp CTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSCCTTSHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCceEEECCEEEecCcccchHHHHHHHHHHHHHHHhcCCCCCcEEEEEEeccccCCcCCHHHHHHHHHhcCcCCCEEEE
Confidence 44 357899999998 7999999999999998777789999999999999 3 3799988764322 14677776
Q ss_pred eccCCCCCCceEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhccc-CCCCCCceEEEEEEe
Q 014490 197 LHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSRE-ADPLDSQVLTVAKFE 275 (423)
Q Consensus 197 ~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~-~~~~~~~t~~v~~i~ 275 (423)
.++.+..+.+... ..+.+|..+++|+++|+++|++.|+.|.|||..+++++.+|+.+..+. .+...+.+++++.|+
T Consensus 165 ~e~~~~~~~g~~i---~~g~~G~~~~~i~v~G~~~Ha~~P~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~v~~i~ 241 (393)
T 1vgy_A 165 GEPTAVDKLGDMI---KNGRRGSLSGNLTVKGKQGHIAYPHLAINPVHTFAPALLELTQEVWDEGNEYFPPTSFQISNIN 241 (393)
T ss_dssp CCCCBSSSTTSEE---ECEECEEEEEEEEEECBCEETTCGGGCBCHHHHHHHHHHHHHHCCCCCCCSSCCCCEEEEEEEE
T ss_pred eCCCCcccCCcee---EEeeeeEEEEEEEEEccCcccCCCccCCCHHHHHHHHHHHhhcccccccccccCCCeEEEeeEc
Confidence 5543322233321 133579999999999999999999999999999999999998865322 223455799999999
Q ss_pred cCC-CCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCccccCHHHHHHHHHHHHHhc
Q 014490 276 GGG-AFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADML 354 (423)
Q Consensus 276 gg~-~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~ 354 (423)
||. ..|+||++|++.+|+|++|.++.+++.++|++++++ ++.++++++.. ...|...+++++++.+.+++++.+
T Consensus 242 gG~~~~NviP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~----~~~~~~~~~~~-~~~p~~~~~~~l~~~~~~~~~~~~ 316 (393)
T 1vgy_A 242 GGTGATNVIPGELNVKFNFRFSTESTEAGLKQRVHAILDK----HGVQYDLQWSC-SGQPFLTQAGKLTDVARAAIAETC 316 (393)
T ss_dssp ECCSCTTEECSEEEEEEEEEECTTSCHHHHHHHHHHHHHH----TTCCEEEEEEE-EECCEECCSSHHHHHHHHHHHHHH
T ss_pred CCCCCCcccCCeEEEEEEEecCCCCCHHHHHHHHHHHHHH----hCCCeEEEEec-CCCcccCCCcHHHHHHHHHHHHHc
Confidence 997 899999999999999999999999999999988864 35666666521 223334457889999999999988
Q ss_pred CCcccccCCCCCCCchHHHHHhh-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 355 GVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 355 g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
|.++. ....+|++|+++|.+. +|++. +|+.+ ..+|++||+++++++.+++++|+.++.
T Consensus 317 g~~~~--~~~~~g~~D~~~~~~~~~P~v~--~Gp~~------~~~H~~~E~i~~~~l~~~~~~~~~~l~ 375 (393)
T 1vgy_A 317 GIEAE--LSTTGGTSDGRFIKAMAQELIE--LGPSN------ATIHQINENVRLNDIPKLSAVYEGILV 375 (393)
T ss_dssp SSCCE--EECCSCCCTHHHHGGGEEEEEE--CCSBC------TTTTSTTCEEETTHHHHHHHHHHHHHH
T ss_pred CCCce--EecCCccchHHHHHhCCCCEEE--ECCCC------CCCCCCCCceeHHHHHHHHHHHHHHHH
Confidence 98763 3467889999999985 88543 56432 358999999999999999999999875
No 9
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=100.00 E-value=1.2e-51 Score=405.81 Aligned_cols=354 Identities=18% Similarity=0.217 Sum_probs=281.2
Q ss_pred HHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEe--cccCceEEEEECCCCCcEEEEEEecccccCcCCCCCcc
Q 014490 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKF--PVAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWEH 127 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~--~~~~~nvia~~~~~~~~~ill~~H~Dtvp~~~~~~w~~ 127 (423)
+++++++++|+++||+|++|.++++||.++|+++|++++. .+..+|++|+++ .++|+|+|.|||||||.++.+.|..
T Consensus 3 ~~~~~~~~~L~~~ps~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~n~~a~~g-~~~~~i~l~aH~D~vp~~~~~~w~~ 81 (377)
T 3isz_A 3 EKVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWAKHG-TSEPVIAFAGHTDVVPTGDENQWSS 81 (377)
T ss_dssp HHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHHTTCEEEECCBTTBCEEEEEEE-SSSCEEEEEEECCBCCCCCGGGCSS
T ss_pred hHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHCCCceEEeecCCCceEEEEeC-CCCCEEEEeccccccCCCCcccCCC
Confidence 6789999999999999999999999999999999999875 345789999984 4469999999999999988778864
Q ss_pred c---C-CCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Cc-ccHHHHHhcCCC--cccceeee
Q 014490 128 K---S-KVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG-GGAKKMLDAGAL--ENVEAIFG 196 (423)
Q Consensus 128 ~---~-~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~-~Ga~~~~~~~~~--~~~d~~i~ 196 (423)
+ . ++||++||||+ |++++++|.+++.|++.+..++++|.|+|+++|| ++ .|++.+++.... ..+|++++
T Consensus 82 ~pf~~~~~~g~~~g~G~~D~k~g~~~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~~~~G~~~~~~~~~~~~~~~d~~~~ 161 (377)
T 3isz_A 82 PPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVETLMARDEKITYCMV 161 (377)
T ss_dssp CTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSCCSSSHHHHHHHHHHTTCCCCEEEE
T ss_pred CCCCcEEECCEEEeCChhhhhHHHHHHHHHHHHHHHhCCCCCceEEEEEEcccccCccccHHHHHHHHHhcCCCCCEEEE
Confidence 4 3 36899999998 7999999999999988777789999999999999 44 699988764321 24677776
Q ss_pred eccCCCCCCceEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhccc-CCCCCCceEEEEEEe
Q 014490 197 LHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSRE-ADPLDSQVLTVAKFE 275 (423)
Q Consensus 197 ~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~-~~~~~~~t~~v~~i~ 275 (423)
.++....+.+... ..+.+|..+++++++|+++|++.|+.|.||+..+++++.+|+....+. ......++++++.++
T Consensus 162 ~e~~~~~~~g~~i---~~g~~g~~~~~i~~~G~~~Ha~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~v~~i~ 238 (377)
T 3isz_A 162 GEPSSAKNLGDVV---KNGRRGSITGNLYIQGIQGHVAYPHLAENPIHKAALFLQELTTYQWDKGNEFFPPTSLQIANIH 238 (377)
T ss_dssp CCCCBSSSTTSEE---EEEECEEEEEEEEEECC-------CGGGCHHHHHHHHHHHHHHCCCCCCCSSSCCCEEEEEEEE
T ss_pred cCCCCcccCCceE---EEEcceEEEEEEEEEccccccCCCccCcCHHHHHHHHHHHHHhccccccccccCCceeEEEEEE
Confidence 5543333333321 123468999999999999999999999999999999999998864332 122456899999999
Q ss_pred cCC-CCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCccccCHHHHHHHHHHHHHhc
Q 014490 276 GGG-AFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADML 354 (423)
Q Consensus 276 gg~-~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~ 354 (423)
||. +.|+||++|++.+|+|+++.++.+++.+++++++++ +++++++++. ....|...+++++++.+++++++.+
T Consensus 239 gg~~~~nvip~~~~~~~diR~~~~~~~~~i~~~i~~~~~~----~g~~~~i~~~-~~~~p~~~~~~~l~~~l~~a~~~~~ 313 (377)
T 3isz_A 239 AGTGSNNVIPAELYIQFNLRYCTEVTDEIIKQKVAEMLEK----HNLKYRIEWN-LSGKPFLTKPGKLLDSITSAIEETI 313 (377)
T ss_dssp ECCSCSSCCCSEEEEEEEEEECTTSCHHHHHHHHHHHHHH----TTCCEEEEEE-ECCCCEECCTTHHHHHHHHHHHHHH
T ss_pred CCCCCCcccCCceEEEEEEecCCCCCHHHHHHHHHHHHHH----cCCCeEEEEE-ecCCCCcCCCCHHHHHHHHHHHHHh
Confidence 997 899999999999999999999999999999888774 5777877763 1223333557789999999999977
Q ss_pred CCcccccCCCCCCCchHHHHHhh-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 355 GVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 355 g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
|.++. ....+|++|++++.+. +|++. +|+. + ..+|++||+++++++.+++++|+.++.
T Consensus 314 g~~~~--~~~~~g~tDa~~~~~~g~~~v~--~Gp~-----~-~~~H~~~E~i~~~~l~~~~~i~~~~i~ 372 (377)
T 3isz_A 314 GITPK--AETGGGTSDGRFIALMGAEVVE--FGPL-----N-STIHKVNECVSVEDLGKCGEIYHKMLV 372 (377)
T ss_dssp SCCCE--EEECSSCCSHHHHHTTTCEEEE--CCSB-----C-TTTTSTTCEEEHHHHHHHHHHHHHHHH
T ss_pred CCCCe--eeccCcccHHHHHHHcCCCEEE--ECCC-----C-CcccCCCCcEEHHHHHHHHHHHHHHHH
Confidence 98763 3466889999999887 66544 5633 2 359999999999999999999999885
No 10
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=100.00 E-value=2.3e-51 Score=416.44 Aligned_cols=374 Identities=13% Similarity=0.134 Sum_probs=299.0
Q ss_pred cccchHHHHhhcCchhHHHHHHHHHHhHhCCCC--CCC------cHHHHHHHHHHHHhCCCCeEecc--------c----
Q 014490 33 TQIPVKFLDFAKKPEIFYWMVNIRRKIHENPEL--GFQ------EFETSKLIRAELDQMGIPYKFPV--------A---- 92 (423)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ips~--s~~------E~~~~~~l~~~l~~~g~~~~~~~--------~---- 92 (423)
+...+++.++++.++ +++++++++|++|||+ |++ |.++++||.++|+++|++++... +
T Consensus 10 ~~~~~~i~~~i~~~~--~~~i~~l~~lv~ips~~~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~ 87 (485)
T 3dlj_A 10 PALLEKVFQYIDLHQ--DEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAADTLQRLGARVASVDMGPQQLPDGQSLP 87 (485)
T ss_dssp STTHHHHHHHHHHTH--HHHHHHHHHHHTSCCBSSSCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCEEEC--CCEEE
T ss_pred hHHHHHHHHHHHHhH--HHHHHHHHHHhcCCCccCCCCccccHHHHHHHHHHHHHHHHcCCeEEEEecCcccccCCCccC
Confidence 455678899999888 9999999999999999 887 57899999999999999887632 2
Q ss_pred -CceEEEEECCC-CCcEEEEEEecccccCcCCCCCc---ccC-CCCCccccCCc---hHHHHHHHHHHHHHHhccccCCc
Q 014490 93 -VTGVVGYIGTG-QPPFVALRADMDALAMEESVEWE---HKS-KVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKG 163 (423)
Q Consensus 93 -~~nvia~~~~~-~~~~ill~~H~Dtvp~~~~~~w~---~~~-~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~ 163 (423)
.+||+|+++++ ++|+|+|+|||||||+++.+.|. |.. +++|++||||+ |++++++|+|+++|++.+.++++
T Consensus 88 ~~~~v~a~~~~~~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~ 167 (485)
T 3dlj_A 88 IPPVILAELGSDPTKGTVCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRALEQDLPV 167 (485)
T ss_dssp CCCEEEEEECCCTTSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSS
T ss_pred CCcEEEEEECCCCCCCEEEEEeeecCCCCCCcccCCCCCCccEEECCEEEecccccCcHHHHHHHHHHHHHHHhCCCCCc
Confidence 35899999764 46999999999999998777785 443 47899999998 69999999999999998888999
Q ss_pred eEEEEEecCCC-CcccHHHHHhcCC---CcccceeeeeccCCCC-CCceEEeecCcccCcceEEEEEEEeCCC--CCCCC
Q 014490 164 TIVLVFQPAEE-GGGGAKKMLDAGA---LENVEAIFGLHVSSLF-PVGTVASRPGPTLAAGGFFEAVINGKGG--HAAIP 236 (423)
Q Consensus 164 ~i~~~~~~~EE-g~~Ga~~~~~~~~---~~~~d~~i~~~~~~~~-p~g~~~~~~g~~~~g~~~~~i~v~G~~~--Hs~~p 236 (423)
+|.|+|+++|| |+.|++.+++++. ++++|++++.|+.... ....+. ++++|..+|+|+|+|+++ |+|.
T Consensus 168 ~v~~~~~~~EE~g~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~----~g~~g~~~~~i~v~G~~~~~H~~~- 242 (485)
T 3dlj_A 168 NIKFIIEGMEEAGSVALEELVEKEKDRFFSGVDYIVISDNLWISQRKPAIT----YGTRGNSYFMVEVKCRDQDFHSGT- 242 (485)
T ss_dssp EEEEEEESCGGGTTTTHHHHHHHHTTTTSTTCCEEEECCCBCCC--CCEEE----EEECEEEEEEEEEESCSSCEETTT-
T ss_pred cEEEEEEcccccCCccHHHHHHhhhhhcccCCCEEEEcCCCccCCCCeeEE----EeccceEEEEEEEEECCCCCcCCC-
Confidence 99999999999 7789999998753 5578999887743211 112221 235699999999999999 9997
Q ss_pred CCCCcHHHHHHHHHHHHHHhhccc-----------CCCC----------------------------------------C
Q 014490 237 QHTIDPIVAASNVIVSLQHLVSRE-----------ADPL----------------------------------------D 265 (423)
Q Consensus 237 ~~g~nAi~~~~~~i~~l~~~~~~~-----------~~~~----------------------------------------~ 265 (423)
.|.||+..+..++..|+.+..+. .+++ .
T Consensus 243 -~g~~a~~~~~~l~~~l~~l~~~~g~i~ipg~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 321 (485)
T 3dlj_A 243 -FGGILHEPMADLVALLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRNSSRVEKFLFDTKEEILMHLWR 321 (485)
T ss_dssp -STTSSCCHHHHHHHHHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHHHTSCCCHHHHHHHHTCSCCSCSSHHHHHHHHHT
T ss_pred -CCccccCHHHHHHHHHHhhCCCCCCEeCCCcccccCCCCHHHHHHHHhCCCCHHHHHHhcCCCcccccchHHHHHHHhc
Confidence 35566666666666665554321 1111 1
Q ss_pred CceEEEEEEecC----CCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcC--CeEEEEeeccCCCCccccC
Q 014490 266 SQVLTVAKFEGG----GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQR--CNATVTFDDKSFYPVTVNN 339 (423)
Q Consensus 266 ~~t~~v~~i~gg----~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d 339 (423)
.++++|+.|+|| .+.|+||++|++.+++|+.+.++.+.+.++|+++++..+.+++ .++++++ ...++++.++
T Consensus 322 ~~~~~v~~i~gG~~gp~a~NVIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~~~~v~~--~~~~pp~~~~ 399 (485)
T 3dlj_A 322 YPSLSIHGIEGAFDEPGTKTVIPGRVIGKFSIRLVPHMNVSAVEKQVTRHLEDVFSKRNSSNKMVVSM--TLGLHPWIAN 399 (485)
T ss_dssp SCEEEEEEEESSCCSSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCCSSEEEEEE--EEEECCEECC
T ss_pred CCceEEEEEecCCcCCCCCceeCCeeEEEEEEEcCCCCCHHHHHHHHHHHHHHhccccCCCeeEEEEE--cCCCCceeCC
Confidence 578999999999 8999999999999999999999999999999999999999887 4788777 5567776554
Q ss_pred --HHHHHHHHHHHHHhcCCcccccCCCCCCCchH-HHHHhhcCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHH
Q 014490 340 --KNLHEHFQKVAADMLGVQNIKENRPLMGTEDF-SFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAAL 416 (423)
Q Consensus 340 --~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~-~~~~~~ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~ 416 (423)
+++++.+++++++.+|.++.. ...+|+.|+ .+|.+..|..++.+|.... ....|+|||++++++|..++++
T Consensus 400 ~d~~~~~~~~~a~~~~~G~~~~~--~~~ggs~Dfa~~~~~~~p~~~i~~g~g~~----~~~~H~p~E~i~~~~l~~g~~~ 473 (485)
T 3dlj_A 400 IDDTQYLAAKRAIRTVFGTEPDM--IRDGSTIPIAKMFQEIVHKSVVLIPLGAV----DDGEHSQNEKINRWNYIEGTKL 473 (485)
T ss_dssp TTSHHHHHHHHHHHHHHSSCCEE--EEESSCCHHHHHHHHHTC--CEECCCBCT----TCCTTSTTCEEEHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCcee--cCCCCchhHHHHHHHHhCCCEEEecCCCC----CCCCcCCCCCccHHHHHHHHHH
Confidence 589999999999988987643 246788996 5677767765565665431 1459999999999999999999
Q ss_pred HHHHHh
Q 014490 417 HASLAT 422 (423)
Q Consensus 417 ~~~~i~ 422 (423)
|+.++.
T Consensus 474 l~~~l~ 479 (485)
T 3dlj_A 474 FAAFFL 479 (485)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999875
No 11
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=100.00 E-value=1.6e-51 Score=403.84 Aligned_cols=344 Identities=17% Similarity=0.163 Sum_probs=277.5
Q ss_pred HHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCC-eEecccCceEEEEECCCCCcEEEEEEecccccCcCCCCCccc
Q 014490 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIP-YKFPVAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWEHK 128 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~-~~~~~~~~nvia~~~~~~~~~ill~~H~Dtvp~~~~~~w~~~ 128 (423)
+++++++++|+++||+|++|.++++||.++|+++|++ ++....++|++++++++++|+|+|+|||||||+++ .|++.
T Consensus 13 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~a~~~~~~~~~v~l~~H~D~vp~~~--~~~~~ 90 (369)
T 3tx8_A 13 GDPIVLTQRLVDIPSPSGQEKQIADEIEDALRNLNLPGVEVFRFNNNVLARTNRGLASRVMLAGHIDTVPIAD--NLPSR 90 (369)
T ss_dssp SCHHHHHHHHHSSCCBTTCTHHHHHHHHHHHHTTTCTTCEEEEETTEEEEECCCCCSCEEEEEEECCBSCCCS--CCSCE
T ss_pred HHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHhcCCCCcEEeccCCcEEEEecCCCCCeEEEEcccCccCCCC--CCCCe
Confidence 5689999999999999999999999999999999984 54444577999999766679999999999999886 45554
Q ss_pred CCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Cc--ccHHHHHhcCC-CcccceeeeeccCC
Q 014490 129 SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG--GGAKKMLDAGA-LENVEAIFGLHVSS 201 (423)
Q Consensus 129 ~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~--~Ga~~~~~~~~-~~~~d~~i~~~~~~ 201 (423)
. ++|++||||+ |++++++|+|+++|++. ..++++|.|+|+++|| |+ .|++.+++.+. .-++|+++. .++
T Consensus 91 ~-~~g~~~g~G~~D~K~~~a~~l~a~~~l~~~-~~~~~~v~~~~~~~EE~g~~~~G~~~~~~~~~~~~~~~~~i~--~ep 166 (369)
T 3tx8_A 91 V-EDGIMYGCGTVDMKSGLAVYLHTFATLATS-TELKHDLTLIAYECEEVADHLNGLGHIRDEHPEWLAADLALL--GEP 166 (369)
T ss_dssp E-CSSEEESSSTTTTHHHHHHHHHHHHHHTSC-TTCCSEEEEEEECCCSSCTTSCHHHHHHHHCGGGGCCSEEEE--CCC
T ss_pred E-ECCEEEcCCcccchHHHHHHHHHHHHHHhh-cCCCccEEEEEEeccccCcccccHHHHHHhcccccCCCEEEE--eCC
Confidence 3 5899999998 59999999999999874 3689999999999999 55 69999988752 113455544 333
Q ss_pred CCCCceEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhcccCC--CC-CCceEEEEEEecCC
Q 014490 202 LFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREAD--PL-DSQVLTVAKFEGGG 278 (423)
Q Consensus 202 ~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~--~~-~~~t~~v~~i~gg~ 278 (423)
+. +.+. .+++|..+++|+++|+++|+|.|+.|.||+..+++++.+|+++..+..+ +. ...+++++.|+||.
T Consensus 167 ~~--~~i~----~~~~G~~~~~i~v~G~~~Ha~~p~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~vg~i~gG~ 240 (369)
T 3tx8_A 167 TG--GWIE----AGCQGNLRIKVTAHGVRAHSARSWLGDNAMHKLSPIISKVAAYKAAEVNIDGLTYREGLNIVFCESGV 240 (369)
T ss_dssp CT--TCEE----ESBCEEEEEEEEEECBCCBTTSGGGSBCTGGGGHHHHHHHHHCCCCEEEETTEEEECEEEEEEEEECS
T ss_pred CC--Ccee----eecceEEEEEEEEeeeccccCCCCcCcCHHHHHHHHHHHHHhhcccccccCCcccCceEEEEEEECCC
Confidence 22 3332 3457999999999999999999999999999999999999987643221 11 24689999999999
Q ss_pred CCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCccccCHHHHHHHHHHHHHhcCC-c
Q 014490 279 AFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGV-Q 357 (423)
Q Consensus 279 ~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~g~-~ 357 (423)
+.|+||++|++.+|+|++|.++.+++.++|++++++.+ .++++++++.. ..++++ ..++++++.+.+++ |. +
T Consensus 241 ~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~-~~g~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~----g~~~ 313 (369)
T 3tx8_A 241 ANNVIPDLAWMNLNFRFAPNRDLNEAIEHVVETLELDG-QDGIEWAVEDG-AGGALP-GLGQQVTSGLIDAV----GREK 313 (369)
T ss_dssp BTTBCCSEEEEEEEEEECTTSCHHHHHHHHHHHTTTTT-STTEEEEEEEE-ECCBCC-CTTSHHHHHHHHHH----CGGG
T ss_pred CCccccCcEEEEEEEecCCCCCHHHHHHHHHHHHHhcc-cCCeEEEEEec-CCCCCC-CCCCHHHHHHHHHc----CCCC
Confidence 99999999999999999999999999999999998766 56777776432 344444 34556666665553 65 3
Q ss_pred ccccCCCCCCCchHHHHHhh-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHhC
Q 014490 358 NIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATS 423 (423)
Q Consensus 358 ~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~~ 423 (423)
+ ....|++|+++|.+. +|++. +| ||+...+|++||++++++|.+++++|+.++.+
T Consensus 314 ~----~~~~ggtD~~~~~~~giP~~~--~G-----pg~~~~~H~~~E~v~~~~l~~~~~~l~~~l~e 369 (369)
T 3tx8_A 314 I----RAKFGWTDVSRFSAMGIPALN--FG-----AGDPSFAHKRDEQCPVEQITDVAAILKQYLSE 369 (369)
T ss_dssp E----EECCSCCTHHHHHTTTCCEEE--EC-----SSCSSSSSCTTCEEEHHHHHHHHHHHHHHHHC
T ss_pred C----cccccccchHHHhhCCCCEEE--EC-----CCChhhCCCCCcEEEHHHHHHHHHHHHHHhhC
Confidence 3 246788999999988 99864 56 44456799999999999999999999999875
No 12
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=100.00 E-value=5.8e-51 Score=400.43 Aligned_cols=343 Identities=21% Similarity=0.242 Sum_probs=289.5
Q ss_pred HHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEecc-------cCceEEEEECCC--CCcEEEEEEecccccCc
Q 014490 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPV-------AVTGVVGYIGTG--QPPFVALRADMDALAME 120 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~~-------~~~nvia~~~~~--~~~~ill~~H~Dtvp~~ 120 (423)
+++++++++|+++||+|++|.++++||.++|+++|++++.+. .++|++++++++ ++|+|+|.||||+||.+
T Consensus 6 ~~~~~~l~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nv~a~~~g~~~~~~~v~l~aH~D~vp~~ 85 (373)
T 3gb0_A 6 ERLVNEFMELVQVDSETKFEAEICKVLTKKFTDLGVEVFEDDTMAVTGHGAGNLICTLPATKDGVDTIYFTSHMDTVVPG 85 (373)
T ss_dssp HHHHHHHHHHHTSCCBTTCCHHHHHHHHHHHHHTTCEEEECSCHHHHCCSSCCEEEEECCSSTTCCCEEEEEECCBCSSC
T ss_pred HHHHHHHHHHhcccCCCccHHHHHHHHHHHHHHCCCEEEEeccccccCCCceeEEEEecCCCCCCCEEEEEEECcccCCC
Confidence 779999999999999999999999999999999999987753 258999999654 46999999999999987
Q ss_pred CCCCCcccCCCCCccccCCc-------hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHhcCCCcccc
Q 014490 121 ESVEWEHKSKVPGKMHACGH-------DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVE 192 (423)
Q Consensus 121 ~~~~w~~~~~~~g~~~grG~-------k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~~~~~~~~~~d 192 (423)
+ .|+ +..++|++||||+ |++++++|+++++|++.+. ++++|.|+|+++|| |+.|++.+..++ .+
T Consensus 86 ~--~~~-p~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~-~~~~v~~~~~~~EE~g~~Ga~~~~~~~----~~ 157 (373)
T 3gb0_A 86 N--GIK-PSIKDGYIVSDGTTILGADDKAGLASMFEAIRVLKEKNI-PHGTIEFIITVGEESGLVGAKALDRER----IT 157 (373)
T ss_dssp S--SCC-CEEETTEEECCSSSCCCHHHHHHHHHHHHHHHHHHHTTC-CCCCEEEEEESCGGGTSHHHHHSCGGG----CC
T ss_pred C--CcC-cEEECCEEECCCccccCcccHHHHHHHHHHHHHHHhcCC-CCCCEEEEEEeccccCchhhhhhCHHh----cC
Confidence 5 453 3556799999996 5899999999999998774 78999999999999 778999985433 23
Q ss_pred eeeeeccCCCCCCceEEeecCcccCcceEEEEEEEeCCCCCC-CCCCCCcHHHHHHHHHHHHHHhhcccCCCCCCceEEE
Q 014490 193 AIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAA-IPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTV 271 (423)
Q Consensus 193 ~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~-~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v 271 (423)
..++++.+++.+.+.+... .+|..+++|+++|+++|++ .|+.|+||+..+++++.+|+.. ..+ ...++++
T Consensus 158 ~~~~~~~~~~~~~g~i~~~----~~g~~~~~i~~~G~~~Ha~~~p~~g~nai~~~~~~i~~l~~~---~~~--~~~~~~v 228 (373)
T 3gb0_A 158 AKYGYALDSDGKVGEIVVA----APTQAKVNAIIRGKTAHAGVAPEKGVSAITIAAKAIAKMPLG---RID--SETTANI 228 (373)
T ss_dssp CSEEEEEEECSCTTEEEEE----ECEEEEEEEEEECBCCBTTTCGGGSBCHHHHHHHHHTTSCCE---EEE--TTEEEEE
T ss_pred CCEEEEEcCCCCCCeEEEc----CCCcEEEEEEEEeEecCCCCChhhCcCHHHHHHHHHHhcccc---cCC--Cccccce
Confidence 3344444555556665443 3589999999999999999 7999999999999999988652 112 2478999
Q ss_pred EEEecCCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCcc--ccCHHHHHHHHHH
Q 014490 272 AKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVT--VNNKNLHEHFQKV 349 (423)
Q Consensus 272 ~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~~~~~~l~~~ 349 (423)
+.|+||.+.|+||++|++.+|+|+.+.++.+++.++|++++++.+..++++++++. ...+|++ ++|+++++.++++
T Consensus 229 g~i~gG~~~Nvip~~~~~~~d~R~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~i~~--~~~~~~~~~~~~~~l~~~~~~~ 306 (373)
T 3gb0_A 229 GRFEGGTQTNIVCDHVQIFAEARSLINEKMEAQVAKMKEAFETTAKEMGGHADVEV--NVMYPGFKFADGDHVVEVAKRA 306 (373)
T ss_dssp EEEEECSCTTBCCCEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCEEEEEE--EEEECCEECCTTCHHHHHHHHH
T ss_pred eEEecCcccccccceEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCeEEEEE--ecccCCcccCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988999998887 5566766 4578999999999
Q ss_pred HHHhcCCcccccCCCCCCCchHHHHHhh-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 350 AADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 350 ~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
+++. |.++ .....+|++|+++|.+. +|++++++|. ..+|++||++++++|.+++++|+.++.
T Consensus 307 ~~~~-g~~~--~~~~~~g~~D~~~~~~~gip~~~~g~~~--------~~~H~~~E~i~~~~l~~~~~~~~~~l~ 369 (373)
T 3gb0_A 307 AEKI-GRTP--SLHQSGGGSDANVIAGHGIPTVNLAVGY--------EEIHTTNEKIPVEELAKTAELVVAIIE 369 (373)
T ss_dssp HHHT-TCCC--EEEECSSCCHHHHHHHTTCCEEEEECCC--------BSTTSTTCEEEHHHHHHHHHHHHHHHH
T ss_pred HHHh-CCCc--eEecccCcchHHHHHhCCCCEEEecCCC--------CcCcCCceEEEHHHHHHHHHHHHHHHH
Confidence 9985 8765 33467899999999987 9988765542 259999999999999999999999885
No 13
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=100.00 E-value=5e-50 Score=393.11 Aligned_cols=335 Identities=15% Similarity=0.120 Sum_probs=271.6
Q ss_pred HHHHHHHHHhHhCCCCC--C---CcHHHHHHHHHHHHhCCCCeEecc---cCceEEEEECCCCCcEEEEEEecccccCcC
Q 014490 50 YWMVNIRRKIHENPELG--F---QEFETSKLIRAELDQMGIPYKFPV---AVTGVVGYIGTGQPPFVALRADMDALAMEE 121 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s--~---~E~~~~~~l~~~l~~~g~~~~~~~---~~~nvia~~~~~~~~~ill~~H~Dtvp~~~ 121 (423)
+++++++++|++|||+| + +|.++++||.++|+ |++++... .++|+++ ++++ |+|+|.+||||||.++
T Consensus 9 ~~~~~~l~~l~~ips~s~~~~~~~e~~~~~~l~~~l~--G~~~~~~~~~~~~~~~~a-~~g~--~~i~l~~H~D~vp~~~ 83 (369)
T 2f7v_A 9 ASTLEHLETLVSFDTRNPPRAIAAEGGIFDYLRAQLP--GFQVEVIDHGDGAVSLYA-VRGT--PKYLFNVHLDTVPDSP 83 (369)
T ss_dssp HHHHHHHHHHHHSCCBTTTTCCCSSSHHHHHHHTTCT--TCEEEEEECSTTCEEEEE-EESC--CSEEEEEECCBCCCCS
T ss_pred HHHHHHHHHHhCCCCcCCCCCCccHHHHHHHHHHHhC--CCceEEEEcCCCceEEEE-EcCC--CeEEEEeeecccCCCC
Confidence 78999999999999999 8 89999999999999 99877643 4689999 8644 8899999999999886
Q ss_pred CCCCc---cc-CCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCC--cccHHHHHhcCCCcccc
Q 014490 122 SVEWE---HK-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEG--GGGAKKMLDAGALENVE 192 (423)
Q Consensus 122 ~~~w~---~~-~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg--~~Ga~~~~~~~~~~~~d 192 (423)
.|. |. ..+||++||||+ |++++++|.+++. ++++|.|+|+++||. +.|++.+++++. ++|
T Consensus 84 --~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~-------~~~~v~~~~~~~EE~~g~~G~~~~~~~~~--~~d 152 (369)
T 2f7v_A 84 --HWSADPHVMRRTEDRVIGLGVCDIKGAAAALVAAANA-------GDGDAAFLFSSDEEANDPRCIAAFLARGL--PYD 152 (369)
T ss_dssp --SCSSCTTSCEECSSEEECTTTTTTHHHHHHHHHHHTT-------CCCCEEEEEESCTTSSSCCHHHHHHTTCC--CCS
T ss_pred --CCCCCCCCcEEECCEEEecccccccHHHHHHHHHHhc-------CCCCEEEEEEeCcccCCCcCHHHHHhcCC--CCC
Confidence 564 44 256899999998 8999999998875 678999999999994 489999998765 567
Q ss_pred eeeeeccCCCCCCceEEeecCcccCcceEEEEEEEeCCCCCCCCC-CCCcHHHHHHHHHHHHHHhhcccC----CCCCCc
Q 014490 193 AIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQ-HTIDPIVAASNVIVSLQHLVSREA----DPLDSQ 267 (423)
Q Consensus 193 ~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~-~g~nAi~~~~~~i~~l~~~~~~~~----~~~~~~ 267 (423)
++++.++ . .+. ...+++|..+++|+++|+++|+|.|+ .|.|||..+++++.+|+.+..+.. ++...+
T Consensus 153 ~~i~~e~--~--~~~----i~~~~~g~~~~~i~v~G~~~Ha~~p~~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~ 224 (369)
T 2f7v_A 153 AVLVAEP--T--MSE----AVLAHRGISSVLMRFAGRAGHASGKQDPAASALHQAMRWGGKALDHVESLAHARFGGLTGL 224 (369)
T ss_dssp EEEECCC--S--TTC----BBCCBCCEEEEEEEEECCCC------CTTSCHHHHHHHHHHHHHHHHHHTTTCEETTEESC
T ss_pred EEEECCC--C--CCc----ceeecCceEEEEEEEeeeCcccCCCCcCCCCHHHHHHHHHHHHHhhhhhhcccccCcccCC
Confidence 7776432 1 122 23556899999999999999999999 899999999999999988764331 221127
Q ss_pred eEEEEEEecCCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCccccC-HHHHHHH
Q 014490 268 VLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNN-KNLHEHF 346 (423)
Q Consensus 268 t~~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~l 346 (423)
+++++.|+||...|+||++|++.+|+|++|.++.+++.++|++++++. +++++++.. ...+|++..+ +++++.+
T Consensus 225 ~~~vg~i~gG~~~NviP~~a~~~~diR~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~l~~~~ 299 (369)
T 2f7v_A 225 RFNIGRVDGGIKANMIAPAAELRFGFRPLPSMDVDGLLATFAGFADPA----AAHFEETFR-GPSLPSGDIARAEERRLA 299 (369)
T ss_dssp EEEEEEEEECSSTTSCCSEEEEEEEEECCTTCCHHHHHHHHHHTCSSC----CSEEEEEEE-ECCBSCSSHHHHHHHHHH
T ss_pred ceEEEEeecCCCCCcCCCceEEEEEEeeCCCCCHHHHHHHHHHHHHHh----cCceEEEec-cCCCCccCCCCCHHHHHH
Confidence 999999999999999999999999999999999999999998887643 456666652 1356777666 8899999
Q ss_pred HHHHHHhcCCcccccCCCCCCCchHHHHHhh-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHhC
Q 014490 347 QKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATS 423 (423)
Q Consensus 347 ~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~~ 423 (423)
++++++.+|.++. ....|++|+++|.+. +|++ .+| ||+...+|++||++++++|.+++++|+.++.+
T Consensus 300 ~~a~~~~~g~~~~---~~~~g~~D~~~~~~~g~p~v--~~G-----pg~~~~~H~~~E~~~~~~l~~~~~~~~~~~~~ 367 (369)
T 2f7v_A 300 ARDVADALDLPIG---NAVDFWTEASLFSAGGYTAL--VYG-----PGDIAQAHTADEFVTLAQLQRYVESVNRIING 367 (369)
T ss_dssp HHHHHHHTTCCBC---CCBSSCCTHHHHHHTTCCEE--ECC-----SSCGGGTTCTTCEEEHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHhhCCCCC---ccccccCcHHHHhhCCCCEE--EEC-----CCCccccCCCCceEEHHHHHHHHHHHHHHHHh
Confidence 9999998887653 357899999999988 9976 456 44456799999999999999999999998864
No 14
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=100.00 E-value=9.5e-50 Score=404.47 Aligned_cols=368 Identities=15% Similarity=0.119 Sum_probs=297.8
Q ss_pred hHHHHhhcCchhHHHHHHHHHHhHhCCCCCCCc------HHHHHHHHHHHHhCCCCeEecc--------cC-----ceEE
Q 014490 37 VKFLDFAKKPEIFYWMVNIRRKIHENPELGFQE------FETSKLIRAELDQMGIPYKFPV--------AV-----TGVV 97 (423)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~E------~~~~~~l~~~l~~~g~~~~~~~--------~~-----~nvi 97 (423)
+++.++++..+ +++++++++|++|||+|++| .++++||.++|+++|++++.+. ++ +||+
T Consensus 9 ~~~~~~~~~~~--~~~~~~l~~l~~~ps~s~~e~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~v~ 86 (479)
T 2zog_A 9 KAVFQYIDENQ--DRYVKKLAEWVAIQSVSAWPEKRGEIRRMMEVAAADVQRLGGSVELVDIGKQKLPDGSEIPLPPILL 86 (479)
T ss_dssp HHHHHHHHHTH--HHHHHHHHHHHHSCCBTTCGGGHHHHHHHHHHHHHHHHHTTCEEEEECCCEEECTTSCEEECCCEEE
T ss_pred HHHHHHHHHhH--HHHHHHHHHHhcCCCccCCcccchHHHHHHHHHHHHHHHcCCeEEEeeccccccCCCcccCCCCEEE
Confidence 45777777766 89999999999999999987 7899999999999999887642 22 8999
Q ss_pred EEECCC-CCcEEEEEEecccccCcCCCCCccc---C-CCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEE
Q 014490 98 GYIGTG-QPPFVALRADMDALAMEESVEWEHK---S-KVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVF 169 (423)
Q Consensus 98 a~~~~~-~~~~ill~~H~Dtvp~~~~~~w~~~---~-~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~ 169 (423)
++++++ ++|+|+|+|||||||.++...|..+ . ++||++||||+ |++++++|+|+++|++.+.+++++|.|+|
T Consensus 87 a~~~~~~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grGa~D~K~g~a~~l~a~~~l~~~~~~~~~~v~~~~ 166 (479)
T 2zog_A 87 GKLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLVEREGKLYGRGSTDDKGPVAGWMNALEAYQKTGQEIPVNLRFCL 166 (479)
T ss_dssp EEECCCTTSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEE
T ss_pred EEecCCCCCCeEEEEEecCCCCCCccccCcCCCCcceeECCEEEeeccccChHHHHHHHHHHHHHHHhCCCCCCcEEEEE
Confidence 999754 3699999999999999876778543 2 46899999996 79999999999999998888899999999
Q ss_pred ecCCC-CcccHHHHHhcC---CCcccceeeeeccCCCCC-CceEEeecCcccCcceEEEEEEEeCC--CCCCCCCCCCcH
Q 014490 170 QPAEE-GGGGAKKMLDAG---ALENVEAIFGLHVSSLFP-VGTVASRPGPTLAAGGFFEAVINGKG--GHAAIPQHTIDP 242 (423)
Q Consensus 170 ~~~EE-g~~Ga~~~~~~~---~~~~~d~~i~~~~~~~~p-~g~~~~~~g~~~~g~~~~~i~v~G~~--~Hs~~p~~g~nA 242 (423)
+++|| |+.|++.+++++ .+.++|++++.++....+ .+.+. ++++|..+++|+++|++ +|||.+ |.||
T Consensus 167 ~~~EE~g~~Ga~~~~~~~~~~~~~~~d~~i~~e~~~~~~~~~~i~----~~~~G~~~~~i~v~G~~~~~Hs~~~--g~~a 240 (479)
T 2zog_A 167 EGMEESGSEGLDELIFAQKDKFFKDVDYVCISDNYWLGKNKPCIT----YGLRGICYFFIEVECSDKDLHSGVY--GGSV 240 (479)
T ss_dssp ESCGGGTCTTHHHHHHHTTTTTTTTCCEEEECCCBCSSSSSCEEE----EEECEEEEEEEEEECCSSCEEHHHH--TTTS
T ss_pred ecccccCCccHHHHHHhhhhhhcccCCEEEEeCCCcCCCCCeEEE----EecceEEEEEEEEEeCCCCCccCCC--CCCc
Confidence 99999 778999999875 444678888765422111 23332 34679999999999999 999985 7899
Q ss_pred HHHHHHHHHHHHHhhcccC-----------C-------------CC---------------------------CCceEEE
Q 014490 243 IVAASNVIVSLQHLVSREA-----------D-------------PL---------------------------DSQVLTV 271 (423)
Q Consensus 243 i~~~~~~i~~l~~~~~~~~-----------~-------------~~---------------------------~~~t~~v 271 (423)
+..+++++..|+++..+.. . +. ..+++++
T Consensus 241 i~~~~~~i~~l~~l~~~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v 320 (479)
T 2zog_A 241 HEAMTDLISLMGCLVDKKGKILIPGINDAVAPVTDEEHALYDHIDFDMEEFAKDVGAETLLHSCKKDILMHRWRYPSLSL 320 (479)
T ss_dssp CCHHHHHHHHHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHTSSCCCCHHHHHHHHTCSSCSCSSHHHHHHHHHTSCEEEE
T ss_pred cCHHHHHHHHHHhcCCCCCCEecCchhccCCCCCHHHHHHHHhCCCCHHHHHHhcCCccccccchHHHHHHhhcCCCeEE
Confidence 9999999998877643210 0 00 1478999
Q ss_pred EEEecC----CCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhc--CCeEEEEeeccCCCCcc--ccCHHHH
Q 014490 272 AKFEGG----GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQ--RCNATVTFDDKSFYPVT--VNNKNLH 343 (423)
Q Consensus 272 ~~i~gg----~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~--~~d~~~~ 343 (423)
+.|+|| .+.|+||++|++.+++|+.|+++.+++.++|++++++.+.++ +..++++. ...+|++ +.|++++
T Consensus 321 ~~i~gg~~g~~~~NvIP~~a~~~~~~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~d~~~~ 398 (479)
T 2zog_A 321 HGIEGAFSGSGAKTVIPRKVVGKFSIRLVPDMIPEVVSEQVSSYLSKKFAELQSPNKFKVYM--GHGGKPWVSDFNHPHY 398 (479)
T ss_dssp EEEESSCCSSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCCCSEEEEEE--EEEECCEECCTTSHHH
T ss_pred eeeecCCcCCCCccccCCceEEEEEEEeCCCCCHHHHHHHHHHHHHHhhhccCCCceEEEEe--cCCCCceecCCCCHHH
Confidence 999998 789999999999999999999999999999999999887765 56677666 3455664 3478899
Q ss_pred HHHHHHHHHhcCCcccccCCCCCCCchH-HHHHhh--cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHH
Q 014490 344 EHFQKVAADMLGVQNIKENRPLMGTEDF-SFFAEA--IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASL 420 (423)
Q Consensus 344 ~~l~~~~~~~~g~~~~~~~~~~~g~tD~-~~~~~~--ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~ 420 (423)
+.+++++++.+|.++.. ...+|++|+ ++|.+. +|++++++|+ ++ ..+|++||++++++|.+++++|+.+
T Consensus 399 ~~~~~a~~~~~g~~~~~--~~~~gs~d~~~~~~~~~~~p~~~~g~g~-----~~-~~~H~~~E~i~~~~l~~~~~~~~~~ 470 (479)
T 2zog_A 399 QAGRRALKTVFGVEPDL--TREGGSIPVTLTFQEATGKNVMLLPVGS-----AD-DGAHSQNEKLNRLNYIEGTKMLAAY 470 (479)
T ss_dssp HHHHHHHHHHHSSCCEE--EEESSCCTHHHHHHHHHCSEEEECCCBC-----TT-CCTTSTTCEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcee--cCCCCccchHHHHHHHhCCCEEEecCCC-----Cc-cCCCCCCCcEeHHHHHHHHHHHHHH
Confidence 99999999988887643 245789997 577764 8877766673 33 3699999999999999999999998
Q ss_pred Hh
Q 014490 421 AT 422 (423)
Q Consensus 421 i~ 422 (423)
+.
