Query 014492
Match_columns 423
No_of_seqs 319 out of 2797
Neff 9.3
Searched_HMMs 46136
Date Fri Mar 29 05:40:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014492.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014492hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03026 histidinol-phosphate 100.0 1E-57 2.2E-62 446.8 42.6 365 58-422 15-379 (380)
2 COG0079 HisC Histidinol-phosph 100.0 2.6E-57 5.6E-62 434.2 37.9 342 68-422 3-351 (356)
3 PRK01533 histidinol-phosphate 100.0 2.3E-53 4.9E-58 413.6 38.0 341 69-422 5-352 (366)
4 COG0436 Aspartate/tyrosine/aro 100.0 5E-53 1.1E-57 411.6 35.7 325 95-422 28-385 (393)
5 PRK01688 histidinol-phosphate 100.0 6.5E-52 1.4E-56 401.9 37.3 337 65-420 7-351 (351)
6 PRK03158 histidinol-phosphate 100.0 1.6E-51 3.5E-56 401.1 38.8 347 69-422 5-358 (359)
7 PRK14809 histidinol-phosphate 100.0 6.4E-51 1.4E-55 396.4 40.0 341 71-420 6-352 (357)
8 PRK05166 histidinol-phosphate 100.0 4.4E-50 9.4E-55 392.3 39.4 350 67-422 10-368 (371)
9 PRK07392 threonine-phosphate d 100.0 9.8E-50 2.1E-54 388.4 39.8 335 83-422 10-356 (360)
10 PRK04870 histidinol-phosphate 100.0 7.9E-50 1.7E-54 388.7 38.3 323 95-422 26-355 (356)
11 PRK14807 histidinol-phosphate 100.0 2E-49 4.4E-54 384.8 40.1 322 96-422 23-349 (351)
12 PRK02610 histidinol-phosphate 100.0 1E-49 2.3E-54 389.9 37.8 318 96-420 29-366 (374)
13 PRK04781 histidinol-phosphate 100.0 1.6E-49 3.5E-54 386.9 38.9 318 96-422 32-360 (364)
14 PRK04635 histidinol-phosphate 100.0 1.2E-49 2.6E-54 386.8 37.1 316 95-421 31-351 (354)
15 PRK00950 histidinol-phosphate 100.0 3.1E-49 6.6E-54 385.5 39.9 350 66-422 5-359 (361)
16 PRK08153 histidinol-phosphate 100.0 2E-49 4.4E-54 387.0 38.0 325 96-422 33-362 (369)
17 PRK06358 threonine-phosphate d 100.0 2.9E-49 6.3E-54 383.8 38.8 334 82-422 6-352 (354)
18 PRK02731 histidinol-phosphate 100.0 3.5E-49 7.5E-54 385.9 39.3 351 67-422 6-363 (367)
19 PRK09105 putative aminotransfe 100.0 2.4E-49 5.3E-54 386.0 36.8 322 94-422 42-367 (370)
20 PRK08056 threonine-phosphate d 100.0 5.9E-49 1.3E-53 382.2 38.0 337 80-422 5-352 (356)
21 PRK05387 histidinol-phosphate 100.0 5.4E-49 1.2E-53 382.6 36.9 320 95-422 24-350 (353)
22 PRK07681 aspartate aminotransf 100.0 7.2E-49 1.5E-53 387.4 36.5 330 90-422 27-382 (399)
23 KOG0633 Histidinol phosphate a 100.0 1.4E-49 2.9E-54 344.7 27.2 352 62-422 11-374 (375)
24 PRK14808 histidinol-phosphate 100.0 4.8E-48 1E-52 372.1 36.4 312 94-423 18-335 (335)
25 PRK07366 succinyldiaminopimela 100.0 3.6E-48 7.8E-53 381.3 35.9 329 91-422 26-384 (388)
26 PRK06290 aspartate aminotransf 100.0 9.7E-48 2.1E-52 379.1 38.3 326 93-421 42-401 (410)
27 PRK03967 histidinol-phosphate 100.0 8.7E-48 1.9E-52 371.0 36.6 311 95-422 18-331 (337)
28 PRK03317 histidinol-phosphate 100.0 7.3E-48 1.6E-52 376.5 36.3 320 96-422 27-361 (368)
29 PRK09147 succinyldiaminopimela 100.0 7.1E-48 1.5E-52 380.1 36.2 324 93-422 27-390 (396)
30 PRK06425 histidinol-phosphate 100.0 1.5E-47 3.3E-52 368.7 36.9 305 96-422 17-330 (332)
31 PRK08960 hypothetical protein; 100.0 6.7E-48 1.5E-52 379.1 34.8 328 92-422 29-381 (387)
32 PRK06348 aspartate aminotransf 100.0 5.5E-47 1.2E-51 372.1 38.6 326 95-423 29-380 (384)
33 PRK08068 transaminase; Reviewe 100.0 1.9E-47 4.2E-52 376.1 35.1 327 93-422 30-383 (389)
34 PRK09276 LL-diaminopimelate am 100.0 4.3E-47 9.4E-52 373.3 37.1 334 86-423 22-383 (385)
35 PRK06959 putative threonine-ph 100.0 3.7E-47 8E-52 366.4 35.2 317 79-422 8-330 (339)
36 PLN02187 rooty/superroot1 100.0 5.5E-47 1.2E-51 378.5 37.4 327 93-422 64-432 (462)
37 PRK06207 aspartate aminotransf 100.0 7.3E-47 1.6E-51 373.2 37.1 326 94-422 38-396 (405)
38 PLN00175 aminotransferase fami 100.0 2.4E-46 5.3E-51 370.0 39.6 325 95-422 54-407 (413)
39 TIGR03538 DapC_gpp succinyldia 100.0 6.9E-47 1.5E-51 372.7 35.4 324 93-422 26-389 (393)
40 PLN00143 tyrosine/nicotianamin 100.0 1.1E-46 2.4E-51 372.3 36.1 327 93-422 30-398 (409)
41 PRK07324 transaminase; Validat 100.0 6.3E-47 1.4E-51 369.8 33.6 331 89-423 20-365 (373)
42 TIGR01141 hisC histidinol-phos 100.0 2.7E-46 5.9E-51 362.6 37.7 322 95-419 19-345 (346)
43 PRK03321 putative aminotransfe 100.0 1.9E-46 4.1E-51 364.5 35.6 320 95-422 22-348 (352)
44 PRK13355 bifunctional HTH-doma 100.0 4E-46 8.7E-51 378.4 39.2 351 67-422 119-508 (517)
45 TIGR03540 DapC_direct LL-diami 100.0 2.9E-46 6.4E-51 367.2 36.4 328 92-423 26-381 (383)
46 PRK05942 aspartate aminotransf 100.0 3.1E-46 6.8E-51 368.0 36.5 331 89-422 29-386 (394)
47 TIGR03537 DapC succinyldiamino 100.0 2.5E-46 5.3E-51 363.1 35.2 324 97-423 2-348 (350)
48 PRK07908 hypothetical protein; 100.0 3.6E-46 7.9E-51 361.9 36.0 316 94-422 21-344 (349)
49 PRK07337 aminotransferase; Val 100.0 3.5E-46 7.6E-51 367.2 36.0 331 89-422 24-383 (388)
50 PLN00145 tyrosine/nicotianamin 100.0 6.4E-46 1.4E-50 368.3 37.3 326 94-422 51-418 (430)
51 PRK09148 aminotransferase; Val 100.0 5.5E-46 1.2E-50 367.2 35.9 328 92-422 27-384 (405)
52 PLN02656 tyrosine transaminase 100.0 6.6E-46 1.4E-50 367.0 36.4 328 93-423 29-398 (409)
53 PTZ00433 tyrosine aminotransfe 100.0 7E-46 1.5E-50 367.4 36.3 327 93-422 31-402 (412)
54 PRK05839 hypothetical protein; 100.0 4.6E-46 1E-50 364.0 34.0 325 84-422 12-368 (374)
55 TIGR01264 tyr_amTase_E tyrosin 100.0 1.3E-45 2.9E-50 364.5 36.9 327 93-422 29-393 (401)
56 PRK12414 putative aminotransfe 100.0 1.1E-45 2.4E-50 362.7 35.5 326 95-423 29-382 (384)
57 PLN02450 1-aminocyclopropane-1 100.0 2.6E-46 5.6E-51 374.2 31.5 327 94-422 37-424 (468)
58 PRK15481 transcriptional regul 100.0 3.1E-46 6.7E-51 372.2 31.7 321 95-422 85-425 (431)
59 PRK08636 aspartate aminotransf 100.0 2.3E-45 5E-50 362.8 37.2 335 86-422 24-394 (403)
60 PRK07682 hypothetical protein; 100.0 1.4E-45 3.1E-50 361.7 34.9 325 95-422 20-370 (378)
61 PLN02376 1-aminocyclopropane-1 100.0 8.3E-46 1.8E-50 371.8 31.1 328 94-422 45-432 (496)
62 PRK06108 aspartate aminotransf 100.0 5.3E-45 1.1E-49 358.4 36.2 325 95-422 24-376 (382)
63 PRK05957 aspartate aminotransf 100.0 6.8E-45 1.5E-49 357.8 36.7 326 95-422 27-379 (389)
64 PRK07550 hypothetical protein; 100.0 6.2E-45 1.3E-49 358.1 35.9 333 88-422 22-381 (386)
65 PRK05664 threonine-phosphate d 100.0 5.4E-45 1.2E-49 350.6 34.5 312 83-422 8-325 (330)
66 PRK07590 L,L-diaminopimelate a 100.0 4.6E-45 1E-49 361.3 33.9 318 94-422 33-405 (409)
67 TIGR01140 L_thr_O3P_dcar L-thr 100.0 1.6E-44 3.5E-49 347.4 36.2 322 80-419 2-329 (330)
68 PRK08361 aspartate aminotransf 100.0 2.3E-44 5.1E-49 354.5 36.6 325 95-422 33-384 (391)
69 PRK08912 hypothetical protein; 100.0 1.5E-44 3.2E-49 355.6 34.9 325 95-422 26-380 (387)
70 PRK07865 N-succinyldiaminopime 100.0 1.9E-44 4.2E-49 351.8 35.1 324 85-423 17-363 (364)
71 PRK09082 methionine aminotrans 100.0 2.9E-44 6.2E-49 353.1 36.0 326 95-423 30-384 (386)
72 KOG0257 Kynurenine aminotransf 100.0 1.7E-45 3.6E-50 341.4 25.0 321 100-423 36-414 (420)
73 PRK06855 aminotransferase; Val 100.0 3.2E-44 7E-49 357.0 36.1 333 88-422 25-423 (433)
74 PTZ00377 alanine aminotransfer 100.0 1.3E-44 2.9E-49 364.4 33.2 328 93-422 44-469 (481)
75 COG1168 MalY Bifunctional PLP- 100.0 2.1E-44 4.6E-49 330.9 31.5 331 89-422 17-380 (388)
76 PRK07309 aromatic amino acid a 100.0 9.7E-44 2.1E-48 349.8 38.2 326 95-422 30-382 (391)
77 TIGR03539 DapC_actino succinyl 100.0 2.7E-44 5.8E-49 349.7 33.7 326 83-423 9-357 (357)
78 PRK06107 aspartate aminotransf 100.0 1.1E-43 2.3E-48 350.8 37.5 327 93-422 31-394 (402)
79 PRK09265 aminotransferase AlaT 100.0 9.8E-44 2.1E-48 351.4 37.0 332 88-422 26-395 (404)
80 PRK07683 aminotransferase A; V 100.0 1.1E-43 2.3E-48 349.1 36.7 325 95-422 28-377 (387)
81 PRK08363 alanine aminotransfer 100.0 9.1E-44 2E-48 351.1 36.4 330 90-422 25-388 (398)
82 TIGR01265 tyr_nico_aTase tyros 100.0 1.2E-43 2.6E-48 350.5 36.5 327 93-422 29-395 (403)
83 TIGR03542 DAPAT_plant LL-diami 100.0 2.4E-44 5.2E-49 355.4 31.4 320 94-423 32-399 (402)
84 PLN02607 1-aminocyclopropane-1 100.0 4.2E-44 9.1E-49 355.6 32.3 328 93-422 45-431 (447)
85 PRK07568 aspartate aminotransf 100.0 3.9E-43 8.5E-48 346.8 36.9 325 94-422 29-386 (397)
86 PRK05764 aspartate aminotransf 100.0 5.1E-43 1.1E-47 345.5 36.9 328 92-422 28-385 (393)
87 PRK08354 putative aminotransfe 100.0 5.3E-43 1.1E-47 334.1 34.7 298 93-422 6-309 (311)
88 PRK08175 aminotransferase; Val 100.0 7.9E-43 1.7E-47 343.9 35.8 327 93-422 27-383 (395)
89 PRK06225 aspartate aminotransf 100.0 1.2E-42 2.5E-47 341.2 36.5 324 95-422 28-370 (380)
90 COG1167 ARO8 Transcriptional r 100.0 7.6E-43 1.6E-47 347.5 35.2 325 95-422 89-449 (459)
91 PF00155 Aminotran_1_2: Aminot 100.0 1.2E-43 2.6E-48 346.3 25.2 325 96-422 2-363 (363)
92 PRK07777 aminotransferase; Val 100.0 4E-42 8.7E-47 338.2 36.0 325 95-422 24-380 (387)
93 KOG0259 Tyrosine aminotransfer 100.0 3.4E-42 7.3E-47 313.8 32.2 326 95-423 61-428 (447)
94 PRK09275 aspartate aminotransf 100.0 9.7E-43 2.1E-47 346.9 31.1 322 96-422 101-511 (527)
95 PRK06836 aspartate aminotransf 100.0 5.4E-42 1.2E-46 337.8 35.8 320 95-422 33-385 (394)
96 PLN02672 methionine S-methyltr 100.0 1.1E-41 2.4E-46 358.2 35.5 328 93-422 695-1074(1082)
97 PLN02231 alanine transaminase 100.0 4.5E-41 9.9E-46 339.3 36.4 324 96-422 130-521 (534)
98 PTZ00376 aspartate aminotransf 100.0 5.1E-41 1.1E-45 331.8 33.3 314 95-421 29-399 (404)
99 PLN02368 alanine transaminase 100.0 6.5E-42 1.4E-46 335.7 26.5 303 68-371 12-396 (407)
100 PRK09440 avtA valine--pyruvate 100.0 7.1E-41 1.5E-45 332.5 31.7 322 95-422 30-405 (416)
101 PRK09257 aromatic amino acid a 100.0 3.9E-40 8.5E-45 324.9 33.9 315 95-422 26-392 (396)
102 TIGR03801 asp_4_decarbox aspar 100.0 2.6E-40 5.5E-45 329.1 31.8 322 96-422 95-510 (521)
103 PLN02397 aspartate transaminas 100.0 9.8E-40 2.1E-44 323.7 32.7 314 94-422 47-415 (423)
104 PRK08637 hypothetical protein; 100.0 6.4E-39 1.4E-43 315.3 32.6 306 111-422 23-380 (388)
105 KOG0256 1-aminocyclopropane-1- 100.0 2E-38 4.3E-43 291.7 26.4 298 124-422 115-455 (471)
106 cd00609 AAT_like Aspartate ami 100.0 5.7E-34 1.2E-38 276.1 33.4 322 98-422 1-348 (350)
107 TIGR00858 bioF 8-amino-7-oxono 100.0 1.6E-32 3.6E-37 267.4 31.8 319 93-423 14-360 (360)
108 TIGR03576 pyridox_MJ0158 pyrid 100.0 1.5E-32 3.3E-37 264.3 30.9 293 106-421 31-343 (346)
109 PRK10874 cysteine sulfinate de 100.0 5.9E-32 1.3E-36 267.3 34.6 318 95-421 18-394 (401)
110 PRK10534 L-threonine aldolase; 100.0 6.5E-33 1.4E-37 267.5 23.8 304 97-421 1-329 (333)
111 TIGR03392 FeS_syn_CsdA cystein 100.0 2.1E-31 4.4E-36 263.2 34.6 318 96-422 16-392 (398)
112 KOG0634 Aromatic amino acid am 100.0 6E-32 1.3E-36 251.0 27.7 296 124-422 94-460 (472)
113 TIGR01822 2am3keto_CoA 2-amino 100.0 6.1E-31 1.3E-35 259.5 32.4 320 93-422 36-383 (393)
114 TIGR02539 SepCysS Sep-tRNA:Cys 100.0 8.5E-31 1.8E-35 256.0 30.8 280 131-422 53-365 (370)
115 cd06451 AGAT_like Alanine-glyo 100.0 2.5E-30 5.5E-35 251.7 33.5 312 105-421 6-353 (356)
116 TIGR01979 sufS cysteine desulf 100.0 2.7E-30 5.9E-35 255.7 31.7 320 94-422 16-398 (403)
117 PRK05958 8-amino-7-oxononanoat 100.0 4.8E-30 1E-34 252.4 32.8 318 93-421 37-383 (385)
118 PRK13392 5-aminolevulinate syn 100.0 1.7E-30 3.8E-35 257.4 29.8 317 95-422 46-394 (410)
119 PLN02721 threonine aldolase 100.0 3.6E-30 7.8E-35 250.3 30.6 311 96-421 6-348 (353)
120 PRK02948 cysteine desulfurase; 100.0 1E-30 2.2E-35 256.9 26.5 316 98-422 2-371 (381)
121 PRK13238 tnaA tryptophanase/L- 100.0 9.1E-30 2E-34 253.0 33.1 335 81-422 22-430 (460)
122 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 5.1E-30 1.1E-34 250.0 30.8 304 108-422 12-359 (361)
123 cd06502 TA_like Low-specificit 100.0 4.5E-30 9.8E-35 248.2 30.0 305 103-421 4-337 (338)
124 PRK09295 bifunctional cysteine 100.0 7.8E-30 1.7E-34 252.5 31.7 319 95-422 22-401 (406)
125 PRK06939 2-amino-3-ketobutyrat 100.0 1.1E-29 2.3E-34 251.0 31.2 320 93-422 40-387 (397)
126 TIGR01976 am_tr_V_VC1184 cyste 100.0 3.2E-29 6.9E-34 247.6 32.3 312 97-418 18-396 (397)
127 PLN02855 Bifunctional selenocy 100.0 2.1E-29 4.6E-34 250.7 30.2 319 95-422 31-415 (424)
128 cd06454 KBL_like KBL_like; thi 100.0 1.2E-28 2.6E-33 239.2 30.9 316 97-422 3-348 (349)
129 TIGR00707 argD acetylornithine 100.0 6.5E-29 1.4E-33 243.9 29.0 316 93-422 25-375 (379)
130 PRK07179 hypothetical protein; 100.0 3E-28 6.4E-33 241.2 33.9 317 93-421 52-394 (407)
131 PLN02822 serine palmitoyltrans 100.0 2.6E-28 5.6E-33 244.7 33.3 320 93-422 107-471 (481)
132 TIGR01825 gly_Cac_T_rel pyrido 100.0 2.5E-28 5.4E-33 240.3 31.7 320 92-422 30-375 (385)
133 cd06453 SufS_like Cysteine des 100.0 2.6E-28 5.6E-33 239.1 30.0 282 131-420 45-371 (373)
134 PLN02483 serine palmitoyltrans 100.0 3.9E-28 8.4E-33 243.9 31.0 319 94-422 99-460 (489)
135 PRK07049 methionine gamma-lyas 100.0 3.2E-28 7E-33 240.4 29.6 282 124-420 78-421 (427)
136 PRK09064 5-aminolevulinate syn 100.0 6E-28 1.3E-32 239.2 31.1 318 94-422 45-394 (407)
137 TIGR03301 PhnW-AepZ 2-aminoeth 100.0 1.1E-27 2.3E-32 233.1 30.6 308 105-421 6-353 (355)
138 TIGR01821 5aminolev_synth 5-am 100.0 1.5E-27 3.3E-32 235.9 31.9 317 95-422 45-393 (402)
139 PRK02627 acetylornithine amino 100.0 3.5E-28 7.5E-33 240.1 26.7 318 92-422 36-388 (396)
140 COG3977 Alanine-alpha-ketoisov 100.0 1.1E-27 2.4E-32 212.5 25.7 316 97-422 32-405 (417)
141 PRK09331 Sep-tRNA:Cys-tRNA syn 100.0 3.6E-27 7.8E-32 231.7 32.2 318 94-422 17-378 (387)
142 TIGR03403 nifS_epsilon cystein 100.0 7E-28 1.5E-32 236.7 27.2 314 99-421 2-371 (382)
143 PRK13479 2-aminoethylphosphona 100.0 2.4E-27 5.1E-32 231.9 30.8 311 104-422 11-360 (368)
144 PRK03244 argD acetylornithine 100.0 7.1E-28 1.5E-32 237.9 26.7 314 92-421 40-390 (398)
145 PLN02409 serine--glyoxylate am 100.0 4.8E-27 1E-31 231.7 32.2 312 104-420 15-364 (401)
146 PLN02242 methionine gamma-lyas 100.0 1.9E-27 4E-32 234.2 29.0 245 126-384 73-347 (418)
147 COG0520 csdA Selenocysteine ly 100.0 1.4E-26 3.1E-31 225.6 32.5 320 94-422 20-402 (405)
148 cd00378 SHMT Serine-glycine hy 100.0 5.5E-27 1.2E-31 232.1 30.0 316 97-421 21-381 (402)
149 TIGR01977 am_tr_V_EF2568 cyste 100.0 4.4E-27 9.4E-32 230.7 28.1 317 98-421 1-375 (376)
150 cd00610 OAT_like Acetyl ornith 100.0 1.8E-27 4E-32 236.3 25.4 324 92-422 33-409 (413)
151 TIGR03812 tyr_de_CO2_Arch tyro 100.0 2.3E-26 5E-31 225.3 31.8 282 131-422 61-373 (373)
152 COG1448 TyrB Aspartate/tyrosin 100.0 1.9E-26 4.2E-31 212.6 29.1 332 79-422 9-395 (396)
153 TIGR02326 transamin_PhnW 2-ami 100.0 1.7E-26 3.6E-31 225.4 30.5 308 106-421 11-358 (363)
154 cd00617 Tnase_like Tryptophana 100.0 2.5E-26 5.3E-31 225.5 30.6 319 93-422 9-405 (431)
155 PRK13393 5-aminolevulinate syn 100.0 4.6E-26 9.9E-31 225.5 31.7 317 95-422 45-393 (406)
156 TIGR03402 FeS_nifS cysteine de 100.0 1.7E-26 3.7E-31 226.7 27.8 314 99-421 2-368 (379)
157 cd00613 GDC-P Glycine cleavage 100.0 4.8E-26 1E-30 225.0 29.9 318 95-421 20-397 (398)
158 COG0156 BioF 7-keto-8-aminopel 100.0 8.8E-26 1.9E-30 216.0 29.0 317 94-421 38-386 (388)
159 PRK00451 glycine dehydrogenase 100.0 9.4E-26 2E-30 226.1 30.7 315 96-422 69-445 (447)
160 PRK06234 methionine gamma-lyas 100.0 1E-25 2.2E-30 221.5 29.9 279 124-419 59-391 (400)
161 PRK06460 hypothetical protein; 100.0 6E-26 1.3E-30 221.3 27.0 218 125-356 41-264 (376)
162 PRK13520 L-tyrosine decarboxyl 99.9 2E-25 4.4E-30 218.5 30.1 306 107-422 30-368 (371)
163 PRK00011 glyA serine hydroxyme 99.9 2E-25 4.3E-30 221.8 29.7 318 95-422 25-386 (416)
164 PRK01278 argD acetylornithine 99.9 1.7E-25 3.7E-30 220.3 28.7 317 92-422 28-382 (389)
165 TIGR02006 IscS cysteine desulf 99.9 3.6E-25 7.8E-30 218.8 28.5 314 98-422 5-374 (402)
166 TIGR01437 selA_rel uncharacter 99.9 8.9E-25 1.9E-29 212.4 28.4 296 109-422 25-362 (363)
167 PRK06767 methionine gamma-lyas 99.9 3.9E-25 8.5E-30 216.6 25.5 280 124-420 56-380 (386)
168 PRK08247 cystathionine gamma-s 99.9 7.4E-25 1.6E-29 213.3 26.7 230 124-371 47-288 (366)
169 TIGR02080 O_succ_thio_ly O-suc 99.9 9.6E-25 2.1E-29 213.0 26.5 300 98-420 26-376 (382)
170 PRK04073 rocD ornithine--oxo-a 99.9 1.5E-24 3.2E-29 213.9 28.2 312 92-421 37-393 (396)
171 cd06450 DOPA_deC_like DOPA dec 99.9 1.2E-24 2.6E-29 210.9 26.9 277 126-421 30-344 (345)
172 PRK08045 cystathionine gamma-s 99.9 2.4E-24 5.2E-29 210.4 28.6 245 124-384 47-319 (386)
173 PRK04260 acetylornithine amino 99.9 4.1E-24 9E-29 209.3 29.6 320 92-422 26-371 (375)
174 COG1104 NifS Cysteine sulfinat 99.9 2.2E-24 4.7E-29 203.0 25.0 316 97-421 2-370 (386)
175 PRK07504 O-succinylhomoserine 99.9 1.1E-24 2.3E-29 214.0 24.0 271 97-384 31-332 (398)
176 TIGR03235 DNA_S_dndA cysteine 99.9 1.2E-24 2.6E-29 211.5 23.6 293 108-410 9-342 (353)
177 TIGR01325 O_suc_HS_sulf O-succ 99.9 3.1E-24 6.7E-29 209.8 26.5 281 124-421 49-378 (380)
178 PRK08249 cystathionine gamma-s 99.9 3.7E-24 7.9E-29 209.9 26.6 216 125-356 60-283 (398)
179 PRK07505 hypothetical protein; 99.9 1.4E-23 3E-28 207.5 30.8 314 92-421 43-395 (402)
180 PLN02651 cysteine desulfurase 99.9 4.5E-24 9.6E-29 208.3 26.7 306 99-415 2-363 (364)
181 PRK14012 cysteine desulfurase; 99.9 4.8E-24 1E-28 211.0 27.0 311 98-421 5-375 (404)
182 PRK08133 O-succinylhomoserine 99.9 7.1E-24 1.5E-28 207.7 27.7 279 125-420 57-385 (390)
183 PRK02936 argD acetylornithine 99.9 1.3E-23 2.8E-28 206.1 29.2 319 92-422 26-373 (377)
184 PLN03227 serine palmitoyltrans 99.9 2.2E-23 4.9E-28 204.5 30.2 311 105-422 9-376 (392)
185 PRK07582 cystathionine gamma-l 99.9 2.5E-23 5.4E-28 202.3 30.0 275 124-421 46-365 (366)
186 TIGR01328 met_gam_lyase methio 99.9 6.8E-24 1.5E-28 207.8 26.2 217 124-356 54-280 (391)
187 cd00614 CGS_like CGS_like: Cys 99.9 1E-23 2.2E-28 205.8 27.1 280 125-421 36-366 (369)
188 PRK08776 cystathionine gamma-s 99.9 1.1E-23 2.4E-28 206.7 27.4 218 124-357 55-281 (405)
189 PLN02955 8-amino-7-oxononanoat 99.9 3.9E-23 8.4E-28 202.3 30.6 312 93-421 100-457 (476)
190 PRK07503 methionine gamma-lyas 99.9 3.1E-23 6.6E-28 204.0 28.9 217 124-356 60-286 (403)
191 PF12897 Aminotran_MocR: Alani 99.9 4E-23 8.7E-28 191.1 27.6 295 124-422 62-409 (425)
192 PRK07810 O-succinylhomoserine 99.9 2E-23 4.3E-28 205.0 26.7 280 124-420 65-399 (403)
193 PRK08861 cystathionine gamma-s 99.9 4.2E-23 9E-28 201.1 27.3 217 124-356 48-273 (388)
194 PRK05093 argD bifunctional N-s 99.9 4.6E-23 1E-27 203.7 27.9 313 92-422 37-394 (403)
195 PRK00854 rocD ornithine--oxo-a 99.9 8E-23 1.7E-27 202.1 28.8 315 92-422 38-395 (401)
196 TIGR00713 hemL glutamate-1-sem 99.9 9.7E-23 2.1E-27 202.8 28.7 319 91-421 44-415 (423)
197 PF00266 Aminotran_5: Aminotra 99.9 7E-23 1.5E-27 200.5 26.6 310 98-416 1-369 (371)
198 PTZ00125 ornithine aminotransf 99.9 1.3E-22 2.9E-27 200.6 28.6 321 92-422 28-389 (400)
199 PRK05968 hypothetical protein; 99.9 6.3E-23 1.4E-27 201.0 25.6 277 125-419 59-380 (389)
200 PRK07811 cystathionine gamma-s 99.9 6.8E-23 1.5E-27 200.7 25.5 280 124-420 56-383 (388)
201 PRK08064 cystathionine beta-ly 99.9 9.4E-23 2E-27 199.9 26.1 278 127-422 52-383 (390)
202 PRK07050 cystathionine beta-ly 99.9 8.7E-23 1.9E-27 200.1 25.2 280 124-420 60-386 (394)
203 KOG0258 Alanine aminotransfera 99.9 1.1E-22 2.4E-27 186.7 23.7 287 124-410 107-456 (475)
204 PRK08574 cystathionine gamma-s 99.9 4.3E-22 9.2E-27 194.6 27.3 217 124-356 48-272 (385)
205 TIGR01326 OAH_OAS_sulfhy OAH/O 99.9 3.2E-22 7E-27 197.8 26.1 163 124-299 52-219 (418)
206 PRK05937 8-amino-7-oxononanoat 99.9 2.5E-21 5.4E-26 189.2 30.7 309 95-422 4-347 (370)
207 PRK08088 4-aminobutyrate amino 99.9 7.1E-22 1.5E-26 196.3 26.9 327 91-422 37-417 (425)
208 cd00616 AHBA_syn 3-amino-5-hyd 99.9 2.4E-21 5.3E-26 188.2 29.8 251 127-392 16-298 (352)
209 TIGR01329 cysta_beta_ly_E cyst 99.9 1.5E-21 3.3E-26 190.5 28.2 275 127-420 45-370 (378)
210 PRK08248 O-acetylhomoserine am 99.9 1.4E-21 3.1E-26 193.0 27.5 244 125-384 60-364 (431)
211 PRK09028 cystathionine beta-ly 99.9 3.6E-21 7.8E-26 187.3 29.2 236 105-356 33-280 (394)
212 PRK07269 cystathionine gamma-s 99.9 2E-21 4.4E-26 188.3 26.2 280 124-420 49-359 (364)
213 PRK05939 hypothetical protein; 99.9 2.3E-21 5E-26 189.9 26.5 276 127-420 45-391 (397)
214 TIGR01324 cysta_beta_ly_B cyst 99.9 3.7E-21 7.9E-26 187.2 27.1 277 126-419 47-370 (377)
215 PRK12381 bifunctional succinyl 99.9 6.4E-21 1.4E-25 188.5 29.2 319 91-422 35-393 (406)
216 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.9 1.1E-20 2.4E-25 184.9 29.8 268 114-392 14-318 (375)
217 TIGR01814 kynureninase kynuren 99.9 6E-21 1.3E-25 188.9 27.9 313 95-422 26-404 (406)
218 TIGR02379 ECA_wecE TDP-4-keto- 99.9 8.5E-21 1.8E-25 185.0 28.4 268 111-392 11-319 (376)
219 PRK06702 O-acetylhomoserine am 99.9 2E-20 4.3E-25 183.7 30.4 278 127-420 59-419 (432)
220 PRK07671 cystathionine beta-ly 99.9 5.6E-21 1.2E-25 186.4 26.1 279 124-420 45-373 (377)
221 PRK04366 glycine dehydrogenase 99.9 1.5E-20 3.3E-25 188.9 29.9 316 100-422 73-445 (481)
222 PRK11658 UDP-4-amino-4-deoxy-L 99.9 7E-21 1.5E-25 186.4 26.5 267 111-391 14-321 (379)
223 COG0075 Serine-pyruvate aminot 99.9 5.1E-20 1.1E-24 174.9 31.0 309 105-420 12-355 (383)
224 PLN00144 acetylornithine trans 99.9 3E-20 6.4E-25 181.8 29.7 316 91-422 11-374 (382)
225 TIGR01885 Orn_aminotrans ornit 99.9 1.7E-20 3.6E-25 185.5 27.6 316 92-422 34-396 (401)
226 PRK13034 serine hydroxymethylt 99.9 4.1E-20 8.8E-25 182.8 29.9 318 96-422 29-389 (416)
227 TIGR03246 arg_catab_astC succi 99.9 1.8E-20 3.9E-25 184.7 27.2 314 92-422 32-389 (397)
228 PRK06084 O-acetylhomoserine am 99.9 1.2E-20 2.7E-25 186.2 25.3 244 125-384 54-359 (425)
229 PLN02624 ornithine-delta-amino 99.9 8.3E-20 1.8E-24 183.2 29.8 317 91-422 71-438 (474)
230 cd00615 Orn_deC_like Ornithine 99.9 1.3E-20 2.8E-25 178.4 22.3 223 125-351 55-293 (294)
231 PLN02509 cystathionine beta-ly 99.9 2.6E-20 5.7E-25 184.4 25.2 213 128-357 132-353 (464)
232 PRK06176 cystathionine gamma-s 99.9 6.4E-20 1.4E-24 179.0 27.1 216 124-356 45-269 (380)
233 TIGR00700 GABAtrnsam 4-aminobu 99.9 9.5E-20 2.1E-24 180.7 28.7 328 91-422 29-414 (420)
234 PRK05967 cystathionine beta-ly 99.9 1.3E-19 2.9E-24 176.1 26.0 214 127-356 62-283 (395)
235 TIGR03588 PseC UDP-4-keto-6-de 99.9 9.8E-19 2.1E-23 171.7 32.5 284 127-422 27-379 (380)
236 COG4992 ArgD Ornithine/acetylo 99.9 1.4E-19 3E-24 170.4 23.6 323 90-422 37-392 (404)
237 PRK09792 4-aminobutyrate trans 99.9 3.8E-19 8.2E-24 176.2 27.9 326 91-422 36-415 (421)
238 PRK05994 O-acetylhomoserine am 99.8 6.7E-19 1.4E-23 174.4 27.6 215 126-356 60-315 (427)
239 PTZ00094 serine hydroxymethylt 99.8 8.2E-19 1.8E-23 175.6 28.3 320 95-422 34-405 (452)
240 PRK08117 4-aminobutyrate amino 99.8 1.3E-18 2.8E-23 173.4 29.5 327 91-422 39-423 (433)
241 PRK08360 4-aminobutyrate amino 99.8 1.8E-18 3.9E-23 172.0 30.0 322 91-421 37-419 (443)
242 KOG1549 Cysteine desulfurase N 99.8 2E-19 4.4E-24 170.1 21.8 199 93-299 40-257 (428)
243 PRK00062 glutamate-1-semialdeh 99.8 1.2E-18 2.5E-23 173.2 28.0 320 92-420 47-419 (426)
244 PRK08134 O-acetylhomoserine am 99.8 8E-19 1.7E-23 173.5 26.1 243 126-384 61-364 (433)
245 PRK04612 argD acetylornithine 99.8 2.3E-18 5E-23 169.5 29.3 322 91-421 36-396 (408)
246 COG2008 GLY1 Threonine aldolas 99.8 2.3E-18 5E-23 159.1 26.7 308 103-422 6-340 (342)
247 PRK07812 O-acetylhomoserine am 99.8 1.6E-18 3.4E-23 171.3 27.3 243 127-384 67-368 (436)
248 PRK08114 cystathionine beta-ly 99.8 1.7E-18 3.7E-23 168.1 26.6 216 126-357 59-284 (395)
249 PLN02724 Molybdenum cofactor s 99.8 1.7E-18 3.8E-23 183.9 28.5 320 96-421 34-484 (805)
250 PRK06777 4-aminobutyrate amino 99.8 4E-18 8.6E-23 168.9 28.1 325 91-422 36-415 (421)
251 KOG1412 Aspartate aminotransfe 99.8 5.6E-18 1.2E-22 151.6 25.2 298 111-421 51-401 (410)
252 KOG1368 Threonine aldolase [Am 99.8 2.7E-18 5.9E-23 152.9 23.0 309 97-419 23-362 (384)
253 PRK13580 serine hydroxymethylt 99.8 9.6E-18 2.1E-22 164.7 28.8 318 95-421 49-441 (493)
254 cd00611 PSAT_like Phosphoserin 99.8 1.3E-18 2.8E-23 169.0 22.6 303 104-423 5-354 (355)
255 PRK15407 lipopolysaccharide bi 99.8 4.9E-18 1.1E-22 168.5 27.0 248 130-392 64-376 (438)
256 KOG1360 5-aminolevulinate synt 99.8 3.4E-18 7.3E-23 157.7 23.7 340 61-411 127-507 (570)
257 KOG1359 Glycine C-acetyltransf 99.8 2.8E-18 6.1E-23 152.4 21.5 312 95-420 67-407 (417)
258 PRK03080 phosphoserine aminotr 99.8 4.1E-18 8.9E-23 166.8 24.8 300 105-421 19-369 (378)
259 KOG2862 Alanine-glyoxylate ami 99.8 4.6E-17 9.9E-22 146.0 29.0 308 107-419 26-373 (385)
260 PRK06918 4-aminobutyrate amino 99.8 9.5E-18 2.1E-22 167.8 27.7 325 91-422 50-437 (451)
261 PRK07495 4-aminobutyrate amino 99.8 2.9E-17 6.4E-22 162.6 28.8 326 91-421 36-414 (425)
262 PRK05964 adenosylmethionine--8 99.8 2E-17 4.3E-22 164.4 27.6 324 91-421 38-418 (423)
263 PF01053 Cys_Met_Meta_PP: Cys/ 99.8 1.8E-17 3.9E-22 160.7 25.1 280 125-421 51-383 (386)
264 KOG1411 Aspartate aminotransfe 99.8 5.7E-18 1.2E-22 153.6 19.8 329 81-421 37-421 (427)
265 PRK05355 3-phosphoserine/phosp 99.8 1E-17 2.2E-22 162.4 22.8 302 105-422 10-355 (360)
266 PRK05613 O-acetylhomoserine am 99.8 3.7E-17 7.9E-22 161.6 25.7 215 127-356 67-325 (437)
267 COG0626 MetC Cystathionine bet 99.8 9.4E-17 2E-21 153.8 26.9 279 125-419 59-388 (396)
268 PRK06058 4-aminobutyrate amino 99.8 1.7E-16 3.7E-21 158.3 29.9 325 91-422 52-436 (443)
269 TIGR03372 putres_am_tran putre 99.8 1.7E-16 3.6E-21 157.2 29.3 319 91-421 71-437 (442)
270 PLN02414 glycine dehydrogenase 99.8 5.7E-17 1.2E-21 171.8 27.0 285 132-422 571-904 (993)
271 cd01494 AAT_I Aspartate aminot 99.8 4.2E-18 9.1E-23 147.2 15.4 164 131-297 2-169 (170)
272 TIGR01364 serC_1 phosphoserine 99.8 4.2E-17 9.1E-22 157.4 23.5 273 131-422 39-345 (349)
273 PRK02769 histidine decarboxyla 99.8 1.1E-16 2.3E-21 155.7 25.7 273 132-421 68-365 (380)
274 COG0399 WecE Predicted pyridox 99.8 1.4E-16 3.1E-21 151.7 25.0 265 111-390 15-312 (374)
275 TIGR01788 Glu-decarb-GAD gluta 99.8 4.4E-16 9.4E-21 153.6 28.4 311 108-421 52-425 (431)
276 PRK11522 putrescine--2-oxoglut 99.8 5E-16 1.1E-20 154.8 29.1 323 91-420 78-446 (459)
277 PRK06434 cystathionine gamma-l 99.8 2.4E-16 5.1E-21 153.3 26.0 274 127-420 62-379 (384)
278 TIGR02407 ectoine_ectB diamino 99.8 4.5E-16 9.8E-21 153.8 27.7 325 91-421 31-405 (412)
279 PF01041 DegT_DnrJ_EryC1: DegT 99.8 1.7E-16 3.6E-21 154.7 24.1 251 129-394 25-310 (363)
280 PLN03226 serine hydroxymethylt 99.8 5.3E-16 1.1E-20 155.0 28.1 318 96-421 35-415 (475)
281 TIGR01366 serC_3 phosphoserine 99.8 2.8E-16 6E-21 152.7 25.3 300 105-421 10-356 (361)
282 PRK03715 argD acetylornithine 99.8 6E-16 1.3E-20 152.0 26.6 316 92-420 33-388 (395)
283 PLN02271 serine hydroxymethylt 99.7 2.2E-15 4.9E-20 148.7 29.3 318 95-421 148-536 (586)
284 PLN03032 serine decarboxylase; 99.7 9.9E-16 2.1E-20 148.0 26.2 274 132-421 69-369 (374)
285 PRK08593 4-aminobutyrate amino 99.7 3.6E-15 7.7E-20 148.6 30.2 321 91-420 38-424 (445)
286 PRK09264 diaminobutyrate--2-ox 99.7 3.3E-15 7.1E-20 148.4 29.8 326 91-422 35-410 (425)
287 PRK06541 hypothetical protein; 99.7 4.6E-15 9.9E-20 148.2 30.5 323 91-420 48-450 (460)
288 TIGR02618 tyr_phenol_ly tyrosi 99.7 9.4E-15 2E-19 141.8 29.9 312 97-422 40-423 (450)
289 TIGR03531 selenium_SpcS O-phos 99.7 3E-15 6.5E-20 147.0 26.9 256 132-388 108-386 (444)
290 PF00464 SHMT: Serine hydroxym 99.7 6.1E-16 1.3E-20 148.8 20.6 303 96-407 21-380 (399)
291 PRK05769 4-aminobutyrate amino 99.7 7.8E-15 1.7E-19 146.0 29.0 320 91-420 50-434 (441)
292 PLN02760 4-aminobutyrate:pyruv 99.7 9.7E-15 2.1E-19 147.0 29.3 320 91-420 85-486 (504)
293 COG0112 GlyA Glycine/serine hy 99.7 5.8E-15 1.3E-19 137.4 25.1 317 96-421 27-386 (413)
294 PF04864 Alliinase_C: Allinase 99.7 3E-16 6.5E-21 143.9 16.0 272 131-420 45-360 (363)
295 PRK07678 aminotransferase; Val 99.7 1.8E-14 3.9E-19 143.8 30.2 325 91-420 43-444 (451)
296 TIGR00709 dat 2,4-diaminobutyr 99.7 2.2E-14 4.9E-19 143.0 30.3 321 91-419 35-429 (442)
297 PRK06062 hypothetical protein; 99.7 2.1E-14 4.7E-19 143.2 30.1 320 91-420 49-440 (451)
298 COG0160 GabT 4-aminobutyrate a 99.7 7.5E-15 1.6E-19 142.5 25.5 325 91-422 52-439 (447)
299 TIGR01365 serC_2 phosphoserine 99.7 1E-14 2.2E-19 141.0 25.6 292 113-419 19-367 (374)
300 KOG1357 Serine palmitoyltransf 99.7 1.1E-15 2.4E-20 143.5 17.4 303 108-421 155-495 (519)
301 PRK06105 aminotransferase; Pro 99.7 2.7E-14 5.8E-19 142.8 28.5 319 91-419 44-443 (460)
302 PRK12389 glutamate-1-semialdeh 99.7 1E-13 2.3E-18 137.7 31.7 319 91-420 49-422 (428)
303 PRK04013 argD acetylornithine/ 99.7 9.4E-15 2E-19 141.4 23.4 300 92-421 21-353 (364)
304 PRK07986 adenosylmethionine--8 99.7 4.7E-14 1E-18 139.6 28.8 319 91-419 39-417 (428)
305 PRK06149 hypothetical protein; 99.7 2.6E-14 5.7E-19 154.9 29.3 322 92-421 582-966 (972)
306 KOG0053 Cystathionine beta-lya 99.7 3.9E-14 8.6E-19 134.2 26.4 217 125-357 73-298 (409)
307 PRK06082 4-aminobutyrate amino 99.7 6.3E-14 1.4E-18 140.0 29.5 321 91-420 68-446 (459)
308 PRK09221 beta alanine--pyruvat 99.7 4.4E-14 9.5E-19 140.7 27.5 320 91-420 45-438 (445)
309 PRK07046 aminotransferase; Val 99.7 2.2E-13 4.7E-18 135.8 32.2 313 91-420 71-445 (453)
310 PRK04311 selenocysteine syntha 99.7 1.5E-13 3.2E-18 136.5 30.6 301 109-422 98-461 (464)
311 PRK12403 putative aminotransfe 99.7 1.5E-13 3.3E-18 137.5 30.8 321 91-420 50-447 (460)
312 PRK13360 omega amino acid--pyr 99.7 1.1E-13 2.5E-18 137.6 29.6 320 91-420 42-435 (442)
313 PRK05630 adenosylmethionine--8 99.7 2E-13 4.4E-18 135.1 30.2 319 91-420 36-415 (422)
314 PRK05965 hypothetical protein; 99.7 1.5E-13 3.1E-18 137.5 29.3 320 91-419 42-441 (459)
315 COG1103 Archaea-specific pyrid 99.7 1.9E-13 4.1E-18 120.6 26.1 302 110-422 30-377 (382)
316 PRK06148 hypothetical protein; 99.7 8.5E-14 1.8E-18 151.0 29.3 323 92-420 621-1005(1013)
317 PRK06173 adenosylmethionine--8 99.7 2.8E-13 6.1E-18 134.2 30.6 321 91-421 40-418 (429)
318 PRK07483 hypothetical protein; 99.7 3.1E-13 6.7E-18 134.6 31.0 325 91-419 26-431 (443)
319 PRK05639 4-aminobutyrate amino 99.6 5E-13 1.1E-17 133.4 32.4 324 91-421 49-436 (457)
320 PF01212 Beta_elim_lyase: Beta 99.6 3.4E-16 7.4E-21 146.3 8.9 251 109-367 7-284 (290)
321 PRK07482 hypothetical protein; 99.6 2.2E-13 4.7E-18 136.3 29.3 322 91-419 46-448 (461)
322 PF01276 OKR_DC_1: Orn/Lys/Arg 99.6 2.3E-14 5E-19 138.6 21.3 259 131-394 68-401 (417)
323 TIGR00508 bioA adenosylmethion 99.6 2.1E-13 4.6E-18 135.3 28.6 320 92-421 42-422 (427)
324 PLN02452 phosphoserine transam 99.6 7.2E-14 1.6E-18 135.1 24.2 306 97-422 8-360 (365)
325 PRK07480 putative aminotransfe 99.6 1.3E-13 2.8E-18 137.7 26.6 319 91-419 46-442 (456)
326 PRK07036 hypothetical protein; 99.6 2.7E-13 5.9E-18 135.8 28.9 319 91-419 47-446 (466)
327 COG2873 MET17 O-acetylhomoseri 99.6 1.1E-13 2.3E-18 127.7 23.2 283 123-419 53-419 (426)
328 PRK00615 glutamate-1-semialdeh 99.6 2.3E-13 5E-18 134.8 27.6 323 91-421 49-424 (433)
329 PRK06917 hypothetical protein; 99.6 7.7E-13 1.7E-17 131.9 31.5 325 91-420 27-432 (447)
330 PRK06943 adenosylmethionine--8 99.6 6.2E-13 1.4E-17 132.7 30.8 319 91-419 50-440 (453)
331 PRK13237 tyrosine phenol-lyase 99.6 1.1E-12 2.5E-17 127.7 30.9 290 124-422 72-430 (460)
332 PRK07481 hypothetical protein; 99.6 6.6E-13 1.4E-17 132.6 29.5 319 92-420 39-440 (449)
333 PRK07030 adenosylmethionine--8 99.6 8.8E-13 1.9E-17 132.0 28.7 320 91-420 43-438 (466)
334 PRK15029 arginine decarboxylas 99.6 1.1E-12 2.4E-17 135.8 30.1 167 127-297 203-399 (755)
335 PLN02263 serine decarboxylase 99.6 7.3E-13 1.6E-17 130.2 27.2 273 133-421 137-436 (470)
336 PLN02482 glutamate-1-semialdeh 99.6 5.7E-13 1.2E-17 133.1 26.4 315 91-421 95-469 (474)
337 TIGR00474 selA seryl-tRNA(sec) 99.6 2.5E-12 5.3E-17 127.5 30.0 297 109-419 93-453 (454)
338 PRK05367 glycine dehydrogenase 99.6 2.1E-12 4.6E-17 137.9 30.8 319 96-422 500-872 (954)
339 PRK13578 ornithine decarboxyla 99.6 2.2E-12 4.8E-17 132.4 29.4 163 131-298 176-369 (720)
340 PRK08742 adenosylmethionine--8 99.6 1.8E-12 4E-17 129.7 28.3 320 91-420 60-462 (472)
341 PRK06916 adenosylmethionine--8 99.6 1.8E-12 3.9E-17 129.8 28.1 319 91-419 52-449 (460)
342 TIGR00461 gcvP glycine dehydro 99.6 1.3E-12 2.8E-17 137.3 28.0 284 132-422 533-864 (939)
343 TIGR00699 GABAtrns_euk 4-amino 99.6 7.4E-13 1.6E-17 131.6 24.0 318 91-420 54-461 (464)
344 PLN02880 tyrosine decarboxylas 99.6 1.8E-12 3.8E-17 130.4 25.8 288 133-421 126-480 (490)
345 COG0076 GadB Glutamate decarbo 99.6 1.6E-12 3.5E-17 128.7 25.0 284 109-393 74-403 (460)
346 PRK06938 diaminobutyrate--2-ox 99.6 6.2E-12 1.4E-16 125.8 29.5 322 91-420 59-455 (464)
347 PRK15399 lysine decarboxylase 99.6 8.9E-12 1.9E-16 127.8 30.8 281 131-422 197-556 (713)
348 COG0001 HemL Glutamate-1-semia 99.6 2.3E-12 5E-17 123.1 24.6 321 91-420 49-423 (432)
349 PRK12566 glycine dehydrogenase 99.5 2.3E-12 5E-17 134.7 26.3 286 132-422 546-873 (954)
350 PRK15400 lysine decarboxylase 99.5 7.1E-12 1.5E-16 128.6 29.5 281 131-422 197-556 (714)
351 PRK06931 diaminobutyrate--2-ox 99.5 8.8E-12 1.9E-16 124.7 27.6 323 91-420 54-449 (459)
352 COG1982 LdcC Arginine/lysine/o 99.5 3E-11 6.5E-16 119.3 29.4 285 130-420 71-403 (557)
353 PRK05367 glycine dehydrogenase 99.5 1.8E-11 3.9E-16 130.9 28.8 265 132-420 124-437 (954)
354 PRK12462 phosphoserine aminotr 99.5 1.5E-11 3.1E-16 117.9 25.2 304 98-422 6-359 (364)
355 PLN02590 probable tyrosine dec 99.5 1.1E-11 2.5E-16 124.8 25.2 288 133-421 174-525 (539)
356 PRK08297 L-lysine aminotransfe 99.5 2.8E-11 6.1E-16 120.6 27.5 315 93-419 43-435 (443)
357 PF06838 Met_gamma_lyase: Meth 99.5 5.6E-12 1.2E-16 116.9 18.5 192 111-309 27-249 (403)
358 PLN02414 glycine dehydrogenase 99.5 3.1E-11 6.7E-16 128.6 26.9 299 101-421 109-465 (993)
359 TIGR03251 LAT_fam L-lysine 6-t 99.5 1.6E-11 3.5E-16 122.2 23.4 318 93-421 36-427 (431)
360 KOG1404 Alanine-glyoxylate ami 99.4 4.8E-11 1E-15 111.0 23.4 322 91-417 46-430 (442)
361 TIGR03799 NOD_PanD_pyr putativ 99.4 8.2E-11 1.8E-15 118.8 26.4 271 149-420 162-517 (522)
362 COG0161 BioA Adenosylmethionin 99.4 2.9E-10 6.3E-15 110.2 28.1 320 93-421 42-439 (449)
363 PRK06209 glutamate-1-semialdeh 99.4 4.7E-11 1E-15 118.9 22.5 308 91-420 44-400 (431)
364 PLN02974 adenosylmethionine-8- 99.4 3.5E-10 7.5E-15 119.1 27.8 316 96-420 366-813 (817)
365 TIGR02617 tnaA_trp_ase tryptop 99.3 2.1E-09 4.5E-14 103.9 26.7 312 97-422 43-438 (467)
366 KOG1358 Serine palmitoyltransf 99.3 2.7E-10 5.8E-15 105.9 17.2 317 94-421 93-458 (467)
367 KOG1401 Acetylornithine aminot 99.3 2.4E-09 5.3E-14 100.4 23.4 277 90-370 51-370 (433)
368 COG3844 Kynureninase [Amino ac 99.2 8.6E-09 1.9E-13 94.0 23.5 258 132-407 79-380 (407)
369 TIGR00461 gcvP glycine dehydro 99.2 1.4E-08 3E-13 107.4 28.3 295 101-419 70-425 (939)
370 KOG1402 Ornithine aminotransfe 99.2 2E-09 4.3E-14 98.0 18.4 317 90-422 54-421 (427)
371 COG4100 Cystathionine beta-lya 99.1 5.8E-09 1.3E-13 93.9 18.8 189 111-306 38-257 (416)
372 PF00282 Pyridoxal_deC: Pyrido 99.1 1.8E-09 3.9E-14 105.1 17.2 237 133-370 83-372 (373)
373 PF00202 Aminotran_3: Aminotra 99.1 2.9E-09 6.2E-14 102.7 17.7 275 92-371 13-338 (339)
374 KOG2467 Glycine/serine hydroxy 99.1 1.4E-08 3E-13 93.9 20.9 310 98-420 43-421 (477)
375 COG1003 GcvP Glycine cleavage 99.0 1.6E-07 3.5E-12 89.0 21.4 282 133-422 113-444 (496)
376 PLN02994 1-aminocyclopropane-1 99.0 2.9E-09 6.3E-14 89.7 8.4 85 94-181 42-152 (153)
377 PF02347 GDC-P: Glycine cleava 98.9 4.8E-08 1E-12 95.0 17.8 267 133-420 114-427 (429)
378 COG1921 SelA Selenocysteine sy 98.9 2.1E-07 4.5E-12 88.6 20.4 212 110-327 40-267 (395)
379 KOG1403 Predicted alanine-glyo 98.9 5.1E-08 1.1E-12 87.9 15.2 323 91-421 43-433 (452)
380 COG0403 GcvP Glycine cleavage 98.9 6.7E-06 1.5E-10 78.3 27.9 301 100-420 80-445 (450)
381 TIGR03811 tyr_de_CO2_Ent tyros 98.9 9E-07 1.9E-11 90.6 24.0 197 172-370 224-501 (608)
382 KOG1383 Glutamate decarboxylas 98.7 3.6E-06 7.8E-11 80.7 21.8 259 133-395 124-415 (491)
383 COG3033 TnaA Tryptophanase [Am 98.6 1.8E-05 3.9E-10 73.5 22.1 289 125-422 74-441 (471)
384 KOG0629 Glutamate decarboxylas 98.5 3.3E-05 7.2E-10 73.3 20.9 289 133-422 145-506 (510)
385 COG1932 SerC Phosphoserine ami 98.4 4.7E-05 1E-09 71.4 19.9 276 131-422 52-360 (365)
386 PRK12566 glycine dehydrogenase 98.4 0.00029 6.3E-09 74.9 27.3 261 133-419 128-435 (954)
387 PF03841 SelA: L-seryl-tRNA se 98.3 6E-07 1.3E-11 84.8 5.0 214 131-353 49-296 (367)
388 PF05889 SLA_LP_auto_ag: Solub 97.9 0.0022 4.7E-08 61.6 20.2 278 141-421 68-386 (389)
389 KOG2040 Glycine dehydrogenase 97.9 0.0022 4.7E-08 64.3 19.9 282 133-421 586-911 (1001)
390 KOG3846 L-kynurenine hydrolase 97.8 0.0033 7.1E-08 57.6 18.2 280 131-421 113-457 (465)
391 KOG1405 4-aminobutyrate aminot 97.8 0.00091 2E-08 62.4 14.9 198 207-420 255-478 (484)
392 KOG0628 Aromatic-L-amino-acid/ 97.7 0.015 3.2E-07 56.4 22.3 248 172-421 184-464 (511)
393 KOG2040 Glycine dehydrogenase 97.1 0.32 7E-06 49.4 23.2 264 133-418 167-476 (1001)
394 KOG2790 Phosphoserine aminotra 95.7 0.68 1.5E-05 42.5 15.1 272 132-422 55-365 (370)
395 KOG3843 Predicted serine hydro 93.2 0.65 1.4E-05 42.1 8.8 120 188-310 121-252 (432)
396 PLN02672 methionine S-methyltr 87.4 7.2 0.00016 43.4 12.2 172 127-308 424-626 (1082)
397 COG2102 Predicted ATPases of P 86.9 12 0.00026 33.3 11.1 155 148-317 3-177 (223)
398 PF08247 ENOD40: ENOD40 protei 84.0 0.41 8.9E-06 21.2 0.3 10 12-21 3-12 (12)
399 TIGR03590 PseG pseudaminic aci 78.2 20 0.00044 33.4 9.9 84 166-255 27-112 (279)
400 PRK08265 short chain dehydroge 64.0 70 0.0015 29.1 10.1 97 147-246 7-109 (261)
401 KOG1546 Metacaspase involved i 57.2 1.1E+02 0.0024 29.0 9.6 105 132-260 88-209 (362)
402 COG0373 HemA Glutamyl-tRNA red 53.2 1.2E+02 0.0027 30.0 9.9 101 139-255 170-274 (414)
403 COG0505 CarA Carbamoylphosphat 52.7 62 0.0013 31.1 7.4 71 169-247 178-250 (368)
404 COG0031 CysK Cysteine synthase 50.9 65 0.0014 30.4 7.2 98 144-243 59-165 (300)
405 COG0816 Predicted endonuclease 50.7 34 0.00073 28.3 4.8 53 205-257 40-99 (141)
406 cd06448 L-Ser-dehyd Serine deh 49.2 1.5E+02 0.0032 28.2 9.7 96 147-245 52-149 (316)
407 PF01282 Ribosomal_S24e: Ribos 49.0 22 0.00047 26.6 3.1 26 127-152 11-36 (84)
408 TIGR00290 MJ0570_dom MJ0570-re 49.0 2E+02 0.0044 25.9 12.2 93 149-249 4-113 (223)
409 KOG1201 Hydroxysteroid 17-beta 48.2 87 0.0019 29.4 7.5 138 144-289 36-182 (300)
410 PF05368 NmrA: NmrA-like famil 47.7 86 0.0019 27.9 7.6 62 161-229 13-75 (233)
411 PF02571 CbiJ: Precorrin-6x re 46.9 2.3E+02 0.005 25.9 11.9 111 133-245 117-248 (249)
412 COG4221 Short-chain alcohol de 46.8 1.1E+02 0.0024 27.9 7.7 95 148-246 7-111 (246)
413 PRK06500 short chain dehydroge 46.1 2E+02 0.0043 25.6 9.9 100 147-246 7-110 (249)
414 PF13552 DUF4127: Protein of u 45.3 3.6E+02 0.0077 27.6 13.8 24 142-166 224-247 (497)
415 COG0514 RecQ Superfamily II DN 45.2 78 0.0017 32.9 7.4 103 148-261 37-146 (590)
416 PRK09189 uroporphyrinogen-III 44.6 1.7E+02 0.0036 26.4 9.0 85 142-228 92-180 (240)
417 CHL00200 trpA tryptophan synth 44.1 2.6E+02 0.0057 25.8 13.9 55 184-246 112-166 (263)
418 TIGR03089 conserved hypothetic 44.0 92 0.002 27.9 7.1 67 147-219 153-226 (227)
419 PLN02556 cysteine synthase/L-3 43.8 1.1E+02 0.0023 30.0 7.9 83 148-232 113-197 (368)
420 PRK06935 2-deoxy-D-gluconate 3 43.2 2E+02 0.0043 25.9 9.4 108 136-246 5-121 (258)
421 PLN02591 tryptophan synthase 42.2 2.8E+02 0.006 25.5 15.6 72 158-233 94-169 (250)
422 PF02571 CbiJ: Precorrin-6x re 42.1 93 0.002 28.5 6.8 67 148-224 2-72 (249)
423 PRK08589 short chain dehydroge 41.3 2.3E+02 0.005 25.9 9.6 96 147-246 7-113 (272)
424 cd05013 SIS_RpiR RpiR-like pro 40.6 1.7E+02 0.0036 23.2 7.7 17 148-164 16-32 (139)
425 COG0159 TrpA Tryptophan syntha 40.0 3.1E+02 0.0067 25.4 13.1 131 183-352 114-265 (265)
426 COG0300 DltE Short-chain dehyd 39.3 3.2E+02 0.0069 25.4 10.1 100 149-248 8-116 (265)
427 PRK08057 cobalt-precorrin-6x r 38.2 1.3E+02 0.0028 27.6 7.0 71 147-228 3-76 (248)
428 PF05127 Helicase_RecD: Helica 37.5 17 0.00037 31.4 1.2 117 153-283 8-125 (177)
429 COG1197 Mfd Transcription-repa 37.4 6.7E+02 0.014 28.5 13.8 168 143-329 613-804 (1139)
430 PLN03013 cysteine synthase 36.8 1.8E+02 0.0039 29.1 8.3 81 148-230 177-259 (429)
431 PRK05928 hemD uroporphyrinogen 36.4 1.8E+02 0.0039 26.0 7.9 87 142-229 98-188 (249)
432 PRK05872 short chain dehydroge 36.3 3.6E+02 0.0077 25.0 10.6 98 146-246 9-115 (296)
433 PRK10892 D-arabinose 5-phospha 36.2 2.4E+02 0.0052 26.8 9.0 99 133-232 35-136 (326)
434 PLN02565 cysteine synthase 36.0 1.8E+02 0.0038 27.8 8.0 50 149-199 70-121 (322)
435 PF14097 SpoVAE: Stage V sporu 35.8 1.5E+02 0.0032 25.3 6.3 86 208-296 14-107 (180)
436 TIGR00715 precor6x_red precorr 35.7 1.3E+02 0.0028 27.8 6.7 71 148-225 2-72 (256)
437 PRK06079 enoyl-(acyl carrier p 35.3 3.1E+02 0.0067 24.7 9.3 96 147-246 8-117 (252)
438 PRK07063 short chain dehydroge 35.1 3.3E+02 0.0072 24.4 10.1 98 146-246 7-116 (260)
439 COG2004 RPS24A Ribosomal prote 35.1 52 0.0011 25.7 3.3 26 127-152 30-55 (107)
440 PRK08862 short chain dehydroge 34.7 1.9E+02 0.0041 25.7 7.7 76 147-225 6-90 (227)
441 PF02702 KdpD: Osmosensitive K 34.5 1.3E+02 0.0027 26.7 6.0 96 152-251 15-120 (211)
442 PRK12936 3-ketoacyl-(acyl-carr 34.3 3.3E+02 0.0071 24.0 9.7 97 147-246 7-110 (245)
443 cd01018 ZntC Metal binding pro 34.1 2.5E+02 0.0054 25.8 8.5 72 169-251 169-244 (266)
444 PRK06484 short chain dehydroge 33.9 2.1E+02 0.0045 29.1 8.7 128 148-289 271-410 (520)
445 cd05014 SIS_Kpsf KpsF-like pro 33.5 1.9E+02 0.0042 22.7 6.8 15 150-164 5-19 (128)
446 PRK04210 phosphoenolpyruvate c 33.2 4.5E+02 0.0097 27.4 10.4 85 131-215 10-107 (601)
447 PF01902 ATP_bind_4: ATP-bindi 33.1 3E+02 0.0066 24.6 8.5 94 149-250 4-114 (218)
448 COG1087 GalE UDP-glucose 4-epi 33.1 1.8E+02 0.0038 27.6 7.0 71 148-223 2-72 (329)
449 TIGR00289 conserved hypothetic 32.9 3.7E+02 0.0079 24.2 9.7 96 149-252 4-116 (222)
450 PRK07097 gluconate 5-dehydroge 32.3 3.8E+02 0.0082 24.2 10.5 100 144-246 8-117 (265)
451 cd06578 HemD Uroporphyrinogen- 32.2 2.4E+02 0.0051 24.9 8.0 61 169-229 121-184 (239)
452 CHL00197 carA carbamoyl-phosph 32.0 1.8E+02 0.0039 28.5 7.4 67 170-244 192-260 (382)
453 PF03652 UPF0081: Uncharacteri 31.5 1E+02 0.0023 25.2 4.9 56 202-257 35-98 (135)
454 TIGR00262 trpA tryptophan synt 31.2 2.5E+02 0.0054 25.8 7.9 57 182-246 106-162 (256)
455 PRK07424 bifunctional sterol d 31.1 4.8E+02 0.01 25.9 10.3 97 144-246 176-272 (406)
456 PRK10494 hypothetical protein; 31.1 1.5E+02 0.0033 27.3 6.4 69 131-200 138-210 (259)
457 COG1587 HemD Uroporphyrinogen- 30.8 4E+02 0.0086 24.1 9.2 78 151-228 104-185 (248)
458 TIGR00715 precor6x_red precorr 30.8 3.4E+02 0.0074 25.0 8.6 60 185-245 191-252 (256)
459 TIGR01137 cysta_beta cystathio 30.8 2.7E+02 0.0059 27.8 8.8 52 147-199 63-116 (454)
460 PRK12481 2-deoxy-D-gluconate 3 30.8 4E+02 0.0086 23.9 10.0 97 147-246 9-113 (251)
461 cd00951 KDGDH 5-dehydro-4-deox 30.7 1.1E+02 0.0024 28.6 5.6 48 198-246 11-61 (289)
462 PRK01178 rps24e 30S ribosomal 30.5 68 0.0015 24.8 3.3 26 127-152 29-54 (99)
463 KOG3424 40S ribosomal protein 30.5 70 0.0015 25.3 3.4 26 126-151 32-57 (132)
464 PRK05867 short chain dehydroge 30.5 3.8E+02 0.0081 24.0 9.1 99 145-246 8-116 (253)
465 PLN00011 cysteine synthase 30.4 2.6E+02 0.0057 26.6 8.2 52 147-199 70-123 (323)
466 cd00408 DHDPS-like Dihydrodipi 30.4 1.3E+02 0.0028 27.9 6.0 58 194-252 4-71 (281)
467 PRK06841 short chain dehydroge 30.1 4E+02 0.0086 23.7 9.2 100 144-246 13-119 (255)
468 PF00290 Trp_syntA: Tryptophan 30.1 3.9E+02 0.0085 24.6 8.8 60 171-234 117-179 (259)
469 PRK07067 sorbitol dehydrogenas 29.9 4.1E+02 0.0088 23.8 9.7 97 147-246 7-110 (257)
470 COG0036 Rpe Pentose-5-phosphat 29.9 3.4E+02 0.0075 24.3 8.0 58 182-245 100-159 (220)
471 PRK06194 hypothetical protein; 29.8 4.3E+02 0.0094 24.1 10.0 97 147-246 7-113 (287)
472 PRK11337 DNA-binding transcrip 29.8 3.4E+02 0.0074 25.2 8.8 12 149-160 144-155 (292)
473 TIGR00683 nanA N-acetylneurami 29.7 3.2E+02 0.0069 25.6 8.5 87 149-255 73-165 (290)
474 cd01561 CBS_like CBS_like: Thi 29.7 2.8E+02 0.006 25.9 8.1 52 147-199 54-107 (291)
475 PF07179 SseB: SseB protein N- 29.6 71 0.0015 25.1 3.6 64 169-243 60-124 (124)
476 PRK11557 putative DNA-binding 29.6 4.2E+02 0.0091 24.3 9.3 14 150-163 133-146 (278)
477 PRK08339 short chain dehydroge 29.6 4.3E+02 0.0093 23.9 9.3 97 147-246 9-115 (263)
478 PF01408 GFO_IDH_MocA: Oxidore 29.2 2.7E+02 0.0058 21.5 10.0 91 150-257 5-96 (120)
479 PRK05717 oxidoreductase; Valid 29.1 3.6E+02 0.0077 24.1 8.7 76 147-225 11-91 (255)
480 TIGR00262 trpA tryptophan synt 28.8 4.6E+02 0.01 24.1 14.5 141 88-234 31-179 (256)
481 PRK00109 Holliday junction res 28.4 1.6E+02 0.0034 24.2 5.4 54 204-257 40-100 (138)
482 cd01137 PsaA Metal binding pro 28.2 4.1E+02 0.0088 24.8 8.9 71 170-250 177-252 (287)
483 COG4229 Predicted enolase-phos 28.2 2.1E+02 0.0045 24.9 6.0 98 131-233 105-213 (229)
484 PRK07231 fabG 3-ketoacyl-(acyl 27.9 4.3E+02 0.0092 23.4 9.9 97 147-246 6-112 (251)
485 KOG4132 Uroporphyrinogen III s 27.8 86 0.0019 28.1 3.9 49 180-228 16-65 (260)
486 PRK03170 dihydrodipicolinate s 27.8 1.6E+02 0.0035 27.5 6.2 58 194-252 8-75 (292)
487 PHA02678 hypothetical protein; 27.8 1E+02 0.0022 22.9 3.6 73 170-259 5-84 (89)
488 PRK11070 ssDNA exonuclease Rec 27.7 7.2E+02 0.016 26.0 11.8 94 152-252 52-156 (575)
489 PRK07478 short chain dehydroge 27.7 4.2E+02 0.0091 23.6 8.9 97 147-246 7-114 (254)
490 TIGR03325 BphB_TodD cis-2,3-di 27.5 3.4E+02 0.0074 24.4 8.3 76 147-225 6-86 (262)
491 CHL00200 trpA tryptophan synth 27.4 2.8E+02 0.006 25.7 7.4 92 158-253 107-208 (263)
492 KOG1177 Long chain fatty acid 27.4 2.4E+02 0.0052 28.6 7.2 75 145-223 235-329 (596)
493 PRK07523 gluconate 5-dehydroge 27.3 4.5E+02 0.0097 23.4 9.7 98 145-245 9-116 (255)
494 PRK08277 D-mannonate oxidoredu 27.2 4.8E+02 0.01 23.7 9.6 78 145-225 9-94 (278)
495 COG0656 ARA1 Aldo/keto reducta 27.2 5.2E+02 0.011 24.2 9.6 22 131-153 54-75 (280)
496 cd01017 AdcA Metal binding pro 27.0 4.1E+02 0.0088 24.6 8.7 72 169-250 170-246 (282)
497 PRK06114 short chain dehydroge 26.9 4.6E+02 0.01 23.4 9.4 101 143-246 5-116 (254)
498 PRK12564 carbamoyl phosphate s 26.8 2.5E+02 0.0054 27.4 7.3 55 170-232 177-233 (360)
499 PRK06139 short chain dehydroge 26.7 3.7E+02 0.008 25.6 8.5 95 147-245 8-113 (330)
500 PRK05752 uroporphyrinogen-III 26.6 1E+02 0.0022 28.2 4.5 60 170-229 3-66 (255)
No 1
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1e-57 Score=446.84 Aligned_cols=365 Identities=82% Similarity=1.317 Sum_probs=329.3
Q ss_pred cCCCCCchhHHHHhcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHH
Q 014492 58 QRRLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAA 137 (423)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y~~~g~~~lr~~ 137 (423)
+..++...++++.+.++.+|.+...+...+++++..+.++|+|+.|+|+++++|.+.+++.+....+.||+++..+||++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~n~~p~~~~~~v~~a~~~~~~~~~Yp~~~~~~lr~~ 94 (380)
T PLN03026 15 KQSTSGDSFIRKHILQLAPYQPILPFEVLSAQLGRKPEDIVKLDANENPYGPPPEVLEALGNMKFPYVYPDPESRRLRAA 94 (380)
T ss_pred cccccHhHHhhHHhhcCCCCCCCCChHHHHHHhCCCccceEEccCCCCCCCCCHHHHHHHHhhHhhccCCCCCHHHHHHH
Confidence 44567788899999999998777778888888887778899999999999999999999876433356898888999999
Q ss_pred HHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcC
Q 014492 138 LAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE 217 (423)
Q Consensus 138 ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~ 217 (423)
+++++++++++|++|+|+++++..++..++++||+|++++|+|..|...++..|++++.+|.++++.+|++++++.+...
