Query 014491
Match_columns 423
No_of_seqs 108 out of 790
Neff 2.6
Searched_HMMs 29240
Date Mon Mar 25 12:32:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014491.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014491hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1hbk_A ACBP, acyl-COA binding 100.0 4.8E-31 1.7E-35 213.8 10.9 88 315-405 2-89 (89)
2 3fp5_A Acyl-COA binding protei 100.0 3.6E-31 1.2E-35 222.3 10.1 103 314-420 3-105 (106)
3 1st7_A ACBP, acyl-COA-binding 100.0 4.5E-31 1.5E-35 212.8 7.6 85 315-404 1-85 (86)
4 2cop_A Acyl-coenzyme A binding 100.0 1.4E-30 4.7E-35 219.0 9.9 92 311-407 4-95 (109)
5 3epy_A Acyl-COA-binding domain 100.0 2.4E-30 8.2E-35 210.7 9.2 86 314-404 3-88 (89)
6 2cb8_A Acyl-COA-binding protei 100.0 1.1E-29 3.7E-34 205.6 8.9 84 316-404 3-86 (87)
7 2cqu_A Peroxisomal D3,D2-enoyl 100.0 2.4E-29 8.3E-34 214.2 10.3 91 312-407 13-103 (116)
8 2wh5_A Acyl-COA-binding domain 100.0 1.5E-29 5.3E-34 212.2 8.4 94 311-405 4-97 (106)
9 2lbb_A Acyl COA binding protei 100.0 1.9E-29 6.5E-34 208.9 8.8 85 317-405 12-96 (96)
10 3flv_A Acyl-COA-binding domain 100.0 2.1E-29 7.1E-34 216.0 8.5 93 311-404 20-112 (119)
11 1mix_A Talin; focal adhesion, 98.2 7.4E-06 2.5E-10 70.8 9.4 84 315-404 18-115 (206)
12 4f7g_A Talin-1; alpha-helix bu 94.9 0.038 1.3E-06 49.0 5.9 85 314-404 28-126 (222)
13 1ef1_A Moesin; membrane, FERM 94.8 0.057 2E-06 49.2 6.8 84 316-405 97-200 (294)
14 3qij_A Protein 4.1; cytoskelet 94.6 0.074 2.5E-06 49.5 7.3 80 319-404 114-205 (296)
15 1h4r_A Merlin; FERM, neurofibr 94.5 0.064 2.2E-06 49.5 6.7 81 318-404 119-219 (314)
16 3ivf_A Talin-1; FERM domain, c 93.5 0.18 6.1E-06 47.9 7.6 83 316-404 184-280 (371)
17 2i1j_A Moesin; FERM, coiled-co 92.2 0.24 8.2E-06 51.0 7.1 82 318-405 102-203 (575)
18 3au4_A Myosin-X; protein-prote 90.6 0.93 3.2E-05 45.3 9.2 85 315-405 321-452 (555)
19 2al6_A Focal adhesion kinase 1 86.7 0.98 3.3E-05 43.4 6.1 85 315-404 114-224 (375)
20 4dxa_B KREV interaction trappe 85.1 0.71 2.4E-05 43.1 4.2 81 318-404 117-222 (322)
21 4eku_A Protein-tyrosine kinase 74.3 4.3 0.00015 39.9 5.8 89 312-406 131-246 (392)
22 3pvl_A Myosin VIIA isoform 1; 74.0 7.3 0.00025 40.8 7.8 83 317-404 372-476 (655)
23 2j0j_A Focal adhesion kinase 1 31.0 42 0.0014 34.1 4.4 62 337-398 132-219 (656)
No 1
>1hbk_A ACBP, acyl-COA binding protein; fatty acid metabolism; HET: COA MYR; 2.0A {Plasmodium falciparum} SCOP: a.11.1.1
Probab=99.97 E-value=4.8e-31 Score=213.76 Aligned_cols=88 Identities=28% Similarity=0.520 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCChhhHHHHHHhhhccccCCCCCCCCCCccHhhHHHHHHHHhcCCCCHHHHHHHHHH
Q 014491 315 LERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVT 394 (423)
Q Consensus 315 LEErFkaAVefVKsLPk~G~isqpS~DdKLeLYALYKQATvGDCNtPRPG~fD~vgRaKWnAWKALKGMSKEEAMrKYIE 394 (423)
|+++|.+|+.+|+.++.. ..|+++++|+|||||||||+|||++++||+||+++|+||+||++++|||+++||++||+
T Consensus 2 l~~~F~~A~~~v~~l~~~---~~~~~~~~L~LYalyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~gms~eeA~~~YI~ 78 (89)
T 1hbk_A 2 MAQVFEECVSFINGLPRT---INLPNELKLDLYKYYKQSTIGNCNIKEPSAHKYIDRKKYEAWKSVENLNREDAQKRYVD 78 (89)
T ss_dssp HHHHHHHHHHHHHHSCTT---CCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTSHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCCc---CCCCHHHHHHHHHHHHHhhcCCCCCCCCCccCHHhHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 678999999999999852 37999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccCccc
Q 014491 395 ILSRSIPGCIQ 405 (423)
Q Consensus 395 LVEELlP~W~a 405 (423)
+|++++|.|.+
T Consensus 79 ~v~~l~~~~~~ 89 (89)
T 1hbk_A 79 IVSEIFPYWQD 89 (89)
T ss_dssp HHHHHCTTTTC
T ss_pred HHHHHcccccC
Confidence 99999999964
No 2
>3fp5_A Acyl-COA binding protein; ACBP, cacao disease, fatty acid metabolism, lipid binding protein; HET: MES; 1.61A {Moniliophthora perniciosa} SCOP: a.11.1.0
Probab=99.97 E-value=3.6e-31 Score=222.30 Aligned_cols=103 Identities=22% Similarity=0.381 Sum_probs=95.5
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChhhHHHHHHhhhccccCCCCCCCCCCccHhhHHHHHHHHhcCCCCHHHHHHHHH
Q 014491 314 ELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYV 393 (423)
Q Consensus 314 eLEErFkaAVefVKsLPk~G~isqpS~DdKLeLYALYKQATvGDCNtPRPG~fD~vgRaKWnAWKALKGMSKEEAMrKYI 393 (423)
.++++|.+|+.+|+.++..|+ .+|+++++|+|||||||||+|||+.++||+||+++|+||+||++++|||+++||++||
T Consensus 3 ~~~~~F~~A~~~vk~l~~~g~-~~ps~~~~L~LYalyKQAt~Gd~~~~~Pg~~d~~~raKw~AW~~l~gmS~eeA~~~YI 81 (106)
T 3fp5_A 3 MSKAKFDKAVEIVQSLPKDGP-IKPTQDEQLYFYKYFKQATVGDVNISRPGLMDFTGKAKWDAWKSVEGTSKEVAYQKYV 81 (106)
T ss_dssp CCHHHHHHHHHHHHHCCSSSS-SCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTCHHHHHHHHHHHTTTTCCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhcccccC-CCCCHHHHHHHHHHHHHHhcCCCCCCCCCccchHHHHHHHHHHHccCCCHHHHHHHHH
Confidence 357899999999999997653 4799999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccCcccchhhHHHHHHHHhhh
Q 014491 394 TILSRSIPGCIQDGIGILNRFLQMLKR 420 (423)
Q Consensus 394 ELVEELlP~W~a~~tsvAnefLq~l~~ 420 (423)
++|++++|. .++..|+++|++|..