T Consensus 471 ~~ 472 (479)
T 2zog_A 471 LY 472 (479)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 15
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=100.00 E-value=1.2e-49 Score=403.67 Aligned_cols=370 Identities=13% Similarity=0.081 Sum_probs=293.9
Q ss_pred chHHHHhhcCchhHH-HHHHHHHHhHhCCCCCCCc---HHHHHHHHHHHHhCCCCeEec--ccCceEEEEECCC--CCcE
Q 014490 36 PVKFLDFAKKPEIFY-WMVNIRRKIHENPELGFQE---FETSKLIRAELDQMGIPYKFP--VAVTGVVGYIGTG--QPPF 107 (423)
Q Consensus 36 ~~~~~~~~~~~~~~~-~~~~~~~~l~~ips~s~~E---~~~~~~l~~~l~~~g~~~~~~--~~~~nvia~~~~~--~~~~ 107 (423)
.+++.++++.++ + ++++++++|++|||+|++| .++++||.++|+++|++++.. ..++||+++++++ ++|+
T Consensus 31 m~~~~~~~~~~~--~~~~~~~l~~l~~ips~s~~e~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~v~a~~~g~~~~~~~ 108 (481)
T 2pok_A 31 QEQIEKFEKDHV--AQHYFEVLRTLISKKSVFAQQVGLKEVANYLGEIFKRVGAEVEIDESYTAPFVMAHFKSSRPDAKT 108 (481)
T ss_dssp HHHHHHHHHCHH--HHHHHHHHHHHHHSCCCGGGCTTHHHHHHHHHHHHHHTTCEEEEECSSSSCEEEEEECCSSTTCCE
T ss_pred HHHHHHHHHhhh--hHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHHHHHHHcCCEEEEecCCCCcEEEEEecCCCCCCCe
Confidence 357888888877 8 9999999999999999876 899999999999999988764 3478999999643 4599
Q ss_pred EEEEEecccccCcCCCCCc---ccC-CCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccH
Q 014490 108 VALRADMDALAMEESVEWE---HKS-KVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGA 179 (423)
Q Consensus 108 ill~~H~Dtvp~~~~~~w~---~~~-~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga 179 (423)
|+|.|||||||.++.+.|. |.. ++||++||||+ |++++++|+|+++|++.+..++++|.|+|+++|| |+.|+
T Consensus 109 i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~g~ 188 (481)
T 2pok_A 109 LIFYNHYDTVPADGDQVWTEDPFTLSVRNGFMYGRGVDDDKGHITARLSALRKYMQHHDDLPVNISFIMEGAEESASTDL 188 (481)
T ss_dssp EEEEEECCCCCSCSSCCCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTCSSCSSEEEEEEESCGGGTTTTH
T ss_pred EEEEEeccCcCCCCccccccCCCCceeeCCeEEccccccCcHHHHHHHHHHHHHHHhcCCCCCCEEEEEecccccCchhH
Confidence 9999999999998877894 442 56899999997 8999999999999998755789999999999999 77899
Q ss_pred HHHHhcCC--CcccceeeeeccCCCCCC-ceEEeecCcccCcceEEEEEEEeCC--CCCCCCCCCCcHHHHHHHHHHHHH
Q 014490 180 KKMLDAGA--LENVEAIFGLHVSSLFPV-GTVASRPGPTLAAGGFFEAVINGKG--GHAAIPQHTIDPIVAASNVIVSLQ 254 (423)
Q Consensus 180 ~~~~~~~~--~~~~d~~i~~~~~~~~p~-g~~~~~~g~~~~g~~~~~i~v~G~~--~Hs~~p~~g~nAi~~~~~~i~~l~ 254 (423)
+.+++++. ++++|++++.++ +.+. +.. ...++++|..+++|+++|++ +||+.|+.|.|||..+++++.+|+
T Consensus 189 ~~~~~~~~~~~~~~d~~i~~~~--~~~~~~~~--~i~~~~~G~~~~~i~v~G~~g~~Hss~p~~g~nAi~~~a~~i~~l~ 264 (481)
T 2pok_A 189 DKYLEKHADKLRGADLLVWEQG--TKNALEQL--EISGGNKGIVTFDAKVKSADVDIHSSYGGVVESAPWYLLQALQSLR 264 (481)
T ss_dssp HHHHHHHHHHHTTCSEEECSCC--BBCTTSCE--EEECCBCEEEEEEEEEECSSSCEEGGGTTTBCCHHHHHHHHHHHTB
T ss_pred HHHHHHhHhhccCCCEEEECCC--CccCCCCe--eEEEecceeEEEEEEEecCCCCccccCCCCCCCHHHHHHHHHHHhh
Confidence 98887642 333677776432 2221 212 22346789999999999999 899999999999999999999987
Q ss_pred Hhh-----------------------ccc--------------CCC-------------CCCceEEEEEEecCC----CC
Q 014490 255 HLV-----------------------SRE--------------ADP-------------LDSQVLTVAKFEGGG----AF 280 (423)
Q Consensus 255 ~~~-----------------------~~~--------------~~~-------------~~~~t~~v~~i~gg~----~~ 280 (423)
.+. .+. .++ ...+++|++.|+||. +.
T Consensus 265 ~~~~~i~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~t~~vg~i~gG~~~~~~~ 344 (481)
T 2pok_A 265 AADGRILVEGLYEEVQEPNEREMALLETYGQRNPEEVSRIYGLELPLLQEERMAFLKRFFFDPALNIEGIQSGYQGQGVK 344 (481)
T ss_dssp CTTSCBCCTTTGGGSCCCCHHHHHHHHHHSCSCGGGHHHHHTCCSCCSSCSHHHHHHHHHHSCEEEEEEEEEECCSSSCC
T ss_pred CCCCceeccchhhcCCCCCHHHHHHHHhcCcccHHHHHHhhCcccccccccchhHHHHHhhcCeEeEEeeecCCCCCCCC
Confidence 642 000 000 024799999999985 78
Q ss_pred ccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCcc--ccCHHHHHHHHHHHHHhcCCcc
Q 014490 281 NIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVT--VNNKNLHEHFQKVAADMLGVQN 358 (423)
Q Consensus 281 n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~~~~~~l~~~~~~~~g~~~ 358 (423)
|+||++|++.+|+|++|.++.+.+.++|+++++..+. .++++++.. .+|++ +.|+++++.+++++++.+|.++
T Consensus 345 NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~-~~~~v~~~~----~~p~~~~~~d~~l~~~~~~a~~~~~g~~~ 419 (481)
T 2pok_A 345 TILPAEASAKLEVRLVPGLEPHDVLEKIRKQLDKNGF-DKVELYYTL----GEMSYRSDMSAPAILNVIELAKKFYPQGV 419 (481)
T ss_dssp CEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHTTC-TTEEEEEEE----EECCBCCCSCSHHHHHHHHHHTTTCTTCE
T ss_pred eeccCeeEEEEEEEeCCCCCHHHHHHHHHHHHHhhCC-CceEEEEcc----CCCcccCCCCCHHHHHHHHHHHHHcCCCc
Confidence 9999999999999999999999999999999987654 455555432 33443 4578999999999999888766
Q ss_pred cccCCCCCCCchHHHHHhh--cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHhC
Q 014490 359 IKENRPLMGTEDFSFFAEA--IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATS 423 (423)
Q Consensus 359 ~~~~~~~~g~tD~~~~~~~--ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~~ 423 (423)
+.. ...+|++|+++|.+. +|++. +|+.. | ...+|++||++++++|.+++++|+.++.+
T Consensus 420 ~~~-~~~gg~~D~~~~~~~~g~p~v~--~G~g~--~--~~~~H~~~E~i~i~~l~~~~~~~~~~l~~ 479 (481)
T 2pok_A 420 SVL-PTTAGTGPMHTVFDALEVPMVA--FGLGN--A--NSRDHGGDENVRIADYYTHIELVEELIRS 479 (481)
T ss_dssp EEE-SCBSSCCTHHHHHHHHCCCEEB--CCSBC--T--TCCTTSTTCEEEHHHHHHHHHHHHHHHHT
T ss_pred ccc-ccCCCCCchHHHHHHcCCCEEE--ecCCC--c--ccCCCCCCCcEEHHHHHHHHHHHHHHHHh
Confidence 322 244555599999775 88754 45322 1 25699999999999999999999998863
No 16
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=100.00 E-value=2.3e-49 Score=400.35 Aligned_cols=368 Identities=12% Similarity=0.034 Sum_probs=286.1
Q ss_pred HHHHhhcCchhHHHHHHHHHHhHhCCCCCCC----------cHHHHHHHHHHHHhCCCC---eEe---cccCceEEEEEC
Q 014490 38 KFLDFAKKPEIFYWMVNIRRKIHENPELGFQ----------EFETSKLIRAELDQMGIP---YKF---PVAVTGVVGYIG 101 (423)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~----------E~~~~~~l~~~l~~~g~~---~~~---~~~~~nvia~~~ 101 (423)
++.++++.++ .+++++++++|++|||+|++ |.++++||.++|+++|++ ++. ...++||+|+++
T Consensus 7 ~~~~~~~~~~-~~~~~~~l~~lv~ips~s~~~~~~~~~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~~~~~v~a~~~ 85 (472)
T 3pfe_A 7 GLYDYICQQW-QEEILPSLCDYIKIPNKSPHFDAKWEEHGYMEQAVNHIANWCKSHAPKGMTLEIVRLKNRTPLLFMEIP 85 (472)
T ss_dssp HHHHHHHHHH-HHTHHHHHHHHHTCCCBCGGGCTTHHHHCHHHHHHHHHHHHHHHTCCTTCEEEEECCTTSCCEEEEEEC
T ss_pred HHHHHHHHhh-HHHHHHHHHHHhCCCCcCCCccccccccchHHHHHHHHHHHHHHcCCCCcceEEEecCCCCcEEEEEEc
Confidence 5666666541 15689999999999999965 889999999999999995 432 223689999997
Q ss_pred CCCCcEEEEEEecccccCcCCCCCc-----ccC-CCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecC
Q 014490 102 TGQPPFVALRADMDALAMEESVEWE-----HKS-KVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPA 172 (423)
Q Consensus 102 ~~~~~~ill~~H~Dtvp~~~~~~w~-----~~~-~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~ 172 (423)
++++|+|+|+|||||||++ +.|. |.. ++||++||||+ |++++++|+|+++|++.+..++ +|.|+|+++
T Consensus 86 g~~~~~i~l~~H~D~vp~~--~~w~~~~~Pf~~~~~~g~~~grG~~D~K~~~a~~l~a~~~l~~~~~~~~-~v~~~~~~~ 162 (472)
T 3pfe_A 86 GQIDDTVLLYGHLDKQPEM--SGWSDDLHPWKPVLKNGLLYGRGGADDGYSAYASLTAIRALEQQGLPYP-RCILIIEAC 162 (472)
T ss_dssp CSEEEEEEEEEECCBCCCC--SCCCTTCBTTBCEEETTEEESTTCCCCCHHHHHHHHHHHHHHHTTCCCE-EEEEEEESC
T ss_pred CCCCCeEEEEccccCCCCc--CCCCcCCCCCceEEECCEEEEeCcccCcHHHHHHHHHHHHHHHcCCCCC-cEEEEEEeC
Confidence 6546999999999999986 4675 433 57899999998 6999999999999999886666 999999999
Q ss_pred CC-CcccHHHHHhcC--CCcccceeeeeccCCCCCCceEEeecCcccCcceEEEE--EEEeCCCCCCCCCCC-CcHHHHH
Q 014490 173 EE-GGGGAKKMLDAG--ALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEA--VINGKGGHAAIPQHT-IDPIVAA 246 (423)
Q Consensus 173 EE-g~~Ga~~~~~~~--~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i--~v~G~~~Hs~~p~~g-~nAi~~~ 246 (423)
|| |+.|++.+++++ .++++|++++.|.....+ +.... .++++|..++++ +++|+++|+|.|+.+ .|||..+
T Consensus 163 EE~g~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~i--~~g~~G~~~~~~~v~~~G~~~H~~~~~~~~~nai~~~ 239 (472)
T 3pfe_A 163 EESGSYDLPFYIELLKERIGKPSLVICLDSGAGNY-EQLWM--TTSLRGNLVGKLTVELINEGVHSGSASGIVADSFRVA 239 (472)
T ss_dssp GGGTSTTHHHHHHHHHHHHCCCSEEEEECCBCSCS-SSCEE--EEEECEEEEEEEEEESCSSCBCHHHHTTTSCCHHHHH
T ss_pred CCCCChhHHHHHHHhHhhccCCCEEEEeCCCcCCC-CCeeE--EEeeeEEEEEEEEEEeCCCCcccCCCCCCCCCHHHHH
Confidence 99 778999999875 334688999887532111 11111 123467777774 458999999987754 5999999
Q ss_pred HHHHHHHHHhh-ccc--------C-----------------------------CCCC------------CceEEEEEEec
Q 014490 247 SNVIVSLQHLV-SRE--------A-----------------------------DPLD------------SQVLTVAKFEG 276 (423)
Q Consensus 247 ~~~i~~l~~~~-~~~--------~-----------------------------~~~~------------~~t~~v~~i~g 276 (423)
+++|.+|+++. .+. . +++. .++++|+.|+|
T Consensus 240 ~~~i~~l~~~~~~~i~i~gf~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tl~i~~i~g 319 (472)
T 3pfe_A 240 RQLISRIEDENTGEIKLPQLYCDIPDERIKQAKQCAEILGEQVYSEFPWIDSAKPVIQDKQQLILNRTWRPALTVTGADG 319 (472)
T ss_dssp HHHHHHHBCTTTCCBCCGGGCCCCCHHHHHHHHHHHHHHGGGGTTTSCCCTTCCCSCSCHHHHHHHHHTSCEEEEEEEES
T ss_pred HHHHHHhhCcCCCCEeCCCcccCCCCccHHHHHHHhhhccHHHHHhcccccCccccccchHHHHHHhhcCCcEEEeeeec
Confidence 99999998873 100 0 0110 57999999998
Q ss_pred C----CCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccC-CCCcccc---CHHHHHHHHH
Q 014490 277 G----GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKS-FYPVTVN---NKNLHEHFQK 348 (423)
Q Consensus 277 g----~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---d~~~~~~l~~ 348 (423)
| .+.|+||++|++.+|+|+.+.++.+.+.++|++++++.+ .++++++++. .. .+|++.. ++.+++.+++
T Consensus 320 G~~~g~a~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~-~~g~~v~v~~--~~~~~pp~~~~~n~~~l~~~~~~ 396 (472)
T 3pfe_A 320 FPAIADAGNVMRPVTSLKLSMRLPPLVDPEAASVAMEKALTQNP-PYNAKVDFKI--QNGGSKGWNAPLLSDWLAKAASE 396 (472)
T ss_dssp CCCTTTCCSCBCSEEEEEEEEEECTTCCHHHHHHHHHHHHHSSC-GGGCEEEEEE--CSCCBCCEECCCCCHHHHHHHHH
T ss_pred CcCCCCCCCEeCCccEEEEEeecCCCCCHHHHHHHHHHHHHhhC-CCCeEEEEEe--cCCCCCcccCCCCChHHHHHHHH
Confidence 7 689999999999999999999999999999999998765 5688888877 55 6777653 3458899999
Q ss_pred HHHHhcCCcccccCCCCCCCch-H-HHHHhhcCeE-EEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 349 VAADMLGVQNIKENRPLMGTED-F-SFFAEAIPGY-FYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 349 ~~~~~~g~~~~~~~~~~~g~tD-~-~~~~~~ip~~-~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
++++++|.++.. ...|++| + ++|.+.+|.+ ++.+|+.. |+ ...|+|||++++++|.+++++|+.++.
T Consensus 397 a~~~~~G~~~~~---~~~gg~d~f~~~~~~~~Pg~p~v~~G~g~--~~--~~~H~p~E~i~~~~l~~g~~~l~~~l~ 466 (472)
T 3pfe_A 397 ASMTYYDKPAAY---MGEGGTIPFMSMLGEQFPKAQFMITGVLG--PH--SNAHGPNEFLHLDMVKKLTSCVSYVLY 466 (472)
T ss_dssp HHHHHHSSCCEE---EEESSCCHHHHHHHHHCTTCEEEEECCBC--TT--CCTTSTTCEEEHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCcee---ccCCCchhhHHHHHHHcCCCCEEEecCCC--CC--CCCcCCCcceeHHHHHHHHHHHHHHHH
Confidence 999988986642 2345666 4 6677767755 55667543 21 469999999999999999999999875
No 17
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=1.6e-49 Score=387.45 Aligned_cols=329 Identities=15% Similarity=0.122 Sum_probs=265.9
Q ss_pred HHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEecccCceEEEEECC-C-CCcEEEEEEecccccCcCCCCCc-
Q 014490 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGT-G-QPPFVALRADMDALAMEESVEWE- 126 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~-~-~~~~ill~~H~Dtvp~~~~~~w~- 126 (423)
+++++++++|++|||+|++|.++++||.++|+++|++++.+ ++|+++++++ + ++|+|+|.+||||||.++ .|.
T Consensus 11 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~g~~~~~~--~~nv~a~~~g~~~~~~~i~l~aH~D~vp~~~--~w~~ 86 (356)
T 3ct9_A 11 AEAVSLLKSLISIPSISREETQAADFLQNYIEAEGMQTGRK--GNNVWCLSPMFDLKKPTILLNSHIDTVKPVN--GWRK 86 (356)
T ss_dssp HHHHHHHHHHHTSCCBTTCCHHHHHHHHHHHHHTTCCEEEE--TTEEEEECSSCCTTSCEEEEEEECCBCCCC-------
T ss_pred HHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHCCCeEEEE--eeeEEEEEecCCCCCCeEEEEccccccCCCC--CCCC
Confidence 78999999999999999999999999999999999998765 8899999965 3 369999999999999876 574
Q ss_pred --ccC-CCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCC--cccHHHHHhcCCCcccceeeeec
Q 014490 127 --HKS-KVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEG--GGGAKKMLDAGALENVEAIFGLH 198 (423)
Q Consensus 127 --~~~-~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg--~~Ga~~~~~~~~~~~~d~~i~~~ 198 (423)
|.. .+||++||||+ |++++++|+|+++|++.+ ++++|.|+|+++||. +.|++.+++++ .++|+++..+
T Consensus 87 ~p~~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~--~~~~v~~~~~~~EE~~g~~G~~~~~~~~--~~~d~~i~~e 162 (356)
T 3ct9_A 87 DPFTPREENGKLYGLGSNDAGASVVSLLQVFLQLCRTS--QNYNLIYLASCEEEVSGKEGIESVLPGL--PPVSFAIVGE 162 (356)
T ss_dssp --CCCEECSSEEESTTTTTTHHHHHHHHHHHHHHTTSC--CSSEEEEEEECCGGGTCTTTHHHHGGGS--CCCSEEEECC
T ss_pred CCCccEEECCEEEecCcccchHHHHHHHHHHHHHHhcC--CCCCEEEEEEeCcccCCccCHHHHHhhC--CCCCEEEEcC
Confidence 443 45899999998 689999999999999876 889999999999994 48999998876 2566666543
Q ss_pred cCCCCCCceEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhcccCCC-CCCceEEEEEEecC
Q 014490 199 VSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADP-LDSQVLTVAKFEGG 277 (423)
Q Consensus 199 ~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~-~~~~t~~v~~i~gg 277 (423)
+.. +.+ ...++|..+++|+++|+++|++.| .|.|||..+++++.+|+.+..+..++ .+.++++++.|+||
T Consensus 163 --p~~--~~i----~~~~~G~~~~~i~~~G~~~Ha~~p-~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~vg~i~gG 233 (356)
T 3ct9_A 163 --PTE--MQP----AIAEKGLMVLDVTATGKAGHAARD-EGDNAIYKVLNDIAWFRDYRFEKESPLLGPVKMSVTVINAG 233 (356)
T ss_dssp --SBT--TCC----EEEECCCEEEEEEEECBCCBTTSS-CCBCTTGGGHHHHHHHHHCCCSCCBTTTBSCEEEEEEEEEC
T ss_pred --CCC--ceE----EEeeeEEEEEEEEEECCCcccCCC-CCCCHHHHHHHHHHHHHhhhcccccccCCCCcEEeeEEecC
Confidence 211 222 233568999999999999999999 99999999999999999876544333 35689999999999
Q ss_pred CCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCcc--ccCHHHHHHHHHHHHHhcC
Q 014490 278 GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVT--VNNKNLHEHFQKVAADMLG 355 (423)
Q Consensus 278 ~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~~~~~~l~~~~~~~~g 355 (423)
...|+||++|++.+|+|+++.++.+++.++|+++++. +++++. ..++++ +.|+++++.+++++++
T Consensus 234 ~~~NviP~~a~~~~~iR~~~~~~~~~~~~~i~~~~~~-------~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~--- 300 (356)
T 3ct9_A 234 TQHNVVPDKCTFVVDIRSNELYSNEDLFAEIRKHIAC-------DAKARS---FRLNSSRIDEKHPFVQKAVKMGRI--- 300 (356)
T ss_dssp SSTTBCCSEEEEEEEEECCTTCCHHHHHHHHHHHCCS-------EEEESC---SCSCCEECCTTSHHHHHHHHTTCC---
T ss_pred CcCCcCCCceEEEEEEeeCCCCCHHHHHHHHHHHhhC-------eEEEee---ccCCCCCCCCCCHHHHHHHHHhcC---
Confidence 9999999999999999999999999999999888753 333321 345554 3567888877666532
Q ss_pred CcccccCCCCCCCchHHHHHhhcCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHhC
Q 014490 356 VQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATS 423 (423)
Q Consensus 356 ~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~~ 423 (423)
+ ...+|++|++. ..+|++ .+| ||+...+|++||++++++|.+++++|+.++.+
T Consensus 301 --~----~~~~g~tD~~~--~~~p~v--~~G-----~g~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~ 353 (356)
T 3ct9_A 301 --P----FGSPTLSDQAL--MSFASV--KIG-----PGRSSRSHTAEEYIMLKEIEEAIGIYLDLLDG 353 (356)
T ss_dssp --C----EEECSCCGGGG--CCSCEE--ECC-----SSBGGGTTSTTCEEEHHHHHHHHHHHHHHHTT
T ss_pred --C----cccccccchhh--cCCCEE--EEC-----CCccccCcCCCcEEEHHHHHHHHHHHHHHHHH
Confidence 2 24678999993 248875 356 44445699999999999999999999998863
No 18
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=100.00 E-value=6.5e-48 Score=385.94 Aligned_cols=342 Identities=15% Similarity=0.118 Sum_probs=275.5
Q ss_pred HHHHHHHHHhHhCCCCCC----------CcHHHHHHHHHHHHhCCCC-eEecccCceEEEEECCC---CCcEEEEEEecc
Q 014490 50 YWMVNIRRKIHENPELGF----------QEFETSKLIRAELDQMGIP-YKFPVAVTGVVGYIGTG---QPPFVALRADMD 115 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~----------~E~~~~~~l~~~l~~~g~~-~~~~~~~~nvia~~~~~---~~~~ill~~H~D 115 (423)
+++++++++|++|||+|+ +|.++++||.++|+++|++ ++. +..+||++++++. ++|+|+|+||+|
T Consensus 27 ~~~~~~l~~lv~i~s~s~~~~~~~~~~~~e~~~~~~l~~~l~~~G~~~~~~-d~~~nv~a~~~g~~~~~~~~v~l~~H~D 105 (434)
T 3ife_A 27 EELIERFTRYVKIDTQSNEDSHTVPTTPGQIEFGKLLVEELKEVGLTEVTM-DDNGYVMATLPANTDKDVPVIGFLAHLD 105 (434)
T ss_dssp HHHHHHHHHHHTSCCBCCTTCCSSSSSHHHHHHHHHHHHHHHHHTCEEEEE-CTTSCEEEEECCBSSSCCCCEEEEEECC
T ss_pred HHHHHHHHhhEEeeccCCCccCCCCCCHHHHHHHHHHHHHHHHcCCceEEE-CCCcEEEEEeCCCCCCCCCeEEEEEEcc
Confidence 789999999999999998 4689999999999999997 665 4578999999654 258999999999
Q ss_pred cccCcCCCCCcccC----CC----------------------------CCccccCCc-------hHHHHHHHHHHHHHHh
Q 014490 116 ALAMEESVEWEHKS----KV----------------------------PGKMHACGH-------DAHVAMLLGAAKMLQV 156 (423)
Q Consensus 116 tvp~~~~~~w~~~~----~~----------------------------~g~~~grG~-------k~~~a~~l~a~~~l~~ 156 (423)
|||..+ .|+++. .. +|+|||||+ |++++++|+|+++|++
T Consensus 106 tVp~~~--~~~~~p~~~~~~dg~~i~l~~~~~~~~~~~~~~~~~~~~g~~~i~grG~t~~~~D~K~gva~~l~a~~~L~~ 183 (434)
T 3ife_A 106 TATDFT--GKNVKPQIHENFDGNAITLNEELNIVLTPEQFPELPSYKGHTIITTDGTTLLGADDKAGLTEIMVAMNYLIH 183 (434)
T ss_dssp BCTTSC--CSSCCCEEETTCCSSCEEEETTTTEEECTTTCTTGGGGTTSCEEECCSSSCCCHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCC--CCCCccEEeecCCCCceecccccccccChhhChhHHhhcCCcEEECCCccchhhhhHHHHHHHHHHHHHHHh
Confidence 999743 675541 11 258999995 8999999999999999
Q ss_pred ccccCCceEEEEEecCCCCcccHHHHHhcCCCcccceeeeeccCCCCCCceEEeecCcccCcceEEEEEEEeCCCCCC-C
Q 014490 157 FRHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAA-I 235 (423)
Q Consensus 157 ~~~~~~~~i~~~~~~~EEg~~Ga~~~~~~~~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~-~ 235 (423)
.+..++++|.|+|+++||++.|++.+.... + ++|+++++++ .+.|.+.+ +.+|..+++|+++|+++||| .
T Consensus 184 ~~~~~~~~i~~if~~~EE~g~Ga~~~~~~~-~-~~d~~~~~d~---~~~g~i~~----~~~G~~~~~i~v~G~~~Hag~~ 254 (434)
T 3ife_A 184 NPQIKHGKIRVAFTPDEEIGRGPAHFDVEA-F-GASFAYMMDG---GPLGGLEY----ESFNAAGAKLTFNGTNTHPGTA 254 (434)
T ss_dssp CTTSCBCCEEEEEESCGGGTCTGGGCCHHH-H-CCSEEEECCC---CSTTEEEC----CBCEEEEEEEEEECBCCCGGGC
T ss_pred CCCCCCCCEEEEEECCcccChHHHHhhhhh-c-CCCEEEEecC---CCCCceee----cCCCeEEEEEEEEEEecCCCCC
Confidence 887889999999999999448998874332 2 4788888763 24455543 35799999999999999998 7
Q ss_pred CCCCCcHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEecCCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHH
Q 014490 236 PQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQ 315 (423)
Q Consensus 236 p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~ 315 (423)
|+.|+|||..+++++.+|+.+.... ..+.+++.+++| ..|+||++|++.+|+|++|.++.+++.++|++++++.
T Consensus 255 P~~g~nAi~~aa~~i~~l~~~~~~~-----~~~~~~g~i~~g-~~n~iP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~ 328 (434)
T 3ife_A 255 KNKMRNATKLAMEFNGHLPVEEAPE-----YTEGYEGFYHLL-SLNGDVEQSKAYYIIRDFDRKNFEARKNTIENIVKQM 328 (434)
T ss_dssp TTTCBCHHHHHHHHHHTSCTTCSGG-----GCCTTCCEEEEE-EEEECSSEEEEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred cccchhHHHHHHHHHHhcccccCCC-----cceeeeEEEEee-eEeEecCeEEEEEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998762111 112223334443 3788999999999999999999999999999999998
Q ss_pred HHhcC-CeEEEEeeccCCCC----ccccCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhh-cCeEEEEeccCC
Q 014490 316 ASVQR-CNATVTFDDKSFYP----VTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMND 389 (423)
Q Consensus 316 ~~~~~-~~~~~~~~~~~~~~----~~~~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~ 389 (423)
+.+++ .++++++ ...++ +.+.|+++++.+++++++ +|.++ .....+|++|+++|.+. +|++++++|
T Consensus 329 ~~~~g~~~~~v~~--~~~~~~~~~~~~~d~~l~~~~~~a~~~-~G~~~--~~~~~~ggtD~~~~~~~GiP~~~~g~g--- 400 (434)
T 3ife_A 329 QEKYGQDAVVLEM--NDQYYNMLEKIEPVREIVDIAYEAMKS-LNIEP--NIHPIRGGTDGSQLSYMGLPTPNIFTG--- 400 (434)
T ss_dssp HHHHCGGGEEEEE--EEEECCTHHHHGGGTHHHHHHHHHHHH-TTCCC--EECCBSSCCHHHHHHHTTCCCCEECCS---
T ss_pred HHhcCCceEEEEE--eecccchhccccCCHHHHHHHHHHHHH-hCCCC--EEeecccCchHHHHhhCCCcEEEeCCC---
Confidence 88887 5566655 22333 357788999999999998 58765 33567899999999988 998765433
Q ss_pred CCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 390 ETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 390 ~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
+ ..+|++||++++++|.+++++|+.++.
T Consensus 401 ----~-~~~H~~~E~i~~~~l~~~~~~~~~~l~ 428 (434)
T 3ife_A 401 ----G-ENYHGKFEYVSVDVMEKAVQVIIEIAR 428 (434)
T ss_dssp ----E-ESTTSTTCEEEHHHHHHHHHHHHHHHH
T ss_pred ----C-CCCcCCceeecHHHHHHHHHHHHHHHH
Confidence 2 259999999999999999999999875
No 19
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=100.00 E-value=1.1e-48 Score=382.78 Aligned_cols=330 Identities=16% Similarity=0.103 Sum_probs=268.6
Q ss_pred HHHHHHHHHhHhCCCCC---CCcHHHHHHHHHHHHhCCCCeEecccCceEEEEEC---CCCCcEEEEEEecccccCcCCC
Q 014490 50 YWMVNIRRKIHENPELG---FQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIG---TGQPPFVALRADMDALAMEESV 123 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s---~~E~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~---~~~~~~ill~~H~Dtvp~~~~~ 123 (423)
+++++++++|++|||+| ++|.++++||.++|+++|++++.. ..|+++.+. ++++|+|+|.+||||||. .
T Consensus 6 ~~~~~~l~~l~~ips~s~~~~~e~~~~~~l~~~l~~~G~~~~~~--~~~~~~~~~~~~~~~~~~i~l~aH~D~vp~---~ 80 (364)
T 2rb7_A 6 QHIVELTSDLIRFPSMHSRPEQISRCAGFIMDWCAQNGIHAERM--DHDGIPSVMVLPEKGRAGLLLMAHIDVVDA---E 80 (364)
T ss_dssp HHHHHHHHHHHTSCCCTTCHHHHHHHHHHHHHHHHHTTCCCEEE--EETTEEEEEECSBTTEEEEEEEEECCCCCC---C
T ss_pred HHHHHHHHHHHcCCCCCCCcchHHHHHHHHHHHHHHcCCeEEEe--cCCCceEEEEEcCCCCCeEEEECccCcCCC---C
Confidence 67999999999999999 788999999999999999998764 367888875 234589999999999985 3
Q ss_pred CCcccC-CCCCccccCCc---hHHHHHHHHHHHHHHhccccC---Cce--EEEEEecCCC-Cc-ccHHHHHhcCCCcccc
Q 014490 124 EWEHKS-KVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEI---KGT--IVLVFQPAEE-GG-GGAKKMLDAGALENVE 192 (423)
Q Consensus 124 ~w~~~~-~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~---~~~--i~~~~~~~EE-g~-~Ga~~~~~~~~~~~~d 192 (423)
..||.. .++|++||||+ |++++++|+|+++|++.+..+ +++ |.|+|+++|| ++ .|++.+++++ ++|
T Consensus 81 ~~p~~~~~~~g~~~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~~g~~~v~~~~~~~EE~~g~~G~~~~~~~~---~~d 157 (364)
T 2rb7_A 81 DDLFVPRVENDRLYGRGANDDKYAVALGLVMFRDRLNALKAAGRSQKDMALGLLITGDEEIGGMNGAAKALPLI---RAD 157 (364)
T ss_dssp GGGGSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEEESCGGGTSTTTHHHHGGGC---EEE
T ss_pred CCCCccEEECCEEEecccccccHHHHHHHHHHHHHHHhCCCCcccCCCccEEEEEEeccccCchhhHHHHHhcC---CCC
Confidence 556664 35899999998 689999999999999877666 568 9999999999 44 7999998875 455
Q ss_pred eeeeeccCCCCCCceEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhcccCCC-C--CCceE
Q 014490 193 AIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADP-L--DSQVL 269 (423)
Q Consensus 193 ~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~-~--~~~t~ 269 (423)
+++ +.++++|++ +.. +++|..+++|+++|+++|++.|+.|.|||..+++++.+|+.+.. ++ . +.+++
T Consensus 158 ~~i--~~d~~~p~~-i~~----~~~G~~~~~i~v~G~~~Ha~~P~~g~nAi~~~~~~i~~l~~~~~---~~~~~~~~~~~ 227 (364)
T 2rb7_A 158 YVV--ALDGGNPQQ-VIT----KEKGIIDIKLTCTGKAAHGARPWMGVNAVDLLMEDYTRLKTLFA---EENEDHWHRTV 227 (364)
T ss_dssp EEE--ECSSSBTTE-EEE----EECEEEEEEEEEECBCEETTSGGGSBCHHHHHHHHHHHHHTTSC---CCCTTCCSCEE
T ss_pred EEE--EccCCcccc-eEE----EeeeEEEEEEEEEeecccCCCCCCCcCHHHHHHHHHHHHHhhcc---chhhcCCCceE
Confidence 544 456677877 433 34689999999999999999999999999999999999988732 22 2 46899
Q ss_pred EEEEEecCCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCccccCHHHHHHHHHH
Q 014490 270 TVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKV 349 (423)
Q Consensus 270 ~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~ 349 (423)
+++.|+||...|+||++|++.+|+|++|.++.+++.+++++++++ +++... .+++ ..+.++++++.++++
T Consensus 228 ~vg~i~gG~~~NviP~~a~~~~~iR~~~~~~~~~i~~~i~~~~~~-------~v~~~~--~~~~-~~~~~~~l~~~~~~~ 297 (364)
T 2rb7_A 228 NLGRIRAGESTNKVPDVAEGWFNIRVTEHDDPGALIDKIRKTVSG-------TVSIVR--TVPV-FLAADSPYTERLLAL 297 (364)
T ss_dssp EEEEEEECSCTTEECSEEEEEEEEEECTTSCHHHHHHHHHHHCSS-------EEEEEE--EECC-EECCCCHHHHHHHHH
T ss_pred EEEEEecCCcCcccCcceEEEEEEeeCCCCCHHHHHHHHHHHhhh-------hEEecc--CCcc-ccCCCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999888753 344211 2222 234467899999998
Q ss_pred HHHhcCCcccccCCCCCCCchHHHHHhh-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 350 AADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 350 ~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
++ .+|. ...|++|+++|.+. +|++. +| ||+....|++||++++++|.+++++|+.++.
T Consensus 298 ~~-~~g~-------~~~g~~D~~~~~~~~~p~v~--~G-----p~~~~~~H~~~E~i~~~~l~~~~~~~~~~~~ 356 (364)
T 2rb7_A 298 SG-ATAG-------KAHGASDARYLGENGLTGVV--WG-----AEGFNTLHSRDECLHIPSLQSIYDPLMQLAR 356 (364)
T ss_dssp HC-CEEE-------EESSCCGGGGTGGGTCCEEE--CC-----CCCTTCTTSTTCEEETTHHHHHHHHHHHHHH
T ss_pred HH-hcCC-------CCCCCchHHHHHhcCCCEEE--EC-----CCCccccCCCCccccHHHHHHHHHHHHHHHH
Confidence 87 4453 15788999999984 89765 56 4444124999999999999999999999875
No 20
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=100.00 E-value=1.1e-47 Score=389.58 Aligned_cols=355 Identities=10% Similarity=0.062 Sum_probs=245.2
Q ss_pred hHHHHhhcCchhHHHHHHHHHHhHhCCCCCCCc------------HHHHHHHHHHHHhCCCCeEecccCceEEEEEC-CC
Q 014490 37 VKFLDFAKKPEIFYWMVNIRRKIHENPELGFQE------------FETSKLIRAELDQMGIPYKFPVAVTGVVGYIG-TG 103 (423)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~E------------~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~-~~ 103 (423)
.++.++++.++ +++++++++|++|||+|++| .++++||.++|+++||+++.. .|+++... +.
T Consensus 23 ~~i~~~i~~~~--~~~~~~l~~lv~ips~s~~e~~~~~~p~g~~~~~~~~~l~~~l~~~G~~~~~~---~~~~~~~~~g~ 97 (492)
T 3khx_A 23 SMWKEKVQQYE--DQIINDLKGLLAIESVRDDAKASEDAPVGPGPRKALDYMYEIAHRDGFTTHDV---DHIAGRIEAGK 97 (492)
T ss_dssp CTTHHHHHTTH--HHHHHHHHHHHTSCCCCCSSSCCSSSTTCHHHHHHHHHHHHHHHHTTCEEEEE---TTTEEEEEEEC
T ss_pred HHHHHHHHHhH--HHHHHHHHHHhcCCCCCCCcccccccccchHHHHHHHHHHHHHHHcCCcceEe---CCEEEEEEeCC
Confidence 46788888888 99999999999999999987 489999999999999998764 24555442 23
Q ss_pred CCcEEEEEEecccccCcCCCCCc---cc-CCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-C
Q 014490 104 QPPFVALRADMDALAMEESVEWE---HK-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-G 175 (423)
Q Consensus 104 ~~~~ill~~H~Dtvp~~~~~~w~---~~-~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g 175 (423)
++|+|+|+|||||||+++ .|. |. .++||++||||+ |++++++|+|+++|++.+..++++|.|+|+++|| |
T Consensus 98 ~~~~i~l~~H~D~vp~~~--~w~~~Pf~~~~~~g~l~GrG~~D~Kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g 175 (492)
T 3khx_A 98 GNDVLGILCHVDVVPAGD--GWDSNPFEPVVTEDAIIARGTLDDKGPTIAAYYAIKILEDMNVDWKKRIHMIIGTDEESD 175 (492)
T ss_dssp SSCEEEEEEECCCCCCCS--CCSSCTTSCEECSSEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEEECCTTCC
T ss_pred CCCEEEEEEeccCCCCCC--CcccCCCceEEECCEEEecCCccCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCccCC
Confidence 359999999999999975 684 44 367899999997 8999999999999999888889999999999999 7
Q ss_pred cccHHHHHhcCCCcccceeeeeccCCCC------------------------------------------CCce--EEee
Q 014490 176 GGGAKKMLDAGALENVEAIFGLHVSSLF------------------------------------------PVGT--VASR 211 (423)
Q Consensus 176 ~~Ga~~~~~~~~~~~~d~~i~~~~~~~~------------------------------------------p~g~--~~~~ 211 (423)
+.|+++++++.. .+|+.+.. |... |... +...
T Consensus 176 ~~g~~~~~~~~~--~~~~~~~~--d~~~p~~~g~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~n~vpd~~~aiv~e 251 (492)
T 3khx_A 176 WKCTDRYFKTEE--MPTLGFAP--DAEFPCIHGEKGITTFDLVQNKLTEDQDEPDYELITFKSGERYNMVPDHAEARVLV 251 (492)
T ss_dssp CCTTSHHHHHSC--CCSEEECS--SCSSCSCCCBCEEEEEEEEECCCCCCCCCCSEEEEEEEECSCTTSCCCEEEEEEEE
T ss_pred CcCHHHHHHhCc--CCCEEEec--CCCccEEEecCcEEEEEEEEeccccccccccceeEEecccccCCcCCchHheEeec
Confidence 799999998643 23333221 1111 1100 1111
Q ss_pred c---------------CcccCcce-----EEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHH------Hhhc---c---
Q 014490 212 P---------------GPTLAAGG-----FFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQ------HLVS---R--- 259 (423)
Q Consensus 212 ~---------------g~~~~g~~-----~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~------~~~~---~--- 259 (423)
+ ..+.+|.. +++|+++|+++|+|.|+.|+|||..+++++.+|+ .+.. .