T Consensus 95 ia~~~~~~~~~I~~t~Ga~~~i~~~~~~~~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~ 174 (380)
T PLN03026 95 LAEDSGLESENILVGCGADELIDLLMRCVLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRTPDFSLDVPRIVEAVETH 174 (380)
T ss_pred HHHHhCcChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCCCcCHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999998777899999999998447
Q ss_pred CceEEEEcCCCCCcCcCCCHHHHHHHHcCCCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCcccccccc
Q 014492 218 KPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF 297 (423)
Q Consensus 218 ~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~ 297 (423)
++++|++|+||||||.+++.+++++|++..++||+||+|.+|.+.++....+...+++++++||||.||++|+|+||+++
T Consensus 175 ~~~~v~l~~P~NPTG~~~~~~~l~~l~~~~~~vi~DeaY~~~~~~~~~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~ 254 (380)
T PLN03026 175 KPKLLFLTSPNNPDGSIISDDDLLKILELPILVVLDEAYIEFSTQESRMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAF 254 (380)
T ss_pred CCcEEEEeCCCCCCCCCCCHHHHHHHHhcCCEEEEECcchhhcCCcchHHHHHhCCCEEEEecchHhhcCccccceeeec
Confidence 89999999999999999999999999987789999999999986554445555678999999999999999999999999
Q ss_pred CHHHHHHHHHhcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHH
Q 014492 298 PLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAK 377 (423)
Q Consensus 298 ~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~ 377 (423)
++++++.+.+...+++++.++|.++.++|++.+|+++.++.++++++++.+.|+++++..+.|++++|+|++++++.++.
T Consensus 255 ~~~~i~~l~~~~~~~~~~~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~ 334 (380)
T PLN03026 255 PLSIIEYLWRAKQPYNVSVAAEVAACAALSNPKYLEDVKNALVEERERLFGLLKEVPFLEPYPSDANFILCRVTSGRDAK 334 (380)
T ss_pred CHHHHHHHHHhcCCCCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCCCCeECCCCCeEEEEECCCCCCHH
Confidence 99999999998888999999999999999988899999999999999999999998877778999999999998667889
Q ss_pred HHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 378 KLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 378 ~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
++.+.|.++||.|+++..+..++++||+++..+++++|.++++++
T Consensus 335 ~~~~~l~~~gI~v~~~~~~~~~~~lRis~~~~~~~~~l~~al~~~ 379 (380)
T PLN03026 335 KLKEDLAKMGVMVRHYNSKELKGYIRVSVGKPEHTDALMEALKQL 379 (380)
T ss_pred HHHHHHHHCCeEEEECCCCCCCCEEEEecCCHHHHHHHHHHHHHh
Confidence 999999999999999876556789999999988899999999876
No 2
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.6e-57 Score=434.18 Aligned_cols=342 Identities=47% Similarity=0.751 Sum_probs=309.6
Q ss_pred HHHhcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHhC-CC
Q 014492 68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSG-LE 145 (423)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Y~~~g~~~lr~~ia~~~g-~~ 145 (423)
++.+.++.+|.++ ++..|.+ ++++|++|+||++++|.+.+++.+ ....++||++...++++++++++| ++
T Consensus 3 ~~~i~~l~~y~~~------~~~~g~~--~~i~LssNenP~gp~~~~~~~~~~~~~~~~rYPd~~~~~l~~a~a~~~~~~~ 74 (356)
T COG0079 3 RPLVRDLPPYVPG------ARQYGLP--GIIKLSSNENPYGPPPKVIEAIRAALDKLNRYPDPDYRELRAALAEYYGVVD 74 (356)
T ss_pred chhhhhccCCCCc------ccccCCc--cceeecCCCCCCCCCHHHHHHHHHHHHhhccCCCCcHHHHHHHHHHHhCCCC
Confidence 4556677777653 2333443 689999999999999999988877 344589999999999999999999 88
Q ss_pred CCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEc
Q 014492 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT 225 (423)
Q Consensus 146 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~ 225 (423)
+++|++++|+++.|..++++++.+||+|+++.|+|..|...++..|++++.+|..+ |.+|++.+.+.+.+ ++++|++|
T Consensus 75 ~~~V~~gnGsde~i~~l~~~~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~-~~~d~~~~~~~~~~-~~~lv~i~ 152 (356)
T COG0079 75 PENVLVGNGSDELIELLVRAFVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKE-FRLDLDAILAAIRD-KTKLVFLC 152 (356)
T ss_pred cceEEEcCChHHHHHHHHHHhhcCCCEEEEcCCChHHHHHHHHhcCCeEEEecccc-cccCHHHHHHhhhc-CCCEEEEe
Confidence 89999999999999999999999999999999999999999999999999999877 99999999999984 89999999
Q ss_pred CCCCCcCcCCCHHHHHHHHcC---CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHH
Q 014492 226 SPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII 302 (423)
Q Consensus 226 ~p~NPtG~~~~~~~l~~i~~~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~ 302 (423)
|||||||..++.++++++++. +.+||+||+|.+|.. .+....+..++|+++++||||+||++|+|+||++++++++
T Consensus 153 nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~eF~~-~~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~~~~i 231 (356)
T COG0079 153 NPNNPTGTLLPREELRALLEALPEGGLVVIDEAYIEFSP-ESSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIANPELI 231 (356)
T ss_pred CCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhcCC-chhhhhccCCCCEEEEEecHHhhhcchhceeeccCCHHHH
Confidence 999999999999999999986 789999999999997 5555555567889999999999999999999999999999
Q ss_pred HHHHHhcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCe-ecCCCceEEEEEeCCCCCHHHHHH
Q 014492 303 EYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSGMDAKKLKD 381 (423)
Q Consensus 303 ~~l~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~~~~~~~~~~~~~~~l~~ 381 (423)
+.+.+.+.+|++|.+++.++.+++.+.+++++.++.+.+.|+++.+.|++++ +. +.|+.+||++++++... +..+.+
T Consensus 232 ~~l~~vr~p~~v~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~~~-~~~v~pS~aNFvlv~~~~~~-~~~l~~ 309 (356)
T COG0079 232 AALNKVRPPFNVSSPALAAAIAALRDADYLEESVERIREERERLYAALKALG-LFGVFPSQANFVLVRVPDAE-AAALAE 309 (356)
T ss_pred HHHHHhcCCCCCCHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcEEEEECCCcc-HHHHHH
Confidence 9999999999999999999999999999999999999999999999999998 55 88999999999998644 678999
Q ss_pred HHHhCCcEEEeCCC-CCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 382 DLAKMGVMIRHYNN-KELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 382 ~L~~~gI~v~~~~~-~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.|.++||.||.+.. +..++|+||++++.+++++|.++|+.+
T Consensus 310 ~L~~~giivR~~~~~~~~~~~lRitvgt~een~~ll~AL~~~ 351 (356)
T COG0079 310 ALLKKGILVRDCSSVGLLPGYLRITVGTPEENDRLLAALREV 351 (356)
T ss_pred HHHHCCEEEEeCCCCCCCCCeEEEEeCCHHHHHHHHHHHHHH
Confidence 99999999999865 456789999999999999999999864
No 3
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=2.3e-53 Score=413.57 Aligned_cols=341 Identities=32% Similarity=0.533 Sum_probs=296.5
Q ss_pred HHhcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHhCCCCC
Q 014492 69 SHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESD 147 (423)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~g~~~lr~~ia~~~g~~~~ 147 (423)
..+..+.+|.+........+.++ ..++|+|+.|+|++++++.+++++.+. .....||+.|..+||++++++++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~l~~nen~~~~~~~v~~a~~~~~~~~~~Yp~~g~~~Lr~aia~~~~~~~~ 82 (366)
T PRK01533 5 DQLSSLQPYKPGKSPEQMKEVYG--DHSFVKLASNENPFGCSPRVLDELQKSWLDHALYPDGGATTLRQTIANKLHVKME 82 (366)
T ss_pred hhhhcCCCCCCCCChHHHHHhcC--CCceEEeCCCCCCCCCCHHHHHHHHHHHHhcCcCCCCCHHHHHHHHHHHhCCCcc
Confidence 44555666655544444444433 357899999999999999999998763 233568988999999999999999999
Q ss_pred cEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCC
Q 014492 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSP 227 (423)
Q Consensus 148 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p 227 (423)
+|++|+|+++++.+++++++++||.|+++.|+|..|...++..|++++.+|.+ ++.+|++++++.+. ++++++++|||
T Consensus 83 ~I~vt~Gs~e~i~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~-~~~~d~~~l~~~~~-~~~~~v~i~~P 160 (366)
T PRK01533 83 QVLCGSGLDEVIQIISRAVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEVALN-NGVYDLDEISSVVD-NDTKIVWICNP 160 (366)
T ss_pred eEEECCCHHHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecC-CCCcCHHHHHHHhC-cCCcEEEEeCC
Confidence 99999999999999999999999999999999999999999999999999985 45799999999886 68999999999
Q ss_pred CCCcCcCCCHHHHHHHHcC---CCEEEEccCCccccCCC---chhhhhccCCcEEEEccChhhhcccCccccccccCHHH
Q 014492 228 NNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLE---SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI 301 (423)
Q Consensus 228 ~NPtG~~~~~~~l~~i~~~---~~~li~Deay~~~~~~~---~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~ 301 (423)
|||||.+++.+++++|++. +.++|+||+|.+|.+.+ +....+...+++++++||||.||++|+|+||+++++++
T Consensus 161 ~NPTG~~~~~~~l~~l~~~~~~~~~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~~~~ 240 (366)
T PRK01533 161 NNPTGTYVNDRKLTQFIEGISENTLIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHEEL 240 (366)
T ss_pred CCCCCCCcCHHHHHHHHHhCCCCCEEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCCHHH
Confidence 9999999999999999885 56788999999887543 23344445789999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHH
Q 014492 302 IEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKD 381 (423)
Q Consensus 302 ~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~ 381 (423)
++.+.+...++++|.++|.++.++|++.+|.++.++.++++++++.+.|+.++ +.+.+++++|+|++++ ++.++.+
T Consensus 241 ~~~l~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~~~l~~~g-~~~~~~~~nf~~~~~~---~~~~~~~ 316 (366)
T PRK01533 241 IEKLNVVRLPFNVSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFCKENE-IPFYQSQTNFIFLPVE---NGGEIYE 316 (366)
T ss_pred HHHHHHhcCCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCC-CccCCCcCcEEEEeCC---CHHHHHH
Confidence 99999888889999999999999999988999999999999999999998875 5667889999999986 5678999
Q ss_pred HHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 382 DLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 382 ~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.|+++||.|+++ ++++||++++.+++++|.++|+.+
T Consensus 317 ~l~~~GI~Vr~~-----~~~iRis~~~~~~~~~l~~al~~~ 352 (366)
T PRK01533 317 ACAHAGFIIRPF-----PNGVRITVGTREQNEGVISVLQQH 352 (366)
T ss_pred HHHHCCcEEccC-----CCceEEeCCCHHHHHHHHHHHHHH
Confidence 999999999984 478999999999999999999864
No 4
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=5e-53 Score=411.62 Aligned_cols=325 Identities=29% Similarity=0.455 Sum_probs=284.0
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhc-CCCC--CCCCCcchHHHHHHHHHHh----C--CCCCc-EEEeCCHHHHHHHHHH
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDS----G--LESDH-ILVGCGADELIDLIMR 164 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~~--~~Y~~~g~~~lr~~ia~~~----g--~~~~~-i~~t~G~~~al~~~~~ 164 (423)
.++|+|+.|++++++|+.+.+++.+ +..+ +.|+..|.++||+++++++ | +++++ |++|+|+++++..++.
T Consensus 28 ~~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~~ 107 (393)
T COG0436 28 EDVIDLSIGEPDFPTPEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAFL 107 (393)
T ss_pred CCEEEeCCCCCCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHHH
Confidence 6899999999999999999988876 3333 3447779999999999986 3 45655 9999999999999999
Q ss_pred HhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC---CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHH
Q 014492 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL 241 (423)
Q Consensus 165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~---~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~ 241 (423)
++++|||+|++++|.|+.|....+.+|++++.++++ ++|.+|++++++++++ ++|+|++|+||||||.+++.++++
T Consensus 108 a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~-ktk~i~ln~P~NPTGav~~~~~l~ 186 (393)
T COG0436 108 ALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITP-KTKAIILNSPNNPTGAVYSKEELK 186 (393)
T ss_pred HhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCc-cceEEEEeCCCCCcCcCCCHHHHH
Confidence 999999999999999999999999999999999953 4899999999999984 999999999999999999999999
Q ss_pred HHHcC----CCEEEEccCCccccCCCc-hhhhhc--c-CCcEEEEccChhhhcccCccccccccC-HHHHHHHHHhcCC-
Q 014492 242 KILEM----PILVVLDEAYTEFSGLES-RMEWVK--K-HDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP- 311 (423)
Q Consensus 242 ~i~~~----~~~li~Deay~~~~~~~~-~~~~~~--~-~~~~i~i~S~SK~~g~~G~R~G~i~~~-~~~~~~l~~~~~~- 311 (423)
+|++. +++||.||+|.++.+++. +...+. . .+++|+++||||.|+++|||+||++++ +++++.+.+.+..
T Consensus 187 ~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~~~l~~~~~~~~~~~ 266 (393)
T COG0436 187 AIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPPEELIAALRKLKSYL 266 (393)
T ss_pred HHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEeecChHHHHHHHHHHHHhc
Confidence 99886 999999999999998763 333332 2 478999999999999999999999999 8888888866554
Q ss_pred -CCCcHHHHHHHHHHhCCh---HHHHHHHHHHHHHHHHHHHHHccCCCCe-ec-CCCceEEEEEeCCCCCHHHHHHHHH-
Q 014492 312 -YNVSVAAEVAACAALQNP---IYLEKVKEALIKERERLFKLLKDVPFLN-PY-PSYSNFILCEVTSGMDAKKLKDDLA- 384 (423)
Q Consensus 312 -~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~-p~~~~~~~~~~~~~~~~~~l~~~L~- 384 (423)
++.+.+.|.++.++|+.+ ++.+.+++.++++|+.+.+.|.+++++. .. |.+++|+|++++...++.+|+.+|+
T Consensus 267 ~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p~Ga~Y~~~~i~~~~d~~~f~~~Ll~ 346 (393)
T COG0436 267 TSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVKPPEGAFYLFPKIPELLDSEEFAKKLLE 346 (393)
T ss_pred ccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCCCeeEEEEeecCCCCCHHHHHHHHHH
Confidence 578999999999999975 4778888999999999999999988554 45 6799999999987689999999988
Q ss_pred hCCcEEEeCCCCC---CCCeEEEEecChhhHHHHHHHHhhh
Q 014492 385 KMGVMIRHYNNKE---LKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 385 ~~gI~v~~~~~~~---~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
++||.|.||..++ ++++|||+++... +.+.++++++
T Consensus 347 ~~gV~v~PG~~Fg~~~g~~~vRis~~~~~--~~l~~a~~rl 385 (393)
T COG0436 347 EAGVAVVPGSGFGEPPGEGYVRLSLATSE--ETLEEALRRL 385 (393)
T ss_pred hCCEEEecccccCCCCCCCeEEEEEecCH--HHHHHHHHHH
Confidence 7899999998854 4589999999876 7788888876
No 5
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=6.5e-52 Score=401.92 Aligned_cols=337 Identities=31% Similarity=0.541 Sum_probs=292.3
Q ss_pred hhHHHHhcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHhCC
Q 014492 65 SFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGL 144 (423)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y~~~g~~~lr~~ia~~~g~ 144 (423)
.+.+..+..+.+|.+... . .....++|+.|+|++++++.+ ......+||++...+|++++++++|+
T Consensus 7 ~~~~~~~~~~~~~~~~~~-------~--~~~~~~~l~~Nenp~~~~~~~-----~~~~~~~Yp~~~~~~l~~~~a~~~g~ 72 (351)
T PRK01688 7 DLARENVRALTPYQSARR-------L--GGNGDVWLNANEYPTAVEFQL-----TQQTLNRYPECQPKAVIENYAAYAGV 72 (351)
T ss_pred HHhhHHhhcCCCCCCCCc-------c--CCCCceEecCCCCCCCCChhh-----cccccccCCCCChHHHHHHHHHHhCC
Confidence 345667777777754321 1 122359999999999988764 11223679999889999999999999
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhcCCC-CeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEE
Q 014492 145 ESDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIF 223 (423)
Q Consensus 145 ~~~~i~~t~G~~~al~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~ 223 (423)
++++|++|+|+++++.+++++++++| |.|+++.|+|..|...++..|++++.+|.++++.+|++++++.+ .++++|+
T Consensus 73 ~~~~I~~~~Gs~e~i~~~~~~~~~~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~~~~~d~~~l~~~~--~~~~lv~ 150 (351)
T PRK01688 73 KPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVEIRTVPTLDNWQLDLPAIADNL--DGVKVVY 150 (351)
T ss_pred CHHHEEEcCCHHHHHHHHHHHhcCCCCCEEEEcCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHHHHHhc--cCCcEEE
Confidence 99999999999999999999999997 89999999999999999999999999998778899999999987 3799999
Q ss_pred EcCCCCCcCcCCCHHHHHHHHcC---CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHH
Q 014492 224 LTSPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS 300 (423)
Q Consensus 224 l~~p~NPtG~~~~~~~l~~i~~~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~ 300 (423)
+||||||||.+++.+++++|++. +.+||+||+|.+|....+....+..++++++++||||.||++|+|+||++++++
T Consensus 151 l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f~~~~s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~~~ 230 (351)
T PRK01688 151 VCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLANEE 230 (351)
T ss_pred EeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhcCCCCChHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCCHH
Confidence 99999999999999999999875 689999999999985545555566678999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCcHHHHHHHHHHhCCh--HHHHHHHHHHHHHHHHHHHHHccCCCC-eecCCCceEEEEEeCCCCCHH
Q 014492 301 IIEYLWRAKQPYNVSVAAEVAACAALQNP--IYLEKVKEALIKERERLFKLLKDVPFL-NPYPSYSNFILCEVTSGMDAK 377 (423)
Q Consensus 301 ~~~~l~~~~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~p~~~~~~~~~~~~~~~~~ 377 (423)
+++.+.+...+|+++.+++.++..+|.+. +++++.++.++++|+++.+.|++++++ .+.|++++|+|++++ +++
T Consensus 231 ~i~~l~~~~~~~~v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps~~nfi~~~~~---~~~ 307 (351)
T PRK01688 231 VINLLLKVIAPYPLSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVEQVFDSETNYILARFT---ASS 307 (351)
T ss_pred HHHHHHhccCCCCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC---CHH
Confidence 99999998888999999999999999863 678888899999999999999998766 478999999999986 578
Q ss_pred HHHHHHHhCCcEEEeCCC-CCCCCeEEEEecChhhHHHHHHHHh
Q 014492 378 KLKDDLAKMGVMIRHYNN-KELKGYVRVSVGKPEHTDALMECLM 420 (423)
Q Consensus 378 ~l~~~L~~~gI~v~~~~~-~~~~~~iRis~~~~~~~~~l~~al~ 420 (423)
++.+.|.++||.|++++. ++.++|+||++++.++++.|.++|+
T Consensus 308 ~l~~~L~~~gi~vr~~~~~~~~~~~iRis~~~~~e~~~l~~al~ 351 (351)
T PRK01688 308 AVFKSLWDQGIILRDQNKQPGLSNCLRITIGTREECQRVIDALR 351 (351)
T ss_pred HHHHHHHHCCeEEEECCCcCCCCCeEEEeCCCHHHHHHHHHhhC
Confidence 899999999999998765 4567899999999999999988874
No 6
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-51 Score=401.13 Aligned_cols=347 Identities=39% Similarity=0.633 Sum_probs=302.2
Q ss_pred HHhcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHhCCCCC
Q 014492 69 SHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESD 147 (423)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~g~~~lr~~ia~~~g~~~~ 147 (423)
+++..+.++.+...+...+++++.+ ++++|+.|+++++++|.+.+++.+. .....||+.+.+++|++++++++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~l~~n~~~~~~~~~v~~a~~~~~~~~~~~p~~g~~~lr~~ia~~~~~~~~ 82 (359)
T PRK03158 5 EQLNQLSAYQPGKSIEEVKREYGLE--KIVKLASNENPYGPSPKVKEAIAAHLDELALYPDGYAPELRTKVAKHLGVDEE 82 (359)
T ss_pred hhhhccCCCCCCCCHHHHHHhcCCC--ceEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHhCCCHH
Confidence 3445556665545555566666654 7899999999999999999988763 333456888899999999999999999
Q ss_pred cEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCC
Q 014492 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSP 227 (423)
Q Consensus 148 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p 227 (423)
+|++|+|+++++..++++++++||.|++++|+|+.|...++..|++++.+|.+ ++++|++++++.+. ++++++++++|
T Consensus 83 ~i~~t~G~~~~l~~~~~~~~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~d~~~l~~~~~-~~~~~v~i~~p 160 (359)
T PRK03158 83 QLLFGAGLDEVIQMISRALLNPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLK-DGGHDLEAMLKAID-EQTKIVWICNP 160 (359)
T ss_pred HEEECCCHHHHHHHHHHHHhCCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecC-CCCcCHHHHHHhcC-CCCCEEEEeCC
Confidence 99999999999999999999999999999999999999999999999999986 57899999999886 68999999999
Q ss_pred CCCcCcCCCHHHHHHHHcC---CCEEEEccCCccccCCC---chhhhhccCCcEEEEccChhhhcccCccccccccCHHH
Q 014492 228 NNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLE---SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI 301 (423)
Q Consensus 228 ~NPtG~~~~~~~l~~i~~~---~~~li~Deay~~~~~~~---~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~ 301 (423)
|||||.+++.+++.++++. ++++|+||+|.+|.+++ ......+..+++++++||||.||++|+|+||+++++++
T Consensus 161 ~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~ 240 (359)
T PRK03158 161 NNPTGTYVNHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASEEL 240 (359)
T ss_pred CCCCCCCCCHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCHHH
Confidence 9999999999999999975 89999999999987543 22344455789999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHH
Q 014492 302 IEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKD 381 (423)
Q Consensus 302 ~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~ 381 (423)
++.+.+....++.+.++|.++..+|++.+|.++.++.++++++++.+.|++.+ +...|++|+|+|++++ .++.++++
T Consensus 241 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~g~~i~~~~~--~~~~~~~~ 317 (359)
T PRK03158 241 IEKLNIARPPFNTTRIAQYAAIAALEDQAFLKECVEKNAEGLEQYYAFCKEYG-LFYYPSQTNFIFVDTG--RDANELFE 317 (359)
T ss_pred HHHHHHhcCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCC-CeeCCCcCcEEEEECC--CCHHHHHH
Confidence 99999888888999999999999999888999988999999999999998874 5567888999999984 46889999
Q ss_pred HHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 382 DLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 382 ~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.|.++||.++++..++.++++||+++..++++++.++|+++
T Consensus 318 ~l~~~gv~v~~g~~f~~~~~iRi~~~~~~~~~~l~~al~~~ 358 (359)
T PRK03158 318 ALLKKGYIVRSGAALGFPTGVRITIGLKEQNDKIIELLKEL 358 (359)
T ss_pred HHHHCCeEEeeCCCCCCCCeEEEecCCHHHHHHHHHHHHHh
Confidence 99999999999887666789999999999999999999875
No 7
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=6.4e-51 Score=396.41 Aligned_cols=341 Identities=33% Similarity=0.509 Sum_probs=292.0
Q ss_pred hcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHhCCCCCcE
Q 014492 71 LRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHI 149 (423)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i 149 (423)
+....++.++.....+++.++..+.++++|+.|+|+++++|.+.+++.+ .....+||+.+..+||+++++++++++++|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~~~~lr~~ia~~~~~~~~~I 85 (357)
T PRK14809 6 LSDHVAYRAGRGIEEVARELGLDPDDLVKLSSNENPHGPSPAAVEAIREAAERVHSYPKASHADLTAALADRWDVSPEQV 85 (357)
T ss_pred hhcCCCcCCCCCHHHHHHHhCCCccceeEecCCCCCCCCCHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHHhCCCcceE
Confidence 4445555445556677888887778899999999999999999988876 333367888888999999999999999999
Q ss_pred EEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCC
Q 014492 150 LVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSP 227 (423)
Q Consensus 150 ~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p 227 (423)
++|+|+++++.+++++++++||.|++++|+|..|...++..|++++.++.+ +++.+|++++++.. .++|+|++|||
T Consensus 86 ~it~G~~~al~~~~~~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~--~~~k~i~l~~p 163 (357)
T PRK14809 86 WLANGGDGALDYLARAMLDPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAY--DGERIVYLTSP 163 (357)
T ss_pred EECCCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhh--cCCcEEEEeCC
Confidence 999999999999999999999999999999999988888899999988863 45778888887765 36899999999
Q ss_pred CCCcCcCCCHHHHHHHHcC---CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHH
Q 014492 228 NNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY 304 (423)
Q Consensus 228 ~NPtG~~~~~~~l~~i~~~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~ 304 (423)
|||||.+++.+++++|++. +++||+||+|.+|.+.++........+++++++||||.||++|+|+||++++++++++
T Consensus 164 ~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~ 243 (357)
T PRK14809 164 HNPTGSEIPLDEVEALAERTDEETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPEEWADA 243 (357)
T ss_pred CCCCCcCCCHHHHHHHHHhCccCcEEEEechhhhccCCchhHHHHhhCCCEEEEecchhHhcCcchhheeeecCHHHHHH
Confidence 9999999999999999886 7899999999999875544444455689999999999999999999999999999999
Q ss_pred HHHhcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHH
Q 014492 305 LWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA 384 (423)
Q Consensus 305 l~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~ 384 (423)
+.+...+++.+.++|.++..+|.+.+|+++.++.++++++.+.+.|+... .|++|+|+|++++ +..++.+.|.
T Consensus 244 ~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~----~~~~g~f~~~~~~---~~~~~~~~l~ 316 (357)
T PRK14809 244 YARVNTPFAASELACRAGLAALDDDEHVERTVETARWAREYIREELDAPT----WESAGNFVLAEVG---DASAVAEAAQ 316 (357)
T ss_pred HHHhCCCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhcCcc----CCCCCCEEEEECC---CHHHHHHHHH
Confidence 99888788899999999999999888999999999999999999997642 3788999999985 5788999998
Q ss_pred hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHh
Q 014492 385 KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLM 420 (423)
Q Consensus 385 ~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~ 420 (423)
++||.|+++..++.++++||+++..+++++..+.|+
T Consensus 317 ~~gv~v~~g~~f~~~~~iRls~~~~~~~~~~l~~L~ 352 (357)
T PRK14809 317 ERGVIVRDCTSFGLPECIRITCGTREETERAVEVLN 352 (357)
T ss_pred HCCEEEEECccCCCCCeEEEecCCHHHHHHHHHHHH
Confidence 999999999877667899999987655444444443
No 8
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.4e-50 Score=392.34 Aligned_cols=350 Identities=36% Similarity=0.632 Sum_probs=300.8
Q ss_pred HHHHhcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHhCCC
Q 014492 67 IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLE 145 (423)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~g~~~lr~~ia~~~g~~ 145 (423)
++.++..+.++.+...+...+..++ +.++++|+.|+|++++++.+.+++.+. .....|+++...+||++++++++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~l~~~~~~~~~~~~~~~al~~~~~~~~~Y~~~~g~~lr~~ia~~~~~~ 87 (371)
T PRK05166 10 ARAEVRPLPPYNAGLTIEEVRARYG--VPRIAKLGSNENPLGPSPAVRRAFADIAELLRLYPDPQGRALREAIAARTGVP 87 (371)
T ss_pred hhHHHhcCCCCCCCCCHHHHHHhcC--CcceEEcCCCCCCCCCCHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHhCcC
Confidence 4456667777766666665555554 357899999999999999999988763 2335788765469999999999999
Q ss_pred CCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEc
Q 014492 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT 225 (423)
Q Consensus 146 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~ 225 (423)
+++|++|+|+++++..++.+++++||.|+++.|+|..+...++..|++++.++.+.++++|++++++.++ .++++++++
T Consensus 88 ~~~i~~t~G~~~~l~~~~~~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~-~~~~~v~l~ 166 (371)
T PRK05166 88 ADRIILGNGSEDLIAVICRAVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTVTPDLGFDLDALCAAVA-RAPRMLMFS 166 (371)
T ss_pred HHHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHhhh-cCCCEEEEe
Confidence 9999999999999999999999999999999999999999999999999999987778999999999986 588999999
Q ss_pred CCCCCcCcCCCHHHHHHHHcC---CCEEEEccCCccccCCC---chhhhhc-cCCcEEEEccChhhhcccCcccccccc-
Q 014492 226 SPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLE---SRMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAF- 297 (423)
Q Consensus 226 ~p~NPtG~~~~~~~l~~i~~~---~~~li~Deay~~~~~~~---~~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~- 297 (423)
|||||||.+++.+++++|++. +++||+||+|.+|.++. +...... ..+++++++||||.||++|+|+||+++
T Consensus 167 ~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~ 246 (371)
T PRK05166 167 NPSNPVGSWLTADQLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVS 246 (371)
T ss_pred CCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecC
Confidence 999999999999999999885 78999999999988543 2222222 346899999999999999999999775
Q ss_pred CHHHHHHHHHhcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHH
Q 014492 298 PLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAK 377 (423)
Q Consensus 298 ~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~ 377 (423)
++++++.+.+....++++.++|.++..++.+.+|+++.++.++++++++.+.|++.+ +.+.|++|+|+|++++ .++.
T Consensus 247 ~~~l~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~p~~g~fl~~~~~--~~~~ 323 (371)
T PRK05166 247 DPELVGLLDRVRTPFNVNGAAQAAALAALDDEEHLAKGVALALAERERLKKELAEMG-YRIAPSRANFLFFDAR--RPAS 323 (371)
T ss_pred CHHHHHHHHHhccCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCc-CeeCCCcCCEEEEeCC--CCHH
Confidence 788888888877778899999999999998888999999999999999999999885 4567888999999975 3678
Q ss_pred HHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 378 KLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 378 ~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
++.+.|.++||.++++..++.++++||+++..+++++|.++|+++
T Consensus 324 ~l~~~l~~~gi~v~p~~~~~~~~~iRi~~~~~~~~~~l~~~l~~i 368 (371)
T PRK05166 324 AVAEALLRQGVIVKPWKQPGFETFIRVSIGSPEENDHFVAALDKV 368 (371)
T ss_pred HHHHHHHHCCeEEecCCCCCCCCeEEEEcCCHHHHHHHHHHHHHH
Confidence 899999999999999876666899999999988899999999876
No 9
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=100.00 E-value=9.8e-50 Score=388.42 Aligned_cols=335 Identities=30% Similarity=0.446 Sum_probs=285.9
Q ss_pred hHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492 83 FEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (423)
Q Consensus 83 ~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~ 161 (423)
....+...+....++++|+.|+|++++++.+.+++.+ +.....||+++..+||+++|+++++++++|++|+|+++++.+
T Consensus 10 ~~~~~~~~~~~~~~~i~l~~~~n~~~~~~~~~~a~~~~~~~~~~Y~~~~~~~Lr~aia~~~~v~~~~I~it~G~~~~i~~ 89 (360)
T PRK07392 10 LAWAAAIAGCPPDAILDFSASINPLGPPESVIAAIQSALSALRHYPDPDYRELRLALAQHHQLPPEWILPGNGAAELLTW 89 (360)
T ss_pred HHHHHHHcCCCcccEEEeCCcCCCCCCCHHHHHHHHHHHHHhhcCCCcCHHHHHHHHHHHhCcChhhEEECCCHHHHHHH
Confidence 3444556677777899999999999999999998876 333467887777899999999999999999999999999999
Q ss_pred HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCC-----CCHHHHHHHhhcCCceEEEEcCCCCCcCcCCC
Q 014492 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFS-----LNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236 (423)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~-----~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~ 236 (423)
+++.+. +||.|+++.|+|..|...++..|++++.+|.+.++. .|++++++.. .+++++++||||||||.+++
T Consensus 90 ~~~~l~-~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~nP~NPTG~~~~ 166 (360)
T PRK07392 90 AGRELA-QLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL--TPNDGLLLNNPHNPTGKLWS 166 (360)
T ss_pred HHHHhC-CCCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc--cCCCEEEEeCCCCCCCCCcC
Confidence 999764 688999999999999999999999999999754333 4677776654 46899999999999999999
Q ss_pred HHHHHHHHcCCCEEEEccCCccccCCCc---hhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCC
Q 014492 237 DEDLLKILEMPILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN 313 (423)
Q Consensus 237 ~~~l~~i~~~~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~ 313 (423)
.+++.++++...++|+||+|.+|.+++. ....++..+++++++||||.||++|+|+||+++++++++.+.+....++
T Consensus 167 ~~~l~~l~~~~~~~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~~~~~~~~~~~~~~~ 246 (360)
T PRK07392 167 REAILPLLEQFALVVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHPDRLQRWQQWRDPWP 246 (360)
T ss_pred HHHHHHHHHHCCEEEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCHHHHHHHHhhCCCCC
Confidence 9999999988335777999999976432 2333455679999999999999999999999999999999888777789
Q ss_pred CcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHH-hCCcEEEe
Q 014492 314 VSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-KMGVMIRH 392 (423)
Q Consensus 314 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~-~~gI~v~~ 392 (423)
++.++|.++..+|++.+|.+..++.++++++++.+.|++++++.+.+++++|+|++++. ++.++.+.+. ++||.+++
T Consensus 247 ~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~fl~~~~~~--~~~~l~~~ll~~~gv~v~p 324 (360)
T PRK07392 247 VNGLAAAAAIAALADRDFQQQTWAWLPPAREALFQGLASLPGLTPLPSAANFLLVQSQG--SALQLQEKLLQQHRILIRD 324 (360)
T ss_pred CCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCCcEECCCCCCEEEEEcCC--CHHHHHHHHHhhCCEEEEe
Confidence 99999999999999888888888889999999999999887777778889999999863 6788988865 78999999
Q ss_pred CCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014492 393 YNNKE--LKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 393 ~~~~~--~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
+..++ .++|+||+++..+++++|.++++++
T Consensus 325 g~~f~~~~~~~iRi~~~~~~~~~~l~~al~~~ 356 (360)
T PRK07392 325 CLSFPELGDRYFRVAVRTEAENQRLLEALAAI 356 (360)
T ss_pred CCCCCCCCCCEEEEEeCCHHHHHHHHHHHHHH
Confidence 88643 3579999999988789999999875
No 10
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=7.9e-50 Score=388.71 Aligned_cols=323 Identities=38% Similarity=0.619 Sum_probs=288.0
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhc-CCC--CCCCCCcchHHHHHHHHHHhCCCC-CcEEEeCCHHHHHHHHHHHhcCCC
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQ-LKF--PYIYPDPESRRLRAALAKDSGLES-DHILVGCGADELIDLIMRCVLDPG 170 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~--~~~Y~~~g~~~lr~~ia~~~g~~~-~~i~~t~G~~~al~~~~~~l~~~g 170 (423)
.++++|+.|+|++++++.+++++.+ +.. ..+||+++..+||+++++++++++ ++|++|+|+++++..++++++++|
T Consensus 26 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~~~~~~~~~g 105 (356)
T PRK04870 26 TGMVKLDAMENPYRLPAELRAELGERLAEVALNRYPDPRAAALKAALRAAMGVPAGADVLLGNGSDELIQLLALACAKPG 105 (356)
T ss_pred CCceeCcCCCCCCCCCHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHHHHHHHHhcCCC
Confidence 5789999999999999999999986 322 367888888999999999999865 489999999999999999999999
Q ss_pred CeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCE
Q 014492 171 DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PIL 249 (423)
Q Consensus 171 d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~ 249 (423)
|+|+++.|+|..|...++..|++++.+|.++++.+|++++++.+.+.++++|++|+||||||.+++.+++++|++. +.+
T Consensus 106 d~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~~~~~ 185 (356)
T PRK04870 106 ATVLAPEPGFVMYRMSAKLAGLEFVGVPLTADFTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFDDADVERIIEAAPGL 185 (356)
T ss_pred CEEEECCCCHHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCCHHHHHHHHHHCCCE
Confidence 9999999999999999999999999999887889999999999975689999999999999999999999999988 889
Q ss_pred EEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCcHHHHHHHHHHhCCh
Q 014492 250 VVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNP 329 (423)
Q Consensus 250 li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~ 329 (423)
+|+||+|.+|.+.. ....+...+++++++|||| ++++|+|+||+++++++++.+......++++.++|.++..++++.
T Consensus 186 ii~De~y~~~~~~~-~~~~~~~~~~vi~~~S~SK-~~~~GlRiG~~i~~~~~i~~~~~~~~~~~~~~~~q~~a~~~l~~~ 263 (356)
T PRK04870 186 VVVDEAYQPFAGDS-WLPRLARFPNLLVMRTVSK-LGLAGLRLGYLAGHPAWIAELDKVRPPYNVNVLTQATALFALEHV 263 (356)
T ss_pred EEEECCchhhcCcc-hHHHHhhCCCEEEEecchh-hhhHHHhhhhhhCCHHHHHHHHHccCCCcCCHHHHHHHHHHHhCH
Confidence 99999999887532 2233455678999999999 899999999999999999999888777899999999999999887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC--CCCCeEEEEec
Q 014492 330 IYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK--ELKGYVRVSVG 407 (423)
Q Consensus 330 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~--~~~~~iRis~~ 407 (423)
+++++.+++++++++.+.+.|++++++.+.|.+++|+|++++ +..++.+.|.++||.|+++..+ ..++++||+++
T Consensus 264 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~ 340 (356)
T PRK04870 264 DVLDAQAAQLRAERTRLAAALAALPGVTVFPSAANFILVRVP---DAAAVFDGLKTRGVLVKNLSGMHPLLANCLRVTVG 340 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCcEECCCCCeEEEEECC---CHHHHHHHHHHCCEEEEECCCCCCCCCCeEEEeCC
Confidence 778888999999999999999988666777889999999986 5678999999999999987653 34789999999
Q ss_pred ChhhHHHHHHHHhhh
Q 014492 408 KPEHTDALMECLMHL 422 (423)
Q Consensus 408 ~~~~~~~l~~al~~l 422 (423)
+.+++++|.++|+.+
T Consensus 341 ~~~~~~~l~~al~~~ 355 (356)
T PRK04870 341 TPEENAQFLAALKAA 355 (356)
T ss_pred CHHHHHHHHHHHHHh
Confidence 999999999999875
No 11
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2e-49 Score=384.77 Aligned_cols=322 Identities=39% Similarity=0.641 Sum_probs=284.1
Q ss_pred CeeEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCe
Q 014492 96 DIVKIDANENPYGPPPEVREALGQL-K--FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK 172 (423)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~ 172 (423)
..++|+.|++++++++.+.+++.+. . ...+|++++..++|+++++++++++++|++|+|+++++..++..++++||+
T Consensus 23 ~~~~l~~~~~~~~~p~~~~~a~~~~~~~~~~~~y~~~~~~~lr~~ia~~~~~~~~~i~it~G~~~~l~~~~~~l~~~gd~ 102 (351)
T PRK14807 23 YKYKMDANETPFELPEEVIKNIQEIVKSSQVNIYPDPTAEKLREELARYCSVVPTNIFVGNGSDEIIHLIMLAFINKGDV 102 (351)
T ss_pred ceeEccCCCCCCCCCHHHHHHHHHHhhcCcccCCCCccHHHHHHHHHHHhCCCcccEEEecCHHHHHHHHHHHhcCCCCE
Confidence 3589999999999999999998762 2 235688777889999999999999999999999999999999999999999
Q ss_pred EEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEE
Q 014492 173 IVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVV 251 (423)
Q Consensus 173 Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li 251 (423)
|+++.|+|..+...++..|++++.++.++++++|++++++.+.+.++|+|+++|||||||.+++.+++.++++. +.++|
T Consensus 103 Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~i 182 (351)
T PRK14807 103 VIYPHPSFAMYSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIEREDIIKIIEKSRGIVV 182 (351)
T ss_pred EEEeCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEE
Confidence 99999999999999999999999999877789999999999975589999999999999999999999999987 78899
Q ss_pred EccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCcHHHHHHHHHHhCChHH
Q 014492 252 LDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIY 331 (423)
Q Consensus 252 ~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~ 331 (423)
+||+|.+|. +..........+++++++||||.||++|+|+||+++++++++.+...+..++++.++|.++..++++ .+
T Consensus 183 vDe~y~~~~-~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~ 260 (351)
T PRK14807 183 VDEAYFEFY-GNTIVDVINEFENLIVLRTLSKAFGLAGLRVGYAVANENILKYLNLVKSPYNINSLSQVIALKVLRT-GV 260 (351)
T ss_pred EeCcchhhc-ccchHHHhhhCCCEEEEecchHhcccchhceeeeecCHHHHHHHHHccCCCCcCHHHHHHHHHHHhH-HH
Confidence 999999875 3333333445689999999999999999999999999999999988877888999999999999986 46
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC-CCCCCeEEEEecChh
Q 014492 332 LEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN-KELKGYVRVSVGKPE 410 (423)
Q Consensus 332 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~-~~~~~~iRis~~~~~ 410 (423)
+++..+.++++++++.+.|++++++.+.|++|+|+|++++ +.+++++.|.++||.|+++.. ...++++||+++..+
T Consensus 261 ~~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~i~~~---~~~~~~~~l~~~gV~v~~~~~~~~~~~~iRis~~~~~ 337 (351)
T PRK14807 261 LKERVNYILNERERLIKELSKIPGIKVYPSKTNFILVKFK---DADYVYQGLLERGILVRDFSKVEGLEGALRITVSSCE 337 (351)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcEECcCCccEEEEEcC---CHHHHHHHHHHCCEEEEECCCCCCCCCeEEEEcCCHH
Confidence 7777788889999999999887666777888999999996 578889999999999998754 455789999999999
Q ss_pred hHHHHHHHHhhh
Q 014492 411 HTDALMECLMHL 422 (423)
Q Consensus 411 ~~~~l~~al~~l 422 (423)
++++|.++|+++
T Consensus 338 ~~~~l~~~l~~~ 349 (351)
T PRK14807 338 ANDYLINGLKEL 349 (351)
T ss_pred HHHHHHHHHHHh
Confidence 999999999875
No 12
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1e-49 Score=389.93 Aligned_cols=318 Identities=33% Similarity=0.553 Sum_probs=270.7
Q ss_pred CeeEcCCCCCCCCCCHHHHHHHhcC-CC---CCCCCCcchHHHHHHHHHHhC--------CCCCcEEEeCCHHHHHHHHH
Q 014492 96 DIVKIDANENPYGPPPEVREALGQL-KF---PYIYPDPESRRLRAALAKDSG--------LESDHILVGCGADELIDLIM 163 (423)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~-~~---~~~Y~~~g~~~lr~~ia~~~g--------~~~~~i~~t~G~~~al~~~~ 163 (423)
.+++|+.|++++++++.+.+++.+. .. ..+||+.|..+||++++++++ +++++|++|+|+++++..++
T Consensus 29 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~al~~~~ 108 (374)
T PRK02610 29 QLDRLDTNEFPYDLPPDLKQKLAWLYQQGIESNRYPDGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDELIRSLL 108 (374)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhcccccCCCCCchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHHHHHHH
Confidence 4799999999999999999998762 22 256888889999999999986 78899999999999999888
Q ss_pred HHhcCCCC-eEEEcCCCchhhHHHHHHCCCeEEEecCCC-CCCCCHHHHHHHhhc---CCceEEEEcCCCCCcCcCCCHH
Q 014492 164 RCVLDPGD-KIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDE 238 (423)
Q Consensus 164 ~~l~~~gd-~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~~ 238 (423)
.+++.+|| .|+++.|+|..|...++..|++++.++.++ ++++|++++++.+.+ .++|+|++||||||||.+++.+
T Consensus 109 ~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~s~~ 188 (374)
T PRK02610 109 IATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRVGRDPETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPLTAA 188 (374)
T ss_pred HHHcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEecCCcccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCCCCCCHH
Confidence 88888886 899999999999999999999999999754 589999999998864 5899999999999999999999
Q ss_pred HHHHHHcC--CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCcH
Q 014492 239 DLLKILEM--PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSV 316 (423)
Q Consensus 239 ~l~~i~~~--~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~ 316 (423)
+++++++. +++||+||+|.+|.+. .....+...+++|+++||||.||++|+|+||+++++++++.+.+.+..++++.
T Consensus 189 ~l~~l~~~~~~~~iI~De~Y~~~~~~-~~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~v~~~~l~~~l~~~~~~~~~~~ 267 (374)
T PRK02610 189 ELEWLRSLPEDILVVIDEAYFEFSQT-TLVGELAQHPNWVILRTFSKAFRLAAHRVGYAIGHPELIAVLEKVRLPYNLPS 267 (374)
T ss_pred HHHHHHhccCCcEEEEeccccccCcc-chHHHHhcCCCEEEEEecchhccCcccceeeeecCHHHHHHHHHhcCCCCCCH
Confidence 99999876 8999999999998653 23334445678999999999999999999999999999999998887889999
Q ss_pred HHHHHHHHHhCChHH-HHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC
Q 014492 317 AAEVAACAALQNPIY-LEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN 395 (423)
Q Consensus 317 ~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~ 395 (423)
++|.++..++++.++ .+.+++. .+.++.+.+.|++++++.+.|++|+|+|++++++.+..++++.|.++||.|+++
T Consensus 268 ~~q~a~~~~l~~~~~~~~~~~~~-~~~r~~l~~~L~~~~~~~~~p~~g~f~~~~l~~~~~~~~~~~~l~~~gi~v~~~-- 344 (374)
T PRK02610 268 FSQLAAQLALEHRQELLAAIPEI-LQERDRLYQALQELPQLRVWPSAANFLYLRLSQDAALAALHQALKAQGTLVRHT-- 344 (374)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHH-HHHHHHHHHHHHhCCCcEeCCCcceEEEEeCCCCCCHHHHHHHHHHCCEEEEeC--
Confidence 999999999988544 4444444 455788889998876666679999999999987778899999999999999864
Q ss_pred CCCCCeEEEEecChhhHHHHHHHHh
Q 014492 396 KELKGYVRVSVGKPEHTDALMECLM 420 (423)
Q Consensus 396 ~~~~~~iRis~~~~~~~~~l~~al~ 420 (423)
++++||+++..+++++..+.|+
T Consensus 345 ---~~~lRls~~~~~~~~~~l~~l~ 366 (374)
T PRK02610 345 ---GGGLRITIGTPEENQRTLERLQ 366 (374)
T ss_pred ---CCeEEEeCCCHHHHHHHHHHHH
Confidence 4799999998655444444443
No 13
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-49 Score=386.86 Aligned_cols=318 Identities=35% Similarity=0.542 Sum_probs=278.5
Q ss_pred CeeEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCC-CeEE
Q 014492 96 DIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPG-DKIV 174 (423)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~g-d~Vl 174 (423)
..++++.|++++++++... ....+||+++..+||+++++++++++++|++|+|+++++.+++++++.+| |.|+
T Consensus 32 ~~~~~~~ne~~~~~~~~~~------~~~~~Y~~~~~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~~~~g~~~vl 105 (364)
T PRK04781 32 GDVWLNANESAWANPADPD------ASTRRYPDPQPPGLRSALAALYGCAPEQLLIGRGSDEAIDLLVRALCVPGRDAVL 105 (364)
T ss_pred CCEEeeCCCCCCCCChhhc------chhccCCCCCHHHHHHHHHHHhCcChHHEEEeCCHHHHHHHHHHHhcCCCCCeEE
Confidence 4589999999998876421 12367888888999999999999999999999999999999999999999 7999
Q ss_pred EcCCCchhhHHHHHHCCCeEEEecCC---CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC---CC
Q 014492 175 DCPPTFTMYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PI 248 (423)
Q Consensus 175 ~~~p~y~~~~~~~~~~g~~~~~v~~~---~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~---~~ 248 (423)
+++|+|..|...++..|++++.+|.+ +++.+|++++++.+.+.++++|++||||||||.+++.++++++++. ++
T Consensus 106 v~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~ 185 (364)
T PRK04781 106 VTPPVFGMYAVCARLQNAPLVEVPLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKA 185 (364)
T ss_pred EcCCChHHHHHHHHHcCCEEEEEecCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCc
Confidence 99999999999889999999999963 2466799998776644789999999999999999999999999885 78
Q ss_pred EEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCcHHHHHHHHHHhCC
Q 014492 249 LVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQN 328 (423)
Q Consensus 249 ~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~ 328 (423)
+||+||+|.+|.+.++.....+..+++++++||||.||++|+|+||+++++++++.+.+.+.+++++.++|.++..+|++
T Consensus 186 ~iI~Deay~~f~~~~~~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~~~l~~~l~~~~~~~~~~~~~~~~a~~~l~~ 265 (364)
T PRK04781 186 LVVVDEAYGEFSDVPSAVGLLARYDNLAVLRTLSKAHALAAARIGSLIANAELIAVLRRCQAPYPVPTPCAALAEQALSA 265 (364)
T ss_pred EEEEeCcchhhcCCcchHHHHhhCCCEEEEecChhhcccccceeeeeeCCHHHHHHHHhccCCCCCCHHHHHHHHHHHhc
Confidence 99999999999865555555566789999999999999999999999999999999999988999999999999999987
Q ss_pred h--HHHHHHHHHHHHHHHHHHHHHccCCCC-eecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC-CCCCCeEEE
Q 014492 329 P--IYLEKVKEALIKERERLFKLLKDVPFL-NPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN-KELKGYVRV 404 (423)
Q Consensus 329 ~--~~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~-~~~~~~iRi 404 (423)
. ++..+..+.++++|+.+.+.|++++++ .+.|++|+|+|++++ +..++.+.|.++||.|+++.. ++.++|+||
T Consensus 266 ~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~---~~~~~~~~l~~~gI~v~~~~~~~~~~~~~Ri 342 (364)
T PRK04781 266 PALAVTARRVAEVRAERERLHAALAQLPGVRRVYPSQGNFLLVRFD---DAEAAFQALLAAGVVVRDQRAAPRLSDALRI 342 (364)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC---CHHHHHHHHHHCCeEEeeCCCCCCCCCeEEE
Confidence 5 456666778899999999999988555 468999999999996 568899999999999999875 455789999
Q ss_pred EecChhhHHHHHHHHhhh
Q 014492 405 SVGKPEHTDALMECLMHL 422 (423)
Q Consensus 405 s~~~~~~~~~l~~al~~l 422 (423)
+++.++++++|.++|+.+
T Consensus 343 s~~~~~~~~~l~~al~~~ 360 (364)
T PRK04781 343 TLGTPEQNDRVLAALQRT 360 (364)
T ss_pred eCCCHHHHHHHHHHHHHH
Confidence 999999999999999876
No 14
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-49 Score=386.79 Aligned_cols=316 Identities=30% Similarity=0.465 Sum_probs=277.0
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCC-CeE
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPG-DKI 173 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~g-d~V 173 (423)
.+.++|+.|+|++++++.+ ......+||+++..+||+++|+++|+++++|++|+|+++++.+++++++++| |.|
T Consensus 31 ~~~~~l~~ne~~~~~~~~~-----~~~~~~~Yp~~~~~~Lr~aia~~~~~~~~~I~it~Gs~~~i~~~~~~~~~~g~d~v 105 (354)
T PRK04635 31 RGDIWINANESPFNNEYKL-----DLARLNRYPECQPPELINAYSAYAGVAPEQILTSRGADEAIELLIRAFCEPGQDSI 105 (354)
T ss_pred CCcEEeeCCCCCCCCChhh-----hhHHhccCCCCCHHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHHhcCCCCCeE
Confidence 4569999999999988754 1112367998888999999999999999999999999999999999999998 899
Q ss_pred EEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC--CCEEE
Q 014492 174 VDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM--PILVV 251 (423)
Q Consensus 174 l~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~--~~~li 251 (423)
+++.|+|..|...++..|++++.+|.++++.+|++.++. + .++|+|++||||||||.+++.+++++|++. +++||
T Consensus 106 lv~~P~y~~y~~~~~~~g~~v~~v~~~~~~~~~~~~l~~-~--~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vi 182 (354)
T PRK04635 106 ACFGPTYGMYAISAETFNVGVKALPLTADYQLPLDYIEQ-L--DGAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVV 182 (354)
T ss_pred EEcCCChHHHHHHHHHcCCEEEEEecCCCCCCCHHHHHh-c--cCCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEE
Confidence 999999999999999999999999987778999999873 3 489999999999999999999999999986 79999
Q ss_pred EccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCcHHHHHHHHHHhCCh--
Q 014492 252 LDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNP-- 329 (423)
Q Consensus 252 ~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~-- 329 (423)
+||+|.+|....+........+++++++||||.||++|+|+||+++++++++.+.+...+++.+.+.|.++.++|.+.
T Consensus 183 vDeay~~~~~~~s~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~~~~~~~l~~~~~~~~~~~~~~~~a~~~l~~~~~ 262 (354)
T PRK04635 183 VDEAYIEFCPEYSVADLLASYPNLVVLRTLSKAFALAGARCGFTLANEELIEILMRVIAPYPVPLPVSEIATQALSEAGL 262 (354)
T ss_pred EeCchHhhccCcchHHHHhhCCCEEEEechHHHhhhhHHHHhhhhCCHHHHHHHHhhcCCCCCCHHHHHHHHHHHhcccH
Confidence 999999987544444444557899999999999999999999999999999999887778889999999999999763
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecCh
Q 014492 330 IYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKP 409 (423)
Q Consensus 330 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~ 409 (423)
+++++.++.++++++++.+.|++++++.+.|++|+|+|++++ +..++.+.|.++||.++.++.+..++++|||+++.
T Consensus 263 ~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g~f~~~~~~---~~~~~~~~l~~~gv~v~~~~~~~~~~~lRis~~~~ 339 (354)
T PRK04635 263 ARMKFQVLDLNAQGARLQAALSMYGGAKVLEGNGNYVLAKFD---DVDAVFKALWDAGIVARAYKDPRLANCIRFSFSNR 339 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCceECCCCCcEEEEECC---CHHHHHHHHHHCCEEEEECCCCCCCCeEEEEeCCH
Confidence 567777888999999999999998766677888999999986 57788888889999999876555678999999999
Q ss_pred hhHHHHHHHHhh
Q 014492 410 EHTDALMECLMH 421 (423)
Q Consensus 410 ~~~~~l~~al~~ 421 (423)
++++.|.++|++
T Consensus 340 e~~~~l~~al~~ 351 (354)
T PRK04635 340 AETDKLIGLIRN 351 (354)
T ss_pred HHHHHHHHHHHH
Confidence 999999999875
No 15
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=3.1e-49 Score=385.49 Aligned_cols=350 Identities=43% Similarity=0.696 Sum_probs=304.3
Q ss_pred hHHHHhcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHhCC
Q 014492 66 FIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGL 144 (423)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Y~~~g~~~lr~~ia~~~g~ 144 (423)
.+.+++..+.++.+.+......++++.++.++|+|+.|+|+++++|.+.+++.+ ......||++..+++|+++++++|+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~lr~~ia~~~~~ 84 (361)
T PRK00950 5 KIRAEVKEIKPYVPGKSKEEIAREYGIDPESIIKLGSNENPLGPSPKAVEAIEKELSKIHRYPEPDAPELREALSKYTGV 84 (361)
T ss_pred HHHHHHhcCCCCCCCCCHHHHHHHhCCCccceEEccCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCC
Confidence 345667777777666666667788887777899999999999999999888876 3333668887779999999999999
Q ss_pred CCCcEEE-eCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEE
Q 014492 145 ESDHILV-GCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIF 223 (423)
Q Consensus 145 ~~~~i~~-t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~ 223 (423)
++++|++ |+|+++++..+++.++++||.|+++.|+|..+...++..|++++.++.++++.+|++++++.+. .++++++
T Consensus 85 ~~~~i~~~~~Ga~~~i~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~ 163 (361)
T PRK00950 85 PVENIIVGGDGMDEVIDTLMRTFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYAKREEDFSLDVDSVLNAIT-EKTKVIF 163 (361)
T ss_pred CHHHEEEeCCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCCCcCHHHHHHHhc-cCCCEEE
Confidence 9999999 8999999999999899999999999999999998889999999999977778999999999986 5899999
Q ss_pred EcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHH
Q 014492 224 LTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII 302 (423)
Q Consensus 224 l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~ 302 (423)
+++|+||||.+++.+++.++++. |+++|+||+|.+|.. ..........+++++++||||.||++|+|+||++++++++
T Consensus 164 ~~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~~~~-~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~~ 242 (361)
T PRK00950 164 LCTPNNPTGNLIPEEDIRKILESTDALVFVDEAYVEFAE-YDYTPLALEYDNLIIGRTFSKVFGLAGLRIGYGFVPEWLI 242 (361)
T ss_pred EeCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhhhCc-cchHHHHHhcCCEEEEEeehHhhcCchhhcchhcCCHHHH
Confidence 99999999999999999999987 999999999998863 2333334456789999999999999999999999999999
Q ss_pred HHHHHhcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHH
Q 014492 303 EYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDD 382 (423)
Q Consensus 303 ~~l~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~ 382 (423)
+.+.+...+++.+.++|.++..++++.+++++.+++++++++++.+.|+ +.+.|++++|+|++++ +.++.++++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~l~----~~~~~~~~~~i~~~~~-~~~~~~~~~~ 317 (361)
T PRK00950 243 DYYMRAKTPFSLTRLSQAAAIAALSDKEYIEKSIEHGIKSREYLYNELP----FKVYPSEANFVLVDVT-PMTAKEFCEE 317 (361)
T ss_pred HHHHHhcCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhhcC----eeECCCcceEEEEECC-CCCHHHHHHH
Confidence 9999888888899999999999999888889999999999999988886 3456788999999994 6789999999
Q ss_pred HHhCCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 383 LAKMGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 383 L~~~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
|.++||.++++..+ ..++++||++++.++++++.++|+++
T Consensus 318 l~~~gv~v~~~~~f~~~~~~~lRis~~~~~~~~~l~~~L~~i 359 (361)
T PRK00950 318 LLKRGVIVRDCTSFRGLGDYYIRVSIGTFEENERFLEILKEI 359 (361)
T ss_pred HHHCCEEEeeCCccCCCCCCeEEEECCCHHHHHHHHHHHHHH
Confidence 99999999987653 23679999999988899999999864
No 16
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2e-49 Score=387.03 Aligned_cols=325 Identities=32% Similarity=0.507 Sum_probs=284.0
Q ss_pred CeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEE
Q 014492 96 DIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIV 174 (423)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl 174 (423)
.+++|+.|++++++++.+.+++.+. ....+|++++..+||+++|+++++++++|++|+|+++++..++..++++||.|+
T Consensus 33 ~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~Y~~~~~~~Lr~~ia~~~~~~~~~I~it~G~~~~l~~~~~~~~~~gd~vl 112 (369)
T PRK08153 33 FRARIGANESGFGPSPSVIAAMREAAAEIWKYGDPENHDLRHALAAHHGVAPENIMVGEGIDGLLGLIVRLYVEPGDPVV 112 (369)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEE
Confidence 4579999999999999999998763 223568877788999999999999999999999999999999999999999999
Q ss_pred EcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC---CCEEE
Q 014492 175 DCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PILVV 251 (423)
Q Consensus 175 ~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~---~~~li 251 (423)
++.|+|+.+...++..|++++.+|.+++ .+|++++++.+...+++++++|+||||||.+++.+++.+|++. +++||
T Consensus 113 v~~p~y~~~~~~~~~~g~~~~~vp~~~~-~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI 191 (369)
T PRK08153 113 TSLGAYPTFNYHVAGFGGRLVTVPYRDD-REDLDALLDAARRENAPLVYLANPDNPMGSWHPAADIVAFIEALPETTLLV 191 (369)
T ss_pred ECCCcchHHHHHHHHcCCeEEEeeCCCC-CCCHHHHHHHhcccCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEE
Confidence 9999999999888899999999997544 6899999887765789999999999999999999999999875 89999
Q ss_pred EccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCcHHHHHHHHHHhCChHH
Q 014492 252 LDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIY 331 (423)
Q Consensus 252 ~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~ 331 (423)
+||+|.++.+++.........+++++++||||.||++|+|+||+++++++++.+.+....++++.++|.++..+|++++|
T Consensus 192 ~DE~y~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~~~~~~l~~~~~~~~~s~~~q~~~~~~l~~~~~ 271 (369)
T PRK08153 192 LDEAYCETAPAGAAPPIDTDDPNVIRMRTFSKAYGLAGARVGYAIGAPGTIKAFDKVRNHFGMNRIAQAAALAALKDQAY 271 (369)
T ss_pred EeCchhhhcCcccchhhhhcCCCEEEEecchHhccCcchheeeeecCHHHHHHHHHhhcCCCCCHHHHHHHHHHhcCHHH
Confidence 99999998865433333334678999999999999999999999999999999988888899999999999999998889
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeC-CCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChh
Q 014492 332 LEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVT-SGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPE 410 (423)
Q Consensus 332 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~-~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~ 410 (423)
+++.++.++++++++.+.|++.+. ...|++++|+|++++ +...+.++.+.|.++||.++..+....++++||+++..+
T Consensus 272 ~~~~~~~~~~~r~~~~~~L~~~g~-~~~p~~~~f~~~~~~~~~~~a~~l~~~l~~~Gi~v~~p~~~~~~~~iRis~~~~~ 350 (369)
T PRK08153 272 LAEVVGKIAAARDRIAAIARANGL-TPLPSATNFVAIDCGRDGAFARAVLDGLIARDIFVRMPGVAPLDRCIRVSCGPDE 350 (369)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCC-ccCCCcCcEEEEECCCCcccHHHHHHHHHHCCeEEeeCCCCCCCCeEEEecCCHH
Confidence 999999999999999999998763 456889999999985 245678999999999999963332334679999999999
Q ss_pred hHHHHHHHHhhh
Q 014492 411 HTDALMECLMHL 422 (423)
Q Consensus 411 ~~~~l~~al~~l 422 (423)
+++.+.++++++
T Consensus 351 ~~~~~~~al~~~ 362 (369)
T PRK08153 351 ELDLFAEALPEA 362 (369)
T ss_pred HHHHHHHHHHHH
Confidence 999999998764
No 17
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=2.9e-49 Score=383.79 Aligned_cols=334 Identities=28% Similarity=0.507 Sum_probs=288.6
Q ss_pred chHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHH
Q 014492 82 PFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELID 160 (423)
Q Consensus 82 ~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~ 160 (423)
.+..++++.|....++++|+.|++++++++.+.+++.+. ....+||+++..+||+++++++++++++|++|+|+++++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~a~~~~~~~~~~Y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~ 85 (354)
T PRK06358 6 NINEIAREKGLTKNMILDFSANINPLGVPESLKQAITENLDKLVEYPDPDYLELRKRIASFEQLDLENVILGNGATELIF 85 (354)
T ss_pred cHHHHHHHhCCCccceEEecCCCCCCCCCHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHhCCChhhEEECCCHHHHHH
Confidence 355567778877677899999999999999999998873 3346788888889999999999999999999999999999
Q ss_pred HHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC--CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHH
Q 014492 161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE 238 (423)
Q Consensus 161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~ 238 (423)
.+++.+ .+ +.|+++.|+|+.|...++..|++++.++.+. ++.+| +++++.+. .+++++++++||||||.+++.+
T Consensus 86 ~~~~~~-~~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~-~~~~~v~~~~P~NPtG~~~~~~ 161 (354)
T PRK06358 86 NIVKVT-KP-KKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIK-EEIDLVFLCNPNNPTGQLISKE 161 (354)
T ss_pred HHHHHh-CC-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhc-cCCCEEEEeCCCCCCCCccCHH
Confidence 999976 44 6899999999999999999999999999743 56788 66666665 5799999999999999999999
Q ss_pred HHHHHHcC----CCEEEEccCCccccCCCc---hhhhhccCCcEEEEccChhhhcccCccccccccC-HHHHHHHHHhcC
Q 014492 239 DLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQ 310 (423)
Q Consensus 239 ~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~-~~~~~~l~~~~~ 310 (423)
++++|++. ++++|+||+|.+|.+++. .....+..+++++++||||.||++|+|+||++++ +.+++.+.+...