T Consensus 82 ~~v~~l~~~---~~~~~~~~~~~~le~ 105 (106)
T 3fp5_A 82 EKLLEILKK---ADTEESKKYIAEIEA 105 (106)
T ss_dssp HHHHHHHHH---HCSHHHHHHHHHHHH
T ss_pred HHHHHHhcc---cCcHHHHHHHHHHhc
Confidence 999999998 466689999999975
No 3
>1st7_A ACBP, acyl-COA-binding protein; four helix bundle, transport protein; NMR {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.5e-31 Score=212.82 Aligned_cols=85 Identities=26% Similarity=0.443 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCChhhHHHHHHhhhccccCCCCCCCCCCccHhhHHHHHHHHhcCCCCHHHHHHHHHH
Q 014491 315 LERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVT 394 (423)
Q Consensus 315 LEErFkaAVefVKsLPk~G~isqpS~DdKLeLYALYKQATvGDCNtPRPG~fD~vgRaKWnAWKALKGMSKEEAMrKYIE 394 (423)
|+++|.+|+.+|+.++. .|+++++|+|||||||||+|||++++||+||+++|+||+||++++|||+++||++||+
T Consensus 1 l~~~F~~A~~~v~~l~~-----~~~~~~~L~lYalyKQAt~Gd~~~~~Pg~~d~~~raKw~AW~~l~gms~eeA~~~YI~ 75 (86)
T 1st7_A 1 VSQLFEEKAKAVNELPT-----KPSTDELLELYALYKQATVGDNDKEKPGIFNMKDRYKWEAWENLKGKSQEDAEKEYIA 75 (86)
T ss_dssp CHHHHHHHHHHHTSCSS-----CCCHHHHHHHHHHHHHHHHCSCCCCCCCSSCHHHHHHHHHHHTTTTTHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHccC-----CcCHHHHHHHHHHHHHHhhCCCCCCCCCccCHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 46899999999999984 6899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccCcc
Q 014491 395 ILSRSIPGCI 404 (423)
Q Consensus 395 LVEELlP~W~ 404 (423)
+|++++|.|.
T Consensus 76 ~v~~l~~~~~ 85 (86)
T 1st7_A 76 LVDQLIAKYS 85 (86)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHhhhhc
Confidence 9999999985
No 4
>2cop_A Acyl-coenzyme A binding domain containing 6; acyl COA binding protein, COA binding protein, lipid binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.97 E-value=1.4e-30 Score=219.00 Aligned_cols=92 Identities=27% Similarity=0.542 Sum_probs=87.1
Q ss_pred ccchHHHHHHHHHHHHhcccCCCCCCCCChhhHHHHHHhhhccccCCCCCCCCCCccHhhHHHHHHHHhcCCCCHHHHHH
Q 014491 311 ERTELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAME 390 (423)
Q Consensus 311 esdeLEErFkaAVefVKsLPk~G~isqpS~DdKLeLYALYKQATvGDCNtPRPG~fD~vgRaKWnAWKALKGMSKEEAMr 390 (423)
+..+|+++|.+|+.+|+.++. .|+++++|+|||||||||+|||++++|++||+++|+||+||++++|||+++||+
T Consensus 4 ~~~~l~~~F~~A~~~vk~l~~-----~p~~~~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~~raKw~AW~~l~gms~eeAm~ 78 (109)
T 2cop_A 4 GSSGLAELFEKAAAHLQGLIQ-----VASREQLLYLYARYKQVKVGNCNTPKPSFFDFEGKQKWEAWKALGDSSPSQAMQ 78 (109)
T ss_dssp CCCCSHHHHHHHHHHHTTSTT-----TSCHHHHHHHHHHHHHHHTCSCCSCCCCSSCHHHHHHHHHHHSCTTCCHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHccc-----CCCHHHHHHHHHHHHHhhcCCCCCCCCCccCHHHHHHHHHHHHhcCCCHHHHHH
Confidence 466789999999999999874 689999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccCcccch
Q 014491 391 QYVTILSRSIPGCIQDG 407 (423)
Q Consensus 391 KYIELVEELlP~W~a~~ 407 (423)
+||++|++++|.|....
T Consensus 79 ~YI~lv~~l~~~~~~~~ 95 (109)
T 2cop_A 79 EYIAVVKKLDPGWNPQI 95 (109)
T ss_dssp HHHHHHHHHCTTCCCCC
T ss_pred HHHHHHHHHhhhhcccc
Confidence 99999999999998664
No 5
>3epy_A Acyl-COA-binding domain-containing protein 7; acyl-COA binding protein, fatty acid, lipid metabolism, structural genomics; HET: COA PLM; 2.00A {Homo sapiens} SCOP: a.11.1.1
Probab=99.96 E-value=2.4e-30 Score=210.73 Aligned_cols=86 Identities=26% Similarity=0.312 Sum_probs=82.4
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChhhHHHHHHhhhccccCCCCCCCCCCccHhhHHHHHHHHhcCCCCHHHHHHHHH
Q 014491 314 ELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYV 393 (423)
Q Consensus 314 eLEErFkaAVefVKsLPk~G~isqpS~DdKLeLYALYKQATvGDCNtPRPG~fD~vgRaKWnAWKALKGMSKEEAMrKYI 393 (423)
.|+++|.+|+.+|+.++. .|+++++|+|||||||||+|||+.++|++||+++|+||+||++++|||+++||++||
T Consensus 3 ~L~~~F~~A~~~vk~l~~-----~p~~~~~L~lYalyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~g~s~eeA~~~Yi 77 (89)
T 3epy_A 3 ALQADFDRAAEDVRKLKA-----RPDDGELKELYGLYKQAIVGDINIACPGMLDLKGKAKWEAWNLKKGLSTEDATSAYI 77 (89)
T ss_dssp HHHHHHHHHHHHGGGCSS-----CCCHHHHHHHHHHHHHHHTCSCCSCCTTTTCHHHHHHHHHHHTTTTCCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHcCC-----CcCHHHHHHHHHHHHHHhhCCCCCCCCcccchHHHHHHHHHHHhhCCCHHHHHHHHH
Confidence 489999999999999974 689999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccCcc
Q 014491 394 TILSRSIPGCI 404 (423)
Q Consensus 394 ELVEELlP~W~ 404 (423)
++|++++|.|.