T Consensus 252 pt~~~~~~~~~~~~~~~~g~kG~~~~~~~~~~i~v~GkaaHas~P~~G~NAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~ 331 (492)
T 3khx_A 252 KENMTDVIQDFEYFLEQNHLQGDSTVDSGILVLTVEGKAVHGMDPSIGVNAGLYLLKFLASLNLDNNAQAFVAFSNRYLF 331 (492)
T ss_dssp CSCHHHHHHHHHHHHHHTTCEEEEEEETTEEEEEEECBCCCC------BCHHHHHHHHHTTSCBCHHHHHHHHHHHHHTT
T ss_pred ccchHHHHHHHHHHHhhcCceeEEEecCCeEEEEEEeEEcccCCCccCccHHHHHHHHHHhcCCCchHHHHHHHHHHhhC
Confidence 1 12336778 9999999999999999999999999999999886 2210 0
Q ss_pred -----------cCC-CCCCceEEEEEEecCCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEe
Q 014490 260 -----------EAD-PLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTF 327 (423)
Q Consensus 260 -----------~~~-~~~~~t~~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~ 327 (423)
..+ ..+..++|++.|++|. |++|++.+|+|+++.++.+++.++++++++ .+++++++..
T Consensus 332 ~~~~~~~l~i~~~d~~~G~~t~n~g~i~~g~-----P~~a~~~idiR~~~~~~~~~v~~~i~~~~~----~~g~~~~i~~ 402 (492)
T 3khx_A 332 NSDFGEKMGMKFHTDVMGDVTTNIGVITYDN-----ENAGLFGINLRYPEGFEFEKAMDRFANEIQ----QYGFEVKLGK 402 (492)
T ss_dssp TCTTSGGGTCC-------CCEEEEEEEEEET-----TTCCEEEEEEEECTTCCHHHHHHHHHHHHG----GGTEEEEEEE
T ss_pred CCCCccccCCccccCCcCccEEeeeEEEEec-----CCEEEEEEEeeCCCCCCHHHHHHHHHHHHH----HcCCEEEEec
Confidence 011 2457899999999986 999999999999999999999999988875 3466666654
Q ss_pred eccCCCCccccCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhhcCeEEEEeccCCCCCCCCCCCCCCCccCCC
Q 014490 328 DDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNE 407 (423)
Q Consensus 328 ~~~~~~~~~~~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~ 407 (423)
..+...++.|+++++.+++++++.+|.++ .+...+|++|+++|.+.+| +|+.. ||+...+|++||++++
T Consensus 403 --~~~p~~~~~d~~lv~~l~~a~~~~~G~~~--~~~~~gggtDa~~~~~~v~-----~G~~f--Pg~~~~~H~~dE~v~i 471 (492)
T 3khx_A 403 --VQPPHYVDKNDPFVQKLVTAYRNQTNDMT--EPYTIGGGTYARNLDKGVA-----FGAMF--SDSEDLMHQKNEYITK 471 (492)
T ss_dssp --EECCBCCGGGCHHHHHHHHHHHTTCC--------------------------------------------CCSCEEEH
T ss_pred --cCCceecCCCcHHHHHHHHHHHHHhCCCC--eEEeeehhHHHHHhhCceE-----ECCcC--CCCCCCCCCCccCcCH
Confidence 21222245678999999999999888876 4567899999999986444 34333 6666789999999999
Q ss_pred CchHHHHHHHHHHHh
Q 014490 408 DALPYGAALHASLAT 422 (423)
Q Consensus 408 ~~l~~~~~~~~~~i~ 422 (423)
+++.+++++|+.++.
T Consensus 472 ~~l~~~~~i~~~~l~ 486 (492)
T 3khx_A 472 KQLFNATSIYLEAIY 486 (492)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999885
No 21
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=100.00 E-value=1.6e-46 Score=374.23 Aligned_cols=341 Identities=15% Similarity=0.142 Sum_probs=276.6
Q ss_pred HHHHHHHHHhHhCCCCCC----------CcHHHHHHHHHHHHhCCCC-eEecccCceEEEEECCC---CCcEEEEEEecc
Q 014490 50 YWMVNIRRKIHENPELGF----------QEFETSKLIRAELDQMGIP-YKFPVAVTGVVGYIGTG---QPPFVALRADMD 115 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~----------~E~~~~~~l~~~l~~~g~~-~~~~~~~~nvia~~~~~---~~~~ill~~H~D 115 (423)
+++++++++|++|||+|+ +|.++++||.++|+++|++ ++. +..+||+++++++ ++|+|+|.||||
T Consensus 2 ~~~~~~l~~Lv~i~s~s~~~~~~~p~~~~e~~~~~~l~~~l~~~G~~~~~~-~~~~nvia~~~g~~~~~~~~i~l~aH~D 80 (417)
T 1fno_A 2 DKLLERFLHYVSLDTQSKSGVRQVPSTEGQWKLLRLLKQQLEEMGLVNITL-SEKGTLMATLPANVEGDIPAIGFISHVD 80 (417)
T ss_dssp CSHHHHHHHHHTSCCBCCSSCSSSSSSHHHHHHHHHHHHHHHHHTCEEEEE-CTTCCEEEEECCSSCSCCCCEEEEEECC
T ss_pred hHHHHHHHHhEEecCCCCcccCCCCCCccHHHHHHHHHHHHHHcCCCeEEE-CCCceEEEEECCCCCCCCCceEEEEecc
Confidence 347889999999999998 6789999999999999998 654 4578999999653 358999999999
Q ss_pred cccCcCCCCCccc--------CC-----------------------CCCccccCC-----c--hHHHHHHHHHHHHHHhc
Q 014490 116 ALAMEESVEWEHK--------SK-----------------------VPGKMHACG-----H--DAHVAMLLGAAKMLQVF 157 (423)
Q Consensus 116 tvp~~~~~~w~~~--------~~-----------------------~~g~~~grG-----~--k~~~a~~l~a~~~l~~~ 157 (423)
|||..+ .|.++ .. .||++|||| + |++++++|+|++.|++.
T Consensus 81 ~Vp~~~--~~~~~p~~~~~~~g~~i~~~~g~~~~~~~~~~~~~~~~gd~~l~grGat~l~~D~K~g~a~~l~a~~~l~~~ 158 (417)
T 1fno_A 81 TSPDFS--GKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVLHQLLGQTLITTDGKTLLGADDKAGVAEIMTALAVLKGN 158 (417)
T ss_dssp BCTTSC--CSSCCCEEETTCCSSCEECSSSSCEECTTTCGGGGGCTTSCEEECCSSSCCCHHHHHHHHHHHHHHHHHHSS
T ss_pred ccCCCC--CCCCCceEEecCCCCeecccccccccchhhcchhhhhcCCcEEEcCCccccccccHHhHHHHHHHHHHHHhC
Confidence 999875 46432 11 256899999 4 69999999999999998
Q ss_pred cccCCceEEEEEecCCCCcccHHHHHhcCCCcccceeeeeccCCCCCCceEEeecCcccCcceEEEEEEEeCCCCCC-CC
Q 014490 158 RHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAA-IP 236 (423)
Q Consensus 158 ~~~~~~~i~~~~~~~EEg~~Ga~~~~~~~~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~-~p 236 (423)
+ .++++|+|+|+++||.+.|++.+.+++. .+|+++.++. + |.+.+. ...+|..+++|+++|+++|++ .|
T Consensus 159 ~-~~~~~v~~~~~~~EE~g~Ga~~~~~~~~--~~d~~i~~d~--~-~~g~i~----~~~~g~~~~~i~~~G~~~Hs~~~p 228 (417)
T 1fno_A 159 P-IPHGDIKVAFTPDEEVGKGAKHFDVEAF--GAQWAYTVDG--G-GVGELE----FENFNAASVNIKIVGNNVHPGTAK 228 (417)
T ss_dssp S-CCCCCEEEEEESCGGGTCTTTTCCHHHH--CCSEEEECCC--C-STTBEE----CCBCEEEEEEEEEECBCCCGGGCT
T ss_pred C-CCCCcEEEEEEeccccCCChhhhchhhc--CCCEEEEeCC--C-CcCeeE----EecCCceeEEEEEEeeccCCCCCc
Confidence 8 7889999999999993389988865443 4567666543 2 556543 346799999999999999999 69
Q ss_pred CCCCcHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEecCCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHH
Q 014490 237 QHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQA 316 (423)
Q Consensus 237 ~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~ 316 (423)
+.|.|||..+++++.+|+.+..+.......++++++.|+|| |++|++.+|+|+.|.++.+++.++|++++++.+
T Consensus 229 ~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~v~~i~gG------p~~a~~~~d~R~~~~~~~~~~~~~i~~~~~~~~ 302 (417)
T 1fno_A 229 GVMVNALSLAARIHAEVPADEAPETTEGYEGFYHLASMKGT------VDRAEMHYIIRDFDRKQFEARKRKMMEIAKKVG 302 (417)
T ss_dssp TTCBCHHHHHHHHHHTSCTTSSGGGCCTTCCEEEEEEEEEC------SSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHT
T ss_pred cccCCHHHHHHHHHHhhhccCCcccccccccEEEEEEEeec------cCeEEEEEEEeCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999887543333334568999999988 999999999999999999999999999999888
Q ss_pred HhcCCe--EEEEeeccCCCCc----cccCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhh-cCeEEEEeccCC
Q 014490 317 SVQRCN--ATVTFDDKSFYPV----TVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMND 389 (423)
Q Consensus 317 ~~~~~~--~~~~~~~~~~~~~----~~~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~ 389 (423)
..++.. +++++ ...+++ ++.|+++++.+++++++. |.++ .....+|++|+++|... +|++.+ |+
T Consensus 303 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~-g~~~--~~~~~~ggtD~~~~~~~gip~v~~--G~-- 373 (417)
T 1fno_A 303 KGLHPDCYIELVI--EDSYYNMREKVVEHPHILDIAQQAMRDC-HITP--EMKPIRGGTDGAQLSFMGLPCPNL--FT-- 373 (417)
T ss_dssp TTCCTTCCEEEEE--EEEECCCHHHHHTSTHHHHHHHHHHHHT-TCCC--BCCCBSSCCHHHHHTTTTCCCCEE--CC--
T ss_pred HHcCCCceEEEEE--eccccchhccccCCCHHHHHHHHHHHHc-CCCc--eeccceeccchHhHHhcCCCEEEE--cC--
Confidence 777643 55555 223332 467889999999999994 8865 34577899999999887 998754 53
Q ss_pred CCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 390 ETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 390 ~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
|.. .+|++||+++++++.+++++|+.++.
T Consensus 374 ---~~~-~~H~~~E~i~~~~l~~~~~~~~~~~~ 402 (417)
T 1fno_A 374 ---GGY-NYHGKHEFVTLEGMEKAVQVIVRIAE 402 (417)
T ss_dssp ---SEE-STTSTTCEEEHHHHHHHHHHHHHHHH
T ss_pred ---CCC-CCCCcccccCHHHHHHHHHHHHHHHH
Confidence 222 48999999999999999999999875
No 22
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=100.00 E-value=1.9e-45 Score=365.32 Aligned_cols=340 Identities=19% Similarity=0.186 Sum_probs=281.9
Q ss_pred HHHHHHHHHhHhCCCC----------CCCcHHHHHHHHHHHHhCCCCeEecccCceEEEEECCC-C-CcEEEEEEecccc
Q 014490 50 YWMVNIRRKIHENPEL----------GFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG-Q-PPFVALRADMDAL 117 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~----------s~~E~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~~-~-~~~ill~~H~Dtv 117 (423)
+++++++++|++||++ |++|.++++||.++|+++|++++.+. ..|++++++++ + +|+|+|.+|||+|
T Consensus 5 ~~~~~~l~~l~~i~s~~~~g~~r~~~s~~e~~~~~~l~~~l~~~g~~~~~d~-~gnv~a~~~g~~~~~~~i~l~aH~D~v 83 (408)
T 3n5f_A 5 ERLWQRLMELGEVGKQPSGGVTRLSFTAEERRAKDLVASYMREAGLFVYEDA-AGNLIGRKEGTNPDATVVLVGSHLDSV 83 (408)
T ss_dssp HHHHHHHHHHHTTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHHTCEEEECT-TCCEEEEECCSSTTSCEEEEEEESCCC
T ss_pred HHHHHHHHHHHccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEEcC-CCCEEEEecCCCCCCCEEEEEecCCCC
Confidence 6789999999999994 67899999999999999999987743 45999999654 2 6999999999999
Q ss_pred cCcCCCCCcccCCCCCccccCCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCC------cccHHHHHh-------
Q 014490 118 AMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEG------GGGAKKMLD------- 184 (423)
Q Consensus 118 p~~~~~~w~~~~~~~g~~~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg------~~Ga~~~~~------- 184 (423)
|.+ |.. ..|+|++++|++++.|++.+..++++|.|+|+++||+ +.|++.++.
T Consensus 84 ~~~------------g~~---d~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~~~~~~g~~Gs~~~~~~~~~~~~ 148 (408)
T 3n5f_A 84 YNG------------GCF---DGPLGVLAGVEVVQTMNEHGVVTHHPIEVVAFTDEEGARFRFGMIGSRAMAGTLPPEAL 148 (408)
T ss_dssp TTB------------CSS---TTHHHHHHHHHHHHHHHHTTCCCSSCEEEEEESCSSCTTTTCCCHHHHHHHTCCCGGGG
T ss_pred CCC------------Ccc---CCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCccccccCCCCcCHHHHHcCCCHHHh
Confidence 964 211 2368999999999999998888999999999999994 358998872
Q ss_pred -----cC-----------C----C-----c--ccceeeeeccCCC---CCCc-eEEeecCcccCcceEEEEEEEeCCCCC
Q 014490 185 -----AG-----------A----L-----E--NVEAIFGLHVSSL---FPVG-TVASRPGPTLAAGGFFEAVINGKGGHA 233 (423)
Q Consensus 185 -----~~-----------~----~-----~--~~d~~i~~~~~~~---~p~g-~~~~~~g~~~~g~~~~~i~v~G~~~Hs 233 (423)
+| + + + ++|+++.+|.+++ ++.+ .+... .+++|..+++|+++|+++|+
T Consensus 149 ~~~~~~G~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~lhi~~g~~le~~~~~~gi~--~~~~g~~~~~i~v~G~~~Ha 226 (408)
T 3n5f_A 149 ECRDAEGISLAEAMKQAGLDPDRLPQAARKPGTVKAYVELHIEQGRVLEETGLPVGIV--TGIAGLIWVKFTIEGKAEHA 226 (408)
T ss_dssp SCBCTTCCBHHHHHHHTTCCGGGGGGGCCCTTTEEEEEEEEECSSSHHHHHTCSEEEE--EEECEEEEEEEEEECCCEET
T ss_pred hccCCCCCCHHHHHHHhCCChhhhhhcccCccCccEEEEEeeccchhHHHcCCCeEEE--EEeccceEEEEEEEEEcCcC
Confidence 22 1 1 1 4677888887654 1111 12211 23579999999999999999
Q ss_pred -CCC-CCCCcHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEecC-CCCccCCCcEEEEEEEecCChhhHHHHHHHHHH
Q 014490 234 -AIP-QHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGG-GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEE 310 (423)
Q Consensus 234 -~~p-~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gg-~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~ 310 (423)
+.| +.+.||+..+++++.+|+.+. +..+ ..+++++.|+|| .+.|+||++|++.+|+|+.|.++.+++.++|++
T Consensus 227 gs~P~~~g~nAi~~aa~~i~~l~~~~-~~~~---~~~~~vg~i~gG~~~~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~ 302 (408)
T 3n5f_A 227 GATPMSLRRDPMAAAAQIIIVIEEEA-RRTG---TTVGTVGQLHVYPGGINVIPERVEFVLDLRDLKAEVRDQVWKAIAV 302 (408)
T ss_dssp TTSCTTTCCCHHHHHHHHHHHHHHHH-HHHS---SCEEEEEEEEEESCCTTEECSEEEEEEEEEESSHHHHHHHHHHHHH
T ss_pred CCCccccccCHHHHHHHHHHHHHHHH-HhcC---CcEEEEEEEEecCCCCcCcCCeEEEEEEEeCCCHHHHHHHHHHHHH
Confidence 589 589999999999999999876 3222 589999999997 899999999999999999999999999999999
Q ss_pred HHHHHHHhcCCeEEEEeeccCCCCccccCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhhcCeEEEEeccCCC
Q 014490 311 VVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDE 390 (423)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~g~~~~ 390 (423)
++++.+..+++++++++ ...+|++.+|+++++.++++++++ |.++. ....+|++|+++|.+.+|+++++.|...
T Consensus 303 ~~~~~a~~~g~~~~i~~--~~~~p~~~~d~~l~~~~~~a~~~~-g~~~~--~~~~~ggtD~~~~~~~iP~~~~~~~~~~- 376 (408)
T 3n5f_A 303 RAETIAKERNVRVTTER--LQEMPPVLCSDEVKRAAEAACQKL-GYPSF--WLPSGAAHDSVQLAPICPIGMIFVRSQD- 376 (408)
T ss_dssp HHHHHHHHHTCEEEEEE--EEEECCEECCHHHHHHHHHHHHHH-TCCCC--EEEESSCCTTTTTTTTSCEEEEEECCGG-
T ss_pred HHHHHHHHhCCeEEEEE--ecCCCCcCCCHHHHHHHHHHHHHc-CCCcc--cCCCcCchHHHHHHHHCCEEEEEeCCCC-
Confidence 99998888899998887 567888888999999999999998 87653 3456789999999888998776655332
Q ss_pred CCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 391 TKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 391 ~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
...|++||++++++|.+++++|+.++.
T Consensus 377 -----~~~H~~~E~i~~~~l~~~~~~~~~~~~ 403 (408)
T 3n5f_A 377 -----GVSHSPAEWSTKEDCAAGAEVLYHTVW 403 (408)
T ss_dssp -----GCCSSTTCCCCHHHHHHHHHHHHHHHH
T ss_pred -----CCCCCccccCCHHHHHHHHHHHHHHHH
Confidence 358999999999999999999999875
No 23
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=100.00 E-value=1.2e-45 Score=368.51 Aligned_cols=341 Identities=16% Similarity=0.136 Sum_probs=278.9
Q ss_pred HHHHHHHHHhHhCCCCC----------CCcHHHHHHHHHHHHhCCCCeEecccCceEEEEECCC-C-CcEEEEEEecccc
Q 014490 50 YWMVNIRRKIHENPELG----------FQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG-Q-PPFVALRADMDAL 117 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s----------~~E~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~~-~-~~~ill~~H~Dtv 117 (423)
+++++++++|++|||++ ++|.++++||.++|+++|++++.+. .+|++++++++ + +|+|+|.+|||||
T Consensus 9 ~~~~~~l~~lv~i~s~s~~g~~~~~~s~~e~~~~~~i~~~l~~~G~~v~~~~-~gnv~a~~~g~~~~~~~i~l~~H~D~V 87 (423)
T 1z2l_A 9 QAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRFDE-VGNLYGRLNGTEYPQEVVLSGSHIDTV 87 (423)
T ss_dssp HHHHHHHHHHHHTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHTTCEEEECT-TSCEEEEECCSSEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHhcCCCCCCCcccCcCCHHHHHHHHHHHHHHHHcCCEEEEec-CCcEEEEEcCCCCCCCEEEEEEecCCC
Confidence 77999999999999998 5689999999999999999887643 45999999654 2 3899999999999
Q ss_pred cCcCCCCCcccCCCCCccccCCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCc------ccHHHHHh----cC-
Q 014490 118 AMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG------GGAKKMLD----AG- 186 (423)
Q Consensus 118 p~~~~~~w~~~~~~~g~~~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg~------~Ga~~~~~----~~- 186 (423)
|.+ +| . ..|++++++|+|+++|++.+..++++|+|+|+++||++ .|++.+.. ++
T Consensus 88 p~~---g~---------~---D~k~g~a~~l~a~~~l~~~~~~~~~~v~~i~~~~EE~~~~~~g~~Gs~~~~~~~~~~~~ 152 (423)
T 1z2l_A 88 VNG---GN---------L---DGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWGSKNIFGLANPDDV 152 (423)
T ss_dssp TTB---CS---------S---TTHHHHHHHHHHHHHHHHHHCSCSEEEEEEEESCSSCCSSSCSCHHHHHHTTCCCGGGT
T ss_pred CCC---Cc---------c---CCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCccccccCCCcccHHHHHcCCCHHHH
Confidence 964 22 1 22789999999999999988889999999999999942 38888875 21
Q ss_pred -------------------CC---------cccceeeeeccCCC---CCCc-eEEeecCcccCcceEEEEEEEeCCCCCC
Q 014490 187 -------------------AL---------ENVEAIFGLHVSSL---FPVG-TVASRPGPTLAAGGFFEAVINGKGGHAA 234 (423)
Q Consensus 187 -------------------~~---------~~~d~~i~~~~~~~---~p~g-~~~~~~g~~~~g~~~~~i~v~G~~~Hs~ 234 (423)
+. .++|+++.+|.+++ ++++ .... ...++|..+++|+++|+++|+|
T Consensus 153 ~~~~~~d~~~~~~~~~~~G~~~~~~~p~~~~~~~~~~~~h~~~~~~~e~~~~~~~~--~~~~~g~~~~~i~v~G~~~Ha~ 230 (423)
T 1z2l_A 153 RNICDAKGNSFVDAMKACGFTLPNAPLTPRQDIKAFVELHIEQGCVLESNGQSIGV--VNAIVGQRRYTVTLNGESNHAG 230 (423)
T ss_dssp SSCCCSSSCCHHHHHHHTTCCCCSSCCCCCCCEEEEEEEEECCSSHHHHTTCCEEE--EEEECEEEEEEEEEECCCEETT
T ss_pred hhhcCcCCcCHHHHHHHcCCccccccccCCCCceEEEEEEeccCchHHHCCCCeEE--EeeEecceEEEEEEEeEcCCCC
Confidence 11 13567777776553 1111 1111 1235689999999999999999
Q ss_pred -CCC-CCCcHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEecC-CCCccCCCcEEEEEEEecCChhhHHHHHHHHHHH
Q 014490 235 -IPQ-HTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGG-GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEV 311 (423)
Q Consensus 235 -~p~-~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gg-~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~ 311 (423)
.|+ .|.|||..+++++..|+++..+. ++ .++++++.|+|| .+.|+||++|++.+|+|++|.++.+++.++|+++
T Consensus 231 ~~P~~~g~nAi~~~a~~i~~l~~~~~~~-~~--~~~~~vg~i~gg~~~~NvIP~~a~~~~d~R~~~~~~~~~i~~~i~~~ 307 (423)
T 1z2l_A 231 TTPMGYRRDTVYAFSRICHQSVEKAKRM-GD--PLVLTFGKVEPRPNTVNVVPGKTTFTIDCRHTDAAVLRDFTQQLEND 307 (423)
T ss_dssp TSCGGGCCCHHHHHHHHHHHHHHHHHHH-CT--TCEEECCCEEEESCCTTEECCEEEEEEEEEESSHHHHHHHHHHHHHH
T ss_pred CCccccCcCHHHHHHHHHHHHHHHHHhc-CC--CceEEEEEEeecCCcceeECCEEEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 695 89999999999999998876442 22 578999999997 8999999999999999999999999999999999
Q ss_pred HHHHHHhcCCeEEEEeeccCCCCccccCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhhcCeEEEEeccCCCC
Q 014490 312 VMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDET 391 (423)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~g~~~~~ 391 (423)
+++.+..++++++++. ...++++..|+++++.++++++++ |.++. ....+|++|+++|.+.+|++++ +|
T Consensus 308 ~~~~~~~~g~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~-g~~~~--~~~~~ggtD~~~~~~~~p~~~~-~~----- 376 (423)
T 1z2l_A 308 MRAICDEMDIGIDIDL--WMDEEPVPMNKELVATLTELCERE-KLNYR--VMHSGAGHDAQIFAPRVPTCMI-FI----- 376 (423)
T ss_dssp HHHHHHHHTCEEEEEE--EEEECCEECCHHHHHHHHHHHHHT-TCCEE--EEEESSCCTHHHHTTTSCEEEE-EE-----
T ss_pred HHHHHHHhCCeEEEEE--ecCCCCccCCHHHHHHHHHHHHHc-CCCeE--EecCCCcccHHHHHhhCCEEEE-Ee-----
Confidence 9998888898888876 556778888999999999999998 87653 3467899999999888998654 34
Q ss_pred CCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 392 KGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 392 pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
|+....+|++||++++++|.+++++|+.++.
T Consensus 377 p~~~~~~H~~~E~i~~~~l~~~~~~~~~~~~ 407 (423)
T 1z2l_A 377 PSINGISHNPAERTNITDLAEGVKTLALMLY 407 (423)
T ss_dssp CCGGGCCSSTTCCCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCccccCCHHHHHHHHHHHHHHHH
Confidence 2333469999999999999999999999875
No 24
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=100.00 E-value=6.4e-45 Score=369.50 Aligned_cols=343 Identities=17% Similarity=0.180 Sum_probs=270.4
Q ss_pred HHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEecccCceEEEEECCC----CCcEEEEEEecccccCcCCC--
Q 014490 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG----QPPFVALRADMDALAMEESV-- 123 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~~----~~~~ill~~H~Dtvp~~~~~-- 123 (423)
+++++++++|++|||+|++|.++++||.++|+++|++++.+ ..+|++++++++ ++|+|+|.||||+||.++..
T Consensus 11 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~-~~~nv~a~~~g~~g~~~~~~i~l~aH~D~vp~~~~~~~ 89 (487)
T 2qyv_A 11 KLLWQWFDQICAIPHPSYKEEQLAQFIINWAKTKGFFAERD-EVGNVLIRKPATVGMENRKPVVLQAHLDMVPQANEGTN 89 (487)
T ss_dssp HHHHHHHHHHHHSCCBTTCCHHHHHHHHHHHHHTTCEEEEC-TTCCEEEEECCCTTCTTBCCEEEEEESCBCCC------
T ss_pred HHHHHHHHHHHcCCCCCCcHHHHHHHHHHHHHHcCCEEEEc-CCCcEEEEeCCCCCCCCCCeEEEEccCCccCCCCCCCc
Confidence 77999999999999999999999999999999999988764 357999999652 35899999999999998754
Q ss_pred -CCcc---c-CCCCCccccCCc------hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHhcCCCccc
Q 014490 124 -EWEH---K-SKVPGKMHACGH------DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENV 191 (423)
Q Consensus 124 -~w~~---~-~~~~g~~~grG~------k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~~~~~~~~~~ 191 (423)
+|.. . .++||++||||+ |++++++|.+++. .+ .++++|.|+|+++|| |+.|++.+++++ + ..
T Consensus 90 ~~w~~~p~~~~~~dg~l~g~G~~lgaD~k~g~a~~l~a~~~---~~-~~~~~v~~~~~~~EE~g~~Ga~~~~~~~-~-~~ 163 (487)
T 2qyv_A 90 HNFDQDPILPYIDGDWVKAKGTTLGADNGIGMASALAVLES---ND-IAHPELEVLLTMTEERGMEGAIGLRPNW-L-RS 163 (487)
T ss_dssp ----CCCCCEEECSSEEEETTBCCCHHHHHHHHHHHHHHHC---SS-SCCSSEEEEEESCTTTTCHHHHTCCSSC-C-CC
T ss_pred cccccCCeeEEeeCCEEEeCCCCcCCcCHHHHHHHHHHHHh---CC-CCCCCEEEEEEeccccCCHHHHHHHHhc-c-CC
Confidence 7854 3 346899999998 3889999988862 33 377999999999999 778999998765 3 36
Q ss_pred ceeeeeccCCCCCCceEE--eecC------------cccCcceEEEEEEEe-CCCCCCCC-CCC-CcHHHHHHHHHHHHH
Q 014490 192 EAIFGLHVSSLFPVGTVA--SRPG------------PTLAAGGFFEAVING-KGGHAAIP-QHT-IDPIVAASNVIVSLQ 254 (423)
Q Consensus 192 d~~i~~~~~~~~p~g~~~--~~~g------------~~~~g~~~~~i~v~G-~~~Hs~~p-~~g-~nAi~~~~~~i~~l~ 254 (423)
|+++..++. +.+.+. ++.+ ..++| .+++|+++| +++|||.| +.+ .|||..+++++.+|+
T Consensus 164 d~~~~~d~~---~~~~i~~g~~g~~~~~~~~~~~~~~~~~g-~~~~i~v~G~~~~Hsg~~~~~g~~nAi~~~~~~i~~l~ 239 (487)
T 2qyv_A 164 EILINTDTE---ENGEIYIGCAGGENADLELPIEYQVNNFE-HCYQVVLKGLRGGHSGVDIHTGRANAIKVLLRFLAELQ 239 (487)
T ss_dssp SEEEECCCC---CTTEEEEEECEEEEEEEEEECCEEECCCS-EEEEEEEECCCCCBTTTTTTSCCCCHHHHHHHHHHHHH
T ss_pred CEEEEEccC---CCCeEEEeccCCcceeeeccccccccCCC-eEEEEEEEccCCccCCcccccCCCCHHHHHHHHHHHHh
Confidence 777765432 224442 2222 13456 889999999 89999986 676 799999999999998
Q ss_pred HhhcccCCCCCCceEEEEEEecCCCCccCCCcEEEEEEE----------------------------------------e
Q 014490 255 HLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTF----------------------------------------R 294 (423)
Q Consensus 255 ~~~~~~~~~~~~~t~~v~~i~gg~~~n~iP~~a~~~~d~----------------------------------------R 294 (423)
.+. ...+++++.|+||...|+||++|++.+++ |
T Consensus 240 ~~~-------~~~~~~v~~i~gG~~~NvIP~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 312 (487)
T 2qyv_A 240 QNQ-------PHFDFTLANIRGGSIRNAIPRESVATLVFNGDITVLQSAVQKFADVIKAELALTEPNLIFTLEKVEKPQQ 312 (487)
T ss_dssp HHC-------TTCCEEEEEEEEESCTTBCCCCEEEEEEECSCHHHHHHHHHHHHHHHHHHTTTTCTTCEEEEEECCCCSE
T ss_pred hcc-------CCCcEEEEEEeCCCcCcccCCceEEEEEecCCHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecccccc
Confidence 873 13689999999999999999999999999 8
Q ss_pred cCChhhHHHHHHHHHHH---------------------------------------------------HHHHHHhcCCeE
Q 014490 295 AFSKESIIQLKQRIEEV---------------------------------------------------VMKQASVQRCNA 323 (423)
Q Consensus 295 ~~~~~~~~~v~~~i~~~---------------------------------------------------~~~~~~~~~~~~ 323 (423)
++|.++.+.+.+.|+++ +++.+..+++++
T Consensus 313 ~~~~~~~~~i~~~i~~~~~gv~~~~~~~~~~~~~s~nl~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~g~~~ 392 (487)
T 2qyv_A 313 VFSSQCTKNIIHCLNVLPNGVVRNSDVIENVVETSLSIGVLKTEDNFVRSTMLVRSLIESGKSYVASLLKSLASLAQGNI 392 (487)
T ss_dssp EECHHHHHHHHHHHHHSCCEEEEECSSSTTCEEEEEEEEEEEECSSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHTCEE
T ss_pred ccCHHHHHHHHHHHHhCCCcceeeccccCCceEeccceEEEEEcCCeEEEEEEccCCCHHHHHHHHHHHHHHHHHcCceE
Confidence 88988888888877765 345666678777
Q ss_pred EEEeeccCCCCccc--cCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhhcCeE-EEEeccCCCCCCCCCCCCC
Q 014490 324 TVTFDDKSFYPVTV--NNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGY-FYYLGMNDETKGKFETGHS 400 (423)
Q Consensus 324 ~~~~~~~~~~~~~~--~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~-~~~~g~~~~~pg~~~~~H~ 400 (423)
++.. .+|++. .|+++++.+++++++++|.++. ....+|++|+++|.+.+|.+ ++.+|+ +. ..+|+
T Consensus 393 ~~~~----~~p~~~~~~d~~l~~~~~~~~~~~~G~~~~--~~~~~gg~D~~~~~~~~pg~~~v~~Gp-----~~-~~~H~ 460 (487)
T 2qyv_A 393 NLSG----DYPGWEPQSHSDILDLTKTIYAQVLGTDPE--IKVIHAGLECGLLKKIYPTIDMVSIGP-----TI-RNAHS 460 (487)
T ss_dssp EEEE----EECCBCCCSCCHHHHHHHHHHHHHHSSCCE--EEEESSCCTHHHHHHHCTTSEEEECCC-----CE-ESTTS
T ss_pred EECC----CCCCCCCCCCCHHHHHHHHHHHHHhCCCCe--EEEEeccccHHHHHhhCCCCCEEEECC-----CC-CCCCC
Confidence 6553 344443 5789999999999998898763 34678999999999876643 455674 22 46999
Q ss_pred CCccCCCCchHHHHHHHHHHHh
Q 014490 401 PYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 401 ~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
|||+++++++.+++++|+.++.
T Consensus 461 ~~E~v~~~~l~~~~~~~~~~l~ 482 (487)
T 2qyv_A 461 PDEKVHIPAVETYWKVLTGILA 482 (487)
T ss_dssp TTCEEEHHHHHHHHHHHHHHHH
T ss_pred CCceeEHHHHHHHHHHHHHHHH
Confidence 9999999999999999999875
No 25
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=100.00 E-value=1e-45 Score=373.71 Aligned_cols=339 Identities=14% Similarity=0.089 Sum_probs=276.6
Q ss_pred HHHHHHHHHh-HhCCCCC-----------------CCcHHHHHHHHHHHHhCCCCeEecccCceEEEEECCC-CCcEEEE
Q 014490 50 YWMVNIRRKI-HENPELG-----------------FQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG-QPPFVAL 110 (423)
Q Consensus 50 ~~~~~~~~~l-~~ips~s-----------------~~E~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~~-~~~~ill 110 (423)
+++++++++| ++|||+| ++|.++++||.++|+++|++++.+ ..+|++++++++ ++|+|+|
T Consensus 32 ~~~~~~l~~L~v~i~s~s~~~~~~~~~g~~r~~~s~~e~~~~~~l~~~l~~~G~~v~~d-~~gnvia~~~g~~~~~~i~l 110 (474)
T 2v8h_A 32 GRLNQTILETGSQFGGVARWGQESHEFGMRRLAGTALDGAMRDWFTNECESLGCKVKVD-KIGNMFAVYPGKNGGKPTAT 110 (474)
T ss_dssp THHHHHHHHHHHHTTEECCCSSSTTCCEECCCTTSHHHHHHHHHHHHHHHHTTCEEEEB-TTCCEEEEECCSSCCSCEEE
T ss_pred HHHHHHHHHHhhhcCCccccccccccCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEEe-cCceEEEEECCCCCCCeEEE
Confidence 6799999999 9999984 567899999999999999988764 456999999654 4579999
Q ss_pred EEecccccCcCCCCCcccCCCCCccccCCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCc------ccHHHHHh
Q 014490 111 RADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG------GGAKKMLD 184 (423)
Q Consensus 111 ~~H~Dtvp~~~~~~w~~~~~~~g~~~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg~------~Ga~~~~~ 184 (423)
+|||||||.+ +| | ..|++++++|+|+++|++.+..++++|.|+|+++||++ .|++.+..
T Consensus 111 ~~H~DtVp~~---g~----------~--D~k~gvaa~L~a~~~L~~~~~~~~~~v~lif~~dEE~~~~~~g~~Gs~~l~~ 175 (474)
T 2v8h_A 111 GSHLDTQPEA---GK----------Y--DGILGVLAGLEVLRTFKDNNYVPNYDVCVVVWFNAEGARFARSCTGSSVWSH 175 (474)
T ss_dssp EECCCCCSSB---CS----------S--TTHHHHHHHHHHHHHHHHHTCCCSSCEEEEECTTCSCSSSSCTTHHHHHHTT
T ss_pred EEecccCCCC---CC----------c--CCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCccCCCCCCCcccHHHHHh
Confidence 9999999976 24 1 34799999999999999988888999999999999942 48888854
Q ss_pred c---------------------------CCC---------cccceeeeeccCCCCCC---c-eEEeecCcccCcceEEEE
Q 014490 185 A---------------------------GAL---------ENVEAIFGLHVSSLFPV---G-TVASRPGPTLAAGGFFEA 224 (423)
Q Consensus 185 ~---------------------------~~~---------~~~d~~i~~~~~~~~p~---g-~~~~~~g~~~~g~~~~~i 224 (423)
. |+. .++++.+.+|.+++... + .... ..+.+|..+++|
T Consensus 176 ~~~~~~~~~~~d~~~~dg~~~~e~l~~~G~~~~~~~~~~~e~~~~~~~lHi~~g~~l~~~g~~~~i--~~~~~G~~~~~i 253 (474)
T 2v8h_A 176 DLSLEEAYGLMSVGEDKPESVYDSLKNIGYIGDTPASYKENEIDAHFELHIEQGPILEDENKAIGI--VTGVQAYNWQKV 253 (474)
T ss_dssp SSCHHHHHTCBCSSCSSCCBHHHHHHHHTCCCSBCSCTTTSCCSEEEEEEECCSSHHHHTTCSEEE--EEEECEEEEEEE
T ss_pred ccCHhhhhhhcccccccCccHHHHHHhcCCcccccccccccchhhheeeeeccCccccccCCccee--EEeecceEEEEE
Confidence 1 111 24556666665543211 1 1111 123468999999
Q ss_pred EEEeCCCCCC-CCC-CCCcHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEecC-CCCccCCCcEEEEEEEecCChhhH
Q 014490 225 VINGKGGHAA-IPQ-HTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGG-GAFNIIPDSVTIGGTFRAFSKESI 301 (423)
Q Consensus 225 ~v~G~~~Hs~-~p~-~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gg-~~~n~iP~~a~~~~d~R~~~~~~~ 301 (423)
+++|+++||| .|+ .+.|||..+++++.+|+.+..+. .++++++.|+|| .+.|+||++|++.+|+|++|.++.
T Consensus 254 ~v~G~~~Hsg~~P~~~g~nAi~~~a~~i~~l~~~~~~~-----~~t~~vg~i~gG~~~~NvIP~~a~~~~diR~~~~~~~ 328 (474)
T 2v8h_A 254 TVHGVGAHAGTTPWRLRKDALLMSSKMIVAASEIAQRH-----NGLFTCGIIDAKPYSVNIIPGEVSFTLDFRHPSDDVL 328 (474)
T ss_dssp EEECCCEETTTCCGGGCCCHHHHHHHHHHHHHHHHHHT-----TCEEECCCEEEESCCTTEECSEEEEEEEEEESCHHHH
T ss_pred EEEeecCCCCCCCcccCCCHHHHHHHHHHHHHHHHhhc-----CCEEEEEEEEecCCCCceeCCEEEEEEEecCCChHHH
Confidence 9999999999 597 79999999999999998876442 579999999998 899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHh---cCCeEEEEeeccCCCCccccCHHHHHHHHHHHHHhcC-C-cccccCCCCCCCchHHHHHh
Q 014490 302 IQLKQRIEEVVMKQASV---QRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLG-V-QNIKENRPLMGTEDFSFFAE 376 (423)
Q Consensus 302 ~~v~~~i~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~g-~-~~~~~~~~~~g~tD~~~~~~ 376 (423)
+++.++|++++++.+.. ++++++++. ...++++..|+++++.++++++++ | . ++ .....+|++|+++|.+
T Consensus 329 ~~i~~~i~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~d~~l~~~~~~a~~~~-G~~~~~--~~~~~~ggtD~~~~~~ 403 (474)
T 2v8h_A 329 ATMLKEAAAEFDRLIKINDGGALSYESET--LQVSPAVNFHEVCIECVSRSAFAQ-FKKDQV--RQIWSGAGHDSCQTAP 403 (474)
T ss_dssp HHHHHHHHHHHHHHTTCCTTCCCEEEEEE--EEEECCEECCHHHHHHHHHHHHHH-SCGGGE--EEEEESSCCTHHHHTT
T ss_pred HHHHHHHHHHHHHHHhhcccCCcEEEEEE--ecCCCCccCCHHHHHHHHHHHHHc-CCCCcc--eecCCcCCccHHHHHh
Confidence 99999999999987776 788888776 556777888999999999999998 8 6 55 2346789999999998
Q ss_pred hcCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 377 AIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 377 ~ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
.+|+++. +| |+....+|++||+++++++.+++++|+.++.
T Consensus 404 ~~P~~~~-fg-----p~~~~~~H~p~E~i~~~~l~~~~~~~~~~l~ 443 (474)
T 2v8h_A 404 HVPTSMI-FI-----PSKDGLSHNYYEYSSPEEIENGFKVLLQAII 443 (474)
T ss_dssp TSCEEEE-EE-----CCGGGCCSSTTCCCCHHHHHHHHHHHHHHHH
T ss_pred hCCEEEE-Ee-----CCCCCCCCCccccCCHHHHHHHHHHHHHHHH
Confidence 8997544 34 3333569999999999999999999999875
No 26
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=100.00 E-value=6.7e-45 Score=368.69 Aligned_cols=341 Identities=16% Similarity=0.142 Sum_probs=265.9
Q ss_pred HHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEecccCceEEEEECCC----CCcEEEEEEecccccCcCCC--
Q 014490 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG----QPPFVALRADMDALAMEESV-- 123 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~~----~~~~ill~~H~Dtvp~~~~~-- 123 (423)
+++++++++|++|||+|++|.++++||.++|+++|++++.+ ..+|++++++++ ++|+|+|.|||||||.++..
T Consensus 14 ~~~~~~~~~L~~ips~s~~e~~~~~~l~~~l~~~G~~v~~~-~~~nv~a~~~g~~g~~~~~~v~l~aH~D~vp~~~~~~~ 92 (490)
T 3mru_A 14 APLWQFFDKICSIPHPSKHEEALAQYIVTWATEQGFDVRRD-PTGNVFIKKPATPGMENKKGVVLQAHIDMVPQKNEDTD 92 (490)
T ss_dssp HHHHHHHHHHHHSCCBTTCCTTHHHHHHHHHHHTTCEEEEC-TTCCEEEEECCCTTCTTCCCEEEEEECCBCCCBCTTSC
T ss_pred HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCEEEEc-CCCeEEEEEcCCCCCCCCCeEEEEeccCCCCCCCCCcc
Confidence 77999999999999999999999999999999999998764 467999999642 46999999999999998653
Q ss_pred -CCccc----CCCCCccccCCc------hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHhcCCCccc
Q 014490 124 -EWEHK----SKVPGKMHACGH------DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENV 191 (423)
Q Consensus 124 -~w~~~----~~~~g~~~grG~------k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~~~~~~~~~~ 191 (423)
+|..+ .++||++||||+ |+++|++|.++ ++. ..++++|.|+|+++|| |+.|++.++++. + +.