T Consensus 162 ~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~~~~~~~~~~ 241 (354)
T PRK06358 162 EMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLAEKLLQMRE 241 (354)
T ss_pred HHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCC
Confidence 99988764 899999999999986542 2333445689999999999999999999999984 688899988888
Q ss_pred CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEE
Q 014492 311 PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMI 390 (423)
Q Consensus 311 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v 390 (423)
.++++.++|.++..+|++.+++++.++.++++++++.+.|++++++.+.+++|+|+|+++++ ..++++.|.++||.+
T Consensus 242 ~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g~f~~~~~~~---~~~~~~~l~~~gI~v 318 (354)
T PRK06358 242 PWSINTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKPSVNFIFFKLEK---PIDLRKELLKKGILI 318 (354)
T ss_pred CCcchHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCcceEEEEEcCc---hHHHHHHHHHCCeEE
Confidence 89999999999999998888889999999999999999999886666667788999999973 478999999999999
Q ss_pred EeCCCC-C-CCCeEEEEecChhhHHHHHHHHhhh
Q 014492 391 RHYNNK-E-LKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 391 ~~~~~~-~-~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
++++.+ . .++++||+++..+++++|.++++++
T Consensus 319 ~~~~~f~~~~~~~iRls~~~~~~~~~l~~~l~~~ 352 (354)
T PRK06358 319 RSCSNYRGLDENYYRVAVKSREDNKKLLKALEVI 352 (354)
T ss_pred EECCCCCCCCCCEEEEEeCCHHHHHHHHHHHHHH
Confidence 998874 2 3579999999999999999999875
No 18
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=3.5e-49 Score=385.92 Aligned_cols=351 Identities=36% Similarity=0.593 Sum_probs=303.5
Q ss_pred HHHHhcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHhCCC
Q 014492 67 IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLE 145 (423)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~g~~~lr~~ia~~~g~~ 145 (423)
.++++..+.++.+...+..+++++ ++.++++|+.|+++++++|.+.+++.+. .....||+....++|++++++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~~~~~lr~~ia~~~~~~ 83 (367)
T PRK02731 6 PNPGILDIAPYVPGKPIEELVREY--GIADIIKLASNENPLGPSPKAIEAIRAAADELHRYPDGSGFELKAALAEKFGVD 83 (367)
T ss_pred chhhhcccCCcCCCCCHHHHHHhc--CCCceEEecCCCCCCCCCHHHHHHHHHHHHhhcCCCCCcHHHHHHHHHHHhCcC
Confidence 345566677775555555555555 5567899999999999999998888763 2336788777789999999999999
Q ss_pred CCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEc
Q 014492 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT 225 (423)
Q Consensus 146 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~ 225 (423)
+++|++|+|+++++..++..++++||.|+++.|+|..|...++..|++++.+|. +++.+|++++++.++ .++++|+++
T Consensus 84 ~~~i~~t~G~~~~l~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~~~l~~~~~-~~~~~v~l~ 161 (367)
T PRK02731 84 PERIILGNGSDEILELLARAYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPA-KDYGHDLDAMLAAVT-PRTRLVFIA 161 (367)
T ss_pred HHHEEEcCCHHHHHHHHHHHhcCCCCEEEEecCCHHHHHHHHHHcCCeEEEecc-cCCCCCHHHHHHHhC-CCCcEEEEe
Confidence 999999999999999999999999999999999999998888889999999997 457899999999996 689999999
Q ss_pred CCCCCcCcCCCHHHHHHHHcC---CCEEEEccCCccccCCC---chhhhhccCCcEEEEccChhhhcccCccccccccCH
Q 014492 226 SPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLE---SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299 (423)
Q Consensus 226 ~p~NPtG~~~~~~~l~~i~~~---~~~li~Deay~~~~~~~---~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~ 299 (423)
|||||||.+++.+++.++++. ++++|+||+|.++.+.+ ......+..+++++++||||.||++|+|+||+++++
T Consensus 162 ~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~ 241 (367)
T PRK02731 162 NPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAPP 241 (367)
T ss_pred CCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCCH
Confidence 999999999999999999986 89999999999877533 223334456789999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHH
Q 014492 300 SIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKL 379 (423)
Q Consensus 300 ~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l 379 (423)
++++.+.+...+++.+.++|.++..++++.+++++.++.++++++++.+.|++.+ +.+.|++++|+|+++++..++.++
T Consensus 242 ~~~~~l~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~g~~~~i~~~~~~~~~~~ 320 (367)
T PRK02731 242 EIIDALNRVRQPFNVNSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAELG-LEYIPSVGNFILVDFDDGKDAAEA 320 (367)
T ss_pred HHHHHHHHccCCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCC-CccCCCCceEEEEECCCCCCHHHH
Confidence 9999999888888899999999999999888889999999999999999999885 455577899999999767789999
Q ss_pred HHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 380 KDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 380 ~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
++.|.++||.++++..++.++++||++++.++++++.++|+++
T Consensus 321 ~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~e~~~l~~aL~~~ 363 (367)
T PRK02731 321 YQALLKRGVIVRPVAGYGLPNALRITIGTEEENRRFLAALKEF 363 (367)
T ss_pred HHHHHHCCEEEEeCCCCCCCCeEEEecCCHHHHHHHHHHHHHH
Confidence 9999999999999876555789999999999999999998764
No 19
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=2.4e-49 Score=386.05 Aligned_cols=322 Identities=30% Similarity=0.432 Sum_probs=280.5
Q ss_pred CCCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCe
Q 014492 94 PEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK 172 (423)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~ 172 (423)
.++.++|+.|+++++++|.+.+++.+. .....||+++..+||+++++++|+++++|++|+|+++++..++..++++||+
T Consensus 42 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~Y~~~~~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~~~~l~~~gd~ 121 (370)
T PRK09105 42 AEGAVFLNANECPLGPSPAARDAAARSAALSGRYDLELEDDLRTLFAAQEGLPADHVMAYAGSSEPLNYAVLAFTSPTAG 121 (370)
T ss_pred CCCcEEecCCCCCCCCCHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhCcChhhEEEcCChHHHHHHHHHHHcCCCCE
Confidence 367799999999999999999998763 2335688777889999999999999999999999999999999999999999
Q ss_pred EEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC---CCE
Q 014492 173 IVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PIL 249 (423)
Q Consensus 173 Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~---~~~ 249 (423)
|++++|+|..|...++..|++++.+|.++++.+|++++++.. .+++++++||||||||.+++.++++++++. +++
T Consensus 122 Vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~--~~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~ 199 (370)
T PRK09105 122 LVTADPTYEAGWRAADAQGAPVAKVPLRADGAHDVKAMLAAD--PNAGLIYICNPNNPTGTVTPRADIEWLLANKPAGSV 199 (370)
T ss_pred EEEeCCChHHHHHHHHHcCCeEEEecCCCCCCCCHHHHHhcC--CCCCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcE
Confidence 999999999999999999999999998777889999998773 578999999999999999999999999874 899
Q ss_pred EEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCcHHHHHHHHHHhCCh
Q 014492 250 VVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNP 329 (423)
Q Consensus 250 li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~ 329 (423)
||+||+|.+|...++.....+..+++++++||||.||++|+|+||+++++++++.+.+. ..+..+.++|.++..+|.++
T Consensus 200 lIvDEaY~~f~~~~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~~i~~l~~~-~~~~~~~~~~~aa~~~L~~~ 278 (370)
T PRK09105 200 LLVDEAYIHFSDAPSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARPDLLAKLARF-GHNPLPVPAAAAGLASLRDP 278 (370)
T ss_pred EEEECchHHhccCcchHHHHhhCCCEEEEecccHhhcCCccceeeeecCHHHHHHHHhc-CCCCcCHHHHHHHHHHHhCH
Confidence 99999998886543334444457899999999999999999999999999999998877 55678889999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecCh
Q 014492 330 IYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKP 409 (423)
Q Consensus 330 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~ 409 (423)
+|+++.+++++++++++.+.|++.+ +.+.+++++|++++++ .+..++++.|.++||.+.... ...++|+||+++.+
T Consensus 279 ~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~~~~~f~~~~~~--~~~~~l~~~L~~~gI~v~~~~-~~~~~~~Ris~~~~ 354 (370)
T PRK09105 279 KLVPQRRAENAAVREDTIAWLKKKG-YKCTPSQANCFMVDVK--RPAKAVADAMAKQGVFIGRSW-PIWPNWVRVTVGSE 354 (370)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCC-CCcCCCCCcEEEEeCC--CCHHHHHHHHHHCCcEEecCC-CCCCCeEEEEcCCH
Confidence 8999999999999999999999875 4555677778788775 477899999998999994322 23478999999998
Q ss_pred hhHHHHHHHHhhh
Q 014492 410 EHTDALMECLMHL 422 (423)
Q Consensus 410 ~~~~~l~~al~~l 422 (423)
+++++|.++++++
T Consensus 355 ~~~~~l~~al~~~ 367 (370)
T PRK09105 355 EEMAAFRSAFAKV 367 (370)
T ss_pred HHHHHHHHHHHHH
Confidence 8899999999865
No 20
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=5.9e-49 Score=382.25 Aligned_cols=337 Identities=26% Similarity=0.421 Sum_probs=286.0
Q ss_pred CCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHH
Q 014492 80 ILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADEL 158 (423)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~a 158 (423)
+......+.+++.++.++++|+.|+|++++++.+++++.+ +.....||+.+..++|+++++++++++++|++|+|++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~p~~~~~a~~~~~~~~~~y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~ 84 (356)
T PRK08056 5 GGNIREAATVLGISPDQLLDFSANINPLGMPVSLKRAIIDNLDCAERYPDVEYRHLHQALARHHQVPASWILAGNGETES 84 (356)
T ss_pred CccHHHHHHHhCCChhhEEEeccccCCCCCCHHHHHHHHHHHHhcccCcCccHHHHHHHHHHHhCcChhhEEECCCHHHH
Confidence 3445556777888778899999999999999999999876 222356888788999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC--CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCC
Q 014492 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236 (423)
Q Consensus 159 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~ 236 (423)
+..+++.+ .+|+ +++..|+|..|...++..|++++.+|.++ ++.+| +++++.+. +++|+|+++|||||||.+++
T Consensus 85 l~~~~~~l-~~g~-viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~-~~~k~v~l~~p~NPTG~~~~ 160 (356)
T PRK08056 85 IFAVVSGL-KPRR-AMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DAILEALT-PDLDCLFLCTPNNPTGLLPE 160 (356)
T ss_pred HHHHHHHh-CCCC-EEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HHHHHhcc-CCCCEEEEeCCcCCCCCCCC
Confidence 99999976 6776 67789999999999999999999999753 45555 45556665 78999999999999999999
Q ss_pred HHHHHHHHcC----CCEEEEccCCccccCCC-chhhhhccCCcEEEEccChhhhcccCcccccccc-CHHHHHHHHHhcC
Q 014492 237 DEDLLKILEM----PILVVLDEAYTEFSGLE-SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQ 310 (423)
Q Consensus 237 ~~~l~~i~~~----~~~li~Deay~~~~~~~-~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~-~~~~~~~l~~~~~ 310 (423)
.+++++|++. +++||+||+|.+|.+.. .....+...+++++++||||.||++|+|+||+++ ++++++.+.+...
T Consensus 161 ~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~~~l~~~~~ 240 (356)
T PRK08056 161 RQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYLVNSDDAAVARMRRQQM 240 (356)
T ss_pred HHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCC
Confidence 8888777654 89999999999987644 2333444567999999999999999999999998 4678888887777
Q ss_pred CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEE
Q 014492 311 PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMI 390 (423)
Q Consensus 311 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v 390 (423)
.++++.++|.++..++++.+|.++.++.++++++++.+.|++++++.+.|++++|+|++++. +..++++.|+++||.|
T Consensus 241 ~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~gI~v 318 (356)
T PRK08056 241 PWSINAFAALAGEVILQDRAYQQATWQWLAEEGARFYQALCALPLLTVWPGRANYLFLRCER--PDIDLQRALLTQRILI 318 (356)
T ss_pred CCchhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCCCcEEEEEcCC--ChHHHHHHHHHCCeEE
Confidence 78899999999999998888888889999999999999999886666778889999999963 4678999999999999
Q ss_pred EeCCCC-C-CCCeEEEEecChhhHHHHHHHHhhh
Q 014492 391 RHYNNK-E-LKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 391 ~~~~~~-~-~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
+++..+ + ..+||||+++..++++.|.++|+++
T Consensus 319 ~~~~~f~~~~~~~iRis~~~~~~~~~l~~~l~~~ 352 (356)
T PRK08056 319 RSCANYPGLDSRYYRVAIRSAAENERLLAALRNV 352 (356)
T ss_pred EECCCCCCCCCCEEEEEEcCHHHHHHHHHHHHHH
Confidence 998764 2 2479999999999999999999875
No 21
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.4e-49 Score=382.59 Aligned_cols=320 Identities=32% Similarity=0.569 Sum_probs=280.6
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhcC-C-CCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCe
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQL-K-FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK 172 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~ 172 (423)
.++|+|+.|++++++++.+.+++.+. . ....||+++.++||+++|+++++++++|++|+|+++++.+++++++++||.
T Consensus 24 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~y~~~~~~~lr~aia~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~ 103 (353)
T PRK05387 24 AKLIKLNTNENPYPPSPKVLEAIRAALGDDLRLYPDPNADALRQAIAAYYGLDPEQVFVGNGSDEVLAHAFLAFFNHDRP 103 (353)
T ss_pred cceeeccCCCCCCCCCHHHHHHHHHHhhhhhhcCCCCcHHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCE
Confidence 56799999999999999999998863 2 236788888899999999999999999999999999999999999999999
Q ss_pred EEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC--CCEE
Q 014492 173 IVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM--PILV 250 (423)
Q Consensus 173 Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~--~~~l 250 (423)
|++++|+|+.|...++..|++++.+|.++++.+|++++++ +.++++++|||||||.+++.+++.+|++. ++++
T Consensus 104 vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~-----~~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~l 178 (353)
T PRK05387 104 LLFPDITYSFYPVYAGLYGIPYEEIPLDDDFSIDVEDYLR-----PNGGIIFPNPNAPTGIALPLAEIERILAANPDSVV 178 (353)
T ss_pred EEEeCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHHHHh-----cCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEE
Confidence 9999999999999999999999999987788999999863 35789999999999999999999999986 8999
Q ss_pred EEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC---CCCCcHHHHHHHHHHhC
Q 014492 251 VLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ---PYNVSVAAEVAACAALQ 327 (423)
Q Consensus 251 i~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~---~~~~~~~~~~a~~~~l~ 327 (423)
|+||+|.+|... .........+++++++||||.||++|+|+||+++++++++++.+... .++++.++|.++..++.
T Consensus 179 ivDe~y~~~~~~-~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~ 257 (353)
T PRK05387 179 VIDEAYVDFGGE-SAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGHPELIEALNRVKNSFNSYPLDRLAQAGAIAAIE 257 (353)
T ss_pred EEeCcccccCCc-chHHHHhhCCCEEEEEehhHhhcchhhhceeeecCHHHHHHHHHhhccCCCCCcCHHHHHHHHHHhc
Confidence 999999987532 33333445688999999999999999999999999999999887764 35788999999999998
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec
Q 014492 328 NPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG 407 (423)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~ 407 (423)
+.+++++.+++++++++++.+.|++++ +.+.|++++|+|++++ +.++.++.+.|.++||.++.+..+..++++||+++
T Consensus 258 ~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRis~~ 335 (353)
T PRK05387 258 DEAYFEETRAKVIATRERLVEELEALG-FEVLPSKANFVFARHP-SHDAAELAAKLRERGIIVRHFNKPRIDQFLRITIG 335 (353)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCC-CeECCCcCcEEEEECC-CCCHHHHHHHHHHCCEEEEECCCCCCCCeEEEEeC
Confidence 888889999999999999999999886 4567888999999987 56889999999999999987654445789999999
Q ss_pred ChhhHHHHHHHHhhh
Q 014492 408 KPEHTDALMECLMHL 422 (423)
Q Consensus 408 ~~~~~~~l~~al~~l 422 (423)
..++++++.++|+++
T Consensus 336 ~~~~~~~~~~~L~~~ 350 (353)
T PRK05387 336 TDEEMEALVDALKEI 350 (353)
T ss_pred CHHHHHHHHHHHHHH
Confidence 888888888888764
No 22
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.2e-49 Score=387.44 Aligned_cols=330 Identities=23% Similarity=0.339 Sum_probs=278.5
Q ss_pred hCCCCCCeeEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCCcchHHHHHHHHHHhC------CCC-CcEEEeCCHHHHH
Q 014492 90 LGRKPEDIVKIDANENPYGPPPEVREALGQL-K--FPYIYPDPESRRLRAALAKDSG------LES-DHILVGCGADELI 159 (423)
Q Consensus 90 ~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~Y~~~g~~~lr~~ia~~~g------~~~-~~i~~t~G~~~al 159 (423)
....+.++++|+.|++++++++.+.+++.+. . ..+.|++.|..+||++++++++ +++ ++|++|+|+++++
T Consensus 27 ~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~y~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al 106 (399)
T PRK07681 27 KIAAGHKMIDLSIGNPDMPPADFVREEMVHTANQKESYGYTLSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGL 106 (399)
T ss_pred hhhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhccccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHH
Confidence 3334567899999999999999998888763 2 2255666789999999999973 577 7999999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC--CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCH
Q 014492 160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND 237 (423)
Q Consensus 160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~ 237 (423)
.+++.+++++||.|++++|+|+.|...++..|++++.+|.++ +|.+|++++++.+. .++++|++||||||||.+++.
T Consensus 107 ~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~k~v~l~~P~NPTG~~~s~ 185 (399)
T PRK07681 107 VHLPMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIA-DKAKMMILNFPGNPVPAMAHE 185 (399)
T ss_pred HHHHHHhCCCCCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhcc-ccceEEEEeCCCCCcCcCCCH
Confidence 999999999999999999999999999999999999999753 46789999999886 689999999999999999999
Q ss_pred HHHHHHHcC----CCEEEEccCCccccCCCch---hhhhc-cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhc
Q 014492 238 EDLLKILEM----PILVVLDEAYTEFSGLESR---MEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK 309 (423)
Q Consensus 238 ~~l~~i~~~----~~~li~Deay~~~~~~~~~---~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~ 309 (423)
+++++|++. +++||+||+|.++.+++.. ...+. ..+++|+++||||.||++|+|+||+++++++++.+....
T Consensus 186 ~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~~~~l~~~~~~~~ 265 (399)
T PRK07681 186 DFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIGNEEIVRALTQFK 265 (399)
T ss_pred HHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCccceeEEEecCHHHHHHHHHHH
Confidence 998888764 9999999999998764321 11122 346899999999999999999999999999999998776
Q ss_pred C--CCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHh-
Q 014492 310 Q--PYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAK- 385 (423)
Q Consensus 310 ~--~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~- 385 (423)
. .++++.+.|.++..+|++ .+|+++.++.++++++.+.+.|++.++....|.+|+|+|++++++.++.++.+.|.+
T Consensus 266 ~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p~~g~f~~~~l~~~~~~~~~~~~l~~~ 345 (399)
T PRK07681 266 SNTDYGVFLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRTFGWNVDKPAGSMFVWAEIPKGWTSLSFAYALMDR 345 (399)
T ss_pred hhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeeeEEEEECCCCCCHHHHHHHHHHh
Confidence 4 478899999999999987 478889999999999999999998864323688999999999877788999999885
Q ss_pred CCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014492 386 MGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 386 ~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
+||.++++..+. .++++||+++.. .+++.+++++|
T Consensus 346 ~gv~v~pg~~f~~~~~~~iRis~~~~--~~~~~~~l~~l 382 (399)
T PRK07681 346 ANVVVTPGHAFGPHGEGFVRIALVQD--EEVLQQAVENI 382 (399)
T ss_pred CCEEEeCChhhCcCCCCeEEEEecCC--HHHHHHHHHHH
Confidence 899999987633 357999999854 36677777765
No 23
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-49 Score=344.66 Aligned_cols=352 Identities=59% Similarity=0.926 Sum_probs=316.9
Q ss_pred CCchhHHHHhcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHHHHHH
Q 014492 62 TGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKD 141 (423)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y~~~g~~~lr~~ia~~ 141 (423)
+..++++|...+...++++..++.....+|+ +++.++.++++..|+|+- +...+.||++...+++.++++-
T Consensus 11 ~~i~~l~Pyrcarddf~eg~lldane~a~G~---~iv~ld~~e~~ryPdP~q------~efk~~~~d~rnk~ls~a~~~d 81 (375)
T KOG0633|consen 11 MGISFLRPYRCARDDFQEGLLLDANEAALGR---DIVKLDANENPRYPDPEQ------MEFKYVYPDPRNKRLSDALAQD 81 (375)
T ss_pred ccccccChhhhhhhhccccceecchhhhcCC---CceEeccccCCCCcCHHH------cccccccCCcccchhhhhcccC
Confidence 4567788888888888888888877777776 679999999999888864 3344678999889999999998
Q ss_pred hCCCCCcEEEeCCHHHHHHHHHHHhcCCC-CeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcC-Cc
Q 014492 142 SGLESDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-KP 219 (423)
Q Consensus 142 ~g~~~~~i~~t~G~~~al~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-~~ 219 (423)
-++.+++|.++.|+.|.++.++++.|.|| ++|+...|+|.+|...+...+++++.+|.+.+|.+|.|++.+.++.. ++
T Consensus 82 kpLt~dnic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~ds~i 161 (375)
T KOG0633|consen 82 KPLTSDNICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNPDFSLNVDAIAEVLELDSKI 161 (375)
T ss_pred CCCCccceEEecCcHHHHHHHHhheecCCccceeecCCcceeEEEEeecCCceEEEecCCCCccccHHHHHHHHhccccc
Confidence 89999999999999999999999999999 89999999999999999999999999999999999999999998754 89
Q ss_pred eEEEEcCCCCCcCcCCCHHHHHHHHcC--CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCcccccccc
Q 014492 220 KCIFLTSPNNPDGSIINDEDLLKILEM--PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF 297 (423)
Q Consensus 220 ~~i~l~~p~NPtG~~~~~~~l~~i~~~--~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~ 297 (423)
|++++|+|+||||..+..+.+.+|.+. +.+|++||+|.+|....+...++..++|++++.+|||+||++|+|+||-.+
T Consensus 162 K~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYidFsg~~S~~~lV~kYpNLivlqTlSKsfGLAGiRvG~~~~ 241 (375)
T KOG0633|consen 162 KCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYIDFSGVESRMKLVKKYPNLIVLQTLSKSFGLAGIRVGYGAF 241 (375)
T ss_pred eEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeEeeccccccchHhHhCCceeehhhhhhhcCcceeEeecccc
Confidence 999999999999999999999999998 899999999999998888999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCCCCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCe--ecCCCceEEEEEeCCC
Q 014492 298 PLSIIEYLWRAKQPYNVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLN--PYPSYSNFILCEVTSG 373 (423)
Q Consensus 298 ~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~--~~p~~~~~~~~~~~~~ 373 (423)
+.++++.+++.+.+|++|.++..++.+++.+ .+.++..+..+.+.|.+|...|.+++++. +.+..+||+.+++.++
T Consensus 242 ~~~ia~iln~~KaPYNiS~~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~~~~~~~gg~daNFiLi~v~~~ 321 (375)
T KOG0633|consen 242 PLSIAEILNRAKAPYNISVAGSVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVPFLNDYPGGSDANFILIEVTGG 321 (375)
T ss_pred cHHHHHHHHhccCCccccchhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcCccccCCCCcccccEEEEEEcCC
Confidence 9999999999999999999999999999995 67899999999999999999999998876 6678899999999754
Q ss_pred CC--HHHHHHHHH-hCCcEEEeCCC-CCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 374 MD--AKKLKDDLA-KMGVMIRHYNN-KELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 374 ~~--~~~l~~~L~-~~gI~v~~~~~-~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.+ ++.++..++ ++||.|+..+. .++.|++||++++++++..|.+.++..
T Consensus 322 ~n~~akkly~q~at~~gVvVRfrgse~~c~G~lRitvGt~EentvL~k~~K~~ 374 (375)
T KOG0633|consen 322 DNGMAKKLYKQDATKMGVVVRFRGSEEGCKGYLRITVGTPEENTVLMKCLKQF 374 (375)
T ss_pred CcHHHHHHHHHHHHhcceEEEEcCCccccceeEEEEcCCcccchHHHHHHHhh
Confidence 32 445555554 89999998766 678999999999999999999988864
No 24
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.8e-48 Score=372.11 Aligned_cols=312 Identities=30% Similarity=0.475 Sum_probs=271.4
Q ss_pred CCCeeEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCCcchHHHHHHHHHHhC---CCCCcEEEeCCHHHHHHHHHHHhc
Q 014492 94 PEDIVKIDANENPYGPPPEVREALGQL-K--FPYIYPDPESRRLRAALAKDSG---LESDHILVGCGADELIDLIMRCVL 167 (423)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~Y~~~g~~~lr~~ia~~~g---~~~~~i~~t~G~~~al~~~~~~l~ 167 (423)
+.++++|+.|+|++++++.+.+++.+. . ..+.||+++..+||++++++++ +++++|++|+|+++++..+++.+
T Consensus 18 ~~~~i~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~Y~~~~~~~Lr~aia~~~~~~~~~~~~i~it~Ga~~~i~~~~~~~- 96 (335)
T PRK14808 18 KRDRTYLALNENPFPFPEDLVDEVFRRLNSDTLRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMF- 96 (335)
T ss_pred CCceeEecCCCCCCCCCHHHHHHHHHHhhhhhhhcCCCCChHHHHHHHHHHhCCCCCCcceEEEcCCHHHHHHHHHHHh-
Confidence 467899999999999999999988762 2 1245887789999999999998 88999999999999999999977
Q ss_pred CCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcCC
Q 014492 168 DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP 247 (423)
Q Consensus 168 ~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~ 247 (423)
|.|++++|+|..|...++..|++++.+|.++++.++... + .++++++++|||||||.+++.+++++|++.+
T Consensus 97 ---d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~----~--~~~~~i~i~nP~NPTG~~~s~~~l~~l~~~~ 167 (335)
T PRK14808 97 ---DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVN----V--GEGDVVFIPNPNNPTGHVFEREEIERILKTG 167 (335)
T ss_pred ---CcEEECCCCHHHHHHHHHHcCCeEEEecCCCcCCCChhH----c--cCCCEEEEeCCCCCCCCCcCHHHHHHHHhcC
Confidence 679999999999999999999999999987666655332 2 2568999999999999999999999999889
Q ss_pred CEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCcHHHHHHHHHHhC
Q 014492 248 ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQ 327 (423)
Q Consensus 248 ~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~ 327 (423)
++||+||+|.+|.. ......+...+++++++||||.||++|+|+||+++++++++.+.+.+.+++.+.++|.++..+++
T Consensus 168 ~~ii~DE~Y~~f~~-~~~~~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~~~~~~l~~~~~~~~~~~~~q~a~~~~l~ 246 (335)
T PRK14808 168 AFVALDEAYYEFHG-ESYVDLLKKYENLAVIRTFSKAFSLAAQRIGYVVSSEKFIDAYNRVRLPFNVSYVSQMFAKVALD 246 (335)
T ss_pred CEEEEECchhhhcC-CchHHHHHhCCCEEEEEechhhccCcccceEEEEeCHHHHHHHHHhcCCCCCCHHHHHHHHHHHh
Confidence 99999999999863 23334445567999999999999999999999999999999998888788999999999999998
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec
Q 014492 328 NPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG 407 (423)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~ 407 (423)
+.++..+..+.++++++++.+.|++.+ +.+.+++|+|+|++++ +.+..++.+.|.++||.|+.+. +++||+++
T Consensus 247 ~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~~~g~f~~~~l~-~~~~~~~~~~l~~~Gi~V~~~~-----~~~Risi~ 319 (335)
T PRK14808 247 HREIFEERTKFIVEERERMKSALREMG-YRITDSRGNFVFIFME-KEEKERLLEHLRAKNIAVRSFR-----EGVRITIG 319 (335)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCC-CEECCCCCeEEEEeCC-CccHHHHHHHHHHCCeEEEECC-----CCeEEecC
Confidence 877788888888889999999999886 5667778999999997 4466889999999999999753 68999999
Q ss_pred ChhhHHHHHHHHhhhC
Q 014492 408 KPEHTDALMECLMHLY 423 (423)
Q Consensus 408 ~~~~~~~l~~al~~l~ 423 (423)
..++++++.++|+.++
T Consensus 320 ~~~~~~~~~~~l~~~~ 335 (335)
T PRK14808 320 KREENDMILKELEVFK 335 (335)
T ss_pred CHHHHHHHHHHHHhhC
Confidence 9999999999998764
No 25
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=3.6e-48 Score=381.31 Aligned_cols=329 Identities=18% Similarity=0.248 Sum_probs=270.8
Q ss_pred CCCCCCeeEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCC-cchHHHHHHHHHHh----C--CCCC-cEEEeCCHHHHH
Q 014492 91 GRKPEDIVKIDANENPYGPPPEVREALGQL-K--FPYIYPD-PESRRLRAALAKDS----G--LESD-HILVGCGADELI 159 (423)
Q Consensus 91 ~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~Y~~-~g~~~lr~~ia~~~----g--~~~~-~i~~t~G~~~al 159 (423)
...+.++++|+.|++++++++.+.+++.+. . ....|++ .|.++||+++++++ | ++++ +|++|+|+++++
T Consensus 26 ~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~al 105 (388)
T PRK07366 26 RAAGKELIDLSLGSSDLPAPAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEGT 105 (388)
T ss_pred HhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHHH
Confidence 344567899999999999999999888763 2 2256854 58899999999987 4 6787 699999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC--CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCH
Q 014492 160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND 237 (423)
Q Consensus 160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~ 237 (423)
.++++.++++||.|++++|+|..|...++..|++++.+|.+. ++.+|++++++.+. .++|++++|+||||||.+++.
T Consensus 106 ~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~k~i~l~~p~NPTG~~~s~ 184 (388)
T PRK07366 106 AHLPLAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVL-AQARLMVLSYPHNPTTAIAPL 184 (388)
T ss_pred HHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhc-ccceEEEEeCCCCCCCccCCH
Confidence 999999999999999999999999999999999999999753 46789999988775 579999999999999999999
Q ss_pred HHHHHHHcC----CCEEEEccCCccccCCCc--h--hhhhc-cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHh
Q 014492 238 EDLLKILEM----PILVVLDEAYTEFSGLES--R--MEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA 308 (423)
Q Consensus 238 ~~l~~i~~~----~~~li~Deay~~~~~~~~--~--~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~ 308 (423)
+++++|++. +++||+||+|.+|.+++. . ....+ ..+++++++||||.||++|+|+||+++++++++++.+.
T Consensus 185 ~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~li~~l~~~ 264 (388)
T PRK07366 185 SFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIGNAQLIQALRQV 264 (388)
T ss_pred HHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhheehcCCHHHHHHHHHH
Confidence 999998764 899999999999976432 1 12222 23578999999999999999999999999999999887
Q ss_pred cCCCCCc--HHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCC--CCHHHHHHHH
Q 014492 309 KQPYNVS--VAAEVAACAALQ-NPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSG--MDAKKLKDDL 383 (423)
Q Consensus 309 ~~~~~~~--~~~~~a~~~~l~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~--~~~~~l~~~L 383 (423)
...++.+ ...+.++.+++. +.+|+++.++.++++++.+.+.|+++++....|++|+|+|+++++. .++.++++.|
T Consensus 265 ~~~~~~~~~~~~~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~l 344 (388)
T PRK07366 265 KAVVDFNQYRGILNGAIAALTGPQATVQQTVQIFRQRRDAFINALHQIGWPVPLPEATMYVWAKLPEPWQGNSVEFCTQL 344 (388)
T ss_pred HhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeeEEEEEECCcccCCCHHHHHHHH
Confidence 7654432 333444455554 5789999999999999999999998864335688999999999854 3578888887
Q ss_pred H-hCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014492 384 A-KMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 384 ~-~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
. ++||.++++..++ ..+|+||+++.. .+++.+++++|
T Consensus 345 ~~~~gv~v~pg~~f~~~~~~~iRi~~~~~--~~~l~~~l~rl 384 (388)
T PRK07366 345 VAQTGVAASPGSGFGKSGEGYVRFALVHD--PDILEEAVERI 384 (388)
T ss_pred HHhCCEEEeCchHhCcCCCCeEEEEecCC--HHHHHHHHHHH
Confidence 5 7899999987643 358999999864 47899998887
No 26
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=9.7e-48 Score=379.09 Aligned_cols=326 Identities=21% Similarity=0.335 Sum_probs=273.9
Q ss_pred CCCCeeEcCCCCCCCCCCHHHHHHHhc-C--CCCCCCCCcchHHHHHHHHHHh----C---CCCC-cEEEeCCHHHHHHH
Q 014492 93 KPEDIVKIDANENPYGPPPEVREALGQ-L--KFPYIYPDPESRRLRAALAKDS----G---LESD-HILVGCGADELIDL 161 (423)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~--~~~~~Y~~~g~~~lr~~ia~~~----g---~~~~-~i~~t~G~~~al~~ 161 (423)
++.++++|+.|++++++++.+.+++.+ + ....+||+.|..+||+++++++ | ++++ +|++|+|+++++..
T Consensus 42 ~~~~~i~L~~g~p~~~~~~~~~~~l~~~~~~~~~~~Y~~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~al~~ 121 (410)
T PRK06290 42 PDMELIDMGVGEPDEMADESVVEVLCEEAKKPENRGYADNGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPALAM 121 (410)
T ss_pred CCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHHHHH
Confidence 456799999999999999988888765 2 1235688788999999999996 4 5576 79999999999999
Q ss_pred HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC--CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHH
Q 014492 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239 (423)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~ 239 (423)
++++++++||.|+++.|+|+.|...++..|++++.+|.++ ++.+|++++++.+. .++|+|++++||||||.+++.++
T Consensus 122 ~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~-~~~k~i~l~nP~NPTG~v~s~e~ 200 (410)
T PRK06290 122 LPSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIK-EKAKLLYLNYPNNPTGAVATKEF 200 (410)
T ss_pred HHHHhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhc-ccceEEEEECCCCCCCcCCCHHH
Confidence 9999999999999999999999999999999999999753 57789999999886 58999999999999999999999
Q ss_pred HHHHHcC----CCEEEEccCCccccCCCch--hhhhc-cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCC
Q 014492 240 LLKILEM----PILVVLDEAYTEFSGLESR--MEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY 312 (423)
Q Consensus 240 l~~i~~~----~~~li~Deay~~~~~~~~~--~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~ 312 (423)
+++|++. +++||+||+|.++.+++.. ..... ..+++|+++||||.||++|+|+||+++++++++.+.+....+
T Consensus 201 l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~~~~l~~~l~~~~~~~ 280 (410)
T PRK06290 201 YEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVGNELIVKAFATVKDNN 280 (410)
T ss_pred HHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCccccEEEEeechhhcCCchhheEeEEeCHHHHHHHHHHHhcc
Confidence 8888753 9999999999998754321 11122 246789999999999999999999999999999998877654
Q ss_pred --CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCC-------CCHHHHHHHH
Q 014492 313 --NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSG-------MDAKKLKDDL 383 (423)
Q Consensus 313 --~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~-------~~~~~l~~~L 383 (423)
+.+.++|.++..+|++.+|.++.+++++++++.+.+.|++.++....|.+++|+|+++|++ .++.++++.|
T Consensus 281 ~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p~g~f~l~v~lp~~~~~~~~~~~~~~~~~~L 360 (410)
T PRK06290 281 DSGQFIAIQKAGIYALDHPEITEKIREKYSRRLDKLVKILNEVGFKAEMPGGTFYLYVKAPKGTKSGIKFENAEEFSQYL 360 (410)
T ss_pred ccCCcHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHhCCCeecCCCeeeEEEEECCCccccCCCCCCHHHHHHHH
Confidence 4456899999999998888999999999999999999998863323466788899999854 3688999999
Q ss_pred HhC-CcEEEeCCCCCCCCeEEEEec----ChhhHHHHHHHHhh
Q 014492 384 AKM-GVMIRHYNNKELKGYVRVSVG----KPEHTDALMECLMH 421 (423)
Q Consensus 384 ~~~-gI~v~~~~~~~~~~~iRis~~----~~~~~~~l~~al~~ 421 (423)
.++ +|.+.+++.+ .+|+||+++ ++++++++.++|++
T Consensus 361 l~~~~v~~~p~~~~--~~~lRi~~~~~~~~~~~~~~~~~~l~~ 401 (410)
T PRK06290 361 IKEKLISTVPWDDA--GHFLRFSVTFEAKDEEEEDRILEEIKR 401 (410)
T ss_pred HHhCCEEEECCccc--cCeEEEEEEcccccccchhHHHHHHHH
Confidence 866 4566676543 479999998 78888999888875
No 27
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=8.7e-48 Score=370.96 Aligned_cols=311 Identities=40% Similarity=0.648 Sum_probs=272.2
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhc-CC--CCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCC
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD 171 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd 171 (423)
.++++|+.|++++++++.+.+++.+ +. ...+||+.|.+++|+++++++++++++|++|+|+++++..++..+ +||
T Consensus 18 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~g~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~--~gd 95 (337)
T PRK03967 18 NYRIWLDKNENPFDLPEELKEEIFEELKRVPFNRYPHITSDPLREAIAEFYGLDAENIAVGNGSDELISYLVKLF--EGK 95 (337)
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHhhcCccccCCCCCHHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHHHh--CCC
Confidence 3679999999999999999888775 32 236788888999999999999999999999999999999988866 799
Q ss_pred eEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcCCCEEE
Q 014492 172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVV 251 (423)
Q Consensus 172 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~li 251 (423)
+|+++.|+|..|...++..|++++.++.+.++.+|++.+++.+ .+++++++++||||||.+++.+++.++++.++++|
T Consensus 96 ~V~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~--~~~~~v~~~~P~NPtG~~~~~~~l~~i~~~~~~ii 173 (337)
T PRK03967 96 HIVITPPTFGMYSFYAKLNGIPVIDVPLKEDFTIDGERIAEKA--KNASAVFICSPNNPTGNLQPEEEILKVLETGKPVV 173 (337)
T ss_pred eEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCcCHHHHHHhc--cCCCEEEEeCCCCCCCCCCCHHHHHHHHhcCCEEE
Confidence 9999999999999888999999999998777899999998875 47889999999999999999999999998899999
Q ss_pred EccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCcHHHHHHHHHHhCChHH
Q 014492 252 LDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIY 331 (423)
Q Consensus 252 ~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~ 331 (423)
+||+|.+|... +........+++++++||||.||++|+|+||+++++++++.+.+....++.+.++|.++..+|++.++
T Consensus 174 ~De~y~~~~~~-~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~~~i~~~~~~~~~~~~~~~~q~~~~~~l~~~~~ 252 (337)
T PRK03967 174 LDEAYAEFSGK-SLIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIANEEIIDALYRIKPPFSLNILTMKIVRLALDHYDL 252 (337)
T ss_pred EECchhhhccc-chHHHHhhCCCEEEEecchHhhcchhhhheeeecCHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCHHH
Confidence 99999998642 33334445678999999999999999999999999999999999888889999999999999988778
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhh
Q 014492 332 LEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEH 411 (423)
Q Consensus 332 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~ 411 (423)
..+.++.+.++++.+.+.|.+. ..|++++|+|++++ +.+.|.++||.|+++.. ...+++||+++..++
T Consensus 253 ~~~~~~~~~~~r~~l~~~L~~~----~~~~~~~~~~~~~~-------~~~~l~~~gi~v~~~~~-~~~~~~Ri~~~~~~~ 320 (337)
T PRK03967 253 IEERIDYIIKERERVRRELGEY----AYPSDANFLLLKLD-------AYDYLLENGIVVRKLSG-RLEGHIRVTVGKREE 320 (337)
T ss_pred HHHHHHHHHHHHHHHHHHhccC----cCCCCCcEEEEhHH-------HHHHHHHCCEEEEeCCC-CCCCeEEEecCCHHH
Confidence 8777778888899999999765 24789999998773 67888899999998653 346799999999888
Q ss_pred HHHHHHHHhhh
Q 014492 412 TDALMECLMHL 422 (423)
Q Consensus 412 ~~~l~~al~~l 422 (423)
+++|.++|+++
T Consensus 321 ~~~l~~~l~~~ 331 (337)
T PRK03967 321 NDEFIKALKEI 331 (337)
T ss_pred HHHHHHHHHHH
Confidence 99999999876
No 28
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=7.3e-48 Score=376.46 Aligned_cols=320 Identities=33% Similarity=0.536 Sum_probs=276.1
Q ss_pred CeeEcCCCCCCCCCCHHHHHHHhcC-C----CCCCCCCcchHHHHHHHHHHh------CCCCCcEEEeCCHHHHHHHHHH
Q 014492 96 DIVKIDANENPYGPPPEVREALGQL-K----FPYIYPDPESRRLRAALAKDS------GLESDHILVGCGADELIDLIMR 164 (423)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~-~----~~~~Y~~~g~~~lr~~ia~~~------g~~~~~i~~t~G~~~al~~~~~ 164 (423)
..++|+.|+|++++++.+.+++.+. . ...+||+++..+||+++++++ ++++++|++|+|+++++.++++
T Consensus 27 ~~i~l~~~~~~~~~~~~~~~al~~~l~~~~~~~~~Y~~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~~~~ 106 (368)
T PRK03317 27 VPVRLNTNENPYPPSPALVADIAEAVAEAAAGLNRYPDRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQLLQ 106 (368)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhhhhhhccCCCCchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHHHHH
Confidence 4599999999999999999998763 1 236788888899999999998 5688999999999999999999
Q ss_pred HhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHH
Q 014492 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL 244 (423)
Q Consensus 165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~ 244 (423)
+++++||.|+++.|+|..|...++..|.+++.++.++++++|++++++++.+.+++++++++||||||.+++.+++++|+
T Consensus 107 ~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~ 186 (368)
T PRK03317 107 AFGGPGRTALGFVPSYSMHPIIARGTHTEWVEGPRAADFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPLDDVEAIL 186 (368)
T ss_pred HhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEcccCCCCCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999997778899999999999766889999999999999999999999999
Q ss_pred cC-CCEEEEccCCccccCCC--chhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCcHHHHHH
Q 014492 245 EM-PILVVLDEAYTEFSGLE--SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVA 321 (423)
Q Consensus 245 ~~-~~~li~Deay~~~~~~~--~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~~~~~a 321 (423)
+. ++++|+||+|.+|.+.+ ......+..+++++++||||.||++|+|+||+++++++++.+.....+++.++++|.+
T Consensus 187 ~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~~~~~~~l~~~~~~~~~s~~~~~a 266 (368)
T PRK03317 187 DAAPGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAAPAVVDALRLVRLPYHLSAVTQAA 266 (368)
T ss_pred HHCCceEEEeCCchhhcccCCcCHHHHHHhCCCEEEEEechhhhccchhhhhhhhCCHHHHHHHHhcCCCCCCCHHHHHH
Confidence 97 99999999999987543 2233334456899999999999999999999999999999998877788999999999
Q ss_pred HHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceE-EEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCC
Q 014492 322 ACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNF-ILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKG 400 (423)
Q Consensus 322 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~-~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~ 400 (423)
+..+|++.+++.+.+++++++++.+.+.|++.+ +.+.++.++| +|.+++ ++.++.+.|.++||.+++++ .++
T Consensus 267 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~Gv~v~~~~---~~~ 339 (368)
T PRK03317 267 ARAALRHADELLASVAALRAERDRVVAWLRELG-LRVAPSDANFVLFGRFA---DRHAVWQGLLDRGVLIRDVG---IPG 339 (368)
T ss_pred HHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCC-CEeCCCCCcEEEEeccC---CHHHHHHHHHHCCEEEEeCC---CCC
Confidence 999998866666667778899999999998876 4444444444 554553 57889999999999999764 368
Q ss_pred eEEEEecChhhHHHHHHHHhhh
Q 014492 401 YVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 401 ~iRis~~~~~~~~~l~~al~~l 422 (423)
++||+++..++++++.++++++
T Consensus 340 ~iRi~~~~~~~~~~~~~~l~~~ 361 (368)
T PRK03317 340 WLRVTIGTPEENDAFLAALAEV 361 (368)
T ss_pred eEEEecCCHHHHHHHHHHHHHH
Confidence 9999999988889999998764
No 29
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=7.1e-48 Score=380.12 Aligned_cols=324 Identities=21% Similarity=0.299 Sum_probs=274.0
Q ss_pred CCCCeeEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCc-chHHHHHHHHHHh----C---CCCC-cEEEeCCHHHHHHHH
Q 014492 93 KPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDP-ESRRLRAALAKDS----G---LESD-HILVGCGADELIDLI 162 (423)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Y~~~-g~~~lr~~ia~~~----g---~~~~-~i~~t~G~~~al~~~ 162 (423)
.+.++|+|+.|++++++++.+.+++.+ +.....|+++ |.++||+++++++ | ++++ +|++|+|+++++..+
T Consensus 27 ~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~ 106 (396)
T PRK09147 27 ADLPPISLSIGEPKHPTPAFIKDALAANLDGLASYPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSREALFAF 106 (396)
T ss_pred cCCCeEecCCCCCCCCCCHHHHHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHHHHH
Confidence 467889999999999999999999876 3334678765 7899999999986 6 5564 899999999999999
Q ss_pred HHHhcCC---CCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCH
Q 014492 163 MRCVLDP---GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND 237 (423)
Q Consensus 163 ~~~l~~~---gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~ 237 (423)
+++++++ ||.|+++.|+|..|...++..|++++.+|.+ ++|.+|++++++.+. .++|++++||||||||.+++.
T Consensus 107 ~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~-~~~k~i~l~nP~NPTG~~~s~ 185 (396)
T PRK09147 107 AQTVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVW-ARTQLLFVCSPGNPTGAVLPL 185 (396)
T ss_pred HHHHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHh-hccEEEEEcCCCCCcCccCCH
Confidence 9999999 8999999999999999999999999999974 357899999998876 589999999999999999999
Q ss_pred HHHHHHHcC----CCEEEEccCCccccCCCc--hhhh------h--ccCCcEEEEccChhhhcccCccccccccCHHHHH
Q 014492 238 EDLLKILEM----PILVVLDEAYTEFSGLES--RMEW------V--KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 303 (423)
Q Consensus 238 ~~l~~i~~~----~~~li~Deay~~~~~~~~--~~~~------~--~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~ 303 (423)
+++++|++. +++||+||+|.++.+++. .... . +..+++++++||||.|+++|+|+||+++++++++
T Consensus 186 ~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~~~~l~~ 265 (396)
T PRK09147 186 DDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAGDAALLK 265 (396)
T ss_pred HHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCccceeeeecCCHHHHH
Confidence 999998864 999999999999875432 1111 1 1357999999999999999999999999999999
Q ss_pred HHHHhcC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHH
Q 014492 304 YLWRAKQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKD 381 (423)
Q Consensus 304 ~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~ 381 (423)
.+.+... .++++.+.|.++..++.+.+++.+.++.++++++.+.+.|++. .....|++|+|+|++++ .+..++++
T Consensus 266 ~~~~~~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~p~~g~f~~~~~~--~~~~~~~~ 342 (396)
T PRK09147 266 KFLLYRTYHGCAMPPAVQAASIAAWNDEAHVRENRALYREKFDAVTPILAPV-LDVQLPDAGFYLWAKVP--GDDTEFAR 342 (396)
T ss_pred HHHHHhhhcccCCCHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHh-cCCCCCCeeEEEEEECC--CCHHHHHH
Confidence 8887664 3678889999988888878889999999999999999999875 22246889999999997 46788888
Q ss_pred HHH-hCCcEEEeCCCC--------CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 382 DLA-KMGVMIRHYNNK--------ELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 382 ~L~-~~gI~v~~~~~~--------~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.|+ ++||.+.++..+ ...+++||+++..+ +++.+++++|
T Consensus 343 ~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~~~--~~l~~~l~rl 390 (396)
T PRK09147 343 RLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVAPL--AECVEAAERI 390 (396)
T ss_pred HHHHhCCEEEeCCccccccccCCCCCCCeEEEEecCCH--HHHHHHHHHH
Confidence 886 789999988653 22579999999753 6788888886
No 30
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1.5e-47 Score=368.65 Aligned_cols=305 Identities=23% Similarity=0.339 Sum_probs=256.3
Q ss_pred CeeEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEE
Q 014492 96 DIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVD 175 (423)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~ 175 (423)
++++|+.|+|+++... ...+||++...+||+++++++|+++++|++|+|+++++.+++. ++++|+ |++
T Consensus 17 ~~i~l~~Nenp~~~~~----------~~~~Yp~~~~~~lr~~ia~~~~~~~~~I~it~Gs~~~l~~~~~-~~~~~~-vv~ 84 (332)
T PRK06425 17 RIIDFSANINDFMDIG----------DISIYPEISYTDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLLS-YINVGN-III 84 (332)
T ss_pred CEEEeccccCCCcChh----------hcccCcCcCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHH-HhCCCc-EEE
Confidence 5799999999995221 2267999999999999999999999999999999999999997 567765 667
Q ss_pred cCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC----CCEEE
Q 014492 176 CPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVV 251 (423)
Q Consensus 176 ~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~~~li 251 (423)
++|+|..|...++..|++++.+|.+. +..|.+.+++ .++|+|++||||||||.+++.+++++|++. +++||
T Consensus 85 ~~P~y~~y~~~~~~~G~~v~~vp~~~-~~~~~~~l~~----~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI 159 (332)
T PRK06425 85 VEPNFNEYKGYAFTHGIRISALPFNL-INNNPEILNN----YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLF 159 (332)
T ss_pred eCCChHHHHHHHHHcCCeEEEEeCCc-ccCcHHHHhh----cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEE
Confidence 79999999999999999999999754 4566655542 478999999999999999999999998764 89999
Q ss_pred EccCCccccCCC--chhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCcHHHHHHHHHHhCCh
Q 014492 252 LDEAYTEFSGLE--SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNP 329 (423)
Q Consensus 252 ~Deay~~~~~~~--~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~ 329 (423)
+||+|.+|.++. +........+++++++||||.||+||+|+||+++++++++.+.+...+++.+.+++.++. .....
T Consensus 160 ~DE~Y~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~~li~~l~~~~~~~~~~~~~~~~l~-~~~~~ 238 (332)
T PRK06425 160 IDEAFIDFVPNRAEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATDDYNMKISRKITEPWSVCDPAIDFIR-SIDLD 238 (332)
T ss_pred EecchhccccccchhHHHHhccCCCEEEEeecHHhcCCchhhheeeecCHHHHHHHHHcCCCCccCHHHHHHHH-HhhhH
Confidence 999999998643 233334456899999999999999999999999999999999988877877776654433 22334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCC--CCCeEEEEe
Q 014492 330 IYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKE--LKGYVRVSV 406 (423)
Q Consensus 330 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~--~~~~iRis~ 406 (423)
.++++.++.++++++++.+.|++++ +.+ .+++|+|+|++++ ++.++.+.|.++||.++++..++ +++|+||++
T Consensus 239 ~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~~~~g~f~~~~~~---~~~~~~~~l~~~gi~v~~~~~f~~~~~~~iRis~ 314 (332)
T PRK06425 239 YVAKHSLDIMENERSYLINNLEAMG-FRAAGDPSANFITFMIP---DAHDFYSYLLKNGILVRLLDDYECLGEQYIRIAI 314 (332)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCC-CEECCCCCceEEEEEcC---CHHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEe
Confidence 5677889999999999999999886 444 4678999999986 67899999999999999987642 357999999
Q ss_pred cChhhHHHHHHHHhhh
Q 014492 407 GKPEHTDALMECLMHL 422 (423)
Q Consensus 407 ~~~~~~~~l~~al~~l 422 (423)
+..+++++|.++|+++
T Consensus 315 ~~~~~~~~l~~al~~~ 330 (332)
T PRK06425 315 RRRSFNIKLVNALRNF 330 (332)
T ss_pred CCHHHHHHHHHHHHHH
Confidence 9999999999999874
No 31
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=6.7e-48 Score=379.12 Aligned_cols=328 Identities=20% Similarity=0.255 Sum_probs=278.2
Q ss_pred CCCCCeeEcCCCCCCCCCCHHHHHHHhcC-C-CCCCC-CCcchHHHHHHHHHHhC------CCCCcEEEeCCHHHHHHHH
Q 014492 92 RKPEDIVKIDANENPYGPPPEVREALGQL-K-FPYIY-PDPESRRLRAALAKDSG------LESDHILVGCGADELIDLI 162 (423)
Q Consensus 92 ~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Y-~~~g~~~lr~~ia~~~g------~~~~~i~~t~G~~~al~~~ 162 (423)
..+.++++|+.|++++++++.+.+++.+. . ....| +..|.+++|++++++++ +++++|++|+|+++++..+
T Consensus 29 ~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~ 108 (387)
T PRK08960 29 AAGHDVIHLEIGEPDFTTAEPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLLA 108 (387)
T ss_pred hcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHHHH
Confidence 34567899999999999999999998763 2 22457 55688999999999973 6889999999999999999
Q ss_pred HHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC--CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHH
Q 014492 163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL 240 (423)
Q Consensus 163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l 240 (423)
+..++++||+|++++|+|+.+...++..|++++.+|.+. ++.+|++++++.++ .+++++++++||||||.+++.+++
T Consensus 109 ~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~~~i~i~~p~NPtG~~~~~~~~ 187 (387)
T PRK08960 109 SSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWN-ADTVGALVASPANPTGTLLSRDEL 187 (387)
T ss_pred HHHhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHhC-ccceEEEEECCCCCCCcCcCHHHH
Confidence 999999999999999999999999999999999998643 46899999999886 678899999999999999999999
Q ss_pred HHHHcC----CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC--CCC
Q 014492 241 LKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNV 314 (423)
Q Consensus 241 ~~i~~~----~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~--~~~ 314 (423)
++|++. |+++|+||+|.++.+++.........+++++++||||.||++|+|+||+++++++++.+.+.... ++.
T Consensus 188 ~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~ 267 (387)
T PRK08960 188 AALSQALRARGGHLVVDEIYHGLTYGVDAASVLEVDDDAFVLNSFSKYFGMTGWRLGWLVAPPAAVPELEKLAQNLYISA 267 (387)
T ss_pred HHHHHHHHHcCCEEEEEccccccccCCCCCChhhccCCEEEEeecccccCCcccEEEEEEcCHHHHHHHHHHHhhhccCC
Confidence 998764 99999999999987654333333446789999999999999999999999999999998877654 467
Q ss_pred cHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCe-ecCCCceEEEEEeCC-CCCHHHHHHHHH-hCCcE
Q 014492 315 SVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTS-GMDAKKLKDDLA-KMGVM 389 (423)
Q Consensus 315 ~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~~~~~~~~~-~~~~~~l~~~L~-~~gI~ 389 (423)
+.+.|.++..++.+ .+++++.++.++++++.+.+.|++++... ..|.+++|+|+++++ ..+..++++.|. ++||.
T Consensus 268 s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~f~~~~~~~~~~~~~~~~~~ll~~~gi~ 347 (387)
T PRK08960 268 STPAQHAALACFEPETLAILEARRAEFARRRDFLLPALRELGFGIAVEPQGAFYLYADISAFGGDAFAFCRHFLETEHVA 347 (387)
T ss_pred CHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCcCCCeeEEEEEeccccCCCHHHHHHHHHHhCCEE
Confidence 89999999999975 37888999999999999999999886433 358889999999985 467888998876 78999
Q ss_pred EEeCCCCC---CCCeEEEEecChhhHHHHHHHHhhh
Q 014492 390 IRHYNNKE---LKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 390 v~~~~~~~---~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
+.+|..+. .++|+||+++.+ .+.|.+++++|
T Consensus 348 v~pg~~f~~~~~~~~iRi~~~~~--~~~l~~al~~l 381 (387)
T PRK08960 348 FTPGLDFGRHQAGQHVRFAYTQS--LPRLQEAVERI 381 (387)
T ss_pred EcCchHhCCCCCCCeEEEEecCC--HHHHHHHHHHH
Confidence 99986643 357999999973 58899999886
No 32
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.5e-47 Score=372.14 Aligned_cols=326 Identities=24% Similarity=0.364 Sum_probs=274.9
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhc-C-CCCCCCCCc-chHHHHHHHHHHh------CCCCCcEEEeCCHHHHHHHHHHH
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQ-L-KFPYIYPDP-ESRRLRAALAKDS------GLESDHILVGCGADELIDLIMRC 165 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~-~-~~~~~Y~~~-g~~~lr~~ia~~~------g~~~~~i~~t~G~~~al~~~~~~ 165 (423)
.++++|+.|++++++++.+.+++.+ . .....|+++ |.++||+++++++ ++++++|++|+|+++++.+++.+
T Consensus 29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~ 108 (384)
T PRK06348 29 PDIIDLSLGDPDLITDESIINAAFEDAKKGHTRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLALQS 108 (384)
T ss_pred CCcEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHHHHH
Confidence 4579999999999988888765443 2 233668665 7789999999987 46889999999999999999999
Q ss_pred hcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC--CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHH
Q 014492 166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243 (423)
Q Consensus 166 l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i 243 (423)
++++||.|+++.|+|..|...++..|++++.+|. ++++.+|++++++.+. +++++|++++||||||.+++.+++++|
T Consensus 109 ~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~p~NPtG~~~s~~~~~~l 187 (384)
T PRK06348 109 ILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALIT-SKTKAIILNSPNNPTGAVFSKETLEEI 187 (384)
T ss_pred hcCCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhC-cCccEEEEeCCCCCCCcCCCHHHHHHH
Confidence 9999999999999999999999999999999985 3467799999999886 689999999999999999999999888
Q ss_pred HcC----CCEEEEccCCccccCCCc--hhhhhc-cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC--CCCC
Q 014492 244 LEM----PILVVLDEAYTEFSGLES--RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNV 314 (423)
Q Consensus 244 ~~~----~~~li~Deay~~~~~~~~--~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~--~~~~ 314 (423)
++. +++||+||+|.++.++.. ...... ..+++++++||||.||++|+|+||+++++++++.+..... .++.
T Consensus 188 ~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~~~~~~~~~~~~~~~~~~ 267 (384)
T PRK06348 188 AKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIAPDYIIETAKIINEGICFSA 267 (384)
T ss_pred HHHHHHCCeEEEEecccccceeCCCccchhhcCCCcCcEEEEecchhccCCccccceeeecCHHHHHHHHHHHHhccCCC
Confidence 764 999999999999876532 222222 2578999999999999999999999999999998887764 4778
Q ss_pred cHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeec-CCCceEEEEEeCC-CCCHHHHHHHHH-hCCcEE
Q 014492 315 SVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPY-PSYSNFILCEVTS-GMDAKKLKDDLA-KMGVMI 390 (423)
Q Consensus 315 ~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~~~~~~~~~~~~-~~~~~~l~~~L~-~~gI~v 390 (423)
+.+.|.++..++.+ ++++++.++.++++++.+.+.|++++++.+. |.+++|+|+++++ +.+..++++.|. ++||.+
T Consensus 268 ~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~~~~~~~~~~~~~~l~~~l~~~~gv~v 347 (384)
T PRK06348 268 PTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIESIPNLSLHPPKGSIYAFINIKKTGLSSVEFCEKLLKEAHVLV 347 (384)
T ss_pred CHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEecccCCCCHHHHHHHHHHhCCEEE
Confidence 99999999999977 5678889999999999999999887655544 5677889999974 678899999886 689999
Q ss_pred EeCCCCC--CCCeEEEEecChhhHHHHHHHHhhhC
Q 014492 391 RHYNNKE--LKGYVRVSVGKPEHTDALMECLMHLY 423 (423)
Q Consensus 391 ~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l~ 423 (423)
.+|+.++ .++++||+++.. .+++.+++++|+
T Consensus 348 ~pg~~f~~~~~~~iRi~~~~~--~~~l~~al~~l~ 380 (384)
T PRK06348 348 IPGKAFGESGEGYIRLACTVG--IEVLEEAFNRIE 380 (384)
T ss_pred cCchhhccCCCCeEEEEecCC--HHHHHHHHHHHH
Confidence 9987643 367999999853 478999998873
No 33
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=1.9e-47 Score=376.15 Aligned_cols=327 Identities=24% Similarity=0.287 Sum_probs=272.8
Q ss_pred CCCCeeEcCCCCCCCCCCHHHHHHHhcC-C--CCCCC-CCcchHHHHHHHHHHh----C--CCCC-cEEEeCCHHHHHHH
Q 014492 93 KPEDIVKIDANENPYGPPPEVREALGQL-K--FPYIY-PDPESRRLRAALAKDS----G--LESD-HILVGCGADELIDL 161 (423)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~Y-~~~g~~~lr~~ia~~~----g--~~~~-~i~~t~G~~~al~~ 161 (423)
.+.++++|+.+.+++++++.+.+++.+. . ...+| |..|..+||+++++++ | ++++ +|++|+|+++++..
T Consensus 30 ~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~~ 109 (389)
T PRK08068 30 EGHDVINLGQGNPDQPTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGLVE 109 (389)
T ss_pred cCCCeEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHH
Confidence 3457899999988888788888887652 2 22578 4568999999999997 5 5777 89999999999999
Q ss_pred HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC--CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHH
Q 014492 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239 (423)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~ 239 (423)
++..++++||.|++++|+|..|...++..|++++.+|.++ ++.+|++++++.+. .++++|++|+||||||.+++.++
T Consensus 110 ~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~P~NPTG~~~s~~~ 188 (389)
T PRK08068 110 LPQCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVA-EKAKLMYLNYPNNPTGAVATKAF 188 (389)
T ss_pred HHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhcc-ccceEEEEECCCCCCCCcCCHHH
Confidence 9999999999999999999999999999999999999753 57789999999886 58999999999999999999999
Q ss_pred HHHHHcC----CCEEEEccCCccccCCC-ch---hhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC
Q 014492 240 LLKILEM----PILVVLDEAYTEFSGLE-SR---MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP 311 (423)
Q Consensus 240 l~~i~~~----~~~li~Deay~~~~~~~-~~---~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~ 311 (423)
+++|++. +++||+||+|.++.+++ .. ....+..+++++++||||.||++|+|+||+++++++++.+.+....
T Consensus 189 ~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~l~~~l~~~~~~ 268 (389)
T PRK08068 189 FEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVGNESVIEAINLLQDH 268 (389)
T ss_pred HHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccceeEeEecCHHHHHHHHHHHhh
Confidence 9887764 99999999999887643 21 1222235688999999999999999999999999999999887766
Q ss_pred CC--CcHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHH-hCC
Q 014492 312 YN--VSVAAEVAACAALQ-NPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-KMG 387 (423)
Q Consensus 312 ~~--~~~~~~~a~~~~l~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~-~~g 387 (423)
+. .+++.|.++..++. +.+++++.+++++++++.+.+.|+++++....|.+++|+|++++++.++.++.+.|+ ++|
T Consensus 269 ~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~g~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~g 348 (389)
T PRK08068 269 LFVSLFGAIQDAAIEALLSDQSCVAELVARYESRRNAFISACREIGWEVDAPKGSFFAWMPVPKGYTSEQFADLLLEKAH 348 (389)
T ss_pred ccCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeeEEEEEECCCCCCHHHHHHHHHHhCC
Confidence 43 44556777777775 467889999999999999999999886433345677889999987778999999998 479
Q ss_pred cEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014492 388 VMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 388 I~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
|.|+++..++ .++++||+++..+ +++.+++++|
T Consensus 349 i~v~pg~~f~~~~~~~iRi~~~~~~--~~l~~al~~l 383 (389)
T PRK08068 349 VAVAPGNGFGEHGEGYVRVGLLTDE--ERLREAVERI 383 (389)
T ss_pred EEEecchHhCccCCCeEEEEEcCCH--HHHHHHHHHH
Confidence 9999987533 3679999998643 7899999886
No 34
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=4.3e-47 Score=373.34 Aligned_cols=334 Identities=23% Similarity=0.342 Sum_probs=277.4
Q ss_pred HHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCCc-chHHHHHHHHHHh----C--CCCC-cEEEeCC
Q 014492 86 LSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-K--FPYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCG 154 (423)
Q Consensus 86 ~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~Y~~~-g~~~lr~~ia~~~----g--~~~~-~i~~t~G 154 (423)
.+++....+.++++|+.|++++++++.+.+++.+. . ....|+++ |.++||+++++++ | ++++ +|++|+|
T Consensus 22 ~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G 101 (385)
T PRK09276 22 KKAEKIARGVDVISLGIGDPDLPTPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIG 101 (385)
T ss_pred HHHHHHhcCCCEEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccC
Confidence 34444445667899999999999999998888763 2 23578765 7899999999997 4 4565 5999999
Q ss_pred HHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC--CCCCCHHHHHHHhhcCCceEEEEcCCCCCcC
Q 014492 155 ADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDG 232 (423)
Q Consensus 155 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG 232 (423)
+++++..+++.++++||+|++++|+|+.|...++..|++++.+|.++ ++.+|++++++.+. .++++|+++|||||||
T Consensus 102 ~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~-~~~~~v~l~~p~NPtG 180 (385)
T PRK09276 102 SKEGIAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVA-KKAKLMFINYPNNPTG 180 (385)
T ss_pred cHHHHHHHHHHhCCCCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhcc-ccceEEEEeCCCCCCC
Confidence 99999999999999999999999999999999999999999999643 57789999999886 6899999999999999
Q ss_pred cCCCHHHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhcc-CCcEEEEccChhhhcccCccccccccCHHHHHH
Q 014492 233 SIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY 304 (423)
Q Consensus 233 ~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~-~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~ 304 (423)
.+++.+++++|++. +++||+||+|.++.+++. .....+. .+++++++||||.||++|+|+||+++++++++.
T Consensus 181 ~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~~~~l~~~ 260 (385)
T PRK09276 181 AVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVGNADLIAG 260 (385)
T ss_pred CCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhheeeeCCHHHHHH
Confidence 99999988888764 899999999999876432 1112222 467899999999999999999999999999999
Q ss_pred HHHhcCC--CCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCCCCCHHHHH
Q 014492 305 LWRAKQP--YNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTSGMDAKKLK 380 (423)
Q Consensus 305 l~~~~~~--~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~~~~~~~l~ 380 (423)
+.+.... .+.+.+.|.++..++.+ ..|+++.+++++++++++.+.|++++ +.+ .|.+++|+|++++++.+..++.
T Consensus 261 ~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~v~~~~~~~~~~l~ 339 (385)
T PRK09276 261 LGKVKSNVDSGVFQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRKLG-LEVEPPKATFYVWAPVPKGYTSAEFA 339 (385)
T ss_pred HHHHHhhccCCCCHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhCC-CcccCCCcceEEEEECCCCCCHHHHH
Confidence 8876653 34677889999999975 67889999999999999999999885 443 4567788999998778899999
Q ss_pred HHHH-hCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhhC
Q 014492 381 DDLA-KMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHLY 423 (423)
Q Consensus 381 ~~L~-~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l~ 423 (423)
++|. ++||.++++..+. .++++||+++.++ +++.+++++|+
T Consensus 340 ~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~~~--~~l~~~l~~l~ 383 (385)
T PRK09276 340 TLLLDKAGVVVTPGNGFGEYGEGYFRIALTVPD--ERIEEAVERIK 383 (385)
T ss_pred HHHHHhCCEEECCchhhCCCCCCeEEEEeCCCH--HHHHHHHHHHh
Confidence 9887 6899999986632 3579999998643 78999998873
No 35
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=3.7e-47 Score=366.38 Aligned_cols=317 Identities=22% Similarity=0.264 Sum_probs=264.3
Q ss_pred CCCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHhCCC-CCcEEEeCCHHH
Q 014492 79 PILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLE-SDHILVGCGADE 157 (423)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y~~~g~~~lr~~ia~~~g~~-~~~i~~t~G~~~ 157 (423)
.+.....++..+|.++.++++|+.|+|++++++....+ ....+||++. .+||+++++++|+. +++|++|+|+++
T Consensus 8 hg~~~~~~~~~~~~~~~~~i~ls~Nenp~~~~~~~~~~----~~~~~Yp~~~-~~L~~~ia~~~~~~~~~~I~i~~Gs~e 82 (339)
T PRK06959 8 HGGNLHEAARRYGIPYDAWLDLSTGINPHGYPVPPVPA----DAWRRLPEDD-DGLAACAARYYGAPDAAHVLPVAGSQA 82 (339)
T ss_pred CCchHHHHHHHcCCChhhhceeccCCCCCCCCCCCCCH----HHHHhCCCch-HHHHHHHHHHhCCCCcccEEECcCHHH
Confidence 44556666777787667889999999999887322111 1125699876 89999999999996 589999999999
Q ss_pred HHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCH
Q 014492 158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND 237 (423)
Q Consensus 158 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~ 237 (423)
++..+.. ++++|+ |+++.|+|..|...++..|++++.++.++ +. +. .+++++++||||||||.+++.