T Consensus 78 ~~v~~l~~ky~ 88 (89)
T 3epy_A 78 SKAKELIEKYG 88 (89)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHhhhhc
Confidence 99999999874
No 6
>2cb8_A Acyl-COA-binding protein; acyl-coenzyme A binding protein, fatty acid, acetylation, alternative splicing, lipid-binding, transport; HET: MYA; 1.4A {Homo sapiens} PDB: 2fj9_A 1aca_A* 1hb6_A 1hb8_A 1nti_A 1nvl_A* 2abd_A 2fdq_A
Probab=99.96 E-value=1.1e-29 Score=205.64 Aligned_cols=84 Identities=25% Similarity=0.366 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCChhhHHHHHHhhhccccCCCCCCCCCCccHhhHHHHHHHHhcCCCCHHHHHHHHHHH
Q 014491 316 ERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVTI 395 (423)
Q Consensus 316 EErFkaAVefVKsLPk~G~isqpS~DdKLeLYALYKQATvGDCNtPRPG~fD~vgRaKWnAWKALKGMSKEEAMrKYIEL 395 (423)
+++|.+|+.+|+.++. .|+++++|+|||||||||+|||+.++||+||+++|+||+||++++|||+++||++||++
T Consensus 3 ~~~F~~A~~~vk~l~~-----~~~~~~~L~lYalyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~gms~eeA~~~Yi~~ 77 (87)
T 2cb8_A 3 QAEFEKAAEEVRHLKT-----KPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINK 77 (87)
T ss_dssp HHHHHHHHHHGGGCSS-----CCCHHHHHHHHHHHHHHHTCSCCSCCCCTTCHHHHHHHHHHHTTTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccC-----CcCHHHHHHHHHHHHhhhhCCCCCCCCCcccHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 6799999999999985 68999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccCcc
Q 014491 396 LSRSIPGCI 404 (423)
Q Consensus 396 VEELlP~W~ 404 (423)
|++++|.|.
T Consensus 78 v~~l~~~~~ 86 (87)
T 2cb8_A 78 VEELKKKYG 86 (87)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhC
Confidence 999999874
No 7
>2cqu_A Peroxisomal D3,D2-enoyl-COA isomerase; acyl-COA binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.96 E-value=2.4e-29 Score=214.19 Aligned_cols=91 Identities=31% Similarity=0.558 Sum_probs=85.7
Q ss_pred cchHHHHHHHHHHHHhcccCCCCCCCCChhhHHHHHHhhhccccCCCCCCCCCCccHhhHHHHHHHHhcCCCCHHHHHHH
Q 014491 312 RTELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQ 391 (423)
Q Consensus 312 sdeLEErFkaAVefVKsLPk~G~isqpS~DdKLeLYALYKQATvGDCNtPRPG~fD~vgRaKWnAWKALKGMSKEEAMrK 391 (423)
+.+++++|..|+.+|+.++. .|+++++|+|||||||||+|||+.++|++||+++|+||+||++++|||+++||++
T Consensus 13 m~~~~~~F~~A~~~vk~l~~-----~p~~~~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~graKw~AW~~l~gms~eeAm~~ 87 (116)
T 2cqu_A 13 MRASQKDFENSMNQVKLLKK-----DPGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDAWNALGSLPKEAARQN 87 (116)
T ss_dssp CCCCHHHHHHHHHHHHHCCS-----CCCHHHHHHHHHHHTTTTTCSCCSCCCCTTCHHHHHHHHHHHHHCSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHccC-----CCCHHHHHHHHHHHHHHhcCCCCCCCCCcccHHHHHHHHHHHHhcCCCHHHHHHH
Confidence 44578999999999999985 5899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccCcccch
Q 014491 392 YVTILSRSIPGCIQDG 407 (423)
Q Consensus 392 YIELVEELlP~W~a~~ 407 (423)
||++|++++|.|.+..
T Consensus 88 YI~lv~~l~~~~~~~~ 103 (116)
T 2cqu_A 88 YVDLVSSLSPSLESSS 103 (116)
T ss_dssp HHHHHHHHCSCCCCCC
T ss_pred HHHHHHHHcccccccc
Confidence 9999999999997654
No 8
>2wh5_A Acyl-COA-binding domain-containing protein 4; alternative splicing, fatty acid metabolism, lipid transport, lipid binding protein; HET: STE ST9 COA; 2.60A {Homo sapiens}
Probab=99.96 E-value=1.5e-29 Score=212.20 Aligned_cols=94 Identities=30% Similarity=0.511 Sum_probs=83.8
Q ss_pred ccchHHHHHHHHHHHHhcccCCCCCCCCChhhHHHHHHhhhccccCCCCCCCCCCccHhhHHHHHHHHhcCCCCHHHHHH
Q 014491 311 ERTELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAME 390 (423)
Q Consensus 311 esdeLEErFkaAVefVKsLPk~G~isqpS~DdKLeLYALYKQATvGDCNtPRPG~fD~vgRaKWnAWKALKGMSKEEAMr 390 (423)
+..+|+++|.+|+.+|+.++..|. .+|+++++|+|||||||||+|||+.++||+||+++|+||+||++++|||+++||+
T Consensus 4 ~~~~l~~~F~~A~~~vk~l~~~g~-~~ps~e~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~gms~eeA~~ 82 (106)
T 2wh5_A 4 PEPDCQKQFQAAVSVIQNLPKNGS-YRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDAWNSLGKMSREEAMS 82 (106)
T ss_dssp -----CHHHHHHHHHHHHSCSSCS-CCCCHHHHHHHHHHHHHHHHCSCCSCCCCTTCHHHHHHHHHHHTTTTCCHHHHHH
T ss_pred cchHHHHHHHHHHHHHHhccccCC-CCCCHHHHHHHHHHHhhhccCCCCCCCCCcccHHHHHHHHHHHHhcCCCHHHHHH
Confidence 456788999999999999997553 4699999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccCccc
Q 014491 391 QYVTILSRSIPGCIQ 405 (423)
Q Consensus 391 KYIELVEELlP~W~a 405 (423)
+||+++++++|.+..