T Consensus 93 ~~w~~~p~~~~~~~g~l~g~G~~lgaD~k~g~a~~l~~l---~~~-~~~~~~v~~~~~~~EE~g~~Ga~~~~~~~-~-~~ 166 (490)
T 3mru_A 93 HDFTQDPIQPYIDGEWVTAKGTTLGADNGIGMASCLAVL---ASK-EIKHGPIEVLLTIDEEAGMTGAFGLEAGW-L-KG 166 (490)
T ss_dssp CCTTTCCCCEEEETTEEEETTBCCCHHHHTTHHHHHHHH---HCS-SCCCCSEEEEEESCSSSTTGGGGTCCSSS-C-CS
T ss_pred cccccCCceEEeeCCeEecCCCccCCCCHHHHHHHHHHH---HhC-CCCCCCEEEEEEcccccccHhHHHhhhcc-c-CC
Confidence 68543 356899999998 47888888765 332 3468999999999999 779999997653 2 45
Q ss_pred ceeeeeccCCCCCCceE--Eeec------------CcccCcceEEEEEEEe-CCCCCCC-CCCCC-cHHHHHHHHHHHHH
Q 014490 192 EAIFGLHVSSLFPVGTV--ASRP------------GPTLAAGGFFEAVING-KGGHAAI-PQHTI-DPIVAASNVIVSLQ 254 (423)
Q Consensus 192 d~~i~~~~~~~~p~g~~--~~~~------------g~~~~g~~~~~i~v~G-~~~Hs~~-p~~g~-nAi~~~~~~i~~l~ 254 (423)
++++.++.. +.|.+ ++.. ...++|..+++|+++| +++||+. |+.|+ |||..+++++..|+
T Consensus 167 ~~~~~~d~~---~~g~~~~g~~~g~~~~~~~~~~~~~~~~g~~~~~i~v~G~~~gHs~~~p~~g~~nai~~~~~~l~~l~ 243 (490)
T 3mru_A 167 DILLNTDSE---QEGEVYMGCAGGIDGAMTFDITRDAIPAGFITRQLTLKGLKGGHSGCDIHTGRGNANKLIGRFLAGHA 243 (490)
T ss_dssp SEEEECCCC---CTTCCEEEECEEEEEEEEEECCEECCCTTEEEEEEEEECCCCEETTTSSSSCCCCHHHHHHHHHHHHT
T ss_pred CEEEEcCCC---CCCeEEEecCCccceEEEeeeeeeccCCCceEEEEEEECCCCcccccccccCCcCHHHHHHHHHHHHH
Confidence 666665432 22222 1100 2456799999999999 8999995 99999 99999999999987
Q ss_pred HhhcccCCCCCCceEEEEEEecCCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHH------------------
Q 014490 255 HLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQA------------------ 316 (423)
Q Consensus 255 ~~~~~~~~~~~~~t~~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~------------------ 316 (423)
+. .+++++.|+||.+.|+||++|++.+++|..+.+..++..+++.+.++...
T Consensus 244 ~~----------~~~~v~~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 313 (490)
T 3mru_A 244 QE----------LDLRLVEFRGGSLRNAIPREAFVTVALPAENQDKLAELFNYYTELLKTELGKIETDIVTFNEEVATDA 313 (490)
T ss_dssp TT----------TTCEEEEEEECSCTTEECCCEEEEEEEEGGGHHHHHHHHHHHHHHHHHHHTTTCCCCEEEEEECCCCC
T ss_pred hc----------CcEEEEEEECCCCCcccCCccEEEEEECcccHHHHHHHHHHHHHHHHHHhhccCCCeEEEEEecCCcc
Confidence 62 36899999999999999999999999987766655555555554443322
Q ss_pred --------------------------------------------------------------------------HhcCCe
Q 014490 317 --------------------------------------------------------------------------SVQRCN 322 (423)
Q Consensus 317 --------------------------------------------------------------------------~~~~~~ 322 (423)
..++.+
T Consensus 314 ~~~~~~~~~~~i~~l~~~~~G~~~~~~~~~g~v~~S~n~gv~~~~~~~~~~~~~~R~~~~~~~~~i~~~l~~~~~~~g~~ 393 (490)
T 3mru_A 314 QVFAIADQQRFIAALNACPNGVMRMSDEVEGVVETSLNVGVITTEENKVTVLCLIRSLIDSGRSQVEGMLQSVAELAGAQ 393 (490)
T ss_dssp CEECHHHHHHHHHHHHHSCCEEEEECTTTTSCEEEEEEEEEEEEETTEEEEEEEEEESSHHHHHHHHHHHHHHHHHTTCE
T ss_pred ccCCHHHHHHHHHHHHHCCCccceeccccCCCeeEEEEEEEEEEeCCEEEEEEEcCCCCchHHHHHHHHHHHHHHHcCCe
Confidence 223444
Q ss_pred EEEEeeccCCCCcc--ccCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhhcCeE-EEEeccCCCCCCCCCCCC
Q 014490 323 ATVTFDDKSFYPVT--VNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGY-FYYLGMNDETKGKFETGH 399 (423)
Q Consensus 323 ~~~~~~~~~~~~~~--~~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~-~~~~g~~~~~pg~~~~~H 399 (423)
+++. ..+|++ +.|+++++.+.+++++++|.++ .....+|++|++.|.+.+|.+ ++.+|+.. ..+|
T Consensus 394 ~~~~----~~~p~~~~~~d~~lv~~l~~a~~~~~G~~~--~~~~~ggg~d~~~~~~~~p~~~~v~fGp~~------~~~H 461 (490)
T 3mru_A 394 IEFS----GAYPGWKPDADSEIMAIFRDMYEGIYGHKP--NIMVIHAGLECGLFKEPYPNMDMVSFGPTI------KFPH 461 (490)
T ss_dssp EEEE----EEECCBCCCTTCHHHHHHHHHHHTTSSSCC--CCEEESSCCHHHHTTSSCTTCEEEECCCCE------ESTT
T ss_pred EEec----CCCCCCCCCCCCHHHHHHHHHHHHHHCCCC--eEEEEEecHHHHHHHHhCCCCCEEEECCCC------CCCC
Confidence 4332 345555 4568899999999999999876 445789999999999887753 44567543 2499
Q ss_pred CCCccCCCCchHHHHHHHHHHHh
Q 014490 400 SPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 400 ~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
+|||+++++++.+++++|..++.
T Consensus 462 ~p~E~v~i~~l~~~~~~l~~~l~ 484 (490)
T 3mru_A 462 SPDEKVKIDTVQLFWDQMVALLE 484 (490)
T ss_dssp STTCEEEHHHHHHHHHHHHHHHH
T ss_pred CCCccccHHHHHHHHHHHHHHHH
Confidence 99999999999999999999875
No 27
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=9.3e-44 Score=359.65 Aligned_cols=353 Identities=15% Similarity=0.093 Sum_probs=268.8
Q ss_pred HHHhhcCchhHHHHHHHHHHhHhCCCCCCCc------------HHHHHHHHHHHHhCCCCeEecccCceEEEEECCCCCc
Q 014490 39 FLDFAKKPEIFYWMVNIRRKIHENPELGFQE------------FETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPP 106 (423)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~l~~ips~s~~E------------~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~~~~~ 106 (423)
+.++++.++ +++++++++|++|||+|++| .++++||.++|+++|++++.. ...+++++++ .++|
T Consensus 5 ~~~~~~~~~--~~~~~~l~~l~~ips~s~~~~~~~~~p~~~~~~~~~~~l~~~l~~~G~~~~~~-~~~~~~~~~g-~~~~ 80 (470)
T 1lfw_A 5 FKELAEAKK--DAILKDLEELIAIDSSEDLENATEEYPVGKGPVDAMTKFLSFAKRDGFDTENF-ANYAGRVNFG-AGDK 80 (470)
T ss_dssp HHHHHHTTH--HHHHHHHHHHHTSCCBCCGGGCCSSSTTCHHHHHHHHHHHHHHHHTTCEEEEE-TTTEEEEEEC-CCSS
T ss_pred HHHHHHHhH--HHHHHHHHHHcCCCCcCCCccccccCCCcHHHHHHHHHHHHHHHHcCCeEEEe-cCeEEEEEeC-CCCC
Confidence 556667766 89999999999999999876 689999999999999988653 3567888874 3359
Q ss_pred EEEEEEecccccCcCCCCC---cccC-C-CCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Ccc
Q 014490 107 FVALRADMDALAMEESVEW---EHKS-K-VPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGG 177 (423)
Q Consensus 107 ~ill~~H~Dtvp~~~~~~w---~~~~-~-~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~ 177 (423)
+|+|+|||||||.++ +| ||.. . +||++||||+ |++++++|+|+++|++.+..++++|.|+|+++|| |+.
T Consensus 81 ~i~l~~H~D~vp~~~--~w~~~Pf~~~~~~~g~l~grG~~D~K~~~a~~l~a~~~l~~~~~~~~~~i~~i~~~~EE~g~~ 158 (470)
T 1lfw_A 81 RLGIIGHMDVVPAGE--GWTRDPFKMEIDEEGRIYGRGSADDKGPSLTAYYGMLLLKEAGFKPKKKIDFVLGTNEETNWV 158 (470)
T ss_dssp EEEEEEECCBCCCCS--CCSSCTTSCEECTTCEEESTTSSSSHHHHHHHHHHHHHHHHHTCCCSSEEEEEEESCTTTTCH
T ss_pred eEEEEEeecccCCCC--CccCCCcceeEeeCCEEECCCcccChHHHHHHHHHHHHHHHcCCCCCCCEEEEEecCcccCCc
Confidence 999999999999876 67 4554 3 7999999996 7999999999999999888889999999999999 778
Q ss_pred cHHHHHhcCCCcc----cce----eeee--------ccCCCCC-Cce---EEeecCc-----------------------
Q 014490 178 GAKKMLDAGALEN----VEA----IFGL--------HVSSLFP-VGT---VASRPGP----------------------- 214 (423)
Q Consensus 178 Ga~~~~~~~~~~~----~d~----~i~~--------~~~~~~p-~g~---~~~~~g~----------------------- 214 (423)
|++.+++++.... .|. +++. +..+ .+ .|. .....|.
T Consensus 159 G~~~~~~~~~~~~~~~~~D~~~~~~~ge~g~~~~~l~~~~-~~~~g~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~ 237 (470)
T 1lfw_A 159 GIDYYLKHEPTPDIVFSPDAEYPIINGEQGIFTLEFSFKN-DDTKGDYVLDKFKAGIATNVTPQVTRATISGPDLEAVKL 237 (470)
T ss_dssp HHHHHHHHSCCCSEEEESSEESSEEEEECEEEEEEEEECC-CCCCCSBEEEEEEECSBTTBCCSEEEEEEECSCHHHHHH
T ss_pred cHHHHHHhCcCCcEEEEeCCCceEEEeccceEEEEEEEcc-CCcCCCcceeeeecCCcCCcccccceEEecccchHHHHH
Confidence 9999988754311 122 1111 1000 00 010 0001110
Q ss_pred ---------ccCcce-----EEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHH------Hhh---ccc-----------
Q 014490 215 ---------TLAAGG-----FFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQ------HLV---SRE----------- 260 (423)
Q Consensus 215 ---------~~~g~~-----~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~------~~~---~~~----------- 260 (423)
+.+|.. +++|+++|+++|++.|+.|.||+..+++++.+|+ .+. .+.
T Consensus 238 ~~~~~~~~~~~~G~~~~~~~~~~i~v~G~~~Ha~~P~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~ 317 (470)
T 1lfw_A 238 AYESFLADKELDGSFEINDESADIVLIGQGAHASAPQVGKNSATFLALFLDQYAFAGRDKNFLHFLAEVEHEDFYGKKLG 317 (470)
T ss_dssp HHHHHHHHHTCEEEEEEETTEEEEEEECBCCBTTCGGGSBCHHHHHHHHHTTSCBCHHHHHHHHHHHHTTTTCTTSTTTT
T ss_pred HHHHHhhhhccccceeecCCcEEEEEeecccCCCCCccCccHHHHHHHHHHhCCCcchhHHHHHHHHHhcCCCCcccccC
Confidence 123443 8999999999999999999999999999998885 321 111
Q ss_pred ---CC-CCCCceEEEEEEecCCCCccCCCc-EEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCc
Q 014490 261 ---AD-PLDSQVLTVAKFEGGGAFNIIPDS-VTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPV 335 (423)
Q Consensus 261 ---~~-~~~~~t~~v~~i~gg~~~n~iP~~-a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (423)
.+ ..+.+++|++.|++ +|++ |++.+|+|++|.++.+.+.++|++++++ + +++++ ...+|+
T Consensus 318 ~~~~~~~~~~~t~~~g~i~~------~p~~~a~~~~diR~~~~~~~~~i~~~i~~~~~~-----g--~~v~~--~~~~~~ 382 (470)
T 1lfw_A 318 IFHHDDLMGDLASSPSMFDY------EHAGKASLLNNVRYPQGTDPDTMIKQVLDKFSG-----I--LDVTY--NGFEEP 382 (470)
T ss_dssp CCCEETTTEECEEEEEEEEE------ETTSCEEEEEEEEECTTCCHHHHHHHHHHHHTT-----T--EEEEC--SCCBCC
T ss_pred CcccccccccceEEEEEEEE------cCCceEEEEEEEecCCCCCHHHHHHHHHHHhcC-----C--eEEEE--EeCCCc
Confidence 01 12346888888865 5999 9999999999999999999999998764 4 44454 445666
Q ss_pred cc--cCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhhcCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHH
Q 014490 336 TV--NNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYG 413 (423)
Q Consensus 336 ~~--~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~ 413 (423)
+. .|+++++.+++++++.+|.++. ....+|++|++++. |.+. +|+.. ||+...+|++||++++++|.++
T Consensus 383 ~~~~~d~~l~~~~~~a~~~~~g~~~~--~~~~~g~~d~~~~~---~~v~--~G~~~--pg~~~~~H~~~E~i~~~~l~~~ 453 (470)
T 1lfw_A 383 HYVPGSDPMVQTLLKVYEKQTGKPGH--EVVIGGGTYGRLFE---RGVA--FGAQP--ENGPMVMHAANEFMMLDDLILS 453 (470)
T ss_dssp EECCTTCHHHHHHHHHHHHHHCCCCC--EEEESSCCGGGGST---TCEE--CCEEC--TTCCCCTTSTTCEEEHHHHHHH
T ss_pred eeeCCCCHHHHHHHHHHHHHcCCCCc--eeeecCHhHHHhCC---CeEE--ECCCC--CCCCCCCCCCCcceEHHHHHHH
Confidence 53 5788999999999998797653 34677899999885 6543 45544 5656789999999999999999
Q ss_pred HHHHHHHHh
Q 014490 414 AALHASLAT 422 (423)
Q Consensus 414 ~~~~~~~i~ 422 (423)
+++|+.++.
T Consensus 454 ~~~~~~~~~ 462 (470)
T 1lfw_A 454 IAIYAEAIY 462 (470)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998875
No 28
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=100.00 E-value=3.4e-33 Score=261.34 Aligned_cols=245 Identities=15% Similarity=0.156 Sum_probs=185.9
Q ss_pred HHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEec--ccCceEEEEECCCCCcEEEEEEecccccCcCCCCCc-
Q 014490 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP--VAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWE- 126 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~--~~~~nvia~~~~~~~~~ill~~H~Dtvp~~~~~~w~- 126 (423)
+++++++++|++|||+|++|.++++||.++|+++|++++.. ..++|++++++ .++|+|+|.|||||||.++.+.|.
T Consensus 6 ~~~~~~l~~lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~g-~~~~~i~l~~H~D~vp~~~~~~w~~ 84 (268)
T 3t68_A 6 SPVLALAKELISRQSVTPADAGCQDLMIERLKALGFEIESMVFEDTTNFWARRG-TQSPLFVFAGHTDVVPAGPLSQWHT 84 (268)
T ss_dssp CHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHHTTCEECCCEETTEEC-CEEEC-SSSCEEEEEEECCBCCCCCGGGCSS
T ss_pred HHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHCCCeEEEEecCCccEEEEEeC-CCCCeEEEEccccccCCCCcccCCC
Confidence 57899999999999999999999999999999999987653 35689999994 346999999999999999888895
Q ss_pred --cc-CCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Cc-ccHHHHHhcC--CCcccceeee
Q 014490 127 --HK-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG-GGAKKMLDAG--ALENVEAIFG 196 (423)
Q Consensus 127 --~~-~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~-~Ga~~~~~~~--~~~~~d~~i~ 196 (423)
|. .+++|++||||+ |++++++|.|+++|++.+..++++|.|+|+++|| |+ .|++.+++.. ...++|++++
T Consensus 85 ~pf~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~d~~i~ 164 (268)
T 3t68_A 85 PPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIAEHPDHQGSIGFLITSDEEGPFINGTVRVVETLMARNELIDMCIV 164 (268)
T ss_dssp CTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCTTSSSCCHHHHHHHHHHHTTCCCCEEEE
T ss_pred CCCccEEECCEEEecCcccchHHHHHHHHHHHHHHHhCCCCCCcEEEEEEeCCccCcccCHHHHHHHHHhcCCCCCEEEE
Confidence 43 467899999998 7999999999999998777788999999999999 55 4999988642 1235677776
Q ss_pred eccCCCCCCceEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEec
Q 014490 197 LHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEG 276 (423)
Q Consensus 197 ~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~g 276 (423)
.++......+. .+.+ |+.+.
T Consensus 165 ~ept~~~~~~~-------------~i~~---g~~G~-------------------------------------------- 184 (268)
T 3t68_A 165 GEPSSTLAVGD-------------VVKN---GRRGG-------------------------------------------- 184 (268)
T ss_dssp CSCCBSSSTTS-------------EEEE---CCGGG--------------------------------------------
T ss_pred eCCCCCccCCc-------------eeEE---ecCCC--------------------------------------------
Confidence 54322111010 1111 11110
Q ss_pred CCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCccccCHHHHHHHHHHHHHhcCC
Q 014490 277 GGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGV 356 (423)
Q Consensus 277 g~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~g~ 356 (423)
|...+++++++.+++++++..|.
T Consensus 185 ---------------------------------------------------------p~~~~~~~l~~~l~~a~~~~~gi 207 (268)
T 3t68_A 185 ---------------------------------------------------------GFLTDTGELLAAVVAAVEEVNHQ 207 (268)
T ss_dssp ---------------------------------------------------------GTSCCCCHHHHHHHHHHHHHHSS
T ss_pred ---------------------------------------------------------cccCCchHHHHHHHHHHHHHhCC
Confidence 11112346899999999885588
Q ss_pred cccccCCCCCCCchHHHHHhh-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 357 QNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 357 ~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
++.. ...+|++|++++.+. +|++.+ |+.. ...|+++|+++++++.++++++..++.
T Consensus 208 ~~~~--~~sgggtD~~~~~~~g~p~~~~--~~~~------~~~Hs~~E~v~~~d~~~~~~vl~~~l~ 264 (268)
T 3t68_A 208 APAL--LTTGGTSDGRFIAQMGAQVVEL--GPVN------ATIHKVNECVRIADLEKLTDMYQKTLN 264 (268)
T ss_dssp CCEE--ESSCCCHHHHHHHHHTCEEEEC--CSBC------TTTTSTTCEEEHHHHHHHHHHHHHHHH
T ss_pred CcEE--ecCccccHHHHHHhcCCCEEEE--eeCC------CCCCCccccccHHHHHHHHHHHHHHHH
Confidence 7642 356789999999987 555444 4322 236999999999999999999999875
No 29
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=100.00 E-value=5.3e-32 Score=253.27 Aligned_cols=246 Identities=17% Similarity=0.210 Sum_probs=183.5
Q ss_pred HHHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEec--ccCceEEEEECCCCCcEEEEEEecccccCcCCCCCc
Q 014490 49 FYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP--VAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWE 126 (423)
Q Consensus 49 ~~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~--~~~~nvia~~~~~~~~~ill~~H~Dtvp~~~~~~w~ 126 (423)
++++++++++|++|||+|++|.++++||.++|+++|++++.. ..++|++++++ .++|+|+|.||+||||.++.+.|.
T Consensus 5 ~~~~~~~l~~lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~g-~~~~~i~l~~H~D~vp~~~~~~w~ 83 (269)
T 4h2k_A 5 KEKVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWAKHG-TSEPVIAFAGHTDVVPTGDENQWS 83 (269)
T ss_dssp HHHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHTTTCEEEECCBTTBCEEEEEEC-SSSCEEEEEEECCBCCCCCGGGCS
T ss_pred HHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHcCCeEEEEEcCCceEEEEEeC-CCCCEEEEEeeecccCCCCccccc
Confidence 378999999999999999999999999999999999998763 35789999984 346999999999999999888895
Q ss_pred c---c-CCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Cc-ccHHHHHhcC--CCcccceee
Q 014490 127 H---K-SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG-GGAKKMLDAG--ALENVEAIF 195 (423)
Q Consensus 127 ~---~-~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~-~Ga~~~~~~~--~~~~~d~~i 195 (423)
. . .++||++||||+ |++++++|.|+++|++.+..++++|.|+|+++|| ++ .|++.+++.. ...++|+++
T Consensus 84 ~~pf~~~~~~g~~~grG~~D~k~g~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~d~~i 163 (269)
T 4h2k_A 84 SPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVETLMARDEKITYCM 163 (269)
T ss_dssp SCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSCCTTSHHHHHHHHHHTTCCCCEEE
T ss_pred CCCCCeEEECCEEEeCCcccChHHHHHHHHHHHHHHHhCCCCCccEEEEEEeccccCcccCHHHHHHHHHhcCCCCCEEE
Confidence 4 3 466899999998 7999999999999998777788999999999999 55 4999987632 113467777
Q ss_pred eeccCCCCCCceEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEe
Q 014490 196 GLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFE 275 (423)
Q Consensus 196 ~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~ 275 (423)
+.++......+. . +. .|+- |.
T Consensus 164 ~~Ept~~~~~~~-------------~--i~-~g~~--------G~----------------------------------- 184 (269)
T 4h2k_A 164 VGEPSSAKNLGD-------------V--VK-NGRR--------GG----------------------------------- 184 (269)
T ss_dssp ECCCCBSSSTTS-------------E--EE-CSCT--------TC-----------------------------------
T ss_pred EECCCCCCcCCc-------------e--eE-Eecc--------cc-----------------------------------
Confidence 654321111010 1 11 1111 10
Q ss_pred cCCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCccccCHHHHHHHHHHHHHhcC
Q 014490 276 GGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLG 355 (423)
Q Consensus 276 gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~g 355 (423)
| . ...++++++.+.+++++..|
T Consensus 185 --------------------------------------------G------~--------~~~~~~l~~~l~~aa~~~~g 206 (269)
T 4h2k_A 185 --------------------------------------------G------F--------LTKPGKLLDSITSAIEETIG 206 (269)
T ss_dssp --------------------------------------------C--------------------HHHHHHHHHHHHHHS
T ss_pred --------------------------------------------c------c--------cCCCcHHHHHHHHHHHHHhC
Confidence 0 0 01125688999889888448
Q ss_pred CcccccCCCCCCCchHHHHHhh-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 356 VQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 356 ~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
.++.. ...+|++|++++... +|++.+ ++.. ...|+++|+++++++.+++++|..+++
T Consensus 207 i~~~~--~~~gggtDa~~~~~~g~p~~~~--~~~~------~~~Hs~~E~v~~~d~~~~~~ll~~~l~ 264 (269)
T 4h2k_A 207 ITPKA--ETGGGTSDGRFIALMGAEVVEF--GPLN------STIHKVNECVSVEDLGKCGEIYHKMLV 264 (269)
T ss_dssp CCCEE--ECC--CHHHHHHHTTTCEEEEC--CSBC------TTTTSTTCEEEHHHHHHHHHHHHHHHH
T ss_pred CCCEE--ecCCCCchHHHHHhhCCCEEEE--EeCC------CCCcCCcccccHHHHHHHHHHHHHHHH
Confidence 87643 467789999999877 555554 4322 347999999999999999999999875
No 30
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=99.94 E-value=1.2e-26 Score=206.96 Aligned_cols=170 Identities=15% Similarity=0.118 Sum_probs=134.5
Q ss_pred HHHHHHHHHhHhCCCCCC--CcHHHHHHHHHHHHhCCCCeEecc---cCceEEEEECCC-C-CcEEEEEEecccccCcCC
Q 014490 50 YWMVNIRRKIHENPELGF--QEFETSKLIRAELDQMGIPYKFPV---AVTGVVGYIGTG-Q-PPFVALRADMDALAMEES 122 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~--~E~~~~~~l~~~l~~~g~~~~~~~---~~~nvia~~~~~-~-~~~ill~~H~Dtvp~~~~ 122 (423)
+++++++++|++|||+|+ +|.++++||.++|+++|++++... +++|+++++++. + +|+|+|.||+||||.++
T Consensus 10 ~~~~~~l~~lv~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~~~g~~~~i~~~~g~~~~~~~ill~aH~DtVp~~~- 88 (198)
T 1q7l_A 10 HPSVTLFRQYLRIRTVQPKPDYGAAVAFFEETARQLGLGCQKVEVAPGYVVTVLTWPGTNPTLSSILLNSHTDVVPVFK- 88 (198)
T ss_dssp CHHHHHHHHHHTSCCBTTSCCHHHHHHHHHHHHHHHTCEEEEEEEETTEEEEEEEECCSSTTSCEEEEEEECCBCCCCG-
T ss_pred HHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHHHHCCCeEEEEEcCCCCeEEEEEEccCCCCCCeEEEEeeecccCCCc-
Confidence 568999999999999998 689999999999999999887642 567999999654 2 48999999999999875
Q ss_pred CCCc---ccC-C-CCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-C-cccHHHHHhcCCCc--c
Q 014490 123 VEWE---HKS-K-VPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-G-GGGAKKMLDAGALE--N 190 (423)
Q Consensus 123 ~~w~---~~~-~-~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g-~~Ga~~~~~~~~~~--~ 190 (423)
..|. |.. + +||++||||+ |++++++|+|+++|++.+..++++|.|+|+++|| | ..|++++++++.+. +
T Consensus 89 ~~w~~~pf~~~~~~~g~l~GrGa~D~K~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~ 168 (198)
T 1q7l_A 89 EHWSHDPFEAFKDSEGYIYARGAQDMKCVSIQYLEAVRRLKVEGHRFPRTIHMTFVPDEEVGGHQGMELFVQRPEFHALR 168 (198)
T ss_dssp GGCSSCTTTCCBCTTSEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSSCEEEEEESCGGGTSTTTHHHHTTSHHHHTTC
T ss_pred ccCccCCCeeeEccCCEEEeCcchhchHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcccccCccccHHHHHHhHHhccCC
Confidence 4674 432 2 5899999996 7999999999999999887889999999999999 5 48999998764322 3
Q ss_pred cceeeeeccCCCCCCceEEeecCcccCcceEEEE
Q 014490 191 VEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEA 224 (423)
Q Consensus 191 ~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i 224 (423)
+++++ +...++|++.... ..+++|..|++|
T Consensus 169 ~~~~i--d~g~~ept~~~~v--~~~~kG~~~~~v 198 (198)
T 1q7l_A 169 AGFAL--DEGIANPTDAFTV--FYSERSPWWVRV 198 (198)
T ss_dssp EEEEE--ECCCCCSSSSEEE--EECCSSCGGGCC
T ss_pred cCEEE--ecCccCCCCCceE--EEEccEEEEEEC
Confidence 44444 3334677764322 245678887653
No 31
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.93 E-value=1.2e-25 Score=217.29 Aligned_cols=244 Identities=12% Similarity=0.081 Sum_probs=161.4
Q ss_pred HHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEecccCceEEEEECCC-CCcEEEEEEecccccCc-------------
Q 014490 55 IRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG-QPPFVALRADMDALAME------------- 120 (423)
Q Consensus 55 ~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~~-~~~~ill~~H~Dtvp~~------------- 120 (423)
++++|+++||+|++|.++++||.++|+++|++++.+ ...|+++++.+. ++|+|+|.||||+||.-
T Consensus 3 ~l~~L~~~~s~sg~e~~~~~~l~~~l~~~g~~~~~d-~~gnlia~~~g~~~~~~v~l~aH~D~v~~~v~~i~~~G~l~~~ 81 (340)
T 2fvg_A 3 YLKELSMMPGVSGDEGKVRDFIKSKIEGLVDNLYTD-VLGNLIALKRGRDSSKKLLVSAHMDEVGFVVSKIEKDGKVSFL 81 (340)
T ss_dssp CHHHHHHSCCBTTCCHHHHHHHHHHHGGGSSEEEEC-TTSCEEEEECCSEEEEEEEEEEECCBCEEEEEEECTTSCEEEE
T ss_pred HHHHHHcCCCCCCchHHHHHHHHHHHHhhCCEEEEe-CCCcEEEEecCCCCCceEEEEeccCcCcEEEEEECCCCEEEEE
Confidence 478899999999999999999999999999988764 456999998654 34899999999999830
Q ss_pred CCCCCccc---C------------------------------------------------CC-C-------------Ccc
Q 014490 121 ESVEWEHK---S------------------------------------------------KV-P-------------GKM 135 (423)
Q Consensus 121 ~~~~w~~~---~------------------------------------------------~~-~-------------g~~ 135 (423)
...+|..+ . ++ + |++
T Consensus 82 ~~Gg~~~~~~~~~~v~v~~~~g~i~~~~~h~~~~~~~~~~~~~~l~id~g~~s~~e~~~~i~~gd~v~~~~~~~~~~~~i 161 (340)
T 2fvg_A 82 PVGGVDPRILPGKVVQVKNLKGVIGYRPIHLQRDEENTPPRFENLRIDFGFSSADEAKKYVSIGDYVSFVSDYIEKNGRA 161 (340)
T ss_dssp EESCCCGGGCTTCEEEETTEEEEEEECC-----------CCSTTEEEECSCSSHHHHHTTCCTTCEEEECCCCEEETTEE
T ss_pred eeCCcccccccCCEEEECcEEEEEcCCCccccchhhccCCCcccEEEEeCCCCHHHHHhhCCCCCEEEEccCceeecCEE
Confidence 11245322 1 12 4 899
Q ss_pred ccCCc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHhcCCCcccceeeeeccCCCCCCceEEeec
Q 014490 136 HACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRP 212 (423)
Q Consensus 136 ~grG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~~~~~~~~~~d~~i~~~~~~~~p~g~~~~~~ 212 (423)
|||.. |++++++|.|++.|+ .++++|.|+|+++|| |+.|++.+.+. ...|++++.++ +..
T Consensus 162 ~gra~D~k~g~a~~l~a~~~l~----~~~~~i~~~~~~~EE~G~~G~~~~~~~---~~~~~~i~~d~-----~~~----- 224 (340)
T 2fvg_A 162 VGKAFDDRAGCSVLIDVLESGV----SPAYDTYFVFTVQEETGLRGSAVVVEQ---LKPTCAIVVET-----TTA----- 224 (340)
T ss_dssp EESCHHHHHHHHHHHHHHHTCC----CCSEEEEEEEECCCC-----CHHHHHH---HCCSEEEEEEE-----EEE-----
T ss_pred eeccCccHHHHHHHHHHHHHhh----ccCCcEEEEEEcccccchhhhHHHhhc---cCCCEEEEEec-----ccC-----
Confidence 99944 799999999999886 478999999999999 88999988763 13456665321 100
Q ss_pred CcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEecCCCCccCCCcEEEEEE
Q 014490 213 GPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGT 292 (423)
Q Consensus 213 g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gg~~~n~iP~~a~~~~d 292 (423)
+ ++.|++.|++.|+.|.|++..+ .+. +.
T Consensus 225 -----~------~~~G~~~h~~~~~~G~g~~i~~--------------~~~-------------~~-------------- 252 (340)
T 2fvg_A 225 -----G------DNPELEERKWATHLGDGPAITF--------------YHR-------------GY-------------- 252 (340)
T ss_dssp -----C------SCSTTCCSSSSCCTTSCCEECS--------------CCS-------------SS--------------
T ss_pred -----C------CCCCCccccCCcccCCCcEEEE--------------eCC-------------CC--------------
Confidence 0 4578888988898888854110 000 00
Q ss_pred EecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCccccCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHH
Q 014490 293 FRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFS 372 (423)
Q Consensus 293 ~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~ 372 (423)
..+..+.+.+++++++. |.+.... ...+|+||++
T Consensus 253 --------------------------------------------~~~~~l~~~l~~~a~~~-gi~~~~~-~~~~ggtDa~ 286 (340)
T 2fvg_A 253 --------------------------------------------VIPKEIFQTIVDTAKNN-DIPFQMK-RRTAGGTDAG 286 (340)
T ss_dssp --------------------------------------------CCCHHHHHHHHHHHHHT-TCCCEEC-CCC-------
T ss_pred --------------------------------------------CCCHHHHHHHHHHHHHc-CCCeEEE-ecCCCCccHH
Confidence 00122444444444444 5443211 2467889999
Q ss_pred HHHh--h-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 373 FFAE--A-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 373 ~~~~--~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
.|.. . +|++++++|.. ..|+++|+++++++.+++++|..++.
T Consensus 287 ~~~~~~~GiP~v~~g~~~~--------~~Hs~~E~v~~~dl~~~~~ll~~~~~ 331 (340)
T 2fvg_A 287 RYARTAYGVPAGVISTPAR--------YIHSPNSIIDLNDYENTKKLIKVLVE 331 (340)
T ss_dssp ------CCSCEEEEEEEEE--------ESSTTCEEEEHHHHHHHHHHHHHHHH
T ss_pred HHHhhCCCCcEEEeccccc--------ccCChhhcccHHHHHHHHHHHHHHHH
Confidence 9986 4 99988776532 28999999999999999999998875
No 32
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=99.91 E-value=1.3e-23 Score=205.53 Aligned_cols=251 Identities=13% Similarity=0.127 Sum_probs=178.0
Q ss_pred HHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEecccCceEEEEECCC-CCcEEEEEEecccccC---------
Q 014490 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG-QPPFVALRADMDALAM--------- 119 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~~-~~~~ill~~H~Dtvp~--------- 119 (423)
+++++++++|+++||+|++|.++++||.++|+++|++++.+ ...|++|++.++ ++|+|+|.||||+||.
T Consensus 7 ~~~~~~l~~L~~~~s~sg~e~~~~~~l~~~l~~~g~~~~~d-~~gnlia~~~g~~~~~~vll~aH~D~v~~~v~~i~~~G 85 (373)
T 1vhe_A 7 DETLTMLKDLTDAKGIPGNEREVRQVMKSYIEPFADEVTTD-RLGSLIAKKTGAENGPKIMIAGHLDEVGFMVTQITDKG 85 (373)
T ss_dssp CHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHGGGCSEEEEC-TTCCEEEEEESSTTSCEEEEEEECCCCEEEEEEECTTS
T ss_pred HHHHHHHHHHHcCCCCCCchHHHHHHHHHHHHhhCCEEEEc-CCCcEEEEecCCCCCceEEEEecCCcCCEEEEEECCCC
Confidence 46889999999999999999999999999999999998764 467999988554 4589999999999982
Q ss_pred -------cC---------------CC-------CCccc--C------------------------------C--------
Q 014490 120 -------EE---------------SV-------EWEHK--S------------------------------K-------- 130 (423)
Q Consensus 120 -------~~---------------~~-------~w~~~--~------------------------------~-------- 130 (423)
+. .. .|..+ . .
T Consensus 86 ~l~~~~~Gg~~~~~~~~~~v~v~~~~g~~~g~i~~~~~h~~~~~~~~~~~~~~~l~id~g~~s~~~~~~~gi~~Gd~v~~ 165 (373)
T 1vhe_A 86 FIRFQTVGGWWAQVMLAQRVTIVTKKGEITGVIGSKPPHILSPEARKKSVEIKDMFIDIGASSREEALEWGVLPGDMIVP 165 (373)
T ss_dssp CEEEEEESCCCGGGTTTCEEEEEETTEEEEEEEECCCGGGSCTTTTTSCCCGGGCEEECSCSSHHHHHHTTCCTTCEEEE
T ss_pred eEEEEEeCCcchhhccCCEEEEEeCCCcEEEEEcCCCcccCchhhccCCCChhHeEEEecCCCHHHHHHcCCCCCCEEEE
Confidence 10 00 13200 0 1
Q ss_pred --------CCCccccCCc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHhcCCCcccceeeeecc
Q 014490 131 --------VPGKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHV 199 (423)
Q Consensus 131 --------~~g~~~grG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~~~~~~~~~~d~~i~~~~ 199 (423)
++|++|||+. |++++++|.|++.|++.+ ++++|.|+|+++|| |+.|++.+... + ..|+++++++
T Consensus 166 ~~~~~~~~~~~~i~gr~~D~k~g~a~~l~a~~~l~~~~--~~~~v~~~~~~~EE~G~~G~~~~~~~--~-~~d~~i~~d~ 240 (373)
T 1vhe_A 166 HFEFTVMNNEKFLLAKAWDNRIGCAIAIDVLRNLQNTD--HPNIVYGVGTVQEEVGLRGAKTAAHT--I-QPDIAFGVDV 240 (373)
T ss_dssp CCCCEECSSTTEEEETTHHHHHHHHHHHHHHHHHHTSC--CSSEEEEEEESCCTTTSHHHHHHHHH--H-CCSEEEEEEE
T ss_pred ccccEEecCCCeEEeccCccHHHHHHHHHHHHHHhhcC--CCceEEEEEECCcccChhhHHHHhcc--c-CCCEEEEEec
Confidence 2689999976 799999999999998764 67999999999999 88999988532 1 3466665432
Q ss_pred CCCCCCceEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEecCCC
Q 014490 200 SSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGA 279 (423)
Q Consensus 200 ~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gg~~ 279 (423)
.. .+. ..|. .|+.+. ..++. |
T Consensus 241 ~~---~~~--------~~g~---------------~~~~~~---------------------~~lg~----------G-- 261 (373)
T 1vhe_A 241 GI---AGD--------TPGI---------------SEKEAQ---------------------SKMGK----------G-- 261 (373)
T ss_dssp EE---CCC--------STTC---------------CTTTCC---------------------CCTTS----------C--
T ss_pred cc---cCC--------CCCC---------------cccccc---------------------cccCC----------C--
Confidence 11 000 0111 111100 00000 1
Q ss_pred CccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCccccCHHHHHHHHHHHHHhcCCccc
Q 014490 280 FNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNI 359 (423)
Q Consensus 280 ~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~g~~~~ 359 (423)
| .+.+.. ++...++++++.+++++++. |.++.
T Consensus 262 ----~-------------------------------------~i~~~~------~~~~~~~~l~~~l~~~a~~~-gi~~~ 293 (373)
T 1vhe_A 262 ----P-------------------------------------QIIVYD------ASMVSHKGLRDAVVATAEEA-GIPYQ 293 (373)
T ss_dssp ----C-------------------------------------EEEEEE------TTEECCHHHHHHHHHHHHHH-TCCCE
T ss_pred ----c-------------------------------------eEEEeC------CCCCCCHHHHHHHHHHHHHc-CCCeE
Confidence 1 011110 12456788999999999888 87653
Q ss_pred ccCCCCCCCchHHHH--Hhh-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 360 KENRPLMGTEDFSFF--AEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 360 ~~~~~~~g~tD~~~~--~~~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
.. ...+|+||++.| ... +|++++++|. ...|+++|+++++++.+++++++.++.
T Consensus 294 ~~-~~~~ggtDa~~~~~~~~GiPtv~lg~~~--------~~~Hs~~E~v~~~dl~~~~~ll~~~l~ 350 (373)
T 1vhe_A 294 FD-AIAGGGTDSGAIHLTANGVPALSITIAT--------RYIHTHAAMLHRDDYENAVKLITEVIK 350 (373)
T ss_dssp EE-EETTCCCTHHHHTTSTTCCCEEEEEEEE--------BSTTSSCEEEEHHHHHHHHHHHHHHHH
T ss_pred Ee-cCCCCCccHHHHHHhCCCCcEEEEcccc--------ccCCChhheecHHHHHHHHHHHHHHHH
Confidence 20 345788999999 555 9998877653 238999999999999999999998875
No 33
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=99.91 E-value=1.9e-23 Score=201.26 Aligned_cols=238 Identities=20% Similarity=0.198 Sum_probs=175.0
Q ss_pred HHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEecccCceEEEEECCCCCcEEEEEEeccccc-------------
Q 014490 52 MVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALA------------- 118 (423)
Q Consensus 52 ~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~~~~~~ill~~H~Dtvp------------- 118 (423)
+++++++|+++||+|++|.++++||.++|+++|+ ++. +..+|++|+++++ +|+|+|.||+|+|+
T Consensus 4 ~~~~l~~l~~~~s~sg~e~~~~~~l~~~l~~~g~-~~~-d~~gnlia~~~~~-~~~i~l~aH~D~v~~~v~~i~~~G~l~ 80 (332)
T 2wyr_A 4 MIEKLKKFTQIPGISGYEERIREEIIREIKDFAD-YKV-DAIGNLIVELGEG-EERILFMAHMDEIGLLITGITDEGKLR 80 (332)
T ss_dssp HHHHHHHHHTSCCBTTCCHHHHHHHHHHHTTTCC-CEE-CTTCCEEEEEESS-SEEEEEEEECCBCEEEEEEECTTSCEE
T ss_pred HHHHHHHHHcCCCCCCcHHHHHHHHHHHHhhcCc-EEE-cCCCeEEEEecCC-CceEEEEeccCcccEEEEEECCCCeEE
Confidence 6788999999999999999999999999999999 664 5678999998653 58999999999994
Q ss_pred ---CcCCCCCc---------------------------------------------------------------------
Q 014490 119 ---MEESVEWE--------------------------------------------------------------------- 126 (423)
Q Consensus 119 ---~~~~~~w~--------------------------------------------------------------------- 126 (423)
.+. |.