T Consensus 83 ~i~~l~~-~~~~g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~~~------~~----~~-~~~~~v~l~nPnNPTG~~~s~ 149 (339)
T PRK06959 83 AIRALPA-LLPRGR-VGIAPLAYSEYAPAFARHGHRVVPLDEAA------DT----LP-AALTHLIVVNPNNPTAERLPA 149 (339)
T ss_pred HHHHHHH-hcCCCe-EEEcCCCcHHHHHHHHHCCCEEEeecccc------hh----cc-ccCCEEEEeCCCCCCCCCCCH
Confidence 9997765 678877 88899999999999999999999998643 22 22 356789999999999999999
Q ss_pred HHHHHHHcC----CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCC
Q 014492 238 EDLLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN 313 (423)
Q Consensus 238 ~~l~~i~~~----~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~ 313 (423)
+++++|++. +.++|+||+|.+|....+... ....+++++++||||.||++|+|+||+++++++++.+.+...+|+
T Consensus 150 ~~l~~l~~~~~~~~~~vI~DEay~~~~~~~s~~~-~~~~~~vi~l~SfSK~~gl~GlRiGy~v~~~~li~~l~~~~~~~~ 228 (339)
T PRK06959 150 ARLLRWHAQLAARGGTLIVDEAFADTLPAASLAA-HTDRPGLVVLRSVGKFFGLAGVRAGFVLAAPALLAALRDALGAWT 228 (339)
T ss_pred HHHHHHHHHHHHcCCEEEEECCCccCCCcccchh-ccCCCCEEEEecChhhcCCcchheEEEecCHHHHHHHHHhcCCCC
Confidence 999998752 889999999999875433222 224578999999999999999999999999999999999988899
Q ss_pred CcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeC
Q 014492 314 VSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHY 393 (423)
Q Consensus 314 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~ 393 (423)
++.++|.++.++|++.+|.++.+++++++++++.+.|++++ +.+. +.++|+|++++ +..++.+.|.++||.|+.+
T Consensus 229 vs~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~-~~~~f~~~~~~---~~~~l~~~l~~~GI~vr~~ 303 (339)
T PRK06959 229 VSGPARHAVRAAFADAAWQAAMRERLAADGARLAALLRAHG-FAVH-ATPLFSWTDDP---RAAALHAALARRGIWTRYF 303 (339)
T ss_pred CcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCC-CCcc-CcceEEEEeCC---CHHHHHHHHHhCCeEEEEC
Confidence 99999999999999989999999999999999999999986 3433 46799999885 5788999999999999976
Q ss_pred CCCCCCCeEEEEe-cChhhHHHHHHHHhhh
Q 014492 394 NNKELKGYVRVSV-GKPEHTDALMECLMHL 422 (423)
Q Consensus 394 ~~~~~~~~iRis~-~~~~~~~~l~~al~~l 422 (423)
+ ..+|+||++ ++.+++++|.++|+++
T Consensus 304 ~---~~~~lRisi~~~~~e~~~l~~al~~~ 330 (339)
T PRK06959 304 A---PPPSVRFGLPADEAEWQRLEDALAEC 330 (339)
T ss_pred C---CCCeEEEECCCCHHHHHHHHHHHHHH
Confidence 4 356999999 5778889999998764
No 36
>PLN02187 rooty/superroot1
Probab=100.00 E-value=5.5e-47 Score=378.47 Aligned_cols=327 Identities=21% Similarity=0.317 Sum_probs=269.5
Q ss_pred CCCCeeEcCCCCCC----CCCCHHHHHHHhcC-C--CCCCC-CCcchHHHHHHHHHHh------CCCCCcEEEeCCHHHH
Q 014492 93 KPEDIVKIDANENP----YGPPPEVREALGQL-K--FPYIY-PDPESRRLRAALAKDS------GLESDHILVGCGADEL 158 (423)
Q Consensus 93 ~~~~~i~l~~~~~~----~~~~~~v~~al~~~-~--~~~~Y-~~~g~~~lr~~ia~~~------g~~~~~i~~t~G~~~a 158 (423)
+..++|+|+.|+++ +.+++++.+++.+. . ....| |..|.+++|+++|+++ ++++++|++|+|++++
T Consensus 64 ~~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~a 143 (462)
T PLN02187 64 VNKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQG 143 (462)
T ss_pred CCCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHH
Confidence 45789999999887 55667888877662 2 23568 6668999999999997 3689999999999999
Q ss_pred HHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC--CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCC
Q 014492 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236 (423)
Q Consensus 159 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~ 236 (423)
+.+++.++++|||.|+++.|+|+.|...++..|++++.+++ +++|++|++++++.+. .++++++++|||||||.+++
T Consensus 144 l~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~-~~~~~v~i~nP~NPTG~v~s 222 (462)
T PLN02187 144 IEIVFESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIAD-ENTVAMVVINPNNPCGNVYS 222 (462)
T ss_pred HHHHHHHhcCCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcC-CCcEEEEEeCCCCCCCCccC
Confidence 99999999999999999999999999999999999999986 3578999999999886 68899999999999999999
Q ss_pred HHHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhccCCcEEEEccChhhhcccCccccccccC-H-H---HHHH
Q 014492 237 DEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-L-S---IIEY 304 (423)
Q Consensus 237 ~~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~-~-~---~~~~ 304 (423)
.+++++|++. +++||+||+|.++.+++. ....+....++++++||||.|++||+|+||++++ + . +++.
T Consensus 223 ~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGlRiG~~v~~~p~~~~~~~~~ 302 (462)
T PLN02187 223 HDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGWKIGWIALNDPEGVFETTKV 302 (462)
T ss_pred HHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcCCccceeEEEEecCchhHHHHHHH
Confidence 9999888764 999999999999876432 2223333357999999999999999999999983 3 2 3345
Q ss_pred HHHhcCCCC----CcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCe--ecCCCceEEEEEeCC----
Q 014492 305 LWRAKQPYN----VSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLN--PYPSYSNFILCEVTS---- 372 (423)
Q Consensus 305 l~~~~~~~~----~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~--~~p~~~~~~~~~~~~---- 372 (423)
+...+..++ ++.+.|.++.++|++ .+|+++.++.++++++.+.+.|+++++.. ..|++++|+|++++.
T Consensus 303 ~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~~~~P~gg~fl~~~l~~~~~~ 382 (462)
T PLN02187 303 LQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKKPESCTYLLTKLELSLMD 382 (462)
T ss_pred HHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCCCCCEeEEEEeecChhhCC
Confidence 655555443 478999999999974 57899999999999999999999987543 257889999998752
Q ss_pred CC-CHHHHHHHH-HhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 373 GM-DAKKLKDDL-AKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 373 ~~-~~~~l~~~L-~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
+. +..+++..+ .++||.+.+|..++.++|+||+++..+ +.|.+++++|
T Consensus 383 ~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~~~~--e~l~~al~rL 432 (462)
T PLN02187 383 NIKDDIDFCVKLAREENLVFLPGDALGLKNWMRITIGVEA--HMLEDALERL 432 (462)
T ss_pred CCCCHHHHHHHHHhhCCEEEECccccCCCCeEEEEeCCCH--HHHHHHHHHH
Confidence 22 465776665 589999999987777899999999764 7788888876
No 37
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.3e-47 Score=373.18 Aligned_cols=326 Identities=16% Similarity=0.260 Sum_probs=272.9
Q ss_pred CCCeeEcCCCCCC-CCCCHHHHHHHhc-CC--CCCCCCC-cchHHHHHHHHHHh----C--CCC-CcEEEeCCHHHHHHH
Q 014492 94 PEDIVKIDANENP-YGPPPEVREALGQ-LK--FPYIYPD-PESRRLRAALAKDS----G--LES-DHILVGCGADELIDL 161 (423)
Q Consensus 94 ~~~~i~l~~~~~~-~~~~~~v~~al~~-~~--~~~~Y~~-~g~~~lr~~ia~~~----g--~~~-~~i~~t~G~~~al~~ 161 (423)
+.+.++|+.+.++ +++++.+.+++.+ +. ...+|++ .|.++||+++++++ | +++ ++|++|+|+++++..
T Consensus 38 ~~~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~ 117 (405)
T PRK06207 38 PGRPVDFSHGDVDAHEPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALFL 117 (405)
T ss_pred CCCceecCCcCCCCCCCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHH
Confidence 4577999988766 5677888777765 22 1256865 47899999999886 6 466 899999999999999
Q ss_pred HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC-----CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCC
Q 014492 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-----SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236 (423)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-----~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~ 236 (423)
++.+++++||+|++++|+|+.+...++..|++++.++.+ +++++|++++++.+. .++++|++||||||||.+++
T Consensus 118 ~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~-~~~k~v~l~~P~NPTG~~~s 196 (405)
T PRK06207 118 AVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFK-AGVRVFLFSNPNNPAGVVYS 196 (405)
T ss_pred HHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhh-hcCeEEEECCCCCCCCcCCC
Confidence 999999999999999999999999999999999999864 368899999999986 57999999999999999999
Q ss_pred HHHHHHHHcC----CCEEEEccCCccccCCCch---hhhh-ccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHh
Q 014492 237 DEDLLKILEM----PILVVLDEAYTEFSGLESR---MEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA 308 (423)
Q Consensus 237 ~~~l~~i~~~----~~~li~Deay~~~~~~~~~---~~~~-~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~ 308 (423)
.+++++|++. +++||+||+|.++.+++.. ...+ ...+++++++||||.|+++|+|+||+++++++++++.+.
T Consensus 197 ~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~~~l~~~~~~~ 276 (405)
T PRK06207 197 AEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFGSPAIIDRMEKL 276 (405)
T ss_pred HHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEcCHHHHHHHHHH
Confidence 9998888764 9999999999998764321 1111 236899999999999999999999999999999999877
Q ss_pred cCC--CCCcHHHHHHHHHHhCCh-HHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCC-CCCHHHHHHHH
Q 014492 309 KQP--YNVSVAAEVAACAALQNP-IYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS-GMDAKKLKDDL 383 (423)
Q Consensus 309 ~~~--~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~-~~~~~~l~~~L 383 (423)
... .+.+.+.|.++..+|++. .|+++..++++++++.+.+.|++++++.+ .|++|+|+|+++++ ..++.++.+.|
T Consensus 277 ~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~fl~~~l~~~~~~~~~~~~~l 356 (405)
T PRK06207 277 QAIVSLRAAGYSQAVLRTWFSEPDGWMKDRIARHQAIRDDLLRVLRGVEGVFVRAPQAGSYLFPRLPRLAVSLHDFVKIL 356 (405)
T ss_pred HhHhccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEEEEEeCcccCCCHHHHHHHH
Confidence 654 456778999999999764 67888888899999999999988755554 46789999999985 46788999999
Q ss_pred H-hCCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 384 A-KMGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 384 ~-~~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
. ++||.+.+|..+ ..++++||+++.. .++|.+++++|
T Consensus 357 ~~~~gV~v~pG~~F~~~~~~~~Ris~~~~--~~~l~~al~rl 396 (405)
T PRK06207 357 RLQAGVIVTPGTEFSPHTADSIRLNFSQD--HAAAVAAAERI 396 (405)
T ss_pred HHhcCEEEeCchHhCCCCCCeEEEEecCC--HHHHHHHHHHH
Confidence 7 789999998763 3468999999974 37899998886
No 38
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=2.4e-46 Score=369.96 Aligned_cols=325 Identities=22% Similarity=0.351 Sum_probs=274.2
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhcC-CC-CCCCCCc-chHHHHHHHHHHh----C--CCCC-cEEEeCCHHHHHHHHHH
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQL-KF-PYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCGADELIDLIMR 164 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~-~~~Y~~~-g~~~lr~~ia~~~----g--~~~~-~i~~t~G~~~al~~~~~ 164 (423)
.++|+|+.|.+++++++.+.+++.+. .. ...|+++ |.++||+++++++ | ++++ +|++|+|+++++..++.
T Consensus 54 ~~~i~l~~G~P~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~~~ 133 (413)
T PLN00175 54 HGAINLGQGFPNFDGPDFVKEAAIQAIRDGKNQYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAATIL 133 (413)
T ss_pred CCeEecCCCCCCCCCCHHHHHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHHHHH
Confidence 46899999999999888888888763 22 2578654 7999999999987 3 4676 79999999999999999
Q ss_pred HhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHH
Q 014492 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243 (423)
Q Consensus 165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i 243 (423)
+++++||+|++++|+|..|...++..|++++.++.+ +++.+|++++++.+. .++|+|++++||||||.+++.+++++|
T Consensus 134 ~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~-~~~k~i~i~~p~NPtG~~~s~~~l~~l 212 (413)
T PLN00175 134 GLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPPDFAVPEDELKAAFT-SKTRAILINTPHNPTGKMFTREELELI 212 (413)
T ss_pred HhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEEECCcccCCCCHHHHHHhcC-cCceEEEecCCCCCCCcCCCHHHHHHH
Confidence 999999999999999999999999999999999975 458899999999986 589999999999999999999998888
Q ss_pred HcC----CCEEEEccCCccccCCCch--hhhh-ccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC--CCCC
Q 014492 244 LEM----PILVVLDEAYTEFSGLESR--MEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNV 314 (423)
Q Consensus 244 ~~~----~~~li~Deay~~~~~~~~~--~~~~-~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~--~~~~ 314 (423)
++. +++||+||+|.++.+++.. ...+ ...+++|+++||||.|+++|+|+||+++++++++.+..... .++.
T Consensus 213 ~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~~~l~~~l~~~~~~~~~~~ 292 (413)
T PLN00175 213 ASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFAT 292 (413)
T ss_pred HHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCcchheeeeEeCHHHHHHHHHHHhhccCCC
Confidence 764 9999999999998764422 2222 23578999999999999999999999999999998887764 4788
Q ss_pred cHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCC-CC-CHHHHHHHHH-hCCcEE
Q 014492 315 SVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS-GM-DAKKLKDDLA-KMGVMI 390 (423)
Q Consensus 315 ~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~-~~-~~~~l~~~L~-~~gI~v 390 (423)
+.+.|.++..+|++ ..|+++.++.++++++.+.+.|++.+.....|.+++|+|++++. +. +..++++.|. ++||.+
T Consensus 293 s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p~g~~f~~~~~~~~~~~~~~~~~~~ll~~~gV~v 372 (413)
T PLN00175 293 ATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKEVGFKVYPSSGTYFVMVDHTPFGFENDIAFCEYLIEEVGVAA 372 (413)
T ss_pred CHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeeEEEEEeccccCCCCHHHHHHHHHHhCCEEE
Confidence 99999999999987 47889999999999999999999875332346778899999842 43 5788999887 679999
Q ss_pred EeCCCC-----CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 391 RHYNNK-----ELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 391 ~~~~~~-----~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.|+..+ ...+++||+++.. .++|.+++++|
T Consensus 373 ~pg~~F~~~~~~~~~~iRls~~~~--~e~l~~~~~rL 407 (413)
T PLN00175 373 IPPSVFYLNPEDGKNLVRFAFCKD--EETLRAAVERM 407 (413)
T ss_pred eCchHhCCCCCCCCCEEEEEEcCC--HHHHHHHHHHH
Confidence 988653 2357999999964 47899999887
No 39
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=6.9e-47 Score=372.71 Aligned_cols=324 Identities=22% Similarity=0.334 Sum_probs=272.9
Q ss_pred CCCCeeEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCc-chHHHHHHHHHHh--------CCCCC-cEEEeCCHHHHHHH
Q 014492 93 KPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDP-ESRRLRAALAKDS--------GLESD-HILVGCGADELIDL 161 (423)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Y~~~-g~~~lr~~ia~~~--------g~~~~-~i~~t~G~~~al~~ 161 (423)
.+.++++|+.|++++++++.+.+++.+ ......|+++ |.++||+++++++ |++++ +|++|+|+++++..
T Consensus 26 ~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~al~~ 105 (393)
T TIGR03538 26 ASKPPIALSIGEPKHPTPAFVLEALRENLHGLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFA 105 (393)
T ss_pred cCCCeEEecCCCCCCCCCHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHHHHHH
Confidence 356789999999999999999999886 3334678665 7899999999997 46674 89999999999999
Q ss_pred HHHHhcCCCCe--EEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCH
Q 014492 162 IMRCVLDPGDK--IVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND 237 (423)
Q Consensus 162 ~~~~l~~~gd~--Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~ 237 (423)
+++++++|||. |+++.|+|..|...++..|++++.+|.+ +++.+|++++++.+. .++|+|+++|||||||.+++.
T Consensus 106 ~~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~k~i~l~~p~NPtG~~~s~ 184 (393)
T TIGR03538 106 FAQAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVW-RRCQLLFVCSPGNPTGAVLSL 184 (393)
T ss_pred HHHHHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHh-hcceEEEEeCCCCCcCcccCH
Confidence 99999999986 9999999999999999999999999974 357889999999886 589999999999999999999
Q ss_pred HHHHHHHcC----CCEEEEccCCccccCCC--ch---hhh---h--ccCCcEEEEccChhhhcccCccccccccCHHHHH
Q 014492 238 EDLLKILEM----PILVVLDEAYTEFSGLE--SR---MEW---V--KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 303 (423)
Q Consensus 238 ~~l~~i~~~----~~~li~Deay~~~~~~~--~~---~~~---~--~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~ 303 (423)
+++++|++. +++||+||+|.++.+.+ .. ... . ...+++++++||||.|+++|+|+||+++++++++
T Consensus 185 ~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~~~~l~~ 264 (393)
T TIGR03538 185 DTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAGDAEILK 264 (393)
T ss_pred HHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCcccceEEEecCHHHHH
Confidence 999888764 99999999999887542 11 111 1 1357899999999999999999999999999999
Q ss_pred HHHHhcC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHH
Q 014492 304 YLWRAKQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKD 381 (423)
Q Consensus 304 ~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~ 381 (423)
++.+... .++++.+.|.++...+.+.+++++.++.++++++.+.+.|++. .....|++|+|+|++++ .+..++.+
T Consensus 265 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~p~gg~f~~~~~~--~~~~~~~~ 341 (393)
T TIGR03538 265 AFLRYRTYHGCAMPIPTQLASIAAWNDEQHVRENRALYREKFAAVLEILGQV-LDLELPDAGFYLWPKVP--GDDEAFAR 341 (393)
T ss_pred HHHHHHHhhccCcCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhh-CcccCCCeeEEEEEECC--CCHHHHHH
Confidence 8887765 3567889999988888878889999999999999999999875 12246889999999997 46788998
Q ss_pred HHH-hCCcEEEeCCCCC--------CCCeEEEEecChhhHHHHHHHHhhh
Q 014492 382 DLA-KMGVMIRHYNNKE--------LKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 382 ~L~-~~gI~v~~~~~~~--------~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.|. ++||.+.+++.+. ..+++||+++.. .+++.+++++|
T Consensus 342 ~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~~--~~~l~~~l~~l 389 (393)
T TIGR03538 342 ALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVAP--LEECVEAAERI 389 (393)
T ss_pred HHHHHCCEEEeCCccccccccCCCCCCCEEEEEecCC--HHHHHHHHHHH
Confidence 886 6899999887532 357999999864 37788888876
No 40
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=1.1e-46 Score=372.34 Aligned_cols=327 Identities=19% Similarity=0.229 Sum_probs=271.3
Q ss_pred CCCCeeEcCCCCCC----CCCCHHHHHHHhc-CCC--CCCC-CCcchHHHHHHHHHHh------CCCCCcEEEeCCHHHH
Q 014492 93 KPEDIVKIDANENP----YGPPPEVREALGQ-LKF--PYIY-PDPESRRLRAALAKDS------GLESDHILVGCGADEL 158 (423)
Q Consensus 93 ~~~~~i~l~~~~~~----~~~~~~v~~al~~-~~~--~~~Y-~~~g~~~lr~~ia~~~------g~~~~~i~~t~G~~~a 158 (423)
.+.++|+|+.|+++ +++++.+.+++.+ +.. ..+| |..|..+||+++++++ ++++++|++|+|++++
T Consensus 30 ~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it~G~~~a 109 (409)
T PLN00143 30 DHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTLGCKHA 109 (409)
T ss_pred CCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEecChHHH
Confidence 35689999999998 8999999888876 222 2568 6678999999999997 4688999999999999
Q ss_pred HHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCC
Q 014492 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236 (423)
Q Consensus 159 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~ 236 (423)
+.+++.+++++||.|+++.|+|+.|...++..|++++.++.+ +++.+|++++++++. .++++++++|||||||.+++
T Consensus 110 l~~~~~~l~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~~~~~nP~NPTG~~~s 188 (409)
T PLN00143 110 AEIIIKVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIAD-ENTIAMVIINPGNPCGSVYS 188 (409)
T ss_pred HHHHHHHHcCCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhcc-cCCEEEEEECCCCCCCCccC
Confidence 999999999999999999999999999999999999999863 567899999999886 67899999999999999999
Q ss_pred HHHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhccCCcEEEEccChhhhcccCccccccccC-H-HH------
Q 014492 237 DEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-L-SI------ 301 (423)
Q Consensus 237 ~~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~-~-~~------ 301 (423)
.+++++|++. +++||+||+|.++.+++. ....+...+++++++||||.|+++|+|+||++++ + .+
T Consensus 189 ~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~~~~~~~ 268 (409)
T PLN00143 189 YEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGWLVTCDPSGLLQICEI 268 (409)
T ss_pred HHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcCCCccceEEEEeeCchhhhhhHHH
Confidence 9999988764 999999999999886432 2233445578999999999999999999999983 3 33
Q ss_pred HHHHHHhcCC-CCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCe--ecCCCceEEEEEeCC----
Q 014492 302 IEYLWRAKQP-YNVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLN--PYPSYSNFILCEVTS---- 372 (423)
Q Consensus 302 ~~~l~~~~~~-~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~--~~p~~~~~~~~~~~~---- 372 (423)
++.+.+.... ...+.+.|.++..+|++ .+|+++.+++++++++.+.+.|++++... ..|.+|+|+|+++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~p~gg~f~w~~l~~~~~~ 348 (409)
T PLN00143 269 ADSIKKALNPAPFPPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIMCPQKAEGAFFALVKLNLLLLE 348 (409)
T ss_pred HHHHHHHHhccCCCCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCeeEEEEEecchhhcC
Confidence 3444444332 23478899999999975 57899999999999999999998876543 247789999999973
Q ss_pred C-CCHHHHHHHH-HhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 373 G-MDAKKLKDDL-AKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 373 ~-~~~~~l~~~L-~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
+ .+..+++..+ .++||.+.+|..++.++|+||+++.. .+++.+++++|
T Consensus 349 ~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~~~~--~~~l~~al~rl 398 (409)
T PLN00143 349 DIEDDMEFCLKLAKEESLIILPGVTVGLKNWLRITFAVE--QSSLEDGLGRL 398 (409)
T ss_pred CCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEEcCC--HHHHHHHHHHH
Confidence 2 2566777655 58999999998777789999999965 37899999887
No 41
>PRK07324 transaminase; Validated
Probab=100.00 E-value=6.3e-47 Score=369.83 Aligned_cols=331 Identities=22% Similarity=0.238 Sum_probs=279.5
Q ss_pred HhCCCCCCeeEcCCCCCCCCCCHHHHHHHhc-CC-CCCCCCC-cchHHHHHHHHHHhC-CCCCcEEEeCCHHHHHHHHHH
Q 014492 89 QLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPD-PESRRLRAALAKDSG-LESDHILVGCGADELIDLIMR 164 (423)
Q Consensus 89 ~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~Y~~-~g~~~lr~~ia~~~g-~~~~~i~~t~G~~~al~~~~~ 164 (423)
+++..+.++++|+.+++++.+++.+ +++.+ +. ....|+. .|.++||++++++++ +++++|++|+|+++++.+++.
T Consensus 20 ~~~~~~~~~~~~~~~e~~~~~~~~~-~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~vi~t~G~~~al~~~~~ 98 (373)
T PRK07324 20 TYDIAESCIDSLTLEELLALAGKNP-EAFYQELGQKKLTYGWIEGSPEFKEAVASLYQNVKPENILQTNGATGANFLVLY 98 (373)
T ss_pred ccccccCCCCCCcHHHHHhccCcch-HHHHHHHhcCCccCCCCCCCHHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHH
Confidence 3455677899999999998887777 55543 22 2356744 589999999999984 788999999999999999999
Q ss_pred HhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHH
Q 014492 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK 242 (423)
Q Consensus 165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~ 242 (423)
+++++||+|+++.|+|..+...++..|++++.+|.+ +++.+|++++++.+. .++|+|++++||||||.+++.+++++
T Consensus 99 ~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~-~~~kli~i~~p~NPtG~~~~~~~l~~ 177 (373)
T PRK07324 99 ALVEPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVR-PNTKLICINNANNPTGALMDRAYLEE 177 (373)
T ss_pred HhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCC-CCCcEEEEeCCCCCCCCCCCHHHHHH
Confidence 999999999999999999999999999999999965 356789999999886 68999999999999999999877777
Q ss_pred HHcC----CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC--CCCcH
Q 014492 243 ILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSV 316 (423)
Q Consensus 243 i~~~----~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~--~~~~~ 316 (423)
|++. |+++|+||+|.++.+++.........+++|+++||||.||++|+|+||+++++++++++.+.+.. ++.+.
T Consensus 178 i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~~~~~~~I~~~s~SK~~~~~G~RiG~i~~~~~li~~~~~~~~~~~~~~~~ 257 (373)
T PRK07324 178 IVEIARSVDAYVLSDEVYRPLDEDGSTPSIADLYEKGISTNSMSKTYSLPGIRVGWIAANEEVIDILRKYRDYTMICAGV 257 (373)
T ss_pred HHHHHHHCCCEEEEEccccccccCCCCCChhhccCCEEEEecchhhcCCccceeEEEecCHHHHHHHHHHhCcEEecCCh
Confidence 7653 99999999999987654333333346788999999999999999999999999999999988764 56788
Q ss_pred HHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCe-ecCCCceEEEEEeCCCCCHHHHHHHHH-hCCcEEEeC
Q 014492 317 AAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSGMDAKKLKDDLA-KMGVMIRHY 393 (423)
Q Consensus 317 ~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~~~~~~~~~~~~~~~l~~~L~-~~gI~v~~~ 393 (423)
+.|.++..+|++ ..++++.++.++++++.+.+.|++.+++. +.|.+|+|.|+.++.+.+..+++++|. ++||.+.||
T Consensus 258 ~~q~~a~~~l~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~~~i~~~~~~~~~~~~~~ll~~~gv~v~pg 337 (373)
T PRK07324 258 FDDMLASLALEHRDAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTSFVKLDVDMPSEDFCLKLLKETGVLLVPG 337 (373)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceEEEEEEeCCCCCHHHHHHHHHHhcCEEEECc
Confidence 899999999987 45788889999999999999998876554 567888898988876678899999976 789999999
Q ss_pred CCCCCCCeEEEEecChhhHHHHHHHHhhhC
Q 014492 394 NNKELKGYVRVSVGKPEHTDALMECLMHLY 423 (423)
Q Consensus 394 ~~~~~~~~iRis~~~~~~~~~l~~al~~l~ 423 (423)
+.++.++++||+++.. .+.|.+++++|+
T Consensus 338 ~~F~~~~~iRis~~~~--~~~l~~~l~rl~ 365 (373)
T PRK07324 338 NRFDLEGHVRIGYCCD--TETLKKGLKKLS 365 (373)
T ss_pred cccCCCCeEEEEecCC--HHHHHHHHHHHH
Confidence 8877789999999975 478999998873
No 42
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=100.00 E-value=2.7e-46 Score=362.61 Aligned_cols=322 Identities=43% Similarity=0.737 Sum_probs=283.2
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeE
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKI 173 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~V 173 (423)
.++|+|+.|+++++++|.+++++.+. .....|+++..+++|+++++++++++++|++|+|+++++..++..++++||+|
T Consensus 19 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~~~~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~~~l~~~gd~v 98 (346)
T TIGR01141 19 KEVIKLNSNENPFGPPPKAKEALRAEADKLHRYPDPDPAELKQALADYYGVDPEQILLGNGSDEIIELLIRAFLEPGDAV 98 (346)
T ss_pred CceEEccCCCCCCCCCHHHHHHHHHhHHHhhcCCCCCHHHHHHHHHHHhCcChHHEEEcCCHHHHHHHHHHHhcCCCCEE
Confidence 57999999999999999999999874 23367887767899999999999989999999999999999999999999999
Q ss_pred EEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC---CCEE
Q 014492 174 VDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PILV 250 (423)
Q Consensus 174 l~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~---~~~l 250 (423)
++++|+|+.+...++..|++++.++.++++.+|++++++.+. +++++|++++|+||||.+++.+++.++++. ++++
T Consensus 99 ~~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~i 177 (346)
T TIGR01141 99 LVPPPTYSMYEISAKIHGAEVVKVPLDEDGQLDLEDILVAID-DKPKLVFLCSPNNPTGNLLSRSDIEAVLERTPEDALV 177 (346)
T ss_pred EEcCCCHHHHHHHHHHcCCeEEEeccCCCCCCCHHHHHHhcC-CCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEE
Confidence 999999999988889999999999987777899999999875 689999999999999999999999999986 8999
Q ss_pred EEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCcHHHHHHHHHHhCChH
Q 014492 251 VLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPI 330 (423)
Q Consensus 251 i~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~ 330 (423)
|+||+|.++.............+++++++|+||.||++|+|+||+++++++++++......++.+.++|.++..++++.+
T Consensus 178 i~D~~y~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 257 (346)
T TIGR01141 178 VVDEAYGEFSGEPSTLPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANAEIIDALNKVRAPFNLSRLAQAAAIAALRDDD 257 (346)
T ss_pred EEECchhhhcCCccHHHHHhhCCCEEEEehhhHhhhchhhhceeeecCHHHHHHHHhccCCCCCCHHHHHHHHHHhCCHH
Confidence 99999998775433333444456889999999999999999999999999999998887788899999999999998877
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC-CCCCeEEEEecCh
Q 014492 331 YLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK-ELKGYVRVSVGKP 409 (423)
Q Consensus 331 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~-~~~~~iRis~~~~ 409 (423)
+.++.+++++++++++.+.|++++++.+.|..++|+|++++. +++++.+.|.++||.+.++..+ ..++++||+++++
T Consensus 258 ~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~~~~--~~~~~~~~L~~~gI~v~~g~~f~~~~~~iRls~~~~ 335 (346)
T TIGR01141 258 FIEKTVEEINAERERLYDGLKKLPGLEVYPSDANFVLIRFPR--DADALFEALLEKGIIVRDLNSYPGLPNCLRITVGTR 335 (346)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCEECCCcCCEEEEecCC--CHHHHHHHHHHCCeEEEeCCCcCCCCCeEEEecCCH
Confidence 888999999999999999999886566778889999999974 7889999999999999998753 2378999999987
Q ss_pred hhHHHHHHHH
Q 014492 410 EHTDALMECL 419 (423)
Q Consensus 410 ~~~~~l~~al 419 (423)
++.+++.++|
T Consensus 336 ~~i~~~~~~l 345 (346)
T TIGR01141 336 EENDRFLAAL 345 (346)
T ss_pred HHHHHHHHHh
Confidence 7766666655
No 43
>PRK03321 putative aminotransferase; Provisional
Probab=100.00 E-value=1.9e-46 Score=364.51 Aligned_cols=320 Identities=34% Similarity=0.578 Sum_probs=277.6
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeE
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKI 173 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~V 173 (423)
.++|+|+.|++++++++.+.+++.+. .....||+.|.+++|+++++++++++++|++|+|+++++..++..++++||.|
T Consensus 22 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~g~~~lr~~ia~~~~~~~~~I~~~~G~~~~l~~~~~~~~~~gd~V 101 (352)
T PRK03321 22 PGAIKLSSNETPFGPLPSVRAAIARAAAGVNRYPDMGAVELRAALAEHLGVPPEHVAVGCGSVALCQQLVQATAGPGDEV 101 (352)
T ss_pred ccceeccCCCCCCCCCHHHHHHHHHHHHhcCcCCCCcHHHHHHHHHHHhCcCHHHEEECCCHHHHHHHHHHHhcCCCCEE
Confidence 35799999999999999999998763 23356888899999999999999999999999999999999999999999999
Q ss_pred EEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC---CCEE
Q 014492 174 VDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PILV 250 (423)
Q Consensus 174 l~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~---~~~l 250 (423)
+++.|+|..|...++..|++++.+|.++++++|++++++.++ .+++++++++||||||.+++.+++.++++. ++++
T Consensus 102 li~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~i 180 (352)
T PRK03321 102 IFAWRSFEAYPILVQVAGATPVQVPLTPDHTHDLDAMAAAIT-DRTRLIFVCNPNNPTGTVVTPAELARFLDAVPADVLV 180 (352)
T ss_pred EeCCCCHHHHHHHHHHcCCEEEEccCCCCCCCCHHHHHHhhc-cCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEE
Confidence 999999999988889999999999987567899999999996 589999999999999999999999999985 8999
Q ss_pred EEccCCccccCCCc---hhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCcHHHHHHHHHHhC
Q 014492 251 VLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQ 327 (423)
Q Consensus 251 i~Deay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~ 327 (423)
|+||+|.+|.+++. ........+++++++||||.||++|+|+||+++++++++.+.+....++.+.++|.++.++|.
T Consensus 181 i~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~~~~~~~s~~~q~~a~~~l~ 260 (352)
T PRK03321 181 VLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHPEVIAALRKVAVPFSVNSLAQAAAIASLA 260 (352)
T ss_pred EEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCCHHHHHHHHHhcCCCCCCHHHHHHHHHHhc
Confidence 99999999876442 223344567999999999999999999999999999999999887778999999999999997
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec
Q 014492 328 NPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG 407 (423)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~ 407 (423)
..+.+.+..+.+.++++++.+.|++.++ .+.+++|+|+|++++ .+..++.+.|.++||.+++++ .++|||+++
T Consensus 261 ~~~~~~~~~~~~~~~r~~~~~~L~~~~~-~~~~~~g~~i~i~l~--~~~~~~~~~l~~~gI~v~~~~----~~~iRi~~~ 333 (352)
T PRK03321 261 AEDELLERVDAVVAERDRVRAALRAAGW-TVPPSQANFVWLPLG--ERTADFAAAAAEAGVVVRPFA----GEGVRVTIG 333 (352)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCC-ccCCCCCCEEEEeCC--CCHHHHHHHHHHCCEEEEccC----CCcEEEeeC
Confidence 7555555556666778889999988764 445667899999985 367889999999999999853 357999999
Q ss_pred ChhhHHHHHHHHhhh
Q 014492 408 KPEHTDALMECLMHL 422 (423)
Q Consensus 408 ~~~~~~~l~~al~~l 422 (423)
..++++++.++++++
T Consensus 334 ~~~~~~~~~~al~~~ 348 (352)
T PRK03321 334 APEENDAFLRAARAW 348 (352)
T ss_pred CHHHHHHHHHHHHHH
Confidence 999999999999875
No 44
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=4e-46 Score=378.43 Aligned_cols=351 Identities=21% Similarity=0.281 Sum_probs=271.6
Q ss_pred HHHHhcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCCC---CCCCCHHHHHHHhc-CCCCCCCCCc-chHHHHHHHHHH
Q 014492 67 IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANEN---PYGPPPEVREALGQ-LKFPYIYPDP-ESRRLRAALAKD 141 (423)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~---~~~~~~~v~~al~~-~~~~~~Y~~~-g~~~lr~~ia~~ 141 (423)
.++++..+.++ ....+...+++....+.++|+|+.|++ ++++++++.+++.+ +....+|++. |..+||++|+++
T Consensus 119 ~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~~~~Y~~~~G~~~lReaia~~ 197 (517)
T PRK13355 119 KSHKLDNVLYD-VRGPVVDEANRMEAAGTHILKLNIGNPAPFGFRTPDEVVYDMAQQLTDTEGYSDSKGLFSARKAIMQY 197 (517)
T ss_pred hhHHhhccCcc-HHHHHHHHHHHHHHcCCCeEEecCcCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCcChHHHHHHHHHH
Confidence 45555555543 222233445555556678999999765 46668888888865 3344679765 799999999999
Q ss_pred h------CCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHH
Q 014492 142 S------GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADA 213 (423)
Q Consensus 142 ~------g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~ 213 (423)
+ ++++++|++|+|+++++.+++.+++++||+|+++.|+|+.|...++..|++++.++.+ ++|.+|++++++.
T Consensus 198 ~~~~~~~~~~~~~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~ 277 (517)
T PRK13355 198 AQLKGLPNVDVDDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDIDDIRSK 277 (517)
T ss_pred HHhcCCCCCChhHEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCCHHHHHHh
Confidence 8 6789999999999999999999999999999999999999999999999999999864 3588999999999
Q ss_pred hhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhccCCcEEEEccChhhhc
Q 014492 214 VEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAG 286 (423)
Q Consensus 214 i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~g 286 (423)
+. .++|+|+++|||||||.+++.+++++|++. +++||+||+|.+|.+++. ....+.....+++++||||.|+
T Consensus 278 ~~-~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~~ 356 (517)
T PRK13355 278 IT-SRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHM 356 (517)
T ss_pred cC-cCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecchhhcc
Confidence 86 689999999999999999999888888764 899999999999886542 1222222234677899999999
Q ss_pred ccCcccccccc--CHH----HHHHHHHhcCC-CCCcHHHHHHHHHHhCCh----HHHHHHHHHHHHHHHHHHHHHccCCC
Q 014492 287 LAGLRVGYGAF--PLS----IIEYLWRAKQP-YNVSVAAEVAACAALQNP----IYLEKVKEALIKERERLFKLLKDVPF 355 (423)
Q Consensus 287 ~~G~R~G~i~~--~~~----~~~~l~~~~~~-~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~~~l~~~L~~~~~ 355 (423)
++|+|+||+++ +++ +++.+...... ++.+.++|.++..+|... +++.+. +++.++++++.+.|+++++
T Consensus 357 ~~G~RiG~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~-~~~~~~r~~l~~~L~~~~g 435 (517)
T PRK13355 357 IAGYRIGWMILSGNKRIAKDYIEGLNMLANMRLCSNVPAQSIVQTALGGHQSVKDYLVPG-GRVYEQRELVYNALNAIPG 435 (517)
T ss_pred CcccceEEEEeeCchhhHHHHHHHHHHHhcCcCCcChHHHHHHHHHhcCCccHHHHHHHH-HHHHHHHHHHHHHHhcCCC
Confidence 99999999995 344 34444433332 678899999999999752 455554 3445678999999998865
Q ss_pred Cee-cCCCceEEEEEeCCC----CCHHHHHHH-HHhCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014492 356 LNP-YPSYSNFILCEVTSG----MDAKKLKDD-LAKMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 356 ~~~-~p~~~~~~~~~~~~~----~~~~~l~~~-L~~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
+.+ .|.+++|+|++++.+ .+..+++.. |.++||.|.+|..++ .++|+||+++.. .+.|.+++++|
T Consensus 436 ~~~~~p~g~fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~~~--~~~l~~a~~rl 508 (517)
T PRK13355 436 ISAVKPKAAFYIFPKIDVKKFNIHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYLPR--LEDLEDAMDRL 508 (517)
T ss_pred cccCCCCeeeEEEeecCcccCCCCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeCCC--HHHHHHHHHHH
Confidence 554 567778889888642 245566554 558999999988753 578999999754 47899999887
No 45
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=2.9e-46 Score=367.18 Aligned_cols=328 Identities=23% Similarity=0.353 Sum_probs=274.5
Q ss_pred CCCCCeeEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCCc-chHHHHHHHHHHh----CC--CCC-cEEEeCCHHHHHH
Q 014492 92 RKPEDIVKIDANENPYGPPPEVREALGQL-K--FPYIYPDP-ESRRLRAALAKDS----GL--ESD-HILVGCGADELID 160 (423)
Q Consensus 92 ~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~Y~~~-g~~~lr~~ia~~~----g~--~~~-~i~~t~G~~~al~ 160 (423)
..+.++++|+.|++++++++.+.+++.+. . ...+|+++ |.++||+++++++ |+ +++ +|++|+|+++++.
T Consensus 26 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~ 105 (383)
T TIGR03540 26 AEGVDVISLGIGDPDLPTPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGIA 105 (383)
T ss_pred hcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHHH
Confidence 34567899999999999899888887762 2 23678765 7899999999986 33 455 6999999999999
Q ss_pred HHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHH
Q 014492 161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE 238 (423)
Q Consensus 161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~ 238 (423)
.+++.++++||.|+++.|+|+.|...++..|++++.+|.+ +++.+|++++++.+. .++++|++||||||||.+++.+
T Consensus 106 ~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~-~~~~~v~i~~P~NPtG~~~~~~ 184 (383)
T TIGR03540 106 HIPLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIA-KKAKLMFINYPNNPTGAVAPLK 184 (383)
T ss_pred HHHHHhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhcc-ccceEEEEeCCCCCcCccCCHH
Confidence 9999999999999999999999999999999999999974 356789999999886 6899999999999999999998
Q ss_pred HHHHHHcC----CCEEEEccCCccccCCCc-hh--hhhc-cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC
Q 014492 239 DLLKILEM----PILVVLDEAYTEFSGLES-RM--EWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ 310 (423)
Q Consensus 239 ~l~~i~~~----~~~li~Deay~~~~~~~~-~~--~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~ 310 (423)
++++|++. +++||+||+|.++.+.+. .. ..+. ..+++++++||||.||++|+|+||+++++++++++.....
T Consensus 185 ~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~~~~l~~~~~~~~~ 264 (383)
T TIGR03540 185 FFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGNADLIAGLGKVKT 264 (383)
T ss_pred HHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeCCHHHHHHHHHHHH
Confidence 88888764 899999999998876431 11 1222 2467899999999999999999999999999998887665
Q ss_pred C--CCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCCCCCHHHHHHHHH-h
Q 014492 311 P--YNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTSGMDAKKLKDDLA-K 385 (423)
Q Consensus 311 ~--~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~~~~~~~l~~~L~-~ 385 (423)
. .+.+.+.|.++..++++ .+|+++.++.++++++.+.+.|++.+ +.+ .|.+++|+|++++++.++.++++.|. +
T Consensus 265 ~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~ll~~ 343 (383)
T TIGR03540 265 NVDSGVFQAIQYAAIAALNGPQDVVKEIRKIYQRRRDLLLEALKKIG-IDVEKPKATFYVWVPVPEGYTSAEFAARLLEE 343 (383)
T ss_pred hcccCCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCC-CEecCCCcceEEEEECCCCCCHHHHHHHHHHH
Confidence 3 46677889999999987 58889999999999999999999885 443 45678889999987788899999876 7
Q ss_pred CCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhhC
Q 014492 386 MGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHLY 423 (423)
Q Consensus 386 ~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l~ 423 (423)
+||.++++..+. .++++||+++.++ +++.+++++|+
T Consensus 344 ~gi~v~~g~~f~~~~~~~~Ris~~~~~--~~l~~~l~~l~ 381 (383)
T TIGR03540 344 TGVVVTPGVGFGEYGEGYIRISLTVPD--ERLEEAVARIK 381 (383)
T ss_pred CCEEEecchhhCccCCCeEEEEecCCH--HHHHHHHHHHh
Confidence 899999987643 3579999998653 78999998873
No 46
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.1e-46 Score=368.03 Aligned_cols=331 Identities=24% Similarity=0.311 Sum_probs=271.5
Q ss_pred HhCCCCCCeeEcCCCCCCCCCCHHHHHHHhc-CC--CCCCCCCc-chHHHHHHHHHHh----C--CCCC-cEEEeCCHHH
Q 014492 89 QLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCGADE 157 (423)
Q Consensus 89 ~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~Y~~~-g~~~lr~~ia~~~----g--~~~~-~i~~t~G~~~ 157 (423)
+....+.++++|+.+.++.++++++.+++.+ +. ....|+++ |.++||+++++++ | ++++ +|++|+|+++
T Consensus 29 ~~~~~g~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~ 108 (394)
T PRK05942 29 RAREQGLDLIDLGMGNPDGAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKE 108 (394)
T ss_pred HHHhcCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHH
Confidence 3334456789999987777666666665543 22 22678765 7899999999987 4 4677 5899999999
Q ss_pred HHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCC
Q 014492 158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII 235 (423)
Q Consensus 158 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~ 235 (423)
++..++.+++++||+|++++|+|+.+...++..|++++.+|.+ ++|.+|++++++.+. +++|+|+++|||||||.++
T Consensus 109 al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~k~i~l~~P~NPtG~~~ 187 (394)
T PRK05942 109 GLTHLALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVA-QQAKILYFNYPSNPTTATA 187 (394)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhcc-ccceEEEEcCCCCCCCCcC
Confidence 9999999999999999999999999988888899999999975 356799999999886 6899999999999999999
Q ss_pred CHHHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhcc-CCcEEEEccChhhhcccCccccccccCHHHHHHHHH
Q 014492 236 NDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR 307 (423)
Q Consensus 236 ~~~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~-~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~ 307 (423)
+.+++++|++. +++||+||+|.++.+++. ....+.. .+++++++||||.||++|+|+||+++++++++.+..
T Consensus 188 s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~~~l~~~l~~ 267 (394)
T PRK05942 188 PREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGNRHIIQGLRT 267 (394)
T ss_pred CHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeecCHHHHHHHHH
Confidence 99988887664 999999999998876432 2222222 356789999999999999999999999999999987
Q ss_pred hcC--CCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHH
Q 014492 308 AKQ--PYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA 384 (423)
Q Consensus 308 ~~~--~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~ 384 (423)
... .++.+.++|.++..+|+. .+++++.+++++++++.+.+.|++.+.....|.+++|+|++++.+.++.++...+.
T Consensus 268 ~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~l 347 (394)
T PRK05942 268 LKTNLDYGIFSALQKAAETALQLPDSYLQQVQERYRTRRDFLIQGLGELGWNIPPTKATMYLWVPCPVGMGSTDFALNVL 347 (394)
T ss_pred HHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeeeEEEEECCCCCCHHHHHHHHH
Confidence 765 467888999999999975 56888999999999999999998876433345677799999987777888887655
Q ss_pred -hCCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 385 -KMGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 385 -~~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
++||.+.++..+ ..++|+||+++.. .++|.++++++
T Consensus 348 ~~~gV~v~~g~~f~~~~~~~iRis~~~~--~~~l~~~l~~l 386 (394)
T PRK05942 348 QKTGVVVTPGNAFGEGGEGYVRISLIAD--CDRLGEALDRL 386 (394)
T ss_pred HHCCEEEeCChhhCcCCCCeEEEEecCC--HHHHHHHHHHH
Confidence 899999998764 3468999999853 58899999886
No 47
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=2.5e-46 Score=363.14 Aligned_cols=324 Identities=24% Similarity=0.372 Sum_probs=271.6
Q ss_pred eeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCc-chHHHHHHHHHHh----C--CCCC-cEEEeCCHHHHHHHHHHHhc
Q 014492 97 IVKIDANENPYGPPPEVREALGQL-KFPYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCGADELIDLIMRCVL 167 (423)
Q Consensus 97 ~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~-g~~~lr~~ia~~~----g--~~~~-~i~~t~G~~~al~~~~~~l~ 167 (423)
+++|+.+.+++++++++.+++.+. .....|+++ |..+||+++++++ | ++++ +|++|+|+++++..++..++
T Consensus 2 ~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~~ 81 (350)
T TIGR03537 2 LFDFGTGDPKEPTPPFIRKALIDAVPEVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFI 81 (350)
T ss_pred eEeccCCCCCCCCCHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHHc
Confidence 589999999999899999998863 334678775 7899999999986 6 4676 99999999999999999999
Q ss_pred CCC---CeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHH
Q 014492 168 DPG---DKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK 242 (423)
Q Consensus 168 ~~g---d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~ 242 (423)
++| |.|+++.|+|..|...++..|++++.++.+ +++.+|++++++++. .++|++++++||||||.+++.+++++
T Consensus 82 ~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~~~i~i~~p~NPtG~~~~~~~~~~ 160 (350)
T TIGR03537 82 DPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSIL-EETKIVWINYPHNPTGATAPRSYLKE 160 (350)
T ss_pred CCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhh-hccEEEEEeCCCCCcCcccCHHHHHH
Confidence 887 699999999999999999999999999974 357789999999986 58999999999999999999888888
Q ss_pred HHcC----CCEEEEccCCccccCCCchhhhh-ccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCC--Cc
Q 014492 243 ILEM----PILVVLDEAYTEFSGLESRMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN--VS 315 (423)
Q Consensus 243 i~~~----~~~li~Deay~~~~~~~~~~~~~-~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~--~~ 315 (423)
|++. |+++|+||+|.++.++....... ...+++++++||||.+|++|+|+||+++++++++.+......++ .+
T Consensus 161 l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~ 240 (350)
T TIGR03537 161 TIAMCREHGIILCSDECYTEIYFGEPPHSALEVGIENVLAFHSLSKRSGMTGYRSGFVAGDEKLISFLRKLRANFGVASP 240 (350)
T ss_pred HHHHHHHcCcEEEEeccccccccCCCCCchhhcCcCCEEEEeecccccCCccccceeeecCHHHHHHHHHHHHhhccCCC
Confidence 7664 99999999999876543221111 13578999999999999999999999999999998887765543 45
Q ss_pred HHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC
Q 014492 316 VAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN 395 (423)
Q Consensus 316 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~ 395 (423)
.+.|.++..++.+.+|+++.+++++++++.+.+.|++.+.....|.+++|+|+++|++.++.++++.|.++||.|.++..
T Consensus 241 ~~~q~~~~~~l~~~~~~~~~r~~l~~~~~~~~~~l~~~g~~~~~~~g~~~~~~~~~~~~~~~~l~~~L~~~gv~v~~g~~ 320 (350)
T TIGR03537 241 DFVQAAAKAAWSDDNHVLERRKIFKRKRDLFIEFFNKVGLEYLYPDATFYLWVKVPSGIDAKDYALRLLENGIVVAPGEN 320 (350)
T ss_pred HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeEEEEEEECCCCCCHHHHHHHHHHCCEEEcCchh
Confidence 56788888888888889999999999999999999888643345667788999998777889999999999999999876
Q ss_pred C--CCCCeEEEEecChhhHHHHHHHHhhhC
Q 014492 396 K--ELKGYVRVSVGKPEHTDALMECLMHLY 423 (423)
Q Consensus 396 ~--~~~~~iRis~~~~~~~~~l~~al~~l~ 423 (423)
+ ..++++||+++.. .+++.+++++++
T Consensus 321 f~~~~~~~~Ri~~~~~--~~~~~~~l~~~~ 348 (350)
T TIGR03537 321 FGSGEEGYVRVALVPT--LEECEEALRLWE 348 (350)
T ss_pred hCCCCCCEEEEEecCC--HHHHHHHHHHHh
Confidence 4 3368999999743 377888888763
No 48
>PRK07908 hypothetical protein; Provisional
Probab=100.00 E-value=3.6e-46 Score=361.90 Aligned_cols=316 Identities=25% Similarity=0.348 Sum_probs=270.3
Q ss_pred CCCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCc-chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCC
Q 014492 94 PEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD 171 (423)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~-g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd 171 (423)
..+++||+.|+|++++++.+++++.+. .....||++ |..++|+++++++++++++|++|+|+++++.++++ +.+|
T Consensus 21 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~~~I~it~Ga~~al~~~~~--l~~~- 97 (349)
T PRK07908 21 GPGLLDFAVNVRHDTPPEWLRERLAARLGDLAAYPSTEDERRARAAVAARHGRTPDEVLLLAGAAEGFALLAR--LRPR- 97 (349)
T ss_pred CCCeEEecCCCCCCCCCHHHHHHHHHHhhHhhcCCCccchHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHh--cCCC-
Confidence 467899999999999999999998873 333578765 78999999999999999999999999999999988 4665
Q ss_pred eEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcCCCEEE
Q 014492 172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVV 251 (423)
Q Consensus 172 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~li 251 (423)
.++++.|+|..+...++..|++++.+|.++++.+|++.+ . .++++++++|||||||.+++.+++.++++.+.++|
T Consensus 98 ~viv~~P~y~~~~~~~~~~G~~i~~v~~~~~~~~d~~~l----~-~~~~~i~l~np~NPTG~~~~~~~l~~l~~~~~~iI 172 (349)
T PRK07908 98 RAAVVHPSFTEPEAALRAAGIPVHRVVLDPPFRLDPAAV----P-DDADLVVIGNPTNPTSVLHPAEQLLALRRPGRILV 172 (349)
T ss_pred eEEEeCCCChHHHHHHHHcCCEEEeeccCcccCcChhHh----c-cCCCEEEEcCCCCCCCCCcCHHHHHHHHhcCCEEE
Confidence 567789999999999999999999999876688998855 2 47899999999999999999999999998888999
Q ss_pred EccCCccccCCCc-hhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCcHHHHHHHHHHhCC--
Q 014492 252 LDEAYTEFSGLES-RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQN-- 328 (423)
Q Consensus 252 ~Deay~~~~~~~~-~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~-- 328 (423)
+||+|.++..+.. .... ...+++++++||||.||++|+|+||+++++++++.+.+....++.+.+.+.++..++.+
T Consensus 173 vDe~y~~~~~~~~~~l~~-~~~~~~i~i~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 251 (349)
T PRK07908 173 VDEAFADAVPGEPESLAG-DDLPGVLVLRSLTKTWSLAGLRVGYALGAPDVLARLTRGRAHWPVGTLQLEAIAACCAPRA 251 (349)
T ss_pred EECcchhhccCCcccccc-ccCCCEEEEeecccccCCccceeeeeecCHHHHHHHHhcCCCCCccHHHHHHHHHHhcccc
Confidence 9999998764321 1111 23568999999999999999999999999999999988877788888888888888774
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCC--CCCeEEEE
Q 014492 329 PIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKE--LKGYVRVS 405 (423)
Q Consensus 329 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~--~~~~iRis 405 (423)
.+++++.+++++++++++.+.|++++ +.+ .|++++|+|+++++ .+++.+.|+++||.++++..+. .+++|||+
T Consensus 252 ~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~~p~~g~~~~~~~~~---~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis 327 (349)
T PRK07908 252 VAEAAADAARLAADRAEMVAGLRAVG-ARVVDPAAAPFVLVRVPD---AELLRKRLRERGIAVRRGDTFPGLDPDYLRLA 327 (349)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCC-cEeccCCCceEEEEECCc---HHHHHHHHHhCCEEEEECCCCCCCCCCeEEEE
Confidence 36788899999999999999998884 454 45899999999973 5788888889999999987642 36899999
Q ss_pred ecChhhHHHHHHHHhhh
Q 014492 406 VGKPEHTDALMECLMHL 422 (423)
Q Consensus 406 ~~~~~~~~~l~~al~~l 422 (423)
++.++++++|.++|+++
T Consensus 328 ~~~~~~~~~l~~al~~~ 344 (349)
T PRK07908 328 VRPRAEVPVLVQALAEI 344 (349)
T ss_pred eCCCccHHHHHHHHHHH
Confidence 99988999999999876
No 49
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=3.5e-46 Score=367.19 Aligned_cols=331 Identities=23% Similarity=0.343 Sum_probs=277.0
Q ss_pred HhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcC-C-CCCCCCCc-chHHHHHHHHHHh----C--CCCCcEEEeCCHHHHH
Q 014492 89 QLGRKPEDIVKIDANENPYGPPPEVREALGQL-K-FPYIYPDP-ESRRLRAALAKDS----G--LESDHILVGCGADELI 159 (423)
Q Consensus 89 ~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Y~~~-g~~~lr~~ia~~~----g--~~~~~i~~t~G~~~al 159 (423)
.....+.++++|+.+++++++++.+.+++.+. . ....|+++ |.++||+++++++ | +++++|++|+|+++++
T Consensus 24 ~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al 103 (388)
T PRK07337 24 ALERAGRDIIHMGIGEPDFTAPEPVVEAAARALRRGVTQYTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAAL 103 (388)
T ss_pred HHHhcCCCEEEeCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHH
Confidence 33344567899999999998889888888763 2 23568654 7899999999986 3 5789999999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCH
Q 014492 160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND 237 (423)
Q Consensus 160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~ 237 (423)
.+++..++++||+|+++.|+|..+...++..|++++.+|.+ +++.+|++++++.+. +++++|++++||||||.+++.
T Consensus 104 ~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~NPtG~~~~~ 182 (388)
T PRK07337 104 LLACLALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWG-ERTRGVLLASPSNPTGTSIAP 182 (388)
T ss_pred HHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcC-ccceEEEEECCCCCCCcCcCH
Confidence 99999999999999999999999998888999999999975 357899999999986 689999999999999999999
Q ss_pred HHHHHHHcC----CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC--
Q 014492 238 EDLLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP-- 311 (423)
Q Consensus 238 ~~l~~i~~~----~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~-- 311 (423)
+++++|++. ++++|+||+|.++.+.+.........+++++++||||.||++|+|+||+++++++++.+.+....
T Consensus 183 ~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~~~~~~l~~~l~~~~~~~~ 262 (388)
T PRK07337 183 DELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSALSLGDDVITINSFSKYFNMTGWRLGWLVVPEALVGTFEKLAQNLF 262 (388)
T ss_pred HHHHHHHHHHHHCCCEEEEeccccccccCCCCcChhhccCCEEEEEechhhcCCchhheeeeecCHHHHHHHHHHHHHhc
Confidence 998888764 89999999999887654322223335789999999999999999999999999999998877654
Q ss_pred CCCcHHHHHHHHHHhCCh--HHHHHHHHHHHHHHHHHHHHHccCCCCe-ecCCCceEEEEEeCC-----CCCHHHHHHHH
Q 014492 312 YNVSVAAEVAACAALQNP--IYLEKVKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTS-----GMDAKKLKDDL 383 (423)
Q Consensus 312 ~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~~~~~~~~~-----~~~~~~l~~~L 383 (423)
.+.+.+.|.++..++.+. +++++.++.++++++.+.+.|++++... +.|++|+|+|+++++ ..++.++++.|
T Consensus 263 ~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l 342 (388)
T PRK07337 263 ICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESLGFKVPVMPDGAFYVYADCRGVAHPAAGDSAALTQAM 342 (388)
T ss_pred cCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCeeEEEEEecccccCCCCCCHHHHHHHH
Confidence 367889999999998753 4567888999999999999999876432 468899999999974 25778888876
Q ss_pred H-hCCcEEEeCCCCC---CCCeEEEEecChhhHHHHHHHHhhh
Q 014492 384 A-KMGVMIRHYNNKE---LKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 384 ~-~~gI~v~~~~~~~---~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
. ++||.+.++..+. .++|+||+++.. .+.|.+++++|
T Consensus 343 l~~~gv~v~pg~~f~~~~~~~~~Ri~~~~~--~~~l~~~l~rl 383 (388)
T PRK07337 343 LHDAGVVLVPGRDFGPHAPRDYIRLSYATS--MSRLEEAVARL 383 (388)
T ss_pred HHhCCEEEeCchhhCCCCCCCEEEEEecCC--HHHHHHHHHHH
Confidence 5 7899999887643 368999999974 48899999987
No 50
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=6.4e-46 Score=368.34 Aligned_cols=326 Identities=22% Similarity=0.336 Sum_probs=270.4
Q ss_pred CCCeeEcCCCCCC----CCCCHHHHHHHhcC-C--CCCCCCC-cchHHHHHHHHHHh------CCCCCcEEEeCCHHHHH
Q 014492 94 PEDIVKIDANENP----YGPPPEVREALGQL-K--FPYIYPD-PESRRLRAALAKDS------GLESDHILVGCGADELI 159 (423)
Q Consensus 94 ~~~~i~l~~~~~~----~~~~~~v~~al~~~-~--~~~~Y~~-~g~~~lr~~ia~~~------g~~~~~i~~t~G~~~al 159 (423)
+.++|+|+.|++. +++++++.+++.+. . ....|++ .|.+++|+++++++ ++++++|++|+|+++++
T Consensus 51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al 130 (430)
T PLN00145 51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAI 130 (430)
T ss_pred CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHH
Confidence 5689999999885 77788888888762 2 2247865 48899999999997 35789999999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC--CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCH
Q 014492 160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND 237 (423)
Q Consensus 160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~ 237 (423)
.++++.++++||+|++++|+|+.|...+...|++++.++. +++|.+|++++++.++ .++++++++|||||||.+++.
T Consensus 131 ~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~i~i~~P~NPtG~v~~~ 209 (430)
T PLN00145 131 EIIMSVLAQPGANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALAD-ENTVAMVIINPNNPCGSVYSY 209 (430)
T ss_pred HHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhC-cCceEEEEeCCCCCCCCCCCH
Confidence 9999999999999999999999999999999999999884 3568899999999886 689999999999999999999
Q ss_pred HHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhccCCcEEEEccChhhhcccCcccccccc--CHHHHH-----
Q 014492 238 EDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF--PLSIIE----- 303 (423)
Q Consensus 238 ~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~--~~~~~~----- 303 (423)
+++++|++. |++||+||+|.++.++.. ....+...+++++++||||.|++||+|+||+++ ++.+++
T Consensus 210 ~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~~~~~ 289 (430)
T PLN00145 210 EHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRLGWIATCDPNGILKETKVV 289 (430)
T ss_pred HHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEeccccccCCCCeeEEEEEEecchhhhhhhHHH
Confidence 888888653 999999999999886432 222334467899999999999999999999997 444433
Q ss_pred -HHHHhcCCC-CCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCe--ecCCCceEEEEEeCC----C
Q 014492 304 -YLWRAKQPY-NVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLN--PYPSYSNFILCEVTS----G 373 (423)
Q Consensus 304 -~l~~~~~~~-~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~--~~p~~~~~~~~~~~~----~ 373 (423)
.+....... +.+.+.|.++..+|+. .+|+++.++.++++++.+.+.|++++++. ..|++++|+|++++. +
T Consensus 290 ~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~P~ga~y~~v~l~~~~~~~ 369 (430)
T PLN00145 290 DSIRNYLNISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCPHKPEGSMFVMVKLDLSCLSG 369 (430)
T ss_pred HHHHHHhcccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcCCCeeeEEEeccChhhcCC
Confidence 343443332 4678999999999986 47899999999999999999999986655 358999999999863 2
Q ss_pred -CCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 374 -MDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 374 -~~~~~l~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.+..+++..|+ ++||.+.||..++.++|+||+++.+ .+.|.+++++|
T Consensus 370 ~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~~~--~~~l~~al~rl 418 (430)
T PLN00145 370 IKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITFAID--PPSLEDGLERL 418 (430)
T ss_pred CCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCCC--HHHHHHHHHHH
Confidence 25677887666 7899999998877789999999964 48899999887
No 51
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=5.5e-46 Score=367.15 Aligned_cols=328 Identities=21% Similarity=0.305 Sum_probs=268.2
Q ss_pred CCCCCeeEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCCc-chHHHHHHHHHHh----C--CCCC-cEEEeCCHHHHHH
Q 014492 92 RKPEDIVKIDANENPYGPPPEVREALGQL-K--FPYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCGADELID 160 (423)
Q Consensus 92 ~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~Y~~~-g~~~lr~~ia~~~----g--~~~~-~i~~t~G~~~al~ 160 (423)
..+.++|+|+.|++++++++.+.+++.+. . ...+|+++ |..+||+++++++ | ++++ +|++|+|+++++.
T Consensus 27 ~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~ 106 (405)
T PRK09148 27 AAGADIIDLGMGNPDLPTPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFA 106 (405)
T ss_pred hcCCCeEEcCCCCCCCCCCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHH
Confidence 34567899999999998888888887653 2 23678665 7899999999987 4 4676 8999999999999
Q ss_pred HHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCC--CCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHH
Q 014492 161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD--FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE 238 (423)
Q Consensus 161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~ 238 (423)
.++..++++||+|++++|+|..|...++..|++++.+|.+.+ +..++++..+... .+++++++++||||||.+++.+
T Consensus 107 ~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~l~~~~~~~~-~~~~~v~l~~P~NPtG~~~s~~ 185 (405)
T PRK09148 107 NMAQAITAPGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEFFPALERAVRHSI-PKPIALIVNYPSNPTAYVADLD 185 (405)
T ss_pred HHHHHhcCCCCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCCccCHHHHHhhcc-ccceEEEEeCCCCCCCcCCCHH
Confidence 999999999999999999999999999999999999997533 3334444433332 5789999999999999999999
Q ss_pred HHHHHHcC----CCEEEEccCCccccCCCch---hhhhc-cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC
Q 014492 239 DLLKILEM----PILVVLDEAYTEFSGLESR---MEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ 310 (423)
Q Consensus 239 ~l~~i~~~----~~~li~Deay~~~~~~~~~---~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~ 310 (423)
++++|++. +++||+||+|.++.++... ...+. ..+++++++||||.||++|+|+||+++++++++.+.+.+.
T Consensus 186 ~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~~~~~i~~l~~~~~ 265 (405)
T PRK09148 186 FYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVGNERLIAALTRVKS 265 (405)
T ss_pred HHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheeeeeCCHHHHHHHHHHHH
Confidence 88888764 9999999999998764322 22222 2356789999999999999999999999999999987765
Q ss_pred --CCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCC---CCHHHHHHHHH
Q 014492 311 --PYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSG---MDAKKLKDDLA 384 (423)
Q Consensus 311 --~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~---~~~~~l~~~L~ 384 (423)
.++.+.+.|.++..+|++ .+++++.++.++++++.+.+.|++.++....|++|+|+|+++|+. .+..++++.|.
T Consensus 266 ~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g~f~~~~l~~~~~~~~~~~~~~~ll 345 (405)
T PRK09148 266 YLDYGAFTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGRAGWDIPPPAASMFAWAPIPEAFRHLGSLEFSKLLV 345 (405)
T ss_pred HhccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCCeeEEEEEECCCccCCCCHHHHHHHHH
Confidence 467889999999999975 578899999999999999999998764334588999999999853 34678888876
Q ss_pred -hCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014492 385 -KMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 385 -~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
++||.|.++..++ .++|+||+++. +.++|.+++++|
T Consensus 346 ~~~gV~v~pg~~f~~~~~~~~Ri~~~~--~~~~l~~al~~l 384 (405)
T PRK09148 346 EKADVAVAPGVGFGEHGDGYVRIALVE--NEQRIRQAARNI 384 (405)
T ss_pred HhCCEEEeCchhhCCCCCCeEEEEecC--CHHHHHHHHHHH
Confidence 7899999987643 35899999983 358899999876
No 52
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=6.6e-46 Score=367.04 Aligned_cols=328 Identities=20% Similarity=0.279 Sum_probs=274.6
Q ss_pred CCCCeeEcCCCCCC----CCCCHHHHHHHhc-CC--CCCCC-CCcchHHHHHHHHHHhC------CCCCcEEEeCCHHHH
Q 014492 93 KPEDIVKIDANENP----YGPPPEVREALGQ-LK--FPYIY-PDPESRRLRAALAKDSG------LESDHILVGCGADEL 158 (423)
Q Consensus 93 ~~~~~i~l~~~~~~----~~~~~~v~~al~~-~~--~~~~Y-~~~g~~~lr~~ia~~~g------~~~~~i~~t~G~~~a 158 (423)
.+.++|+|+.|+++ +++++.+.+++.+ +. ...+| |..|.+++|++++++++ +++++|++|+|++++
T Consensus 29 ~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~a 108 (409)
T PLN02656 29 NGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQA 108 (409)
T ss_pred cCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHHH
Confidence 45789999999998 8888999998876 22 23578 56689999999999973 678999999999999
Q ss_pred HHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCC
Q 014492 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236 (423)
Q Consensus 159 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~ 236 (423)
+.+++.+++++||+|++++|+|+.|...++..|++++.+|.+ +++.+|++++++.+. .+++++++++||||||.+++
T Consensus 109 l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~P~NPtG~~~s 187 (409)
T PLN02656 109 IDVALSMLARPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALAD-QNTVALVIINPGNPCGNVYS 187 (409)
T ss_pred HHHHHHHHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhc-cCceEEEEECCCCCCCCCCC
Confidence 999999999999999999999999998888899999999963 467899999999886 67899999999999999999
Q ss_pred HHHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhccCCcEEEEccChhhhcccCccccccccC--------HHH
Q 014492 237 DEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP--------LSI 301 (423)
Q Consensus 237 ~~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~--------~~~ 301 (423)
.+++++|++. +++||+||+|.+|.+++. ....+...+++++++||||.|+++|+|+||++++ +++
T Consensus 188 ~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~~~~~~ 267 (409)
T PLN02656 188 YQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSFRDPKI 267 (409)
T ss_pred HHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCcceeEEEEEEeCcccccccHHH
Confidence 9999888764 999999999999886542 2223344578999999999999999999999984 578
Q ss_pred HHHHHHhcCC-CCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCe--ecCCCceEEEEEeCCC---
Q 014492 302 IEYLWRAKQP-YNVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLN--PYPSYSNFILCEVTSG--- 373 (423)
Q Consensus 302 ~~~l~~~~~~-~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~--~~p~~~~~~~~~~~~~--- 373 (423)
++++.+.... .+++.++|.++..+|++ .+++++.+++++++++.+.+.|+++++.. ..|.+|+|+|++++..