T Consensus 83 ~YI~~v~~l~~k~~~ 97 (106)
T 2wh5_A 83 AYITEMKLVAQKVID 97 (106)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhhc
Confidence 999999999998754
No 9
>2lbb_A Acyl COA binding protein; protein binding, structural genomi seattle structural genomics center for infectious disease,; NMR {Babesia bovis}
Probab=99.96 E-value=1.9e-29 Score=208.90 Aligned_cols=85 Identities=35% Similarity=0.594 Sum_probs=80.7
Q ss_pred HHHHHHHHHHhcccCCCCCCCCChhhHHHHHHhhhccccCCCCCCCCCCccHhhHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 014491 317 RLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVTIL 396 (423)
Q Consensus 317 ErFkaAVefVKsLPk~G~isqpS~DdKLeLYALYKQATvGDCNtPRPG~fD~vgRaKWnAWKALKGMSKEEAMrKYIELV 396 (423)
.+|++|+..|++++. ..|+++++|+|||||||||+|||++++||+||+++|+||+||++++|||+++||++||++|
T Consensus 12 ~~F~~A~~~vk~l~~----~~ps~~~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~graKw~AW~~l~gmS~eeAm~~YI~lv 87 (96)
T 2lbb_A 12 DDFDAAVKYVSNTTT----MMASNDDKLCFYKYYKQATVGDCNKPKPGMLQLQEKYKWEAWNALRGMSTESAKEAYVKLL 87 (96)
T ss_dssp STHHHHHHHHHHCCC----SCCCTTTTTHHHHHHHHTTTSSCCCCCCCSSCSHHHHHHHHHHHTTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCC----CCCCHHHHHHHHHHHHHHhcCCCCCCCCCcccHHhHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 379999999999984 2689999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccCccc
Q 014491 397 SRSIPGCIQ 405 (423)
Q Consensus 397 EELlP~W~a 405 (423)
++++|.|.+
T Consensus 88 ~~l~~~~~~ 96 (96)
T 2lbb_A 88 DTLAPSWRN 96 (96)
T ss_dssp HHHCGGGTC
T ss_pred HHHhchhcC
Confidence 999999964
No 10
>3flv_A Acyl-COA-binding domain-containing protein 5; lipid binding, structural genomics, struct genomics consortium, SGC, lipid-binding, membrane; HET: STE COA; 1.70A {Homo sapiens}
Probab=99.96 E-value=2.1e-29 Score=216.03 Aligned_cols=93 Identities=30% Similarity=0.462 Sum_probs=86.1
Q ss_pred ccchHHHHHHHHHHHHhcccCCCCCCCCChhhHHHHHHhhhccccCCCCCCCCCCccHhhHHHHHHHHhcCCCCHHHHHH
Q 014491 311 ERTELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAME 390 (423)
Q Consensus 311 esdeLEErFkaAVefVKsLPk~G~isqpS~DdKLeLYALYKQATvGDCNtPRPG~fD~vgRaKWnAWKALKGMSKEEAMr 390 (423)
.+.+|+++|.+|+.+|+.++..|. .+|+++++|+|||||||||+|||+.++|++||+++|+||+||++++|||+++||+
T Consensus 20 ~~~dLe~~F~~A~~~Vk~l~~~g~-~~ps~d~~L~LYaLyKQAT~Gd~~~~~Pg~~d~~graKw~AW~~l~gmS~eeAm~ 98 (119)
T 3flv_A 20 FQSMHETRFEAAVKVIQSLPKNGS-FQPTNEMMLKFYSFYKQATEGPCKLSRPGFWDPIGRYKWDAWSSLGDMTKEEAMI 98 (119)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHSS-CCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTCHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHhCcccCC-CCCCHHHHHHHHHHHHHHhcCCCCCCCCCccCHHHHHHHHHHHHccCCCHHHHHH
Confidence 577999999999999999997553 4689999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccCcc
Q 014491 391 QYVTILSRSIPGCI 404 (423)
Q Consensus 391 KYIELVEELlP~W~ 404 (423)
+||++++++++.+.
T Consensus 99 ~YI~~v~~l~~~~~ 112 (119)
T 3flv_A 99 AYVEEMKKIIETMP 112 (119)
T ss_dssp HHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHhhCC
Confidence 99999999998864
No 11
>1mix_A Talin; focal adhesion, integrin binding, FERM domain, cytoskeleton, structural protein; 1.75A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 PDB: 1miz_B 1mk7_B 1mk9_B 1y19_B 3g9w_A 2hrj_A 2g35_A* 2k00_A 2h7d_A* 2h7e_A* 2kgx_B
Probab=98.17 E-value=7.4e-06 Score=70.75 Aligned_cols=84 Identities=25% Similarity=0.271 Sum_probs=65.0
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCChhhHHHHHHhhhccccCCCCCC--CCCCccHh------------hHHHHHHHHhc
Q 014491 315 LERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREP--QPMALKVS------------ARANWNAWKQL 380 (423)
Q Consensus 315 LEErFkaAVefVKsLPk~G~isqpS~DdKLeLYALYKQATvGDCNtP--RPG~fD~v------------gRaKWnAWKAL 380 (423)
+.--|..+...+-. |. ...+.++.+.|.||..||..||++.. .|+.+++. .+.-+++|+++
T Consensus 18 ~~l~y~Q~~~dil~----g~-~~~~~~~a~~Laal~~qa~~Gd~~~~~~~~~~~~~~~~lP~~~~~~~~~~~i~~~~~~~ 92 (206)
T 1mix_A 18 LNLLYVQARDDILN----GS-HPVSFDKACEFAGYQCQIQFGPHNEQKHKPGFLELKDFLPKEYIKQKGERKIFMAHKNC 92 (206)
T ss_dssp HHHHHHHHHHHHHT----TS-SCCCHHHHHHHHHHHHHHHHCSCCTTTSCTTCSCGGGTSCGGGSTTCCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHC----Cc-cccCHHHHHHHHHHhhhheecCCCcccccCCccchHhhCCHHHhhcccHHHHHHHHHHc
Confidence 44456666666644 22 25789999999999999999999864 46554433 67779999999
Q ss_pred CCCCHHHHHHHHHHHHHhhccCcc
Q 014491 381 GNMTPEIAMEQYVTILSRSIPGCI 404 (423)
Q Consensus 381 KGMSKEEAMrKYIELVEELlP~W~ 404 (423)
+|||+.+|+..|++++.++ |.|.
T Consensus 93 ~g~s~~~A~~~yL~~~~~l-~~yG 115 (206)
T 1mix_A 93 GNMSEIEAKVRYVKLARSL-KTYG 115 (206)
T ss_dssp TTCCHHHHHHHHHHHHHHS-TTTT
T ss_pred cCCCHHHHHHHHHHHHHhC-cccC
Confidence 9999999999999999754 5554
No 12
>4f7g_A Talin-1; alpha-helix bundle, integrin activation, cell adhesion; 2.05A {Mus musculus}
Probab=94.90 E-value=0.038 Score=48.99 Aligned_cols=85 Identities=22% Similarity=0.237 Sum_probs=58.7
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCCChhhHHHHHHhhhccccCCCCCC--CCCCcc-----------Hh-hHHHHHHHHh
Q 014491 314 ELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREP--QPMALK-----------VS-ARANWNAWKQ 379 (423)
Q Consensus 314 eLEErFkaAVefVKsLPk~G~isqpS~DdKLeLYALYKQATvGDCNtP--RPG~fD-----------~v-gRaKWnAWKA 379 (423)
.+.--|..+...+-. |. ...+.++.+.|=||--||..||.+.. .|+.+. -. .+.=..+|++
T Consensus 28 ~l~l~ylQ~~~dil~----G~-~~~~~e~a~~LAal~~Qae~Gd~~~~~~~~~~~~l~~~lP~~~~~~~~~~~I~~~h~~ 102 (222)
T 4f7g_A 28 QLNLLYVQARDDILN----GS-HPVSFDKACEFAGFQCQIQFGPHNEQKHKAGFLDLKDFLPKEYVKQKGERKIFQAHKN 102 (222)
T ss_dssp HHHHHHHHHHHHHHT----TS-SCCCHHHHHHHHHHHHHHHHCSCCTTTSCSSCSCGGGTSCGGGGGGCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhC----Cc-ccCCHHHHHHHHHHHHHHHHCCCCchhcccCccchhhccCHHHHhhhhHHHHHHHHHh
Confidence 344445555555532 22 25789999999999999999999863 232211 11 1222578999
Q ss_pred cCCCCHHHHHHHHHHHHHhhccCcc
Q 014491 380 LGNMTPEIAMEQYVTILSRSIPGCI 404 (423)
Q Consensus 380 LKGMSKEEAMrKYIELVEELlP~W~ 404 (423)
++|||+.+|+..|++++.++ |.|.