T Consensus 81 ~~~~Gg---~~~~~~~~~~v~v~~~~g~~~g~i~~~~~h~~~~~~~~~~~~~~~~id~g~~~~~~~~~~i~~Gd~~~~~~ 157 (332)
T 2wyr_A 81 FRKVGG---IDDRLLYGRHVNVVTEKGILDGVIGATPPHLSLERDKSVIPWYDLVIDIGAESKEEALELVKPLDFAVFKK 157 (332)
T ss_dssp EEEESC---CCGGGTTTEEEEEECSSCEEEEEECCCCTTC-----CCCCCGGGCCBBCSCSSHHHHHHHCCTTCEEEECC
T ss_pred EEecCC---cChhhccCCEEEEEcCCCCEEEEEcCCCcccChhhhccCCChHHEEEEeCCCCHHHHHhhCCCCCEEEEcc
Confidence 442 21
Q ss_pred -ccCCCCCccccCCc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHhcCCCcccceeeeeccCCC
Q 014490 127 -HKSKVPGKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSL 202 (423)
Q Consensus 127 -~~~~~~g~~~grG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~~~~~~~~~~d~~i~~~~~~~ 202 (423)
+....++++|||.. |++++++|.|++.|++.+ ++++|.|+|+++|| |+.|++.+.+. + ..|+++++++..
T Consensus 158 ~~~~~~~~~i~gra~D~k~g~a~~l~a~~~l~~~~--~~~~i~~~~~~~EE~G~~G~~~~~~~--~-~~~~~i~~d~~~- 231 (332)
T 2wyr_A 158 HFSVLNGKYVSTRGLDDRFGVVALIEAIKDLVDHE--LEGKVIFAFTVQEEVGLKGAKFLANH--Y-YPQYAFAIDSFA- 231 (332)
T ss_dssp CCEEETTTEEECTTHHHHHHHHHHHHHHHTTTTSC--CSSEEEEEEESCGGGTSHHHHHHTTT--C-CCSEEEEECCEE-
T ss_pred ccEEecCCeEEcccCCcHHHHHHHHHHHHHHhhcC--CCceEEEEEECccccCcchHHHHhcc--c-CCCEEEEEeccc-
Confidence 11125789999944 799999999999998765 67999999999999 88999988642 2 356666643211
Q ss_pred CCCceEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEecCCCCcc
Q 014490 203 FPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNI 282 (423)
Q Consensus 203 ~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gg~~~n~ 282 (423)
... .+ | | .+ .++. |..
T Consensus 232 -~~~----~p-----~---------~------~~--------------------------~lg~----------G~~--- 247 (332)
T 2wyr_A 232 -CCS----PL-----T---------G------DV--------------------------KLGK----------GPV--- 247 (332)
T ss_dssp -CCS----GG-----G---------T------TC--------------------------CTTS----------CCE---
T ss_pred -ccC----CC-----C---------C------ce--------------------------eeCC----------CCE---
Confidence 000 01 1 0 00 0000 100
Q ss_pred CCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCccccCHHHHHHHHHHHHHhcCCcccccC
Q 014490 283 IPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKEN 362 (423)
Q Consensus 283 iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~g~~~~~~~ 362 (423)
+|. .. . ....++++++.+++++++. |.++. .
T Consensus 248 ----------i~~------------------------------~d--~----~~~~~~~l~~~l~~~~~~~-gi~~~--~ 278 (332)
T 2wyr_A 248 ----------IRA------------------------------VD--N----SAIYSRDLARKVWSIAEKN-GIEIQ--I 278 (332)
T ss_dssp ----------EEE------------------------------EC--S----SCBCCHHHHHHHHHHHHHT-TCCCE--E
T ss_pred ----------EEE------------------------------cC--C----CCCCCHHHHHHHHHHHHHc-CCCeE--E
Confidence 010 00 1 2456788999999999987 87653 2
Q ss_pred CCCCCCchHHHHHhhcCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 363 RPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 363 ~~~~g~tD~~~~~~~ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
...+|+||++.|...+|++++++|. ...|+++|+++++++.++++++..++.
T Consensus 279 ~~~~ggtDa~~~~~GiPtv~lg~~~--------~~~Hs~~E~v~~~dl~~~~~ll~~~~~ 330 (332)
T 2wyr_A 279 GVTGGGTDASAFQDRSKTLALSVPI--------KYLHSEVETLHLNDLEKLVKLIEALAF 330 (332)
T ss_dssp EECSSCCGGGGGTTTSEEEEEECEE--------BSCSSTTCEEEHHHHHHHHHHHHHHHH
T ss_pred ecCCCCchHHHHHcCCCEEEEcCCc--------CCCCChhhcccHHHHHHHHHHHHHHHH
Confidence 3456889999987778988776542 248999999999999999999999875
No 34
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=99.91 E-value=1.8e-27 Score=228.76 Aligned_cols=320 Identities=13% Similarity=-0.003 Sum_probs=176.5
Q ss_pred HHHHHHhHhCCCCCCCcH-HHHHHHHHHHHhCCCCeEecccCceEEEEECCCCCcEEEEEEecccccCcCCCCCcccCCC
Q 014490 53 VNIRRKIHENPELGFQEF-ETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWEHKSKV 131 (423)
Q Consensus 53 ~~~~~~l~~ips~s~~E~-~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~~~~~~ill~~H~Dtvp~~~~~~w~~~~~~ 131 (423)
+++|++|++|||+|++|. ++++||.++|+++|++++.+ ..+||+|+++++ +|+|+|.|||||||..... ...
T Consensus 12 ~elL~~Lv~ipS~sg~E~~~v~~~l~~~l~~~G~~v~~D-~~GNlia~~~g~-~p~lll~~H~Dtvp~~v~~-----~~~ 84 (354)
T 2wzn_A 12 WKLMQEIIEAPGVSGYEHLGIRDIVVDVLKEVADEVKVD-KLGNVIAHFKGS-SPRIMVAAHMDKIGVMVNH-----IDK 84 (354)
T ss_dssp HHHHHHHHHSCCBTTCGGGTHHHHHHHHHHTTSSEEEEC-TTCCEEEEECCS-SSEEEEEEECCBCEEEEEE-----ECT
T ss_pred HHHHHHHhcCCCCCcchHHHHHHHHHHHHHHcCCEEEEe-CCCeEEEEECCC-CceEEEEeccccCCCcCCe-----eec
Confidence 478999999999999885 68999999999999998764 456999999865 4999999999999965422 234
Q ss_pred CCccccCCc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHhcCCCcccceeeeeccCCCCCCceE
Q 014490 132 PGKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTV 208 (423)
Q Consensus 132 ~g~~~grG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~~~~~~~~~~d~~i~~~~~~~~p~g~~ 208 (423)
+|.+++++. +.+.++...++..+.+.+ .+...+.++++.+|| +..|++.+..........+...... ...+.
T Consensus 85 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~g~~~~~~~---~~~~~- 159 (354)
T 2wzn_A 85 DGYLHIVPIGGVLPETLVAQRIRFFTEKG-ERYGVVGVLPPHLRRGQEDKGSKIDWDQIVVDVGASSKEEA---EEMGF- 159 (354)
T ss_dssp TSCEEEEEESSCCGGGGTTCEEEEEETTE-EEEEEECCCCGGGC---------CCGGGCCEECSCSSHHHH---HHTTC-
T ss_pred CCceeeccCCCccHHHHHHHHHHHhhccC-CccceEEEeeeeeEecccccccchhhhhhhhhhcccchhhh---hcccc-
Confidence 577766554 222333333333333333 356778888899999 6667766644322211111111000 00000
Q ss_pred EeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhcccCCCCCCceEEEE-EEec-----CCCCcc
Q 014490 209 ASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVA-KFEG-----GGAFNI 282 (423)
Q Consensus 209 ~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~-~i~g-----g~~~n~ 282 (423)
.....+.....+.+.+...|++.+..+.+++..+..++.+|.... .. ...... .... +...|.
T Consensus 160 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~----~~~~~~~~~~~g~~~~~~~~~~ 228 (354)
T 2wzn_A 160 ----RVGTVGEFAPNFTRLNEHRFATPYLDDRICLYAMIEAARQLGDHE---AD----IYIVGSVQEEVGLRGARVASYA 228 (354)
T ss_dssp ----CTTCEEEECCCCEECSSSEEECTTHHHHHHHHHHHHHHHHCCCCS---SE----EEEEEESCGGGTSHHHHHHHHH
T ss_pred ----ccceeeeeeeeeEeecccccccccccccchhhhHHHHHHHHHhcc---cc----ccccccceeeeeeecccccccc
Confidence 111123445556666777777766544455554444444432221 00 111111 1111 234566
Q ss_pred CCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCccccCHHHHHHHHHH-HHHhcCCccccc
Q 014490 283 IPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKV-AADMLGVQNIKE 361 (423)
Q Consensus 283 iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~-~~~~~g~~~~~~ 361 (423)
++..+....+.+........ .......+....... . ...+.......... .....+..+ .
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~--~ 289 (354)
T 2wzn_A 229 INPEVGIAMDVTFAKQPHDK----------GKIVPELGKGPVMDV----G---PNINPKLRAFADEVAKKYEIPLQV--E 289 (354)
T ss_dssp HCCSEEEEEEEEECCCTTST----------TCCCCCTTSCCEEEE----S---TTSCHHHHHHHHHHHHHTTCCCEE--E
T ss_pred cccccceeeeeeeccccchh----------hhhheeecccccccc----c---cccCcchhhhhHHHHHHhcCCCce--E
Confidence 66667777776655432210 000000011111111 1 11122222222222 222223333 4
Q ss_pred CCCCCCCchHHHHHh--h-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 362 NRPLMGTEDFSFFAE--A-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 362 ~~~~~g~tD~~~~~~--~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
....+|+||++++.. . +|++.+|+|. ..+|++||+++++++.+++++|..+++
T Consensus 290 ~~~~~ggTDa~~~~~~~~Giptv~~G~g~--------~~~Ht~~E~v~i~dl~~~~~ll~~~i~ 345 (354)
T 2wzn_A 290 PSPRPTGTDANVMQINKEGVATAVLSIPI--------RYMHSQVELADARDVDNTIKLAKALLE 345 (354)
T ss_dssp ECCSCCSSHHHHHHTSTTCCEEEEEEEEE--------BSTTSTTCEEEHHHHHHHHHHHHHHHH
T ss_pred EEecccccHHHHHHHhcCCCCEEEECccc--------CCCCcccEEEEHHHHHHHHHHHHHHHH
Confidence 457789999998753 3 8998887663 238999999999999999999999986
No 35
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=99.89 E-value=1.8e-22 Score=195.59 Aligned_cols=240 Identities=15% Similarity=0.122 Sum_probs=163.9
Q ss_pred HHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEecccCceEEEEECCC-CCcEEEEEEecccc-----------
Q 014490 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG-QPPFVALRADMDAL----------- 117 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~~-~~~~ill~~H~Dtv----------- 117 (423)
+++++++++|++|||+|++|.++++||.++|+++|++++.+ ...|++|+++++ .+|+|+|.||+|||
T Consensus 6 ~~~~~~l~~lv~i~s~s~~e~~~~~~l~~~l~~~g~~~~~d-~~gnl~a~~~g~~~~~~ill~~H~Dtv~~~v~~i~~~G 84 (349)
T 2gre_A 6 KETMELIKELVSIPSPSGNTAKIINFIENYVSEWNVETKRN-NKGALILTVKGKNDAQHRLLTAHVDTLGAMVKEIKPDG 84 (349)
T ss_dssp HHHHHHHHHHHTSCCBTTCCHHHHHHHHHHTTTSSSEEEEC-SSSCEEEEECCSEEEEEEEEEEECCBCEEEEEEECTTS
T ss_pred HHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHhCCEEEEe-cCCcEEEEecCCCCCceEEEEecccccceeEEEECCCC
Confidence 67899999999999999999999999999999999998764 567999999654 34899999999999
Q ss_pred -----cCcCCCCCccc----------------------------------------------------------------
Q 014490 118 -----AMEESVEWEHK---------------------------------------------------------------- 128 (423)
Q Consensus 118 -----p~~~~~~w~~~---------------------------------------------------------------- 128 (423)
|.| +|..+
T Consensus 85 ~l~~~~~G---g~~~~~~~~~~v~i~~~~g~~~~g~i~~~~~~~h~~~~~~~~~~~~~~l~~~id~g~~~~~~~~~~gi~ 161 (349)
T 2gre_A 85 RLSLSMIG---GFRWNSVEGEYCEIETSSGKTYTGTILMHQTSVHVYKDAGEAKRDEKNIEVRIDERVFSADEVRELGIE 161 (349)
T ss_dssp CEEEEEES---SCCGGGTTTCEEEEECTTSCEEEEEEECC-------------------CEEEESSCCCSHHHHHHTTCC
T ss_pred eEEEEecC---CCccccccCcEEEEEcCCCCEEEEEEeCCCCCccccchhccCCCCHHHceEEeccCCCCHHHHHHcCCC
Confidence 333 23211
Q ss_pred ------------CCCCCccccCCc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHhcCCCcccce
Q 014490 129 ------------SKVPGKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEA 193 (423)
Q Consensus 129 ------------~~~~g~~~grG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~~~~~~~~~~d~ 193 (423)
...+|++|||+. |++++++|.|++.|++.+..++++|.|+|+++|| |+.|++.+ . ...++
T Consensus 162 ~gd~v~~~~~~~~~~~~~i~gr~~D~k~g~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~G~~g~~~~----~-~~~~~ 236 (349)
T 2gre_A 162 VGDFVSFDPRVQITESGYIKSRHLDDKVSVAILLKLIKRLQDENVTLPYTTHFLISNNEEIGYGGNSNI----P-EETVE 236 (349)
T ss_dssp TTCEEEECCCCEECTTSEEEESCCTTHHHHHHHHHHHHHHHHHTCCCSEEEEEEEESCC----CCCCCC----C-TTEEE
T ss_pred CCCEEEEccccEEccCCeEEEeeccchHHHHHHHHHHHHHHhccCCCCceEEEEEECcccCCchhhccc----c-cCCCE
Confidence 013578999976 7999999999999998877788999999999999 88888865 1 23556
Q ss_pred eeeeccCCCCCCceEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhcccCCCCCCceEEEEE
Q 014490 194 IFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAK 273 (423)
Q Consensus 194 ~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~ 273 (423)
+++++... ..+ |-..++.|. +
T Consensus 237 ~i~~D~~~--~~~-------------------------~p~~~~~g~-----------------------------~--- 257 (349)
T 2gre_A 237 YLAVDMGA--LGD-------------------------GQASDEYTV-----------------------------S--- 257 (349)
T ss_dssp EEEECCCC--CSC-------------------------C--CCTTSE-----------------------------E---
T ss_pred EEEEeccc--ccC-------------------------CCCCCCCce-----------------------------E---
Confidence 66543210 000 000000000 0
Q ss_pred EecCCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCccccCHHHHHHHHHHHHHh
Q 014490 274 FEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADM 353 (423)
Q Consensus 274 i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~ 353 (423)
+.+.. .. ...++.+.+.+++++++.
T Consensus 258 -------------------------------------------------i~~~~----~~--~~~~~~l~~~l~~~a~~~ 282 (349)
T 2gre_A 258 -------------------------------------------------ICAKD----SS--GPYHYALRKHLVELAKTN 282 (349)
T ss_dssp -------------------------------------------------EEEEE----TT--EECCHHHHHHHHHHHHHH
T ss_pred -------------------------------------------------EEEcc----CC--CCCCHHHHHHHHHHHHHc
Confidence 00000 00 024677888888888887
Q ss_pred cCCcccccCCCCCCCchHHHHHh--h-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHhC
Q 014490 354 LGVQNIKENRPLMGTEDFSFFAE--A-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATS 423 (423)
Q Consensus 354 ~g~~~~~~~~~~~g~tD~~~~~~--~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~~ 423 (423)
|.+.... ...+|++|++.+.. . +|++.++++.. ..|+ .|+++++++..+++++..++.+
T Consensus 283 -gi~~q~~-~~~ggGsDa~~~~~~~~GiPt~~lg~~~~--------~~Hs-~E~~~~~dl~~~~~ll~~~l~~ 344 (349)
T 2gre_A 283 -HIEYKVD-IYPYYGSDASAAIRAGFDVKHALIGAGID--------SSHA-FERTHESSIAHTEALVYAYVMS 344 (349)
T ss_dssp -TCCEEEE-ECSCC--------CCSSSCEEEEEEECCB--------STTS-SEEEEHHHHHHHHHHHHHHHHS
T ss_pred -CCCcEEe-ccCCCCccHHHHHHhCCCCcEEEeccCcc--------cccc-ceeccHHHHHHHHHHHHHHHhc
Confidence 8765321 24578899998853 3 89887766532 3899 9999999999999999988753
No 36
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=99.88 E-value=1e-21 Score=190.71 Aligned_cols=243 Identities=18% Similarity=0.162 Sum_probs=171.8
Q ss_pred HHHHHHHhHhCCCCCCCc-HHHHHHHHHHHHhCCCCeEecccCceEEEEECCCCCcEEEEEEeccccc------------
Q 014490 52 MVNIRRKIHENPELGFQE-FETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALA------------ 118 (423)
Q Consensus 52 ~~~~~~~l~~ips~s~~E-~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~~~~~~ill~~H~Dtvp------------ 118 (423)
+++++++|+++||+|++| .++++||.++|+++|++++.+ ...|++|.++++ +|+|+|.||+|+|+
T Consensus 8 ~~~~l~~L~~~~s~sg~e~~~~~~~l~~~l~~~g~~~~~d-~~gnlia~~~g~-~~~i~l~aH~D~v~~~v~~i~~~G~l 85 (353)
T 1y0y_A 8 DYELLKKVVEAPGVSGYEFLGIRDVVIEEIKDYVDEVKVD-KLGNVIAHKKGE-GPKVMIAAHMDQIGLMVTHIEKNGFL 85 (353)
T ss_dssp CHHHHHHHHHSCCBTTCGGGTHHHHHHHHHGGGSSEEEEC-TTCCEEEEECCS-SCEEEEEEECCBCEEEEEEECTTSCE
T ss_pred HHHHHHHHHhCCCCCccchHHHHHHHHHHHHhhCCeEEEc-CCCCEEEEecCC-CccEEEEeccCcccEEEEEECCCceE
Confidence 568899999999999999 999999999999999988764 567999998655 58999999999995
Q ss_pred ----CcCCCCCccc------------------------------------------------------------------
Q 014490 119 ----MEESVEWEHK------------------------------------------------------------------ 128 (423)
Q Consensus 119 ----~~~~~~w~~~------------------------------------------------------------------ 128 (423)
.|. |...
T Consensus 86 ~~~~~Gg---~~~~~~~~~~v~v~~~~g~~~~g~i~~~~~h~~~~~~~~~~~~~~~l~~d~g~~~~~~~~~~gi~~Gd~v 162 (353)
T 1y0y_A 86 RVAPIGG---VDPKTLIAQRFKVWIDKGKFIYGVGASVPPHIQKPEDRKKAPDWDQIFIDIGAESKEEAEDMGVKIGTVI 162 (353)
T ss_dssp EEEEESS---CCGGGTTTCEEEEEEETTEEEEEEEEC-------------CCCGGGCEEECSCSSHHHHHHTTCCTTCEE
T ss_pred EEEEeCC---cchhhccCCEEEEEeCCCcEEEEEEeCCCcccCchhhccCCCChHHeEEEeCCCCHHHHHHcCCCCCCEE
Confidence 332 2100
Q ss_pred -------CCCCCccccCCc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHhcCCCcccceeeeec
Q 014490 129 -------SKVPGKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLH 198 (423)
Q Consensus 129 -------~~~~g~~~grG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~~~~~~~~~~d~~i~~~ 198 (423)
...++++|||.. |++++++|.+++.|++ ++++|.|+|+++|| |+.|++.+... ...|++++++
T Consensus 163 ~~~~~~~~~~~~~i~gra~D~k~g~a~~l~a~~~l~~----~~~~i~~~~~~~EE~g~~G~~~~~~~---~~~~~~i~~d 235 (353)
T 1y0y_A 163 TWDGRLERLGKHRFVSIAFDDRIAVYTILEVAKQLKD----AKADVYFVATVQEEVGLRGARTSAFG---IEPDYGFAID 235 (353)
T ss_dssp EECCCCEEETTTEEEETTHHHHHHHHHHHHHHHHCCS----CSSEEEEEEESCCTTTSHHHHHHHHH---HCCSEEEEEE
T ss_pred EeccCcEEecCCeEEeccCccHHHHHHHHHHHHHhhc----CCCeEEEEEECCcccchhHHHHHhhc---cCCCEEEEEe
Confidence 001457888854 7999999999999875 67899999999999 88999988542 1345666543
Q ss_pred cCCCCCCceEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEecCC
Q 014490 199 VSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGG 278 (423)
Q Consensus 199 ~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gg~ 278 (423)
+... .+ .++. . ...+ ...++ +|
T Consensus 236 ~~~~--~~----~p~~------------------~--~~~g---------------------~~~lg----------~G- 257 (353)
T 1y0y_A 236 VTIA--AD----IPGT------------------P--EHKQ---------------------VTHLG----------KG- 257 (353)
T ss_dssp EEEC--CC----STTC------------------C--GGGC---------------------CCCTT----------SC-
T ss_pred cccc--cC----CCCC------------------c--cccC---------------------ccccC----------CC-
Confidence 2110 00 0100 0 0000 00000 11
Q ss_pred CCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCccccCHHHHHHHHHHHHHhcCCcc
Q 014490 279 AFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQN 358 (423)
Q Consensus 279 ~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~g~~~ 358 (423)
|. +.+.. . ....++++++.+++++++. |.+.
T Consensus 258 -----~~-------------------------------------i~~~d--~----~~~~~~~l~~~l~~~a~~~-gi~~ 288 (353)
T 1y0y_A 258 -----TA-------------------------------------IKIMD--R----SVICHPTIVRWLEELAKKH-EIPY 288 (353)
T ss_dssp -----EE-------------------------------------EEEEE--T----TEECCHHHHHHHHHHHHHT-TCCE
T ss_pred -----cE-------------------------------------EEEeC--C----CCCCCHHHHHHHHHHHHHc-CCCE
Confidence 00 01001 1 2456788999999999988 8765
Q ss_pred cccCCCCCCCchHHHH--Hhh-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 359 IKENRPLMGTEDFSFF--AEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 359 ~~~~~~~~g~tD~~~~--~~~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
... ...+|+||++.| ... +|++.+++|. ...|+++|+++++++.++++++..++.
T Consensus 289 ~~~-~~~~ggsDa~~~~~~~~GiPtv~lg~~~--------~~~Hs~~E~v~~~dl~~~~~ll~~~l~ 346 (353)
T 1y0y_A 289 QLE-ILLGGGTDAGAIHLTKAGVPTGALSVPA--------RYIHSNTEVVDERDVDATVELMTKALE 346 (353)
T ss_dssp EEE-ECSSCCCTHHHHTTSTTCCCEEEEEEEE--------BSCSSSCEEEEHHHHHHHHHHHHHHHH
T ss_pred EEe-ecCCCCchHHHHHHhCCCCcEEEEcccc--------cccCCHHHhcCHHHHHHHHHHHHHHHH
Confidence 321 246788999999 555 9998877653 238999999999999999999998875
No 37
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.87 E-value=2.5e-21 Score=187.51 Aligned_cols=241 Identities=16% Similarity=0.120 Sum_probs=164.7
Q ss_pred HHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEecccCceEEEEECCCCCcEEEEEEecccccCc----------
Q 014490 51 WMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAME---------- 120 (423)
Q Consensus 51 ~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~~~~~~ill~~H~Dtvp~~---------- 120 (423)
++++++++|+++||+|++|.++++||.++|+++|++++.+ ...|+++.+.+++.|.|+|.||+|||+.-
T Consensus 6 ~~~~~l~~Lv~~~s~sg~e~~~~~~l~~~l~~~g~~~~~d-~~gnlia~~~g~~~~~i~l~aH~DtV~~~v~~i~~G~l~ 84 (346)
T 1vho_A 6 ETGKLLMELSNLDGPSGYETNVVSYIKSVIEPFVDEAKTT-RHGSLIGYKKGKGIGKLAFFAHVDEIGFVVSKVEGQFAR 84 (346)
T ss_dssp CHHHHHHHHHHSCCBTTCCHHHHHHHHHHHGGGCSEEEEC-TTSCEEEEECCSSSCEEEEEEECCBCCEEEEEEETTEEE
T ss_pred HHHHHHHHHHcCCCCCcchHHHHHHHHHHHHhhCCEEEEe-cCCcEEEEEcCCCCceEEEEecCcccceEeEEecCCeEE
Confidence 4678999999999999999999999999999999987764 46799999865445899999999999520
Q ss_pred --CCCCCcccC-----------------------------------------------------------------CCCC
Q 014490 121 --ESVEWEHKS-----------------------------------------------------------------KVPG 133 (423)
Q Consensus 121 --~~~~w~~~~-----------------------------------------------------------------~~~g 133 (423)
...+|.... ..+|
T Consensus 85 ~~~~Gg~~~~~~~g~~~~~~~~~g~~~G~i~~~~~h~~~~~~~~~~~~~~~l~id~g~~~eei~~G~~~~~~~~~~~~g~ 164 (346)
T 1vho_A 85 LEPVGGVDPKVVYASKVRIYTKNGIERGVIGMLAPHLQDSESRKKVPTYDEIFVDLSLCERGVRVGDIAVIDQTAFETNG 164 (346)
T ss_dssp EEEC--------CCCEEEEEETTEEEEEETTCCCSCCCCHHHHHTSCCTTCCEEEGGGSSSCCCTTCEEEECCCCEEETT
T ss_pred EEEeCCccCcccccCEEEEEcCCCcEEEEEcCCCcccCchhhcccCCChhHeEEEeccchhcCCCCCEEEEccchhhhcC
Confidence 111332110 0025
Q ss_pred ccccCCc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHhcCCCcccceeeeeccCCCCCCceEEe
Q 014490 134 KMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVAS 210 (423)
Q Consensus 134 ~~~grG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~~~~~~~~~~d~~i~~~~~~~~p~g~~~~ 210 (423)
+++||+. |+++++++.+++.+++.+ +++++.++|+.+|| |+.|+..... .+ ..++++.++
T Consensus 165 ~i~g~~~D~r~g~aa~l~al~~l~~~~--~~~~~~~~~t~~EEvG~~Ga~~~~~--~i-~~~~~i~~D------------ 227 (346)
T 1vho_A 165 KVVGKALDNRASCGVLVKVLEFLKRYD--HPWDVYVVFSVQEETGCLGALTGAY--EI-NPDAAIVMD------------ 227 (346)
T ss_dssp EEEETTHHHHHHHHHHHHHHHHHTTCC--CSSEEEEEEECTTSSSHHHHHHTTC--CC-CCSEEEEEE------------
T ss_pred eEEeccCccHHHHHHHHHHHHHhhhcC--CCceEEEEEECCcccchhhHHHHhc--cc-CCCEEEEee------------
Confidence 6888876 689999999999997654 66899999999999 7788876421 11 123333221
Q ss_pred ecCcccCcceEEEEEEEeCCCCCC-CCCCCCcHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEecCCCCccCCCcEEE
Q 014490 211 RPGPTLAAGGFFEAVINGKGGHAA-IPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTI 289 (423)
Q Consensus 211 ~~g~~~~g~~~~~i~v~G~~~Hs~-~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gg~~~n~iP~~a~~ 289 (423)
++ |++ .|. .+ . . .++ .
T Consensus 228 -------------~~------~~~~~~~--~~--~-----------~------~~~----------~------------- 244 (346)
T 1vho_A 228 -------------VT------FASEPPF--SD--H-----------I------ELG----------K------------- 244 (346)
T ss_dssp -------------EE------CCCCTTS--CC--C-----------C------CTT----------S-------------
T ss_pred -------------cc------cccCCCC--Cc--c-----------c------ccC----------C-------------
Confidence 11 111 110 00 0 0 000 0
Q ss_pred EEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCccccCHHHHHHHHHHHHHhcCCcccccCCCC-C-C
Q 014490 290 GGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPL-M-G 367 (423)
Q Consensus 290 ~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~g~~~~~~~~~~-~-g 367 (423)
+..+++ +...++++++.+++++++. |.++.. ... + |
T Consensus 245 ------------------------------g~~i~~---------~~~~~~~l~~~~~~~a~~~-gi~~~~--~~~~g~g 282 (346)
T 1vho_A 245 ------------------------------GPVIGL---------GPVVDRNLVQKIIEIAKKH-NVSLQE--EAVGGRS 282 (346)
T ss_dssp ------------------------------CCEEEC---------STTSCHHHHHHHHHHHHHT-TCCCEE--ESSCCC-
T ss_pred ------------------------------CceEEe---------CCcCCHHHHHHHHHHHHHC-CCCEEE--EeCCCCC
Confidence 111221 2356788999999999987 886643 223 4 8
Q ss_pred CchHHHHHh--h-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 368 TEDFSFFAE--A-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 368 ~tD~~~~~~--~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
++|++.+.. . +|++++++|.. ..|+++|+++++++.++++++..++.
T Consensus 283 gsDa~~~~~~~~gipt~~lg~~~~--------~~Hs~~E~~~~~dl~~~~~ll~~~~~ 332 (346)
T 1vho_A 283 GTETDFVQLVRNGVRTSLISIPLK--------YMHTPVEMVDPRDVEELARLLSLVAV 332 (346)
T ss_dssp ---CTTHHHHHTTCEEEEEEEECB--------STTSTTEEECHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHhCCCCcEEEEehhhc--------ccccHHHhcCHHHHHHHHHHHHHHHH
Confidence 899999964 3 99988877642 38999999999999999999999875
No 38
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=99.85 E-value=8.3e-22 Score=188.55 Aligned_cols=237 Identities=14% Similarity=0.090 Sum_probs=165.3
Q ss_pred hHHHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEecc------cCceEEEEECCCCCcEEEEEEeccccc---
Q 014490 48 IFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPV------AVTGVVGYIGTGQPPFVALRADMDALA--- 118 (423)
Q Consensus 48 ~~~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~~------~~~nvia~~~~~~~~~ill~~H~Dtvp--- 118 (423)
+++++++++++|+++||+|++|.++++||.++|+++|++++.+. ..+|+++.+++ + |.++|.||||||+
T Consensus 15 ~~~~~~~~l~~Lv~i~s~sg~e~~v~~~l~~~l~~~g~~v~~d~~~~~~~~~gnlia~~~g-~-~~ill~aH~DtV~~~v 92 (321)
T 3cpx_A 15 LYFQGMQLLKELCSIHAPSGNEEPLKDFILEYIRSNAGSWSYQPVIYADNDLQDCIVLVFG-N-PRTAVFAHMDSIGFTV 92 (321)
T ss_dssp GGCCHHHHHHHHHHSCCBTTCCHHHHHHHHHHHHHHGGGSSSCCEEECSGGGTTCEEEEES-S-CSEEEEEECCBCEEEE
T ss_pred HHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhhCCeEEEccccccccCCccEEEEecC-C-ceEEEEecCCcCCeEe
Confidence 44678999999999999999999999999999999999866543 15799999865 4 8899999999994
Q ss_pred --------CcCCCCCc-----ccCCC-------------------------------------CCccccCCc--hHHHHH
Q 014490 119 --------MEESVEWE-----HKSKV-------------------------------------PGKMHACGH--DAHVAM 146 (423)
Q Consensus 119 --------~~~~~~w~-----~~~~~-------------------------------------~g~~~grG~--k~~~a~ 146 (423)
.+....|. ..... +|+++||+. |+++++
T Consensus 93 ~~i~~~~~~Gg~~~~~~~~v~~~~~~g~~~gvi~~~ee~~~ida~~lv~~Gd~v~~~~~~~~~~g~i~~~~~D~k~G~aa 172 (321)
T 3cpx_A 93 SYNNHLHPIGSPSAKEGYRLVGKDSNGDIEGVLKIVDEEWMLETDRLIDRGTEVTFKPDFREEGDFILTPYLDDRLGVWT 172 (321)
T ss_dssp CSTTBEEEESSCCCCTTCEEEEEETTEEEEEEEECGGGSCEEECSSCCCTTCEEEECCCCEEETTEEECTTHHHHHHHHH
T ss_pred cccCCeEEcCChhhcccCEEEEEeCCCceeeeECCccHHHHHHHHhcCCCCCEEEeccCcEEEcCEEEEcCCcCHHHHHH
Confidence 33211221 00000 267888876 799999
Q ss_pred HHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHH---hcCCCcccceeeeeccCCCCCCceEEeecCcccCcceEE
Q 014490 147 LLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKML---DAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFF 222 (423)
Q Consensus 147 ~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~~---~~~~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~ 222 (423)
+|.+++.++ . +.++|+++|| |+.|++... .+. + +.++++.+++.. .+.
T Consensus 173 ~l~al~~l~------~--i~~~~t~~EEvG~~Ga~~a~~~~~~~-~-~~~~~i~~D~~~---------------~~~--- 224 (321)
T 3cpx_A 173 ALELAKTLE------H--GIIAFTCWEEHGGGSVAYLARWIYET-F-HVKQSLICDITW---------------VTE--- 224 (321)
T ss_dssp HHHHTTTCC------S--EEEEEESSTTTTCCSHHHHHHHHHHH-H-CCCEEEECCCEE---------------CCS---
T ss_pred HHHHHHHhc------C--cEEEEECCccCchhcchhhhhccccc-c-CCCEEEEEeCcc---------------ccC---
Confidence 999988764 1 9999999999 888888532 111 1 345555432100 010
Q ss_pred EEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEecCCCCccCCCcEEEEEEEecCChhhHH
Q 014490 223 EAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESII 302 (423)
Q Consensus 223 ~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~ 302 (423)
. . .++ .
T Consensus 225 --------------------------------~-----~-~~~----------~-------------------------- 230 (321)
T 3cpx_A 225 --------------------------------G-----V-EAG----------K-------------------------- 230 (321)
T ss_dssp --------------------------------S-----S-CTT----------S--------------------------
T ss_pred --------------------------------C-----c-ccC----------C--------------------------
Confidence 0 0 000 0
Q ss_pred HHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCccccCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHH--hh-cC
Q 014490 303 QLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFA--EA-IP 379 (423)
Q Consensus 303 ~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~--~~-ip 379 (423)
|..+ .. .. ....++++++.+++++++. |.+.... ...+|+||++.+. .. +|
T Consensus 231 -----------------G~~i--~~--~~---~~~~~~~l~~~~~~~a~~~-gi~~q~~-~~~~GGsD~~~~~~s~~Gip 284 (321)
T 3cpx_A 231 -----------------GVAI--SM--RD---RMIPRKKYVNRIIELARQT-DIPFQLE-VEGAGASDGRELQLSPYPWD 284 (321)
T ss_dssp -----------------CEEE--EE--ES---SSCCCHHHHHHHHHHHTTS-SCCEEEE-ECSSCCCHHHHHHHSSSCCB
T ss_pred -----------------CcEE--EE--CC---CCCCCHHHHHHHHHHHHHc-CCCEEEE-eCCCCCccHHHHHHhCCCCC
Confidence 1112 22 11 1246788999999999887 8865321 2367899999984 34 89
Q ss_pred eEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 380 GYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 380 ~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
++.+++|. ...|+++|+++++++...+++++.++.
T Consensus 285 t~~lG~~~--------~~~Hs~~E~~~~~dl~~~~~ll~~~~~ 319 (321)
T 3cpx_A 285 WCFIGAPE--------KDAHTPNECVHKKDIESMVGLYKYLME 319 (321)
T ss_dssp CCBEECEE--------BSTTSTTCEEEHHHHHHHHHHHHHHHH
T ss_pred EEEEchhh--------cccchhhhheeHHHHHHHHHHHHHHHH
Confidence 88766553 248999999999999999999999875
No 39
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=99.85 E-value=5.3e-20 Score=178.32 Aligned_cols=246 Identities=14% Similarity=0.127 Sum_probs=170.5
Q ss_pred HHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEecccCceEEEEECCCCCcEEEEEEecccccC--------c-----
Q 014490 54 NIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAM--------E----- 120 (423)
Q Consensus 54 ~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~~~~~~ill~~H~Dtvp~--------~----- 120 (423)
+++++|+++||+|++|.++++||.++|+++|++++.+ ...|+++++.+.+.|.|+|.||+|||+. +
T Consensus 7 ~~l~~Lv~~~s~sg~e~~~~~~l~~~l~~~g~~v~~d-~~gnlia~~~g~~~~~vll~aH~DtV~~~v~~i~~~G~~~~~ 85 (348)
T 1ylo_A 7 SLLKALSEADAIASSEQEVRQILLEEAARLQKEVRFD-GLGSVLIRLNESTGPKVMICAHMDEVGFMVRSISREGAIDVL 85 (348)
T ss_dssp HHHHHHHHSCCBTTBCHHHHHHHHHHHHHTTCCEEEC-TTCCEEEECCCCSSCEEEEEEECCCCEEEEEEECTTCCEEEE
T ss_pred HHHHHHHcCCCCCCchHHHHHHHHHHHHhhCCEEEEe-cCCCEEEEecCCCCceEEEEEcCCccceEEEEECCCCeEEEE
Confidence 6899999999999999999999999999999998764 4569999986544589999999999951 0
Q ss_pred CCCCCcc---------------------------------------------------------------cCCCCCcccc
Q 014490 121 ESVEWEH---------------------------------------------------------------KSKVPGKMHA 137 (423)
Q Consensus 121 ~~~~w~~---------------------------------------------------------------~~~~~g~~~g 137 (423)
....|.+ ....+|+++|
T Consensus 86 ~~Gg~~~~~~~g~~v~~~~~~G~~~~h~~~~~~~~~~~~~l~id~G~~s~~~~~~~gi~~g~~i~~~~~~~~~~~~~~~~ 165 (348)
T 1ylo_A 86 PVGNVRMAARQLQPVRITTREECKIPGLLDGDRQGNDVSAMRVDIGARTYDEVMQAGIRPGDRVTFDTTFQVLPHQRVMG 165 (348)
T ss_dssp EESCCCGGGSSSEEEEEECTTCCEEEEEEEEEEETTEEEEEEEECSCCSHHHHHHTTCCTTCEEEECCCCEEETTTEEEE
T ss_pred ecCCcchhhccCCEEEEEeCCCCCCcchhhhhccCCChhHEEEEecCCCHHHHHHcCCCCCCEEEEccccEEecCCEEEe
Confidence 0011211 0114578899
Q ss_pred CCc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHhcCCCcccceeeeeccCCCCCCceEEeecCc
Q 014490 138 CGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGP 214 (423)
Q Consensus 138 rG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~~~~~~~~~~d~~i~~~~~~~~p~g~~~~~~g~ 214 (423)
|+. |+++++++.+++.+++.+ ++.++.++|+++|| |+.|++..... + ..|+.+.++...
T Consensus 166 ~~~D~k~g~aa~l~al~~l~~~~--~~~~~~~~~t~~EEvG~~Ga~~~~~~--i-~~~~~i~~D~~~------------- 227 (348)
T 1ylo_A 166 KAFDDRLSCYLLVTLLRELHDAE--LPAEVWLVASSSEEVGLRGGQTATRA--V-SPDVAIVLDTAC------------- 227 (348)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTCC--CSSEEEEEEESCCTTSSHHHHHHHHH--H-CCSEEEEECCCC-------------
T ss_pred cCcccHHHHHHHHHHHHHhhhcC--CCceEEEEEEcccccchhHHHHhhcc--c-CCCEEEEEeccc-------------
Confidence 976 699999999999987654 67899999999999 88888765331 1 234555432210
Q ss_pred ccCcceEEEEEEEeCCCCCC-CCCCCCcHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEecCCCCccCCCcEEEEEEE
Q 014490 215 TLAAGGFFEAVINGKGGHAA-IPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTF 293 (423)
Q Consensus 215 ~~~g~~~~~i~v~G~~~Hs~-~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gg~~~n~iP~~a~~~~d~ 293 (423)
++ .|. .+. .. ...++ .
T Consensus 228 ------------------~~~~~~--~~~-----------~~-----~~~~~----------~----------------- 244 (348)
T 1ylo_A 228 ------------------WAKNFD--YGA-----------AN-----HRQIG----------N----------------- 244 (348)
T ss_dssp ------------------CSSTTC--CST-----------TC-----CCCTT----------S-----------------
T ss_pred ------------------cCCCCC--CCc-----------cc-----cccCC----------C-----------------
Confidence 00 111 110 00 00000 0
Q ss_pred ecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCccccCHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHH
Q 014490 294 RAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSF 373 (423)
Q Consensus 294 R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~ 373 (423)
|..+++.. . +...++.+++.+++++++. |.+.... ...+|++|++.
T Consensus 245 --------------------------G~~i~~~~---~---~~~~~~~l~~~~~~~a~~~-gi~~~~~-~~~~ggsDa~~ 290 (348)
T 1ylo_A 245 --------------------------GPMLVLSD---K---SLIAPPKLTAWIETVAAEI-GVPLQAD-MFSNGGTDGGA 290 (348)
T ss_dssp --------------------------CCEEEEEC---S---SCBCCHHHHHHHHHHHHHH-TCCCEEE-ECSSCCCHHHH
T ss_pred --------------------------CcEEEEeC---C---CCCCCHHHHHHHHHHHHHc-CCCeEEe-ecCCCcchHHH
Confidence 11111111 1 2345788999999999887 8765321 34678999999
Q ss_pred HHh--h-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHhC
Q 014490 374 FAE--A-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATS 423 (423)
Q Consensus 374 ~~~--~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~~ 423 (423)
+.. . +|++++++|. ...|+++|+++++++..+++++..++.+
T Consensus 291 ~~~~~~gipt~~lg~~~--------~~~Hs~~E~~~~~d~~~~~~ll~~~~~~ 335 (348)
T 1ylo_A 291 VHLTGTGVPTLVMGPAT--------RHGHCAASIADCRDILQMEQLLSALIQR 335 (348)
T ss_dssp HHTSTTCCCEEEEECCC--------BSCSSSCEEEEHHHHHHHHHHHHHHHHT
T ss_pred HHHhcCCCCEEEECccc--------CcCCCcceEeeHHHHHHHHHHHHHHHHH
Confidence 964 3 9988776653 2399999999999999999999998863
No 40
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=99.76 E-value=7.1e-17 Score=155.53 Aligned_cols=245 Identities=13% Similarity=0.057 Sum_probs=170.3
Q ss_pred HHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEecccCceEEEEECCC--CCcEEEEEEecccccC-----cC-
Q 014490 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG--QPPFVALRADMDALAM-----EE- 121 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~~--~~~~ill~~H~Dtvp~-----~~- 121 (423)
.++++++++|+++||+|++|.++++||.++|+++|++++. +...|+++++++. ++|.|+|.||||+|+. .+
T Consensus 3 ~~~~~~l~~L~~ips~SG~E~~v~~~l~~~l~~~g~~~~~-D~~GNli~~~~g~~~~~~~v~l~aHmD~Vg~mV~~I~~~ 81 (355)
T 3kl9_A 3 TTLFSKIKEVTELAAVSGHEAPVRAYLREKLTPHVDEVVT-DGLGGIFGIKHSEAVDAPRVLVASHMDEVGFMVSEIKPD 81 (355)
T ss_dssp HHHHHHHHHHHTSCCBTTCCHHHHHHHHHHHGGGSSEEEE-CTTSCEEEEECCCSTTCCEEEEEEECCBCEEEEEEECTT
T ss_pred HHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCEEEE-CCCCeEEEEECCcCCCCCeEEEEeccccccceEEEECCC
Confidence 3578999999999999999999999999999999998876 4577999999654 4699999999999953 11
Q ss_pred -------CCCCcc-------------------------------------------------------------------
Q 014490 122 -------SVEWEH------------------------------------------------------------------- 127 (423)
Q Consensus 122 -------~~~w~~------------------------------------------------------------------- 127 (423)
-.+|..