T Consensus 268 ~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~~p~gg~~~w~~l~~~~~~ 347 (409)
T PLN02656 268 VERIKKYFDILGGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIPCITCPHKPEGSMAVMVKLNLSLLE 347 (409)
T ss_pred HHHHHHHHhhhcCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCcCCCeEEEEEEecchhhcC
Confidence 8888776554 35788999999999974 46899999999999999999999876443 3578899999998621
Q ss_pred --CCHHHHH-HHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhhC
Q 014492 374 --MDAKKLK-DDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHLY 423 (423)
Q Consensus 374 --~~~~~l~-~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l~ 423 (423)
.+..++. +.|.++||.+.|++.++.++++||+++.. .++|.+++++|+
T Consensus 348 ~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~~~--~e~l~eal~rl~ 398 (409)
T PLN02656 348 DISDDIDFCFKLAREESVIILPGTAVGLKNWLRITFAAD--PSSLEEALGRIK 398 (409)
T ss_pred CCCCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeCCC--HHHHHHHHHHHH
Confidence 2344554 55568999999998777789999999974 488999999873
No 53
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=7e-46 Score=367.35 Aligned_cols=327 Identities=20% Similarity=0.289 Sum_probs=273.8
Q ss_pred CCCCeeEcCCCCCC----CCCCHHHHHHHhcC-C--CCCCCCCc-chHHHHHHHHHHhC------------CCCCcEEEe
Q 014492 93 KPEDIVKIDANENP----YGPPPEVREALGQL-K--FPYIYPDP-ESRRLRAALAKDSG------------LESDHILVG 152 (423)
Q Consensus 93 ~~~~~i~l~~~~~~----~~~~~~v~~al~~~-~--~~~~Y~~~-g~~~lr~~ia~~~g------------~~~~~i~~t 152 (423)
.+.++|+|+.|.++ +.+++.+.+++.+. . ...+|+++ |..+||++++++++ +++++|++|
T Consensus 31 ~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it 110 (412)
T PTZ00433 31 SPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVLC 110 (412)
T ss_pred CCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChhhEEEe
Confidence 45688999999876 56788888888762 2 23679776 79999999999985 678999999
Q ss_pred CCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCC
Q 014492 153 CGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNP 230 (423)
Q Consensus 153 ~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NP 230 (423)
+|+++++.+++..++++||+|+++.|+|..|...++..|++++.+|.+ +++++|++++++.+. .++++|+++|||||
T Consensus 111 ~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~-~~~~~i~~~~p~NP 189 (412)
T PTZ00433 111 SGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLVD-DRTKALIMTNPSNP 189 (412)
T ss_pred CChHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHHhc-cCceEEEEeCCCCC
Confidence 999999999999999999999999999999999999999999999964 467999999999886 58999999999999
Q ss_pred cCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhccCCcEEEEccChhhhcccCcccccccc--C---
Q 014492 231 DGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF--P--- 298 (423)
Q Consensus 231 tG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~--~--- 298 (423)
||.+++.+++++|++. |++||+||+|.+|.+++. ....+....++++++||||.||++|+|+||+++ +
T Consensus 190 tG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i~~~p~~~ 269 (412)
T PTZ00433 190 CGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNLVVPGWRLGWLLLVDPHGN 269 (412)
T ss_pred CCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCceEEEccchhhcCCCCeeEEEEEEeCCccc
Confidence 9999999999888764 999999999999876432 122222334689999999999999999999997 2
Q ss_pred -HHHHHHHHHhcC-CCCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCe-ecCCCceEEEEEeCC-
Q 014492 299 -LSIIEYLWRAKQ-PYNVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTS- 372 (423)
Q Consensus 299 -~~~~~~l~~~~~-~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~~~~~~~~~- 372 (423)
+++++.+.+... .++++.+.|.++..++.+ .+|+++.++.++++++.+.+.|+++.++. ..|++|+|+|++++.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~f~~~~l~~~ 349 (412)
T PTZ00433 270 GGDFLDGMKRLGMLVCGPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGECIGLSPTMPRGSMFLMSRLDLE 349 (412)
T ss_pred HHHHHHHHHHHhhccCCCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCeeEEEEEEechh
Confidence 467777776654 368899999999988875 57899999999999999999998864444 457789999999974
Q ss_pred ---C-CCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 373 ---G-MDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 373 ---~-~~~~~l~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
+ .+..++++.|+ ++||.++++..+..++++||+++..+ +.+.+++++|
T Consensus 350 ~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~~~~--e~l~~al~~l 402 (412)
T PTZ00433 350 KFRDIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTISRPV--EVLREAVERI 402 (412)
T ss_pred hcCCCCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEecCCH--HHHHHHHHHH
Confidence 1 25788999987 68999999887766899999999763 6788888876
No 54
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=4.6e-46 Score=364.02 Aligned_cols=325 Identities=21% Similarity=0.294 Sum_probs=265.7
Q ss_pred HHHHHHhCCC-CCCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCc-chHHHHHHHHHHh----C--CCCCcEEEeCC
Q 014492 84 EVLSIQLGRK-PEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDP-ESRRLRAALAKDS----G--LESDHILVGCG 154 (423)
Q Consensus 84 ~~~~~~~~~~-~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~-g~~~lr~~ia~~~----g--~~~~~i~~t~G 154 (423)
..+..++..+ +.++++|+.|++++++++.+.+++.+. .....|+++ |..+||+++++++ | +++++|++|+|
T Consensus 12 ~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G 91 (374)
T PRK05839 12 RELLKEITPNKEYKGLDLTIGEPQFETPKFIQDALKNNAHLLNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFG 91 (374)
T ss_pred HHHHHHhhhcCCCCeEEcCCCCCCCCCCHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecC
Confidence 3444445555 568999999999999999998888763 334678765 7889999998875 5 68899999999
Q ss_pred HHHHHHHHHHHhc--CCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCC
Q 014492 155 ADELIDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNP 230 (423)
Q Consensus 155 ~~~al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NP 230 (423)
+++++..++..++ .+||.|+++.|+|..|...++..|++++.++.+ +++.+|+++.+ + .++|+|++||||||
T Consensus 92 ~~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~--~--~~~k~v~i~nP~NP 167 (374)
T PRK05839 92 TREVLFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKE--L--QEVDLVILNSPNNP 167 (374)
T ss_pred cHHHHHHHHHHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhh--h--ccccEEEEeCCCCC
Confidence 9999999988764 478999999999999999999999999999975 34666655432 3 36999999999999
Q ss_pred cCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCch---hhh-----hccCCcEEEEccChhhhcccCccccccccC
Q 014492 231 DGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESR---MEW-----VKKHDNLIVLRTFSKRAGLAGLRVGYGAFP 298 (423)
Q Consensus 231 tG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~---~~~-----~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~ 298 (423)
||.+++.+++++|++. |++||+||+|.++.++... ... ....+++++++||||.|+++|+|+||++++
T Consensus 168 TG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~ 247 (374)
T PRK05839 168 TGRTLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGD 247 (374)
T ss_pred cCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEecC
Confidence 9999999999999864 9999999999998643322 111 123479999999999999999999999999
Q ss_pred HHHHHHHHHhcC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCH
Q 014492 299 LSIIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDA 376 (423)
Q Consensus 299 ~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~ 376 (423)
+++++++.+... .++.+.+.|.++..++.+.+++++.+++++++++.+.+.|. .. .|++|+|+|++++ +.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~----~~-~p~gg~fi~~~~~---~~ 319 (374)
T PRK05839 248 ASILKKYKAYRTYLGCASPLPLQKAAAVAWLDDEHAEFFRNIYAKNLKLAREILG----IT-IPPATFYVWLPVD---ND 319 (374)
T ss_pred HHHHHHHHHHHhhcCCCCChHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhcC----CC-CCCeeEEEEEeCC---Ch
Confidence 999999887754 35778889999988888888999999999999999888763 12 6889999999996 45
Q ss_pred HHHHHHHH-hCCcEEEeCCCCC----CCCeEEEEecChhhHHHHHHHHhhh
Q 014492 377 KKLKDDLA-KMGVMIRHYNNKE----LKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 377 ~~l~~~L~-~~gI~v~~~~~~~----~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.++.++|. ++||.|+++..++ .++|+||+++.. .+++.+++++|
T Consensus 320 ~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~~--~~~~~~~l~~l 368 (374)
T PRK05839 320 EEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVYD--TPKLEKALEII 368 (374)
T ss_pred HHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecCC--HHHHHHHHHHH
Confidence 78888887 5999999976532 358999999864 47888888876
No 55
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=1.3e-45 Score=364.48 Aligned_cols=327 Identities=19% Similarity=0.271 Sum_probs=272.6
Q ss_pred CCCCeeEcCCCCCC----CCCCHHHHHHHhcC-CC--CCCC-CCcchHHHHHHHHHHhC-----CCCCcEEEeCCHHHHH
Q 014492 93 KPEDIVKIDANENP----YGPPPEVREALGQL-KF--PYIY-PDPESRRLRAALAKDSG-----LESDHILVGCGADELI 159 (423)
Q Consensus 93 ~~~~~i~l~~~~~~----~~~~~~v~~al~~~-~~--~~~Y-~~~g~~~lr~~ia~~~g-----~~~~~i~~t~G~~~al 159 (423)
++.++++|+.|+++ +++++.+.+++.+. .. ...| |..|..+||++++++++ +++++|++|+|+++++
T Consensus 29 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~~~~~~~~i~~t~G~~~al 108 (401)
T TIGR01264 29 PEKPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNPDGPIEADDVVLCSGCSHAI 108 (401)
T ss_pred cCCCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCHHHEEECcChHHHH
Confidence 34678999999874 78889998888763 22 2458 66789999999999986 6889999999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCH
Q 014492 160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND 237 (423)
Q Consensus 160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~ 237 (423)
.+++.+++++||+|+++.|+|..|...++..|++++.++.+ +++++|++.+++.+. .++++++++|||||||.+++.
T Consensus 109 ~~~~~~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~~~~p~NPtG~~~~~ 187 (401)
T TIGR01264 109 EMCIAALANAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLID-EKTAALIVNNPSNPCGSVFSR 187 (401)
T ss_pred HHHHHHhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhc-cCceEEEEcCCCCCCCCCCCH
Confidence 99999999999999999999999999999999999999864 357899999999886 578999999999999999999
Q ss_pred HHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhccCCcEEEEccChhhhcccCccccccccCH------HHHHH
Q 014492 238 EDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL------SIIEY 304 (423)
Q Consensus 238 ~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~------~~~~~ 304 (423)
+++++|++. +++||+||+|.+|.+.+. .........++|+++||||.|+++|+|+||+++++ ++++.
T Consensus 188 ~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~~~~~~~ 267 (401)
T TIGR01264 188 QHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILRDIRDG 267 (401)
T ss_pred HHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccceEEEEEecCcchhHHHHHHH
Confidence 998888764 999999999999876432 12222223458999999999999999999999874 45566
Q ss_pred HHHhcC-CCCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCe-ecCCCceEEEEEeCC-----CCC
Q 014492 305 LWRAKQ-PYNVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTS-----GMD 375 (423)
Q Consensus 305 l~~~~~-~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~~~~~~~~~-----~~~ 375 (423)
+.+... .++++.+.|.++..+|.+ .+++++.++.++++++.+.+.|++++++. ..|++|+|+|++++. ..+
T Consensus 268 ~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~ 347 (401)
T TIGR01264 268 LVKLSQRILGPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLRPVMPSGAMYMMVGIEMEHFPEFKN 347 (401)
T ss_pred HHHHhhccCCCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeeEEEEEecccccCCCCC
Confidence 655544 467889999999999976 57899999999999999999999885454 468899999999753 236
Q ss_pred HHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 376 AKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 376 ~~~l~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
..++++.|. ++||.+++++.+..++++||+++..+ +.+.+++++|
T Consensus 348 ~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~~~~~--~~l~~~l~rl 393 (401)
T TIGR01264 348 DVEFTERLVAEQSVFCLPGSCFEYPGFFRVVLTVPV--VMMEEACSRI 393 (401)
T ss_pred HHHHHHHHHHhCCEEEeCchhcCCCCeEEEEEcCCH--HHHHHHHHHH
Confidence 788888886 89999999877666899999999753 6788888876
No 56
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=1.1e-45 Score=362.71 Aligned_cols=326 Identities=21% Similarity=0.335 Sum_probs=270.0
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhcC-C-CCCCC-CCcchHHHHHHHHHHh----CCC--C-CcEEEeCCHHHHHHHHHH
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQL-K-FPYIY-PDPESRRLRAALAKDS----GLE--S-DHILVGCGADELIDLIMR 164 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Y-~~~g~~~lr~~ia~~~----g~~--~-~~i~~t~G~~~al~~~~~ 164 (423)
.++|+|+.|++++++++.+.+++.+. . ....| |..|..+||+++++++ |++ + ++|++|+|+++++..+++
T Consensus 29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~~~ 108 (384)
T PRK12414 29 HDALNLSQGAPNFAPDPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLYAAIS 108 (384)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHHhCCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHHHH
Confidence 46899999999999999988888762 2 22568 4568899999999874 663 3 689999999999999999
Q ss_pred HhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHH
Q 014492 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243 (423)
Q Consensus 165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i 243 (423)
+++++||+|+++.|+|..+...++..|++++.+|.+ +++.+|++.+++.+. .++++|+++|||||||.+++.+++++|
T Consensus 109 ~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~-~~~~~v~i~~p~NPTG~~~s~~~~~~i 187 (384)
T PRK12414 109 ALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSPEDFRVNWDEVAAAIT-PRTRMIIVNTPHNPSATVFSAADLARL 187 (384)
T ss_pred HhcCCCCEEEEeCCCccchHHHHHHcCCEEEEEecCccccccCHHHHHhhcC-cccEEEEEcCCCCCCCcCCCHHHHHHH
Confidence 999999999999999999999999999999999975 467899999999996 689999999999999999999999888
Q ss_pred HcC----CCEEEEccCCccccCCCch---hhhhc-cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC--CCC
Q 014492 244 LEM----PILVVLDEAYTEFSGLESR---MEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYN 313 (423)
Q Consensus 244 ~~~----~~~li~Deay~~~~~~~~~---~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~--~~~ 313 (423)
++. ++++|+||+|.++.+++.. ..... ..+++++++||||.||++|+|+||+++++++++.+.+... .++
T Consensus 188 ~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~~~l~~~l~~~~~~~~~~ 267 (384)
T PRK12414 188 AQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPAELMDEIRKVHQFMVFS 267 (384)
T ss_pred HHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecCHHHHHHHHHHHhheecC
Confidence 763 9999999999998764422 11112 2468999999999999999999999999999999888763 478
Q ss_pred CcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCC--CCCHHHHHH-HHHhCCcEE
Q 014492 314 VSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS--GMDAKKLKD-DLAKMGVMI 390 (423)
Q Consensus 314 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~--~~~~~~l~~-~L~~~gI~v 390 (423)
.+.+.|.++..+|+++.+..+.++.++++++.+.+.|++.++....+.+++|+|+++++ ..+..+++. .|.++||.+
T Consensus 268 ~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gV~v 347 (384)
T PRK12414 268 ADTPMQHAFAEALAEPASYLGLGAFYQRKRDLLARELAGSRFELLPSEGSFFMLARFRHFSDESDSDFVLRLIRDARVAT 347 (384)
T ss_pred CCcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhCCCeecCCCcceEEEEcccccCCCCHHHHHHHHHHhCCEEE
Confidence 89999999999998866666788889999999999999886322345677889988864 234566664 455899999
Q ss_pred EeCCCCC----CCCeEEEEecChhhHHHHHHHHhhhC
Q 014492 391 RHYNNKE----LKGYVRVSVGKPEHTDALMECLMHLY 423 (423)
Q Consensus 391 ~~~~~~~----~~~~iRis~~~~~~~~~l~~al~~l~ 423 (423)
.+++.+. ..+++||+++.. .+++.+++++|.
T Consensus 348 ~pg~~f~~~~~~~~~iRis~~~~--~~~~~~~~~rl~ 382 (384)
T PRK12414 348 IPLSAFYTDGTDTGLIRLSFSKD--DATLVEGARRLC 382 (384)
T ss_pred ecchhhcCCCCCCCEEEEEecCC--HHHHHHHHHHHh
Confidence 9987532 257999999974 488999999873
No 57
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=2.6e-46 Score=374.18 Aligned_cols=327 Identities=19% Similarity=0.270 Sum_probs=264.0
Q ss_pred CCCeeEcCCCCCCCCCCHHHHHHHhcCC--------------CCCCCCCc-chHHHHHHHHHHhC--------CCCCcEE
Q 014492 94 PEDIVKIDANENPYGPPPEVREALGQLK--------------FPYIYPDP-ESRRLRAALAKDSG--------LESDHIL 150 (423)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~~~--------------~~~~Y~~~-g~~~lr~~ia~~~g--------~~~~~i~ 150 (423)
+..+|+|+.+||++.. +.+.+.+.... ...+|+++ |.++||+++|++++ +++++|+
T Consensus 37 p~g~i~L~~~En~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~~Ii 115 (468)
T PLN02450 37 PSGIIQMGLAENQLSF-DLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDPNKLV 115 (468)
T ss_pred CCeeEEeehhHhHhhH-HHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcChHHeE
Confidence 4568999999999876 66666665421 11348765 78899999999973 5889999
Q ss_pred EeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHH-HCCCeEEEecC--CCCCCCCHHHHHHHhhc-----CCceEE
Q 014492 151 VGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA-VNGAAVVKVPR--KSDFSLNVELIADAVER-----EKPKCI 222 (423)
Q Consensus 151 ~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~v~~--~~~~~~d~~~l~~~i~~-----~~~~~i 222 (423)
+|+|+++++..++.++++|||.|+++.|+|+.|...+. ..|++++.||. ++++.+|++++++.+.+ .++|+|
T Consensus 116 it~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v 195 (468)
T PLN02450 116 LTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGV 195 (468)
T ss_pred EccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEE
Confidence 99999999999999999999999999999999988777 58999999996 36778899999988753 378999
Q ss_pred EEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCC-ch---hhhhc--------cCCcEEEEccChhhhc
Q 014492 223 FLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE-SR---MEWVK--------KHDNLIVLRTFSKRAG 286 (423)
Q Consensus 223 ~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~-~~---~~~~~--------~~~~~i~i~S~SK~~g 286 (423)
++||||||||.+++.+++++|++. +++||+||+|.++.+.+ .. ..... ..+++++++||||.||
T Consensus 196 ~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~ 275 (468)
T PLN02450 196 LITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLG 275 (468)
T ss_pred EEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCC
Confidence 999999999999999999998874 99999999999876543 11 22211 3578999999999999
Q ss_pred ccCccccccccCHH-HHHHHHHhcCCCCCcHHHHHHHHHHhCChH----HHHHHHHHHHHHHHHHHHHHccCCCCeecCC
Q 014492 287 LAGLRVGYGAFPLS-IIEYLWRAKQPYNVSVAAEVAACAALQNPI----YLEKVKEALIKERERLFKLLKDVPFLNPYPS 361 (423)
Q Consensus 287 ~~G~R~G~i~~~~~-~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~----~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~ 361 (423)
++|+|+||++++++ +++.+.+....+.++.++|.++..+|++.+ ++++.+++++++++.+.+.|++++.....|.
T Consensus 276 l~GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~gi~~~~~~ 355 (468)
T PLN02450 276 LPGFRVGAIYSNDEMVVSAATKMSSFGLVSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAAGIKCLKSN 355 (468)
T ss_pred CCCccEEEEEECCHHHHHHHHHHhhcCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCC
Confidence 99999999999754 566666654445679999999999999863 6778899999999999999998864334566
Q ss_pred CceEEEEEeCCCCC------HHHHHHHHH-hCCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 362 YSNFILCEVTSGMD------AKKLKDDLA-KMGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 362 ~~~~~~~~~~~~~~------~~~l~~~L~-~~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
+|+|+|+++++..+ ..++.+.|. ++||.+.||..+ ..++|+||+++..++ +++.+++++|
T Consensus 356 ~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~~~~-~~l~~~l~ri 424 (468)
T PLN02450 356 AGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFANMSE-ETLDLAMKRL 424 (468)
T ss_pred ceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecCCCH-HHHHHHHHHH
Confidence 78899999974322 245677776 689999998764 346899999996332 6788888776
No 58
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=3.1e-46 Score=372.18 Aligned_cols=321 Identities=18% Similarity=0.231 Sum_probs=265.9
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhcCC-CCCCCCCc-chHHHHHHHHHHhC--CC-CCcEEEeCCHHHHHHHHHHHhcCC
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQLK-FPYIYPDP-ESRRLRAALAKDSG--LE-SDHILVGCGADELIDLIMRCVLDP 169 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~~-~~~~Y~~~-g~~~lr~~ia~~~g--~~-~~~i~~t~G~~~al~~~~~~l~~~ 169 (423)
..+++|+.+.++.+++|.+.+++.+.. ....|+++ |..+||++++++++ +. +++|++|+|+++++.++++++++|
T Consensus 85 ~~~i~L~~g~p~~~~~p~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~Iiit~G~~~al~~~~~~l~~p 164 (431)
T PRK15481 85 TPLHDLAGGNPDPQRLPDLSRYFARLSRTPRLYGDAPVSPELHAWAARWLRDDCPVAFEIDLTSGAIDAIERLLCAHLLP 164 (431)
T ss_pred chhhhhhcCCCChhHhHHHHHHHHHhhhhhhhcCCcCCCHHHHHHHHHHHhhccCCcCeEEEecCcHHHHHHHHHHhCCC
Confidence 356899998877777677778877632 23568765 67899999999986 33 469999999999999999999999
Q ss_pred CCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEc-CCCCCcCcCCCHHHHHHHHc---
Q 014492 170 GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNNPDGSIINDEDLLKILE--- 245 (423)
Q Consensus 170 gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~-~p~NPtG~~~~~~~l~~i~~--- 245 (423)
||.|++++|+|..|...++..|++++.+|.+++ ++|+++++++++ .++|+++++ |||||||.+++.+++++|++
T Consensus 165 gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~-g~~~~~l~~~~~-~~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~ 242 (431)
T PRK15481 165 GDSVAVEDPCFLSSINMLRYAGFSASPVSVDAE-GMQPEKLERALA-QGARAVILTPRAHNPTGCSLSARRAAALRNLLA 242 (431)
T ss_pred CCEEEEeCCCcHHHHHHHHHcCCeEEeeccCCC-CCCHHHHHHHHh-cCCCEEEECCCCCCCCCccCCHHHHHHHHHHHH
Confidence 999999999999999999999999999998644 699999999986 589999998 99999999999996666654
Q ss_pred -C-CCEEEEccCCccccCCCchhhhh-ccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC--CCCcHHHHH
Q 014492 246 -M-PILVVLDEAYTEFSGLESRMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEV 320 (423)
Q Consensus 246 -~-~~~li~Deay~~~~~~~~~~~~~-~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~--~~~~~~~~~ 320 (423)
. +++||+||+|.+|.+.+.. ..+ ...+++++++||||.|| +|+|+||+++++++++.+.+.... +++|.++|.
T Consensus 243 ~~~~~~ii~De~Y~~~~~~~~~-~~~~~~~~~vi~~~SfSK~~~-~GlRiG~~i~~~~~~~~~~~~~~~~~~~~s~~~q~ 320 (431)
T PRK15481 243 RYPQVLVIIDDHFALLSSSPYH-SVIPQTTQRWALIRSVSKALG-PDLRLAFVASDSATSARLRLRLNSGTQWVSHLLQD 320 (431)
T ss_pred hcCCceEEecCchhhhccCCCC-CCCcCCCCCEEEEeeeccccC-CCceeEEEeCCHHHHHHHHHHHhccccCCCHHHHH
Confidence 3 8899999999998754321 111 13578999999999999 999999999999999988765544 568999999
Q ss_pred HHHHHhCChH---HHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCC
Q 014492 321 AACAALQNPI---YLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKE 397 (423)
Q Consensus 321 a~~~~l~~~~---~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~ 397 (423)
++..+|++++ |+++.++.++++++.+.+.|++.+.....|++|+|+|+++++ +..++++.|.++||.+.++..+.
T Consensus 321 a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~~~~~~~p~gg~f~~~~l~~--~~~~~~~~l~~~gV~v~pg~~f~ 398 (431)
T PRK15481 321 LVYACLTDPEYQARLAQARLFYAQRRQKLARALQQYGIAIPSPGDGLNLWLPLDT--DSQATALTLAKSGWLVREGEAFG 398 (431)
T ss_pred HHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCeEEEEEECCC--CHHHHHHHHHHCCcEEecCCccc
Confidence 9999998854 578899999999999999999875433478999999999974 57889999999999999987642
Q ss_pred C---CCeEEEEecChhhHHHHHHHHhhh
Q 014492 398 L---KGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 398 ~---~~~iRis~~~~~~~~~l~~al~~l 422 (423)
. .+++||+++..++ +++.+++++|
T Consensus 399 ~~~~~~~iRis~~~~~~-~~i~~~~~~l 425 (431)
T PRK15481 399 VSAPSHGLRITLSTLND-AEINRLAADL 425 (431)
T ss_pred cCCCCCeEEEEcCCCCh-HHHHHHHHHH
Confidence 2 4689999997543 6677777665
No 59
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.3e-45 Score=362.79 Aligned_cols=335 Identities=20% Similarity=0.298 Sum_probs=271.5
Q ss_pred HHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhc-CC--CCCCCCC-cchHHHHHHHHHHh----C--CCCC-cEEEeCC
Q 014492 86 LSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPD-PESRRLRAALAKDS----G--LESD-HILVGCG 154 (423)
Q Consensus 86 ~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~Y~~-~g~~~lr~~ia~~~----g--~~~~-~i~~t~G 154 (423)
...+....+.++++|+.+.++...++.+.+++.+ .. ...+|++ .|..+||+++++++ | ++++ +|++|+|
T Consensus 24 ~~~~~~~~~~~~~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G 103 (403)
T PRK08636 24 LKMAARRAGEDIIDFSMGNPDGPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMG 103 (403)
T ss_pred HHHHHHhcCCCEEEcCCcCCCCCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCC
Confidence 3444444556789999998887767766666554 32 2367866 48899999999986 5 4666 7999999
Q ss_pred HHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC--CCCCCCCHHHH----HHHhhc--CCceEEEEcC
Q 014492 155 ADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELI----ADAVER--EKPKCIFLTS 226 (423)
Q Consensus 155 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l----~~~i~~--~~~~~i~l~~ 226 (423)
+++++.+++++++++||.|++++|+|+.+...++..|++++.+|. ++++++|++.+ ++.+++ .+++++++|+
T Consensus 104 ~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~ 183 (403)
T PRK08636 104 SKEGYVHLVQAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNF 183 (403)
T ss_pred hHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeC
Confidence 999999999999999999999999999999999999999999986 35678998754 555542 4789999999
Q ss_pred CCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhcc-CCcEEEEccChhhhcccCccccccccC
Q 014492 227 PNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFP 298 (423)
Q Consensus 227 p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~-~~~~i~i~S~SK~~g~~G~R~G~i~~~ 298 (423)
||||||.+++.+++++|++. +++||+||+|.++.+++. ....++. .+++++++||||.||++|+|+||++++
T Consensus 184 P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~~ 263 (403)
T PRK08636 184 PHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVGN 263 (403)
T ss_pred CCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEecccccCCccceeeeeeCC
Confidence 99999999999999998875 999999999999876532 1222322 356788999999999999999999999
Q ss_pred HHHHHHHHHhcC--CCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCC--
Q 014492 299 LSIIEYLWRAKQ--PYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSG-- 373 (423)
Q Consensus 299 ~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~-- 373 (423)
+++++.+.+... .++.+.+.|.++..+++. .+|++++++.++++++.+.+.|++.++....|.+|+|+|+++|+.
T Consensus 264 ~~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~g~~~~~~l~~~~~ 343 (403)
T PRK08636 264 KKLVGALKKIKSWLDYGMFTPIQVAATIALDGDQSCVEEIRETYRKRRDVLIESFANAGWELQKPRASMFVWAKIPEPAR 343 (403)
T ss_pred HHHHHHHHHHHHHhcccCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCcceEEEEECCCccC
Confidence 999998887765 356778888888888763 578899999999999999999998764334678999999999853
Q ss_pred -CCHHHHHHHHH-hCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014492 374 -MDAKKLKDDLA-KMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 374 -~~~~~l~~~L~-~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.++.++.+.++ ++||.+.++..++ .++++||+++. +.++|.+++++|
T Consensus 344 ~~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~~--~~~~l~~~~~rl 394 (403)
T PRK08636 344 HLGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALIE--NENRIRQAARNI 394 (403)
T ss_pred CCCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEecC--CHHHHHHHHHHH
Confidence 35688887765 7899999987643 35899999984 348899999887
No 60
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=1.4e-45 Score=361.65 Aligned_cols=325 Identities=24% Similarity=0.393 Sum_probs=272.4
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhcC-C-CCCCCC-CcchHHHHHHHHHHh----C--CCCC-cEEEeCCHHHHHHHHHH
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQL-K-FPYIYP-DPESRRLRAALAKDS----G--LESD-HILVGCGADELIDLIMR 164 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Y~-~~g~~~lr~~ia~~~----g--~~~~-~i~~t~G~~~al~~~~~ 164 (423)
.++|+|+.|++++++++.+.+++.+. . ....|+ ..|..++|+++++++ | ++++ +|++|+|+++++.++++
T Consensus 20 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~ 99 (378)
T PRK07682 20 EGVISLGVGEPDFVTPWNVREASIRSLEQGYTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVAMR 99 (378)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHH
Confidence 45799999999998888887777652 2 225685 568999999999997 3 4565 89999999999999999
Q ss_pred HhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHH
Q 014492 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK 242 (423)
Q Consensus 165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~ 242 (423)
+++++||.|++++|+|+.|...++..|++++.++.+ +++++|++++++.+. .+++++++++||||||.+++.+++++
T Consensus 100 ~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~~~~p~NPtG~~~s~~~~~~ 178 (378)
T PRK07682 100 AIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAIT-AKTKAILLCSPNNPTGAVLNKSELEE 178 (378)
T ss_pred HhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcC-cccEEEEEECCCCCcCcCcCHHHHHH
Confidence 999999999999999999999999999999999864 467899999999986 58999999999999999999988888
Q ss_pred HHcC----CCEEEEccCCccccCCCch--hhhh-ccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC--CCC
Q 014492 243 ILEM----PILVVLDEAYTEFSGLESR--MEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYN 313 (423)
Q Consensus 243 i~~~----~~~li~Deay~~~~~~~~~--~~~~-~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~--~~~ 313 (423)
|++. ++++|+||+|.++.+++.. ...+ +..+++++++||||.||++|+|+||+++++++++.+.+... .++
T Consensus 179 l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~i~~l~~~~~~~~~~ 258 (378)
T PRK07682 179 IAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPVYFSEAMLKIHQYSMMC 258 (378)
T ss_pred HHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhhhhcCHHHHHHHHHHHHhhccC
Confidence 8764 9999999999999875432 1222 22478999999999999999999999999999999876654 356
Q ss_pred CcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCC-CCCHHHHHHHHH-hCCcEE
Q 014492 314 VSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS-GMDAKKLKDDLA-KMGVMI 390 (423)
Q Consensus 314 ~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~-~~~~~~l~~~L~-~~gI~v 390 (423)
.+.++|.++..+|++ ..++++.++.++++++.+.+.|++++.....|.+++|+|++++. +.++.++.+.|+ ++||.+
T Consensus 259 ~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~p~g~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v 338 (378)
T PRK07682 259 APTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNEIGLTCHVPGGAFYAFPSISSTGLSSEEFAEQLLLEEKVAV 338 (378)
T ss_pred CCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHCCCccCCCCeeEEEEEeccCCCCCHHHHHHHHHHhCCEEE
Confidence 889999999999987 46788899999999999999999886433457788899998853 568899998886 789999
Q ss_pred EeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014492 391 RHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 391 ~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
+++..+. .++++||+++.. .+++.+++++|
T Consensus 339 ~pg~~f~~~~~~~iRis~~~~--~~~l~~~l~~l 370 (378)
T PRK07682 339 VPGSVFGESGEGFIRCSYATS--LEQLQEAMKRM 370 (378)
T ss_pred cCchhhCcCCCCeEEEEeCCC--HHHHHHHHHHH
Confidence 9987532 368999999974 37788888876
No 61
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=8.3e-46 Score=371.78 Aligned_cols=328 Identities=21% Similarity=0.293 Sum_probs=258.3
Q ss_pred CCCeeEcCCCCCCC--CC-CHHHHHHHhc----------CCCCCCCCC-cchHHHHHHHHHHhC--------CCCCcEEE
Q 014492 94 PEDIVKIDANENPY--GP-PPEVREALGQ----------LKFPYIYPD-PESRRLRAALAKDSG--------LESDHILV 151 (423)
Q Consensus 94 ~~~~i~l~~~~~~~--~~-~~~v~~al~~----------~~~~~~Y~~-~g~~~lr~~ia~~~g--------~~~~~i~~ 151 (423)
+..+|+|+.+||++ .. .+.+.+.... ......|++ .|.++||+++|++++ +++++|++
T Consensus 45 p~g~i~l~~aEN~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivi 124 (496)
T PLN02376 45 PHGIIQMGLAENQLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPERVVM 124 (496)
T ss_pred CCceEEeecchhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHHHHHHHHHHHHHHhCCCCcCChhhEEE
Confidence 45689999999988 33 3334333221 111134544 378999999999974 68999999
Q ss_pred eCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHH-HCCCeEEEecCC--CCCCCCHHHHHHHhh-----cCCceEEE
Q 014492 152 GCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA-VNGAAVVKVPRK--SDFSLNVELIADAVE-----REKPKCIF 223 (423)
Q Consensus 152 t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~v~~~--~~~~~d~~~l~~~i~-----~~~~~~i~ 223 (423)
|+|+++++..++.++++|||.|+++.|+|+.|...++ ..|++++.+|.+ +++++|+++++.++. ..++|+|+
T Consensus 125 t~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~ 204 (496)
T PLN02376 125 SGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLI 204 (496)
T ss_pred ccchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEE
Confidence 9999999999999999999999999999999998777 589999999974 568999999987642 14789999
Q ss_pred EcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc-hh--hhh-cc-------CCcEEEEccChhhhccc
Q 014492 224 LTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES-RM--EWV-KK-------HDNLIVLRTFSKRAGLA 288 (423)
Q Consensus 224 l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~-~~--~~~-~~-------~~~~i~i~S~SK~~g~~ 288 (423)
+||||||||.+++.+++++|++. +++||+||+|.++.+.+. .. ..+ .. .+++++++||||.||+|
T Consensus 205 l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glp 284 (496)
T PLN02376 205 LTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLP 284 (496)
T ss_pred EcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCC
Confidence 99999999999999999998875 999999999999875432 11 111 11 13577899999999999
Q ss_pred CccccccccC-HHHHHHHHHhcCCCCCcHHHHHHHHHHhCChHH----HHHHHHHHHHHHHHHHHHHccCCCCeecCCCc
Q 014492 289 GLRVGYGAFP-LSIIEYLWRAKQPYNVSVAAEVAACAALQNPIY----LEKVKEALIKERERLFKLLKDVPFLNPYPSYS 363 (423)
Q Consensus 289 G~R~G~i~~~-~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~ 363 (423)
|+|+||++++ +.+.+.+......+.++.+.|.++..+|++++| +++.+++++++++.+.+.|++.+.....+.+|
T Consensus 285 GlRvG~li~~~~~l~~~~~~~~~~~~vs~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~gi~~~~~~aG 364 (496)
T PLN02376 285 GFRVGIVYSFNDSVVSCARKMSSFGLVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKADIACLTSNAG 364 (496)
T ss_pred cceEEEEEECCHHHHHHHHHHhhcCCCCHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCce
Confidence 9999999995 566666655555567899999999999998665 44568889999999999998875433457788
Q ss_pred eEEEEEeCCCC-------CHHHHHHHHH-hCCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 364 NFILCEVTSGM-------DAKKLKDDLA-KMGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 364 ~~~~~~~~~~~-------~~~~l~~~L~-~~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
+|+|+++++.. +..++++.|. +.||.+.||..+ ..++|+||+|+..++ +.|.+++++|
T Consensus 365 ~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~~~~-~~l~~al~rl 432 (496)
T PLN02376 365 LFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFANMDD-DTLHVALGRI 432 (496)
T ss_pred EEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeCCCH-HHHHHHHHHH
Confidence 99999997432 2367888887 569999998874 347899999996443 7899999887
No 62
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.3e-45 Score=358.39 Aligned_cols=325 Identities=23% Similarity=0.352 Sum_probs=274.9
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhcC-C-CCCCCCC-cchHHHHHHHHHHh----C--CCCCcEEEeCCHHHHHHHHHHH
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQL-K-FPYIYPD-PESRRLRAALAKDS----G--LESDHILVGCGADELIDLIMRC 165 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Y~~-~g~~~lr~~ia~~~----g--~~~~~i~~t~G~~~al~~~~~~ 165 (423)
.++++|+.|++++++++.+.+++.+. . ....|++ .|.+++|+++++++ | +++++|++|+|+++++..++..
T Consensus 24 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~ 103 (382)
T PRK06108 24 EGVLPLWFGESDLPTPDFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAAQA 103 (382)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHHHH
Confidence 45799999999999999999998773 2 2245865 58899999999986 6 7889999999999999999999
Q ss_pred hcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC---CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHH
Q 014492 166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK 242 (423)
Q Consensus 166 l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~---~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~ 242 (423)
++++||.|+++.|+|..+...++..|++++.+|.+ .+|.+|++++++.+. .+++++++++||||||.+++.+++++
T Consensus 104 l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~-~~~~~i~l~~p~NPtG~~~~~~~~~~ 182 (382)
T PRK06108 104 LVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAIT-PRTRALFINSPNNPTGWTASRDDLRA 182 (382)
T ss_pred hcCCCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcC-ccceEEEEECCCCCCCcccCHHHHHH
Confidence 99999999999999999999999999999999974 346799999999886 68999999999999999999998888
Q ss_pred HHcC----CCEEEEccCCccccCC-C-ch---hhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC--C
Q 014492 243 ILEM----PILVVLDEAYTEFSGL-E-SR---MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--P 311 (423)
Q Consensus 243 i~~~----~~~li~Deay~~~~~~-~-~~---~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~--~ 311 (423)
|++. |+++|+||+|.++.++ + .. .......+++++++||||.||++|+|+||+++++++++.+.+... .
T Consensus 183 l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~~~~~~~~~~~~~ 262 (382)
T PRK06108 183 ILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPPALGQVLEKLIEYNT 262 (382)
T ss_pred HHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCHHHHHHHHHHHHhcc
Confidence 8764 9999999999998764 2 11 222223578999999999999999999999999999998876653 3
Q ss_pred CCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCCCCCHHHHHHHHH-hCCc
Q 014492 312 YNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTSGMDAKKLKDDLA-KMGV 388 (423)
Q Consensus 312 ~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~~~~~~~l~~~L~-~~gI 388 (423)
++++.+.|.++..+|.+ .+++++.+++++++++.+.+.|++++++.+ .|.+++|+|+++++..+..++++.|. ++||
T Consensus 263 ~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~ll~~~gV 342 (382)
T PRK06108 263 SCVAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRALPGVEVAKPDGAMYAFFRIPGVTDSLALAKRLVDEAGL 342 (382)
T ss_pred cCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEEEeCCCCCCHHHHHHHHHHhCCE
Confidence 56788999999999987 468899999999999999999988755554 46778999999986667889999886 7899
Q ss_pred EEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 389 MIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 389 ~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.++++..+ ..++++||+++. +.+++.+++++|
T Consensus 343 ~v~pg~~f~~~~~~~~Ris~~~--~~~~l~~~l~~l 376 (382)
T PRK06108 343 GLAPGTAFGPGGEGFLRWCFAR--DPARLDEAVERL 376 (382)
T ss_pred EEeCchhhCCCCCCEEEEEecC--CHHHHHHHHHHH
Confidence 99988753 346899999998 358899998876
No 63
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=6.8e-45 Score=357.80 Aligned_cols=326 Identities=23% Similarity=0.321 Sum_probs=271.5
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCC-CcchHHHHHHHHHHh----CC--C-CCcEEEeCCHHHHHHHHH
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQL-K--FPYIYP-DPESRRLRAALAKDS----GL--E-SDHILVGCGADELIDLIM 163 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~Y~-~~g~~~lr~~ia~~~----g~--~-~~~i~~t~G~~~al~~~~ 163 (423)
.+.++|+.|++++++++.+.+++.+. . ....|+ ..|..++|+++++++ |+ + +++|++|+|+++++..++
T Consensus 27 ~~~~~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~ 106 (389)
T PRK05957 27 PGTISLGQGVVSYPPPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNAI 106 (389)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHHH
Confidence 35799999999999999999998763 2 224674 457788888887765 65 3 678999999999999999
Q ss_pred HHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHH
Q 014492 164 RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243 (423)
Q Consensus 164 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i 243 (423)
..++++||+|++++|+|..+...++..|++++.+|.++++++|++++++.++ +++|+|+++|||||||.+++.+++++|
T Consensus 107 ~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~klv~~~~p~NPtG~~~~~~~~~~i 185 (389)
T PRK05957 107 LAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPTDDNYQLQPEAIEQAIT-PKTRAIVTISPNNPTGVVYPEALLRAV 185 (389)
T ss_pred HHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEeecCCCCCcCHHHHHHhcC-cCceEEEEeCCCCCCCcCcCHHHHHHH
Confidence 9999999999999999999888888899999999987788999999999996 689999999999999999997777776
Q ss_pred HcC----CCEEEEccCCccccCCCc----hhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC--CC
Q 014492 244 LEM----PILVVLDEAYTEFSGLES----RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YN 313 (423)
Q Consensus 244 ~~~----~~~li~Deay~~~~~~~~----~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~--~~ 313 (423)
++. |++||+||+|.++.++.. .....+..+++|+++||||.||++|+|+||+++++++++++...... .+
T Consensus 186 ~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~~~~ 265 (389)
T PRK05957 186 NQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIPIHLLEAIKKIQDTILIC 265 (389)
T ss_pred HHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEEEecCHHHHHHHHHHHhhcccC
Confidence 653 999999999999886532 11222345689999999999999999999999999999999887754 45
Q ss_pred CcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCC-ee-cCCCceEEEEEeCCCCCHHHHHHHHH-hCCcE
Q 014492 314 VSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFL-NP-YPSYSNFILCEVTSGMDAKKLKDDLA-KMGVM 389 (423)
Q Consensus 314 ~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~-~~-~p~~~~~~~~~~~~~~~~~~l~~~L~-~~gI~ 389 (423)
.+.+.|.++..+|++ .+|+++.++.++++++.+.+.|++++++ .+ .|.+++|+|++++.+.++.++++.|. ++||.
T Consensus 266 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~l~~~~gv~ 345 (389)
T PRK05957 266 PPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHPANGAFYCFLKVNTDLNDFELVKQLIREYRVA 345 (389)
T ss_pred CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCeeEEEEEeCCCCCChHHHHHHHHHHCCEE
Confidence 678899999999987 5688889899999999999999987653 43 35668999999987788999999987 68999
Q ss_pred EEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014492 390 IRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 390 v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
+.++..++ .++++||+++..+ .+++.+++++|
T Consensus 346 v~pg~~f~~~~~~~iRis~~~~~-~~~l~~~~~~l 379 (389)
T PRK05957 346 VIPGTTFGMKNGCYLRIAYGALQ-KATAKEGIERL 379 (389)
T ss_pred EccchhhCCCCCCEEEEEEecCC-HHHHHHHHHHH
Confidence 99987642 2569999998644 36777777765
No 64
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=6.2e-45 Score=358.08 Aligned_cols=333 Identities=19% Similarity=0.278 Sum_probs=277.1
Q ss_pred HHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcC---CCCCCC-CCcchHHHHHHHHHHhC------CCCCcEEEeCCHHH
Q 014492 88 IQLGRKPEDIVKIDANENPYGPPPEVREALGQL---KFPYIY-PDPESRRLRAALAKDSG------LESDHILVGCGADE 157 (423)
Q Consensus 88 ~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~---~~~~~Y-~~~g~~~lr~~ia~~~g------~~~~~i~~t~G~~~ 157 (423)
.++..++.+.++|+.+++++.+++.+.+++.+. .....| +..|.++||++++++++ +++++|++|+|+++
T Consensus 22 ~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 101 (386)
T PRK07550 22 AGYDGADGPLIDLSQAVPGYPPPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQ 101 (386)
T ss_pred HHHhhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHH
Confidence 334345667899999999998888888888763 123568 45689999999999873 57899999999999
Q ss_pred HHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCC
Q 014492 158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII 235 (423)
Q Consensus 158 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~ 235 (423)
++..++.+++++||+|+++.|+|..+...++..|++++.++.+ +++.+|++++++.++ .+++++++++||||||.++
T Consensus 102 al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~-~~~~~v~~~~P~NPtG~~~ 180 (386)
T PRK07550 102 AFWAAMVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALIT-PRTRAIALVTPNNPTGVVY 180 (386)
T ss_pred HHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhc-ccCcEEEEeCCCCCCCccc
Confidence 9999999999999999999999999999999999999999975 356789999999997 5899999999999999999
Q ss_pred CHHHHHHHHcC----CCEEEEccCCccccCCCc-hhhhh---ccCCcEEEEccChhhhcccCccccccccCHHHHHHHHH
Q 014492 236 NDEDLLKILEM----PILVVLDEAYTEFSGLES-RMEWV---KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR 307 (423)
Q Consensus 236 ~~~~l~~i~~~----~~~li~Deay~~~~~~~~-~~~~~---~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~ 307 (423)
+.+++++|++. |++||+||+|.+|.+... ..... +..+++++++||||.||++|+|+||+++++++++.+.+
T Consensus 181 ~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~ 260 (386)
T PRK07550 181 PPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVASPARIAEIEK 260 (386)
T ss_pred CHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEeeecCHHHHHHHHH
Confidence 98877777664 999999999998865322 11111 22468999999999999999999999999999988887
Q ss_pred hcCC--CCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCC-CCCHHHHHHHH
Q 014492 308 AKQP--YNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS-GMDAKKLKDDL 383 (423)
Q Consensus 308 ~~~~--~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~-~~~~~~l~~~L 383 (423)
.... .+++.++|.++..++++ .+|.++.++.++++++.+.+.|++++.+.+.+.+++|+|++++. +.++.++++.|
T Consensus 261 ~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~l 340 (386)
T PRK07550 261 FMDTVAICAPRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFARLPGWELLASGAYFAYVRHPFPDRPSREVARRL 340 (386)
T ss_pred HHhhcccCCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhCCCceeCCCceEEEEecCCCCCCCHHHHHHHH
Confidence 7654 45688999999999987 67888899999999999999998874455567889999999986 67899999987
Q ss_pred H-hCCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 384 A-KMGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 384 ~-~~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
. ++||.+.++..+ ..++++||+++..+ .+++.+++++|
T Consensus 341 ~~~~gv~v~pg~~f~~~~~~~iRis~~~~~-~~~~~~~~~~l 381 (386)
T PRK07550 341 AKEAGILCLPGTMFGPGQEGYLRLAFANAD-VAGIGELVERL 381 (386)
T ss_pred HHhcCEEEeCchhhCCCCCCEEEEEeecCC-HHHHHHHHHHH
Confidence 6 789999998763 23679999998644 37788887776
No 65
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=100.00 E-value=5.4e-45 Score=350.55 Aligned_cols=312 Identities=22% Similarity=0.297 Sum_probs=258.2
Q ss_pred hHHHHHHhCCCCCCeeEcCCCCCCCCCCH-HHHHHHhcCCCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492 83 FEVLSIQLGRKPEDIVKIDANENPYGPPP-EVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (423)
Q Consensus 83 ~~~~~~~~~~~~~~~i~l~~~~~~~~~~~-~v~~al~~~~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~ 161 (423)
...++...|....++|+|+.|+|++++++ .+.+. . ...||++. .+||++++++++. ++|++|+|+++++.+
T Consensus 8 ~~~~~~~~~~~~~~~i~l~~ne~p~~~~~~~~~~~--~---~~~yp~~~-~~Lr~~ia~~~~~--~~I~it~Gs~~al~~ 79 (330)
T PRK05664 8 LRRAAQRYGIPLADWLDLSTGIAPWPWPVPAIPAD--A---WARLPETD-DGLEAAARAYYGA--PQLLPVAGSQAAIQA 79 (330)
T ss_pred HHHHHHHcCCCHHHheeecCCcCCCCCCCcccCHH--H---HHhCCCCh-HHHHHHHHHHhCC--CCEEECcCHHHHHHH
Confidence 44455556655567899999999997763 22111 1 13488754 8999999999995 699999999999998
Q ss_pred HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHH
Q 014492 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL 241 (423)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~ 241 (423)
++. +.+||+|++++|+|+.|...++..|++++.+|.+ ++++.+. +++++++||||||||.+++.++++
T Consensus 80 ~~~--~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~~--------~~~~~~~--~~~~v~l~nP~NPTG~~~s~~~l~ 147 (330)
T PRK05664 80 LPR--LRAPGRVGVLSPCYAEHAHAWRRAGHQVRELDEA--------EVEAALD--SLDVLVVVNPNNPTGRRFDPARLL 147 (330)
T ss_pred HHH--ccCCCEEEEcCCChHHHHHHHHHcCCeEEEechh--------hHhhhhc--CCCEEEEeCCcCCCCCccCHHHHH
Confidence 864 5799999999999999999999999999999853 3455553 678899999999999999999999
Q ss_pred HHHcC----CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCcHH
Q 014492 242 KILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVA 317 (423)
Q Consensus 242 ~i~~~----~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~~ 317 (423)
+|++. +++||+||+|.++...++. ..+...+++++++||||.||++|+|+||+++++++++.+.+...+++++.+
T Consensus 148 ~l~~~~~~~~~~iI~DE~y~~~~~~~s~-~~~~~~~~vi~~~SfSK~~gl~GlRiG~~v~~~~l~~~~~~~~~~~~~~~~ 226 (330)
T PRK05664 148 AWHARLAARGGWLVVDEAFMDNTPQHSL-AACAHRPGLIVLRSFGKFFGLAGARLGFVLAEPALLRALAELLGPWTVSGP 226 (330)
T ss_pred HHHHHHHhcCCEEEEECCcccCCCcccc-cccccCCCEEEEeeccccccCCCcceEEEEeCHHHHHHHHHhcCCCCCCHH
Confidence 98753 8999999999987643332 233346789999999999999999999999999999999988888899999
Q ss_pred HHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCC
Q 014492 318 AEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKE 397 (423)
Q Consensus 318 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~ 397 (423)
+|.++..+|.+.++.++.++.++++++++.+.|++++ +.+.++.++|+|++++ ++.++.+.|.++||.|+.+.
T Consensus 227 ~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~~~~~~f~~~~~~---~~~~~~~~l~~~gi~v~~f~--- 299 (330)
T PRK05664 227 TRWLAQAALADTPWQRRQRERLLAASQRLAALLRRHG-LTPAGGCALFQWVRTE---DAAALHEFLARRGILTRLFE--- 299 (330)
T ss_pred HHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHCC-CcccCCcceEEEEecC---CHHHHHHHHHHCCeEEEECC---
Confidence 9999999999888888899999999999999999885 3333444488998875 67899999999999998754
Q ss_pred CCCeEEEEec-ChhhHHHHHHHHhhh
Q 014492 398 LKGYVRVSVG-KPEHTDALMECLMHL 422 (423)
Q Consensus 398 ~~~~iRis~~-~~~~~~~l~~al~~l 422 (423)
..+++||+++ +.+++++|.++|+++
T Consensus 300 ~~~~iRis~~~~~~~~~~l~~al~~~ 325 (330)
T PRK05664 300 QPASLRFGLPADEADWARLDQALLAY 325 (330)
T ss_pred CCCeEEEECCCCHHHHHHHHHHHHHH
Confidence 3579999999 677789999999876
No 66
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=4.6e-45 Score=361.31 Aligned_cols=318 Identities=22% Similarity=0.338 Sum_probs=257.3
Q ss_pred CCCeeEcCCCCCCCCCCHHHHHHHhcC-C------CCCCC-CCcchHHHHHHHHHHh------CCCCCcEEEeCCHHHHH
Q 014492 94 PEDIVKIDANENPYGPPPEVREALGQL-K------FPYIY-PDPESRRLRAALAKDS------GLESDHILVGCGADELI 159 (423)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~------~~~~Y-~~~g~~~lr~~ia~~~------g~~~~~i~~t~G~~~al 159 (423)
+.++++|+.|++++++++.+.+++.+. . ...+| |..|.++||+++++++ ++++++|++|+|+++++
T Consensus 33 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al 112 (409)
T PRK07590 33 EAKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDGAKCDT 112 (409)
T ss_pred CCceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHHHHH
Confidence 456899999999999999888877652 1 22568 6678999999999986 67899999999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCe-----------EEEecCCC--CCCCCHHHHHHHhhcCCceEEEEcC
Q 014492 160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAA-----------VVKVPRKS--DFSLNVELIADAVEREKPKCIFLTS 226 (423)
Q Consensus 160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~-----------~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~ 226 (423)
.++.. ++.+||+|++++|+|+.|...++..|.+ ++.+|.+. ++.+|++ ++++|+|++||
T Consensus 113 ~~l~~-~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~-------~~~~k~i~l~n 184 (409)
T PRK07590 113 GNILD-IFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELP-------EEKVDIIYLCF 184 (409)
T ss_pred HHHHH-hcCCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCc-------ccCceEEEEeC
Confidence 98764 6789999999999999999999999987 88888753 3444422 25899999999
Q ss_pred CCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCch---hhhhcc-CCcEEEEccChhhhcccCccccccccC
Q 014492 227 PNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESR---MEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFP 298 (423)
Q Consensus 227 p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~---~~~~~~-~~~~i~i~S~SK~~g~~G~R~G~i~~~ 298 (423)
||||||.+++.+++++|++. +++||+||+|.+|.+++.. ...++. .+++|+++||||.||++|+|+||++++
T Consensus 185 P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~i~~ 264 (409)
T PRK07590 185 PNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFTGTRCAYTVVP 264 (409)
T ss_pred CCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCCcCceeEEEEcC
Confidence 99999999999999998764 9999999999998764421 222222 357899999999999999999999999
Q ss_pred HHHHHHH------------HH-hcCC-CCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCC
Q 014492 299 LSIIEYL------------WR-AKQP-YNVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNP-YPS 361 (423)
Q Consensus 299 ~~~~~~l------------~~-~~~~-~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~ 361 (423)
+++++.+ .. .... .+++.++|.++..++.+ .+|+++.++.++++++.+.+.|++.+ +.+ .|.
T Consensus 265 ~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~~~~ 343 (409)
T PRK07590 265 KELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLESAG-FEVYGGV 343 (409)
T ss_pred HHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcC-CceecCC
Confidence 9988721 11 1222 35788999999888875 46888999999999999999999885 444 456
Q ss_pred CceEEEEEeCCCCCHHHHHHHHH-hCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014492 362 YSNFILCEVTSGMDAKKLKDDLA-KMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 362 ~~~~~~~~~~~~~~~~~l~~~L~-~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
+++|+|++++++.++.++++.|. ++||.+.+++.++ ..+++||++... .+++.+++++|
T Consensus 344 g~~f~wi~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~--~~~l~~~l~rl 405 (409)
T PRK07590 344 NAPYIWVKTPDGMSSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAFGS--RENVLEAMERI 405 (409)
T ss_pred cceEEEEECCCCCCHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEccCC--HHHHHHHHHHH
Confidence 89999999987778888998887 6799999987632 357999997543 36788888876
No 67
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=100.00 E-value=1.6e-44 Score=347.38 Aligned_cols=322 Identities=32% Similarity=0.465 Sum_probs=275.3
Q ss_pred CCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHH
Q 014492 80 ILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELI 159 (423)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al 159 (423)
+++++..++++|.+.++.++|+.|+|+++++ ..+.. .....+||++..+++|+++++++|+++++|++|+|+++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~i 77 (330)
T TIGR01140 2 GGNLRRAAARYGIPPEDWLDFSTGINPLGPP--VPPIP--ASAWARYPDPEYDELRAAAAAYYGLPAASVLPVNGAQEAI 77 (330)
T ss_pred CccHHHHHHHcCCChhheeEccccCCCCCCC--hhhcc--hHHHhhCCCccHHHHHHHHHHHhCCChhhEEECCCHHHHH
Confidence 4678889999999989999999999999875 22211 1122668877679999999999999999999999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHH
Q 014492 160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239 (423)
Q Consensus 160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~ 239 (423)
..+.+. +.+| .|+++.|+|..|...++..|.+++.++ |++++++.+. +++++++++||||||.+++.++
T Consensus 78 ~~~~~~-l~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~-------d~~~l~~~~~--~~~~v~i~~p~NPtG~~~~~~~ 146 (330)
T TIGR01140 78 YLLPRL-LAPG-RVLVLAPTYSEYARAWRAAGHEVVELP-------DLDRLPAALE--ELDVLVLCNPNNPTGRLIPPET 146 (330)
T ss_pred HHHHHH-hCCC-eEEEeCCCcHHHHHHHHHcCCEEEEeC-------CHHHHHhhcc--cCCEEEEeCCCCCCCCCCCHHH
Confidence 998765 5777 699999999999999999999999987 7899999884 5789999999999999999999
Q ss_pred HHHHHcC----CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCc
Q 014492 240 LLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVS 315 (423)
Q Consensus 240 l~~i~~~----~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~ 315 (423)
+++|++. |++||+||+|.++....+.....+..+++++++||||.||++|+|+||+++++++++.+......++.+
T Consensus 147 ~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~s 226 (330)
T TIGR01140 147 LLALAARLRARGGWLVVDEAFIDFTPDASLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHPALLARLREALGPWTVN 226 (330)
T ss_pred HHHHHHHhHhcCCEEEEECcccccCCccchhhHhccCCCEEEEEecchhhcCchhhhhheeCCHHHHHHHHhcCCCCCch
Confidence 9888764 999999999998876533333233468899999999999999999999999999999999888788899
Q ss_pred HHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC
Q 014492 316 VAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN 395 (423)
Q Consensus 316 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~ 395 (423)
.++|.++..++++.+|.+..+++++++++.+.+.|++++.+.+.|+.++|+|++++ +..+++++|.++||.+.++..
T Consensus 227 ~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~f~~~~~~---~~~~l~~~l~~~gi~v~pg~~ 303 (330)
T TIGR01140 227 GPARAAGRAALADTAWQAATRARLAAERARLAALLARLGGLEVVGGTALFLLVRTP---DAAALHEALARRGILIRDFDN 303 (330)
T ss_pred HHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhCCCceECCCCCeEEEEEcC---CHHHHHHHHHHCCEEEEECCC
Confidence 99999999999988888889999999999999999999877777888999999986 467899999999999999887
Q ss_pred CC--CCCeEEEEecChhhHHHHHHHH
Q 014492 396 KE--LKGYVRVSVGKPEHTDALMECL 419 (423)
Q Consensus 396 ~~--~~~~iRis~~~~~~~~~l~~al 419 (423)
+. ..+++||++++..+.+.|..++
T Consensus 304 f~~~~~~~iRi~~~~~~~~~~~~~~l 329 (330)
T TIGR01140 304 FPGLDPRYLRFALPTDEENDRLEEAL 329 (330)
T ss_pred CCCCCCCEEEEEecCHHHHHHHHHhh
Confidence 43 3579999999876556666655
No 68
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.3e-44 Score=354.47 Aligned_cols=325 Identities=23% Similarity=0.419 Sum_probs=272.2
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhcC-C-CCCCC-CCcchHHHHHHHHHHh------CCCCCcEEEeCCHHHHHHHHHHH
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQL-K-FPYIY-PDPESRRLRAALAKDS------GLESDHILVGCGADELIDLIMRC 165 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Y-~~~g~~~lr~~ia~~~------g~~~~~i~~t~G~~~al~~~~~~ 165 (423)
.++++|+.|++++++++.+.+++.+. . ....| |..|.++||+++++++ ++++++|++|+|+++++.+++..
T Consensus 33 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~ 112 (391)
T PRK08361 33 ENVISLGIGEPDFDTPKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFES 112 (391)
T ss_pred cCeEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHHHHH
Confidence 46799999999998888888888763 2 22457 6678999999999987 36789999999999999999999
Q ss_pred hcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC--CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHH
Q 014492 166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243 (423)
Q Consensus 166 l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i 243 (423)
++++||.|++++|+|..+...++..|++++.+|.+. ++.+|++++++.+. .+++++++++||||||.+++.+++++|
T Consensus 113 l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~-~~~~~v~i~~p~NPtG~~~~~~~~~~l 191 (391)
T PRK08361 113 LLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELIT-KRTRMIVINYPNNPTGATLDKEVAKAI 191 (391)
T ss_pred hcCCCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcc-cccEEEEEeCCCCCCCcCcCHHHHHHH
Confidence 999999999999999999999999999999999653 56799999999997 679999999999999999997777776
Q ss_pred Hc---C-CCEEEEccCCccccCCCc-hhhhhc-cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC--CCCCc
Q 014492 244 LE---M-PILVVLDEAYTEFSGLES-RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVS 315 (423)
Q Consensus 244 ~~---~-~~~li~Deay~~~~~~~~-~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~--~~~~~ 315 (423)
++ . ++++|+||+|.+|.+.+. ...... ..+++++++||||.||++|+|+||+++++++++.+.+... .++++
T Consensus 192 ~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~ 271 (391)
T PRK08361 192 ADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVIAPEQVIKDMIKLHAYIIGNVA 271 (391)
T ss_pred HHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHhhhhhhccCHHHHHHHHHHHhhhccCCC
Confidence 55 3 999999999999875322 111111 2468999999999999999999999999999998876654 36788
Q ss_pred HHHHHHHHHHhCCh---HHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCC-CCCHHHHHHHHH-hCCcE
Q 014492 316 VAAEVAACAALQNP---IYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS-GMDAKKLKDDLA-KMGVM 389 (423)
Q Consensus 316 ~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~-~~~~~~l~~~L~-~~gI~ 389 (423)
.+.|.++..+|++. +++++.++.++++++.+.+.|++++++.+ .|.+++|+|+++++ +.++.++.+.|. ++||.
T Consensus 272 ~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~g~~~~~~~l~~~~~~~~~l~~~l~~~~gv~ 351 (391)
T PRK08361 272 SFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEPKGAFYVFANIDETGMSSEDFAEWLLEKARVV 351 (391)
T ss_pred hHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCEEEEEEEECCCCCCCHHHHHHHHHHhCCEE
Confidence 89999999999874 36888999999999999999998866654 45667889999984 568899999887 68999
Q ss_pred EEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 390 IRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 390 v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
+.++..+ ..++++||+++..+ +++.+++++|
T Consensus 352 v~pg~~f~~~~~~~iRi~~~~~~--~~l~~al~~l 384 (391)
T PRK08361 352 VIPGTAFGKAGEGYIRISYATSK--EKLIEAMERM 384 (391)
T ss_pred EcCchhhCCCCCCEEEEEecCCH--HHHHHHHHHH
Confidence 9998763 33589999999753 5899888876
No 69
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=1.5e-44 Score=355.55 Aligned_cols=325 Identities=21% Similarity=0.293 Sum_probs=269.8
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhcC--CCCCCCCCc-chHHHHHHHHHHh----C--CCCC-cEEEeCCHHHHHHHHHH
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQL--KFPYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCGADELIDLIMR 164 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~--~~~~~Y~~~-g~~~lr~~ia~~~----g--~~~~-~i~~t~G~~~al~~~~~ 164 (423)
.++++|+.|.++.+.++.+.+++.+. ....+|+++ |.++||+++++++ | ++++ +|++|+|+++++..++.