T Consensus 103 ~~g~s~~eA~~~yL~~~~~l-~~yG 126 (222)
T 4f7g_A 103 CGQMSEIEAKVRYVKLARSL-KTYG 126 (222)
T ss_dssp TTTCCHHHHHHHHHHHHHTS-TTTT
T ss_pred ccCCCHHHHHHHHHHHHhhc-cccC
Confidence 99999999999999999865 5543
No 13
>1ef1_A Moesin; membrane, FERM domain, tail domain, membrane protein; 1.90A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1sgh_A 1j19_A 2emt_A 2ems_A 2d10_A 2d11_A 2yvc_A 2d2q_A 2zpy_A 1gc7_A 1gc6_A 1ni2_A
Probab=94.75 E-value=0.057 Score=49.15 Aligned_cols=84 Identities=13% Similarity=0.071 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCChhhHHHHHHhhhccccCCCCCC--CCCCcc-----Hh---h-----HHHH-----H
Q 014491 316 ERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREP--QPMALK-----VS---A-----RANW-----N 375 (423)
Q Consensus 316 EErFkaAVefVKsLPk~G~isqpS~DdKLeLYALYKQATvGDCNtP--RPG~fD-----~v---g-----RaKW-----n 375 (423)
.--|.++..-|-. |. ...+.++.+.|=||--||..||++.. .|+.++ +. . ...| .
T Consensus 97 ~l~y~Q~~~dil~----g~-~~~~~e~a~~Laal~~q~~~Gd~~~~~~~~~~l~~~~~lP~~~~~~~~~~~~~~~~~I~~ 171 (294)
T 1ef1_A 97 RLFFLQVKEGILN----DD-IYCPPETAVLLASYAVQSKYGDFNKEVHKSGYLAGDKLLPQRVLEQHKLNKDQWEERIQV 171 (294)
T ss_dssp HHHHHHHHHHHHT----TS-SCCCHHHHHHHHHHHHHHHHCSCCTTTSCTTTTTTCCCSCHHHHHHBCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc----Cc-ccCCHHHHHHHHHHHHHHHhCCCCccccChhhccccccCCHHHHhhcCCCHHHHHHHHHH
Confidence 3345666655533 22 25778999999999999999999863 244321 10 1 2223 7
Q ss_pred HHHhcCCCCHHHHHHHHHHHHHhhccCccc
Q 014491 376 AWKQLGNMTPEIAMEQYVTILSRSIPGCIQ 405 (423)
Q Consensus 376 AWKALKGMSKEEAMrKYIELVEELlP~W~a 405 (423)
+|++++|||+.+|+..|++++.+ +|.|..
T Consensus 172 ~~~~~~g~s~~~A~~~yL~~~~~-lp~yG~ 200 (294)
T 1ef1_A 172 WHEEHRGMLREDAVLEYLKIAQD-LEMYGV 200 (294)
T ss_dssp HHHHTTTCCHHHHHHHHHHHHTT-STTTTC
T ss_pred HHHHccCCCHHHHHHHHHHHHcc-cCccCc
Confidence 89999999999999999999985 566643
No 14
>3qij_A Protein 4.1; cytoskeleton, structural genomics, structural genomics conso SGC; 1.80A {Homo sapiens} PDB: 1gg3_A 3bin_A 2he7_A 2rq1_A
Probab=94.60 E-value=0.074 Score=49.51 Aligned_cols=80 Identities=13% Similarity=-0.024 Sum_probs=56.5
Q ss_pred HHHHHHHHhcccCCCCCCCCChhhHHHHHHhhhccccCCCCCC--CCCCc----------cHhhHHHHHHHHhcCCCCHH
Q 014491 319 FGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREP--QPMAL----------KVSARANWNAWKQLGNMTPE 386 (423)
Q Consensus 319 FkaAVefVKsLPk~G~isqpS~DdKLeLYALYKQATvGDCNtP--RPG~f----------D~vgRaKWnAWKALKGMSKE 386 (423)
|.++..-|-. |. ...+.++.+.|=||--||..||++.. .|+.+ .-..+.=..+|++++|||+.
T Consensus 114 ylQ~~~dil~----G~-~~c~~e~a~~LAAl~~Qae~Gd~~~~~~~~~yl~~~~~~P~~~~~~~~~I~~~h~~~~g~s~~ 188 (296)
T 3qij_A 114 CLQLRQDIVA----GR-LPCSFATLALLGSYTIQSELGDYDPELHGVDYVSDFKLAPNQTKELEEKVMELHKSYRSMTPA 188 (296)
T ss_dssp HHHHHHHHHH----TS-SCCCHHHHHHHHHHHHHHHHCSCCHHHHTTCCCTTSCCSSSCCHHHHHHHHHHHHTCCSCCHH
T ss_pred HHHHHHHHHc----CC-CCCCHHHHHHHHHHHHHHhcCCCCccccchhhCcHhhcCCcCHHHHHHHHHHHHHHccCCCHH
Confidence 4555555532 22 24678999999999999999998742 22222 11122234789999999999
Q ss_pred HHHHHHHHHHHhhccCcc
Q 014491 387 IAMEQYVTILSRSIPGCI 404 (423)
Q Consensus 387 EAMrKYIELVEELlP~W~ 404 (423)
+|+..|++++.+ +|.|.
T Consensus 189 eA~~~yL~~a~~-l~~yG 205 (296)
T 3qij_A 189 QADLEFLENAKK-LSMYG 205 (296)
T ss_dssp HHHHHHHHHHTT-STTTT
T ss_pred HHHHHHHHHHhc-ccccC
Confidence 999999999987 56654
No 15
>1h4r_A Merlin; FERM, neurofibromatosis, NF2, structural protein, cytoskeleton, anti-oncogene; 1.8A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1isn_A 3u8z_A
Probab=94.53 E-value=0.064 Score=49.52 Aligned_cols=81 Identities=10% Similarity=-0.022 Sum_probs=57.1
Q ss_pred HHHHHHHHHhcccCCCCCCCCChhhHHHHHHhhhccccCCCCCC--CCCCccH------------------hhHHHHHHH
Q 014491 318 LFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREP--QPMALKV------------------SARANWNAW 377 (423)
Q Consensus 318 rFkaAVefVKsLPk~G~isqpS~DdKLeLYALYKQATvGDCNtP--RPG~fD~------------------vgRaKWnAW 377 (423)
-|.++...|-. |. ...+.++.+.|=||--||..||++.. .|+.++. ..+.=...|
T Consensus 119 ~y~Q~~~dil~----g~-~~~~~e~a~~Laal~~Qa~~Gd~~~~~~~~~~~~~~~~lP~~~~~~~~~~~~~~~~~I~~~~ 193 (314)
T 1h4r_A 119 FFLQVKKQILD----EK-IYCPPEASVLLASYAVQAKYGDYDPSVHKRGFLAQEELLPKRVINLYQMTPEMWEERITAWY 193 (314)
T ss_dssp HHHHHHHHHHT----TS-SCCCHHHHHHHHHHHHHHHHCSCCTTTSCTTTTTTCCCSCHHHHTTSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhC----CC-ccCCHHHHHHHHHHHHHHHHCCCCccccchhhcchhhcCCHHHHhhccCCHHHHHHHHHHHH
Confidence 44555555532 22 25789999999999999999999763 3433210 011123789
Q ss_pred HhcCCCCHHHHHHHHHHHHHhhccCcc
Q 014491 378 KQLGNMTPEIAMEQYVTILSRSIPGCI 404 (423)
Q Consensus 378 KALKGMSKEEAMrKYIELVEELlP~W~ 404 (423)
+++.|||+.+|+..|++++.+ +|.|.