T Consensus 82 G~l~~~~iGG~~~~~~~~~~v~i~t~~g~~~~Gvig~~~~H~~~~~~~~~~~~~~~~~iD~g~~s~ee~~~~GI~~Gd~v 161 (355)
T 3kl9_A 82 GTFRVVEIGGWNPMVVSSQRFKLLTRDGHEIPVISGSVPPHLTRGKGGPTMPAIADIVFDGGFADKAEAESFGIRPGDTI 161 (355)
T ss_dssp SCEEEEEESCCCTTTCSSCEEEEECTTSCEEEEEEC---------------CCGGGSCEECCCSSHHHHHHTTCCTTCEE
T ss_pred CEEEEEecCCccccccCCCEEEEEcCCCCEEEEEEeCccccccChhhccCCCChhhEEEEeccCCHHHHHHcCCCCCCEE
Confidence 112320
Q ss_pred --c----CCC-CCccccCCc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHhcCCCcccceeeee
Q 014490 128 --K----SKV-PGKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGL 197 (423)
Q Consensus 128 --~----~~~-~g~~~grG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~~~~~~~~~~d~~i~~ 197 (423)
+ ... ++.+.|+.- +.+++++|.+++.+++. .++.+++++|+..|| |..|++..... . ..|.++++
T Consensus 162 ~~d~~~~~~~~~~~i~s~~lDnr~g~~~~l~~l~~l~~~--~~~~~v~~~ft~qEEvG~~Ga~~a~~~-~--~pd~~i~~ 236 (355)
T 3kl9_A 162 VPDSSAILTANEKNIISKAWDNRYGVLMVSELAEALSGQ--KLGNELYLGSNVQEEVGLRGAHTSTTK-F--DPEVFLAV 236 (355)
T ss_dssp EECCCCEECTTSSEEEESCHHHHHHHHHHHHHHHHHSSC--CCSSEEEEEEESCCTTTSHHHHHHHHH-H--CCSEEEEE
T ss_pred EeccceEEecCCCEEEeeccccHHHHHHHHHHHHHhhhc--CCCceEEEEEECccccCcchhHHHHhc-c--CCCEEEEe
Confidence 0 000 134555654 58999999999998754 478999999999999 88887765321 1 12333322
Q ss_pred ccCCCCCCceEEeecCcccCcceEEEEEEEeCCCCCCC-CCCCCcHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEec
Q 014490 198 HVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAI-PQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEG 276 (423)
Q Consensus 198 ~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~-p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~g 276 (423)
+ +. |+.. |.. . . .+ ..
T Consensus 237 D-------------------------~~------~a~d~p~~------------------~---~-~l----------g~ 253 (355)
T 3kl9_A 237 D-------------------------CS------PAGDVYGG------------------Q---G-KI----------GD 253 (355)
T ss_dssp E-------------------------EE------ECCGGGTS------------------S---C-CT----------TS
T ss_pred c-------------------------Cc------cCCCCCCc------------------c---c-cc----------CC
Confidence 1 11 1111 100 0 0 00 00
Q ss_pred CCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCccccCHHHHHHHHHHHHHhcCC
Q 014490 277 GGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGV 356 (423)
Q Consensus 277 g~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~g~ 356 (423)
|.-+.+.. . ....++.+.+.+++++++. |.
T Consensus 254 -------------------------------------------G~~i~~~d----~--~~~~~~~l~~~l~~~a~~~-gI 283 (355)
T 3kl9_A 254 -------------------------------------------GTLIRFYD----P--GHLLLPGMKDFLLTTAEEA-GI 283 (355)
T ss_dssp -------------------------------------------CEEEEEEE----T--TEECCHHHHHHHHHHHHHT-TC
T ss_pred -------------------------------------------CcEEEEec----C--CCCCCHHHHHHHHHHHHHc-CC
Confidence 11111111 1 2345788999999999887 88
Q ss_pred cccccCCCCCCCchHHHHHh--h-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHhC
Q 014490 357 QNIKENRPLMGTEDFSFFAE--A-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATS 423 (423)
Q Consensus 357 ~~~~~~~~~~g~tD~~~~~~--~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~~ 423 (423)
+... ...+|+||++.+.. . +|++.+++|... .|++.|+++++++..+++++..++.+
T Consensus 284 p~q~--~~~ggGtDa~~i~~a~~Gipt~~igvp~~~--------~Hs~~E~~~~~Di~~~~~ll~~~l~~ 343 (355)
T 3kl9_A 284 KYQY--YCGKGGTDAGAAHLKNGGVPSTTIGVCARY--------IHSHQTLYAMDDFLEAQAFLQALVKK 343 (355)
T ss_dssp CEEE--EECSSCCTHHHHTTSTTCCCEEEEEEEEBS--------CSSSCEEEEHHHHHHHHHHHHHHHHT
T ss_pred CEEE--ECCCcchHHHHHHHhCCCCCEEEEccCcCC--------CCCcceEeeHHHHHHHHHHHHHHHHH
Confidence 6543 34568999999874 3 999988887543 89999999999999999999998753
No 41
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=99.73 E-value=8.3e-18 Score=158.06 Aligned_cols=119 Identities=14% Similarity=0.092 Sum_probs=104.1
Q ss_pred HHHHHHHHHhHhCCCCCC--------CcHHHHHHHHHHHHhCCCCeEeccc------CceEEEEECCC-CCcEEEEEEec
Q 014490 50 YWMVNIRRKIHENPELGF--------QEFETSKLIRAELDQMGIPYKFPVA------VTGVVGYIGTG-QPPFVALRADM 114 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~--------~E~~~~~~l~~~l~~~g~~~~~~~~------~~nvia~~~~~-~~~~ill~~H~ 114 (423)
+++++++++|++|||+++ .|.++++||.++|+++|++++.+.. ++||+++++++ ++++|+|.+|+
T Consensus 7 ~~~~~~l~~L~~i~s~s~~~r~~~~~~e~~~~~~i~~~l~~~g~~v~~~~~~~~~~~~~nvi~~~~g~~~~~~i~l~aH~ 86 (284)
T 1tkj_A 7 ANVKAHLTQLSTIAANNGGNRAHGRPGYKASVDYVKAKLDAAGYTTTLQQFTSGGATGYNLIANWPGGDPNKVLMAGAHL 86 (284)
T ss_dssp HHHHHHHHHHHHHHHTTTTCCCTTSHHHHHHHHHHHHHHHHHTCEEEEEEEEETTEEEEEEEEECSCSEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHcccccCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEEEeccCCCCceeEEEEEeCCCCCCEEEEEeec
Confidence 778999999999999986 5789999999999999998876422 57999999765 35899999999
Q ss_pred ccccCcCCCCCcccCCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHhc
Q 014490 115 DALAMEESVEWEHKSKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDA 185 (423)
Q Consensus 115 Dtvp~~~~~~w~~~~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~~~~ 185 (423)
|+||. |||+ |+|++++|++++.|++.+..++++|+|+|+++|| |..|+++++++
T Consensus 87 D~v~~-----------------g~Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~g~~Gs~~~~~~ 144 (284)
T 1tkj_A 87 DSVSS-----------------GAGINDNGSGSAAVLETALAVSRAGYQPDKHLRFAWWGAEELGLIGSKFYVNN 144 (284)
T ss_dssp CCCTT-----------------SCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGTSHHHHHHHHH
T ss_pred CCCCC-----------------CCCCccChHHHHHHHHHHHHHHhcCCCCCceEEEEEECCcccCCcCHHHHHhh
Confidence 99994 4565 7999999999999998877889999999999999 78999999875
No 42
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=99.71 E-value=4.4e-17 Score=154.30 Aligned_cols=127 Identities=15% Similarity=0.166 Sum_probs=105.9
Q ss_pred HHHHHHHHHhHhCCCC---CCCcHHHHHHHHHHHHhCCC--C-eEecc------cCceEEEEECCCC--CcEEEEEEecc
Q 014490 50 YWMVNIRRKIHENPEL---GFQEFETSKLIRAELDQMGI--P-YKFPV------AVTGVVGYIGTGQ--PPFVALRADMD 115 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~---s~~E~~~~~~l~~~l~~~g~--~-~~~~~------~~~nvia~~~~~~--~~~ill~~H~D 115 (423)
+++++++++|+++|+. ++.|.++++||.++|+++|+ + ++.+. .++||++++++.. +++|+|.||+|
T Consensus 20 ~~~~~~l~~L~~i~sr~~~s~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~nvi~~~~g~~~~~~~v~l~aH~D 99 (299)
T 1rtq_A 20 SQITGTISSLESFTNRFYTTTSGAQASDWIASEWQALSASLPNASVKQVSHSGYNQKSVVMTITGSEAPDEWIVIGGHLD 99 (299)
T ss_dssp HHHHHHHHHHHTSSCCCTTSHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEETTEEEEEEEEEECCSSEEEEEEEEEEECC
T ss_pred HHHHHHHHHHhCcCCCCCCCchHHHHHHHHHHHHHHhcCCcccceeeeeccCCCCCceEEEEEECCCCCCCEEEEEeccc
Confidence 7799999999999953 55678999999999999874 3 32221 2489999996542 48899999999
Q ss_pred cccCcCCCCCcccCCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHhc
Q 014490 116 ALAMEESVEWEHKSKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDA 185 (423)
Q Consensus 116 tvp~~~~~~w~~~~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~~~~ 185 (423)
||| ..|.. +.+||||+ |+|++++|+++++|++.+..++++|.|+|+++|| |..|+++++++
T Consensus 100 ~v~----~~~~~-----~~~~~~Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~g~~Gs~~~~~~ 164 (299)
T 1rtq_A 100 STI----GSHTN-----EQSVAPGADDDASGIAAVTEVIRVLSENNFQPKRSIAFMAYAAEEVGLRGSQDLANQ 164 (299)
T ss_dssp CCS----STTCC-----TTCCCCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGTSHHHHHHHHH
T ss_pred cCC----CcCcC-----CCcccCCCcccHHHHHHHHHHHHHHHHcCCCCCceEEEEEECCccCCchhHHHHHHh
Confidence 998 25643 57899998 7999999999999998887889999999999999 88999999764
No 43
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=99.67 E-value=3.7e-15 Score=143.37 Aligned_cols=241 Identities=16% Similarity=0.098 Sum_probs=163.6
Q ss_pred HHHHHHHhHhCCCCCCCcH-HHHHHHHHHHHhCCCCeEecccCceEEEEECCCCCcEEEEEEecccccC-----cC----
Q 014490 52 MVNIRRKIHENPELGFQEF-ETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAM-----EE---- 121 (423)
Q Consensus 52 ~~~~~~~l~~ips~s~~E~-~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~~~~~~ill~~H~Dtvp~-----~~---- 121 (423)
+++++++|+++||+|++|. ++++||.++|+++|++++. +..+|+++++++++ |.|+|.||||+|+. .+
T Consensus 11 ~~~~l~~L~~ipspSG~E~~~v~~~l~~~l~~~g~~~~~-D~~GNvi~~~~g~~-~~v~l~aHmDtVg~mV~~I~~~G~l 88 (354)
T 2vpu_A 11 DWKLMQEIIEAPGVSGYEHLGIRDIVVDVLKEVADEVKV-DKLGNVIAHFKGSS-PRIMVAAHMDKIGVMVNHIDKDGYL 88 (354)
T ss_dssp CHHHHHHHHHSCCBTTCGGGTHHHHHHHHHHTTCSEEEE-CTTCCEEEEECCSS-SEEEEECCCCBCEEEEEEECTTSCE
T ss_pred HHHHHHHHHhCCCCCcccHHHHHHHHHHHHHHhCCEEEE-cCCCeEEEEEcCCC-CEEEEEecccccceeEEEECCCCEE
Confidence 6788999999999999999 9999999999999998776 45779999997654 99999999999954 11
Q ss_pred ----CCCCcc-----------------------------c-C--------------------------------------
Q 014490 122 ----SVEWEH-----------------------------K-S-------------------------------------- 129 (423)
Q Consensus 122 ----~~~w~~-----------------------------~-~-------------------------------------- 129 (423)
-.+|.. + .
T Consensus 89 ~~~~iGG~~~~~~~~~~v~i~t~~g~~~Gvi~~~~~H~~~~~~~~~~~~~~~~l~iD~g~~s~ee~~~~GI~~Gd~v~~d 168 (354)
T 2vpu_A 89 HIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQEDKGSKIDWDQIVVDVGASSKEEAEEMGFRVGTVGEFA 168 (354)
T ss_dssp EEEEESSCCGGGGTTCEEEEEETTEEEEEEECCCCSTTC---------CCGGGCCEECSCSSHHHHHHTTCCTTCEEEEC
T ss_pred EEEccCCcccccccCCEEEEEcCCCcEEEEEcCCCccccCcccccccCCCcceEEEEecCCCHHHHHhcCCCCCCEEEEe
Confidence 113320 0 0
Q ss_pred -----CCCCccccCCc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHhcCCCcccceeeeeccCC
Q 014490 130 -----KVPGKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSS 201 (423)
Q Consensus 130 -----~~~g~~~grG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~~~~~~~~~~d~~i~~~~~~ 201 (423)
..++++.++.- +.+++++|.+++.+++ ++.+++++|+..|| |..|++..... . ..|.+++++
T Consensus 169 ~~~~~~~~~~i~s~~lDnr~g~~~~l~~l~~l~~----~~~~v~~~ft~qEEVG~~ga~~aa~~-i--~pd~~i~~D--- 238 (354)
T 2vpu_A 169 PNFTRLNEHRFATPYLDDRICLYAMIEAARQLGD----HEADIYIVGSVQEEVGLRGARVASYA-I--NPEVGIAMD--- 238 (354)
T ss_dssp CCCEECSSSEEECTTHHHHHHHHHHHHHHHHCCC----CSSEEEEEECSCCTTTSHHHHHHHHH-H--CCSEEEEEE---
T ss_pred eEEEEeCCceEEEecCccHHHHHHHHHHHHHhhc----CCCeEEEEEECCcccCccchhhhhcc-c--CCCEEEEec---
Confidence 01234445554 5899999999888753 67899999999999 88887754211 1 123333221
Q ss_pred CCCCceEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEecCCCCc
Q 014490 202 LFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFN 281 (423)
Q Consensus 202 ~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gg~~~n 281 (423)
+. |+..|.... ... ..+..|
T Consensus 239 ----------------------v~------~a~dp~~~~-------------------~~~---------~~lg~G---- 258 (354)
T 2vpu_A 239 ----------------------VT------FAKQPHDKG-------------------KIV---------PELGKG---- 258 (354)
T ss_dssp ----------------------EE------ECCCTTSTT-------------------CCC---------CCTTSC----
T ss_pred ----------------------cc------ccCCCCccc-------------------ccC---------ceECCc----
Confidence 11 111121000 000 000111
Q ss_pred cCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCccccCHHHHHHHHHHHHHhcCCccccc
Q 014490 282 IIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKE 361 (423)
Q Consensus 282 ~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~g~~~~~~ 361 (423)
| .+| . ....|+.+.+.+++++++. |.+....
T Consensus 259 --p-----v~d--------------------------------------~---~~~~~~~l~~~l~~~a~~~-gIp~q~~ 289 (354)
T 2vpu_A 259 --P-----VMD--------------------------------------V---GPNINPKLRAFADEVAKKY-EIPLQVE 289 (354)
T ss_dssp --C-----EEE--------------------------------------E---STTSCHHHHHHHHHHHHHT-TCCCEEE
T ss_pred --c-----eEc--------------------------------------C---CCCCCHHHHHHHHHHHHHc-CCCcEEE
Confidence 1 001 0 1244678899999999887 8765322
Q ss_pred CCCCC-CCchHHHHHh--h-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 362 NRPLM-GTEDFSFFAE--A-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 362 ~~~~~-g~tD~~~~~~--~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
. ..+ |+||++.+.. . +|++.+++|... .|++.|+++++++..+++++..++.
T Consensus 290 ~-~~g~gGtDa~~i~~a~~Gipt~~Igvp~~~--------~Hs~~E~~~~~D~~~~~~ll~~~l~ 345 (354)
T 2vpu_A 290 P-SPRPTGTDANVMQINKEGVATAVLSIPIRY--------MHSQVELADARDVDNTIKLAKALLE 345 (354)
T ss_dssp E-CCSCCSSTHHHHHTSTTCCEEEEEEEEEBS--------TTSTTCEEEHHHHHHHHHHHHHHHH
T ss_pred e-CCCCCccHHHHHHHhcCCCCEEEECccccc--------CcCcceEeeHHHHHHHHHHHHHHHH
Confidence 2 234 7999999864 3 899988887543 9999999999999999999998875
No 44
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=99.64 E-value=9.6e-15 Score=139.52 Aligned_cols=245 Identities=18% Similarity=0.171 Sum_probs=163.5
Q ss_pred HHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEecccCceEEEEECCCCCcEEEEEEecccccC-----cC---
Q 014490 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAM-----EE--- 121 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~~~~~~ill~~H~Dtvp~-----~~--- 121 (423)
..+.+++++|.++|++|+.|.++++||.++|+++|++++. +..+|+++++++ ++|+|+|.||||+|+. .+
T Consensus 11 ~~~~~~l~~L~~~pspSG~E~~v~~~i~~~l~~~~~e~~~-D~~Gnvi~~~g~-~~~~v~l~aHmDevG~mV~~I~~~G~ 88 (343)
T 3isx_A 11 HHMKELIRKLTEAFGPSGREEEVRSIILEELEGHIDGHRI-DGLGNLIVWKGS-GEKKVILDAHIDEIGVVVTNVDDKGF 88 (343)
T ss_dssp SCCHHHHHHHHHSCCBTTCCHHHHHHHHHHHTTTCSEEEE-CTTCCEEEEECC-CSSEEEEEEECCBCEEEEEEECTTSC
T ss_pred HHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHhCCEEEE-CCCCCEEEEECC-CCCEEEEEecccccceEEEEECCCCe
Confidence 3467899999999999999999999999999999988776 456799999853 5699999999999943 11
Q ss_pred -----CCCCcc------------------------------------------c----C-------C-------------
Q 014490 122 -----SVEWEH------------------------------------------K----S-------K------------- 130 (423)
Q Consensus 122 -----~~~w~~------------------------------------------~----~-------~------------- 130 (423)
-.+|.. + + +
T Consensus 89 l~~~~vGG~~~~~~~~~~v~i~t~~~Gvig~~~~H~~~~~~~~~~~~~~~l~iD~g~~s~ee~~~~I~vGd~v~~~~~~~ 168 (343)
T 3isx_A 89 LTIEPVGGVSPYMLLGKRIRFENGTIGVVGMEGETTEERQENVRKLSFDKLFIDIGANSREEAQKMCPIGSFGVYDSGFV 168 (343)
T ss_dssp EEEEEESSCCHHHHTTCEEEETTSCEEEEEECCCSHHHHHHHHHTCCGGGEEEECSCSSHHHHHHHSCTTCEEEESCCCE
T ss_pred EEEEecCCcCccccCCcEEEEeccEEEEEecccccccChhhcccCCCcceEEEEeCCCCHHHHHhcCCCCCEEEecCceE
Confidence 113320 0 0 0
Q ss_pred -CCCccccCCc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHhcCCCcccceeeeeccCCCCCCc
Q 014490 131 -VPGKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLFPVG 206 (423)
Q Consensus 131 -~~g~~~grG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~~~~~~~~~~d~~i~~~~~~~~p~g 206 (423)
-++++.|++- +.+++++|.+++.+++ +.+++++|+..|| |..|++.... .. ..|.+++++
T Consensus 169 ~~~~~i~s~~lDdR~g~~~~l~~l~~l~~-----~~~~~~~ft~qEEVG~~Ga~~aa~-~i--~pd~~i~vD-------- 232 (343)
T 3isx_A 169 EVSGKYVSKAMDDRIGCAVIVEVFKRIKP-----AVTLYGVFSVQEEVGLVGASVAGY-GV--PADEAIAID-------- 232 (343)
T ss_dssp EETTEEEESCHHHHHHHHHHHHHHHHCCC-----SSEEEEEEECCCCTTSCCSTTTGG-GC--CCSEEEEEE--------
T ss_pred EeccEEEeccCccHHHHHHHHHHHHhccC-----CCeEEEEEECCcccCchhHHHHhh-cC--CCCEEEEEe--------
Confidence 0244555554 5899999998887742 6899999999999 8888764421 11 123333221
Q ss_pred eEEeecCcccCcceEEEEEEEeCCCCCCC-CCCCCcHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEecCCCCccCCC
Q 014490 207 TVASRPGPTLAAGGFFEAVINGKGGHAAI-PQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPD 285 (423)
Q Consensus 207 ~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~-p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gg~~~n~iP~ 285 (423)
+ +|+.. |....+ ..+ .+..
T Consensus 233 -----------------v------~~a~d~p~~~~~-------------------~~~---------~lg~--------- 252 (343)
T 3isx_A 233 -----------------V------TDSADTPKAIKR-------------------HAM---------RLSG--------- 252 (343)
T ss_dssp -----------------E------EECCCSTTCCCT-------------------TCC---------CTTS---------
T ss_pred -----------------C------cCCCCCCCcccc-------------------ccc---------ccCC---------
Confidence 1 11111 210000 000 0000
Q ss_pred cEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCccccCHHHHHHHHHHHHHhcCCcccccCCCC
Q 014490 286 SVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPL 365 (423)
Q Consensus 286 ~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~g~~~~~~~~~~ 365 (423)
|. .+.. ... ....|+.+.+.+++++++. |.+.... ...
T Consensus 253 ----------------------------------Gp--vI~~--~d~--~~~~d~~l~~~l~~~A~~~-gIp~Q~~-v~~ 290 (343)
T 3isx_A 253 ----------------------------------GP--ALKV--KDR--ASISSKRILENLIEIAEKF-DIKYQME-VLT 290 (343)
T ss_dssp ----------------------------------CC--EEEC--BTT--CCHHHHHHHHHHHHHHHHT-TCCCEEC-CCB
T ss_pred ----------------------------------Cc--EEEE--cCC--CCCCCHHHHHHHHHHHHHC-CCCeEEe-cCC
Confidence 11 1111 111 1234677888888889887 8766322 234
Q ss_pred CCCchHHHHHh--h-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490 366 MGTEDFSFFAE--A-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 366 ~g~tD~~~~~~--~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~ 422 (423)
+|+||++.+.. . +|++.+++|..+ .|++.|+++++++..+++++..++.
T Consensus 291 ggGTDa~~i~~a~~Gipt~~Igvp~r~--------~Hs~~E~~~~~Di~~~~~ll~~~l~ 342 (343)
T 3isx_A 291 FGGTNAMGYQRTREGIPSATVSIPTRY--------VHSPSEMIAPDDVEATVDLLIRYLG 342 (343)
T ss_dssp CCCSSHHHHHHHTSSCCEEEEEEEEBS--------TTSTTEEECHHHHHHHHHHHHHHHC
T ss_pred CCchHHHHHHHhcCCCCEEEEcccccc--------ccchhhEecHHHHHHHHHHHHHHHh
Confidence 68999988754 3 999999888654 8999999999999999999999875
No 45
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=99.64 E-value=2.2e-15 Score=142.60 Aligned_cols=132 Identities=14% Similarity=0.040 Sum_probs=106.1
Q ss_pred HHHHHHHHHhHhCCCC---CCCcHHHHHHHHHHHHhCCCCeEecc-----------cCceEEEEECCCCCcEEEEEEecc
Q 014490 50 YWMVNIRRKIHENPEL---GFQEFETSKLIRAELDQMGIPYKFPV-----------AVTGVVGYIGTGQPPFVALRADMD 115 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~---s~~E~~~~~~l~~~l~~~g~~~~~~~-----------~~~nvia~~~~~~~~~ill~~H~D 115 (423)
+++++.+++|+++... |..+.++++||.++|+++|++++.+. ...||+|++++...+.|+|.+|+|
T Consensus 25 ~~~~~~l~~l~~~~~R~~~s~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~~g~~~~~~Nvia~~~g~~~~~ill~aH~D 104 (309)
T 3tc8_A 25 DSAYAYVANQVAFGPRVPNTAAHKACGDYLASELKRFGAKVYQQEAILTAYDGTKLEARNIIGSFDPENSKRVLLFAHWD 104 (309)
T ss_dssp HHHHHHHHHHHHTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTCSSEEEEEEECC
T ss_pred HHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEEeeccccCCCcccceEEEEEECCCCCceEEEEeccc
Confidence 6677888888776433 44568999999999999999986531 147999999876568999999999
Q ss_pred cccCcCCCCCcccCCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Cc-------------cc
Q 014490 116 ALAMEESVEWEHKSKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG-------------GG 178 (423)
Q Consensus 116 tvp~~~~~~w~~~~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~-------------~G 178 (423)
+||.++. -++. ..++++| +|+ ++|++++|++++.|++.+ ++++|.|+|.++|| |. .|
T Consensus 105 sv~~~~~--~p~~-~~~~~~~-~Ga~D~~sGva~~Le~ar~l~~~~--~~~~i~f~~~~~EE~Gl~~~~~~~~~ds~~~G 178 (309)
T 3tc8_A 105 SRPYSDH--DPDP-SKHRTPL-DGADDGGSGVGALLEIARQIGQKA--PGIGIDIIFFDAEDYGTPEFVTDYTPDSWCLG 178 (309)
T ss_dssp CCSCCTT--CSSG-GGTTSCC-CCTTTTHHHHHHHHHHHHHHHHSC--CSSEEEEEEECSCSCSCCTTCCSCCTTCSCHH
T ss_pred CCCCCCC--Cccc-cCCCccc-cCcccchHhHHHHHHHHHHHHhCC--CCCcEEEEEECccccccccccccccccccchh
Confidence 9997642 2332 3457777 887 589999999999999875 89999999999999 77 89
Q ss_pred HHHHHhcCC
Q 014490 179 AKKMLDAGA 187 (423)
Q Consensus 179 a~~~~~~~~ 187 (423)
++++.++..
T Consensus 179 S~~~~~~~~ 187 (309)
T 3tc8_A 179 TQFWAKNPH 187 (309)
T ss_dssp HHHHHHSCS
T ss_pred HHHHHhCCC
Confidence 999987543
No 46
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=99.62 E-value=3.9e-15 Score=140.97 Aligned_cols=131 Identities=15% Similarity=0.079 Sum_probs=95.4
Q ss_pred HHHHHHHHHhHhCCCCC---CCcHHHHHHHHHHHHhCCCCeEecc-----------cCceEEEEECCCCCcEEEEEEecc
Q 014490 50 YWMVNIRRKIHENPELG---FQEFETSKLIRAELDQMGIPYKFPV-----------AVTGVVGYIGTGQPPFVALRADMD 115 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s---~~E~~~~~~l~~~l~~~g~~~~~~~-----------~~~nvia~~~~~~~~~ill~~H~D 115 (423)
+++++++++|+++++.. ..+.++++||.++|+++|++++.+. ...||+|++++...+.|+|.+|+|
T Consensus 27 ~~~~~~l~~L~~~~~R~~gs~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~~g~~~~~~Nvia~~~g~~~~~ill~aH~D 106 (314)
T 3gux_A 27 DSAYQYIQVQADFGPRVPNTQAHKECGEYLAGQLEKFGAKVYNQYADLIAYDGTILKSRNIIGAYKPESKKRILLCAHWD 106 (314)
T ss_dssp HHHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTCSSEEEEEEECC
T ss_pred HHHHHHHHHHHccCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeeccccCCCcccceEEEEEECCCCCceEEEEcccc
Confidence 77888999999887543 3468899999999999999886521 137999999876568999999999
Q ss_pred cccCcCCCCCcccCCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Cc--------------c
Q 014490 116 ALAMEESVEWEHKSKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG--------------G 177 (423)
Q Consensus 116 tvp~~~~~~w~~~~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~--------------~ 177 (423)
+||.++.. |+ ...++. +++|+ ++|++++|++++.|++.+ ++++|.|++.++|| |. .
T Consensus 107 sv~~~~~~--p~-~~~~~~-~~~GA~D~~sGva~~Le~ar~l~~~~--~~~~i~fv~~~~EE~Gl~~~~~~~~~~ds~~~ 180 (314)
T 3gux_A 107 SRPYADND--PD-PKNHHT-PILGVNDGASGVGVLLEIARQIQKEQ--PALGIDIVFFDSEDYGIPEFYDGKYKQDTWCL 180 (314)
T ss_dssp CCC------------------------CHHHHHHHHHHHHHHHHSC--CSSEEEEEEECSCCC-----------CTTSCH
T ss_pred CCCcCCCC--cc-cccCCc-ccCCCcccHHHHHHHHHHHHHHHhCC--CCCcEEEEEECCccccccccccccccccccch
Confidence 99976421 22 122333 45887 689999999999999875 88999999999999 77 8
Q ss_pred cHHHHHhcC
Q 014490 178 GAKKMLDAG 186 (423)
Q Consensus 178 Ga~~~~~~~ 186 (423)
|++++.++.
T Consensus 181 GS~~~~~~~ 189 (314)
T 3gux_A 181 GSQYWARTP 189 (314)
T ss_dssp HHHHHHHSC
T ss_pred hHHHHHhCC
Confidence 999998754
No 47
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=99.53 E-value=2.7e-14 Score=136.74 Aligned_cols=126 Identities=14% Similarity=0.202 Sum_probs=99.4
Q ss_pred HHH-HHHHHHhHhCCCCC-CCcHHHHHHHHHHHHh--CCCCeEecc----------cCceEEEEECCCCCcEEEEEEecc
Q 014490 50 YWM-VNIRRKIHENPELG-FQEFETSKLIRAELDQ--MGIPYKFPV----------AVTGVVGYIGTGQPPFVALRADMD 115 (423)
Q Consensus 50 ~~~-~~~~~~l~~ips~s-~~E~~~~~~l~~~l~~--~g~~~~~~~----------~~~nvia~~~~~~~~~ill~~H~D 115 (423)
+++ .+++++|+..+.++ ..+.++++||.++|++ +|++++.+. ...||+|++++...+.|+|.||+|
T Consensus 31 ~~~~~~~l~~L~~~r~~~s~~~~~~~~~l~~~l~~~~~G~~v~~~~~~~~~~~g~~~~~Nvi~~~~g~~~~~i~l~aH~D 110 (329)
T 2afw_A 31 SEMWQNDLQPLLIERYPGSPGSYAARQHIMQRIQRLQADWVLEIDTFLSQTPYGYRSFSNIISTLNPTAKRHLVLACHYD 110 (329)
T ss_dssp HHHHHHTTGGGCSCCCTTSHHHHHHHHHHHHHHHTSSSCCEEEEEEEEECCTTSSEEEEEEEEESSTTSSEEEEEEEECC
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHhhCCCCEEEEEEEEecCCCCCceEeEEEEEECCCCCcEEEEEEecc
Confidence 667 88888887555443 2356789999999999 999876632 257999999766568999999999
Q ss_pred cccCcCCCCCcccCCCCCccccCCc---hHHHHHHHHHHHHHHhc--------cccCCceEEEEEecCCCC---------
Q 014490 116 ALAMEESVEWEHKSKVPGKMHACGH---DAHVAMLLGAAKMLQVF--------RHEIKGTIVLVFQPAEEG--------- 175 (423)
Q Consensus 116 tvp~~~~~~w~~~~~~~g~~~grG~---k~~~a~~l~a~~~l~~~--------~~~~~~~i~~~~~~~EEg--------- 175 (423)
+||.+ .|. |++ |+|+ ++|+|++|++++.|++. +..++++|.|+|..+||.
T Consensus 111 sv~~~---~~~------~~~-~~Ga~D~~sGva~~le~ar~l~~~~~~~~~~~g~~~~~~i~~~~~~~EE~~~~~~~~~g 180 (329)
T 2afw_A 111 SKYFS---HWN------NRV-FVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGEEAFLHWSPQDS 180 (329)
T ss_dssp CCCCC---CBT------TBC-CCCTTTTHHHHHHHHHHHHHTHHHHHTTC------CCEEEEEEEESCCSCSSSCCSSSS
T ss_pred CCCcC---ccc------CcC-CCCcccchhhHHHHHHHHHHHHHHHhhhcccccCCCCccEEEEEecCcccccccCCCcc
Confidence 99975 352 454 7887 68999999999999876 246889999999999994
Q ss_pred cccHHHHHhc
Q 014490 176 GGGAKKMLDA 185 (423)
Q Consensus 176 ~~Ga~~~~~~ 185 (423)
..|+++++++
T Consensus 181 l~Gs~~~~~~ 190 (329)
T 2afw_A 181 LYGSRHLAAK 190 (329)
T ss_dssp CHHHHHHHHH
T ss_pred chhHHHHHHH
Confidence 4799998764
No 48
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=99.39 E-value=9.6e-12 Score=117.97 Aligned_cols=131 Identities=15% Similarity=0.131 Sum_probs=98.8
Q ss_pred HHHHHHHHHhHhC-CCCCCCc--HHHHHHHHHHHHhCCCCeEec-------c----cCceEEEEECCCCCcEEEEEEecc
Q 014490 50 YWMVNIRRKIHEN-PELGFQE--FETSKLIRAELDQMGIPYKFP-------V----AVTGVVGYIGTGQPPFVALRADMD 115 (423)
Q Consensus 50 ~~~~~~~~~l~~i-ps~s~~E--~~~~~~l~~~l~~~g~~~~~~-------~----~~~nvia~~~~~~~~~ill~~H~D 115 (423)
+...+.++.++++ |.+.+.+ .++++||.++|+++|++++.+ . ...|||+++++...+.|+|.+|+|
T Consensus 25 ~~a~~~l~~l~~fgpR~~gS~~~~~a~~~i~~~l~~~g~~v~~q~~~~~~~~~~~~~~~Nii~~~~g~~~~~i~l~aH~D 104 (309)
T 4fuu_A 25 DSAYLYVKNQVDFGPRVPNTKEHVACGNYLAGKLEAFGAKVTNQYADLIAYDGTLLKARNIIGSYKPESKKRIALFAHWD 104 (309)
T ss_dssp HHHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTCSSEEEEEEECC
T ss_pred HHHHHHHHHHhCcCCcCCCCHHHHHHHHHHHHHHHHcCCeeEEEeEEeccCCCCcceeEEEEEEECCCCCceEEEEeecC
Confidence 6778888888875 5555543 788999999999999988652 1 235999999877668999999999
Q ss_pred cccCcCCCCCcccCCCCCccccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Cc--------------c
Q 014490 116 ALAMEESVEWEHKSKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG--------------G 177 (423)
Q Consensus 116 tvp~~~~~~w~~~~~~~g~~~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~--------------~ 177 (423)
++|..+...... ++.....|+ -+|+|++|++++.|.+. .++.+|.|+|..+|| |. .
T Consensus 105 s~~~~~~~~~~~----~~~~~~~GA~D~aSG~a~lLE~ar~l~~~--~~~~~i~~~~~~~EE~Gl~~~~~~~~~~~~~l~ 178 (309)
T 4fuu_A 105 TRPWADNDADEK----NHHTPILGANDGASGVGALLEIARLVNQQ--QPELGIDIIFLDAEDYGTPQFYEGKHKEEAWCL 178 (309)
T ss_dssp CCSCCTTCSSGG----GTTSCCCCTTTTHHHHHHHHHHHHHHHHS--CCSSEEEEEEECSSSCCCCTTCCSCCCGGGSCH
T ss_pred CCCCCCCccccc----cccCCcCCcccCchhHHHHHHHHHHHhhc--CCCCceEEEeecccccCccccccchhhhhhhhc
Confidence 998764321111 122234566 37999999999999875 488999999999999 63 5
Q ss_pred cHHHHHhcC
Q 014490 178 GAKKMLDAG 186 (423)
Q Consensus 178 Ga~~~~~~~ 186 (423)
|++++++..
T Consensus 179 GS~~~~~~~ 187 (309)
T 4fuu_A 179 GSQYWSRNP 187 (309)
T ss_dssp HHHHHHHSC
T ss_pred chhHHHhcc
Confidence 788887653
No 49
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=99.34 E-value=1.3e-11 Score=117.30 Aligned_cols=123 Identities=21% Similarity=0.255 Sum_probs=94.4
Q ss_pred HHHHHHHHHhHhCCCCCCCc--HHHHHHHHHHHHhCCCCeEecc-----------cCceEEEEECCCCCcEEEEEEeccc
Q 014490 50 YWMVNIRRKIHENPELGFQE--FETSKLIRAELDQMGIPYKFPV-----------AVTGVVGYIGTGQPPFVALRADMDA 116 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~~E--~~~~~~l~~~l~~~g~~~~~~~-----------~~~nvia~~~~~~~~~ill~~H~Dt 116 (423)
..+-++|+.+. +|.+.+.+ .++++||.++|+++|++++.+. ...||||++++...+.|++.+|+|+
T Consensus 11 ~~~~~~l~~il-~PR~~gs~~~~~~~~~i~~~l~~~g~~v~~~~f~~~~~~~~~~~~~Nii~~~~~~~~~~vvl~aHyDs 89 (312)
T 4f9u_A 11 VHFNRTLDSIL-VPRVVGSRGHQQVREYLVQSLNGLGFQTEVDEFKQRVPVFGELTFANVVGTINPQAQNFLALACHYDS 89 (312)
T ss_dssp HHHHHHHHHHC-SCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTEEEEEEEEEEEESTTSSEEEEEEEECCC
T ss_pred HHHHHHHHHhc-CCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEeEEEecCCCCceeEEEEEEEECCCCCceEEEEEEEec
Confidence 44555566654 67776654 7899999999999999886521 1359999998776689999999999
Q ss_pred ccCcCCCCCcccCCCCCccccCCc---hHHHHHHHHHHHHHHhc-----cccCCceEEEEEecCCC-C--------cccH
Q 014490 117 LAMEESVEWEHKSKVPGKMHACGH---DAHVAMLLGAAKMLQVF-----RHEIKGTIVLVFQPAEE-G--------GGGA 179 (423)
Q Consensus 117 vp~~~~~~w~~~~~~~g~~~grG~---k~~~a~~l~a~~~l~~~-----~~~~~~~i~~~~~~~EE-g--------~~Ga 179 (423)
.+..+. --..|+ -+|+|++|++++.|.+. +..++++|.|+|..+|| | ..|+
T Consensus 90 ~~~~~~------------~~~~GA~DnaSGvA~lLElAR~l~~~~~~~~~~~p~~tI~fv~fdaEE~G~~~~~~~~L~GS 157 (312)
T 4f9u_A 90 KYFPND------------PGFVGATDSAVPCAILLNTAKTLGAYLQKEFRNRSDVGLMLIFFDGEEAFKEWTDADSVYGS 157 (312)
T ss_dssp CCCTTC------------TTCCCTTTTHHHHHHHHHHHHHTHHHHTTGGGSCSSEEEEEEEESCCSCSSSCSSSSSCHHH
T ss_pred CCCCCC------------CCCCCccCCcccHHHHHHHHHHHHHHHHhhccCCCCceEEEEEecCccccccCCccccccCh
Confidence 875421 123465 37999999999999753 34688999999999999 6 5799
Q ss_pred HHHHhc
Q 014490 180 KKMLDA 185 (423)
Q Consensus 180 ~~~~~~ 185 (423)
++++++
T Consensus 158 ~~~a~~ 163 (312)
T 4f9u_A 158 KHLAAK 163 (312)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998764
No 50
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=99.28 E-value=3e-11 Score=114.85 Aligned_cols=124 Identities=18% Similarity=0.215 Sum_probs=92.8
Q ss_pred HHHHH-HHHHhHhCCCCCC--CcHHHHHHHHHHHHhC--CCCeEeccc----------CceEEEEECCCCCcEEEEEEec
Q 014490 50 YWMVN-IRRKIHENPELGF--QEFETSKLIRAELDQM--GIPYKFPVA----------VTGVVGYIGTGQPPFVALRADM 114 (423)
Q Consensus 50 ~~~~~-~~~~l~~ips~s~--~E~~~~~~l~~~l~~~--g~~~~~~~~----------~~nvia~~~~~~~~~ill~~H~ 114 (423)
+++.+ +++.+ -+|...+ .+.++++||.++|+++ |++++.+.- ..||+|+++++..+.|++.+|+
T Consensus 39 ~~~~~~~L~~~-~~~R~~gS~~~~~a~~~l~~~l~~~~~g~~v~~d~f~~~~~~g~~~~~Nvia~~~g~~~~~ivl~aH~ 117 (330)
T 3pb6_X 39 QRLWSTYLRPL-LVVRTPGSPGNLQVRKFLEATLRSLTAGWHVELDPFTASTPLGPVDFGNVVATLDPRAARHLTLACHY 117 (330)
T ss_dssp HHHHHHTTGGG-CSCCCTTSHHHHHHHHHHHHHHHHSTTCCEEEEEEEEEEETTEEEEEEEEEEESCTTSSEEEEEEEEC
T ss_pred HHHHHHHHHHH-hCCCCCCCHHHHHHHHHHHHHHHHhCCCCeEEEEeeecccccCCccceEEEEEECCCCCceEEEEecc
Confidence 44544 45555 3444443 4578999999999999 887765321 3799999977656899999999
Q ss_pred ccccCcCCCCCcccCCCCCccccCCc---hHHHHHHHHHHHHHHhc-----cccCCceEEEEEecCCCC--------c-c
Q 014490 115 DALAMEESVEWEHKSKVPGKMHACGH---DAHVAMLLGAAKMLQVF-----RHEIKGTIVLVFQPAEEG--------G-G 177 (423)
Q Consensus 115 Dtvp~~~~~~w~~~~~~~g~~~grG~---k~~~a~~l~a~~~l~~~-----~~~~~~~i~~~~~~~EEg--------~-~ 177 (423)
|+|+..+ |.....|+ .+|++++|++++.|++. +..++.+|.|+|..+||+ + .