T Consensus 26 ~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~ 105 (387)
T PRK08912 26 HGAINLGQGFPDDPGPEDVRRAAADALLDGSNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAALL 105 (387)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHHHHH
Confidence 45799999999888788888776652 223668664 7899999999986 4 5677 99999999999999999
Q ss_pred HhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHH
Q 014492 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243 (423)
Q Consensus 165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i 243 (423)
.++++||+|+++.|+|..+...++..|++++.+|.+ +++.+|++++++.+. .+++++++++||||||.+++.+++++|
T Consensus 106 ~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~NPtG~~~s~~~~~~i 184 (387)
T PRK08912 106 ALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLEPPHWRLPRAALAAAFS-PRTKAVLLNNPLNPAGKVFPREELALL 184 (387)
T ss_pred HhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccCcCCHHHHHHHhC-ccceEEEEeCCCCCcCcccCHHHHHHH
Confidence 999999999999999999999999999999999975 468899999999886 689999999999999999999998887
Q ss_pred HcC----CCEEEEccCCccccCCCc---hhhhhc-cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC--CC
Q 014492 244 LEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YN 313 (423)
Q Consensus 244 ~~~----~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~--~~ 313 (423)
++. ++++|+||+|.++.+++. ...... ..+++++++||||.||++|+|+||+++++++++.+...... ++
T Consensus 185 ~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~~~~l~~~~~~~~~~ 264 (387)
T PRK08912 185 AEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAAPPLLRVLAKAHQFLTFT 264 (387)
T ss_pred HHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEEecCHHHHHHHHHHHhhcccc
Confidence 764 999999999998876432 111222 24789999999999999999999999999999998876654 66
Q ss_pred CcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCC---CCCHHHHHHHHH-hCCc
Q 014492 314 VSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS---GMDAKKLKDDLA-KMGV 388 (423)
Q Consensus 314 ~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~---~~~~~~l~~~L~-~~gI 388 (423)
.++..|.++..++.. .+|+++.+++++++++.+.+.|++.+.....+.+++|+|+++++ ..+..++++.|+ ++||
T Consensus 265 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~g~~~l~~~l~~~~~~~~~~~~~~~l~~~~gV 344 (387)
T PRK08912 265 TPPNLQAAVAYGLGKPDDYFEGMRADLARSRDRLAAGLRRIGFPVLPSQGTYFLTVDLAPLGLAEDDVAFCRRLVEEAGV 344 (387)
T ss_pred CChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEecccccCCCCCHHHHHHHHHhcCCE
Confidence 777788888777754 67889999999999999999999886332345677899999974 357888999886 6899
Q ss_pred EEEeCCCC----CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 389 MIRHYNNK----ELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 389 ~v~~~~~~----~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.+.++..+ ...+++||+++.. .+.+.+++++|
T Consensus 345 ~v~pg~~f~~~~~~~~~iRl~~~~~--~~~l~~~l~rl 380 (387)
T PRK08912 345 AAIPVSAFYEEDPVTSVVRFCFAKR--DATLDEAVERL 380 (387)
T ss_pred EEecchhhCCCCCCCCEEEEEEeCC--HHHHHHHHHHH
Confidence 99987653 2368999999975 37899998886
No 70
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=100.00 E-value=1.9e-44 Score=351.80 Aligned_cols=324 Identities=23% Similarity=0.328 Sum_probs=264.1
Q ss_pred HHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCc-chHHHHHHHHHHh----C---CCCCcEEEeCCHH
Q 014492 85 VLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDP-ESRRLRAALAKDS----G---LESDHILVGCGAD 156 (423)
Q Consensus 85 ~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y~~~-g~~~lr~~ia~~~----g---~~~~~i~~t~G~~ 156 (423)
.++......+.++++|+.+++..+.++.+.+++.+.....+|+++ |.+++|+++++++ | +++++|++|+|++
T Consensus 17 ~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~ 96 (364)
T PRK07865 17 PAKATAAAHPDGIVDLSVGTPVDPVPPVIQEALAAAADAPGYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSK 96 (364)
T ss_pred HHHHHHHhcCCCEEEcCCCCCCCCCCHHHHHHHHHHHhhCCCCCccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChH
Confidence 343333344567899999987777678888888764333578664 7899999999997 3 6689999999999
Q ss_pred HHHHHHHHHh-cCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCC
Q 014492 157 ELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII 235 (423)
Q Consensus 157 ~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~ 235 (423)
+++..++..+ +++||.|++++|+|+.|...++..|++++.++. +++++ +.++++|++++||||||.++
T Consensus 97 ~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~-------~~~l~----~~~~~~v~~~~p~NPtG~~~ 165 (364)
T PRK07865 97 ELVAWLPTLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRADS-------LTELG----PQRPALIWLNSPSNPTGRVL 165 (364)
T ss_pred HHHHHHHHHHcCCCCCEEEECCCCcccHHHHHHhcCCEEEecCC-------hhhCC----cccceEEEEcCCCCCCCccC
Confidence 9999988888 799999999999999999999999999998852 23322 25789999999999999999
Q ss_pred CHHHHHHHHcC----CCEEEEccCCccccCCCchhhhhc------cCCcEEEEccChhhhcccCccccccccCHHHHHHH
Q 014492 236 NDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVK------KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYL 305 (423)
Q Consensus 236 ~~~~l~~i~~~----~~~li~Deay~~~~~~~~~~~~~~------~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l 305 (423)
+.+++++|++. |++||+||+|.++.+++....... ..+++++++||||.||++|+|+||+++++++++.+
T Consensus 166 ~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~~~~~~~~ 245 (364)
T PRK07865 166 GVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGDPALVAEL 245 (364)
T ss_pred CHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCceeeEEEecCHHHHHHH
Confidence 99998888763 999999999998876442222111 34689999999999999999999999999999998
Q ss_pred HHhcC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHH
Q 014492 306 WRAKQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDL 383 (423)
Q Consensus 306 ~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L 383 (423)
..... .++++.+.|.++..+|++.+++++.++.++++++.+.+.|++.++....|.+++|+|++++ .+..++.+.|
T Consensus 246 ~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~l 323 (364)
T PRK07865 246 LEVRKHAGMMVPAPVQAAMVAALGDDAHVREQRERYARRRAVLRPALEAAGFRVDHSEAGLYLWATRG--EDCWDTVAWL 323 (364)
T ss_pred HHHHHhcCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCccEEEEEeCC--CCHHHHHHHH
Confidence 87653 4678999999999999988888999999999999999999987643334677889999884 4567888889
Q ss_pred HhCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhhC
Q 014492 384 AKMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHLY 423 (423)
Q Consensus 384 ~~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l~ 423 (423)
.++||.+.++..+. .++++||+++.. .+++.+++++|+
T Consensus 324 ~~~gv~v~pg~~f~~~~~~~iRi~~~~~--~~~~~~~~~~l~ 363 (364)
T PRK07865 324 AERGILVAPGDFYGPAGAQHVRVALTAT--DERIAAAVERLA 363 (364)
T ss_pred HHCCEEEeCccccCcCCCCEEEEEecCC--HHHHHHHHHHhh
Confidence 99999999977532 468999999864 378999998874
No 71
>PRK09082 methionine aminotransferase; Validated
Probab=100.00 E-value=2.9e-44 Score=353.13 Aligned_cols=326 Identities=22% Similarity=0.333 Sum_probs=273.0
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhcC-C-CCCCCC-CcchHHHHHHHHHHh----CC--CCC-cEEEeCCHHHHHHHHHH
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQL-K-FPYIYP-DPESRRLRAALAKDS----GL--ESD-HILVGCGADELIDLIMR 164 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Y~-~~g~~~lr~~ia~~~----g~--~~~-~i~~t~G~~~al~~~~~ 164 (423)
.++|+|+.|.+++++++.+.+++.+. . ....|+ ..|.+++|+++++++ |+ +++ +|++|+|+++++..++.
T Consensus 30 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~~~~ 109 (386)
T PRK09082 30 HGAINLSQGFPDFDGPPYLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEALFAAIL 109 (386)
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHHHHH
Confidence 46799999999999889888888763 2 225685 457899999999864 55 343 89999999999999999
Q ss_pred HhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHH
Q 014492 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243 (423)
Q Consensus 165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i 243 (423)
.++++||+|+++.|+|..+...++..|++++.++.+ +++.+|++++++.+. .+++++++++||||||.+++.+++++|
T Consensus 110 ~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~p~NPtG~~~~~~~~~~i 188 (386)
T PRK09082 110 ALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQPPDFRVDWQRFAAAIS-PRTRLIILNTPHNPSGTVWSAADMRAL 188 (386)
T ss_pred HHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccccCCHHHHHHhcC-ccceEEEEeCCCCCCCcCCCHHHHHHH
Confidence 999999999999999999999999999999999975 468899999999996 689999999999999999999998888
Q ss_pred HcC----CCEEEEccCCccccCCCc---hhhhh-ccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC--CCC
Q 014492 244 LEM----PILVVLDEAYTEFSGLES---RMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYN 313 (423)
Q Consensus 244 ~~~----~~~li~Deay~~~~~~~~---~~~~~-~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~--~~~ 313 (423)
++. ++++|+||+|.++.+++. ..... ...+++++++||||.||++|+|+||+++++++++.+.+... .++
T Consensus 189 ~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~~~l~~~~~~~~~~~~~~ 268 (386)
T PRK09082 189 WQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAPAALSAEFRKVHQYNTFT 268 (386)
T ss_pred HHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCCHHHHHHHHHHHhhhcCC
Confidence 764 999999999998876432 11222 23578999999999999999999999999999999888763 478
Q ss_pred CcHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCC--CCCHHHHHHHHH-hCCcE
Q 014492 314 VSVAAEVAACAALQ-NPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS--GMDAKKLKDDLA-KMGVM 389 (423)
Q Consensus 314 ~~~~~~~a~~~~l~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~--~~~~~~l~~~L~-~~gI~ 389 (423)
++.+.|.++..+++ .++++++.++.++++++.+.+.|++.+.....+.+++|+|+++++ +.+..++++.|. ++||.
T Consensus 269 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~ 348 (386)
T PRK09082 269 VNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAALANSRFKLLPCEGTYFQLVDYSAISDLDDVEFCQWLTREHGVA 348 (386)
T ss_pred CChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCeeEEEEEeccccCCCCHHHHHHHHHHhCCEE
Confidence 89999999999997 678889999999999999999998865332345677899999973 567899999875 88999
Q ss_pred EEeCCCC----CCCCeEEEEecChhhHHHHHHHHhhhC
Q 014492 390 IRHYNNK----ELKGYVRVSVGKPEHTDALMECLMHLY 423 (423)
Q Consensus 390 v~~~~~~----~~~~~iRis~~~~~~~~~l~~al~~l~ 423 (423)
+.+++.+ ...+++||+++.+ .+.+.+++++|+
T Consensus 349 v~pg~~f~~~~~~~~~~Ri~~~~~--~~~l~~~~~rl~ 384 (386)
T PRK09082 349 AIPLSVFYADPFPHRLVRLCFAKQ--EETLDAAAERLC 384 (386)
T ss_pred EeCcHHhCCCCCCCCEEEEEecCC--HHHHHHHHHHHh
Confidence 9998753 2357999999974 478999998874
No 72
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-45 Score=341.37 Aligned_cols=321 Identities=26% Similarity=0.378 Sum_probs=265.1
Q ss_pred cCCCCCCCCCCHHHHHHHhcCC-C--CCCC-CCcchHHHHHHHHHHh----C---CCCCcEEEeCCHHHHHHHHHHHhcC
Q 014492 100 IDANENPYGPPPEVREALGQLK-F--PYIY-PDPESRRLRAALAKDS----G---LESDHILVGCGADELIDLIMRCVLD 168 (423)
Q Consensus 100 l~~~~~~~~~~~~v~~al~~~~-~--~~~Y-~~~g~~~lr~~ia~~~----g---~~~~~i~~t~G~~~al~~~~~~l~~ 168 (423)
|++|.+++++|+-+.+++.++. . .++| +..|.++|+++|++.+ | ...++|++|.|+.+++..++..+++
T Consensus 36 LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~ 115 (420)
T KOG0257|consen 36 LGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLLN 115 (420)
T ss_pred ccCCCCCCCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHcC
Confidence 9999999999999999998742 2 2455 6667777777777654 3 2456899999999999999999999
Q ss_pred CCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--------CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHH
Q 014492 169 PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--------SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL 240 (423)
Q Consensus 169 ~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--------~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l 240 (423)
+||+|++.+|.|..|....+++|++++.|+.. .+|.+|++.++.++. +++|+|++|+||||||.++++++|
T Consensus 116 ~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t-~kTk~Ii~ntPhNPtGkvfsReeL 194 (420)
T KOG0257|consen 116 PGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKIT-EKTKAIILNTPHNPTGKVFSREEL 194 (420)
T ss_pred CCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhcc-CCccEEEEeCCCCCcCcccCHHHH
Confidence 99999999999999999999999999999954 578999999999998 799999999999999999999999
Q ss_pred HHHHcC----CCEEEEccCCccccCCCc-h---hhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC-
Q 014492 241 LKILEM----PILVVLDEAYTEFSGLES-R---MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP- 311 (423)
Q Consensus 241 ~~i~~~----~~~li~Deay~~~~~~~~-~---~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~- 311 (423)
++|+++ |+++|.||+|..+.+++. + ....+.+++++.++|+||.||+.|||+||+++++.++..+....+.
T Consensus 195 e~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp~~L~~~~~~vh~~~ 274 (420)
T KOG0257|consen 195 ERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGPKHLYSALFPVHQNF 274 (420)
T ss_pred HHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeeeeeeeeeechHHhhhhHHHHhhcc
Confidence 999886 999999999999987764 2 2234568999999999999999999999999999999988887765
Q ss_pred -CCCcHHHHHHHHHHhCCh---------HHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeC--------CC
Q 014492 312 -YNVSVAAEVAACAALQNP---------IYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVT--------SG 373 (423)
Q Consensus 312 -~~~~~~~~~a~~~~l~~~---------~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~--------~~ 373 (423)
+.++.+.|.|..+++..+ .+..++.+.++++|+.|.+.|++++.-...|+++.|+|++++ ++
T Consensus 275 ~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~lg~~v~~p~gayyl~adfs~~~~~~~~~~ 354 (420)
T KOG0257|consen 275 VFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEELGLKVTGPEGAYYLWADFSLAKSWPFFEE 354 (420)
T ss_pred ccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCceEEEEeccccccCCcchh
Confidence 577888888888777653 345569999999999999999999755567899999999997 11
Q ss_pred C----CHHHHHHHHH-hCCcEEEeCCCCCCC-------CeEEEEecChhhHHHHHHHHhhhC
Q 014492 374 M----DAKKLKDDLA-KMGVMIRHYNNKELK-------GYVRVSVGKPEHTDALMECLMHLY 423 (423)
Q Consensus 374 ~----~~~~l~~~L~-~~gI~v~~~~~~~~~-------~~iRis~~~~~~~~~l~~al~~l~ 423 (423)
. +.-.+...|. +.|+.+.|.+.+..+ +.+|+++...+ +.|..++++|+
T Consensus 355 ~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~~k~~--~~L~~a~e~l~ 414 (420)
T KOG0257|consen 355 ILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCFCKAD--ETLRKAIERLK 414 (420)
T ss_pred hccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHHHHhhH--HHHHHHHHHHh
Confidence 1 2344567776 789999887764443 35666666543 66888877763
No 73
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=3.2e-44 Score=356.96 Aligned_cols=333 Identities=20% Similarity=0.241 Sum_probs=262.1
Q ss_pred HHhCCCCCCeeEcCCCCC---CCCCCHHHHHHHhcC---CCCCCC-CCcchHHHHHHHHHHh----C--CCCCcEEEeCC
Q 014492 88 IQLGRKPEDIVKIDANEN---PYGPPPEVREALGQL---KFPYIY-PDPESRRLRAALAKDS----G--LESDHILVGCG 154 (423)
Q Consensus 88 ~~~~~~~~~~i~l~~~~~---~~~~~~~v~~al~~~---~~~~~Y-~~~g~~~lr~~ia~~~----g--~~~~~i~~t~G 154 (423)
++....+.++++++.|++ ++.+|+.+.+++.+. ....+| +..|.++||+++++++ | +++++|++|+|
T Consensus 25 ~~~~~~g~~~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G 104 (433)
T PRK06855 25 KKLEKLGVKITWENIGDPIAKGEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNG 104 (433)
T ss_pred HHHHhccccccccccCCCcccCCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCc
Confidence 333344567899999988 678888888887763 122568 4568999999999997 3 57889999999
Q ss_pred HHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHH-HHCCCeEEEecCC--CCCCCCHHHHHHHhhc-CCceEEEEcCCCCC
Q 014492 155 ADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA-AVNGAAVVKVPRK--SDFSLNVELIADAVER-EKPKCIFLTSPNNP 230 (423)
Q Consensus 155 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~-~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~-~~~~~i~l~~p~NP 230 (423)
+++++..++. ++++||.|++++|+|+.|.... ...|++++.+|.+ ++|.+|++++++.+.. .+++++++++||||
T Consensus 105 ~~~al~~~~~-l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NP 183 (433)
T PRK06855 105 LGDAIAKIYG-LLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAGILLINPDNP 183 (433)
T ss_pred HHHHHHHHHH-hcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCCceEEEEECCCCC
Confidence 9999999986 8899999999999999887543 3469999999864 4678999999999863 46799999999999
Q ss_pred cCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhccCCcEEEEccChhhhcccCccccccccC-----
Q 014492 231 DGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP----- 298 (423)
Q Consensus 231 tG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~----- 298 (423)
||.+++.+++++|++. +++||+||+|.++.+.+. ....+....++|+++||||.|++||+|+||++++
T Consensus 184 TG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~ 263 (433)
T PRK06855 184 TGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADKD 263 (433)
T ss_pred CCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCchh
Confidence 9999999999998764 999999999999876432 2222222236799999999999999999999973
Q ss_pred H---HHHHHHHHhcC-CCCCcHHHHHHHHHHhCCh---HHHHHHHHHHHHHHHHHHHHHccCCCCe-ecCCCceEEEEEe
Q 014492 299 L---SIIEYLWRAKQ-PYNVSVAAEVAACAALQNP---IYLEKVKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEV 370 (423)
Q Consensus 299 ~---~~~~~l~~~~~-~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~~~~~~~ 370 (423)
+ .+++.+..... ..+.+.+.|.++..++++. +|+++.++.++++++.+.+.|++++++. ..|.+|+|+|+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~w~~l 343 (433)
T PRK06855 264 EVFKKYINSILNAKMIEVCSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLKVNRTNGAFYMTVVF 343 (433)
T ss_pred hHHHHHHHHHHHhhccccCCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeccCCCeeEEEeecc
Confidence 2 23343433322 2467889999999999873 6789999999999999999998875444 3577889999999
Q ss_pred CCCC---------------------------CHHHHHHHH-HhCCcEEEeCCCCC-CCCeEEEEecChhhHHHHHHHHhh
Q 014492 371 TSGM---------------------------DAKKLKDDL-AKMGVMIRHYNNKE-LKGYVRVSVGKPEHTDALMECLMH 421 (423)
Q Consensus 371 ~~~~---------------------------~~~~l~~~L-~~~gI~v~~~~~~~-~~~~iRis~~~~~~~~~l~~al~~ 421 (423)
|++. +..+++..| .++||.+.||..+. ...++||+++... .++|.+++++
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rls~~~~~-~~~i~~~~~~ 422 (433)
T PRK06855 344 EDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFRVTLLERD-EEKFEWIYQT 422 (433)
T ss_pred ccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceEEEECCCc-HHHHHHHHHH
Confidence 8542 355667665 48899999998753 2347999999744 4889999988
Q ss_pred h
Q 014492 422 L 422 (423)
Q Consensus 422 l 422 (423)
|
T Consensus 423 l 423 (433)
T PRK06855 423 L 423 (433)
T ss_pred H
Confidence 6
No 74
>PTZ00377 alanine aminotransferase; Provisional
Probab=100.00 E-value=1.3e-44 Score=364.41 Aligned_cols=328 Identities=18% Similarity=0.251 Sum_probs=257.3
Q ss_pred CCCCeeEcCCCCCC----------------CCC-------------CHHHHHHHhc----CC-CCCCCCCc-chHHHHHH
Q 014492 93 KPEDIVKIDANENP----------------YGP-------------PPEVREALGQ----LK-FPYIYPDP-ESRRLRAA 137 (423)
Q Consensus 93 ~~~~~i~l~~~~~~----------------~~~-------------~~~v~~al~~----~~-~~~~Y~~~-g~~~lr~~ 137 (423)
++.++|+|+.|+++ +.+ |..+.+++.+ .. ....|++. |.++||++
T Consensus 44 ~~~~vi~~~~G~p~~~~~~~~~~~~~~~~~~~~p~~i~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~a 123 (481)
T PTZ00377 44 PFDSIVYCNIGNPQALGQKPLTFYRQVLSLVEYPFLLEDPSVSSLFPADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKA 123 (481)
T ss_pred CcceeEEcCCCChhhcCCCCchHHHHHHHHccChhhhcCccccccCCHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHH
Confidence 45799999999995 554 3356666543 11 22558554 89999999
Q ss_pred HHHHhC------CCCCcEEEeCCHHHHHHHHHHHhc-CCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHH
Q 014492 138 LAKDSG------LESDHILVGCGADELIDLIMRCVL-DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVE 208 (423)
Q Consensus 138 ia~~~g------~~~~~i~~t~G~~~al~~~~~~l~-~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~ 208 (423)
++++++ +++++|++|+|+++++.+++++++ ++||.|+++.|+|+.|...++..|++++.++++ ++|.+|++
T Consensus 124 ia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~ 203 (481)
T PTZ00377 124 VAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMIPIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQE 203 (481)
T ss_pred HHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEECCCCchhHHHHHHHcCCEEEEEEeccccCCCCCHH
Confidence 999973 578999999999999999999998 799999999999999999999999999999964 45789999
Q ss_pred HHHHHhhc-----CCceEEEEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCC--chh---hh---hcc
Q 014492 209 LIADAVER-----EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE--SRM---EW---VKK 271 (423)
Q Consensus 209 ~l~~~i~~-----~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~--~~~---~~---~~~ 271 (423)
++++.+.+ .++|+++++|||||||.+++.+++++|++. +++||+||+|.++.+++ ... .. +..
T Consensus 204 ~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~ 283 (481)
T PTZ00377 204 ELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPA 283 (481)
T ss_pred HHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcc
Confidence 99999863 179999999999999999999988888764 99999999999987632 111 11 111
Q ss_pred ----CCcEEEEccChhh-hcccCcccccccc---CHHHHHHHHHhcCC-CCCcHHHHHHHHHHhCCh--------HHHH-
Q 014492 272 ----HDNLIVLRTFSKR-AGLAGLRVGYGAF---PLSIIEYLWRAKQP-YNVSVAAEVAACAALQNP--------IYLE- 333 (423)
Q Consensus 272 ----~~~~i~i~S~SK~-~g~~G~R~G~i~~---~~~~~~~l~~~~~~-~~~~~~~~~a~~~~l~~~--------~~~~- 333 (423)
..++++++||||. ++++|+|+||+++ ++++++++.+.... ++.+.++|.++..++++. .+.+
T Consensus 284 ~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li~~l~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~ 363 (481)
T PTZ00377 284 EYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQIYKLASINLCSNVVGQLMTGLMCNPPREGDASYPLYKRE 363 (481)
T ss_pred cccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHHHHHHHHhheecCCChHHHHHHHHHhCCCCCCcccHHHHHHH
Confidence 1268999999997 6999999999986 89999999887654 478999999999999641 2333
Q ss_pred --HHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeC--CCC----------CHHHHHHHH-HhCCcEEEeCCCCC
Q 014492 334 --KVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVT--SGM----------DAKKLKDDL-AKMGVMIRHYNNKE 397 (423)
Q Consensus 334 --~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~--~~~----------~~~~l~~~L-~~~gI~v~~~~~~~ 397 (423)
+.++.++++++.+.+.|++++++.+ .|++|+|+|++++ .+. +...++..+ .++||.+.||+.++
T Consensus 364 ~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~ 443 (481)
T PTZ00377 364 RDAIFTSLKRRAELLTDELNKIEGVSCQPVEGAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFG 443 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcEeecCCeeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccC
Confidence 3344578999999999998866654 5678899997763 211 233454444 58899999988753
Q ss_pred ---CCCeEEEEecChhhHHHHHHHHhhh
Q 014492 398 ---LKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 398 ---~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.++++||+++.. .+++.+++++|
T Consensus 444 ~~~~~~~~Rls~~~~--~e~l~~~l~rl 469 (481)
T PTZ00377 444 QKPGTYHFRITILPP--EEQIEEMVKKI 469 (481)
T ss_pred CCCCCCEEEEEECCC--HHHHHHHHHHH
Confidence 356999999944 36788888776
No 75
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=2.1e-44 Score=330.86 Aligned_cols=331 Identities=25% Similarity=0.369 Sum_probs=277.7
Q ss_pred HhCCCC--CCeeEcCCCCCCCCCCHHHHHHHhc-CCCC-CCCCCcchHHHHHHHHHHh------CCCCCcEEEeCCHHHH
Q 014492 89 QLGRKP--EDIVKIDANENPYGPPPEVREALGQ-LKFP-YIYPDPESRRLRAALAKDS------GLESDHILVGCGADEL 158 (423)
Q Consensus 89 ~~~~~~--~~~i~l~~~~~~~~~~~~v~~al~~-~~~~-~~Y~~~g~~~lr~~ia~~~------g~~~~~i~~t~G~~~a 158 (423)
+|...+ +|++.|...+++|+.+|+|++|+.+ +.++ ++|| .+.+++-+++++|+ .++++.|++++|...+
T Consensus 17 KWd~~~g~~DvlPmWVADMDf~~pp~i~~Al~~rvdhGvfGY~-~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpg 95 (388)
T COG1168 17 KWDAHPGNEDVLPMWVADMDFPTPPEIIEALRERVDHGVFGYP-YGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPG 95 (388)
T ss_pred eccccCCCCCcceeeeecccCCCCHHHHHHHHHHHhcCCCCCC-CCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHh
Confidence 344444 7899999999999999999999998 5554 7788 45567888888774 5688999999999999
Q ss_pred HHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC---CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCC
Q 014492 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR---KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII 235 (423)
Q Consensus 159 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~---~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~ 235 (423)
+..+++.|.++||.|++..|.|+++....+..|.+++..|+ +..+.+|+++|++.+.++++|++++||||||||+++
T Consensus 96 i~~~I~~~T~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvw 175 (388)
T COG1168 96 ISLAIRALTKPGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVW 175 (388)
T ss_pred HHHHHHHhCcCCCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCccc
Confidence 99999999999999999999999999999999999999994 345677999999999878899999999999999999
Q ss_pred CHHHHHHHHcC----CCEEEEccCCccccCCC-chhh--hhcc--CCcEEEEccChhhhcccCccccccccC-HHHHHHH
Q 014492 236 NDEDLLKILEM----PILVVLDEAYTEFSGLE-SRME--WVKK--HDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYL 305 (423)
Q Consensus 236 ~~~~l~~i~~~----~~~li~Deay~~~~~~~-~~~~--~~~~--~~~~i~i~S~SK~~g~~G~R~G~i~~~-~~~~~~l 305 (423)
+.+||.+|++. |++||+||+|+++.+.+ .+.. .++. .++.+++.|.||+|+++|+++++++.+ ++..+++
T Consensus 176 t~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~ 255 (388)
T COG1168 176 TKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKF 255 (388)
T ss_pred cHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHHHHH
Confidence 99999988775 99999999999998755 3322 2222 588999999999999999999988874 4544444
Q ss_pred HHh-c--CCCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHcc-CCCCeec-CCCceEEEEEeCC-CCCHHH
Q 014492 306 WRA-K--QPYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKD-VPFLNPY-PSYSNFILCEVTS-GMDAKK 378 (423)
Q Consensus 306 ~~~-~--~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~-p~~~~~~~~~~~~-~~~~~~ 378 (423)
.+. . ...++|.++..|..++++. +.|++++.++++.|++++.+.|++ +|++.+. |++++.+|+++.+ +.+..+
T Consensus 256 ~~~l~~~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~p~gTYL~WLD~r~l~l~d~~ 335 (388)
T COG1168 256 LKRLKRNGLHGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPGVKVTEPQGTYLAWLDCRELGLDDSE 335 (388)
T ss_pred HHHHHHhcCCCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEecCCCceeeeeeccccCCChHH
Confidence 432 2 2367899999999999988 579999999999999999999976 7888875 5555567999875 677789
Q ss_pred HHHHHH-hCCcEEEeCCC--CCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 379 LKDDLA-KMGVMIRHYNN--KELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 379 l~~~L~-~~gI~v~~~~~--~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
+.+.|+ +.+|.+.+|.. ..+.|++|++++++. ..|.+++++|
T Consensus 336 l~~~ll~~akVal~~G~~FG~~g~gf~RlN~acpr--~~L~eal~ri 380 (388)
T COG1168 336 LAEFLLEEAKVALSPGSTFGEEGSGFVRLNFACPR--AILEEALERL 380 (388)
T ss_pred HHHHHHHhhcEeccCCCccCcCCCceEEEecCCCH--HHHHHHHHHH
Confidence 999988 78999999887 455789999999876 5688888876
No 76
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=9.7e-44 Score=349.84 Aligned_cols=326 Identities=27% Similarity=0.385 Sum_probs=267.2
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhcC-C-CCCCC-CCcchHHHHHHHHHHh----CC--C-CCcEEEeCCHHHHHHHHHH
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQL-K-FPYIY-PDPESRRLRAALAKDS----GL--E-SDHILVGCGADELIDLIMR 164 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Y-~~~g~~~lr~~ia~~~----g~--~-~~~i~~t~G~~~al~~~~~ 164 (423)
.++|+|+.|++++++++.+.+++.+. . ....| |..|.+++|+++++++ |+ + +++|++|+|+++++.+++.
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~ 109 (391)
T PRK07309 30 PGILKLTLGEPDFTTPDHVKEAAKRAIDANQSHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEALSASLT 109 (391)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHH
Confidence 46899999999999998888888763 2 22458 4557899999999987 33 3 4799999999999999999
Q ss_pred HhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC-CCCCCHHHHHHHhhc--CCceEEEEcCCCCCcCcCCCHHHHH
Q 014492 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVER--EKPKCIFLTSPNNPDGSIINDEDLL 241 (423)
Q Consensus 165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~~~~~~l~ 241 (423)
.++++||+|++++|+|..+...++..|++++.++.+. ++.+|++.+++.+.+ .+++++++++||||||.+++.++++
T Consensus 110 ~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~ 189 (391)
T PRK07309 110 AILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTENDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVTYSREQIK 189 (391)
T ss_pred HhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHH
Confidence 9999999999999999999999999999999999643 568999999998863 3689999999999999999988888
Q ss_pred HHHcC----CCEEEEccCCccccCCCc-hhhhhc-cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC--CC
Q 014492 242 KILEM----PILVVLDEAYTEFSGLES-RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YN 313 (423)
Q Consensus 242 ~i~~~----~~~li~Deay~~~~~~~~-~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~--~~ 313 (423)
+|++. ++++|+||+|.++.+++. ...... ..+++++++||||.||++|+|+||+++++++++.+...... .+
T Consensus 190 ~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRvG~~v~~~~~~~~~~~~~~~~~~~ 269 (391)
T PRK07309 190 ALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGWRIGLIFAPAEFTAQLIKSHQYLVTA 269 (391)
T ss_pred HHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhccCccceeEEEEeCHHHHHHHHHHHhhcccC
Confidence 88764 999999999999886332 111111 34789999999999999999999999999999998876432 46
Q ss_pred CcHHHHHHHHHHhCCh-HHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCC--CHHHHHHHHH-hCCcE
Q 014492 314 VSVAAEVAACAALQNP-IYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGM--DAKKLKDDLA-KMGVM 389 (423)
Q Consensus 314 ~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~--~~~~l~~~L~-~~gI~ 389 (423)
++.++|.++..+|++. .+....++.++++++.+.+.|++.++....|.+++|+|+++|++. ++.++++.|. ++||.
T Consensus 270 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~gg~~~~~~l~~~~~~~~~~~~~~l~~~~gv~ 349 (391)
T PRK07309 270 ATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTDLGFKIIKPDGAFYIFAKIPAGYNQDSFKFLQDFARKKAVA 349 (391)
T ss_pred CChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeeEEEEEECCCCCCCCHHHHHHHHHHhCCEE
Confidence 7889999999999874 445667888899999999999888633335677889999998543 5778887765 78999
Q ss_pred EEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 390 IRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 390 v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
+.++..+ ..++++||+++.. .+++.+++++|
T Consensus 350 v~pg~~f~~~~~~~iRi~~~~~--~~~l~~~i~~l 382 (391)
T PRK07309 350 FIPGAAFGPYGEGYVRLSYAAS--METIKEAMKRL 382 (391)
T ss_pred EeCchhhCCCCCCEEEEEecCC--HHHHHHHHHHH
Confidence 9998763 3468999999864 36788888776
No 77
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=2.7e-44 Score=349.68 Aligned_cols=326 Identities=24% Similarity=0.335 Sum_probs=267.4
Q ss_pred hHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCc-chHHHHHHHHHHh-------CCCCCcEEEeCC
Q 014492 83 FEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDP-ESRRLRAALAKDS-------GLESDHILVGCG 154 (423)
Q Consensus 83 ~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y~~~-g~~~lr~~ia~~~-------g~~~~~i~~t~G 154 (423)
+..++.+....+.++++|+.+++..++++.+.+++.+......|+++ |.++||+++++++ |+++++|++|+|
T Consensus 9 ~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G 88 (357)
T TIGR03539 9 LAPYKAKAASHPDGIVDLSVGTPVDPVPPLIRAALAAAADAPGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIG 88 (357)
T ss_pred HHHHHHHhhhCCCCeEEccCCCCCCCCCHHHHHHHHHHHhhCCCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccC
Confidence 34445555556677899999988888788888888764334678765 7899999999997 477899999999
Q ss_pred HHHHHHHHHHHh-cCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCc
Q 014492 155 ADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS 233 (423)
Q Consensus 155 ~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~ 233 (423)
+++++..++..+ +++||.|++++|+|+.+...++..|++++.++ |++++ ...++++|++++|+||||.
T Consensus 89 ~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~-------~~~~l----~~~~~~~v~~~~p~NPtG~ 157 (357)
T TIGR03539 89 TKELVAWLPTLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAAD-------DPTEL----DPVGPDLIWLNSPGNPTGR 157 (357)
T ss_pred hHHHHHHHHHHHcCCCCCEEEECCCCcHHHHHHHHhcCCEEeccC-------Chhhc----CccCccEEEEeCCCCCcCc
Confidence 999999999887 79999999999999999999999999998875 22222 2257899999999999999
Q ss_pred CCCHHHHHHHHcC----CCEEEEccCCccccCCCchhhhhc------cCCcEEEEccChhhhcccCccccccccCHHHHH
Q 014492 234 IINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVK------KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 303 (423)
Q Consensus 234 ~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~~~~~~------~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~ 303 (423)
+++.+++++|++. |+++|+||+|.++.+++.....+. ..+++++++||||.||++|+|+||+++++++++
T Consensus 158 ~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~~~~~~~ 237 (357)
T TIGR03539 158 VLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAGDPALVA 237 (357)
T ss_pred cCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCceeEEEEecCHHHHH
Confidence 9999998887754 999999999998876543222221 246899999999999999999999999999999
Q ss_pred HHHHhcC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHH
Q 014492 304 YLWRAKQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKD 381 (423)
Q Consensus 304 ~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~ 381 (423)
.+.+... .++++.++|.++..+|++..+++..++.++++++.+.+.|++.+.....|.+++|+|++++ .+..++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~p~~~~~~~~~~~--~~~~~~~~ 315 (357)
T TIGR03539 238 ELLTVRKHAGLMVPAPVQAAMVAALGDDGHVAEQKARYAARRAQLKPALEKAGFRIDHSEAGLYLWATRG--EDAWDTVD 315 (357)
T ss_pred HHHHHHhhcccCCCHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCCccEEEEEECC--CCHHHHHH
Confidence 8877654 3678899999999999887888888999999999999999887533345677889999985 36778999
Q ss_pred HHHhCCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhhC
Q 014492 382 DLAKMGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHLY 423 (423)
Q Consensus 382 ~L~~~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l~ 423 (423)
.|.++||.|.++..+ ..++++||+++.. .+++.+++++|.
T Consensus 316 ~l~~~gV~v~pg~~f~~~~~~~iRis~~~~--~~~i~~~~~~l~ 357 (357)
T TIGR03539 316 RLAELGILVAPGDFYGPAGSQHVRVALTAT--DERIAAAVARLT 357 (357)
T ss_pred HHHhCCEEECCccccCCCCCCeEEEEecCC--HHHHHHHHHhhC
Confidence 999999999998753 3468999999974 388999999874
No 78
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-43 Score=350.75 Aligned_cols=327 Identities=22% Similarity=0.340 Sum_probs=273.1
Q ss_pred CCCCeeEcCCCCCCCCCCHHHHHHHhcC-C-CCCCCCCc-chHHHHHHHHHHh----CC--CCCcEEEeCCHHHHHHHHH
Q 014492 93 KPEDIVKIDANENPYGPPPEVREALGQL-K-FPYIYPDP-ESRRLRAALAKDS----GL--ESDHILVGCGADELIDLIM 163 (423)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Y~~~-g~~~lr~~ia~~~----g~--~~~~i~~t~G~~~al~~~~ 163 (423)
.+.++++|+.|.+++++++.+.+++.+. . ...+|+++ |.++||+++++++ |+ ++++|++|+|+++++..++
T Consensus 31 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~ 110 (402)
T PRK06107 31 AGRSIVDLTVGEPDFDTPDHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFLAL 110 (402)
T ss_pred ccCCEEEcCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHH
Confidence 3457899999999999889888888763 2 23568654 7899999998875 54 6789999999999999999
Q ss_pred HHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHH
Q 014492 164 RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL 241 (423)
Q Consensus 164 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~ 241 (423)
.+++++||.|++++|+|..|...+...|++++.++.+ +++.+|++++++.+. .+++++++++|+||||.+++.++++
T Consensus 111 ~~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~NPtG~~~s~~~~~ 189 (402)
T PRK06107 111 MATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAIT-PRTRWLILNAPSNPTGAVYSRAELR 189 (402)
T ss_pred HHhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcC-cCceEEEEECCCCCCCcCcCHHHHH
Confidence 9999999999999999999998888899999888864 457799999999986 6899999999999999999999998
Q ss_pred HHHc----C-CCEEEEccCCccccCCCch---hhhhc--cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC-
Q 014492 242 KILE----M-PILVVLDEAYTEFSGLESR---MEWVK--KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ- 310 (423)
Q Consensus 242 ~i~~----~-~~~li~Deay~~~~~~~~~---~~~~~--~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~- 310 (423)
+|++ . ++++|+||+|.++.+.+.. ..... ..+++++++||||.||++|+|+||+++++++++.+.....
T Consensus 190 ~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~~~~~~~~~~~~~~~ 269 (402)
T PRK06107 190 ALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGPADLIAAINKLQSQ 269 (402)
T ss_pred HHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeecCHHHHHHHHHHHHh
Confidence 8875 3 7899999999987654321 12221 2468999999999999999999999999999999988775
Q ss_pred -CCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeC--------CC---CCH
Q 014492 311 -PYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVT--------SG---MDA 376 (423)
Q Consensus 311 -~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~--------~~---~~~ 376 (423)
.++++.++|.++..+|+. ..|+++.++.++++++.+.+.|++++++.+ .|.+|+|+|++++ .+ .+.
T Consensus 270 ~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~p~gg~~~~~~~~~~~~~~~~~~~~~~~~ 349 (402)
T PRK06107 270 SSSCPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNAIPGLSCLVPDGAFYLYVNCAGLIGKTTPEGKVLETD 349 (402)
T ss_pred cccCCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEeeecccccccccccccCCCCH
Confidence 467899999999999974 578899999999999999999988755554 4678899999873 12 256
Q ss_pred HHHHHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 377 KKLKDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 377 ~~l~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.++.+.|. ++||.+++|..++..+++||+++.+ .+++.+++++|
T Consensus 350 ~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~~~~--~e~l~~~l~~l 394 (402)
T PRK06107 350 QDVVLYLLDSAGVAVVQGTAYGLSPYFRLSIATS--LETLEEACARI 394 (402)
T ss_pred HHHHHHHHHhCCEEEeCccccCCCCeEEEEeCCC--HHHHHHHHHHH
Confidence 77777665 7899999998877789999999974 47899988876
No 79
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=9.8e-44 Score=351.42 Aligned_cols=332 Identities=21% Similarity=0.307 Sum_probs=259.5
Q ss_pred HHhCCCCCCeeEcCCCCC---CCCCCHHHHHHHhc-CCCCCCCCCc-chHHHHHHHHHHh------CCCCCcEEEeCCHH
Q 014492 88 IQLGRKPEDIVKIDANEN---PYGPPPEVREALGQ-LKFPYIYPDP-ESRRLRAALAKDS------GLESDHILVGCGAD 156 (423)
Q Consensus 88 ~~~~~~~~~~i~l~~~~~---~~~~~~~v~~al~~-~~~~~~Y~~~-g~~~lr~~ia~~~------g~~~~~i~~t~G~~ 156 (423)
.+....+.++++|+.|.+ ++++++.+.+++.+ ......|+++ |.++||+++++++ ++++++|++|+|++
T Consensus 26 ~~~~~~~~~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~ 105 (404)
T PRK09265 26 KRLEEEGHKILKLNIGNPAPFGFEAPDEILRDVIRNLPTAQGYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNGVS 105 (404)
T ss_pred HHHHHcCCCeEEecCCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEEeCChH
Confidence 333334567899999755 45688888888765 3334678765 6789999999998 68899999999999
Q ss_pred HHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcC
Q 014492 157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI 234 (423)
Q Consensus 157 ~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~ 234 (423)
+++..+++.++++||+|++++|+|..+...++..|++++.++.+ +++.+|++++++.+. .++++|+++|||||||.+
T Consensus 106 ~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~P~NPtG~~ 184 (404)
T PRK09265 106 ELIVMAMQALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKIT-PRTKAIVIINPNNPTGAV 184 (404)
T ss_pred HHHHHHHHHhCCCCCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHhcc-ccceEEEEECCCCCCCcC
Confidence 99999999999999999999999999999999999999998854 357799999999986 689999999999999999
Q ss_pred CCHHHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhccCCcEEEEccChhhhcccCcccccccc--CHH----H
Q 014492 235 INDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF--PLS----I 301 (423)
Q Consensus 235 ~~~~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~--~~~----~ 301 (423)
++.+++++|++. |++||+||+|.++.+++. .........++++++||||.||++|+|+||+++ +++ +
T Consensus 185 ~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~ 264 (404)
T PRK09265 185 YSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKHAKGY 264 (404)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceEEEEEeCchHHHHHH
Confidence 997777777653 899999999999876432 222222334689999999999999999999995 443 4
Q ss_pred HHHHHHhc-CCCCCcHHHHHHHHHHhCChHHHHH---HHHHHHHHHHHHHHHHccCCCCe-ecCCCceEEEEEeCCCC--
Q 014492 302 IEYLWRAK-QPYNVSVAAEVAACAALQNPIYLEK---VKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSGM-- 374 (423)
Q Consensus 302 ~~~l~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~---~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~~~~~~~~~~~-- 374 (423)
++.+.... ..+++|.++|.++..+|.+.++.++ ..++++++++.+.+.|++++++. ..|++|+|+|++++...
T Consensus 265 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~~l~~~~~~~~~~ 344 (404)
T PRK09265 265 IEGLDMLASMRLCANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAIPGVSCVKPKGALYAFPKLDPKVYP 344 (404)
T ss_pred HHHHHHHhccccCCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEEEEecccccC
Confidence 44443332 2367889999999999976443332 23467788999999998875554 45788999999997432
Q ss_pred --CH-HHHHHHHHhCCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 375 --DA-KKLKDDLAKMGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 375 --~~-~~l~~~L~~~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
+. +.+.+.|.++||.+.++..+ ..++++||+++.. .+++.+++++|
T Consensus 345 ~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~~~--~e~l~~~l~rl 395 (404)
T PRK09265 345 IHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTLPR--VDDLEEAIGRI 395 (404)
T ss_pred CCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeCCC--HHHHHHHHHHH
Confidence 33 44666677999999998764 3468999999743 36788888776
No 80
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=1.1e-43 Score=349.11 Aligned_cols=325 Identities=24% Similarity=0.373 Sum_probs=270.0
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhcC-C-CCCCCC-CcchHHHHHHHHHHh----C--CCCC-cEEEeCCHHHHHHHHHH
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQL-K-FPYIYP-DPESRRLRAALAKDS----G--LESD-HILVGCGADELIDLIMR 164 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Y~-~~g~~~lr~~ia~~~----g--~~~~-~i~~t~G~~~al~~~~~ 164 (423)
+++++|+.+.+.+++++.+.+++.+. . ....|+ ..|..+||+++++++ | ++++ +|++|+|+++++.++++
T Consensus 28 ~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~~~~ 107 (387)
T PRK07683 28 DNLISLTIGQPDFPTPSHVKEAAKRAITENYTSYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAIDIAFR 107 (387)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHH
Confidence 46799999998888888888888773 2 235684 568899999999997 4 4677 99999999999999999
Q ss_pred HhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHH
Q 014492 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243 (423)
Q Consensus 165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i 243 (423)
.++++||.|+++.|+|..|...++..|++++.++.+ +++.+|.+++++.+. .+++++++++||||||.+++.+++++|
T Consensus 108 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~i~i~~p~NPtG~~~s~~~~~~l 186 (387)
T PRK07683 108 TILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTRSTGFRLTAEALENAIT-EKTRCVVLPYPSNPTGVTLSKEELQDI 186 (387)
T ss_pred HhCCCCCEEEEcCCCccchHHHHHHcCCEEEEeecCcccCCCCHHHHHHhcC-cCceEEEEeCCCCCCCcCCCHHHHHHH
Confidence 999999999999999999999999999999999965 467789999999986 689999999999999999999988888
Q ss_pred HcC----CCEEEEccCCccccCCCch--hhhh-ccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC--CCC
Q 014492 244 LEM----PILVVLDEAYTEFSGLESR--MEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNV 314 (423)
Q Consensus 244 ~~~----~~~li~Deay~~~~~~~~~--~~~~-~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~--~~~ 314 (423)
++. |+++|+||+|.++.+++.. .... +..+++++++||||.||+||+|+||+++++++++++.+.... .++
T Consensus 187 ~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~~~~l~~~~~~~~~~~~~~~ 266 (387)
T PRK07683 187 ADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFAPSYLAKHILKVHQYNVTCA 266 (387)
T ss_pred HHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCCeEEEeeccccccCccceeEEEEcCHHHHHHHHHHHHhccCCC
Confidence 764 8999999999998764322 1222 235689999999999999999999999999999988866432 346
Q ss_pred cHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCC-CCCHHHHHHHH-HhCCcEEE
Q 014492 315 SVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS-GMDAKKLKDDL-AKMGVMIR 391 (423)
Q Consensus 315 ~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~-~~~~~~l~~~L-~~~gI~v~ 391 (423)
+.++|.++..+|.+ ..++++.+++++++++.+.+.|++.+.....|++++|+|+.++. +.++.++...+ .++||.+.
T Consensus 267 ~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~ 346 (387)
T PRK07683 267 SSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLISMGLDVEKPTGAFYLFPSIGHFTMSSFDFALDLVEEAGLAVV 346 (387)
T ss_pred ChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCeeEEEEEecccCCCCHHHHHHHHHHhCCEEEc
Confidence 77899999999976 46788889999999999999998875333456778899998874 56777888765 58899999
Q ss_pred eCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 392 HYNNK--ELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 392 ~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
++..+ ..++++||+++.. .+++.+++++|
T Consensus 347 pg~~f~~~~~~~~Ri~~~~~--~~~~~~al~~l 377 (387)
T PRK07683 347 PGSAFSEYGEGYVRLSYAYS--IETLKEGLDRL 377 (387)
T ss_pred CchhhCCCCCCeEEEEecCC--HHHHHHHHHHH
Confidence 98763 3368999999974 47899998886
No 81
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=9.1e-44 Score=351.09 Aligned_cols=330 Identities=25% Similarity=0.377 Sum_probs=267.8
Q ss_pred hCCCCCCeeEcCCCCC---CCCCCHHHHHHHhcC-C-CCCCCC-CcchHHHHHHHHHHh----C--CCCCcEEEeCCHHH
Q 014492 90 LGRKPEDIVKIDANEN---PYGPPPEVREALGQL-K-FPYIYP-DPESRRLRAALAKDS----G--LESDHILVGCGADE 157 (423)
Q Consensus 90 ~~~~~~~~i~l~~~~~---~~~~~~~v~~al~~~-~-~~~~Y~-~~g~~~lr~~ia~~~----g--~~~~~i~~t~G~~~ 157 (423)
.+..+.++|+|+.|.+ ++++++.+.+++.+. . ....|+ +.|..+||+++++++ | +++++|++|+|+++
T Consensus 25 ~~~~~~~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~ 104 (398)
T PRK08363 25 LEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTE 104 (398)
T ss_pred HHhcCCCeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHH
Confidence 3445678999999998 788899999888763 2 224684 568999999999997 3 67899999999999
Q ss_pred HHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEe-cCC-CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCC
Q 014492 158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKV-PRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII 235 (423)
Q Consensus 158 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v-~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~ 235 (423)
++.+++.+++++||.|+++.|+|..+...++..|++++.+ +.+ +++.+|++++++.+. .++++++++|||||||.++
T Consensus 105 al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~p~NPtG~~~ 183 (398)
T PRK08363 105 ALQLIFGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKIT-EKTKAIAVINPNNPTGALY 183 (398)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCC-cceEEEEEECCCCCCCcCc
Confidence 9999999999999999999999999999999999999988 443 456799999999986 6889999999999999999
Q ss_pred CHHHHHHHHcC----CCEEEEccCCccccCCCch--hhhhccCCcEEEEccChhhhcccCcccccccc--CHHHHHHHHH
Q 014492 236 NDEDLLKILEM----PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF--PLSIIEYLWR 307 (423)
Q Consensus 236 ~~~~l~~i~~~----~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~--~~~~~~~l~~ 307 (423)
+.+++++|++. |+++|+||+|.++.+.+.. ...+....++++++||||.|+++|+|+||+++ ++++++.+..
T Consensus 184 ~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~l~~ 263 (398)
T PRK08363 184 EKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDPEGKLAEVRE 263 (398)
T ss_pred CHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCcCCcEEEEecchhccCCccceEEEEEEeCcHHHHHHHHH
Confidence 98887777653 8999999999988764422 23333456899999999999999999999997 7776666543
Q ss_pred hc-----CCCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeec-CCCceEEEEEeCCC--CCHHH
Q 014492 308 AK-----QPYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPY-PSYSNFILCEVTSG--MDAKK 378 (423)
Q Consensus 308 ~~-----~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~~~~~~~~~~~~~--~~~~~ 378 (423)
.. ..++.+.++|.++..+|.+ .+|+++.+++++++++.+.+.|++++++.+. |.+++|+|+++++. .+..+
T Consensus 264 ~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~~~~~l~~~~~~~~~~ 343 (398)
T PRK08363 264 AIDKLARIRLCPNTPAQFAAIAGLTGPMDYLEEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPRIEEGPWKDDKE 343 (398)
T ss_pred HHHHHhcccccCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhcCCCCEecCCCeEEEEEEEeccCCCCCHHH
Confidence 32 2367899999999999975 6789999999999999999999988655554 56777888888752 35566
Q ss_pred HHHH-HHhCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014492 379 LKDD-LAKMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 379 l~~~-L~~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
++.. |.++||.++++..+. .++|+||+++.. .+++.+++++|
T Consensus 344 ~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~~--~~~l~~~l~~l 388 (398)
T PRK08363 344 FVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFLPP--VEILEEAMDRF 388 (398)
T ss_pred HHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCC--HHHHHHHHHHH
Confidence 6555 568999999987643 357999999754 36788888776
No 82
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=1.2e-43 Score=350.55 Aligned_cols=327 Identities=23% Similarity=0.334 Sum_probs=270.1
Q ss_pred CCCCeeEcCCCCCC----CCCCHHHHHHHhc-CC--CCCCC-CCcchHHHHHHHHHHhC------CCCCcEEEeCCHHHH
Q 014492 93 KPEDIVKIDANENP----YGPPPEVREALGQ-LK--FPYIY-PDPESRRLRAALAKDSG------LESDHILVGCGADEL 158 (423)
Q Consensus 93 ~~~~~i~l~~~~~~----~~~~~~v~~al~~-~~--~~~~Y-~~~g~~~lr~~ia~~~g------~~~~~i~~t~G~~~a 158 (423)
++.++++|+.+++. +++++++.+++.+ +. ....| +..|..++|++++++++ +++++|++|+|++++
T Consensus 29 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~a 108 (403)
T TIGR01265 29 PEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTSGCSQA 108 (403)
T ss_pred cCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecChHHH
Confidence 35788999999864 6788889888876 22 22468 55688999999999986 367899999999999
Q ss_pred HHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCC
Q 014492 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236 (423)
Q Consensus 159 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~ 236 (423)
+.+++++++++||+|+++.|+|..+...++..|++++.++.+ +++.+|++++++.+. .+++++++++||||||.+++
T Consensus 109 l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~i~~p~NPtG~~~~ 187 (403)
T TIGR01265 109 IEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALAD-EKTVAIVVINPSNPCGSVFS 187 (403)
T ss_pred HHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhC-cCccEEEEecCCCCCCCCCC
Confidence 999999999999999999999999999999999999998853 467899999999886 67999999999999999999
Q ss_pred HHHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhccCCcEEEEccChhhhcccCccccccccC--HH-----HH
Q 014492 237 DEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP--LS-----II 302 (423)
Q Consensus 237 ~~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~--~~-----~~ 302 (423)
.+++++|++. |+++|+||+|.+|.+++. ....+....++++++||||.|+++|+|+||++++ ++ ++
T Consensus 188 ~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~ 267 (403)
T TIGR01265 188 RDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFRDTVL 267 (403)
T ss_pred HHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCCCcceEEEEEEeCchhhhHHHHH
Confidence 8887777653 999999999999986542 2223334457999999999999999999999983 22 44
Q ss_pred HHHHHhcC-CCCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCe-ecCCCceEEEEEeCCC-----
Q 014492 303 EYLWRAKQ-PYNVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSG----- 373 (423)
Q Consensus 303 ~~l~~~~~-~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~~~~~~~~~~----- 373 (423)
+.+..... .++++.++|.++..+|++ ..++++.+++++++++.+.+.|+.++++. ..|++|+|+|++++++
T Consensus 268 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~~~~ 347 (403)
T TIGR01265 268 QGLKNLLQRILGPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGLVCPKPEGAMYLMVKLELELFPEI 347 (403)
T ss_pred HHHHHHhhhhcCCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCceeEEEEeccccccCCC
Confidence 44544443 367889999999999975 57889999999999999999999885555 4688999999999743
Q ss_pred CCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 374 MDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 374 ~~~~~l~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.+..++++.|. ++||.+.++..++.++++||+++..+ +.|.+++++|
T Consensus 348 ~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~~~~--~~l~~~l~~l 395 (403)
T TIGR01265 348 KDDVDFCEKLVREESVICLPGSAFGLPNWVRITITVPE--SMLEEACSRI 395 (403)
T ss_pred CCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEecCCH--HHHHHHHHHH
Confidence 26788988865 88999999987767899999999753 6799999886
No 83
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=100.00 E-value=2.4e-44 Score=355.41 Aligned_cols=320 Identities=21% Similarity=0.313 Sum_probs=257.0
Q ss_pred CCCeeEcCCCCCCCCCCHHHHHHHhcC-C------CCCCC-CCcchHHHHHHHHHHh---CCCCCcEEEeCCHHHHHHHH
Q 014492 94 PEDIVKIDANENPYGPPPEVREALGQL-K------FPYIY-PDPESRRLRAALAKDS---GLESDHILVGCGADELIDLI 162 (423)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~------~~~~Y-~~~g~~~lr~~ia~~~---g~~~~~i~~t~G~~~al~~~ 162 (423)
+.++++|+.|++++++++.+.+++.+. . ....| |+.|.++||+++++++ ++++++|++|+|+++++..+
T Consensus 32 ~~~~i~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~~~~~d~I~it~Ga~~al~~l 111 (402)
T TIGR03542 32 SADIIRLGIGDTTQPLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRGRIDPEEIFISDGAKCDVFRL 111 (402)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhcCCCHHHEEECCCcHHHHHHH
Confidence 467899999999999999888877652 1 12457 6678999999999986 78899999999999999987
Q ss_pred HHHhcCCCCeEEEcCCCchhhHHHHHHCCC-----------eEEEecCCC--CCCCCHHHHHHHhhcCCceEEEEcCCCC
Q 014492 163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGA-----------AVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNN 229 (423)
Q Consensus 163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~-----------~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~N 229 (423)
. .++.+||+|++++|+|..|...++..|+ +++.+|.+. ++..|++. ..++++|++|||||
T Consensus 112 ~-~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~------~~~~~~i~l~nP~N 184 (402)
T TIGR03542 112 Q-SLFGSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE------EPKIDIIYLCSPNN 184 (402)
T ss_pred H-HhcCCCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCccc------cCCceEEEEeCCCC
Confidence 5 4678999999999999999999999999 999998643 34444321 25789999999999
Q ss_pred CcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhcc-CCcEEEEccChhhhcccCccccccccCHHH
Q 014492 230 PDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSI 301 (423)
Q Consensus 230 PtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~-~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~ 301 (423)
|||.+++.+++++|++. +++||+||+|.+|.+++. .....+. .+++++++||||.||++|+|+||+++++++
T Consensus 185 PTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~~i~~~~l 264 (402)
T TIGR03542 185 PTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGWTVVPKEL 264 (402)
T ss_pred CCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCcceEEEEecHHH
Confidence 99999999998888764 899999999999886542 1222222 367899999999999999999999999887
Q ss_pred H--------HHHHH-hcCC-CCCcHHHHHHHHHHhCCh--HHHHHHHHHHHHHHHHHHHHHccCCCCeec-CCCceEEEE
Q 014492 302 I--------EYLWR-AKQP-YNVSVAAEVAACAALQNP--IYLEKVKEALIKERERLFKLLKDVPFLNPY-PSYSNFILC 368 (423)
Q Consensus 302 ~--------~~l~~-~~~~-~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~~~~~~~~ 368 (423)
+ +.+.+ .... .+++.++|.++..++.+. .+..+.++.++++++.+.+.|++.+ +.+. +.+++|+|+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~~~~~~~~f~~v 343 (402)
T TIGR03542 265 TYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAAG-FKVYGGEHAPYLWV 343 (402)
T ss_pred hhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhcC-ceecCCCceeEEEE
Confidence 6 22222 1222 368889999998988764 3466777889999999999998875 4444 468999999
Q ss_pred EeCCCCCHHHHHHHHH-hCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhhC
Q 014492 369 EVTSGMDAKKLKDDLA-KMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHLY 423 (423)
Q Consensus 369 ~~~~~~~~~~l~~~L~-~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l~ 423 (423)
++++..++.++++.|. ++||.+++++.++ .++|+||+++.. .+++.+++++|+
T Consensus 344 ~l~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~--~~~l~~~l~~l~ 399 (402)
T TIGR03542 344 KTPEGISSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAFGK--RENIVEACERIK 399 (402)
T ss_pred ECCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCC--HHHHHHHHHHHH
Confidence 9987778889999987 6799999987643 368999998663 377999998873
No 84
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=4.2e-44 Score=355.64 Aligned_cols=328 Identities=21% Similarity=0.276 Sum_probs=262.1
Q ss_pred CCCCeeEcCCCCCCCCCCHHHHHHHhcC-C-------------CCCCCCCc-chHHHHHHHHHHhC--------CCCCcE
Q 014492 93 KPEDIVKIDANENPYGPPPEVREALGQL-K-------------FPYIYPDP-ESRRLRAALAKDSG--------LESDHI 149 (423)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~-~-------------~~~~Y~~~-g~~~lr~~ia~~~g--------~~~~~i 149 (423)
.+..+|+|+..||.+- ..++.+.+.+. . ....|.+. |.++||+++|++++ +++++|
T Consensus 45 np~g~i~l~~aeN~l~-~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~~I 123 (447)
T PLN02607 45 NPSGVIQMGLAENQVS-FDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARFDPDRI 123 (447)
T ss_pred CCCceEEEechhhhhh-HHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHHHe
Confidence 3456899999999773 35555555441 0 11236444 78999999999873 688999
Q ss_pred EEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHH-HCCCeEEEecCC--CCCCCCHHHHHHHhhc-----CCceE
Q 014492 150 LVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA-VNGAAVVKVPRK--SDFSLNVELIADAVER-----EKPKC 221 (423)
Q Consensus 150 ~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~v~~~--~~~~~d~~~l~~~i~~-----~~~~~ 221 (423)
++|+|+++++.+++.++++|||.|+++.|+|+.|...++ ..|++++.|+.+ ++|.+|++++++++.+ .++|+
T Consensus 124 vit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~ 203 (447)
T PLN02607 124 VLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRG 203 (447)
T ss_pred EEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeE
Confidence 999999999999999999999999999999999988776 479999999964 4577999999998863 47899
Q ss_pred EEEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc----hhhhh------ccCCcEEEEccChhhhcc
Q 014492 222 IFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES----RMEWV------KKHDNLIVLRTFSKRAGL 287 (423)
Q Consensus 222 i~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~----~~~~~------~~~~~~i~i~S~SK~~g~ 287 (423)
|+++|||||||.+++.+++++|+++ ++++|+||+|.++.++.. ..... +..+++++++||||.||+
T Consensus 204 lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~ 283 (447)
T PLN02607 204 VLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGL 283 (447)
T ss_pred EEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCC
Confidence 9999999999999999999988775 999999999998765431 11111 114689999999999999
Q ss_pred cCcccccccc-CHHHHHHHHHhcCCCCCcHHHHHHHHHHhCChH----HHHHHHHHHHHHHHHHHHHHccCCCCeecCCC
Q 014492 288 AGLRVGYGAF-PLSIIEYLWRAKQPYNVSVAAEVAACAALQNPI----YLEKVKEALIKERERLFKLLKDVPFLNPYPSY 362 (423)
Q Consensus 288 ~G~R~G~i~~-~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~----~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~ 362 (423)
+|+|+||+++ ++++++.+........+|.++|.++..+|++++ ++++.+++++++++.+.+.|++.+.....+.+
T Consensus 284 ~GlRvG~ivs~n~~l~~~~~~~~~~~~~s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~gi~~~~~~a 363 (447)
T PLN02607 284 PGFRVGTIYSYNDKVVTTARRMSSFTLVSSQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRAGIECLKGNA 363 (447)
T ss_pred CcceEEEEEEcCHHHHHHHHHHhhcCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCe
Confidence 9999999998 677777777665555689999999999999854 45677888999999999999987533345678
Q ss_pred ceEEEEEeCCCC------CHHHHHHHHH-hCCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 363 SNFILCEVTSGM------DAKKLKDDLA-KMGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 363 ~~~~~~~~~~~~------~~~~l~~~L~-~~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
|+|+|+++++.. ...++++.|. ++||.+.||..+ ..++|+||+|+..++ +.|.+++++|
T Consensus 364 g~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~~~~-~~l~~gl~Ri 431 (447)
T PLN02607 364 GLFCWMNLSPLLETPTREGELALWDSILREVKLNISPGSSCHCSEPGWFRVCFANMSE-DTLEVALKRI 431 (447)
T ss_pred eEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEEeccCCH-HHHHHHHHHH
Confidence 999999997421 2346777776 579999998764 347999999997432 7799998887
No 85
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.9e-43 Score=346.78 Aligned_cols=325 Identities=25% Similarity=0.337 Sum_probs=268.2
Q ss_pred CCCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCC-cchHHHHHHHHHHh-----CCCCCcEEEeCCHHHHHHHHHHHh
Q 014492 94 PEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPD-PESRRLRAALAKDS-----GLESDHILVGCGADELIDLIMRCV 166 (423)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~-~g~~~lr~~ia~~~-----g~~~~~i~~t~G~~~al~~~~~~l 166 (423)
+.++++|+.|++++++++.+.+++.+. .....|++ .|.+++|+++++++ ++++++|++|+|+++++.+++..+
T Consensus 29 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l 108 (397)
T PRK07568 29 GIKVYHLNIGQPDIKTPEVFFEAIKNYDEEVLAYSHSQGIPELREAFAKYYKKWGIDVEPDEILITNGGSEAILFAMMAI 108 (397)
T ss_pred CCCEEEecCCCCCCCCCHHHHHHHHHHhcCCcCcCCCCCCHHHHHHHHHHHHHhCCCCCcceEEEcCChHHHHHHHHHHh
Confidence 356899999999999899999998763 23356754 57999999999997 478899999999999999999999
Q ss_pred cCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCC-CCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHH
Q 014492 167 LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFS-LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243 (423)
Q Consensus 167 ~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~-~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i 243 (423)
+++||+|++++|+|..+...++..|++++.++.+ +++. .|++++++.+. +++++|++++|+||||.+++.+++++|
T Consensus 109 ~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~-~~~~~v~i~~p~NPtG~~~~~~~~~~i 187 (397)
T PRK07568 109 CDPGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLIT-PKTKAILISNPGNPTGVVYTKEELEML 187 (397)
T ss_pred cCCCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcC-ccceEEEEECCCCCCCccCCHHHHHHH
Confidence 9999999999999999998889999999999974 3344 36899999886 689999999999999999999888887
Q ss_pred HcC----CCEEEEccCCccccCCCc---hhhhhc-cCCcEEEEccChhhhcccCccccccccC-HHHHHHHHHhcC-CCC
Q 014492 244 LEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQ-PYN 313 (423)
Q Consensus 244 ~~~----~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~-~~~~~~l~~~~~-~~~ 313 (423)
++. ++++|+||+|.+|.+.+. ....+. ..+++++++||||.||++|+|+||++++ +++++.+.+... .++
T Consensus 188 ~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~ 267 (397)
T PRK07568 188 AEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLISKNKELIAAAMKLCQARLS 267 (397)
T ss_pred HHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEEEecCCHHHHHHHHHHhhccCC
Confidence 764 999999999999876432 122222 2678999999999999999999999985 688887765544 378
Q ss_pred CcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCCCCCHHHHHHHHHh------
Q 014492 314 VSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTSGMDAKKLKDDLAK------ 385 (423)
Q Consensus 314 ~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~~~~~~~l~~~L~~------ 385 (423)
.+.+.|.++..++++ ++++++.++.++++++.+.+.|++++++.+ .|.+++|+|++++. .+..++.+.|.+
T Consensus 268 ~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~~~~~l~~-~~~~~~~~~l~~~~~~~~ 346 (397)
T PRK07568 268 PPTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEELNKIPGVVCEKPKGAFYIIAKLPV-DDAEDFAKWLLTDFNYNG 346 (397)
T ss_pred CCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCcceEEEEecCC-CCHHHHHHHHHhhccccc
Confidence 899999999999975 578899999999999999999998865553 46778899999974 367889888864
Q ss_pred CCcEEEeCCCC----C-CCCeEEEEecChhhHHHHHHHHhhh
Q 014492 386 MGVMIRHYNNK----E-LKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 386 ~gI~v~~~~~~----~-~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
+||.+.++..+ . .++++||+++..+ +++.+++++|
T Consensus 347 ~gv~v~pg~~f~~~~~~~~~~iRls~~~~~--~~~~~~~~~l 386 (397)
T PRK07568 347 ETVMVAPASGFYATPGLGKNEIRIAYVLNE--EDLKRAMEIL 386 (397)
T ss_pred ceEEEeCchHhcCCCCCCCCeEEEEEeCCH--HHHHHHHHHH
Confidence 69999987653 2 2479999998542 7788887766
No 86
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.1e-43 Score=345.54 Aligned_cols=328 Identities=26% Similarity=0.393 Sum_probs=272.9
Q ss_pred CCCCCeeEcCCCCCCCCCCHHHHHHHhcC--CCCCCCC-CcchHHHHHHHHHHh------CCCCCcEEEeCCHHHHHHHH
Q 014492 92 RKPEDIVKIDANENPYGPPPEVREALGQL--KFPYIYP-DPESRRLRAALAKDS------GLESDHILVGCGADELIDLI 162 (423)
Q Consensus 92 ~~~~~~i~l~~~~~~~~~~~~v~~al~~~--~~~~~Y~-~~g~~~lr~~ia~~~------g~~~~~i~~t~G~~~al~~~ 162 (423)
..+.++++|+.+++++++++++.+++.+. .....|+ ..|..+||+++++++ ++++++|++|+|+++++..+
T Consensus 28 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~ 107 (393)
T PRK05764 28 AQGRDVISLGAGEPDFDTPEHIKEAAIEALDDGKTKYTPAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNA 107 (393)
T ss_pred hccCCEEEeCCCCCCCCCCHHHHHHHHHHHhcCCCCcCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHH
Confidence 33467899999999999889998888762 2234584 457899999999997 46788999999999999999
Q ss_pred HHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHH
Q 014492 163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL 240 (423)
Q Consensus 163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l 240 (423)
+.+++++||.|++++|+|..+...++.+|++++.++.+ .++.+|++++++.+. ++++++++++|+||||.+++.+++
T Consensus 108 ~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~p~NPtG~~~~~~~~ 186 (393)
T PRK05764 108 FMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAIT-PKTKALILNSPSNPTGAVYSPEEL 186 (393)
T ss_pred HHHhcCCCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHHHHHHhhC-ccceEEEEECCCCCCCcccCHHHH
Confidence 99999999999999999999999999999999999975 357899999999986 689999999999999999998888
Q ss_pred HHHHcC----CCEEEEccCCccccCCCc---hhhhh--ccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC
Q 014492 241 LKILEM----PILVVLDEAYTEFSGLES---RMEWV--KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP 311 (423)
Q Consensus 241 ~~i~~~----~~~li~Deay~~~~~~~~---~~~~~--~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~ 311 (423)
++|++. ++++|+||+|.++.+++. ....+ +..+++++++||||.+|++|+|+||+++++++++.+......
T Consensus 187 ~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i~~~~~~~~~~~~~~~~ 266 (393)
T PRK05764 187 EAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGYAAGPKELIKAMSKLQSH 266 (393)
T ss_pred HHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeEEEecCHHHHHHHHHHHhh
Confidence 877664 999999999998876432 22222 235789999999999999999999999999999998877653
Q ss_pred --CCCcHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCCCC-----CHHHHHHH
Q 014492 312 --YNVSVAAEVAACAALQ-NPIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTSGM-----DAKKLKDD 382 (423)
Q Consensus 312 --~~~~~~~~~a~~~~l~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~~~-----~~~~l~~~ 382 (423)
++++.++|.++..+|+ ..+++++.+++++++++.+.+.|++++++.+ .|.+++|+|++++.+. ++.++.+.