T Consensus 194 ~~~~g~s~~eA~~~yL~~~~~-lp~yG 219 (314)
T 1h4r_A 194 AEHRGRARDEAEMEYLKIAQD-LEMYG 219 (314)
T ss_dssp HTTTTCCHHHHHHHHHHHHTT-STTTT
T ss_pred HHcCCCCHHHHHHHHHHHHhc-cCccC
Confidence 999999999999999999976 46654
No 16
>3ivf_A Talin-1; FERM domain, cell membrane, cell projection, cytoskeleton, M phosphoprotein, cell adhesion, structural protein; 1.94A {Mus musculus} PDB: 2kma_A 2kc1_A
Probab=93.48 E-value=0.18 Score=47.86 Aligned_cols=83 Identities=22% Similarity=0.253 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCChhhHHHHHHhhhccccCCCCCCC--CCCccH-----------h-hHHHHHHHHhcC
Q 014491 316 ERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQ--PMALKV-----------S-ARANWNAWKQLG 381 (423)
Q Consensus 316 EErFkaAVefVKsLPk~G~isqpS~DdKLeLYALYKQATvGDCNtPR--PG~fD~-----------v-gRaKWnAWKALK 381 (423)
.--|.++..-+-. |. ...+.++.+.|=||.-||..||++... |+.+++ . .+.=..+|++++
T Consensus 184 ~l~y~Q~~~dil~----G~-~~c~~e~a~~LAAl~~qae~Gd~~~~~~~~~~~~l~~~lP~~~~~~~~e~~I~~~~~~~~ 258 (371)
T 3ivf_A 184 NLLYVQARDDILN----GS-HPVSFDKACEFAGFQCQIQFGPHNEQKHKAGFLDLKDFLPKEYVKQKGERKIFQAHKNCG 258 (371)
T ss_dssp HHHHHHHHHHHHT----SS-SCCCHHHHHHHHHHHHHHHHCSCCTTTSCTTCSCGGGTSCGGGTTSCHHHHHHHHHHHTT
T ss_pred HHHHHHhhHHHhC----ce-eecCHHHHHHHHHHHHHHHhCCCChhhcccchhcccccCCHHHhCchHHHHHHHHHHHcc
Confidence 3345566655533 22 257789999999999999999998632 322110 1 122247899999
Q ss_pred CCCHHHHHHHHHHHHHhhccCcc
Q 014491 382 NMTPEIAMEQYVTILSRSIPGCI 404 (423)
Q Consensus 382 GMSKEEAMrKYIELVEELlP~W~ 404 (423)
|||+.+|+..|++++.+ +|.|.
T Consensus 259 g~s~~eA~~~yL~~~~~-l~~yG 280 (371)
T 3ivf_A 259 QMSEIEAKVRYVKLARS-LKTYG 280 (371)
T ss_dssp TCCHHHHHHHHHHHHHH-STTTT
T ss_pred CCCHHHHHHHHHHHHhc-ccccC
Confidence 99999999999999975 45553
No 17
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=92.22 E-value=0.24 Score=51.00 Aligned_cols=82 Identities=18% Similarity=0.198 Sum_probs=58.2
Q ss_pred HHHHHHHHHhcccCCCCCCCCChhhHHHHHHhhhccccCCCCCC--CCCCcc-----Hh---h-----HHHH-----HHH
Q 014491 318 LFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREP--QPMALK-----VS---A-----RANW-----NAW 377 (423)
Q Consensus 318 rFkaAVefVKsLPk~G~isqpS~DdKLeLYALYKQATvGDCNtP--RPG~fD-----~v---g-----RaKW-----nAW 377 (423)
-|..+..-|-. |. ...+.++.+.|=||--||..||++.. .|++++ +. . ...| ..|
T Consensus 102 lYlQvk~dIl~----G~-l~c~~e~a~~LAAL~lQae~GDy~~~~~~~~yl~~~~~lP~~vl~~~~~s~e~~~~~I~~~h 176 (575)
T 2i1j_A 102 FYLQVKNAILS----DE-IYCPPETSVLLASYAVQARHGDHNPAVHGPGFLANDRLLPQRVTDQHKMSREEWEQSITNWW 176 (575)
T ss_dssp HHHHHHHHHHT----TS-SCCCHHHHHHHHHHHHHHHHCSCCTTTCCTTTTTTCCCSCHHHHHTBCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhC----CC-CCCCHHHHHHHHHHHHHHHhcCCChhhcccccccccccCCHHHHhhcCCCHHHHHHHHHHHH
Confidence 45555555532 22 25778999999999999999999863 344431 11 0 2234 689
Q ss_pred HhcCCCCHHHHHHHHHHHHHhhccCccc
Q 014491 378 KQLGNMTPEIAMEQYVTILSRSIPGCIQ 405 (423)
Q Consensus 378 KALKGMSKEEAMrKYIELVEELlP~W~a 405 (423)
+++.|||+.+|+..|++++.+ +|.|..
T Consensus 177 k~l~G~s~~eA~~~yL~~a~~-lp~YG~ 203 (575)
T 2i1j_A 177 QEHRGMLREDAMMEYLKIAQD-LEMYGV 203 (575)
T ss_dssp GGGTTCCHHHHHHHHHHHHTT-STTTTC
T ss_pred HHccCCCHHHHHHHHHHHHHh-ccccCC
Confidence 999999999999999999985 476654
No 18
>3au4_A Myosin-X; protein-protein complex, motor protein cargo transportation, protein-apoptosis complex; 1.90A {Homo sapiens} PDB: 3au5_A 3pzd_A
Probab=90.61 E-value=0.93 Score=45.35 Aligned_cols=85 Identities=20% Similarity=0.254 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCChhhHHHHHHhhhccccCCCCCCC--CCCcc------Hhh----------------
Q 014491 315 LERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQ--PMALK------VSA---------------- 370 (423)
Q Consensus 315 LEErFkaAVefVKsLPk~G~isqpS~DdKLeLYALYKQATvGDCNtPR--PG~fD------~vg---------------- 370 (423)
+.--|..+..-+-. |. ...+.++.+.|=||.-|+..||++... +.+-+ +..