T Consensus 118 Dsv~~~~-----------g~~~~~GA~D~asGva~lLe~ar~l~~~~~~~~~~~~~~~i~fv~~~~EE~f~~w~~~~gl~ 186 (330)
T 3pb6_X 118 DSKLFPP-----------GSTPFVGATDSAVPCALLLELAQALDLELSRAKKQAAPVTLQLLFLDGEEALKEWGPKDSLY 186 (330)
T ss_dssp CCCCCCT-----------TSCCCCCTTTTHHHHHHHHHHHHHTHHHHHHHHHTTCSEEEEEEEESCCSCSSCCSTTSSCH
T ss_pred CCCCCCC-----------CCcCcCCCcCChHHHHHHHHHHHHHHHHHhhcccCCCCCcEEEEEEcCcccccccCCCCCCc
Confidence 9998422 21245565 47999999999999873 357899999999999996 4 7
Q ss_pred cHHHHHhc
Q 014490 178 GAKKMLDA 185 (423)
Q Consensus 178 Ga~~~~~~ 185 (423)
|++++.++
T Consensus 187 GS~~~a~~ 194 (330)
T 3pb6_X 187 GSRHLAQL 194 (330)
T ss_dssp HHHHHHHH
T ss_pred cHHHHHHH
Confidence 99998763
No 51
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=99.27 E-value=9.5e-11 Score=111.97 Aligned_cols=134 Identities=19% Similarity=0.224 Sum_probs=99.3
Q ss_pred hHHHHhhcCchhHHHHHHHHHHhHhCCCCCCCc--HHHHHHHHHHHHhCCCCeEec-----------ccCceEEEEECCC
Q 014490 37 VKFLDFAKKPEIFYWMVNIRRKIHENPELGFQE--FETSKLIRAELDQMGIPYKFP-----------VAVTGVVGYIGTG 103 (423)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~E--~~~~~~l~~~l~~~g~~~~~~-----------~~~~nvia~~~~~ 103 (423)
.++++..+... ...+.++++.|. +|.+.|.+ .++++||.++|+++|++++.+ ....||||+++++
T Consensus 26 ~~~~~~~~~~~-~~~~~~~l~~il-~pR~~Gs~~~~~~~~~i~~~l~~~g~~v~~q~f~~~~~~~~~~~~~Nii~~~~~~ 103 (330)
T 4fai_A 26 PRFLEYSNLSD-KLHLREAIDKIL-IPRVVGTTNHSIVREYIVQSLRDLDWDVEVNSFHDHAPIKGKLHFHNIIATLNPN 103 (330)
T ss_dssp HHHHHHHTCCC-HHHHHHHHHHHC-SCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTEEEEEEEEEEESCTT
T ss_pred HHHHhcccccH-HHHHHHHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHCCCEEEEeeeeeecCCCCceeEEEEEEEECCC
Confidence 34555444432 155666666664 67777665 779999999999999988652 1235999999776
Q ss_pred CCcEEEEEEecccccCcCCCCCcccCCCCCccccCCc---hHHHHHHHHHHHHHHhc---cccCCceEEEEEecCCC-Cc
Q 014490 104 QPPFVALRADMDALAMEESVEWEHKSKVPGKMHACGH---DAHVAMLLGAAKMLQVF---RHEIKGTIVLVFQPAEE-GG 176 (423)
Q Consensus 104 ~~~~ill~~H~Dtvp~~~~~~w~~~~~~~g~~~grG~---k~~~a~~l~a~~~l~~~---~~~~~~~i~~~~~~~EE-g~ 176 (423)
....|++.+|+|+++..+ . ...|+ -+|+|++|++++.|++. +.+++++|.|+|..+|| |.
T Consensus 104 ~~~~i~l~aHyDs~~~~~-----------~--~~~GA~DnasG~A~lLE~Ar~l~~~~~~~~~p~rtI~fv~fdgEE~Gl 170 (330)
T 4fai_A 104 AERYLVLSCHYDSKYMPG-----------V--EFLGATDSAVPCAMLLNLAQVLQEQLKPLKKSKLSLMLLFFDGEEAFE 170 (330)
T ss_dssp CSEEEEEEEECCCCCCTT-----------S--CCCCTTTTHHHHHHHHHHHHHTHHHHGGGGTSSEEEEEEEESCCSCSS
T ss_pred CCcEEEEEEeeccccccc-----------C--CCCCCCCccHhHHHHHHHHHHHHHhhhccCCCCccEEEEEeccccccc
Confidence 667899999999987542 1 13466 37999999999999753 45688999999999999 63
Q ss_pred --------ccHHHHHhc
Q 014490 177 --------GGAKKMLDA 185 (423)
Q Consensus 177 --------~Ga~~~~~~ 185 (423)
.|++++.+.
T Consensus 171 ~~~~~~~llGS~~~a~~ 187 (330)
T 4fai_A 171 EWGPKDSIYGARHLAKK 187 (330)
T ss_dssp SCBTTBSCHHHHHHHHH
T ss_pred cccccchhhhhHHHHhc
Confidence 599998864
No 52
>1q7l_B Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=99.00 E-value=2e-10 Score=87.55 Aligned_cols=74 Identities=16% Similarity=0.195 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhh-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHH
Q 014490 341 NLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHAS 419 (423)
Q Consensus 341 ~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~ 419 (423)
++++.++++++++ |.++ .+...+|+||+++|... +|++.+ ||.+. +...+|++||+|++++|.+++++|+.
T Consensus 2 ~~v~~l~~a~~~~-g~~~--~~~~~~g~TDar~~~~~gip~v~f--GPg~~---~~~~~H~~dE~v~i~~l~~~~~iy~~ 73 (88)
T 1q7l_B 2 PWWAAFSRVCKDM-NLTL--EPEIMPAAGDNRYIRAVGVPALGF--SPMNR---TPVLLHDHDERLHEAVFLRGVDIYTR 73 (88)
T ss_dssp HHHHHHHHHHHHT-TCCE--EEEECCSCSHHHHHHHTTCCEEEE--CCCCS---CCCCTTSTTCEEEHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHc-CCee--EeeeeceeCcHHHHHHcCCCEEEE--CCCCC---CcccccCCCCeeEHHHHHHHHHHHHH
Confidence 6889999999998 8776 45688999999999887 887655 52221 12479999999999999999999999
Q ss_pred HHh
Q 014490 420 LAT 422 (423)
Q Consensus 420 ~i~ 422 (423)
++.
T Consensus 74 ~i~ 76 (88)
T 1q7l_B 74 LLP 76 (88)
T ss_dssp HHH
T ss_pred HHH
Confidence 885
No 53
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=98.82 E-value=1.1e-08 Score=101.68 Aligned_cols=100 Identities=24% Similarity=0.251 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHHhCC-CCeEe--------cccCceEEEEECCCC--CcEEEEEEecccccCcCCCCCcccCCCCCccccC
Q 014490 70 FETSKLIRAELDQMG-IPYKF--------PVAVTGVVGYIGTGQ--PPFVALRADMDALAMEESVEWEHKSKVPGKMHAC 138 (423)
Q Consensus 70 ~~~~~~l~~~l~~~g-~~~~~--------~~~~~nvia~~~~~~--~~~ill~~H~Dtvp~~~~~~w~~~~~~~g~~~gr 138 (423)
.+.++.|.+.|+.-. ++++. .....||++++++.. .+.|++.+|+|+++. |+
T Consensus 203 ~~da~~L~~~l~~g~~~~v~l~~~~~~~~~~~~~Nvi~~~~g~~~~~~~i~~~aH~Ds~~~-----------------g~ 265 (444)
T 3iib_A 203 NPDADLINAMLKRDKEVVISLELGSERRGETTSYNVIAEVKGSTKADEIVLIGAHLDSWDE-----------------GT 265 (444)
T ss_dssp HHHHHHHHHHHTTTCCCEEEEEEEEEEEEEEEEEEEEEEECCSTEEEEEEEEEEECCCCSS-----------------SC
T ss_pred HHHHHHHHHHHhCCCCeEEEEEEeeeEcCCceeEEEEEEEeCCCCCCCEEEEEeecccCCC-----------------CC
Confidence 455677777775421 22221 123579999997653 588999999999984 34
Q ss_pred Cc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHhcC
Q 014490 139 GH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAG 186 (423)
Q Consensus 139 G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~~~~~ 186 (423)
|+ ++|++++|++++.|++.+..++++|+|+|.++|| |..|+++++++.
T Consensus 266 Ga~D~~sG~a~~le~a~~l~~~~~~~~~~i~f~~~~~EE~gl~Gs~~~~~~~ 317 (444)
T 3iib_A 266 GAIDDGAGVAIVTAAAKHILDLPQKPERTIRVVLYAAEELGLLGGKTYAKEH 317 (444)
T ss_dssp CTTTTHHHHHHHHHHHHHHHTSSSCCSEEEEEEEESCGGGTSHHHHHHHHHT
T ss_pred CCccchHHHHHHHHHHHHHHhcCCCCCCeEEEEEECCcccCCcCHHHHHHhh
Confidence 54 5899999999999999887899999999999999 889999998764
No 54
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=98.80 E-value=1.4e-08 Score=100.39 Aligned_cols=97 Identities=18% Similarity=0.206 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHH---h--CCCCeEec----ccCceEEEEECCC-----CCcEEEEEEecccccCcCCCCCcccCCCCCcc
Q 014490 70 FETSKLIRAELD---Q--MGIPYKFP----VAVTGVVGYIGTG-----QPPFVALRADMDALAMEESVEWEHKSKVPGKM 135 (423)
Q Consensus 70 ~~~~~~l~~~l~---~--~g~~~~~~----~~~~nvia~~~~~-----~~~~ill~~H~Dtvp~~~~~~w~~~~~~~g~~ 135 (423)
.+.+++|.++++ + .++++..+ ....||++++++. +.+.|++.+|+|+|+.
T Consensus 171 ~~~a~~L~~~l~~~~~g~~~v~l~~~~~~~~~~~Nvi~~~~g~~~~~~~~~~v~~~aH~D~v~~---------------- 234 (421)
T 2ek8_A 171 KQEGDALAANLRAGEKITATVKVAGAEVKTLTSHNVIATKKPDANKKNTNDIIIIGSHHDSVEK---------------- 234 (421)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEEEESCEEEEEEEEEEEEEECCCSSTTCCCCEEEEEEECCCCTT----------------
T ss_pred HHHHHHHHHHhhhhccCCccccccccccccccccceEEEecCcccCCCCCCEEEEecccccCCC----------------
Confidence 345777888883 2 12222211 1257999999663 3589999999999983
Q ss_pred ccCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHhc
Q 014490 136 HACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDA 185 (423)
Q Consensus 136 ~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~~~~~~ 185 (423)
|+|+ ++|++++|++++.|++. .++++|+|++.++|| |..|+++++++
T Consensus 235 -g~Ga~D~~~G~a~~le~~~~l~~~--~~~~~i~~~~~~~EE~g~~Gs~~~~~~ 285 (421)
T 2ek8_A 235 -APGANDDASGVAVTLELARVMSKL--KTDTELRFITFGAEENGLIGSKKYAAS 285 (421)
T ss_dssp -CCCTTTTHHHHHHHHHHHHHHTTS--CCSSEEEEEEESSSTTTSHHHHHHHTT
T ss_pred -CCCCCCCcHhHHHHHHHHHHHhcc--CCCceEEEEEECCccccchhHHHHHHh
Confidence 4565 68999999999999874 478999999999999 88999999875
No 55
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=98.19 E-value=3.7e-06 Score=86.52 Aligned_cols=79 Identities=22% Similarity=0.259 Sum_probs=64.2
Q ss_pred cCceEEEEECCC--CCcEEEEEEecccccCcCCCCCcccCCCCCccccCCchHHHHHHHHHHHHHHhc----cccCCceE
Q 014490 92 AVTGVVGYIGTG--QPPFVALRADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVF----RHEIKGTI 165 (423)
Q Consensus 92 ~~~nvia~~~~~--~~~~ill~~H~Dtvp~~~~~~w~~~~~~~g~~~grG~k~~~a~~l~a~~~l~~~----~~~~~~~i 165 (423)
...||+|++++. +.+.|++.+|+|++..|. ....+|++++|++++.|++. +.+++++|
T Consensus 265 ~~~NVi~~i~G~~~~~~~vvvgaH~Ds~~~Ga----------------~D~~sG~a~lLe~ar~l~~~~~~~g~~p~r~I 328 (640)
T 3kas_A 265 KILNIFGVIKGFVEPDHYVVVGAQRDAWGPGA----------------AKSGVGTALLLKLAQMFSDMVLKDGFQPSRSI 328 (640)
T ss_dssp EEEEEEEEECCSSEEEEEEEEEEECCCSSCCT----------------TTTHHHHHHHHHHHHHHHHHHHTSCCCCSEEE
T ss_pred eEEEEEEEEeCCcCCCCceeeecccCCCCCCC----------------CcCcHHHHHHHHHHHHHHHhhhhcCCCCCCcE
Confidence 357999999776 257899999999974221 01147999999999999864 56899999
Q ss_pred EEEEecCCC-CcccHHHHHhcC
Q 014490 166 VLVFQPAEE-GGGGAKKMLDAG 186 (423)
Q Consensus 166 ~~~~~~~EE-g~~Ga~~~~~~~ 186 (423)
+|++..+|| |..|+++++++.
T Consensus 329 ~f~~~~~EE~gl~GS~~~~~~~ 350 (640)
T 3kas_A 329 IFASWSAGDFGSVGATEWLEGY 350 (640)
T ss_dssp EEEEESSGGGTSHHHHHHHHHT
T ss_pred EEEEECCcccCchhHHHHHHhh
Confidence 999999999 889999998864
No 56
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=98.15 E-value=3.5e-06 Score=87.61 Aligned_cols=77 Identities=26% Similarity=0.277 Sum_probs=63.4
Q ss_pred CceEEEEECCCC--CcEEEEEEecccccCcCCCCCcccCCCCCccccCCchHHHHHHHHHHHHHHh---ccccCCceEEE
Q 014490 93 VTGVVGYIGTGQ--PPFVALRADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQV---FRHEIKGTIVL 167 (423)
Q Consensus 93 ~~nvia~~~~~~--~~~ill~~H~Dtvp~~~~~~w~~~~~~~g~~~grG~k~~~a~~l~a~~~l~~---~~~~~~~~i~~ 167 (423)
..||+|++++.. .+.|++.+|+|+++. | |-...+|++++|++++.|.+ .+.+++++|+|
T Consensus 312 ~~NVi~~i~G~~~~~~~vllgaH~Ds~~~-------------G---a~D~~sG~a~lLe~ar~l~~~~~~g~~p~r~I~f 375 (707)
T 3fed_A 312 IYNVVGTIRGSVEPDRYVILGGHRDSWVF-------------G---AIDPTSGVAVLQEIARSFGKLMSKGWRPRRTIIF 375 (707)
T ss_dssp EEEEEEEECCSSEEEEEEEEEEECCCSSS-------------C---TTTTHHHHHHHHHHHHHHHHHHHTTCCCSEEEEE
T ss_pred EEEEEEEEeCCCCCCceEEEeccccCCCC-------------C---CccCcHHHHHHHHHHHHHHhhhhccCCCCCCEEE
Confidence 569999998763 588999999999872 2 11225799999999999976 35679999999
Q ss_pred EEecCCC-CcccHHHHHhc
Q 014490 168 VFQPAEE-GGGGAKKMLDA 185 (423)
Q Consensus 168 ~~~~~EE-g~~Ga~~~~~~ 185 (423)
++..+|| |..|+++++++
T Consensus 376 ~~~~~EE~Gl~GS~~~~~~ 394 (707)
T 3fed_A 376 ASWDAEEFGLLGSTEWAEE 394 (707)
T ss_dssp EEESCGGGTSHHHHHHHHH
T ss_pred EEeCCccccchhHHHHHHh
Confidence 9999999 88999999875
No 57
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=94.40 E-value=0.026 Score=55.07 Aligned_cols=77 Identities=10% Similarity=-0.052 Sum_probs=59.9
Q ss_pred ccCHHHHHHHHHHHHHhcCCcccccCCC--CCCCchHHHHHh--h-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchH
Q 014490 337 VNNKNLHEHFQKVAADMLGVQNIKENRP--LMGTEDFSFFAE--A-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALP 411 (423)
Q Consensus 337 ~~d~~~~~~l~~~~~~~~g~~~~~~~~~--~~g~tD~~~~~~--~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~ 411 (423)
..|..+...+++++++. |.+....... .+|+||++.+.. . +|++.+|++... .|++.|.++.+++.
T Consensus 342 ~~~~~~~~~l~~~a~~~-~Ip~Q~~~~~~d~~gGsd~g~i~~~~~Gi~tvdiGip~~~--------mHS~~E~~~~~D~~ 412 (428)
T 2ijz_A 342 ATNSETAGFFRHLCQDS-EVPVQSFVTRSDMGCGSTIGPITASQVGVRTVDIGLPTFA--------MHSIRELAGSHDLA 412 (428)
T ss_dssp SCCHHHHTTTTHHHHHT-CCCCCBCCCCSSCCCCCCCSTTTGGGGSCCEEEECCCCCS--------CSSSSCCCCSSHHH
T ss_pred CCCHHHHHHHHHHHHHc-CCCeEEEEEeCCCCccchHHHHHHhCCCCCEEEEchhhcc--------cchHHHHhhHHHHH
Confidence 36788999999999988 8865332221 567788777643 3 898888776543 89999999999999
Q ss_pred HHHHHHHHHHh
Q 014490 412 YGAALHASLAT 422 (423)
Q Consensus 412 ~~~~~~~~~i~ 422 (423)
..++++..++.
T Consensus 413 ~~~~ll~af~~ 423 (428)
T 2ijz_A 413 HLVKVLGAFYA 423 (428)
T ss_dssp HHHTTHHHHTT
T ss_pred HHHHHHHHHHh
Confidence 99999999875
No 58
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=93.74 E-value=0.03 Score=55.19 Aligned_cols=77 Identities=12% Similarity=-0.073 Sum_probs=58.2
Q ss_pred ccCHHHHHHHHHHHHHhcCCcccccCCC----CCCCchHHHHHhh-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchH
Q 014490 337 VNNKNLHEHFQKVAADMLGVQNIKENRP----LMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALP 411 (423)
Q Consensus 337 ~~d~~~~~~l~~~~~~~~g~~~~~~~~~----~~g~tD~~~~~~~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~ 411 (423)
..|..+...+++++++. |.+......+ .+|+|++..+.+. +|++.++++... .|++.|.++.+++.
T Consensus 376 ~~~~~~~~~l~~~a~~~-~Ip~Q~~~~~r~d~~~GgT~~~~~a~~Gi~tvdiGiP~~~--------mHS~~E~~~~~Di~ 446 (458)
T 1y7e_A 376 DADAELVSYIRQLLNKN-NIAWQVATLGKVEEGGGGTVAKFLAGYGIRTIDMGPAVIS--------MHSPMEITSKFDLY 446 (458)
T ss_dssp --CHHHHHHHHHHHHHH-TCCEEEEEECC-----CHHHHHHHHHHTCEEEEECCEEBS--------TTSSSEEEEHHHHH
T ss_pred cCCHHHHHHHHHHHHHc-CCCeEEEEeeccCCCCcCcHHHHHhCCCCCEEEEchhhcc--------cchHHHHhhHHHHH
Confidence 34788999999999998 8865332121 4577777667665 998888777544 89999999999999
Q ss_pred HHHHHHHHHHh
Q 014490 412 YGAALHASLAT 422 (423)
Q Consensus 412 ~~~~~~~~~i~ 422 (423)
..++++..++.
T Consensus 447 ~~~~ll~af~~ 457 (458)
T 1y7e_A 447 NAYLAYKAFYR 457 (458)
T ss_dssp HHHHHHHHTTT
T ss_pred HHHHHHHHHHh
Confidence 99999998875
No 59
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=93.71 E-value=0.098 Score=51.70 Aligned_cols=76 Identities=14% Similarity=-0.047 Sum_probs=59.7
Q ss_pred cCHHHHHHHHHHHHHhcCCcccccCC---CCCCCchHHHHHh-h-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHH
Q 014490 338 NNKNLHEHFQKVAADMLGVQNIKENR---PLMGTEDFSFFAE-A-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPY 412 (423)
Q Consensus 338 ~d~~~~~~l~~~~~~~~g~~~~~~~~---~~~g~tD~~~~~~-~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~ 412 (423)
.|+.+...+++++++. |.+...... ..+|+|++..... . +|++.++++... .|++.|-++..|+..
T Consensus 404 t~~~~~~~l~~ia~~~-~Ip~Q~~v~r~D~~gGgTig~i~~s~~Gi~tvdIGiP~ry--------MHS~~E~~~~~D~~~ 474 (496)
T 3vat_A 404 SNAVSEALIREVASSV-GVPLQDLMVRNDSPCGTTIGPILASRLGLRVLDLGSPQLA--------MHSIRETACTTGVLQ 474 (496)
T ss_dssp CCHHHHHHHHHHHHHH-TCCCEEECCCTTSCCCCCHHHHHHHHHTCEEEEEECEEES--------TTSSSEEEESHHHHH
T ss_pred cCHHHHHHHHHHHHHc-CCCEEEEEecCCCCCcchHHHHHhcccCCcEEEecHhhhc--------cccHHHHhhHHHHHH
Confidence 4788999999999988 875532211 1467888876653 3 999988888655 899999999999999
Q ss_pred HHHHHHHHHh
Q 014490 413 GAALHASLAT 422 (423)
Q Consensus 413 ~~~~~~~~i~ 422 (423)
+++++..++.
T Consensus 475 ~v~Ll~af~~ 484 (496)
T 3vat_A 475 TITLFKGFFE 484 (496)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998874
No 60
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}
Probab=93.40 E-value=0.51 Score=45.37 Aligned_cols=72 Identities=17% Similarity=0.056 Sum_probs=52.0
Q ss_pred CceEEEEE--CCCCCcEEEEEEecccccCcCCCCCcccCCCCCccccCCchHHHHHHHHHHHHHHhccccCCceEEEEEe
Q 014490 93 VTGVVGYI--GTGQPPFVALRADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQ 170 (423)
Q Consensus 93 ~~nvia~~--~~~~~~~ill~~H~Dtvp~~~~~~w~~~~~~~g~~~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~ 170 (423)
+..-++++ +|...+.|+|.+|+|+ |-. +-..-+|+|++++.+++|++. .++.++.|+|.
T Consensus 165 G~l~y~e~~ipG~t~~~IllsaH~cH-P~~----------------ANDNaSG~a~lleLar~l~~~--~~~~t~rFvf~ 225 (435)
T 3k9t_A 165 GSLTYGEYYIRGELEEEILLTTYTCH-PSM----------------CNDNLSGVALITFIAKALSKL--KTKYSYRFLFA 225 (435)
T ss_dssp CEEEEEEEEECCSSSCEEEEEEECCC-CSC----------------TTTTHHHHHHHHHHHHHHTTS--CCSSEEEEEEE
T ss_pred CceEEEEEEecCCCCCEEEEEEEcCC-CCC----------------CCccchHHHHHHHHHHHHhcC--CCCceEEEEEc
Confidence 33445555 6655699999999997 410 111137899999999999864 48899999999
Q ss_pred cCCCCcccHHHHHhcC
Q 014490 171 PAEEGGGGAKKMLDAG 186 (423)
Q Consensus 171 ~~EEg~~Ga~~~~~~~ 186 (423)
++ ..|+..++.+.
T Consensus 226 pg---~iGS~~yl~~~ 238 (435)
T 3k9t_A 226 PE---TIGSITWLSRN 238 (435)
T ss_dssp CT---THHHHHHHHHC
T ss_pred Cc---cHHHHHHHHhC
Confidence 83 36888887653
No 61
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=92.80 E-value=0.16 Score=49.85 Aligned_cols=76 Identities=16% Similarity=0.012 Sum_probs=57.4
Q ss_pred cCHHHHHHHHHHHHHhcCCcccccCC---CCCCCchHHHHHhh--cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHH
Q 014490 338 NNKNLHEHFQKVAADMLGVQNIKENR---PLMGTEDFSFFAEA--IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPY 412 (423)
Q Consensus 338 ~d~~~~~~l~~~~~~~~g~~~~~~~~---~~~g~tD~~~~~~~--ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~ 412 (423)
.++.+...+++++++. |.+...... ..+|++|++.+... +|++-+|++... .|++.|-++..|+..
T Consensus 368 ~~~~~~~~~~~ia~~~-~Ip~Q~~~~gr~d~~gGstig~i~a~~Gi~tvdiGiP~l~--------MHS~~E~~~~~D~~~ 438 (450)
T 2glf_A 368 AHAEFVARVRKVLNEQ-GVIWQVATLGKVDQGGGGTIAKFFAERGSDVIDMGPALLG--------MHSPFEISSKADLFE 438 (450)
T ss_dssp CCHHHHHHHHHHHHHT-TCCEEECCSSSTTSCCCCCTHHHHHTTTSCEEEEECEEBS--------TTSSSEEEEHHHHHH
T ss_pred CCHHHHHHHHHHHHHc-CCCEEEEEeccCCCCCCCcHHHHHhCCCCcEEEechhhcc--------cchHHHHhhHHHHHH
Confidence 4678889999999988 886533212 14455555554433 999888887654 899999999999999
Q ss_pred HHHHHHHHHh
Q 014490 413 GAALHASLAT 422 (423)
Q Consensus 413 ~~~~~~~~i~ 422 (423)
++++|..|+.
T Consensus 439 ~~~l~~af~~ 448 (450)
T 2glf_A 439 TYVAYRSLME 448 (450)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999875
No 62
>2hc9_A Leucine aminopeptidase 1; carbonate, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics; 1.85A {Caenorhabditis elegans} PDB: 2hb6_A
Probab=91.43 E-value=3.1 Score=40.80 Aligned_cols=113 Identities=13% Similarity=-0.036 Sum_probs=71.5
Q ss_pred HHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEec-------ccCce--------------EEEEECCC-CCcE
Q 014490 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP-------VAVTG--------------VVGYIGTG-QPPF 107 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~-------~~~~n--------------via~~~~~-~~~~ 107 (423)
.+-+.+.|+|+.-|.---.....+++..+.+++.|++++.. .+.+. +.-++.+. ..++
T Consensus 167 a~~~~~aR~L~n~P~n~~tP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~~~~~~~~ 246 (491)
T 2hc9_A 167 SESVRETARLIDTPANILTTDALVDEAVKVGNATGSKITVIRGEELLKAGFGGIYHVGKAGPTPPAFVVLSHEVPGSTEH 246 (491)
T ss_dssp HHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHTTCEEEEEETHHHHHHTCHHHHHHHTTSSSCCEEEEEEECCTTCSCE
T ss_pred HHHHHHHHHHhcCCchhCCHHHHHHHHHHHHhhcCcEEEEEeHHHHHhCCCCcEEEecccCCCCCEEEEEEeCCCCCCCc
Confidence 56778999999988865566888999999999999988761 11111 22222221 1244
Q ss_pred EEEEEecccccCcCCCCCcccC----CC-CCcccc-CCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 014490 108 VALRADMDALAMEESVEWEHKS----KV-PGKMHA-CGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (423)
Q Consensus 108 ill~~H~Dtvp~~~~~~w~~~~----~~-~g~~~g-rG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE 174 (423)
|+|.|- +.+|++ .+ .+.|.+ +..++|.|+.+++++++.+.+ ++.+|..++...|=
T Consensus 247 i~LVGK----------GiTFDsGG~slKp~~~M~~Mk~DM~GAAaVlg~~~a~a~l~--l~vnv~~~l~~~EN 307 (491)
T 2hc9_A 247 IALVGK----------GVVYDTGGLQIKTKTGMPNMKRDMGGAAGMLEAYSALVKHG--FSQTLHACLCIVEN 307 (491)
T ss_dssp EEEEEE----------EEEEECCTTSCCCTTTSTTGGGGGHHHHHHHHHHHHHHTTT--CCSEEEEEEEEEEE
T ss_pred EEEEcC----------ceEecCCCccCCCCcChhhccccccHHHHHHHHHHHHHHcC--CCceEEEEEEeeec
Confidence 444433 222331 11 122322 112599999999999998765 78899988887775
No 63
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7}
Probab=90.29 E-value=0.37 Score=48.22 Aligned_cols=77 Identities=10% Similarity=-0.095 Sum_probs=57.4
Q ss_pred cCHHHHHHHHHHHHHhc-----CCcccccC---CCCCCCchHHHHH-hh-cCeEEEEeccCCCCCCCCCCCCCCCccCCC
Q 014490 338 NNKNLHEHFQKVAADML-----GVQNIKEN---RPLMGTEDFSFFA-EA-IPGYFYYLGMNDETKGKFETGHSPYFRVNE 407 (423)
Q Consensus 338 ~d~~~~~~l~~~~~~~~-----g~~~~~~~---~~~~g~tD~~~~~-~~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~ 407 (423)
.++.+...+++++++.. |.+..... ...+|+|++.... +. +|++.++++... .|++.|-++.
T Consensus 472 tn~~~~~~l~~iA~~~~~~~~~gIP~Q~~v~rnD~~gGgTig~i~~s~~GIpTvdIGiP~ry--------MHS~~E~~~~ 543 (571)
T 4eme_A 472 TSPLHASLIKRTFELYYNKYKQQIKYQNFMVKNDTPCGSTVGSMVAANLSMPGIDIGIPQLA--------MHSIREIAAV 543 (571)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCSSSCCCCCSHHHHHHHHTCCEEEEECEEES--------TTSSSEEEEH
T ss_pred cCHHHHHHHHHHHHhcccccCCCCCEEEEEEcCCCCCcchHHHHHHhCCCCcEEEechhhhc--------cchHHHHhhH
Confidence 46788888988888762 44332111 1246788877665 33 999988888655 8999999999
Q ss_pred CchHHHHHHHHHHHh
Q 014490 408 DALPYGAALHASLAT 422 (423)
Q Consensus 408 ~~l~~~~~~~~~~i~ 422 (423)
.|+..+++++..|+.
T Consensus 544 ~Dv~~~vkLl~aFl~ 558 (571)
T 4eme_A 544 HDVFFLIKGVFAFYT 558 (571)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998874
No 64
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=89.55 E-value=0.15 Score=50.29 Aligned_cols=76 Identities=9% Similarity=0.006 Sum_probs=58.2
Q ss_pred cCHHHHHHHHHHHHHhcCCcccccC----CCCCCCchHHHHHhh-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHH
Q 014490 338 NNKNLHEHFQKVAADMLGVQNIKEN----RPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPY 412 (423)
Q Consensus 338 ~d~~~~~~l~~~~~~~~g~~~~~~~----~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~ 412 (423)
.|..+...+++++++. |.+..... ...+|+|.+..+.+. +|++-+|++... .|++.|.++.+++..
T Consensus 380 ~~~~~~~~l~~ia~~~-~Ip~Q~~~~gr~d~~~GgTig~~~a~~Gi~tvdiGiP~l~--------MHS~~E~~~~~Di~~ 450 (461)
T 2glj_A 380 ANPEYIAELRRILSKE-SVNWQTAELGKVDQGGGGTIAYILAEYGMQVIDCGVALLN--------MHAPWEISSKADIYE 450 (461)
T ss_dssp CCHHHHHHHHHHHHHT-CCCEEECCSSSSSSSCCCCTHHHHHTTTCBCCBBCCEEES--------TTSSSEEEEHHHHHH
T ss_pred CCHHHHHHHHHHHHHc-CCCeEEEeeeccCCCCcccHHHHHhCCCCCEEEEchhhcc--------cchHHHHhhHHHHHH
Confidence 4788899999999998 87653311 113477766666655 898877777543 899999999999999
Q ss_pred HHHHHHHHHh
Q 014490 413 GAALHASLAT 422 (423)
Q Consensus 413 ~~~~~~~~i~ 422 (423)
.++++..++.
T Consensus 451 ~~~l~~af~~ 460 (461)
T 2glj_A 451 TKNGYSAFLN 460 (461)
T ss_dssp HHHHHHTTSC
T ss_pred HHHHHHHHHh
Confidence 9999998764
No 65
>3h8g_F Cytosol aminopeptidase; hydrolase, manganese, metal-binding, proteas; HET: BES; 1.50A {Pseudomonas putida} PDB: 3h8e_A 3h8f_A*
Probab=87.86 E-value=4.9 Score=39.52 Aligned_cols=115 Identities=9% Similarity=-0.020 Sum_probs=73.2
Q ss_pred hHHHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhC-CCCeEec-------cc-------------Cce-EEEEECC-C-
Q 014490 48 IFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQM-GIPYKFP-------VA-------------VTG-VVGYIGT-G- 103 (423)
Q Consensus 48 ~~~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~-g~~~~~~-------~~-------------~~n-via~~~~-~- 103 (423)
.+.+-+.+.|+|++-|.---.....+++..+.++.+ |++++.. .+ .|- +.-++.+ +
T Consensus 178 ~~a~~~~~aRdL~n~P~n~~~P~~~a~~a~~l~~~~~g~~v~v~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~ 257 (497)
T 3h8g_F 178 AIATGMAFTRDLGNLPPNLCHPSFLAEQAKELGKAHKALKVEVLDEKKIKDLGMGAFYAVGQGSDQPPRLIVLNYQGGKK 257 (497)
T ss_dssp HHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHCTTEEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEECSCT
T ss_pred HHHHHHHHHHHhhcCCccccCHHHHHHHHHHHHhhcCCceEEEEeHHHHHhCCCCcEEEEccCCCCCCEEEEEEECCCCC
Confidence 346678899999999986666688899999999998 9988761 11 111 2222322 1
Q ss_pred CCcEEEEEEecccccCcCCCCCcccC----CC-CCcccc-CCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 014490 104 QPPFVALRADMDALAMEESVEWEHKS----KV-PGKMHA-CGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (423)
Q Consensus 104 ~~~~ill~~H~Dtvp~~~~~~w~~~~----~~-~g~~~g-rG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE 174 (423)
..++|.|.|- +.+|++ .+ .+-|.+ +...+|.|+.+++++++.+.+ ++.+|..++...|=
T Consensus 258 ~~~~i~LVGK----------GiTFDsGG~slKp~~~M~~Mk~DM~GAAaV~g~~~a~a~l~--l~vnv~~~i~~~EN 322 (497)
T 3h8g_F 258 ADKPFVLVGK----------GITFDTGGISLKPGAGMDEMKYDMCGAASVFGTLRAVLELQ--LPVNLVCLLACAEN 322 (497)
T ss_dssp TSCCEEEEEE----------EEEEECCTTSCCCSTTGGGGGGTTHHHHHHHHHHHHHHHHT--CSSEEEEEEEEEEE
T ss_pred CCCcEEEEcC----------ceEeccCCccCCCccchhhccccchHHHHHHHHHHHHHHcC--CCeEEEEEEEeecc
Confidence 1244555443 222331 11 111221 112599999999999998875 77899988887775
No 66
>1gyt_A Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli} SCOP: c.56.5.3 c.50.1.1
Probab=87.43 E-value=5.4 Score=39.40 Aligned_cols=115 Identities=10% Similarity=0.016 Sum_probs=72.7
Q ss_pred hHHHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCC--CCeEec-------cc-------------Cce-EEEEECC-C
Q 014490 48 IFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMG--IPYKFP-------VA-------------VTG-VVGYIGT-G 103 (423)
Q Consensus 48 ~~~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g--~~~~~~-------~~-------------~~n-via~~~~-~ 103 (423)
...+-+.+.|+|++-|.---.....+++..+.++++| ++++.- .+ .|- ++-++.+ +
T Consensus 179 ~~a~~~~laRdL~n~P~N~~tP~~lA~~a~~la~~~g~~~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~Y~g~~ 258 (503)
T 1gyt_A 179 AIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNA 258 (503)
T ss_dssp HHHHHHHHHHHHHHSCTTTCSHHHHHHHHHHHHHHTTTTEEEEEECHHHHHHTTCHHHHHHHHTSSSCCEEEEEEEECCC
T ss_pred HHHHHHHHHHHHhcCChhhcCHHHHHHHHHHHHHhcCCceEEEEEcHHHHHHCCCCceeeecccCCCCCeEEEEEECCCC
Confidence 3466788999999999865566788999999999999 887661 11 111 2222321 1
Q ss_pred --CCcEEEEEEecccccCcCCCCCcccC----CC-CCcccc-CCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 014490 104 --QPPFVALRADMDALAMEESVEWEHKS----KV-PGKMHA-CGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (423)
Q Consensus 104 --~~~~ill~~H~Dtvp~~~~~~w~~~~----~~-~g~~~g-rG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE 174 (423)
..++|.|.|- +.+|++ .+ .+-|.. +...+|.|+.+++++++.+.+ ++.+|..+....|=
T Consensus 259 ~~~~~~i~LVGK----------GITFDsGGislKp~~~M~~MK~DM~GAAaVlg~~~aia~l~--l~vnV~~~i~~~EN 325 (503)
T 1gyt_A 259 SEDARPIVLVGK----------GLTFDSGGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQ--LPINVIGVLAGCEN 325 (503)
T ss_dssp CTTCCCEEEEEE----------EEEEECCTTSCCCSTTGGGGGGGGHHHHHHHHHHHHHHHHT--CSSEEEEEEEEEEE
T ss_pred CCCCCcEEEEcC----------ceEecCCCccccCCcChhhcccccchHHHHHHHHHHHHHcC--CCeeEEEEEEeecc
Confidence 1244555443 223431 11 112221 112499999999999998865 77899988887775
No 67
>3jru_B Probable cytosol aminopeptidase; bacterial blight, XOO0834, PEPA, xanthomonas oryzae PV. ORYZ KACC10331, hydrolase, manganese; 2.60A {Xanthomonas oryzae PV}
Probab=87.31 E-value=5.6 Score=38.99 Aligned_cols=115 Identities=12% Similarity=0.005 Sum_probs=72.3
Q ss_pred hHHHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhC-CCCeEec-------cc-------------Cce-EEEEECC-CC
Q 014490 48 IFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQM-GIPYKFP-------VA-------------VTG-VVGYIGT-GQ 104 (423)
Q Consensus 48 ~~~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~-g~~~~~~-------~~-------------~~n-via~~~~-~~ 104 (423)
...+-+.+.|+|++-|.---.....+++..+.+++. |++++.. .+ .|- +.-++.+ +.