T Consensus 267 ~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (393)
T PRK05764 267 STSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDGLNEIPGLECPKPEGAFYVFPNVSKLLGKSITDSLEFAEA 346 (393)
T ss_pred cccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCCcceEEEEecccccccccCCHHHHHHH
Confidence 5788999999999997 4678888999999999999999998844553 4666789999987543 35788888
Q ss_pred HH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 383 LA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 383 L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
|. ++||.++++..+..++++||+++.. .+++.+++++|
T Consensus 347 l~~~~gi~v~~g~~f~~~~~vRis~~~~--~~~~~~~i~~l 385 (393)
T PRK05764 347 LLEEAGVAVVPGIAFGAPGYVRLSYATS--LEDLEEGLERI 385 (393)
T ss_pred HHHhCCEEEccccccCCCCEEEEEecCC--HHHHHHHHHHH
Confidence 76 6899999987765689999999864 36777777765
No 87
>PRK08354 putative aminotransferase; Provisional
Probab=100.00 E-value=5.3e-43 Score=334.08 Aligned_cols=298 Identities=29% Similarity=0.430 Sum_probs=244.4
Q ss_pred CCCCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCC
Q 014492 93 KPEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD 171 (423)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd 171 (423)
...++|+|+.|+|+++ ++.+.+++.+. ....+||. ...+|+++++++| ++|++|+|+++++.+++. ++.+||
T Consensus 6 ~~~~~i~l~~~~np~~-p~~~~~a~~~~~~~~~~yp~--~~~l~~~ia~~~~---~~I~vt~G~~~al~~~~~-~~~~gd 78 (311)
T PRK08354 6 REEGLIDFSASVNPYP-PEWLDEMFERAKEISGRYTY--YEWLEEEFSKLFG---EPIVITAGITEALYLIGI-LALRDR 78 (311)
T ss_pred CccceeEecCCCCCCC-CHHHHHHHHHHHHHhhcCCC--hHHHHHHHHHHHC---CCEEECCCHHHHHHHHHH-hhCCCC
Confidence 3467899999999996 57888888763 22356775 5789999999998 479999999999998886 445899
Q ss_pred eEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC----C
Q 014492 172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----P 247 (423)
Q Consensus 172 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~ 247 (423)
.|+++.|+|..|...++..|++++.++ +|++.+++.++ +++++++||||||||.+++.+++++|++. |
T Consensus 79 ~vlv~~P~y~~~~~~~~~~g~~~~~~~------~d~~~l~~~~~--~~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~ 150 (311)
T PRK08354 79 KVIIPRHTYGEYERVARFFAARIIKGP------NDPEKLEELVE--RNSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRN 150 (311)
T ss_pred eEEEeCCCcHHHHHHHHHcCCEEeecC------CCHHHHHHhhc--CCCEEEEecCCCCCCCccCHHHHHHHHHHhhhcC
Confidence 999999999999999999999998764 57889988875 56789999999999999999999999874 8
Q ss_pred CEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCcHHHHHHHHHHhC
Q 014492 248 ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQ 327 (423)
Q Consensus 248 ~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~ 327 (423)
+++|+||+|.+|.+++.. . ..+++++++||||.||++|+|+||+++ ..+.+.+...++..+..++.++..+++
T Consensus 151 ~~li~De~y~~f~~~~~~---~-~~~~vi~~~S~SK~~~l~GlRiG~~v~---~~~~l~~~~~~~~~~~~~~~~~~~~~~ 223 (311)
T PRK08354 151 ALLILDEAFIDFVKKPES---P-EGENIIKLRTFTKSYGLPGIRVGYVKG---FEEAFRSVRMPWSIGSTGYAFLEFLIE 223 (311)
T ss_pred cEEEEeCcchhccccccc---c-CCCcEEEEeccHhhcCCccceeeeeee---hHHHHHHcCCCccCCHHHHHHHHHHHH
Confidence 999999999999875421 1 367899999999999999999999998 566777777778888888888887777
Q ss_pred Ch-HHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEe
Q 014492 328 NP-IYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSV 406 (423)
Q Consensus 328 ~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~ 406 (423)
+. +++.+.++.+++.++++.+.+. .++.++|++++++ ++.++++.|.++||.++++..++.++|+||++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~l~~~l~-------~~~~~~~~~~~~~---~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~ 293 (311)
T PRK08354 224 DDFEHLRKTMPLIWREKERFEKALY-------VKSDANFFIKDVG---DAEKFVEFLKRNGILVRDCTSFGLPGYIRFSV 293 (311)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcC-------CCCCCcEEEEECC---CHHHHHHHHHHCCeEEEecccCCCCCeEEEEe
Confidence 53 4455555556666655544441 2566777777764 57889999999999999998776679999999
Q ss_pred cChhhHHHHHHHHhhh
Q 014492 407 GKPEHTDALMECLMHL 422 (423)
Q Consensus 407 ~~~~~~~~l~~al~~l 422 (423)
+.++++++|.++++.+
T Consensus 294 ~~~~~~~~l~~al~~~ 309 (311)
T PRK08354 294 RDREENEKLIRALREW 309 (311)
T ss_pred CCHHHHHHHHHHHHHh
Confidence 9988889999999876
No 88
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=7.9e-43 Score=343.94 Aligned_cols=327 Identities=23% Similarity=0.307 Sum_probs=266.0
Q ss_pred CCCCeeEcCCCCCCCCCCHHHHHHHhc-C--CCCCCCCCc-chHHHHHHHHHHh----C--CCCC-cEEEeCCHHHHHHH
Q 014492 93 KPEDIVKIDANENPYGPPPEVREALGQ-L--KFPYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCGADELIDL 161 (423)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~--~~~~~Y~~~-g~~~lr~~ia~~~----g--~~~~-~i~~t~G~~~al~~ 161 (423)
.+.++++|+.+.++..+++.+.+++.+ . .....|+++ |.++||+++++++ | ++++ +|++|+|+++++..
T Consensus 27 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l~~ 106 (395)
T PRK08175 27 RGEDIIDFSMGNPDGPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGLAH 106 (395)
T ss_pred cCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHH
Confidence 346789999998887777767766654 2 223678654 7899999999986 4 4566 89999999999999
Q ss_pred HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc--CCceEEEEcCCCCCcCcCCCHHH
Q 014492 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER--EKPKCIFLTSPNNPDGSIINDED 239 (423)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~~~~~~ 239 (423)
++..+++|||+|++++|+|+.+...++..|++++.++.+++ +.+++++++.++. .++++|++++||||||.+++.++
T Consensus 107 ~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~ 185 (395)
T PRK08175 107 LMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEG-VDFFNELERAIRESYPKPKMMILGFPSNPTAQCVELEF 185 (395)
T ss_pred HHHHhCCCCCEEEEcCCCCcchHHHHHHcCCeEEEEecccC-CCcHHHHHHHHhhccCCceEEEEeCCCCCCCCCCCHHH
Confidence 99999999999999999999998888899999999997644 3458888887763 47899999999999999999988
Q ss_pred HHHHHcC----CCEEEEccCCccccCCCch---hhhhc-cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC-
Q 014492 240 LLKILEM----PILVVLDEAYTEFSGLESR---MEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ- 310 (423)
Q Consensus 240 l~~i~~~----~~~li~Deay~~~~~~~~~---~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~- 310 (423)
+++|++. |+++|+||+|.++.+++.. ...+. ..+++++++||||.||++|+|+||+++++++++++.+...
T Consensus 186 ~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~~~l~~~~~~~~~~ 265 (395)
T PRK08175 186 FEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGNPELVSALARIKSY 265 (395)
T ss_pred HHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeCCHHHHHHHHHHHhh
Confidence 8887764 9999999999988764321 11122 2467889999999999999999999999999999887664
Q ss_pred -CCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCC---CHHHHHHHHH-
Q 014492 311 -PYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGM---DAKKLKDDLA- 384 (423)
Q Consensus 311 -~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~---~~~~l~~~L~- 384 (423)
.++.+.+.|.++..++.+ ..+++++++.++++++.+.+.|+++++....|.+|+|+|+++++.. ++.++++.|.
T Consensus 266 ~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~p~~g~~i~i~l~~~~~~~~~~~~~~~l~~ 345 (395)
T PRK08175 266 HDYGTFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEAGWMVEMPKASMYVWAKIPEPYAAMGSLEFAKKLLN 345 (395)
T ss_pred cccCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCEEEEEEEECCcccCCCCHHHHHHHHHH
Confidence 456778888888888875 5678899999999999999999988643345778999999998643 4788988776
Q ss_pred hCCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 385 KMGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 385 ~~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
++||.|.++..+ ..++++||+++. +.+.+.+++++|
T Consensus 346 ~~gv~v~p~~~f~~~~~~~lRis~~~--~~~~~~~al~~l 383 (395)
T PRK08175 346 EAKVCVSPGIGFGDYGDTHVRFALIE--NRDRIRQAIRGI 383 (395)
T ss_pred hCCEEEeCchhhCcCCCCeEEEEeCC--CHHHHHHHHHHH
Confidence 789999998653 335799999984 348899998876
No 89
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-42 Score=341.20 Aligned_cols=324 Identities=27% Similarity=0.433 Sum_probs=268.1
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCCc-chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCC
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQL-K--FPYIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPG 170 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~Y~~~-g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~g 170 (423)
.++|+|+.+++++++++.+.+++.+. . ....|+++ |.+++|+++++++|+++++|++|+|+++++..+++.++.+|
T Consensus 28 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~v~~~~g~t~al~~~~~~~~~~g 107 (380)
T PRK06225 28 KEMIWMGQNTNHLGPHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDLGLDDDEALITAGATESLYLVMRAFLSPG 107 (380)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHhcCCCCCcEEEeCCHHHHHHHHHHHhcCCC
Confidence 56899999999999999999998763 2 12457655 78999999999999999999999999999999999999999
Q ss_pred CeEEEcCCCchhhHHHHHHCCCeEEEecCC---CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-
Q 014492 171 DKIVDCPPTFTMYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM- 246 (423)
Q Consensus 171 d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~---~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~- 246 (423)
|.|++++|+|..+...++..|++++.++.+ +++.+|++.+++.+. .+++++++++|+||||.+++.+++++|++.
T Consensus 108 d~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~p~NptG~~~~~~~~~~i~~~a 186 (380)
T PRK06225 108 DNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMD-ENTRLIYLIDPLNPLGSSYTEEEIKEFAEIA 186 (380)
T ss_pred CEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcC-CCceEEEEeCCCCCCCcCCCHHHHHHHHHHH
Confidence 999999999999988889999999999853 256899999999987 689999999999999999998888888764
Q ss_pred ---CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC-CCCCcHHHHHHH
Q 014492 247 ---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ-PYNVSVAAEVAA 322 (423)
Q Consensus 247 ---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~-~~~~~~~~~~a~ 322 (423)
|+++|+||+|.+|..+....... ..++++++.||||.+|++|+|+||+++++++++.+..... .++.+.++|.++
T Consensus 187 ~~~~~~ii~De~y~~~~~~~~~~~~~-~~~~~i~~~s~SK~~g~~G~RiG~i~~~~~l~~~~~~~~~~~~~~~~~~~~~a 265 (380)
T PRK06225 187 RDNDAFLLHDCTYRDFAREHTLAAEY-APEHTVTSYSFSKIFGMAGLRIGAVVATPDLIEVVKSIVINDLGTNVIAQEAA 265 (380)
T ss_pred HHCCcEEEEehhHHHHhccCCchhhc-CCCCEEEEeechhhcCCccceeEEEecCHHHHHHHHHHHhcccCCCHHHHHHH
Confidence 99999999998876433222222 3478999999999999999999999999999998877643 577888999988
Q ss_pred HHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCC--eecCCCceEEEEEeCC-CCCHHHHHHHHHhCCcEEEeCCCC--
Q 014492 323 CAALQN-PIYLEKVKEALIKERERLFKLLKDVPFL--NPYPSYSNFILCEVTS-GMDAKKLKDDLAKMGVMIRHYNNK-- 396 (423)
Q Consensus 323 ~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~--~~~p~~~~~~~~~~~~-~~~~~~l~~~L~~~gI~v~~~~~~-- 396 (423)
..++.. .+|.++.++.++++++.+.+.|++++.. ...|.+++|+|++++. +.+..++.+.|.++||.++++..+
T Consensus 266 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~ 345 (380)
T PRK06225 266 IAGLKVKDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDISEAGIDPEDLVEYLLERKIFVRQGTYTSK 345 (380)
T ss_pred HHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEEEEcccccCCHHHHHHHHHHCCEEEcCCcccCc
Confidence 888865 5677888888888888899999886443 2457889999999964 568899999999999999987542
Q ss_pred -CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 397 -ELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 397 -~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.+++++|++++..+ +++.+++++|
T Consensus 346 ~~~~~~iR~s~~~~~--e~l~~~~~~l 370 (380)
T PRK06225 346 RFGDRYIRVSFSIPR--EQVEVFCEEF 370 (380)
T ss_pred CCCCceEEEEeCCCH--HHHHHHHHHH
Confidence 23579999998642 4455444443
No 90
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=7.6e-43 Score=347.45 Aligned_cols=325 Identities=26% Similarity=0.395 Sum_probs=273.9
Q ss_pred CCeeEcCCCCCCCC--CCHHHHHHHhcC----CC--CCCCCC-cchHHHHHHHHHHh----C--CCCCcEEEeCCHHHHH
Q 014492 95 EDIVKIDANENPYG--PPPEVREALGQL----KF--PYIYPD-PESRRLRAALAKDS----G--LESDHILVGCGADELI 159 (423)
Q Consensus 95 ~~~i~l~~~~~~~~--~~~~v~~al~~~----~~--~~~Y~~-~g~~~lr~~ia~~~----g--~~~~~i~~t~G~~~al 159 (423)
.+.++|+.+.++.. +.....+++.+. .. ...|.. .|..+||+++++++ | +++++|++|+|+++++
T Consensus 89 ~~~i~f~~g~p~~~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al 168 (459)
T COG1167 89 PSVIDFAGGLPDPSLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQAL 168 (459)
T ss_pred CceecCCCCCCCcccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHH
Confidence 56789988765443 223444444331 11 245644 68999999999987 3 4678999999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEc-CCCCCcCcCCCHH
Q 014492 160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNNPDGSIINDE 238 (423)
Q Consensus 160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~-~p~NPtG~~~~~~ 238 (423)
+++.+.+++|||+|++++|+|......++..|++++.||.|+ .++|+|+|++.+.+.++|++|++ +.|||||.++|.+
T Consensus 169 ~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d~-~G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~tms~~ 247 (459)
T COG1167 169 DLLLRLLLDPGDTVLVEDPTYPGALQALEALGARVIPVPVDE-DGIDPEALEEALAQWKPKAVYVTPTFQNPTGVTMSLE 247 (459)
T ss_pred HHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCcEEecCCCC-CCCCHHHHHHHHhhcCCcEEEECCCCCCCCCCccCHH
Confidence 999999999999999999999999999999999999999974 59999999999987789999998 8899999999999
Q ss_pred HHHHHHcC----CCEEEEccCCccccCCCch---hhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC
Q 014492 239 DLLKILEM----PILVVLDEAYTEFSGLESR---MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP 311 (423)
Q Consensus 239 ~l~~i~~~----~~~li~Deay~~~~~~~~~---~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~ 311 (423)
+.++|++. +++||+||.|++|.+++.. ....+..+++++++||||.+. ||+|+||+++|+++++++...+..
T Consensus 248 rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~l~-PglRlG~vv~p~~~~~~~~~~k~~ 326 (459)
T COG1167 248 RRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKTLA-PGLRLGYVVAPPELIEKLLRLKQA 326 (459)
T ss_pred HHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhhcc-cccceeeeeCCHHHHHHHHHHHHH
Confidence 99988875 9999999999999976543 355666899999999999986 999999999999999999877654
Q ss_pred --CCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCC--CCe-ecCCCceEEEEEeCCCCCHHHHHHHH
Q 014492 312 --YNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVP--FLN-PYPSYSNFILCEVTSGMDAKKLKDDL 383 (423)
Q Consensus 312 --~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~--~~~-~~p~~~~~~~~~~~~~~~~~~l~~~L 383 (423)
...+.+.|.++...+.+ ..+++++++.++++++.+.+.|++.. ... ..|.+|+|+|+++|++.++.++.+.+
T Consensus 327 ~~~~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l~~~~~~~~l~~~a 406 (459)
T COG1167 327 ADLGPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLELPEGIDARELLAAA 406 (459)
T ss_pred hcCCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEEcCCCCCHHHHHHHH
Confidence 67889999988888886 36788999999999999999998864 233 36888999999999999999999999
Q ss_pred HhCCcEEEe-CCCCC----CCCeEEEEecChhhHHHHHHHHhhh
Q 014492 384 AKMGVMIRH-YNNKE----LKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 384 ~~~gI~v~~-~~~~~----~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.++||.+.+ +..+. ..+++||+++...+ +++.+++++|
T Consensus 407 ~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~~~~-e~i~~gi~~l 449 (459)
T COG1167 407 LEKGVVVTPLGSAFSADGDPRNGLRLSFSSPSE-EEIEEGIKRL 449 (459)
T ss_pred HHCCCEEEcCCccccCCCCCCCeEEEEcCCCCH-HHHHHHHHHH
Confidence 999999998 54422 35599999998764 8888888875
No 91
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=100.00 E-value=1.2e-43 Score=346.35 Aligned_cols=325 Identities=31% Similarity=0.525 Sum_probs=274.0
Q ss_pred CeeEcCCCCCCCC----CCHHHHHHHhc----CCCCCCCCCc-chHHHHHHHHHHhC------CCCC-cEEEeCCHHHHH
Q 014492 96 DIVKIDANENPYG----PPPEVREALGQ----LKFPYIYPDP-ESRRLRAALAKDSG------LESD-HILVGCGADELI 159 (423)
Q Consensus 96 ~~i~l~~~~~~~~----~~~~v~~al~~----~~~~~~Y~~~-g~~~lr~~ia~~~g------~~~~-~i~~t~G~~~al 159 (423)
++|+|+.|+++.. +++++.+++.+ ......|+++ |.++||++++++++ ++++ +|++++|+.+++
T Consensus 2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~ 81 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAAL 81 (363)
T ss_dssp TEEESSSSSTSSTTSSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHH
T ss_pred CEEEEECCCCCCcccccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccccch
Confidence 5799999999887 55566665543 2334678665 69999999999997 7788 999999999999
Q ss_pred HHHHHHh-cCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC--CCCCCCCHHHHHHHhhcC-----CceEEEEcCCCCCc
Q 014492 160 DLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVERE-----KPKCIFLTSPNNPD 231 (423)
Q Consensus 160 ~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPt 231 (423)
..++..+ .++||+|+++.|+|+.|...++..|++++.+|. +.++.+|++++++.+++. +++++++++|||||
T Consensus 82 ~~~~~~~~~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPt 161 (363)
T PF00155_consen 82 FLLLRLLKINPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPT 161 (363)
T ss_dssp HHHHHHHHSSTTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTT
T ss_pred hhhhhcccccccccceecCCccccccccccccCceeeeccccccccccccccccccccccccccccccceeeeccccccc
Confidence 9999988 789999999999999999999999999999994 467899999999999742 57899999999999
Q ss_pred CcCCCHHHHHHHHcC----CCEEEEccCCccccCCCch----hhhhccCCcEEEEccChhhhcccCccccccccCHHHHH
Q 014492 232 GSIINDEDLLKILEM----PILVVLDEAYTEFSGLESR----MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 303 (423)
Q Consensus 232 G~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~----~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~ 303 (423)
|.+++.+++++|++. +++||+||+|.++.++... ...+....++++++|+||.||++|+|+||+++++++++
T Consensus 162 G~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~~~~~~~ 241 (363)
T PF00155_consen 162 GSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVAPPELIE 241 (363)
T ss_dssp TBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEEEHHHHH
T ss_pred ccccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeeccccccccccccccccchhhhhh
Confidence 999999999999553 9999999999999876432 34455666799999999999999999999999999999
Q ss_pred HHHHhcCCCCCcHHHHHHHHHHhCChH----HHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHH
Q 014492 304 YLWRAKQPYNVSVAAEVAACAALQNPI----YLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKL 379 (423)
Q Consensus 304 ~l~~~~~~~~~~~~~~~a~~~~l~~~~----~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l 379 (423)
.+.+....+..+.+.+.++..++.+.. ++++.+++++++++++.+.|++.++....+.+++|+|+.++.. ++.++
T Consensus 242 ~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~-~~~~l 320 (363)
T PF00155_consen 242 RLRRFQRSGLSSSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEIGITVLPPEAGFFLWVRLDPN-DAEEL 320 (363)
T ss_dssp HHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSEEEHHSBSSEEEEEESHH-HHHHH
T ss_pred hhhhccccccccchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhhhheeeccCccEEEEEcccc-hHHHH
Confidence 999888877779999999998888754 8899999999999999999998864444566889999988633 67899
Q ss_pred HHHHHhC-CcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 380 KDDLAKM-GVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 380 ~~~L~~~-gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.++|.++ ||.+.++..+..++++||+++..+ .+++++++++|
T Consensus 321 ~~~L~~~~gi~v~pg~~~~~~~~iRi~~a~~~-~e~~~~~~~~l 363 (363)
T PF00155_consen 321 AQELLEEYGILVRPGSYFGVPGYIRISLASHS-EEDLEEALERL 363 (363)
T ss_dssp HHHHHHHHTEEEEEGGGGTSTTEEEEEGGCSC-HHHHHHHHHHH
T ss_pred HHHHHHhCCEEEEecCCCCCCCEEEEEeccCC-HHHHHHHHhhC
Confidence 9999976 999999888666999999993332 36788877765
No 92
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=4e-42 Score=338.23 Aligned_cols=325 Identities=25% Similarity=0.389 Sum_probs=265.8
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhc-CC-CCCCCCC-cchHHHHHHHHHH----hCC--CCC-cEEEeCCHHHHHHHHHH
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPD-PESRRLRAALAKD----SGL--ESD-HILVGCGADELIDLIMR 164 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~Y~~-~g~~~lr~~ia~~----~g~--~~~-~i~~t~G~~~al~~~~~ 164 (423)
.++++|+.+.++.+.++.+.+++.+ +. ....|++ .|..++|++++++ +|+ +++ +|++|+|+++++..++.
T Consensus 24 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~ 103 (387)
T PRK07777 24 TGAVNLGQGFPDEDGPPEMLEAAQEAIAGGVNQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAAVL 103 (387)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHH
Confidence 3679999999888777777777665 22 2256865 5789999999987 354 354 79999999999999999
Q ss_pred HhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC---CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHH
Q 014492 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS---DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL 241 (423)
Q Consensus 165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~---~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~ 241 (423)
+++++||+|+++.|+|..+...++..|.+++.++.++ ++.+|++++++.+. .++++|++++||||||.+++.++++
T Consensus 104 ~~~~~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~p~NPtG~~~~~~~~~ 182 (387)
T PRK07777 104 GLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVT-PRTRALIVNSPHNPTGTVLTAAELA 182 (387)
T ss_pred HhcCCCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcC-cccEEEEEcCCCCCCCccCCHHHHH
Confidence 9999999999999999999999999999999998643 46799999999986 6899999999999999999988888
Q ss_pred HHHcC----CCEEEEccCCccccCCCc---hhhhhc-cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC--C
Q 014492 242 KILEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--P 311 (423)
Q Consensus 242 ~i~~~----~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~--~ 311 (423)
+|++. ++++|+||+|.++.+.+. ...... ..+++++++||||.||++|+|+||+++++++++.+..... .
T Consensus 183 ~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~l~~~~~~~~~~~~ 262 (387)
T PRK07777 183 AIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGPAPLIAAVRAAKQYLT 262 (387)
T ss_pred HHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEecCHHHHHHHHHHHhhcc
Confidence 77664 999999999998876432 122222 2568999999999999999999999999999998887664 4
Q ss_pred CCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCC--CCCHHHHHHHHH-hCC
Q 014492 312 YNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS--GMDAKKLKDDLA-KMG 387 (423)
Q Consensus 312 ~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~--~~~~~~l~~~L~-~~g 387 (423)
+..+.+.|.++..++.. ..|+++.++.++++++.+.+.|++.++....|.+++|+|++++. ..++.++++.|. ++|
T Consensus 263 ~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~g 342 (387)
T PRK07777 263 YVGGAPFQPAVAHALDHEDAWVAALRDSLQAKRDRLAAGLAEAGFEVHDSAGTYFLCADPRPLGYDDGTEFCRALPERVG 342 (387)
T ss_pred cCCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhCCCCccCCCcceEEEecccccCCCCHHHHHHHHHHhCC
Confidence 56778888888888865 57888999999999999999999875333346678899998752 347889999997 689
Q ss_pred cEEEeCCCC-----CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 388 VMIRHYNNK-----ELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 388 I~v~~~~~~-----~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
|.|.++..+ ..++++||+++.. .+++.+++++|
T Consensus 343 v~v~pg~~f~~~~~~~~~~~Ri~~~~~--~~~l~~~l~~l 380 (387)
T PRK07777 343 VAAIPMSVFYDPADAWNHLVRFAFCKR--DDTLDEAIRRL 380 (387)
T ss_pred EEEeCchHhCCCCcCCCCeEEEEecCC--HHHHHHHHHHH
Confidence 999998642 2357999999874 47899999887
No 93
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.4e-42 Score=313.82 Aligned_cols=326 Identities=21% Similarity=0.301 Sum_probs=278.5
Q ss_pred CCeeEcCCCCCC----CCCCHHHHHHHhcC-C--CCCCC-CCcchHHHHHHHHHHh------CCCCCcEEEeCCHHHHHH
Q 014492 95 EDIVKIDANENP----YGPPPEVREALGQL-K--FPYIY-PDPESRRLRAALAKDS------GLESDHILVGCGADELID 160 (423)
Q Consensus 95 ~~~i~l~~~~~~----~~~~~~v~~al~~~-~--~~~~Y-~~~g~~~lr~~ia~~~------g~~~~~i~~t~G~~~al~ 160 (423)
+++|.++.|++. +++.++..+|+.+. . ..++| |..|....|+++|+++ .+++++|++|+|..+|++
T Consensus 61 k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe 140 (447)
T KOG0259|consen 61 KPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIE 140 (447)
T ss_pred ceeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHH
Confidence 478999998765 45677877887762 2 23678 7779999999999995 357899999999999999
Q ss_pred HHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEec--CCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHH
Q 014492 161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE 238 (423)
Q Consensus 161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~--~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~ 238 (423)
+++.+|.+||..|+++.|+|+.|...++..|.++..+. .+.+|.+|++.++..++ ++|.+++++||+||+|.+++.+
T Consensus 141 ~~i~~LA~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~D-ENT~AivviNP~NPcGnVys~~ 219 (447)
T KOG0259|consen 141 LAISSLANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALAD-ENTVAIVVINPNNPCGNVYSED 219 (447)
T ss_pred HHHHHhcCCCCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhc-cCeeEEEEeCCCCCCcccccHH
Confidence 99999999999999999999999999999999999999 35789999999999998 7999999999999999999999
Q ss_pred HHHHHHcC----CCEEEEccCCccccCCCchhh---hhccCCcEEEEccChhhhcccCccccccccC--------HHHHH
Q 014492 239 DLLKILEM----PILVVLDEAYTEFSGLESRME---WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP--------LSIIE 303 (423)
Q Consensus 239 ~l~~i~~~----~~~li~Deay~~~~~~~~~~~---~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~--------~~~~~ 303 (423)
.|++|++. +++||.||+|.++.+++.+.. .+...--+++++|+||.|-.||||+||++.. ..+++
T Consensus 220 HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRlGWi~~hD~~gvf~~~~~~q 299 (447)
T KOG0259|consen 220 HLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLGWIALHDPRGVFRDTKVVQ 299 (447)
T ss_pred HHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeecccccccccCCceeeeEEEecccccccchHHHH
Confidence 99999875 999999999999998764432 2333456899999999999999999999872 33445
Q ss_pred HHHHhcCC-CCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCe--ecCCCceEEEEEeC-----CC
Q 014492 304 YLWRAKQP-YNVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLN--PYPSYSNFILCEVT-----SG 373 (423)
Q Consensus 304 ~l~~~~~~-~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~--~~p~~~~~~~~~~~-----~~ 373 (423)
.+....+- .+++.+.|.|+-..|+. +++++.....++.+.+...+.|++++.+. +.|++.+|+|+++. +-
T Consensus 300 ~~~~~~~~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPeg~mylmv~l~~s~~~~~ 379 (447)
T KOG0259|consen 300 GIKNFLDIIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPEGCMYLMVKLNLSLFPDI 379 (447)
T ss_pred HHHHHHhccCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCCcceEEEeccchhhhccc
Confidence 55554433 56788999999999986 68899999999999999999999999876 47899999998774 34
Q ss_pred CCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhhC
Q 014492 374 MDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHLY 423 (423)
Q Consensus 374 ~~~~~l~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l~ 423 (423)
.|..+|++.|. |+.+.+-||..++.++|+||+++.+. +.+++|++||+
T Consensus 380 ~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~i~~~~--~~leea~~Rik 428 (447)
T KOG0259|consen 380 EDDVDFCQKLAREESVICLPGQAFGLKNWLRIVITVEE--EMLEEAFSRIK 428 (447)
T ss_pred cccHHHHHHHhhhcceEEeccccccCCCeEEEEEccCh--HHHHHHHHHHH
Confidence 57788999997 88999999999999999999999876 56889988874
No 94
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=9.7e-43 Score=346.88 Aligned_cols=322 Identities=21% Similarity=0.272 Sum_probs=249.3
Q ss_pred CeeEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCc-chHHHHHHHHHHh------C-C-C--CCcEEEeCCHHHHHHHHHH
Q 014492 96 DIVKIDANENPYGPPPEVREALGQLKFPYIYPDP-ESRRLRAALAKDS------G-L-E--SDHILVGCGADELIDLIMR 164 (423)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y~~~-g~~~lr~~ia~~~------g-~-~--~~~i~~t~G~~~al~~~~~ 164 (423)
++|+|+.+++++++++.+.++...+. +..||.+ |..++|+++++++ + . . .++|++|+|+++++..++.
T Consensus 101 ~~i~l~~g~p~~~~~~~v~e~~~~~~-~~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~ 179 (527)
T PRK09275 101 DAVSYVRDQLGFDADEFVYELVDGII-GDNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFD 179 (527)
T ss_pred HHHhhcCCCCCCCCCHHHHHHHHHHh-cCCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHH
Confidence 57999999999999888888665553 2458655 8899999999843 1 1 2 2489999999999999988
Q ss_pred H-----hcCCCCeEEEcCCCchhhHHHHHHCC--CeEEEecC--CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCC
Q 014492 165 C-----VLDPGDKIVDCPPTFTMYEFDAAVNG--AAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII 235 (423)
Q Consensus 165 ~-----l~~~gd~Vl~~~p~y~~~~~~~~~~g--~~~~~v~~--~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~ 235 (423)
+ +++|||+|++++|+|+.|...++..| ++++.++. +++|.+|++++++++. +++|+|+++|||||||.++
T Consensus 180 aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~-~~tkai~l~nP~NPTG~v~ 258 (527)
T PRK09275 180 SLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRD-PSIKALFLVNPSNPPSVAM 258 (527)
T ss_pred HHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcC-CCCCEEEEeCCcCCcCCCC
Confidence 6 68999999999999999999888764 55666664 3468999999999886 7899999999999999999
Q ss_pred CHHHHHHHHcC------CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHH-----HHHH
Q 014492 236 NDEDLLKILEM------PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-----IIEY 304 (423)
Q Consensus 236 ~~~~l~~i~~~------~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~-----~~~~ 304 (423)
+.+++++|++. +++||+||+|.+|.+........ ..+++|+++||||.||++|||+||++++++ +++.
T Consensus 259 s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~s~~~~-~~~~~I~v~SfSK~f~mtG~RlG~i~~~~~~v~~~~i~~ 337 (527)
T PRK09275 259 SDESLEKIADIVNEKRPDLMIITDDVYGTFVDDFRSLFAV-LPYNTILVYSFSKYFGATGWRLGVIALHEDNVFDKLIAK 337 (527)
T ss_pred CHHHHHHHHHHHHhcCCCcEEEECCCChhhcccccCHHHh-CCCCEEEEeehhhhccCcHhHHhhhhcCchhHHHHHHHh
Confidence 99998887642 79999999999987532221111 247899999999999999999999999876 3332
Q ss_pred H--------------------------------HHhc--CCCCCcHHHHHH-----HHHHhCC-hHHHHHHHHHHHHHHH
Q 014492 305 L--------------------------------WRAK--QPYNVSVAAEVA-----ACAALQN-PIYLEKVKEALIKERE 344 (423)
Q Consensus 305 l--------------------------------~~~~--~~~~~~~~~~~a-----~~~~l~~-~~~~~~~~~~~~~~~~ 344 (423)
+ ++.. ...+++.+.|.+ +.++++. .++.+++++.++++++
T Consensus 338 l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~~~~~~~~~~~~~~~~Rr~ 417 (527)
T PRK09275 338 LPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALLDEEDAYKKAMKDIIRRRYK 417 (527)
T ss_pred ccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHH
Confidence 2 2222 235677788876 3355654 5688999999999999
Q ss_pred HHHHHHccCCCCeecCCCceEEEEEeCC----------------CCCHHHHHHHHH-hCCcEEEeCCCCC-CCCeEEEEe
Q 014492 345 RLFKLLKDVPFLNPYPSYSNFILCEVTS----------------GMDAKKLKDDLA-KMGVMIRHYNNKE-LKGYVRVSV 406 (423)
Q Consensus 345 ~l~~~L~~~~~~~~~p~~~~~~~~~~~~----------------~~~~~~l~~~L~-~~gI~v~~~~~~~-~~~~iRis~ 406 (423)
.+.+.|. ++.....|.+++|+|++++. ..+..+++.+|. ++||.+.||..++ .++++|||+
T Consensus 418 ~l~~~Lg-~~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e~gV~v~PG~~Fg~~~~~vRis~ 496 (527)
T PRK09275 418 ALYEGLG-LPEPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEETGVVLLPGGGFGGPEWSVRVSL 496 (527)
T ss_pred HHHHHcC-CCCcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhcCCEEEeCchhhCCCCCeEEEEE
Confidence 9999883 33222357889999998863 135778888887 7899999998854 367999999
Q ss_pred cChhhHHHHHHHHhhh
Q 014492 407 GKPEHTDALMECLMHL 422 (423)
Q Consensus 407 ~~~~~~~~l~~al~~l 422 (423)
+..++ +.+.++.++|
T Consensus 497 a~~~~-~~~~~~~~rl 511 (527)
T PRK09275 497 ANLNE-EDYAKIGKAI 511 (527)
T ss_pred ecCCH-HHHHHHHHHH
Confidence 85432 5677776665
No 95
>PRK06836 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.4e-42 Score=337.79 Aligned_cols=320 Identities=25% Similarity=0.417 Sum_probs=262.4
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhcC-C----CCCCC-CCcchHHHHHHHHHHhC------CCCCcEEEeCCHHHHHHHH
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQL-K----FPYIY-PDPESRRLRAALAKDSG------LESDHILVGCGADELIDLI 162 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~----~~~~Y-~~~g~~~lr~~ia~~~g------~~~~~i~~t~G~~~al~~~ 162 (423)
.++++|+.+.+++++++.+.+++.+. . ...+| +..|..++|++++++++ +++++|++|+|+++++..+
T Consensus 33 ~~~~~l~~g~p~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~~~ 112 (394)
T PRK06836 33 DNVFDFSLGNPSVPPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALNVA 112 (394)
T ss_pred CCeEEecCcCCCCCCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHHHHH
Confidence 46799999988788888888888652 1 13568 55689999999999973 5789999999999999999
Q ss_pred HHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCC-CCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHH
Q 014492 163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD-FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL 241 (423)
Q Consensus 163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~ 241 (423)
++.++++||.|++++|+|..+...++..|++++.+|.+++ +++|++++++.+. ++++++++++||||||.+++.++++
T Consensus 113 ~~~l~~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~~~-~~~~~v~~~~p~NPtG~~~~~~~~~ 191 (394)
T PRK06836 113 LKAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTDTFQPDLDALEAAIT-PKTKAVIINSPNNPTGVVYSEETLK 191 (394)
T ss_pred HHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEEecCCccCcCCHHHHHhhcC-cCceEEEEeCCCCCCCcCCCHHHHH
Confidence 9999999999999999999999999999999999997654 7899999999996 6899999999999999999999988
Q ss_pred HHHcC----------CCEEEEccCCccccCCCch-hhhhccCCcEEEEccChhhhcccCccccccccCHHHHHH------
Q 014492 242 KILEM----------PILVVLDEAYTEFSGLESR-MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY------ 304 (423)
Q Consensus 242 ~i~~~----------~~~li~Deay~~~~~~~~~-~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~------ 304 (423)
+|++. ++++|+||+|.++.+++.. .......+++++++||||.||+||+|+||+++++++.+.
T Consensus 192 ~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pGlRiG~~~~~~~~~~~~~~~~~ 271 (394)
T PRK06836 192 ALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYYDNSIVVYSFSKSLSLPGERIGYIAVNPEMEDADDLVAA 271 (394)
T ss_pred HHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHccCcEEEEecchhhccCcceeeEEEecCHHHhhhHHHHHH
Confidence 87532 6899999999998765422 222334678999999999999999999999998776332
Q ss_pred HHHhcC---CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHH
Q 014492 305 LWRAKQ---PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKD 381 (423)
Q Consensus 305 l~~~~~---~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~ 381 (423)
+..... .++.+.+.|.++..++++.. .++.++++++.+.+.|+++++....|.+|+|+|+++|. .+..++++
T Consensus 272 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~----~~~~~~~~r~~l~~~L~~~g~~~~~~~gg~~~~~~~~~-~~~~~~~~ 346 (394)
T PRK06836 272 LVFANRILGFVNAPALMQRVVAKCLDATV----DVSIYKRNRDLLYDGLTELGFECVKPQGAFYLFPKSPE-EDDVAFCE 346 (394)
T ss_pred HHHHhhccccccCCHHHHHHHHHHhCChH----HHHHHHHHHHHHHHHHHhCCCEeecCCceEEEEEeCCC-CCHHHHHH
Confidence 211111 24678889999999987642 35667888999999998886433456778999999985 57888998
Q ss_pred HHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 382 DLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 382 ~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.|.++||.++++..+...+++||+++.. .+++.+++++|
T Consensus 347 ~l~~~gv~v~~g~~f~~~~~iRi~~~~~--~~~~~~~i~~l 385 (394)
T PRK06836 347 KAKKHNLLLVPGSGFGCPGYFRLSYCVD--TETIERSLPAF 385 (394)
T ss_pred HHHhCCEEEECchhcCCCCeEEEEecCC--HHHHHHHHHHH
Confidence 8889999999987766678999999843 48888888876
No 96
>PLN02672 methionine S-methyltransferase
Probab=100.00 E-value=1.1e-41 Score=358.23 Aligned_cols=328 Identities=16% Similarity=0.239 Sum_probs=255.1
Q ss_pred CCCCeeEcCCCCCCCCCCHHHHHHHhc-CCC-CCCCCCcc-hHHHHHHHHHHhCCCCC---cEEEeCCHHHHHHHHHHHh
Q 014492 93 KPEDIVKIDANENPYGPPPEVREALGQ-LKF-PYIYPDPE-SRRLRAALAKDSGLESD---HILVGCGADELIDLIMRCV 166 (423)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~-~~~Y~~~g-~~~lr~~ia~~~g~~~~---~i~~t~G~~~al~~~~~~l 166 (423)
.+.++|+|+.|+|++++++.+.+++.+ +.. .+.++.+. ...+++.+++++|++.+ +|++|+|+++++..+++++
T Consensus 695 ~g~~vI~LsinE~d~ppPp~V~eAi~eal~~~~~s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~lll~aL 774 (1082)
T PLN02672 695 QESSLIHMDVDESFLPVPSAVKASIFESFVRQNISESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNKLVLCC 774 (1082)
T ss_pred CCCCEEEEeCCCCCCCCCHHHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHHHHHHH
Confidence 356889999999999999999999876 222 12112221 45666666677787553 8999999999999999999
Q ss_pred cCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCC-CCcCcCCCHHHHHHH
Q 014492 167 LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPN-NPDGSIINDEDLLKI 243 (423)
Q Consensus 167 ~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~-NPtG~~~~~~~l~~i 243 (423)
++|||.|+++.|+|+.|...++..|++++.+|++ ++|.+|++++++++.+.+.++|++|+|| ||||.+++.+++++|
T Consensus 775 l~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L~nPnhNPTG~v~S~eeLe~L 854 (1082)
T PLN02672 775 VQEGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYISGPTINPTGLLYSNSEIEEI 854 (1082)
T ss_pred cCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCCEEEEECcCCCCcCccCCHHHHHHH
Confidence 9999999999999999999999999999999975 4788999999999864345689999997 999999999999998
Q ss_pred HcC----CCEEEEccCCccccCCCch------hhhh---cc---CCcEEEEccChhhhcccCccccccccCH-HHHHHHH
Q 014492 244 LEM----PILVVLDEAYTEFSGLESR------MEWV---KK---HDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLW 306 (423)
Q Consensus 244 ~~~----~~~li~Deay~~~~~~~~~------~~~~---~~---~~~~i~i~S~SK~~g~~G~R~G~i~~~~-~~~~~l~ 306 (423)
++. +++||+||+|.++.+.+.. ...+ .. ..++++++||||.|+++|+|+||+++++ ++++.+.
T Consensus 855 lela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap~~eLi~~l~ 934 (1082)
T PLN02672 855 LSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALNDSVLIDAFH 934 (1082)
T ss_pred HHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEeCCHHHHHHHH
Confidence 864 8999999999987764321 1111 11 2379999999999999999999999964 5888887
Q ss_pred HhcCCCCC---cHHHHHHHHHHhC--Ch---HHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCC------
Q 014492 307 RAKQPYNV---SVAAEVAACAALQ--NP---IYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS------ 372 (423)
Q Consensus 307 ~~~~~~~~---~~~~~~a~~~~l~--~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~------ 372 (423)
+....... +..++.++..++. +. +++.+.++.++++++++.+.|++.++....|.+++|+|++++.
T Consensus 935 ~~~~~s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~Gi~v~~PeGGFfLwl~l~~~l~~~~ 1014 (1082)
T PLN02672 935 SAPGLSRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEACGWDVLEPQGGISMVAKPSAYLGKTV 1014 (1082)
T ss_pred HhhhhcCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHCCCeEecCCcEEEEEEEccccccccc
Confidence 75433222 3334444444442 33 3466778889999999999999886544456778889987531
Q ss_pred -----------CCCHHHHHHHHHh-CCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 373 -----------GMDAKKLKDDLAK-MGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 373 -----------~~~~~~l~~~L~~-~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
+.++.++++.|.+ .||.+.+|..++.++|+||+++..+ +++.+++++|
T Consensus 1015 ~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~~RIsfa~~~--e~LeeALerL 1074 (1082)
T PLN02672 1015 KLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGYCRFSFALED--SEFDRALKAI 1074 (1082)
T ss_pred cccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCeEEEEecCCH--HHHHHHHHHH
Confidence 2467889999984 5999999977677899999999743 6688888776
No 97
>PLN02231 alanine transaminase
Probab=100.00 E-value=4.5e-41 Score=339.35 Aligned_cols=324 Identities=17% Similarity=0.273 Sum_probs=248.6
Q ss_pred CeeEcCCCCCCCCCCHHHHHHHhcCC-----CCCCCC-CcchHHHHHHHHHHh----C--CCCCcEEEeCCHHHHHHHHH
Q 014492 96 DIVKIDANENPYGPPPEVREALGQLK-----FPYIYP-DPESRRLRAALAKDS----G--LESDHILVGCGADELIDLIM 163 (423)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~~-----~~~~Y~-~~g~~~lr~~ia~~~----g--~~~~~i~~t~G~~~al~~~~ 163 (423)
++|++..+...|+. ..+.++...+. ....|+ ..|.++||+++++++ | +++++|++|+|+++++..++
T Consensus 130 ~~i~~~~~~~~fp~-~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~ 208 (534)
T PLN02231 130 SLLDKSETHGLFSA-DAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMM 208 (534)
T ss_pred ccCCCCCccccCCH-HHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHH
Confidence 56777665555653 33333332221 125584 458999999999987 4 57899999999999999999
Q ss_pred HHhcC-CCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC--CCCCCHHHHHHHhhcC-----CceEEEEcCCCCCcCcCC
Q 014492 164 RCVLD-PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSII 235 (423)
Q Consensus 164 ~~l~~-~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~ 235 (423)
+.++. +||.|+++.|+|+.|...++..|++++.+++++ +|++|+++|++.+++. ++|+++++|||||||.++
T Consensus 209 ~~l~~~~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vl 288 (534)
T PLN02231 209 QLLIRSEKDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVL 288 (534)
T ss_pred HHhccCCCCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCC
Confidence 99984 799999999999999999999999999999753 5899999999988631 689999999999999999
Q ss_pred CHHHHHHHHcC----CCEEEEccCCccccCCC--ch--hhhhc-------cCCcEEEEccChhhh-cccCcccccccc--
Q 014492 236 NDEDLLKILEM----PILVVLDEAYTEFSGLE--SR--MEWVK-------KHDNLIVLRTFSKRA-GLAGLRVGYGAF-- 297 (423)
Q Consensus 236 ~~~~l~~i~~~----~~~li~Deay~~~~~~~--~~--~~~~~-------~~~~~i~i~S~SK~~-g~~G~R~G~i~~-- 297 (423)
+.+++++|++. +++||+||+|.++.+++ .. ...+. ...++++++||||.+ |++|+|+||+++
T Consensus 289 s~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~ 368 (534)
T PLN02231 289 AEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTG 368 (534)
T ss_pred CHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEec
Confidence 99999998875 99999999999988742 11 11111 123689999999975 899999999986
Q ss_pred -CHHHHHHHHHhcCC-CCCcHHHHHHHHHHhCCh--------H---HHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCc
Q 014492 298 -PLSIIEYLWRAKQP-YNVSVAAEVAACAALQNP--------I---YLEKVKEALIKERERLFKLLKDVPFLNP-YPSYS 363 (423)
Q Consensus 298 -~~~~~~~l~~~~~~-~~~~~~~~~a~~~~l~~~--------~---~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~ 363 (423)
++++++.+.+.... .+.+...|.++..+++.+ . +.+.+++.++++++.+.+.|++++++.+ .|.++
T Consensus 369 ~~~~l~~~l~k~~~~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~~~~p~Gg 448 (534)
T PLN02231 369 FTSDVREQIYKVASVNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVTCNKAEGA 448 (534)
T ss_pred CCHHHHHHHHHHHhhhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCee
Confidence 68899888776543 345778888888888642 2 2335578899999999999998865664 57788
Q ss_pred eEEEEEe--CCC----------CCHHHHHHHHH-hCCcEEEeCCCCC---CCCeEEEEecChhhHHHHHHHHhhh
Q 014492 364 NFILCEV--TSG----------MDAKKLKDDLA-KMGVMIRHYNNKE---LKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 364 ~~~~~~~--~~~----------~~~~~l~~~L~-~~gI~v~~~~~~~---~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
+|+|+++ |.. .+...++..|+ ++||.+.||+.++ +..++|+++..++ +++.+++++|
T Consensus 449 fylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~~~~~--e~l~eal~RL 521 (534)
T PLN02231 449 MYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTILPQE--DKIPAIVSRL 521 (534)
T ss_pred eEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEEeCCCH--HHHHHHHHHH
Confidence 9999554 421 11234556666 7899999998753 3457999997643 6788888876
No 98
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.1e-41 Score=331.81 Aligned_cols=314 Identities=18% Similarity=0.206 Sum_probs=243.3
Q ss_pred CCeeEcCCCCC-CCCCCH----HHHHHHhcC---CCCCCCC-CcchHHHHHHHHHHh---C---CCCCcEE--EeCCHHH
Q 014492 95 EDIVKIDANEN-PYGPPP----EVREALGQL---KFPYIYP-DPESRRLRAALAKDS---G---LESDHIL--VGCGADE 157 (423)
Q Consensus 95 ~~~i~l~~~~~-~~~~~~----~v~~al~~~---~~~~~Y~-~~g~~~lr~~ia~~~---g---~~~~~i~--~t~G~~~ 157 (423)
++.++|+.|.+ ++.+++ .+.+++.+. .....|+ ..|.++||+++++++ + +++++|+ .|+|+++
T Consensus 29 ~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~~ 108 (404)
T PTZ00376 29 PSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSGTG 108 (404)
T ss_pred cccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccCcch
Confidence 56799999975 354433 344554332 1225684 468999999999986 2 4778998 5999999
Q ss_pred HHHHHHH---HhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC-C-CCCCCCHHHHHHHhhc--CCceEEEEcCCCCC
Q 014492 158 LIDLIMR---CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR-K-SDFSLNVELIADAVER--EKPKCIFLTSPNNP 230 (423)
Q Consensus 158 al~~~~~---~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~-~-~~~~~d~~~l~~~i~~--~~~~~i~l~~p~NP 230 (423)
++..++. .+++|||.|++++|+|+.|...++..|++++.+|+ + +++++|++.+++.+.+ .+++++++++||||
T Consensus 109 al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~NP 188 (404)
T PTZ00376 109 ALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHNP 188 (404)
T ss_pred HHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCCC
Confidence 9988865 56899999999999999999999999999999997 3 4589999999998853 34567778999999
Q ss_pred cCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc-----hhhh-hccCCcEEEEccChhhhcccCcccccc---cc
Q 014492 231 DGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES-----RMEW-VKKHDNLIVLRTFSKRAGLAGLRVGYG---AF 297 (423)
Q Consensus 231 tG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~-----~~~~-~~~~~~~i~i~S~SK~~g~~G~R~G~i---~~ 297 (423)
||.+++.+++++|++. +++||+||+|.+|.+++. .... ....+++++++||||.|+++|+|+||+ ++
T Consensus 189 TG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~~~ 268 (404)
T PTZ00376 189 TGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALHIVCA 268 (404)
T ss_pred CCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEEEEeC
Confidence 9999999999998764 999999999999987531 1122 223468999999999999999999998 57
Q ss_pred CHHHHHHH----HHhc-CCC-CCcHHHHHHHHHHhCChH----H---HHHHHHHHHHHHHHHHHHHccCCC---C-eecC
Q 014492 298 PLSIIEYL----WRAK-QPY-NVSVAAEVAACAALQNPI----Y---LEKVKEALIKERERLFKLLKDVPF---L-NPYP 360 (423)
Q Consensus 298 ~~~~~~~l----~~~~-~~~-~~~~~~~~a~~~~l~~~~----~---~~~~~~~~~~~~~~l~~~L~~~~~---~-~~~p 360 (423)
++++++.+ .+.. ..+ +.+.++|.++..+|++++ | +++.+++++++++.+.+.|++++. + ...|
T Consensus 269 ~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~p 348 (404)
T PTZ00376 269 NKEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKALGSPGDWEHIIN 348 (404)
T ss_pred CHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccc
Confidence 88765544 3322 334 457889999999998853 2 455677889999999999988742 2 2357
Q ss_pred CCceEEEEEeCCCCCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhh
Q 014492 361 SYSNFILCEVTSGMDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVG--KPEHTDALMECLMH 421 (423)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~l~~~L~-~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~ 421 (423)
.+|+|+|++++ .+++++|. ++||.+.+++ ||+++ ..++++.+.++|+.
T Consensus 349 ~gg~f~~~~~~-----~~~~~~L~~~~~v~v~p~~--------Ris~~~~~~~~~~~~~~~l~~ 399 (404)
T PTZ00376 349 QIGMFSFTGLT-----KEQVERLIEKYHIYLLDNG--------RISVAGLTSKNVDYVAEAIHD 399 (404)
T ss_pred CceEEEecCCC-----HHHHHHHHHhCCEeecCCC--------eEEEeccCHHhHHHHHHHHHH
Confidence 88999999874 57888888 5599998872 99998 66666677766654
No 99
>PLN02368 alanine transaminase
Probab=100.00 E-value=6.5e-42 Score=335.73 Aligned_cols=303 Identities=17% Similarity=0.269 Sum_probs=241.8
Q ss_pred HHHhcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCCCC--------C----------------------CCCHHHHHHH
Q 014492 68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENP--------Y----------------------GPPPEVREAL 117 (423)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~--------~----------------------~~~~~v~~al 117 (423)
++++..+..+. ...+...+.+....+.++|+|+.|+++ + .+++.+.+++
T Consensus 12 ~~~~~~~~~~~-~~~~~~~a~~~~~~g~~vi~l~iG~Pd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~i~~a~ 90 (407)
T PLN02368 12 NENVKKCQYAV-RGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPADAIARAK 90 (407)
T ss_pred CHHHHhhhhhc-CCHHHHHHHHHHHHhhhhhcccCCChhHcCCCCchHHHHHHHHhcCchhcCCccccccCCHHHHHHHH
Confidence 44455455442 334555666666667789999999886 3 1445555665
Q ss_pred hcC---C-CCCCCCCc-chHHHHHHHHHHh----C--CCCCcEEEeCCHHHHHHHHHHHhc-CCCCeEEEcCCCchhhHH
Q 014492 118 GQL---K-FPYIYPDP-ESRRLRAALAKDS----G--LESDHILVGCGADELIDLIMRCVL-DPGDKIVDCPPTFTMYEF 185 (423)
Q Consensus 118 ~~~---~-~~~~Y~~~-g~~~lr~~ia~~~----g--~~~~~i~~t~G~~~al~~~~~~l~-~~gd~Vl~~~p~y~~~~~ 185 (423)
..+ . ....|++. |.++||+++++++ | +++++|++|+|+++++..++.+++ ++||.|++++|+|+.|..
T Consensus 91 ~~l~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~ 170 (407)
T PLN02368 91 HYLSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSA 170 (407)
T ss_pred HHHhcCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHHH
Confidence 543 1 13568654 7899999999987 5 578999999999999999999887 799999999999999999
Q ss_pred HHHHCCCeEEEecCC--CCCCCCHHHHHHHhhc-----CCceEEEEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEcc
Q 014492 186 DAAVNGAAVVKVPRK--SDFSLNVELIADAVER-----EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDE 254 (423)
Q Consensus 186 ~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~-----~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~De 254 (423)
.++..|++++.++.+ ++|++|++++++.+++ .++|++++||||||||.+++.+++++|++. +++||+||
T Consensus 171 ~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE 250 (407)
T PLN02368 171 TISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDE 250 (407)
T ss_pred HHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEc
Confidence 999999999999964 3589999999998863 168999999999999999999999998874 99999999
Q ss_pred CCccccCCCc--hhh---hh---c----cCCcEEEEccChhhh-cccCccccccc---cCHHHHHHHHHhc-CCCCCcHH
Q 014492 255 AYTEFSGLES--RME---WV---K----KHDNLIVLRTFSKRA-GLAGLRVGYGA---FPLSIIEYLWRAK-QPYNVSVA 317 (423)
Q Consensus 255 ay~~~~~~~~--~~~---~~---~----~~~~~i~i~S~SK~~-g~~G~R~G~i~---~~~~~~~~l~~~~-~~~~~~~~ 317 (423)
+|.++.+++. ... .+ . ..+++|+++||||.| |++|+|+||++ +++++++.+.+.. ..++.+.+
T Consensus 251 ~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~~~~~~~~~~~ 330 (407)
T PLN02368 251 VYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKVASIALSPNVS 330 (407)
T ss_pred cccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHHhcccCCCCcH
Confidence 9999886431 111 11 1 245899999999998 89999999999 5889999988874 34788999
Q ss_pred HHHHHHHHhCCh--------HHH---HHHHHHHHHHHHHHHHHHccCCCCe-ecCCCceEEEEEeC
Q 014492 318 AEVAACAALQNP--------IYL---EKVKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVT 371 (423)
Q Consensus 318 ~~~a~~~~l~~~--------~~~---~~~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~~~~~~~~ 371 (423)
+|.++.++|++. ++. +++++.++++|+.+.+.|++++++. ..|++++|+|++++
T Consensus 331 ~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~P~Gafy~~~~i~ 396 (407)
T PLN02368 331 GQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCNFTEGAMYSFPQIK 396 (407)
T ss_pred HHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeCCCCeeeEeccCCC
Confidence 999999999753 244 3467889999999999999986665 46889999997664
No 100
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=100.00 E-value=7.1e-41 Score=332.50 Aligned_cols=322 Identities=18% Similarity=0.215 Sum_probs=244.4
Q ss_pred CCeeEcCCCCCCCCCC--HHHHHHHhcC-C------CCCCCCCc-chHHHHHHHHHHh------CCCCCcEEEeCCHHHH
Q 014492 95 EDIVKIDANENPYGPP--PEVREALGQL-K------FPYIYPDP-ESRRLRAALAKDS------GLESDHILVGCGADEL 158 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~--~~v~~al~~~-~------~~~~Y~~~-g~~~lr~~ia~~~------g~~~~~i~~t~G~~~a 158 (423)
.++|+|+.+.++..++ +.+.+++.+. . ....|+++ |..+||+++++++ ++++++|++|+|++++
T Consensus 30 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~a 109 (416)
T PRK09440 30 PGAIMLGGGNPAHIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQSA 109 (416)
T ss_pred CCceeccCCCCCccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccChHHH
Confidence 4579999988765443 3455665542 1 12468765 7899999999997 4688999999999999
Q ss_pred HHHHHHHhcC-----CCCeEEE-cCCCchhhHHHHHHCCC------eEEEecCCC-CCCCCHHHHHHHhhcCCceEEEEc
Q 014492 159 IDLIMRCVLD-----PGDKIVD-CPPTFTMYEFDAAVNGA------AVVKVPRKS-DFSLNVELIADAVEREKPKCIFLT 225 (423)
Q Consensus 159 l~~~~~~l~~-----~gd~Vl~-~~p~y~~~~~~~~~~g~------~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~ 225 (423)
+.+++++++. +||.|++ +.|+|+.|...++..|. .++.++.+. ++++|+++++ +. .+++++++|
T Consensus 110 l~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~-~~~~~i~l~ 186 (416)
T PRK09440 110 FFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--ID-EDTGAICVS 186 (416)
T ss_pred HHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cC-CCceEEEEe
Confidence 9999999985 5899999 79999999886654332 222232211 3689999997 33 678999999
Q ss_pred CCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCchhhhh-ccCCcEEEEccChhhhcccCccccccccCHH
Q 014492 226 SPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS 300 (423)
Q Consensus 226 ~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~~~~~-~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~ 300 (423)
|||||||.+++.+++++|++. +++||+||+|.++.......... ...+++|+++||||. +++|+|+||++++++
T Consensus 187 ~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~vI~~~SfSK~-~~pGlRiG~~i~~~~ 265 (416)
T PRK09440 187 RPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGIIFSEATPLWNPNIILCMSLSKL-GLPGVRCGIVIADEE 265 (416)
T ss_pred cCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCcchhhcCccccCCeEEEeccccc-CCCcceEEEEeCCHH
Confidence 999999999999999998874 99999999998654221111111 125789999999995 899999999999999
Q ss_pred HHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHH---H-HHHHHHHHHHHHHHHHccC-CC--Ce-ecCCCceEEEEEe
Q 014492 301 IIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE---K-VKEALIKERERLFKLLKDV-PF--LN-PYPSYSNFILCEV 370 (423)
Q Consensus 301 ~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~---~-~~~~~~~~~~~l~~~L~~~-~~--~~-~~p~~~~~~~~~~ 370 (423)
+++.+...... ++++.+.|.++..++++.++.+ + .++.++++++.+.+.|++. +. +. ..|.+|+|+|+++
T Consensus 266 l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~~p~gg~fiw~~~ 345 (416)
T PRK09440 266 IIEALSNMNGIISLAPGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRYLPDEPCLIHKPEGAIFLWLWF 345 (416)
T ss_pred HHHHHHHHHHHhccCCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCeEEecCCCceEEEEEC
Confidence 99999877654 4678999999999999866532 3 5666788888888888653 21 23 3577899999999
Q ss_pred CC-CCCHHHHHHHHHhCCcEEEeCCCC--C-------CCCeEEEEecChhhHHHHHHHHhhh
Q 014492 371 TS-GMDAKKLKDDLAKMGVMIRHYNNK--E-------LKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 371 ~~-~~~~~~l~~~L~~~gI~v~~~~~~--~-------~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
++ +.++.++.+.|.++||.+++++.+ + ..+++||+++.. .+++.+++++|
T Consensus 346 ~~~~~~~~~~~~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~~--~~~l~~~i~~l 405 (416)
T PRK09440 346 KDLPITTEELYQRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQD--DEEIEKGIAIL 405 (416)
T ss_pred CCCCCCHHHHHHHHHHCCEEEechHhhCCCCccccCCcCceEEEEecCC--HHHHHHHHHHH
Confidence 86 567889999998999999997653 1 135999999743 25677776665
No 101
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=3.9e-40 Score=324.90 Aligned_cols=315 Identities=18% Similarity=0.188 Sum_probs=239.9
Q ss_pred CCeeEcCCCC---CCCCCC--HHHHHHHhcCC---CCCCCC-CcchHHHHHHHHHHh---C---CCCCcE--EEeCCHHH
Q 014492 95 EDIVKIDANE---NPYGPP--PEVREALGQLK---FPYIYP-DPESRRLRAALAKDS---G---LESDHI--LVGCGADE 157 (423)
Q Consensus 95 ~~~i~l~~~~---~~~~~~--~~v~~al~~~~---~~~~Y~-~~g~~~lr~~ia~~~---g---~~~~~i--~~t~G~~~ 157 (423)
.+.|+|+.|. ++...+ +.+.+++.+.. ....|+ ..|.++||+++++++ + +++++| ++|+|+++
T Consensus 26 ~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~ 105 (396)
T PRK09257 26 PDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGTG 105 (396)
T ss_pred cCcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCccH
Confidence 4679999995 333333 67888877642 224684 458999999999996 2 367877 99999999
Q ss_pred HHHHHHHHh--cCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC--CCCCCCCHHHHHHHhhc--CCceEEEEcCCCCCc
Q 014492 158 LIDLIMRCV--LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER--EKPKCIFLTSPNNPD 231 (423)
Q Consensus 158 al~~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~NPt 231 (423)
++.++++.+ ++|||+|++++|+|+.|...++..|++++.+|. ++++++|++.+++.+.+ .+.+++++++|||||
T Consensus 106 al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~NPT 185 (396)
T PRK09257 106 ALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQAPAGDVVLLHGCCHNPT 185 (396)
T ss_pred HHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCC
Confidence 999998766 589999999999999999999999999999996 34689999999998863 234566668999999
Q ss_pred CcCCCHHHHHHHHcC----CCEEEEccCCccccCCC-c-h--hhhhc-cCCcEEEEccChhhhcccCcccccccc---CH
Q 014492 232 GSIINDEDLLKILEM----PILVVLDEAYTEFSGLE-S-R--MEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAF---PL 299 (423)
Q Consensus 232 G~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~-~-~--~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~---~~ 299 (423)
|.+++.+++++|++. +++||+||+|.++.++. . . ...+. ..+++++++||||.|+++|+|+||+++ ++
T Consensus 186 G~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~~~~~~ 265 (396)
T PRK09257 186 GADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYGERVGALSVVAEDA 265 (396)
T ss_pred CCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCccccccceeEEEEeCCH
Confidence 999999999998874 89999999999988641 1 1 11222 356899999999999999999999973 44
Q ss_pred HH----HHHHHHhc-CC-CCCcHHHHHHHHHHhCCh-------HHHHHHHHHHHHHHHHHHHHHccCC---CCe-ecCCC
Q 014492 300 SI----IEYLWRAK-QP-YNVSVAAEVAACAALQNP-------IYLEKVKEALIKERERLFKLLKDVP---FLN-PYPSY 362 (423)
Q Consensus 300 ~~----~~~l~~~~-~~-~~~~~~~~~a~~~~l~~~-------~~~~~~~~~~~~~~~~l~~~L~~~~---~~~-~~p~~ 362 (423)
+. ++.+.... .. ++++.+.|.++..++++. +++++++++++++++.+.+.|+++. .+. ..|.+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~~~~~~~~~~~p~g 345 (396)
T PRK09257 266 EEADRVLSQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLVEALKAKGPSRDFDFIARQR 345 (396)
T ss_pred HHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccc
Confidence 43 33343332 22 456888999999999874 3466789999999999999998864 133 45889
Q ss_pred ceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 363 SNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 363 ~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
|+|+|++++ .+.+.+.+.++||.+.+. + ||+++..+ .+.+.+++++|
T Consensus 346 g~~~w~~l~----~~~~~~l~~~~~V~~~p~------~--ri~~~~~~-~~~i~~~~~~i 392 (396)
T PRK09257 346 GMFSYSGLT----PEQVDRLREEFGVYAVGS------G--RINVAGLN-ESNIDYVAEAI 392 (396)
T ss_pred eEEEecCCC----HHHHHHHHHcCCEEEcCC------C--eEEEeeCC-HHHHHHHHHHH
Confidence 999999884 333444345889998773 2 99997422 25566666655
No 102
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=100.00 E-value=2.6e-40 Score=329.13 Aligned_cols=322 Identities=19% Similarity=0.242 Sum_probs=237.7
Q ss_pred CeeEcCCCCCCCCCCHHHHHHHhcCCCCCCCCC-cchHHHHHHHH-HHh----C---CCCC--cEEEeCCHHHHHHHHHH
Q 014492 96 DIVKIDANENPYGPPPEVREALGQLKFPYIYPD-PESRRLRAALA-KDS----G---LESD--HILVGCGADELIDLIMR 164 (423)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y~~-~g~~~lr~~ia-~~~----g---~~~~--~i~~t~G~~~al~~~~~ 164 (423)
++|+++.+++++++++.+.++...+. +..||. .+...++++++ +++ + .+++ +|++|+|+++++..++.