T Consensus 321 ~~lly~Q~~~dil~----G~-~~~~~e~a~~LAAl~lQ~~~GD~~~~~~~~~l~~~lP~~~l~~~~~~~~k~~s~~~~~l 395 (555)
T 3au4_A 321 FAFMFEQAHEAVIH----GH-HPAPEENLQVLAALRLQYLQGDYTLHAAIPPLEEVYSLQRLKARISQSTKTFSFRTGSV 395 (555)
T ss_dssp HHHHHHHHHHHHHT----TC-SCCCHHHHHHHHHHHHHHHHCSCCTTCCCCCGGGTSCCHHHHHHHHHTTCCEECCTTSC
T ss_pred HHhhHHHHHHHHHC----CC-CCCCHHHHHHHHHHHHHHHcCCCccccchhhhhhhCCHHHhhhhhcccccccccccccc
Confidence 44456777766643 22 256799999999999999999987632 11100 000
Q ss_pred ----------HHH-------------HHHHHhcCCCCHHHHHHHHHHHHHhhccCccc
Q 014491 371 ----------RAN-------------WNAWKQLGNMTPEIAMEQYVTILSRSIPGCIQ 405 (423)
Q Consensus 371 ----------RaK-------------WnAWKALKGMSKEEAMrKYIELVEELlP~W~a 405 (423)
... ...|++++|||+.+|+..|++++.++ |.|..
T Consensus 396 ~~~~~~~~~~~~~W~~~~~~~~~~~I~~~~~~~~g~s~~eA~~~yL~~~~~l-p~yG~ 452 (555)
T 3au4_A 396 VRQKVEEEQMLDMWIKEEVSSARASIIDKWRKFQGMNQEQAMAKYMALIKEW-PGYGS 452 (555)
T ss_dssp CEECCCCHHHHHHHTHHHHHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHTTS-TTTTC
T ss_pred ccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhC-CCcCc
Confidence 011 36789999999999999999999866 66654
No 19
>2al6_A Focal adhesion kinase 1; transferase; 2.35A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 2j0m_A* 2aeh_A
Probab=86.70 E-value=0.98 Score=43.35 Aligned_cols=85 Identities=13% Similarity=0.122 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCChhhHHHHHHhhhccccCCCCCCCCC----------------Cc--cH--------
Q 014491 315 LERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPM----------------AL--KV-------- 368 (423)
Q Consensus 315 LEErFkaAVefVKsLPk~G~isqpS~DdKLeLYALYKQATvGDCNtPRPG----------------~f--D~-------- 368 (423)
+.--|.++..-+-. |.+...+.++-+.|-||=-|+..||++...+. ++ ++
T Consensus 114 ~~~~y~Q~r~Dil~----g~~~~~~~e~al~LAaL~~q~~~gD~~~~~~~~k~~~~~l~k~~~l~~flP~~~~~~~~~~~ 189 (375)
T 2al6_A 114 LNFFYQQVKNDYML----EIADQVDQEIALKLGCLEIRRSYGEMRGNALEKKSNYEVLEKDVGLRRFFPKSLLDSVKAKT 189 (375)
T ss_dssp HHHHHHHHHHHHHH----HTTTTSCHHHHHHHHHHHHHHHTTTSCTTGGGSHHHHHHHHHTTCGGGTSCHHHHHSSCHHH
T ss_pred HHHHHHHHHHHHHc----CCCccCCHHHHHHHHHHHHHHHhhhccchhhcccCCHHHhhhcccHHHhCCHHHHHHhChHH
Confidence 44456666554422 11124679999999999999999998632110 00 01
Q ss_pred hhHHHHHHHHhcCCCCHHHHHHHHHHHHHhhccCcc
Q 014491 369 SARANWNAWKQLGNMTPEIAMEQYVTILSRSIPGCI 404 (423)
Q Consensus 369 vgRaKWnAWKALKGMSKEEAMrKYIELVEELlP~W~ 404 (423)
..+.=...|+++.||++++||.+|++++.+ +|.|.
T Consensus 190 ~~k~I~~~~k~~~g~s~~eAk~~yL~~~~~-l~~yG 224 (375)
T 2al6_A 190 LRKLIQQTFRQFANLNREESILKFFEILSP-VYRFD 224 (375)
T ss_dssp HHHHHHHHHHTTTTCCHHHHHHHHHHHHTT-TCCCS
T ss_pred HHHHHHHHHHHhhCCCHHHHHHHHHHHHhh-cccCC
Confidence 111114788999999999999999999988 56554
No 20
>4dxa_B KREV interaction trapped protein 1; GTPase, FERM, protein-protein interaction, GTP binding, CYTO protein binding; HET: GSP; 1.95A {Homo sapiens} PDB: 3u7d_A
Probab=85.12 E-value=0.71 Score=43.11 Aligned_cols=81 Identities=16% Similarity=0.091 Sum_probs=54.1
Q ss_pred HHHHHHHHHhcccCCCCCCCCChhhHHHHHHhhhccccCCCCC--CCCCCcc---H---------------hhHHHHHHH
Q 014491 318 LFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCRE--PQPMALK---V---------------SARANWNAW 377 (423)
Q Consensus 318 rFkaAVefVKsLPk~G~isqpS~DdKLeLYALYKQATvGDCNt--PRPG~fD---~---------------vgRaKWnAW 377 (423)
-|..+..-|-. |. ...+.++.+.|=||--||..||.+. ..|+.++ + ....=..+|
T Consensus 117 ~y~Q~~~dil~----G~-~~c~~e~a~~LAAl~~q~e~Gd~~~~~~~~~~l~~~~l~~~lP~~~~~~~~~~~~~~I~~~h 191 (322)
T 4dxa_B 117 LFDEARYNLLK----GF-YTAPDAKLITLASLLLQIVYGNYESKKHKQGFLNEENLKSIVPVTKLKSKAPHWTNRILHEY 191 (322)
T ss_dssp HHHHHHHHHHH----TC-CCCCHHHHHHHHHHHHHHHHCSCCHHHHSSSCSCHHHHTTTSCTTTTTTTGGGSHHHHHHHH
T ss_pred HHHHHHHHHHC----Cc-ccCCHHHHHHHHHHHHHHHhCCCCcccccccccchhhhhhhCCHHHHhcCHHHHHHHHHHHH
Confidence 45666666533 22 2467899999999999999999864 2333321 0 112235799
Q ss_pred Hhc---CCCCHH--HHHHHHHHHHHhhccCcc
Q 014491 378 KQL---GNMTPE--IAMEQYVTILSRSIPGCI 404 (423)
Q Consensus 378 KAL---KGMSKE--EAMrKYIELVEELlP~W~ 404 (423)
+++ .|||++ +|+..|++++.+ +|.|.
T Consensus 192 ~~~~~~~g~s~~~a~a~~~yL~~~~~-lp~yG 222 (322)
T 4dxa_B 192 KNLSTSEGVSKEMHHLQRMFLQNCWE-IPTYG 222 (322)
T ss_dssp HHHHC--CCCCCHHHHHHHHHHHHHT-STTTT
T ss_pred HhcccccCCChhHHHHHHHHHHHHhc-CCCcC
Confidence 999 999975 569999999874 35543
No 21
>4eku_A Protein-tyrosine kinase 2-beta; proline-rich tyrosine kinase 2, FERM domain, transferase; 3.25A {Homo sapiens}
Probab=74.27 E-value=4.3 Score=39.87 Aligned_cols=89 Identities=12% Similarity=0.091 Sum_probs=59.7
Q ss_pred cchHHHHHHHHHHHH-hcccCCCCCCCCChhhHHHHHHhhhccccCCCCCCC----C---------C---Cc--cHhh--
Q 014491 312 RTELERLFGAAVAFV-GNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQ----P---------M---AL--KVSA-- 370 (423)
Q Consensus 312 sdeLEErFkaAVefV-KsLPk~G~isqpS~DdKLeLYALYKQATvGDCNtPR----P---------G---~f--D~vg-- 370 (423)
...++--|.++..-+ +..+ ..++.++-++|-+|-.|+-.||++... + + ++ ++..