T Consensus 174 ~~a~~~~~aRdL~n~P~n~~~P~~~a~~a~~~~~~~~g~~v~v~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~ 253 (490)
T 3jru_B 174 ATAEGVEFARELGNLPPNYCTPAYLADTAAAFAGKFPGAEAEILDEAQMEALGMGSLLSVARGSANRPRLIVLKWNGGGD 253 (490)
T ss_dssp HHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHTTSTTEEEEEECHHHHHHTTCHHHHHHHHTCSSCCEEEEEEEETTTT
T ss_pred HHHHHHHHHHHhhcCCccccCHHHHHHHHHHHHhhcCCCeEEEEcHHHHHhCCCCcEEEEccCCCCCCEEEEEEEcCCCC
Confidence 346678899999999986666688899999998887 8888661 11 111 2222221 12
Q ss_pred CcEEEEEEecccccCcCCCCCcccC----CC-CCcccc-CCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 014490 105 PPFVALRADMDALAMEESVEWEHKS----KV-PGKMHA-CGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (423)
Q Consensus 105 ~~~ill~~H~Dtvp~~~~~~w~~~~----~~-~g~~~g-rG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE 174 (423)
.++|.|.|- +.+|++ .+ .+-|.+ +...+|.|+.+++++++.+.+ ++.+|..++...|=
T Consensus 254 ~~~i~LVGK----------GiTFDsGG~slKp~~~M~~Mk~DM~GAAaV~g~~~a~a~l~--l~vnv~~~i~~~EN 317 (490)
T 3jru_B 254 ARPYVLVGK----------GITFDTGGVNLKTQGGIEEMKYDMCGGATVIGTFVATVKAE--LPINLVVVVPAVEN 317 (490)
T ss_dssp SCCEEEEEC----------EEEEECCTTSCCCSSCGGGGGGGGHHHHHHHHHHHHHHHTT--CSSEEEEEEEEEEE
T ss_pred CCcEEEEcC----------eeEecCCCccCCCcccHhhCcccchHHHHHHHHHHHHHHcC--CCcEEEEEEEeecc
Confidence 244554442 222331 11 111221 112599999999999999875 77889888887765
No 68
>1lam_A Leucine aminopeptidase; exopeptidase, metallopeptidase, hydrolase (A aminoacylpeptide); 1.60A {Bos taurus} SCOP: c.56.5.3 c.50.1.1 PDB: 1lan_A 1lcp_A* 1lap_A 1bpn_A 1bpm_A 1bll_E* 2j9a_A* 2ewb_A*
Probab=87.12 E-value=4.8 Score=39.51 Aligned_cols=121 Identities=13% Similarity=0.080 Sum_probs=71.3
Q ss_pred HHHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCC--CCeEec-------ccCceEEEEECCC-CCcEEEEEEeccccc
Q 014490 49 FYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMG--IPYKFP-------VAVTGVVGYIGTG-QPPFVALRADMDALA 118 (423)
Q Consensus 49 ~~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g--~~~~~~-------~~~~nvia~~~~~-~~~~ill~~H~Dtvp 118 (423)
..+-+.+.|+|++-|.---.....+++..+.+++.| ++++.. .+.+.+++.=+++ ..|.++...+. |
T Consensus 160 ~a~~~~laRdLvn~P~N~~tP~~lA~~a~~l~~~~g~~~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~y~---g 236 (484)
T 1lam_A 160 FASGQNLARRLMETPANEMTPTKFAEIVEENLKSASIKTDVFIRPKSWIEEQEMGSFLSVAKGSEEPPVFLEIHYK---G 236 (484)
T ss_dssp HHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHHCSSEEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEE---C
T ss_pred HHHHHHHHHHhhCCChhhcCHHHHHHHHHHHHHHcCCceEEEEEeHHHHHHCCCCceeeeccCCCCCCeEEEEEEC---C
Confidence 366778999999999866666888999999999999 887651 1111222221121 12333322111 1
Q ss_pred Cc-CC--------CCCcccC----CC-CCcccc-CCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 014490 119 ME-ES--------VEWEHKS----KV-PGKMHA-CGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (423)
Q Consensus 119 ~~-~~--------~~w~~~~----~~-~g~~~g-rG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE 174 (423)
.+ +. .+.+|++ .+ .+-|.+ +...+|.|+.+++++++.+.+ ++.+|..++...|=
T Consensus 237 ~~~~~~~~i~LVGKGITFDsGG~slKp~~~M~~MK~DMgGAAaVlg~~~aia~l~--l~vnv~~~i~~~EN 305 (484)
T 1lam_A 237 SPNASEPPLVFVGKGITFDSGGISIKAAANMDLMRADMGGAATICSAIVSAAKLD--LPINIVGLAPLCEN 305 (484)
T ss_dssp SSSTTSCCEEEEECEEEEECCTTSCCCSTTGGGGGGTTHHHHHHHHHHHHHHHTT--CSSEEEEEEEEEEE
T ss_pred CCCCCCCcEEEEecceEEcCCCcCCcCccchhhhhccchHHHHHHHHHHHHHHcC--CCeeEEEEEEeecc
Confidence 11 00 1223431 11 112211 112499999999999999875 77899888887775
No 69
>3pei_A Cytosol aminopeptidase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich; HET: MSE; 2.70A {Francisella tularensis subsp}
Probab=85.94 E-value=5 Score=39.32 Aligned_cols=115 Identities=12% Similarity=0.032 Sum_probs=70.9
Q ss_pred hHHHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhC-CCCeEec-------cc-------------Cce-EEEEECC-C-
Q 014490 48 IFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQM-GIPYKFP-------VA-------------VTG-VVGYIGT-G- 103 (423)
Q Consensus 48 ~~~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~-g~~~~~~-------~~-------------~~n-via~~~~-~- 103 (423)
.+.+-+.+.|+|++-|.---.....+++..+.++.. |++++.- .+ .|- +.-++.+ +
T Consensus 162 ~~a~~~~~aRdL~n~P~n~~~P~~~a~~a~~l~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~ 241 (486)
T 3pei_A 162 AIACGQNYAKDLQNLPANICTTDYMLNEARELTSKYATFSLDYLDQDAMAELGMGCALAVGRGSYMSNYTVCMEYKGGNE 241 (486)
T ss_dssp HHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHTCTTEEEEEECHHHHHHTTCHHHHHHHTTCSSCCEEEEEEEECSCT
T ss_pred HHHHHHHHHHHHhcCChhhcCHHHHHHHHHHHHhhcCCceEEEEeHHHHHhCCCCcEEEeccCCCCCCEEEEEEECCCCC
Confidence 335678899999999986666688899999999998 8888661 11 111 2222222 1
Q ss_pred CCcEEEEEEecccccCcCCCCCcccC----CCC-Ccccc-CCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 014490 104 QPPFVALRADMDALAMEESVEWEHKS----KVP-GKMHA-CGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (423)
Q Consensus 104 ~~~~ill~~H~Dtvp~~~~~~w~~~~----~~~-g~~~g-rG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE 174 (423)
..++|.|.|- +.+|++ .+. +-|.+ +...+|.|+.+++++++.+.+ ++.+|..+....|=
T Consensus 242 ~~~~i~LVGK----------GiTFDsGG~slKp~~~M~~Mk~DM~GAAaVlg~~~a~a~l~--l~vnv~~~i~~~EN 306 (486)
T 3pei_A 242 GDAPIVLVGK----------GLVFDNGGICIKQAAGMDSMKMDMGGVAAVMGTMKAIAMLN--LPVNVVGVMGLAEN 306 (486)
T ss_dssp TSCCEEEEEE----------EEETEECC------------EECSHHHHHHHHHHHHHHHHT--CSSEEEEEEEEEEC
T ss_pred CCCcEEEEcc----------ceEEecCCcccCCccchhhhhccchHHHHHHHHHHHHHHcC--CCcEEEEEEEeecc
Confidence 1244555443 222331 111 11211 111499999999999998875 77899888887775
No 70
>4efd_A Aminopeptidase; structural genomics, structural genomics consortium, SGC, hydrolase; 2.45A {Trypanosoma brucei brucei}
Probab=84.65 E-value=11 Score=37.05 Aligned_cols=113 Identities=9% Similarity=-0.021 Sum_probs=71.1
Q ss_pred HHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEec-------cc-------------Cce-EEEEECCC--CCc
Q 014490 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP-------VA-------------VTG-VVGYIGTG--QPP 106 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~-------~~-------------~~n-via~~~~~--~~~ 106 (423)
.+-+.+.|+|++-|.---.....+++..+.++++|++++.. .+ .|- +.-++.+. ..+
T Consensus 204 a~~~~laRdLvn~P~N~~tP~~lA~~a~~l~~~~gv~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~L~Y~g~~~~~~ 283 (522)
T 4efd_A 204 ATSTQLCQRLVDAPPNLLTTATFTEIAQGYAKALGFDVDVICGDDLCERGYGGIYSVGKAAFEAPRLVTLLYTPKGTPVK 283 (522)
T ss_dssp HHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHHTCEEEEEETHHHHHHTCHHHHHHHTTSSSCCEEEEEEECCSSCCSE
T ss_pred HHHHHHHHHHhcCCchhCCHHHHHHHHHHHHHHcCCEEEEEeHHHHHHcCCCcEEeeccCCCCCCEEEEEEECCCCCCCC
Confidence 56788999999999866666888999999999999988761 11 111 22223222 124
Q ss_pred EEEEEEecccccCcCCCCCcccC----CCC-Ccccc-CCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 014490 107 FVALRADMDALAMEESVEWEHKS----KVP-GKMHA-CGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (423)
Q Consensus 107 ~ill~~H~Dtvp~~~~~~w~~~~----~~~-g~~~g-rG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE 174 (423)
+|.|.|- +.+|++ .+. +-|.+ +...+|.|+.+++++++.+.+ ++.+|..++...|=
T Consensus 284 ~iaLVGK----------GITFDSGGlsLKp~~~M~~MK~DMgGAAaVlga~~a~a~l~--lpvnV~~vl~~~EN 345 (522)
T 4efd_A 284 KVSLVGK----------GIVYDCGGLALKPADYMKLMKHDMGGAAAVFCGFLTAVRLQ--QPVQLSCTLCLAEN 345 (522)
T ss_dssp EEEEEEE----------EEETCCCCSSSCHHHHHHHGGGTTHHHHHHHHHHHHHHHHT--CSEEEEEEEEEEEC
T ss_pred cEEEecC----------ceEeecCCccCCCccchhhcccccchHHHHHHHHHHHHHcC--CCceEEEEEEEecc
Confidence 5555443 122321 110 01111 111489999999999998765 77889888887775
No 71
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=84.00 E-value=0.21 Score=48.65 Aligned_cols=61 Identities=11% Similarity=0.129 Sum_probs=42.2
Q ss_pred HHhHhCCCCCCCcHHHHHHHHHHHHhCCC---------------CeEecccCceEEEEECCCC----CcEEEEEEecccc
Q 014490 57 RKIHENPELGFQEFETSKLIRAELDQMGI---------------PYKFPVAVTGVVGYIGTGQ----PPFVALRADMDAL 117 (423)
Q Consensus 57 ~~l~~ips~s~~E~~~~~~l~~~l~~~g~---------------~~~~~~~~~nvia~~~~~~----~~~ill~~H~Dtv 117 (423)
++++.+=+-|..+..+.+++.++|++.|| ++..+....|++|...++. .+.+++.||+|..
T Consensus 6 ~~~~~fl~~~~t~~h~v~~~~~~l~~~Gf~~l~e~~~w~l~~g~k~~~~~~~g~lia~~~G~~~~~~~~~~ii~AH~Dsp 85 (428)
T 2ijz_A 6 QGLIDFLKASPTPFHATASLARRLEAAGYRRLDERDAWHTETGGRYYVTRNDSSLIAIRLGRRSPLESGFRLVGAHTDSP 85 (428)
T ss_dssp --CCCSSTTTHHHHHHHCCSHHHHHHHHHHHSCC--------CCCCEECTTTTCCEEEECC--CCSTTCCEEEECBCCCS
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHcCCeEcccccccccCCCCEEEEECCCCEEEEEEECCcCCCCCCcEEEEEcCCcC
Confidence 34555666666778888888888888888 2222333378999874432 4789999999998
No 72
>3kzw_A Cytosol aminopeptidase; hydrolase, manganese binding, protease, structural genomics; 2.70A {Staphylococcus aureus subsp}
Probab=83.75 E-value=9.3 Score=37.56 Aligned_cols=114 Identities=14% Similarity=0.042 Sum_probs=71.8
Q ss_pred HHHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEec-------ccC-------------ce-EEEEECC-C-CC
Q 014490 49 FYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP-------VAV-------------TG-VVGYIGT-G-QP 105 (423)
Q Consensus 49 ~~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~-------~~~-------------~n-via~~~~-~-~~ 105 (423)
+.+-+.+.|+|++-|.---.....++++.+.+++.|++++.. .+. |- +.-++.+ + ..
T Consensus 196 ~a~~~~~aRdL~n~P~n~ltP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~~~ 275 (515)
T 3kzw_A 196 IGQSINLARDFSNMPPNVLTPQTFAEDIVNHFKNTKVKVDVKDYDTLVSEGFGLLQAVGKGSKHKPRLVTITYNGKDKDE 275 (515)
T ss_dssp HHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHSTTSSCEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEESSCSSC
T ss_pred HHHHHHHHHHHhcCCccccCHHHHHHHHHHHHHhcCcEEEEEcHHHHHHcCCCcEEEEccCCCCCCEEEEEEECCCCCCC
Confidence 366778999999999866666888999999999999988761 111 11 2222221 1 12
Q ss_pred cEEEEEEecccccCcCCCCCcccC----CCC-Ccccc-CCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 014490 106 PFVALRADMDALAMEESVEWEHKS----KVP-GKMHA-CGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (423)
Q Consensus 106 ~~ill~~H~Dtvp~~~~~~w~~~~----~~~-g~~~g-rG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE 174 (423)
++|.|.|- +.+|++ .+. +-|.+ +...+|.|+.+++++++.+.+ ++.+|..++...|=
T Consensus 276 ~~i~LVGK----------GiTFDsGG~slKp~~~M~~MK~DM~GAAaVlg~~~a~a~l~--lpvnv~~~i~~~EN 338 (515)
T 3kzw_A 276 APIALVGK----------GITYDSGGYSIKTKNGMATMKFDMCGAANVVGIIEAASRLQ--LPVNIVGVLACAEN 338 (515)
T ss_dssp CCEEEEEE----------EEEEECCTTSCCCHHHHTTGGGGGHHHHHHHHHHHHHHHTT--CSCEEEEEEEEEEE
T ss_pred CcEEEecC----------ceEEecCCcCCCCccChhhchhchHHHHHHHHHHHHHHHcC--CCceEEEEEEeecc
Confidence 44554443 222331 111 11211 111489999999999999875 77889888887764
No 73
>3ij3_A Cytosol aminopeptidase; PEPB, peptidase M17 family, IDP01962 aminopeptidase, hydrolase, manganese, metal-binding, protea structural genomics; HET: PGE PG4; 1.80A {Coxiella burnetii}
Probab=83.67 E-value=9.9 Score=37.02 Aligned_cols=120 Identities=13% Similarity=0.123 Sum_probs=69.8
Q ss_pred HHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEecc------cCceEEEEECCC-CCcEEEEEEecccccCcCC
Q 014490 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPV------AVTGVVGYIGTG-QPPFVALRADMDALAMEES 122 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~~------~~~nvia~~~~~-~~~~ill~~H~Dtvp~~~~ 122 (423)
.+-+.+.|+|++.|.---.....+++..+.+++.|++++..+ +.+.+++.=+++ ..|.++...+ . |.++.
T Consensus 167 a~~~~laRdLvn~P~N~~tP~~~A~~a~~la~~~g~~v~V~~~~~~~~gmg~~laVg~GS~~pPrli~l~y--~-~~~~~ 243 (482)
T 3ij3_A 167 LTTIYLIRDLINTPAEDMGPSELAQAVKHVAKEFEAKVKIIESKDLETEFPAIYAVGRAGSRPPLLIDLKW--G-DIKAP 243 (482)
T ss_dssp HHHHHHHHHHHHSCGGGSSHHHHHHHHHHHHHHHTCEEEEEEHHHHHHHCHHHHHHHTTSSSCCEEEEEEE--S-CTTSC
T ss_pred HHHHHHHHHHhcCCccccCHHHHHHHHHHHHHHcCCeEEEEchHHHHcCCCcEEEEccCCCCCCEEEEEEe--C-CCCCC
Confidence 567889999999998655567889999999999999886511 111122211222 1233333222 1 11100
Q ss_pred ------CCCcccC----CCCC-cccc-CCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 014490 123 ------VEWEHKS----KVPG-KMHA-CGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (423)
Q Consensus 123 ------~~w~~~~----~~~g-~~~g-rG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE 174 (423)
.+.+|++ .+.+ .|.. +...+|.|+.+++++++.+.+ ++.+|..++...|=
T Consensus 244 ~i~LVGKGITFDsGGlslKp~~~M~~MK~DMgGAAaVlg~~~aia~l~--lpvnv~~ii~~~EN 305 (482)
T 3ij3_A 244 KVTLVGKGVCFDSGGLDIKTPGGMLLMKKDMGGAAHALGLARMIMLQQ--LPVRLRLLIPAVEN 305 (482)
T ss_dssp EEEEEECEEEEECCTTSCCCHHHHTTGGGGGHHHHHHHHHHHHHHHTT--CSSEEEEEEEEEEE
T ss_pred eEEEEccceEeecCCccCcCccchhhccccchHHHHHHHHHHHHHHcC--CCceEEEEEEeecc
Confidence 0122331 1111 1111 111489999999999999875 78899988877765
No 74
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=83.46 E-value=2 Score=42.04 Aligned_cols=68 Identities=15% Similarity=0.004 Sum_probs=47.0
Q ss_pred HHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEe-------------cccCceEEEEECCCC--CcEEEEEEec
Q 014490 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKF-------------PVAVTGVVGYIGTGQ--PPFVALRADM 114 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~-------------~~~~~nvia~~~~~~--~~~ill~~H~ 114 (423)
+++.++.++++.+=+-|..+..+.+++.+.|++.||.--. +....|++|...+++ .+.+++.||+
T Consensus 14 ~~~~~~~~~~~~Fl~~s~t~~h~v~~~~~~l~~~Gf~~l~e~~~l~~g~k~~~~r~~~~lia~~~g~~~~~g~~ii~AH~ 93 (450)
T 2glf_A 14 EEIEAFSKEYMEFMSKAKTERMTVKEIKRILDESGFVPLEDFAGDPMNMTVYAVNRGKAIAAFRVVDDLKRGLNLVVAHI 93 (450)
T ss_dssp HHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHTTTCEETTSCCSCTTSBCEEEESSSSCEEEEEBCSCGGGCCEEEEEEC
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCcCEEcccccCCCCCCEEEEEcCCCEEEEEEeCCCCCCCeEEEEEec
Confidence 3344445555555555666799999999999999995311 112368999875432 3789999999
Q ss_pred ccc
Q 014490 115 DAL 117 (423)
Q Consensus 115 Dtv 117 (423)
|-+
T Consensus 94 Dsp 96 (450)
T 2glf_A 94 DSP 96 (450)
T ss_dssp CCC
T ss_pred ccC
Confidence 987
No 75
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=82.53 E-value=0.75 Score=45.19 Aligned_cols=65 Identities=11% Similarity=0.065 Sum_probs=42.5
Q ss_pred HHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCC-------------eEecccCceEEEEE--CCC---CCcEEEEEE
Q 014490 51 WMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIP-------------YKFPVAVTGVVGYI--GTG---QPPFVALRA 112 (423)
Q Consensus 51 ~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~-------------~~~~~~~~nvia~~--~~~---~~~~ill~~ 112 (423)
++.++.++++.+-+-|..+..+.+++.++|++.||. +..+. ..|+++.+ +.. .++. ++.|
T Consensus 17 ~~~~~~~~~~~fl~~spT~~hav~~~~~~l~~~Gf~~l~e~~~l~~g~~~~~~r-~g~~i~a~~~G~~~~~~g~~-ii~A 94 (458)
T 1y7e_A 17 QILNFSESYKKFISKFKTEREVTAYALDKAKKLGFINAEEKKNLMPGDKIFYTC-REKSVAFAIIGKNPIEDGMN-FIVS 94 (458)
T ss_dssp HHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHTTTCEESTTCCCCCTTCEEECBC-SSSCBCCEECCSSCGGGCCE-ECCC
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCeEEEEC-CCCEEEEEEeCCCCCCCCcE-EEEE
Confidence 344445555555555666789999999999999986 22222 24544443 332 2455 9999
Q ss_pred ecccc
Q 014490 113 DMDAL 117 (423)
Q Consensus 113 H~Dtv 117 (423)
|+|..
T Consensus 95 H~Dsp 99 (458)
T 1y7e_A 95 HTDSP 99 (458)
T ss_dssp BCCCC
T ss_pred ccCcC
Confidence 99998
No 76
>3kr4_A M17 leucyl aminopeptidase; protease, hydrolase; HET: BES 1PE; 2.00A {Plasmodium falciparum} PDB: 3kqz_A* 3kqx_A* 3kr5_A* 3t8w_A*
Probab=77.58 E-value=36 Score=33.54 Aligned_cols=115 Identities=13% Similarity=0.097 Sum_probs=71.5
Q ss_pred hHHHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEec-------c-------------cCce-EEEEECCC--C
Q 014490 48 IFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP-------V-------------AVTG-VVGYIGTG--Q 104 (423)
Q Consensus 48 ~~~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~-------~-------------~~~n-via~~~~~--~ 104 (423)
.+.+-+.+.|+|++.|.---.....++...+.++++|++++.- . ..|- +.-++.+. .
T Consensus 203 ~~a~~v~laRdLvn~P~N~ltP~~lA~~a~~la~~~g~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~y~g~~~~ 282 (528)
T 3kr4_A 203 VYYFGTYYASQLIAAPSNYCNPVSLSNAAVELAQKLNLEYKILGVKELEELKMGAYLSVGKGSMYPNKFIHLTYKSKGDV 282 (528)
T ss_dssp HHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHHTCEEEEECHHHHHHTTCHHHHHHGGGCSSCCEEEEEEEECSSCC
T ss_pred HHHHHHHHHHHHhhCCccccCHHHHHHHHHHHHHHcCCeEEEeeHHHHHhcCCCeEEeeccCCCCCCEEEEEEEcCCCCC
Confidence 4466788999999999866666788888888888899988761 0 1111 22233222 1
Q ss_pred CcEEEEEEecccccCcCCCCCcccC----CCC--C-cccc-CCchHHHHHHHHHHHHHHhccccC-CceEEEEEecCCC
Q 014490 105 PPFVALRADMDALAMEESVEWEHKS----KVP--G-KMHA-CGHDAHVAMLLGAAKMLQVFRHEI-KGTIVLVFQPAEE 174 (423)
Q Consensus 105 ~~~ill~~H~Dtvp~~~~~~w~~~~----~~~--g-~~~g-rG~k~~~a~~l~a~~~l~~~~~~~-~~~i~~~~~~~EE 174 (423)
.++|.|.|- +.+|++ .+. | .|.. +...+|.|+.+++++++.+.+ + +.+|..++...|=
T Consensus 283 ~~~iaLVGK----------GITFDsGG~slKp~~g~~M~~MK~DM~GAAaVlg~~~aia~l~--~~~vnv~~vi~~~EN 349 (528)
T 3kr4_A 283 KKKIALVGK----------GITFDSGGYNLKAAPGSMIDLMKFDMSGCAAVLGCAYCVGTLK--PENVEIHFLSAVCEN 349 (528)
T ss_dssp CEEEEEEEE----------EEEEECCTTSCSCSTTCCGGGGGGGGHHHHHHHHHHHHHHHHC--CSSEEEEEEEEEEEE
T ss_pred CCcEEEecC----------ceEeecCCcccCCCCCcCHHHhhcCcchHHHHHHHHHHHHhcC--CCCceEEEEEEeecc
Confidence 355666554 222331 111 1 1221 112489999999999998765 4 5788888776664
No 77
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=75.36 E-value=9.1 Score=26.38 Aligned_cols=66 Identities=15% Similarity=0.268 Sum_probs=43.1
Q ss_pred CcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCccccCHHHHHHHHHHHHHhcCCcc
Q 014490 285 DSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQN 358 (423)
Q Consensus 285 ~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~g~~~ 358 (423)
|.-++++|+|...+...+...+.+++.+..... .++++++.. .. -....++..++.+..+++ |.+.
T Consensus 15 dgqeieidirvstgkeleralqelekalaraga-rnvqitisa--en----deqakelleliarllqkl-gykd 80 (96)
T 2jvf_A 15 DGQEIEIDIRVSTGKELERALQELEKALARAGA-RNVQITISA--EN----DEQAKELLELIARLLQKL-GYKD 80 (96)
T ss_dssp TTEEEEEEEECCSSSHHHHHHHHHHHHHHHHTC-SEEEEEEEC--SS----HHHHHHHHHHHHHHHHHH-TCSE
T ss_pred CCeEEEEEEEEcccHHHHHHHHHHHHHHHhccc-cceEEEEEe--cC----hHHHHHHHHHHHHHHHHh-CCCc
Confidence 457899999999999988888888888765432 244454433 10 011145677777777777 7655
No 78
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=73.81 E-value=10 Score=34.26 Aligned_cols=82 Identities=21% Similarity=0.167 Sum_probs=53.2
Q ss_pred CHHHHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhh-cCeEEEEeccCCC-----------CCC--CCCCCCCCCcc
Q 014490 339 NKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDE-----------TKG--KFETGHSPYFR 404 (423)
Q Consensus 339 d~~~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~-----------~pg--~~~~~H~~~E~ 404 (423)
++.+.+.+.+.+++. |...... ....+.+|...|.+. +|++.+..+.... ..+ .....|++...
T Consensus 175 ~~~l~~~~~~~~~~~-gi~~~~~-~~~~~~sD~~~f~~~Gip~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~yHt~~D~ 252 (284)
T 1tkj_A 175 DPVIEKTFKNYFAGL-NVPTEIE-TEGDGRSDHAPFKNVGVPVGGLFTGAGYTKSAAQAQKWGGTAGQAFDRCYHSSCDS 252 (284)
T ss_dssp SHHHHHHHHHHHHHH-TCCCEEC-CSSTTCSTHHHHHHTTCCEEEEECCCSSBCCHHHHHHHCSCTTSBSCTTTTSTTCS
T ss_pred CHHHHHHHHHHHHHc-CCCcccC-CCCCCCCchHHHHHCCCCEEEeecCcccccccchhhccccccccCCCCCCCCCcCC
Confidence 566777787777766 7654322 223456898888777 9988776552100 000 12357999876
Q ss_pred ---CCCCchHHHHHHHHHHHh
Q 014490 405 ---VNEDALPYGAALHASLAT 422 (423)
Q Consensus 405 ---i~~~~l~~~~~~~~~~i~ 422 (423)
++.+++.+.+++++.++.
T Consensus 253 ~~~id~~~l~~~~~~~~~~~~ 273 (284)
T 1tkj_A 253 LSNINDTALDRNSDAAAHAIW 273 (284)
T ss_dssp TTSCCHHHHHHHHHHHHHHHH
T ss_pred hhhCCHHHHHHHHHHHHHHHH
Confidence 888899999988887764
No 79
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=63.78 E-value=3.7 Score=40.27 Aligned_cols=36 Identities=22% Similarity=0.211 Sum_probs=26.8
Q ss_pred hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHH
Q 014490 141 DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAK 180 (423)
Q Consensus 141 k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~Ga~ 180 (423)
+.++.++|.|++.++ .++.+++++++..|| |+.|+.
T Consensus 263 r~~~~~~l~al~~~~----~~~~~~~~~~~d~EEVGs~ga~ 299 (461)
T 2glj_A 263 RICAYTSFEAMLEMK----NAKKTCITILVDKEEVGSIGAT 299 (461)
T ss_dssp HHHHHHHHHHHHTCC----SCSSCEEEEEECCGGGTCCTTT
T ss_pred HHHHHHHHHHHHhhc----cCCCeEEEEEEccCCCCCcccc
Confidence 367777777766543 467899999999999 776654
No 80
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=58.51 E-value=6.7 Score=38.20 Aligned_cols=74 Identities=27% Similarity=0.295 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHhcCCcccccCCCCCCCchHHHHHhh-cCeEEEEeccCCCCCCCCCCCCCC---CccCCCCchHHHHHHH
Q 014490 342 LHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSP---YFRVNEDALPYGAALH 417 (423)
Q Consensus 342 ~~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pg~~~~~H~~---~E~i~~~~l~~~~~~~ 417 (423)
+++.+.+.++.. |... ......+.+|...|.+. +|++.+...... .....|++ -++++.+.|.+.++++
T Consensus 351 ~~~~~~~~~~~~-g~~~--~~~~~~~~SD~~~f~~~GiP~~~l~~~~~~----~~~~yHt~~Dt~d~id~~~l~~~~~~~ 423 (444)
T 3iib_A 351 PVINAMKVAEPL-GVAA--GNNKASGGPDVSMLPALGVPVASLRQDGSD----YFDYHHTPNDTLDKINPEALAQNVAVY 423 (444)
T ss_dssp HHHHHGGGGGGG-TCEE--CCSCCCCCGGGTTSGGGTCCEEEEEECCTT----GGGTTTSTTCCGGGSCHHHHHHHHHHH
T ss_pred HHHHHHHHHhhc-CCcc--ccCCCCCCCccHHHHHCCCCEEEeecCCCc----CCCCCCCCccccccCCHHHHHHHHHHH
Confidence 444444444333 4432 23456778999888888 998876553221 01357888 5789999999999988
Q ss_pred HHHHh
Q 014490 418 ASLAT 422 (423)
Q Consensus 418 ~~~i~ 422 (423)
+.++.
T Consensus 424 ~~~v~ 428 (444)
T 3iib_A 424 AQFAW 428 (444)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87764
No 81
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=55.76 E-value=22 Score=36.80 Aligned_cols=52 Identities=23% Similarity=0.275 Sum_probs=41.7
Q ss_pred ccchHHHHhhcCchhHHHHHHHHHHhHhCCCCCCCc--HHHHHHHHHHHHhCCCC-eEe
Q 014490 34 QIPVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQE--FETSKLIRAELDQMGIP-YKF 89 (423)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~E--~~~~~~l~~~l~~~g~~-~~~ 89 (423)
.+.+.+.+.++. +.+.+.++.+.++|-.+|.+ .++++|+++.|+++|++ ++.
T Consensus 13 ~l~~~~~~~~~~----~~i~~~l~~lt~~ph~aGt~~~~~~a~yi~~~~~~~Gl~~v~~ 67 (707)
T 3fed_A 13 SIRWKLVSEMKA----ENIKSFLRSFTKLPHLAGTEQNFLLAKKIQTQWKKFGLDSAKL 67 (707)
T ss_dssp CHHHHHHHHCCH----HHHHHHHHHHSSSCCCTTSHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHhCCH----HHHHHHHHHHhcCCCcCCCHhHHHHHHHHHHHHHHcCCCceeE
Confidence 445566666665 66888999999999998864 77899999999999999 543
No 82
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=55.50 E-value=28 Score=31.55 Aligned_cols=80 Identities=10% Similarity=0.032 Sum_probs=47.4
Q ss_pred CHHHHHHHHHHHHHhc-CCcccccCCCCCCCchHHHHHhh-cCeEEEEeccCCCCCCCCCCCCCCCccCCCCch-----H
Q 014490 339 NKNLHEHFQKVAADML-GVQNIKENRPLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPYFRVNEDAL-----P 411 (423)
Q Consensus 339 d~~~~~~l~~~~~~~~-g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l-----~ 411 (423)
++.+.+.+++.+++.. +...... ....+++|...|.+. +|++.+...... +.....|++.+.++.-+. .
T Consensus 198 ~~~l~~~l~~~a~~~~~~i~~~~~-~~~~~~sD~~~f~~~GiP~~~~~~~~~~---~~~~~yHt~~Dt~~~~d~~~~~~~ 273 (299)
T 1rtq_A 198 DSNFTQYLTQLMDEYLPSLTYGFD-TCGYACSDHASWHNAGYPAAMPFESKFN---DYNPRIHTTQDTLANSDPTGSHAK 273 (299)
T ss_dssp CHHHHHHHHHHHHHHCTTCCEEEE-CCSSCCSTHHHHHHTTCCEECEESSCGG---GSCTTTTSTTCCGGGSCTTCHHHH
T ss_pred CchHHHHHHHHHHHhCccCCcccC-CCCCCCCcHHHHHHCCCCEEEecccccc---cCCCCCCCccccccccCccHHHHH
Confidence 4567777777776652 2222111 123367898888777 998755432111 011358999988766654 6
Q ss_pred HHHHHHHHHHh
Q 014490 412 YGAALHASLAT 422 (423)
Q Consensus 412 ~~~~~~~~~i~ 422 (423)
+.+++.+.++.
T Consensus 274 ~~~~l~~~~~~ 284 (299)
T 1rtq_A 274 KFTQLGLAYAI 284 (299)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 67777776654
No 83
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=54.20 E-value=13 Score=35.69 Aligned_cols=48 Identities=10% Similarity=0.160 Sum_probs=36.9
Q ss_pred HHHHhhcCchhHHHHHHHHHHhHhCCCCCCCc--HHHHHHHHHHHHhCCCCeEe
Q 014490 38 KFLDFAKKPEIFYWMVNIRRKIHENPELGFQE--FETSKLIRAELDQMGIPYKF 89 (423)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~E--~~~~~~l~~~l~~~g~~~~~ 89 (423)
++.+.++. +++.+.++.|.+.|..++.+ .++++||.++|+++|+++..
T Consensus 8 ~~~~~i~~----~~~~~~l~~Ls~~~R~~Gs~g~~~a~~yi~~~~~~~Gl~~~~ 57 (421)
T 2ek8_A 8 QITKRTDA----ENMYNTIQFLSQAPRVAGSPEELKAVRYIEQQFKSYGYHVEV 57 (421)
T ss_dssp HHHTTCCH----HHHHHHHHHHTTSCCCTTSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHhhCCH----HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHCCCceEE
Confidence 45555544 56777888888888777764 78999999999999997644
No 84
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=50.15 E-value=35 Score=31.22 Aligned_cols=80 Identities=14% Similarity=0.068 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHhcCCccc-ccCCCCCCCchHHHHHh-h-cCeEEEEec-cCCCCCCCCCCCCCCC---ccCCCCchHHH
Q 014490 341 NLHEHFQKVAADMLGVQNI-KENRPLMGTEDFSFFAE-A-IPGYFYYLG-MNDETKGKFETGHSPY---FRVNEDALPYG 413 (423)
Q Consensus 341 ~~~~~l~~~~~~~~g~~~~-~~~~~~~g~tD~~~~~~-~-ip~~~~~~g-~~~~~pg~~~~~H~~~---E~i~~~~l~~~ 413 (423)
.+.+.+.+.++.+ |.... .........+|...|.+ . +|++.+... +... -+.....|+++ |+|+.+.|.+.
T Consensus 221 ~l~~~~~~~a~~~-g~~~~f~~~~~g~~~sDh~~f~~~~GiP~~~li~~~~~~~-~~~~~~~Ht~~Dt~d~id~~~l~~~ 298 (309)
T 3tc8_A 221 PIVEMVWSAARDL-GYGKYFINAAGGAITDDHQYVISGRNIPSIDIINYDPESK-TGFASYWHTQKDNMENIDRETLKAA 298 (309)
T ss_dssp HHHHHHHHHHHHH-TCTTTEEEEECCCCCCHHHHHHHHHCCCEEEEEBCCTTSS-SSSCTTTTSTTCSGGGBCHHHHHHH
T ss_pred HHHHHHHHHHHHc-CCcceeccCCCCCCCCccHHHHhcCCCCEEEEecccCccc-CCCCCCCCCCcCChhhCCHHHHHHH
Confidence 3556666666665 65321 11112234689888988 6 998765321 1000 01235689999 99999999999
Q ss_pred HHHHHHHHh
Q 014490 414 AALHASLAT 422 (423)
Q Consensus 414 ~~~~~~~i~ 422 (423)
.++...++.
T Consensus 299 ~~~~~~~vy 307 (309)
T 3tc8_A 299 GQTVLEVIY 307 (309)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999988875
No 85
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=49.78 E-value=27 Score=34.27 Aligned_cols=49 Identities=14% Similarity=0.108 Sum_probs=39.7
Q ss_pred CceEEEEEEecCCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcC
Q 014490 266 SQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQR 320 (423)
Q Consensus 266 ~~t~~v~~i~gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~ 320 (423)
..++|++.++- -++++++.+++|+++..+.+++.++++++++.......
T Consensus 347 ~~S~n~gv~~~------~~~~~~~~~~~R~~~~~~~~~i~~~l~~~~~~~g~~~~ 395 (490)
T 3mru_A 347 ETSLNVGVITT------EENKVTVLCLIRSLIDSGRSQVEGMLQSVAELAGAQIE 395 (490)
T ss_dssp EEEEEEEEEEE------ETTEEEEEEEEEESSHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred eEEEEEEEEEE------eCCEEEEEEEcCCCCchHHHHHHHHHHHHHHHcCCeEE
Confidence 56778888753 26789999999999999999999999999976544433
No 86
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=31.79 E-value=85 Score=21.07 Aligned_cols=36 Identities=14% Similarity=0.177 Sum_probs=24.4
Q ss_pred EEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEe
Q 014490 290 GGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTF 327 (423)
Q Consensus 290 ~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~ 327 (423)
.+|+|+ .+.+.+..++.+++.+++ +.++...+++..
T Consensus 2 emdirf-rgddleafekalkemirq-arkfagtvtytl 37 (85)
T 2kl8_A 2 EMDIRF-RGDDLEAFEKALKEMIRQ-ARKFAGTVTYTL 37 (85)
T ss_dssp EEEEEE-ECSSHHHHHHHHHHHHHH-HTTTTCEEEEEE
T ss_pred ccceee-cCCcHHHHHHHHHHHHHH-HHhhcceEEEEe
Confidence 345653 367788899999999886 455555566554
No 87
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=30.08 E-value=35 Score=34.83 Aligned_cols=50 Identities=6% Similarity=0.113 Sum_probs=36.0
Q ss_pred cchHHHHhhcCchhHHHHHHHHHHhHh---CCCCCCC--cHHHHHHHHHHHHhCCCCeE
Q 014490 35 IPVKFLDFAKKPEIFYWMVNIRRKIHE---NPELGFQ--EFETSKLIRAELDQMGIPYK 88 (423)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~l~~---ips~s~~--E~~~~~~l~~~l~~~g~~~~ 88 (423)
+.+.+.+.++..+ +.+.++.|.+ -|...|. +.++++||.++|+++|++..
T Consensus 7 l~~~l~~~i~~~~----i~~~L~~Lssd~~~~R~aGT~g~~~aa~yI~~~f~~~Gl~~v 61 (640)
T 3kas_A 7 LKRKLSEKLDSTD----FTSTIKLLNENSYVPREAGSQKDENLALYVENQFREFKLSKV 61 (640)
T ss_dssp HHHHHHHHHHTCC----HHHHHHHTTSTTTSSCCTTSHHHHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHhCCHHH----HHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHHHHcCCccc
Confidence 3445666676644 6666777777 3555554 47899999999999999843
No 88
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=26.55 E-value=58 Score=29.57 Aligned_cols=52 Identities=10% Similarity=0.068 Sum_probs=36.5
Q ss_pred CCCCchHHHHHhh-cCeEEEEeccCCCCCCCCCCCCCCC---ccCCCCchHHHHHHHHHHHh
Q 014490 365 LMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPY---FRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 365 ~~g~tD~~~~~~~-ip~~~~~~g~~~~~pg~~~~~H~~~---E~i~~~~l~~~~~~~~~~i~ 422 (423)
..+.+|-..|.+. +|++.+...... ..-|+++ |+|+.+.|.+..+++..++.
T Consensus 240 ~~~~SDH~pF~~~GIP~l~~~~~~~~------~~yHt~~Dt~d~id~~~l~~~~~i~~~fv~ 295 (312)
T 4f9u_A 240 GLVDDDHRPFLDENVPVLHLVATPFP------DVWHTPRDNAANLHWPSIRNFNRVFRNFVY 295 (312)
T ss_dssp SCCCCTTHHHHTTTCCEEEEECSSCC------TTTTSTTCSGGGCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCchHHHHHCCCCEEEEECCCCC------CCCCCCccChhhCCHHHHHHHHHHHHHHHH
Confidence 3445788888877 998876544221 2367776 56888889988888887764
No 89
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=25.41 E-value=1.4e+02 Score=29.37 Aligned_cols=68 Identities=15% Similarity=0.105 Sum_probs=44.3
Q ss_pred HHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEe---------------cccCceEEEEE-CCC---CCcEEEE
Q 014490 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKF---------------PVAVTGVVGYI-GTG---QPPFVAL 110 (423)
Q Consensus 50 ~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~---------------~~~~~nvia~~-~~~---~~~~ill 110 (423)
+.+.++.++++.+=+-|..+..+.+++.+.|++.||.--. ..++..++|.. ++. ...--++
T Consensus 33 ~~~~~~a~~~~~Fl~~spT~~hav~~~~~~L~~aGF~~L~e~~~w~l~~ggkyyv~rn~ssliAf~vg~~~~~~~G~~iv 112 (496)
T 3vat_A 33 EAVQAAARELLKFVNRSPSPFHAVAECRSRLLQAGFHELKETESWDIKPESKYFLTRNSSTIIAFAVGGQYVPGNGFSLI 112 (496)
T ss_dssp HHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHTTCEECCTTSCCCCCTTCEEEEEETTTEEEEEEECTTCCTTCCEEEE
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCcCeEccccCCcccCCCCEEEEECCCcEEEEEEeCCCCCCCCCeEEE
Confidence 4445555566666566677899999999999999996411 11223566653 433 1245688
Q ss_pred EEecccc
Q 014490 111 RADMDAL 117 (423)
Q Consensus 111 ~~H~Dtv 117 (423)
.+|+|.=
T Consensus 113 gaHtDSP 119 (496)
T 3vat_A 113 GAHTDSP 119 (496)
T ss_dssp EEECCCC
T ss_pred EEeccCC
Confidence 9999973
No 90
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7}
Probab=22.42 E-value=1.3e+02 Score=30.00 Aligned_cols=61 Identities=11% Similarity=0.131 Sum_probs=38.3
Q ss_pred HHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEe---------------cccCceEEEEE-CCC--CC-c-EEEEEEecc
Q 014490 56 RRKIHENPELGFQEFETSKLIRAELDQMGIPYKF---------------PVAVTGVVGYI-GTG--QP-P-FVALRADMD 115 (423)
Q Consensus 56 ~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~---------------~~~~~nvia~~-~~~--~~-~-~ill~~H~D 115 (423)
.++++.+=.-|..+..+.+++.++|++.||.--. .....+++|.. +.. .+ . --++.+|+|
T Consensus 10 a~~~~~Fl~~spT~~HaV~~~~~~L~~aGF~~L~E~~~W~l~~Ggkyy~~rn~ssiiAf~vG~~~~~~~G~~~IvgAHtD 89 (571)
T 4eme_A 10 AQDALKFIQRSGSNFLACKNLKERLENNGFINLSEGETWNLNKNEGYVLCKENRNICGFFVGKNFNIDTGSILISIGHID 89 (571)
T ss_dssp HHHHHHHHHHCCSHHHHHHHHHHHHHHTTCEECCTTSCCCCCTTCEEEEEETTTEEEEEEECTTCCTTTCCEEEEEEECC
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHCcCEEccccCCcccCCCCEEEEEcCCCEEEEEEeCCcCCCCCCcEEEEEEecc
Confidence 3334333334455699999999999999996321 11233566654 433 12 3 568899999
Q ss_pred c
Q 014490 116 A 116 (423)
Q Consensus 116 t 116 (423)
.
T Consensus 90 S 90 (571)
T 4eme_A 90 S 90 (571)
T ss_dssp C
T ss_pred C
Confidence 8
No 91
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=21.03 E-value=89 Score=28.83 Aligned_cols=53 Identities=11% Similarity=-0.006 Sum_probs=38.0
Q ss_pred CCCCCchHHHHHhh-cCeEEEEeccCCCCCCCCCCCCCCC---ccCCCCchHHHHHHHHHHHh
Q 014490 364 PLMGTEDFSFFAEA-IPGYFYYLGMNDETKGKFETGHSPY---FRVNEDALPYGAALHASLAT 422 (423)
Q Consensus 364 ~~~g~tD~~~~~~~-ip~~~~~~g~~~~~pg~~~~~H~~~---E~i~~~~l~~~~~~~~~~i~ 422 (423)
...+.+|-..|.+. +|++.+...+. ....|++. |+|+.+.+.+.+++...++.
T Consensus 269 ~~~~~SDH~pF~~~GIP~~~~~~~~f------~~~yHt~~Dt~d~id~~~l~~~~~i~~~fv~ 325 (330)
T 3pb6_X 269 FGSVEDDHIPFLRRGVPVLHLISTPF------PAVWHTPADTEVNLHPPTVHNLCRILAVFLA 325 (330)
T ss_dssp SCCCSCTTHHHHTTTCCEEEEECSSC------CTTTTSTTCSGGGSCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCchHhHHHCCCCEEEEEcCCC------CCCCCCCcCchhhCCHHHHHHHHHHHHHHHH
Confidence 34567898888888 99876653221 13467776 56888899999999888875
Done!