T Consensus 131 ~~~~~ylY~Q~r~D~l~g~~-----~~~~~e~al~LAaL~~q~~~gd~~~~a~~~k~~~~~l~k~~~lk~flP~~l~~~i 205 (392)
T 4eku_A 131 RTTLLYFYQQLRNDYMQRYA-----SKVSEGMALQLGCLELRRFFKDMPHNALDKKSNFELLEKEVGLDLFFPKQMQENL 205 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHTT-----TTSCHHHHHHHHHHHHHHHTTTSCTTGGGSHHHHHHHHHHTCGGGTSCHHHHHHS
T ss_pred hHHHHHHHHHHHHHHHcCCC-----CCCCHHHHHHHHHHHHHHHhhhcchhhhccCCCHHHHhhhccHHHhcCHHHHhhc
Confidence 334555676666554 3321 257899999999999999999886421 0 0 01 1111
Q ss_pred ------HHHHHHHHhcCCCCHHHHHHHHHHHHHhhccCcccc
Q 014491 371 ------RANWNAWKQLGNMTPEIAMEQYVTILSRSIPGCIQD 406 (423)
Q Consensus 371 ------RaKWnAWKALKGMSKEEAMrKYIELVEELlP~W~a~ 406 (423)
+.=...++++.||+..+||.+|+..+.++ |.|...
T Consensus 206 k~k~~rk~I~~~~kk~~~ls~~eakl~YL~~l~~L-p~yG~e 246 (392)
T 4eku_A 206 KPKQFRKMIQQTFQQYASLREEECVMKFFNTLAGF-ANIDQE 246 (392)
T ss_dssp CHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTS-SCCSCE
T ss_pred CHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhh-hccCcE
Confidence 11134677889999999999999999987 887644
No 22
>3pvl_A Myosin VIIA isoform 1; protein complex, novel folding, protein cargo binding, cargo proteins, motor protein-protein transport complex; 2.80A {Mus musculus}
Probab=74.04 E-value=7.3 Score=40.75 Aligned_cols=83 Identities=14% Similarity=0.089 Sum_probs=54.7
Q ss_pred HHHHHHHHHHhcccCCCCCCCCChh-hHHHHHHhhhccccCCCCCCC----------CCC-ccH-hhHHHH-----HHHH
Q 014491 317 RLFGAAVAFVGNKCNAGRISSIGSD-VKMQLYGLHKIATVGPCREPQ----------PMA-LKV-SARANW-----NAWK 378 (423)
Q Consensus 317 ErFkaAVefVKsLPk~G~isqpS~D-dKLeLYALYKQATvGDCNtPR----------PG~-fD~-vgRaKW-----nAWK 378 (423)
--|..+..-|-. |. ...+.+ +...|=||.-||..||++.+. |.. ... .....| .+|+
T Consensus 372 LlYlQ~k~dIl~----Gr-lpc~~E~~a~~LAAl~~Qae~Gd~~~~~~~~~~L~~~lP~~~l~~~~~~~~w~~~I~~~hk 446 (655)
T 3pvl_A 372 LIYQQVVRGVKF----GE-YRCEKEDDLAELASQQYFVDYGSEMILERLLSLVPTYIPDREITPLKNLEKWAQLAIAAHK 446 (655)
T ss_dssp HHHHHHHHHHHH----TS-SCCSSHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHSCGGGCCSSSCHHHHHHHHHHHHH
T ss_pred HHHHHHhccccc----Cc-cCCChHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHhCCHHHHhccCCHHHHHHHHHHHHH
Confidence 345666655533 22 134444 899999999999999986421 211 111 122333 6788
Q ss_pred hc----CCCCHHHHHHHHHHHHHhhccCcc
Q 014491 379 QL----GNMTPEIAMEQYVTILSRSIPGCI 404 (423)
Q Consensus 379 AL----KGMSKEEAMrKYIELVEELlP~W~ 404 (423)
++ +|||+.+|+..|++++.+-+|-|.
T Consensus 447 k~~~~~~g~s~~eAk~~yL~~a~~~lp~YG 476 (655)
T 3pvl_A 447 KGIYAQRRTDSQKVKEDVVNYARFKWPLLF 476 (655)
T ss_dssp HHHHTTCSSCHHHHHHHHHHHHHHHCTTTS
T ss_pred hhhccccCCCHHHHHHHHHHHHHHhccccC
Confidence 88 999999999999999965566664
No 23
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=31.04 E-value=42 Score=34.10 Aligned_cols=62 Identities=21% Similarity=0.342 Sum_probs=46.2
Q ss_pred CCChhhHHHHHHhhhccccCCCCCCC--------------------CCCc----c--HhhHHHHHHHHhcCCCCHHHHHH
Q 014491 337 SIGSDVKMQLYGLHKIATVGPCREPQ--------------------PMAL----K--VSARANWNAWKQLGNMTPEIAME 390 (423)
Q Consensus 337 qpS~DdKLeLYALYKQATvGDCNtPR--------------------PG~f----D--~vgRaKWnAWKALKGMSKEEAMr 390 (423)
..+.++-|.|-+|-.|+..||++..+ |..+ . -..+.=.+.|+++.++++++||-
T Consensus 132 ~~~~~~al~La~l~~~~~~~d~~~~a~~~~~~~~~~~k~~~~~~fiP~~~~~~~~~~~~~k~i~~~~k~~~~~~~~~~~l 211 (656)
T 2j0j_A 132 QVDQEIALKLGCLEIRRSYGEMRGNALEKKSNYEVLEKDVGLRRFFPKSLLDSVKAKTLRKLIQQTFRQFANLNREESIL 211 (656)
T ss_dssp GSCHHHHHHHHHHHHHHHTTTSCTTGGGSHHHHHHHHHTTTGGGTSCHHHHHHSCHHHHHHHHHHHHGGGTTCCHHHHHH
T ss_pred cccHhHHHHHHHHHHHHHhhhccchhhhcCCCHHHHHhhccHHHhCCHHHHHHhhhhHHHHHHHHHHHHHhcCCHHHHHH
Confidence 36799999999999999999995431 2100 0 01111168889999999999999
Q ss_pred HHHHHHHh
Q 014491 391 QYVTILSR 398 (423)
Q Consensus 391 KYIELVEE 398 (423)
+|++.+..
T Consensus 212 k~l~~l~~ 219 (656)
T 2j0j_A 212 KFFEILSP 219 (656)
T ss_dssp HHHHHHGG
T ss_pred HHHHHhcc
Confidence 99988887
Done!