T Consensus 95 ~~i~l~~g~p~~~~~~~~~~~~~~~~-~~~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~ 173 (521)
T TIGR03801 95 DIISYVIDQLGFDPDAFLYEMCDGII-GDNYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFD 173 (521)
T ss_pred HHHhhcCCCCCCCCCHHHHHHHHHhh-cCCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHH
Confidence 56899999999987655544443332 235754 35566666666 443 2 2333 89999999999999988
Q ss_pred H-----hcCCCCeEEEcCCCchhhHHHHHHC--CCeEEEecCCC--C-----CCCCHHHHHHHhhcCCceEEEEcCCCCC
Q 014492 165 C-----VLDPGDKIVDCPPTFTMYEFDAAVN--GAAVVKVPRKS--D-----FSLNVELIADAVEREKPKCIFLTSPNNP 230 (423)
Q Consensus 165 ~-----l~~~gd~Vl~~~p~y~~~~~~~~~~--g~~~~~v~~~~--~-----~~~d~~~l~~~i~~~~~~~i~l~~p~NP 230 (423)
+ +++|||+|+++.|+|+.|...++.. |++++.++.+. + |.+|+++++++++ +++|+|+++|||||
T Consensus 174 ~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~-~~~kai~l~nP~NP 252 (521)
T TIGR03801 174 SLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRD-PSIKALFVVNPSNP 252 (521)
T ss_pred HHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcC-CCCcEEEEeCCCCC
Confidence 7 6899999999999999999987775 78888887532 2 8899999998876 79999999999999
Q ss_pred cCcCCCHHHHHHHHcC------CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHH----
Q 014492 231 DGSIINDEDLLKILEM------PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS---- 300 (423)
Q Consensus 231 tG~~~~~~~l~~i~~~------~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~---- 300 (423)
||.+++.+++++|++. +++||+||+|.+|.+........ ..+++++++||||.||++|||+||++++++
T Consensus 253 TG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~sl~~~-~~~~vI~v~SfSK~fg~~G~RlG~i~~~~~~v~d 331 (521)
T TIGR03801 253 PSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDDFRSLFAE-LPYNTIGVYSFSKYFGATGWRLGTIALHKDNIFD 331 (521)
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcccccchhhh-CCCCEEEEEcchhhccCchhhhhhhhcCchHHHH
Confidence 9999999998887542 79999999999987532221111 246899999999999999999999999764
Q ss_pred -HH--------HHH------------------------HHhc--CCCCCcHHHHH-----HHHHHhCC-hHHHHHHHHHH
Q 014492 301 -II--------EYL------------------------WRAK--QPYNVSVAAEV-----AACAALQN-PIYLEKVKEAL 339 (423)
Q Consensus 301 -~~--------~~l------------------------~~~~--~~~~~~~~~~~-----a~~~~l~~-~~~~~~~~~~~ 339 (423)
++ +.+ ++.. ...+++.+.|. ++.++++. .+|.+++++.+
T Consensus 332 ~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all~~~~~y~~~~~~~~ 411 (521)
T TIGR03801 332 KLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALMDKENAYKAETKDIC 411 (521)
T ss_pred HHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhccchhHHHHHHHHH
Confidence 22 111 1111 12456677665 34556654 46889999999
Q ss_pred HHHHHHHHHHHccCCCCeecCCCceEEEEEeCC-C---------------CCHHHHHHHHH-hCCcEEEeCCCCCC-CCe
Q 014492 340 IKERERLFKLLKDVPFLNPYPSYSNFILCEVTS-G---------------MDAKKLKDDLA-KMGVMIRHYNNKEL-KGY 401 (423)
Q Consensus 340 ~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~-~---------------~~~~~l~~~L~-~~gI~v~~~~~~~~-~~~ 401 (423)
+++++.+.+.| .++.....|.+++|+|+++++ + .+..+++.+|. ++||.+.||..++. +++
T Consensus 412 ~~R~~~l~~~L-g~~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~~~L~~e~gV~v~PG~~Fg~~~~~ 490 (521)
T TIGR03801 412 RRREKLLFRGL-GLPLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVLFRLAEETGIVLLPGGGFGGPEWS 490 (521)
T ss_pred HHHHHHHHHhc-CCCCcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHHHHHHHHhCCEEEeCchhcCCCCCe
Confidence 99999999998 333222346788999999973 1 15678888887 78999999987543 568
Q ss_pred EEEEecChhhHHHHHHHHhhh
Q 014492 402 VRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 402 iRis~~~~~~~~~l~~al~~l 422 (423)
+|||++...+ +.+.++.++|
T Consensus 491 vRisla~l~~-~~~~~~~~rl 510 (521)
T TIGR03801 491 VRVSLANLNE-YDYAEIGRAI 510 (521)
T ss_pred EEEEecCCCH-HHHHHHHHHH
Confidence 9999985332 4455555554
No 103
>PLN02397 aspartate transaminase
Probab=100.00 E-value=9.8e-40 Score=323.66 Aligned_cols=314 Identities=17% Similarity=0.232 Sum_probs=229.2
Q ss_pred CCCeeEcCCCC-CCCCCCH----HHHHHHhcC-C--CCCCC-CCcchHHHHHHHHHHh-CCC-----CCcE-----EEeC
Q 014492 94 PEDIVKIDANE-NPYGPPP----EVREALGQL-K--FPYIY-PDPESRRLRAALAKDS-GLE-----SDHI-----LVGC 153 (423)
Q Consensus 94 ~~~~i~l~~~~-~~~~~~~----~v~~al~~~-~--~~~~Y-~~~g~~~lr~~ia~~~-g~~-----~~~i-----~~t~ 153 (423)
....++++.+. ++...+| .+.++...+ . ....| |..|.++||+++++++ +.. +++| +.++
T Consensus 47 ~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~ 126 (423)
T PLN02397 47 SPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSGT 126 (423)
T ss_pred CcceEecccceeeCCCCCcccchHHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccch
Confidence 34568888775 3333333 455554332 2 22468 5568999999999987 221 2333 3444
Q ss_pred CHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC--CCCCCCCHHHHHHHhhc--CCceEEEEcCCCC
Q 014492 154 GADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER--EKPKCIFLTSPNN 229 (423)
Q Consensus 154 G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~N 229 (423)
|+.+ +...+..++.|||+|++++|+|+.|...++..|++++.+|+ ++++++|++.+++.+.+ .+++++++++|||
T Consensus 127 Ga~~-l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~N 205 (423)
T PLN02397 127 GSLR-LGAEFLARFYPGSTIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHN 205 (423)
T ss_pred HHHH-HHHHHHHHhCCCCEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCC
Confidence 4443 33333345579999999999999999999999999999986 24588999999888752 4678888899999
Q ss_pred CcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCC---c--hhhhh-ccCCcEEEEccChhhhcccCccccccc--c
Q 014492 230 PDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE---S--RMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGA--F 297 (423)
Q Consensus 230 PtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~---~--~~~~~-~~~~~~i~i~S~SK~~g~~G~R~G~i~--~ 297 (423)
|||.+++.+++++|++. +++||+||+|.+|.+++ . ..... ...+++|+++||||.|+++|+|+||++ +
T Consensus 206 PTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v~~~ 285 (423)
T PLN02397 206 PTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALSVVC 285 (423)
T ss_pred CCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEEEEe
Confidence 99999999999998874 99999999999998743 1 12222 234579999999999999999999984 3
Q ss_pred -CHHHHH----HHHHhcCC--CCCcHHHHHHHHHHhCCh----HH---HHHHHHHHHHHHHHHHHHHccCC----CCeec
Q 014492 298 -PLSIIE----YLWRAKQP--YNVSVAAEVAACAALQNP----IY---LEKVKEALIKERERLFKLLKDVP----FLNPY 359 (423)
Q Consensus 298 -~~~~~~----~l~~~~~~--~~~~~~~~~a~~~~l~~~----~~---~~~~~~~~~~~~~~l~~~L~~~~----~~~~~ 359 (423)
+++.++ .+.+.... ++.+.+.|.++..+|+++ +| +++++++++++|+.+.+.|++++ +..+.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~~~~~~~~~~ 365 (423)
T PLN02397 286 KSADVAVRVKSQLKLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEARGSPGDWSHIT 365 (423)
T ss_pred CCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccc
Confidence 555544 33343332 457788999999999875 33 56778899999999999999885 43456
Q ss_pred CCCceEEEEEeCCCCCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 360 PSYSNFILCEVTSGMDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 360 p~~~~~~~~~~~~~~~~~~l~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
|++|+|+|++++ .++++.|. ++||.+.+++ ||+++..+ .+.+.+++++|
T Consensus 366 p~gg~fl~~~l~-----~~~~~~Ll~~~~V~v~~~~--------Ri~~~~~~-~~~i~~~~~~i 415 (423)
T PLN02397 366 KQIGMFSFTGLN-----KEQVDRMTKEYHIYMTRDG--------RISMAGLS-SKNVPYLADAI 415 (423)
T ss_pred CCceEEEecCCC-----HHHHHHHHHhCCEEECCCC--------eEEEeeCC-HHHHHHHHHHH
Confidence 899999999884 45888886 7899997432 99997322 14455555554
No 104
>PRK08637 hypothetical protein; Provisional
Probab=100.00 E-value=6.4e-39 Score=315.32 Aligned_cols=306 Identities=21% Similarity=0.274 Sum_probs=235.4
Q ss_pred HHHHHHHhcC--CCCCCCCC-cchHHHHHHHHHHh-----CCCC---CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCC
Q 014492 111 PEVREALGQL--KFPYIYPD-PESRRLRAALAKDS-----GLES---DHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179 (423)
Q Consensus 111 ~~v~~al~~~--~~~~~Y~~-~g~~~lr~~ia~~~-----g~~~---~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~ 179 (423)
+.+.+++.+. ....+|++ .|.++||+++++++ ...+ ++|++|+|+++++.+++..++++||.|++++|+
T Consensus 23 ~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~ 102 (388)
T PRK08637 23 SSLQDLLNDLTPDEIFPYAPPQGIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFVDQGDTVLLPDHN 102 (388)
T ss_pred HHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhcCCCCEEEEcCCC
Confidence 4455555543 23367855 48899999999876 2332 578999999999999999999999999999999
Q ss_pred chhhHHHHH-HCCCeEEEecCC-CCCCCCHHHHHHHhh---cCCceEEEEcCCCCCcCcCCCHHHHHHHHc---------
Q 014492 180 FTMYEFDAA-VNGAAVVKVPRK-SDFSLNVELIADAVE---REKPKCIFLTSPNNPDGSIINDEDLLKILE--------- 245 (423)
Q Consensus 180 y~~~~~~~~-~~g~~~~~v~~~-~~~~~d~~~l~~~i~---~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~--------- 245 (423)
|+.|...+. ..|++++.+|.. +++++|++++++.++ +...++++++|||||||.+++.+++++|++
T Consensus 103 y~~~~~~~~~~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~ 182 (388)
T PRK08637 103 WGNYKLTFNTRRGAEIVTYPIFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAG 182 (388)
T ss_pred CccHHHHHHHhcCCEEEEecccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcC
Confidence 999998754 689999999973 556899999999875 234456777899999999999999999876
Q ss_pred CCCEEEEccCCccccCCCchh----hh-hccCCcE--EEEccChhhhcccCccccccccC------HHHHHHHHHh----
Q 014492 246 MPILVVLDEAYTEFSGLESRM----EW-VKKHDNL--IVLRTFSKRAGLAGLRVGYGAFP------LSIIEYLWRA---- 308 (423)
Q Consensus 246 ~~~~li~Deay~~~~~~~~~~----~~-~~~~~~~--i~i~S~SK~~g~~G~R~G~i~~~------~~~~~~l~~~---- 308 (423)
.+++||+||+|.+|.+++... .. .+..+++ ++++|+||.|++||+|+||++.+ +++++.+.+.
T Consensus 183 ~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l~~~~~~~~~~~ 262 (388)
T PRK08637 183 TKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQTVKEALEKKVKGL 262 (388)
T ss_pred CcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEccccCCcHHHHHHHHHHHHHH
Confidence 389999999999997654221 12 2334575 45679999999999999999854 6777776542
Q ss_pred -c-CCCCCcHHHHHHHHHHhCChHHH---HHHHHHHHHHHHHHHHHHccCC---CCe-ecCCCceEEEEEeCCCCCHHHH
Q 014492 309 -K-QPYNVSVAAEVAACAALQNPIYL---EKVKEALIKERERLFKLLKDVP---FLN-PYPSYSNFILCEVTSGMDAKKL 379 (423)
Q Consensus 309 -~-~~~~~~~~~~~a~~~~l~~~~~~---~~~~~~~~~~~~~l~~~L~~~~---~~~-~~p~~~~~~~~~~~~~~~~~~l 379 (423)
. ..++.|.++|.++..+|+++.|. ++.+..++++++.+.+.|++.+ .+. ..|++|+|+|++++ +.++.++
T Consensus 263 ~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~l~-~~~~~~l 341 (388)
T PRK08637 263 IRSNISNGPHPSQSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYPFNSGYFMCLKLK-GVDAEEL 341 (388)
T ss_pred hhcccCCCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccccceEEEEecCC-hHHHHHH
Confidence 1 23578999999999999886653 4455668888888888887652 233 34578899999997 4567889
Q ss_pred HHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 380 KDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 380 ~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.+.|. ++||.+.+.+ ++++||+++..+ .+++.+++++|
T Consensus 342 ~~~l~~~~gv~~~~~~----~~~iRi~~~~~~-~~~i~~~~~~l 380 (388)
T PRK08637 342 RVHLLEKYGIGTIALN----ETDLRIAFSCVE-EEDIPELFDSI 380 (388)
T ss_pred HHHHhhhcceEEEecc----CCceEEEeecCC-HHHHHHHHHHH
Confidence 99986 7899887542 679999998744 37788877765
No 105
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=2e-38 Score=291.70 Aligned_cols=298 Identities=21% Similarity=0.288 Sum_probs=249.9
Q ss_pred CCCCCc-chHHHHHHHHHHh--------CCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHH-CCCe
Q 014492 124 YIYPDP-ESRRLRAALAKDS--------GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV-NGAA 193 (423)
Q Consensus 124 ~~Y~~~-g~~~lr~~ia~~~--------g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~-~g~~ 193 (423)
..|.|. |...+|+++|+++ ..+|+++++++|++.+++.++-+|++|||..+++.|.|+++...++. .|++
T Consensus 115 a~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~rTgve 194 (471)
T KOG0256|consen 115 AMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLRWRTGVE 194 (471)
T ss_pred hhcccccCchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccceeccCce
Confidence 346554 7899999999997 25899999999999999999999999999999999999999887775 6999
Q ss_pred EEEecC--CCCCCCCHHHHHHHhhc-----CCceEEEEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCC
Q 014492 194 VVKVPR--KSDFSLNVELIADAVER-----EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGL 262 (423)
Q Consensus 194 ~~~v~~--~~~~~~d~~~l~~~i~~-----~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~ 262 (423)
+++|.+ .++|.++.+++|+++.+ .++|.|+++||+||.|++++++++..++++ ++.||+||+|+.-.++
T Consensus 195 ivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~ 274 (471)
T KOG0256|consen 195 IVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFD 274 (471)
T ss_pred EEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccccC
Confidence 999984 46889999999998854 478999999999999999999999999986 9999999999987665
Q ss_pred Cchh----hh---hc-cCCcEEEEccChhhhcccCcccccccc-CHHHHHHHHHhcCCCCCcHHHHHHHHHHhCCh----
Q 014492 263 ESRM----EW---VK-KHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQPYNVSVAAEVAACAALQNP---- 329 (423)
Q Consensus 263 ~~~~----~~---~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~-~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~---- 329 (423)
.+.. .. .. ..+++.++.|+||.||+||+|+|.+.. ++++.....+....+.+|+..|..+..+|.|.
T Consensus 275 ~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~kmssf~~vSs~tQ~~la~LLSD~~f~~ 354 (471)
T KOG0256|consen 275 KSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKMSSFGLVSSQTQYLLASLLSDEEFTR 354 (471)
T ss_pred ccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHHHhhccCCcHHHHHHHHHHhchHHHHH
Confidence 4321 11 11 467899999999999999999999998 66788888888888899999999999999985
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCC------CCHHHHHHHHHhC-CcEEEeCCC--CCCCC
Q 014492 330 IYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSG------MDAKKLKDDLAKM-GVMIRHYNN--KELKG 400 (423)
Q Consensus 330 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~------~~~~~l~~~L~~~-gI~v~~~~~--~~~~~ 400 (423)
.++.+..++++.+.+++.+.|++++.-.....+|.|+|+++..- ....++.+.+..+ ++.+.||+. ...+|
T Consensus 355 ~yl~en~~Rl~~rh~~~~~gLk~lgI~cl~s~AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~~vklnlSpG~s~~C~EpG 434 (471)
T KOG0256|consen 355 EYLRENNKRLRIRHRYIVEGLKALGIPCLKSNAGLFCWVDLRKLLTSLTFEGELELWERILDNVKLNLSPGSSCHCHEPG 434 (471)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHhcCCceeecCCeeEEEEEhHHhcCcCChHHHHHHHHHHHHhhccccCCCCcceecCCC
Confidence 45778899999999999999999875455678899999998631 2345678888855 999999998 45689
Q ss_pred eEEEEecChhhHHHHHHHHhhh
Q 014492 401 YVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 401 ~iRis~~~~~~~~~l~~al~~l 422 (423)
|+|++|+...+ +.+.-|++|+
T Consensus 435 WFRvcFAn~~~-~t~~~am~Ri 455 (471)
T KOG0256|consen 435 WFRVCFANMSE-ETLEVAMRRL 455 (471)
T ss_pred eEEEEeccCCH-HHHHHHHHHH
Confidence 99999997653 3344477776
No 106
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=100.00 E-value=5.7e-34 Score=276.15 Aligned_cols=322 Identities=34% Similarity=0.517 Sum_probs=261.2
Q ss_pred eEcCCCCCCCCCCHHHHHHHhc--C-CCCCCC-CCcchHHHHHHHHHHhCCC------CCcEEEeCCHHHHHHHHHHHhc
Q 014492 98 VKIDANENPYGPPPEVREALGQ--L-KFPYIY-PDPESRRLRAALAKDSGLE------SDHILVGCGADELIDLIMRCVL 167 (423)
Q Consensus 98 i~l~~~~~~~~~~~~v~~al~~--~-~~~~~Y-~~~g~~~lr~~ia~~~g~~------~~~i~~t~G~~~al~~~~~~l~ 167 (423)
++|+.|.+++.++|.+.+++.+ . .....| +..+..++++.++++++.. ++++++++|+++++..++.++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~ 80 (350)
T cd00609 1 IDLSIGEPDFPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALL 80 (350)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhC
Confidence 4788899999998888777653 2 122445 4457889999999998644 6799999999999999999999
Q ss_pred CCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCH--HHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHH---
Q 014492 168 DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNV--ELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK--- 242 (423)
Q Consensus 168 ~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~--~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~--- 242 (423)
++||+|+++.|+|..+...++..|.+++.++.+++...+. +.++.... .++++|++++|+||||.+++.+++.+
T Consensus 81 ~~g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~v~i~~~~~~tG~~~~~~~l~~l~~ 159 (350)
T cd00609 81 NPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKT-PKTKLLYLNNPNNPTGAVLSEEELEELAE 159 (350)
T ss_pred CCCCEEEEcCCCchhHHHHHHHCCCEEEEEecccccCCccCHHHHHhhcC-ccceEEEEECCCCCCCcccCHHHHHHHHH
Confidence 9999999999999999999999999999999766655554 56666554 78999999999999999999998885
Q ss_pred HHcC-CCEEEEccCCccccCCCchh---hhhccCCcEEEEccChhhhcccCccccccccCH-HHHHHHHHhcCC--CCCc
Q 014492 243 ILEM-PILVVLDEAYTEFSGLESRM---EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWRAKQP--YNVS 315 (423)
Q Consensus 243 i~~~-~~~li~Deay~~~~~~~~~~---~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~-~~~~~l~~~~~~--~~~~ 315 (423)
+|+. |+++|+|++|..+...+... ......+.+++++|++|.++.+|.|+||+++++ ++.+.+...... ++.+
T Consensus 160 ~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~ 239 (350)
T cd00609 160 LAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKLLPYTTSGPS 239 (350)
T ss_pred HHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHHHHHHHHHHHhcccCCC
Confidence 5554 99999999999876543322 233456778999999999998999999999998 788888776655 6788
Q ss_pred HHHHHHHHHHhCCh-HHHHHHHHHHHHHHHHHHHHHccCCCCe-ecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeC
Q 014492 316 VAAEVAACAALQNP-IYLEKVKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHY 393 (423)
Q Consensus 316 ~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~ 393 (423)
...+.++..+++.. ++.++.+++++++++++.+.|++.++.. ..+..++|+|++++.+.+...+.+.|.++||.+.++
T Consensus 240 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~ 319 (350)
T cd00609 240 TLSQAAAAAALDDGEEHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDLPEGDDEEFLERLLLEAGVVVRPG 319 (350)
T ss_pred hHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEEEecCCCChHHHHHHHHHhCCEEEecc
Confidence 89999999999886 7888999999999999999999987655 467789999999975545666777777889999987
Q ss_pred CCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014492 394 NNKE--LKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 394 ~~~~--~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
..+. .+.++||+++.. .+++.++++.|
T Consensus 320 ~~~~~~~~~~iRi~~~~~--~~~i~~~~~al 348 (350)
T cd00609 320 SAFGEGGEGFVRLSFATP--EEELEEALERL 348 (350)
T ss_pred cccccCCCCeEEEEeeCC--HHHHHHHHHHh
Confidence 6543 678999999875 25555555544
No 107
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=100.00 E-value=1.6e-32 Score=267.39 Aligned_cols=319 Identities=21% Similarity=0.210 Sum_probs=240.9
Q ss_pred CCCCeeEcCCCCCCCC--CCHHHHHHHhcC-C-CCCC-------CCC-cchHHHHHHHHHHhCCCCCcEEEeCCHHHHHH
Q 014492 93 KPEDIVKIDANENPYG--PPPEVREALGQL-K-FPYI-------YPD-PESRRLRAALAKDSGLESDHILVGCGADELID 160 (423)
Q Consensus 93 ~~~~~i~l~~~~~~~~--~~~~v~~al~~~-~-~~~~-------Y~~-~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~ 160 (423)
.++++|||+.| ++++ ++|++.+++.+. . ++.. |+. +...+++++++++++. +++|++++|+.+.+
T Consensus 14 ~g~~~id~~~~-~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~-~~~i~~~~G~~~~~- 90 (360)
T TIGR00858 14 DGRRLLNFSSN-DYLGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKGT-EAALLFSSGYLANV- 90 (360)
T ss_pred CCceEEecccC-CcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC-CCEEEECchHHHHH-
Confidence 46779999998 4454 558888888762 1 1111 222 2256799999999984 67888988876555
Q ss_pred HHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc---CCceEEEEcCCCCCcCcCCCH
Q 014492 161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIIND 237 (423)
Q Consensus 161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~ 237 (423)
.++..++++||.|+++.|+|..+...++..|++++.++ .+|++.+++.+++ .++++|++++++||||...+.
T Consensus 91 ~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~-----~~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~~~ 165 (360)
T TIGR00858 91 GVISALVGKGDLILSDALNHASLIDGCRLSGARVRRYR-----HNDVEHLERLLEKNRGERRKLIVTDGVFSMDGDIAPL 165 (360)
T ss_pred HHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEec-----CCCHHHHHHHHHHcccCCCeEEEEeCCccCCCCCcCH
Confidence 56677889999999999999999998999999998887 3588999998864 247888888999999999999
Q ss_pred HHHHHHHcC-CCEEEEccCCccccCCCc---hhhh--hccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC
Q 014492 238 EDLLKILEM-PILVVLDEAYTEFSGLES---RMEW--VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP 311 (423)
Q Consensus 238 ~~l~~i~~~-~~~li~Deay~~~~~~~~---~~~~--~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~ 311 (423)
++|.++|+. |+++|+||+|..+.++.. .... +...+++++++|+||.||++| ||+++++++++.+.+....
T Consensus 166 ~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~g---G~~~~~~~~~~~~~~~~~~ 242 (360)
T TIGR00858 166 PQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSYG---AYVAGSQALIDYLINRART 242 (360)
T ss_pred HHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhccC---cEEEcCHHHHHHHHHhCcc
Confidence 999999997 999999999986543322 1111 123467899999999998777 9999999998887655433
Q ss_pred C----CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCC
Q 014492 312 Y----NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMG 387 (423)
Q Consensus 312 ~----~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~g 387 (423)
+ +.++..+.++.++++.....+..+++++++++++.+.|++++ +.+.++.++|+|+.++...+..++.+.|.++|
T Consensus 243 ~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 321 (360)
T TIGR00858 243 LIFSTALPPAVAAAALAALELIQEEPWRREKLLALIARLRAGLEALG-FTLMPSCTPIVPVIIGDNASALALAEELQQQG 321 (360)
T ss_pred ceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHcC-CccCCCCCCEEEEEeCCHHHHHHHHHHHHHCC
Confidence 2 345555666667775433445678899999999999999886 45567788999999975456788999999999
Q ss_pred cEEEeCCC---CCCCCeEEEEecChhhHHHHHHHHhhhC
Q 014492 388 VMIRHYNN---KELKGYVRVSVGKPEHTDALMECLMHLY 423 (423)
Q Consensus 388 I~v~~~~~---~~~~~~iRis~~~~~~~~~l~~al~~l~ 423 (423)
|.+.++.. ..+.+++||+++...+.+++.+++++|+
T Consensus 322 I~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 322 IFVGAIRPPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred eeEeeeCCCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 99987543 2345699999984333455666666553
No 108
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=100.00 E-value=1.5e-32 Score=264.27 Aligned_cols=293 Identities=16% Similarity=0.188 Sum_probs=223.2
Q ss_pred CCCCCHHHHHHHhcCCCCCCC-CC-cchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEc---CCCc
Q 014492 106 PYGPPPEVREALGQLKFPYIY-PD-PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDC---PPTF 180 (423)
Q Consensus 106 ~~~~~~~v~~al~~~~~~~~Y-~~-~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~---~p~y 180 (423)
.+..+|.+.++..+... .| +. .-..+|++++|+++|++++++++++|+.+++..++.+++++||.|+++ .|+|
T Consensus 31 gl~~~~~~~~~~~~~~~--~~~g~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~~~gd~Vli~~~d~p~~ 108 (346)
T TIGR03576 31 GLAGGFKIDEEDLELLE--TYVGPAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALEPPGRKVVHYLPEKPAH 108 (346)
T ss_pred cCCCChhHHHHHHHHHH--HhcCCHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhCCCCCEEEECCCCCCCc
Confidence 34457888877665311 12 11 236789999999999999999999999999999999999999999864 5799
Q ss_pred hhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCC
Q 014492 181 TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAY 256 (423)
Q Consensus 181 ~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay 256 (423)
..|...++..|++++.+ .|+++++. . .++++|+++ ++||+|.+++.+++.+|++. |++||+||+|
T Consensus 109 ~s~~~~~~l~ga~~~~~-------~~l~~l~~-~--~~~~lIiit-g~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy 177 (346)
T TIGR03576 109 PSIPRSCKLAGAEYFES-------DELSELKK-I--DGTSLVVIT-GSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDAS 177 (346)
T ss_pred hhHHHHHHHcCCEEecc-------CCHHHHhh-C--cCceEEEEE-CCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCc
Confidence 99999999999987543 24555432 2 467888885 46999999888888877653 9999999999
Q ss_pred ccccCC---CchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCC--CcHHHHHHHHHHhCChHH
Q 014492 257 TEFSGL---ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN--VSVAAEVAACAALQNPIY 331 (423)
Q Consensus 257 ~~~~~~---~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~--~~~~~~~a~~~~l~~~~~ 331 (423)
..+..+ ..... ..+..+++.|||| +++|+|+||+++++++++.+.+...++. .+++.+.++.++|+...
T Consensus 178 ~~~~~~~~~~~~~~---~~~~divv~s~SK--alaG~r~G~v~~~~~li~~l~~~~~~~~~s~~~~~~~aa~~aL~~~~- 251 (346)
T TIGR03576 178 GARVRRLYGQPPAL---DLGADLVVTSTDK--LMDGPRGGLLAGRKELVDKIKSVGEQFGLEAQAPLLAAVVRALEEFE- 251 (346)
T ss_pred cccccccCCCCCHH---HcCCcEEEeccch--hccccceEEEEeCHHHHHHHHHhhcCcccCccHHHHHHHHHHHhhcc-
Confidence 976522 11111 1123377789999 5789999999999999999998887754 68889999999997633
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHH-HHHHHhCCcEEEeCCCC-CCCCeEEEEecCh
Q 014492 332 LEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKL-KDDLAKMGVMIRHYNNK-ELKGYVRVSVGKP 409 (423)
Q Consensus 332 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l-~~~L~~~gI~v~~~~~~-~~~~~iRis~~~~ 409 (423)
.+..++.++++++.+.+.++++ .+.++.++|+|++++. .++.++ .+.|.++||.++++..+ ..++|+||+++.+
T Consensus 252 ~~~~~~~l~~r~~~~~~~l~~~---~~~~~~~~f~~~~~~~-~~~~~~~~~ll~~~gV~v~~~~~f~~~~~~vRis~~~~ 327 (346)
T TIGR03576 252 LSRIRDAFKRKEEVYLRLFDKL---NVERTPTGFVIKGVEE-EKLIEIGLDLLRNYGIITITAVGMPGASKTLRFDLAAK 327 (346)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC---CCCcCCCeEEEEeCCC-CCHHHHHHHHHHhCCEEEeCCcccCCCCCeEEEEEecC
Confidence 3566778888888888888754 3456677899999963 234344 45555899999998764 4578999999988
Q ss_pred h----hHHHHHHHHhh
Q 014492 410 E----HTDALMECLMH 421 (423)
Q Consensus 410 ~----~~~~l~~al~~ 421 (423)
+ +++.+.++|+.
T Consensus 328 ~~~~~~~~~~~~al~~ 343 (346)
T TIGR03576 328 DAERIGDDYLVEAVKD 343 (346)
T ss_pred hHHhcCHHHHHHHHHh
Confidence 8 58999999875
No 109
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=100.00 E-value=5.9e-32 Score=267.33 Aligned_cols=318 Identities=20% Similarity=0.212 Sum_probs=242.7
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCC-----------cchHHHHHHHHHHhCC-CCCcEEEeCCHHHHHHH
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQL-KFPYIYPD-----------PESRRLRAALAKDSGL-ESDHILVGCGADELIDL 161 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~-----------~g~~~lr~~ia~~~g~-~~~~i~~t~G~~~al~~ 161 (423)
.+.++|+.+.... .++.+.+++.+. ......+. ...+++|+.+++++|+ ++++|++|+|++++++.
T Consensus 18 ~~~~yld~a~~~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~~i~~ 96 (401)
T PRK10874 18 DAGVYLDSAATAL-KPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAKNIVWTRGTTESINL 96 (401)
T ss_pred CceEEEeCCcccC-CCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHH
Confidence 3468999877653 567888888652 11111111 1245899999999999 78999999999999999
Q ss_pred HHHHh----cCCCCeEEEcCCCchh----hHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCc
Q 014492 162 IMRCV----LDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS 233 (423)
Q Consensus 162 ~~~~l----~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~ 233 (423)
+++++ +++||+|++++|.|+. +...++..|++++.+|.+.++.+|++++++.+. +++++|++++|+||||.
T Consensus 97 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~-~~t~lv~i~~~~n~tG~ 175 (401)
T PRK10874 97 VAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGADRLPDVDLLPELIT-PRTRILALGQMSNVTGG 175 (401)
T ss_pred HHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCCCCcCCHHHHHHhcC-cCcEEEEEeCCcccccC
Confidence 99987 3789999999999863 556677889999999987777899999999996 68999999999999999
Q ss_pred CCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhc---
Q 014492 234 IINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK--- 309 (423)
Q Consensus 234 ~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~--- 309 (423)
+++.+++.++++. |+++|+|++|....... .+...+..+++.|++|.+|.+| +||++.++++++.+....
T Consensus 176 ~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~~----~~~~~~~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~~~~~~~ 249 (401)
T PRK10874 176 CPDLARAITLAHQAGMVVMVDGAQGAVHFPA----DVQALDIDFYAFSGHKLYGPTG--IGVLYGKSELLEAMSPWQGGG 249 (401)
T ss_pred cCCHHHHHHHHHHcCCEEEEECCcccccccC----CchhcCCCEEEEecccccCCCc--cEEEEEchHHHhcCCCeecCC
Confidence 9999999999987 99999999997433211 1122345588899999888777 599999999887654221
Q ss_pred --------------------CCCCCcHHHHHHHHHHhCCh--HHHHHHHHHHHHHHHHHHHHHccCCCCeec-CCCceEE
Q 014492 310 --------------------QPYNVSVAAEVAACAALQNP--IYLEKVKEALIKERERLFKLLKDVPFLNPY-PSYSNFI 366 (423)
Q Consensus 310 --------------------~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~~~~~~ 366 (423)
...+.+..++.++.++++.. ...++.+++.++.++++.+.|++++++.+. +..+.++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~i~ 329 (401)
T PRK10874 250 KMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLATLAEDALAKLPGFRSFRCQDSSLL 329 (401)
T ss_pred cceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCcEE
Confidence 01245555666666666431 123456788888999999999988666543 4555677
Q ss_pred EEEeCCCCCHHHHHHHHHhCCcEEEeCCCC--------CCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 367 LCEVTSGMDAKKLKDDLAKMGVMIRHYNNK--------ELKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 367 ~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~--------~~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
++.++ +.+.+++.+.|.++||.++++... +..++||||++ +.+|++++.++|+.
T Consensus 330 ~~~~~-~~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edid~ll~al~~ 394 (401)
T PRK10874 330 AFDFA-GVHHSDLVTLLAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVDALVNAVDR 394 (401)
T ss_pred EEEEC-CcCHHHHHHHHHHCCcEEeccccchHHHHHHhCCCCEEEEEecccCCHHHHHHHHHHHHH
Confidence 77776 567789999999999999987642 34689999998 88888888888865
No 110
>PRK10534 L-threonine aldolase; Provisional
Probab=100.00 E-value=6.5e-33 Score=267.45 Aligned_cols=304 Identities=17% Similarity=0.166 Sum_probs=222.2
Q ss_pred eeEcCCCCCCCCCCHHHHHHHhcC-CCCCCC-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEE
Q 014492 97 IVKIDANENPYGPPPEVREALGQL-KFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIV 174 (423)
Q Consensus 97 ~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl 174 (423)
+|||++|+|+. ++|.+.+++.+. .....| |++...+|++++++++|+++. ++++|+++++.+++.+++++||+|+
T Consensus 1 ~~~~~~~~~~~-p~~~~~~a~~~~~~~~~~Y~~~~~~~~L~~~la~~~g~~~~--~v~~~g~~a~~~~l~~~~~~gd~vi 77 (333)
T PRK10534 1 MIDLRSDTVTR-PSRAMLEAMMAAPVGDDVYGDDPTVNALQDYAAELSGKEAA--LFLPTGTQANLVALLSHCERGEEYI 77 (333)
T ss_pred CcccccccCCC-CCHHHHHHHHhccCCCcccCCCHHHHHHHHHHHHHhCCCeE--EEeCchHHHHHHHHHHhcCCCCeeE
Confidence 47999999999 889999999763 333568 888999999999999998544 5666667777777777899999999
Q ss_pred EcCCCchh-hHHH-HHHCC-CeEEEecCCCCCCCCHHHHHHHhhcC-----CceEEEEcCCCCCcCcCCCHHHHHHHHcC
Q 014492 175 DCPPTFTM-YEFD-AAVNG-AAVVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEM 246 (423)
Q Consensus 175 ~~~p~y~~-~~~~-~~~~g-~~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~~~~l~~i~~~ 246 (423)
++.|+|.. |... +...| ++++.++.++++.+|++++++++.+. ++++|++|||+ ||.+++.+++++|++.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~v~~~~~l~~i~~~ 155 (333)
T PRK10534 78 VGQAAHNYLYEAGGAAVLGSIQPQPIDAAADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGKVLPREYLKQAWEF 155 (333)
T ss_pred EechhhhhHhcCCchHHhcCceEEeecCCCCCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCeecCHHHHHHHHHH
Confidence 98888853 4321 23344 78888887778899999999998632 68999999766 5999999999877653
Q ss_pred ----CCEEEEccCCccccC--CCchhhhhccC-CcEEEEccChhhhcccCcccc-ccccCHHHHHHHHHhcCCCC----C
Q 014492 247 ----PILVVLDEAYTEFSG--LESRMEWVKKH-DNLIVLRTFSKRAGLAGLRVG-YGAFPLSIIEYLWRAKQPYN----V 314 (423)
Q Consensus 247 ----~~~li~Deay~~~~~--~~~~~~~~~~~-~~~i~i~S~SK~~g~~G~R~G-~i~~~~~~~~~l~~~~~~~~----~ 314 (423)
+++|++||+|..+.. .+.....+... ++++ .||||.||++ +| |+++++++++.+.+...++. .
T Consensus 156 ~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~~~~~~~--~s~SK~~~~~---~G~~~~~~~~~i~~~~~~~~~~~~~~~~ 230 (333)
T PRK10534 156 TRERNLALHVDGARIFNAVVAYGCELKEITQYCDSFT--ICLSKGLGTP---VGSLLVGNRDYIKRARRWRKMTGGGMRQ 230 (333)
T ss_pred HHHcCCeEEeeHHHHHHHHHHcCCCHHHHHhcCCEEE--EEeEcCCCCc---ccceEEcCHHHHHHHHHHHHHhCCchhh
Confidence 899999999873321 11222222223 3333 4899988764 67 68889999999987766443 2
Q ss_pred cHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCC
Q 014492 315 SVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYN 394 (423)
Q Consensus 315 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~ 394 (423)
+.+++.++..+|++ . .+..++.+++|+++.+.|++++ +.+.+++++|+|+++++ .+..++.+.|.++||.++++.
T Consensus 231 ~~~~~a~~~~~l~~--~-~~~~~~~~~~r~~l~~~L~~~g-~~~~~~~~nfv~~~~~~-~~~~~~~~~l~~~gi~v~~~~ 305 (333)
T PRK10534 231 AGILAAAGLYALKH--N-VARLQEDHDNAAWLAEQLREAG-ADVMRQDTNMLFVRVGE-EQAAALGEYMRERNVLINASP 305 (333)
T ss_pred HHHHHHHHHHHHHh--h-HHHHHHHHHHHHHHHHHHHhCC-CccCCCCceEEEEECCc-hhHHHHHHHHHHcCeeecCCc
Confidence 34567766666643 1 2333345567889999999886 46667789999999963 356788888889999998874
Q ss_pred CCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 395 NKELKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 395 ~~~~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
++|++.. +.++++++.++|+.
T Consensus 306 ------~~rl~~~~r~t~e~~~~~~~~l~~ 329 (333)
T PRK10534 306 ------IVRLVTHLDVSREQLAEVVAHWRA 329 (333)
T ss_pred ------eEEEEEEeCCCHHHHHHHHHHHHH
Confidence 4677663 45566666666654
No 111
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=100.00 E-value=2.1e-31 Score=263.23 Aligned_cols=318 Identities=19% Similarity=0.227 Sum_probs=240.2
Q ss_pred CeeEcCCCCCCCCCCHHHHHHHhcC-C-C--CCCC-CCc-------chHHHHHHHHHHhCCC-CCcEEEeCCHHHHHHHH
Q 014492 96 DIVKIDANENPYGPPPEVREALGQL-K-F--PYIY-PDP-------ESRRLRAALAKDSGLE-SDHILVGCGADELIDLI 162 (423)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~-~-~--~~~Y-~~~-------g~~~lr~~ia~~~g~~-~~~i~~t~G~~~al~~~ 162 (423)
+.++|+.+.... .++.+.+++.+. . . ...+ +.. ..+++|+.+++++|.+ +++|++|+|++++++++
T Consensus 16 ~~iyld~a~~~~-~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~~l~~~ 94 (398)
T TIGR03392 16 GTVYLDSAATAL-KPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAENIVWTRGTTESINLV 94 (398)
T ss_pred CeEEeeCccccC-CCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChHHHHHHH
Confidence 578999876653 567888887663 1 1 1111 111 2457999999999984 78999999999999999
Q ss_pred HHHh----cCCCCeEEEcCCCchh----hHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcC
Q 014492 163 MRCV----LDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI 234 (423)
Q Consensus 163 ~~~l----~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~ 234 (423)
+.++ +++||+|++++|.|+. +...++..|++++.+|.+.++.+|++++++.+. +++++|++++|+||||.+
T Consensus 95 ~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~i~-~~t~lv~i~~~~n~tG~~ 173 (398)
T TIGR03392 95 AQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGADLLPDIRQLPELLT-PRTRILALGQMSNVTGGC 173 (398)
T ss_pred HHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHHhc-cCceEEEEECcccccccc
Confidence 9987 4789999999999864 455667899999999987777899999999996 689999999999999999
Q ss_pred CCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhc----
Q 014492 235 INDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK---- 309 (423)
Q Consensus 235 ~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~---- 309 (423)
++.+++.++|+. |+++++|++|........ +...+..+++.|++|.+|.+| +||++.++++++.+....
T Consensus 174 ~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~----~~~~~~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~~~~~~~~ 247 (398)
T TIGR03392 174 PDLARAITLAHQYGAVVVVDGAQGVVHGPPD----VQALDIDFYAFSGHKLYGPTG--IGVLYGKTELLEAMPPWQGGGK 247 (398)
T ss_pred CCHHHHHHHHHHcCCEEEEEhhhhcCCCCCC----hhhcCCCEEEEecccccCCCc--eEEEEEcHHHHhhCCCeecCCc
Confidence 999999999987 999999999975432111 112334578888999888666 899999998887663211
Q ss_pred -------------------CCCCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeec-CCCceEEE
Q 014492 310 -------------------QPYNVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPY-PSYSNFIL 367 (423)
Q Consensus 310 -------------------~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~~~~~~~ 367 (423)
...+.+..+..++.++++. ...+++..++.++.++++.+.|++++++.+. +....+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~l~g~~~~~~~~~~i~~ 327 (398)
T TIGR03392 248 MLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQLPGFRSFRCPGSSLLA 327 (398)
T ss_pred eEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCcEEE
Confidence 0124455555555555542 1224567788889999999999988766644 33455667
Q ss_pred EEeCCCCCHHHHHHHHHhCCcEEEeCCCC--------CCCCeEEEEe---cChhhHHHHHHHHhhh
Q 014492 368 CEVTSGMDAKKLKDDLAKMGVMIRHYNNK--------ELKGYVRVSV---GKPEHTDALMECLMHL 422 (423)
Q Consensus 368 ~~~~~~~~~~~l~~~L~~~gI~v~~~~~~--------~~~~~iRis~---~~~~~~~~l~~al~~l 422 (423)
+.++ +.+..++.+.|.++||.++.+... +.+++||||+ .+.+|++++.++|+.+
T Consensus 328 ~~~~-~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei~~l~~~l~~~ 392 (398)
T TIGR03392 328 FDFA-GVHHSDLAALLAESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDVDALVDAVGAA 392 (398)
T ss_pred EEeC-CcCHHHHHHHHHhCCEEEecCccchHHHHHHhCCCCEEEEEeeccCCHHHHHHHHHHHHHH
Confidence 7776 567889999999999999987642 2357999998 6788888888888653
No 112
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=6e-32 Score=251.04 Aligned_cols=296 Identities=18% Similarity=0.237 Sum_probs=237.7
Q ss_pred CCC-CCcchHHHHHHHHHHhC-------CCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEE
Q 014492 124 YIY-PDPESRRLRAALAKDSG-------LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVV 195 (423)
Q Consensus 124 ~~Y-~~~g~~~lr~~ia~~~g-------~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~ 195 (423)
..| +..|.++|...+.++.+ .+.-+|++|+|.+.+++.+++.++++||.|+++..+|+......+..|++++
T Consensus 94 lQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~s~~a~gv~~i 173 (472)
T KOG0634|consen 94 LQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQSMEALGVKII 173 (472)
T ss_pred hccccccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHHhccccCceEE
Confidence 457 44588999999999765 1223899999999999999999999999999999999988888899999999
Q ss_pred EecCCCCCCCCHHHHHHHhhc--------CCceEEEEc-CCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCC
Q 014492 196 KVPRKSDFSLNVELIADAVER--------EKPKCIFLT-SPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGL 262 (423)
Q Consensus 196 ~v~~~~~~~~d~~~l~~~i~~--------~~~~~i~l~-~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~ 262 (423)
+|++|.+ ++++|.|++.+.+ ++++++|.. +-+||||..++.+..++|.++ ++++|+||.|..+.+.
T Consensus 174 pv~md~~-Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~Lq~~ 252 (472)
T KOG0634|consen 174 PVKMDQD-GIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFLQMN 252 (472)
T ss_pred eccccCC-CCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccceeecc
Confidence 9998654 8999999998854 347788865 779999999999998887664 9999999999866543
Q ss_pred C--------c-------h-------hhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC--CCCcHHH
Q 014492 263 E--------S-------R-------MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAA 318 (423)
Q Consensus 263 ~--------~-------~-------~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~--~~~~~~~ 318 (423)
. . . ...++..+|||...||||.++ ||+|+||+.+++-+++++.+.... .+++.+.
T Consensus 253 ~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiia-PGlRlG~it~~~~~l~ril~~ae~~t~~pSg~s 331 (472)
T KOG0634|consen 253 TYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIA-PGLRLGWITGNSLFLKRILDLAEVATSGPSGFS 331 (472)
T ss_pred ccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhc-CcceeEEeecCHHHHHHHhhhcceeecCccccc
Confidence 1 0 0 112344789999999999997 999999999999999988876653 3577788
Q ss_pred HHHHHHHhCC------hHHHHHHHHHHHHHHHHHHHHHcc-CCCC---eecCCCceEEEEEeC-------CCCC-HHHHH
Q 014492 319 EVAACAALQN------PIYLEKVKEALIKERERLFKLLKD-VPFL---NPYPSYSNFILCEVT-------SGMD-AKKLK 380 (423)
Q Consensus 319 ~~a~~~~l~~------~~~~~~~~~~~~~~~~~l~~~L~~-~~~~---~~~p~~~~~~~~~~~-------~~~~-~~~l~ 380 (423)
|..+.+.|+. .+|+.+.+..|.++++.+..+|.+ ++.. ...|.+|+|+|++++ +..+ .+++.
T Consensus 332 q~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~~~~~~~~i~q~~e~i 411 (472)
T KOG0634|consen 332 QGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYINFDTKKSINQIEEII 411 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEEecccccccccchHHHHHHH
Confidence 8888877775 268899999999999999999976 4433 246899999999997 4444 44444
Q ss_pred HH-HHhCCcEEEeCCCC------C-CCCeEEEEecChhhHHHHHHHHhhh
Q 014492 381 DD-LAKMGVMIRHYNNK------E-LKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 381 ~~-L~~~gI~v~~~~~~------~-~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.. +.++||.+..|..+ . ..-++|++++..+. ++|.++++++
T Consensus 412 ~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a~~-e~l~~g~~rf 460 (472)
T KOG0634|consen 412 FIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFAEP-EKLDEGIERF 460 (472)
T ss_pred HHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecCCH-HHHHHHHHHH
Confidence 44 45999999988762 1 12399999997664 7999999986
No 113
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=100.00 E-value=6.1e-31 Score=259.54 Aligned_cols=320 Identities=13% Similarity=0.154 Sum_probs=234.6
Q ss_pred CCCCeeEcCCCCC-CCCCCHHHHHHHhc-C-CCCCCCCC-c---c----hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492 93 KPEDIVKIDANEN-PYGPPPEVREALGQ-L-KFPYIYPD-P---E----SRRLRAALAKDSGLESDHILVGCGADELIDL 161 (423)
Q Consensus 93 ~~~~~i~l~~~~~-~~~~~~~v~~al~~-~-~~~~~Y~~-~---g----~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~ 161 (423)
.+.++|+|..++. .++++|++.+++.+ + .++.+|+. . | ..++|+++|+++|. +++++++|+++++..
T Consensus 36 ~g~~~i~~~~~~~lg~~~~~~v~~~~~~~~~~~~~~~~~s~~~~G~~~~~~~le~~ia~~~g~--~~~ii~~~~~~a~~~ 113 (393)
T TIGR01822 36 DGREVLNFCANNYLGLSSHPDLIQAAKDALDEHGFGMSSVRFICGTQDIHKELEAKIAAFLGT--EDTILYASCFDANGG 113 (393)
T ss_pred CCceEEEeeCCCccccCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhCC--CcEEEECchHHHHHH
Confidence 4578999999974 77888999888765 2 22234422 2 3 37899999999996 467777888899999
Q ss_pred HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc---C--CceEEEEcCCCCCcCcCCC
Q 014492 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---E--KPKCIFLTSPNNPDGSIIN 236 (423)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---~--~~~~i~l~~p~NPtG~~~~ 236 (423)
++.+++++||.|+++.|.|+.+...++..+.+.+.++ ..|++++++.+.+ . ++++|++++++||||.+.+
T Consensus 114 ~~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~-----~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~ 188 (393)
T TIGR01822 114 LFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYA-----NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAP 188 (393)
T ss_pred HHHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEeC-----CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCC
Confidence 9999999999999999999999888888888876654 4789999988863 2 7888888899999999999
Q ss_pred HHHHHHHHcC-CCEEEEccCCccccCCCc---hhhhhcc-CCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC
Q 014492 237 DEDLLKILEM-PILVVLDEAYTEFSGLES---RMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP 311 (423)
Q Consensus 237 ~~~l~~i~~~-~~~li~Deay~~~~~~~~---~~~~~~~-~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~ 311 (423)
.+++.++|+. |+++|+||+|.....+.. .....+. .+.+++++|+||.+ +|+|+||+++++++++.+.....+
T Consensus 189 l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l--~g~r~G~~~~~~~~~~~l~~~~~~ 266 (393)
T TIGR01822 189 LDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKAL--GGASGGFTTARKEVVELLRQRSRP 266 (393)
T ss_pred HHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHh--hCCCcEEEEeCHHHHHHHHHhCcc
Confidence 9999999997 999999999964322111 1111211 24569999999976 478999999999999988765433
Q ss_pred C----CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCC
Q 014492 312 Y----NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMG 387 (423)
Q Consensus 312 ~----~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~g 387 (423)
+ +.++..+.++.++++..+..++.+++++++++++.+.|++.+ +.+.++.+.++.+.+++..++.++++.|.++|
T Consensus 267 ~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~i~~~~~~~~~~l~~~L~~~g 345 (393)
T TIGR01822 267 YLFSNSLPPAVVGASIKVLEMLEASNELRDRLWANTRYFRERMEAAG-FDIKPADHPIIPVMLYDAVLAQRFARRLLEEG 345 (393)
T ss_pred ceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC-CCCCCCCCCEEEEEeCCHHHHHHHHHHHHHCC
Confidence 2 234555555666664333356778899999999999998775 34444455677777664456788999999889
Q ss_pred cEEEeCCC---CCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 388 VMIRHYNN---KELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 388 I~v~~~~~---~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
|.+..... +....++||+++...+.+++.+++++|
T Consensus 346 I~v~~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l 383 (393)
T TIGR01822 346 IYVTGFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAF 383 (393)
T ss_pred eeEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHH
Confidence 99974322 123457999986443334455544443
No 114
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=100.00 E-value=8.5e-31 Score=255.95 Aligned_cols=280 Identities=19% Similarity=0.189 Sum_probs=218.4
Q ss_pred hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHH
Q 014492 131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVE 208 (423)
Q Consensus 131 ~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~ 208 (423)
..++++.+|+++|++ .+++++|+++++..++.+++++||.|+++.+.|......++..|++++.+|.+ .++.+|++
T Consensus 53 ~~~~~e~lA~~~g~~--~~~i~~g~~~a~~~~~~~l~~~gd~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 130 (370)
T TIGR02539 53 IHDFLEDLAEFLGMD--EARVTHGAREGKFAVMHALCKEGDWVVLDGLAHYTSYVAAERAGLNVKEVPHTGHPEYKVDPE 130 (370)
T ss_pred HHHHHHHHHHHhCCC--ceEEECChHHHHHHHHHHhhCCCCEEEECCcccHHHHHHHHHcCCEEEEEecCCcccCCcCHH
Confidence 568899999999985 46678999999999999999999999999888654446778899999999964 35789999
Q ss_pred HHHHHhhc------CCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccC
Q 014492 209 LIADAVER------EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF 281 (423)
Q Consensus 209 ~l~~~i~~------~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~ 281 (423)
++++.+.+ .++++|++++|+||||.+.+.+++.++++. |+++|+||+|..+....... ..+..++++|+
T Consensus 131 ~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~~~~~----~~~~di~v~s~ 206 (370)
T TIGR02539 131 GYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMPVSAK----EIGADFIVGSG 206 (370)
T ss_pred HHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcCCCHH----HcCCCEEEeeC
Confidence 99999853 368899999999999999999999999987 99999999999653211111 22345778999
Q ss_pred hhhhcccCccccccccCHHHHHHHHHhcCCCCCcHH----------HHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHH
Q 014492 282 SKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVA----------AEVAACAALQN-PIYLEKVKEALIKERERLFKLL 350 (423)
Q Consensus 282 SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~~----------~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L 350 (423)
||.++ +|.|+||+++++++++.+.....+|+.+.+ .+.++..+++. .++++...+.++. ++++.+.|
T Consensus 207 sK~~~-~~g~~G~l~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~l~~~~~~~~~-~~~l~~~L 284 (370)
T TIGR02539 207 HKSMA-ASGPCGVLGMSEEWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPHVVERVKRWDEEVKK-TRWFVAEL 284 (370)
T ss_pred ccccc-CCCCEEEEEECHHHHhhhcccccCCccceeeeecccccccHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 99998 677899999999999999887776654333 55555666654 4555555555444 56899999
Q ss_pred ccCCCCe--ecCCCceEEEEEeCCC--------CCHHHHHHHHHhCCcE-EEeCCCCCCCCeEEEEe--cChhhHHHHHH
Q 014492 351 KDVPFLN--PYPSYSNFILCEVTSG--------MDAKKLKDDLAKMGVM-IRHYNNKELKGYVRVSV--GKPEHTDALME 417 (423)
Q Consensus 351 ~~~~~~~--~~p~~~~~~~~~~~~~--------~~~~~l~~~L~~~gI~-v~~~~~~~~~~~iRis~--~~~~~~~~l~~ 417 (423)
+++++.. +.|+.++|+++++|.. .+...+.+.|.++||. ++++ .++++||++ .+.++++++.+
T Consensus 285 ~~~g~~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e~GI~~ir~~----~~~~iRis~~~~t~e~i~~l~~ 360 (370)
T TIGR02539 285 EDIGFIQLGQKPKEHDLVKFETPGFHEIAQKHKRRGYFLYEELKKRGIHGIRSG----QTKYFKLSVYGLTKEQVEYVVD 360 (370)
T ss_pred HhCCcEEEccCCCcCceEEEECCchhHHhhhhccccHHHHHHHHhCCCccccCC----cceEEEEEecCCCHHHHHHHHH
Confidence 9987432 3578899999988621 1244688999999997 5643 257999998 77888888888
Q ss_pred HHhhh
Q 014492 418 CLMHL 422 (423)
Q Consensus 418 al~~l 422 (423)
+|+++
T Consensus 361 ~L~~~ 365 (370)
T TIGR02539 361 SFEEI 365 (370)
T ss_pred HHHHH
Confidence 87754
No 115
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=100.00 E-value=2.5e-30 Score=251.75 Aligned_cols=312 Identities=18% Similarity=0.120 Sum_probs=234.3
Q ss_pred CCCCCCHHHHHHHhcCCCCCCCCCcc--hHHHHHHHHHHhCCCC-CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCch
Q 014492 105 NPYGPPPEVREALGQLKFPYIYPDPE--SRRLRAALAKDSGLES-DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT 181 (423)
Q Consensus 105 ~~~~~~~~v~~al~~~~~~~~Y~~~g--~~~lr~~ia~~~g~~~-~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~ 181 (423)
.+.+.++.+.+++.+....++|+... .+++++.+++++|+++ +.+++++|+++++..++.+++.+||.|++..++|.
T Consensus 6 ~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl~~~~~~~ 85 (356)
T cd06451 6 GPSNVPPRVLKAMNRPMLGHRSPEFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLLEPGDKVLVGVNGVF 85 (356)
T ss_pred CCcCCCHHHHHHhCCCccCCCCHHHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhCCCCCEEEEecCCch
Confidence 45666789999997643335566543 6689999999999854 45788898899999999999999999999988776
Q ss_pred h--hHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCcc
Q 014492 182 M--YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTE 258 (423)
Q Consensus 182 ~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~ 258 (423)
. +...++..|++++.+|.+.++.+|++++++.+++.++++|++++|+||||.+++.+++.++++. |+++++|++|..
T Consensus 86 ~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~~~~ 165 (356)
T cd06451 86 GDRWADMAERYGADVDVVEKPWGEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNPLEGIGALAKKHDALLIVDAVSSL 165 (356)
T ss_pred hHHHHHHHHHhCCCeEEeecCCCCCCCHHHHHHHHhccCCCEEEEeccCCCcccccCHHHHHHHHHhcCCEEEEeeehhc
Confidence 4 5667788999999999876778999999999974489999999999999999999999999987 999999999863
Q ss_pred ccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHH--hc-------------------CCCCCcHH
Q 014492 259 FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR--AK-------------------QPYNVSVA 317 (423)
Q Consensus 259 ~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~--~~-------------------~~~~~~~~ 317 (423)
.. .... ....+..+++.|++|.++.+ .++||++.+++.++.+.. .. ...+.+..
T Consensus 166 g~---~~~~-~~~~~~d~~~~s~~K~l~~p-~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~ 240 (356)
T cd06451 166 GG---EPFR-MDEWGVDVAYTGSQKALGAP-PGLGPIAFSERALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVN 240 (356)
T ss_pred cC---cccc-ccccCccEEEecCchhccCC-CCcceeEECHHHHHHHHhcCCCCceeecHHHHHhhhcccCCCCCCChHH
Confidence 22 1111 11223346678899998743 468999999998887753 00 11123444
Q ss_pred HHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeecC-C--CceEEEEEeCCCCCHHHHHHHHHhC-CcEEE
Q 014492 318 AEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPYP-S--YSNFILCEVTSGMDAKKLKDDLAKM-GVMIR 391 (423)
Q Consensus 318 ~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p-~--~~~~~~~~~~~~~~~~~l~~~L~~~-gI~v~ 391 (423)
.+.++.++++. ...+++..++.+++++++.+.|+++++....+ . .+.++|+.++++.+..++++.|.++ ||.++
T Consensus 241 ~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~gI~~~ 320 (356)
T cd06451 241 LLYALREALDLILEEGLENRWARHRRLAKALREGLEALGLKLLAKPELRSPTVTAVLVPEGVDGDEVVRRLMKRYNIEIA 320 (356)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCcccCCCceEEEECCCCCCHHHHHHHHHHhCCEEEe
Confidence 45555555543 23456778888899999999998875322222 1 3345677777677899999999977 99999
Q ss_pred eCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 392 HYNNKELKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 392 ~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
++..+..++++|++++ +.++++++.++|+.
T Consensus 321 ~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~ 353 (356)
T cd06451 321 GGLGPTAGKVFRIGHMGEATREDVLGVLSALEE 353 (356)
T ss_pred cccccccCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence 8765445679999994 55667777776665
No 116
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=100.00 E-value=2.7e-30 Score=255.73 Aligned_cols=320 Identities=21% Similarity=0.219 Sum_probs=240.8
Q ss_pred CCCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCC-------C----cchHHHHHHHHHHhCCC-CCcEEEeCCHHHHHH
Q 014492 94 PEDIVKIDANENPYGPPPEVREALGQL-KFPYIYP-------D----PESRRLRAALAKDSGLE-SDHILVGCGADELID 160 (423)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~-------~----~g~~~lr~~ia~~~g~~-~~~i~~t~G~~~al~ 160 (423)
++++++|+.+... ++++.+.+++.+. ......+ . ...+++|+.+++++|.+ +++|++|+|+++++.
T Consensus 16 ~~~~~yld~~~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~ 94 (403)
T TIGR01979 16 GKPLVYLDSAATS-QKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASDEEIVFTRGTTESIN 94 (403)
T ss_pred CCceEEEeCcccc-CCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHH
Confidence 4567999987766 3567788888652 1111111 1 12458999999999997 689999999999999
Q ss_pred HHHHHh----cCCCCeEEEcCCCchh----hHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcC
Q 014492 161 LIMRCV----LDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDG 232 (423)
Q Consensus 161 ~~~~~l----~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG 232 (423)
+++.++ +++||+|+++++.|+. +...++..|++++.++.++++.+|++++++.+. ++++++++++|+||||
T Consensus 95 ~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~-~~~~lv~~~~~~~~tG 173 (403)
T TIGR01979 95 LVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDDDGTLDLDDLEKLLT-EKTKLVAITHVSNVLG 173 (403)
T ss_pred HHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecCCCCCCCHHHHHHHhc-cCCeEEEEEccccccc
Confidence 998875 5789999999998764 345566789999999987777899999999996 6899999999999999
Q ss_pred cCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhc--
Q 014492 233 SIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK-- 309 (423)
Q Consensus 233 ~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~-- 309 (423)
.++|.+++.++++. |+++|+|++|+..... . .+...+.++++.|++|.+|.+| +|++++++++++.+....
T Consensus 174 ~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~---~-~~~~~~~d~~~~s~~K~~gp~G--~g~l~~~~~~~~~~~~~~~g 247 (403)
T TIGR01979 174 TVNPVEEIAKLAHQVGAKVLVDGAQAVPHMP---V-DVQALDCDFYVFSGHKMYGPTG--IGVLYGKEELLEQMPPFLGG 247 (403)
T ss_pred ccCCHHHHHHHHHHcCCEEEEEchhhcCccc---c-CccccCCCEEEEecccccCCCC--ceEEEEchHHHhcCCCeecC
Confidence 99999999999987 9999999999743321 1 1223345689999999888666 899999888776653110
Q ss_pred ---------------------CCCCCcHHHHHHHHHHhCCh-H-HHHHHHHHHHHHHHHHHHHHccCCCCeec-CC----
Q 014492 310 ---------------------QPYNVSVAAEVAACAALQNP-I-YLEKVKEALIKERERLFKLLKDVPFLNPY-PS---- 361 (423)
Q Consensus 310 ---------------------~~~~~~~~~~~a~~~~l~~~-~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~---- 361 (423)
...+.+.....++..+++.. + ..++.+++..+.++++.+.|++++++.+. |.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~~ 327 (403)
T TIGR01979 248 GEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEIPGLRIYGPRDAED 327 (403)
T ss_pred CCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccc
Confidence 01134555666666666431 1 25677888999999999999888766654 32
Q ss_pred CceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC--------CCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492 362 YSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN--------KELKGYVRVSVG---KPEHTDALMECLMHL 422 (423)
Q Consensus 362 ~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~--------~~~~~~iRis~~---~~~~~~~l~~al~~l 422 (423)
.+.++.+.++ +.+..++.+.|.++||.++.+.. .+.++++|||++ +.+|++++.++|+.+
T Consensus 328 ~~~~v~~~~~-~~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t~~di~~l~~~l~~~ 398 (403)
T TIGR01979 328 RGGIISFNVE-GVHPHDVGTILDEEGIAVRSGHHCAQPLMRRFGVPATCRASFYIYNTEEDIDALVEALKKV 398 (403)
T ss_pred cCceEEEEeC-CcCHHHHHHHHhhCCEEEcchhhhhHHHHHHhCCCCEEEEEeccCCCHHHHHHHHHHHHHH
Confidence 2667777876 46678899989999999987642 233679999987 677888888888754
No 117
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=100.00 E-value=4.8e-30 Score=252.43 Aligned_cols=318 Identities=19% Similarity=0.166 Sum_probs=234.2
Q ss_pred CCCCeeEcCCCCC-CCCCCHHHHHHHhcC-C-CCC---CC-----CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492 93 KPEDIVKIDANEN-PYGPPPEVREALGQL-K-FPY---IY-----PDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (423)
Q Consensus 93 ~~~~~i~l~~~~~-~~~~~~~v~~al~~~-~-~~~---~Y-----~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~ 161 (423)
.++++|||..+++ .+.++|++.+++.+. . +.. .| ..+-..+++++++++++. ++.|++++|+ +++..
T Consensus 37 ~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~-~~~i~~~~g~-~~~~~ 114 (385)
T PRK05958 37 DGRRMLNFASNDYLGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFGA-ERALLFSSGY-AANLA 114 (385)
T ss_pred CCceEEEeeCCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC-CcEEEECcHH-HHHHH
Confidence 5678999999875 345678899888762 1 111 11 122357899999999983 5566666655 55556
Q ss_pred HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcC--CceEEEEcCCCCCcCcCCCHHH
Q 014492 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE--KPKCIFLTSPNNPDGSIINDED 239 (423)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~--~~~~i~l~~p~NPtG~~~~~~~ 239 (423)
++..++++||.|+++.|+|+.+...++..|++++.++. .|++.+++.+++. ++.++++.+++||||...+.++
T Consensus 115 ~l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~l~~ 189 (385)
T PRK05958 115 VLTALAGKGDLIVSDKLNHASLIDGARLSRARVRRYPH-----NDVDALEALLAKWRAGRALIVTESVFSMDGDLAPLAE 189 (385)
T ss_pred HHHHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEeCC-----CCHHHHHHHHHhccCCCeEEEEEecccCCCCcCCHHH
Confidence 77788999999999999999999888889999998874 3789999988643 3555665689999999999999
Q ss_pred HHHHHcC-CCEEEEccCCccccCC--Cc-hhh--hhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCC-
Q 014492 240 LLKILEM-PILVVLDEAYTEFSGL--ES-RME--WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY- 312 (423)
Q Consensus 240 l~~i~~~-~~~li~Deay~~~~~~--~~-~~~--~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~- 312 (423)
+.++|+. |+++|+||+|..+..+ +. ... .+...++++++.|+||.+|++| ||+++++++++.+.+....+
T Consensus 190 i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G---g~~~~~~~~~~~~~~~~~~~~ 266 (385)
T PRK05958 190 LVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSSG---AAVLGSETLIDYLINRARPFI 266 (385)
T ss_pred HHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcccCC---cEEEcCHHHHHHHHHhCccce
Confidence 9999997 9999999999765332 11 111 2334567899999999998777 99999999888876544332
Q ss_pred ---CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcE
Q 014492 313 ---NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVM 389 (423)
Q Consensus 313 ---~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~ 389 (423)
+.++..+.++.++++..+..++..+++.++++++.+.|++++ +.+.++.++|+++.+++..++.++.+.|.++||.
T Consensus 267 ~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~ 345 (385)
T PRK05958 267 FTTALPPAQAAAARAALRILRREPERRERLAALIARLRAGLRALG-FQLMDSQSAIQPLIVGDNERALALAAALQEQGFW 345 (385)
T ss_pred ecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC-CCcCCCCCCEEEEEeCCHHHHHHHHHHHHHCCce
Confidence 345566666667775422225677889999999999998875 3445667888999987545677899999999999
Q ss_pred EEeCCCC---CCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 390 IRHYNNK---ELKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 390 v~~~~~~---~~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
++++..+ .+++++||+++ +.++++++.++|+.
T Consensus 346 v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~ 383 (385)
T PRK05958 346 VGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAE 383 (385)
T ss_pred EecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHh
Confidence 9875432 23579999997 55555555555543
No 118
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=100.00 E-value=1.7e-30 Score=257.39 Aligned_cols=317 Identities=20% Similarity=0.191 Sum_probs=232.7
Q ss_pred CCeeEcCCC-CCCCCCCHHHHHHHhc-CC-CC-------CCCCCc-chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492 95 EDIVKIDAN-ENPYGPPPEVREALGQ-LK-FP-------YIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (423)
Q Consensus 95 ~~~i~l~~~-~~~~~~~~~v~~al~~-~~-~~-------~~Y~~~-g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~ 163 (423)
++.+.|+++ +++++++|.+++++.+ +. ++ ..|+.. ...+|++++++++|. ++.|++++|+ +++..++
T Consensus 46 ~~~~~~~sn~yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g~-~~~i~~~sG~-~a~~~~i 123 (410)
T PRK13392 46 RRVTIWCSNDYLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHGK-ESALLFTSGY-VSNDAAL 123 (410)
T ss_pred ceEEEEECCCccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhCC-CCEEEECcHH-HHHHHHH
Confidence 345666554 8889999999988866 21 21 123443 467899999999995 5788888886 5666666
Q ss_pred HHhcC--CCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhh---cCCceEEEEcCCCCCcCcCCCHH
Q 014492 164 RCVLD--PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE---REKPKCIFLTSPNNPDGSIINDE 238 (423)
Q Consensus 164 ~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~---~~~~~~i~l~~p~NPtG~~~~~~ 238 (423)
..+.. +|+.|+++...|..+...++..|+++..++.+ |.+.+++.+. .+++++|++++|+||||.+++.+
T Consensus 124 ~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~~-----d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~l~ 198 (410)
T PRK13392 124 STLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRHN-----DLADLEEQLASVDPDRPKLIAFESVYSMDGDIAPIE 198 (410)
T ss_pred HHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeCC-----CHHHHHHHHHhccCCCCEEEEEeCCCCCCcccccHH
Confidence 65643 88988887777877777778889988777531 4445555443 25789999999999999999999
Q ss_pred HHHHHHcC-CCEEEEccCCccccCCCc--hh-hhhccCCc-EEEEccChhhhcccCccccccccCHHHHHHHHHhcCCC-
Q 014492 239 DLLKILEM-PILVVLDEAYTEFSGLES--RM-EWVKKHDN-LIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY- 312 (423)
Q Consensus 239 ~l~~i~~~-~~~li~Deay~~~~~~~~--~~-~~~~~~~~-~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~- 312 (423)
++.++++. ++++|+||+|....+++. .. ...+..++ .++++||||.||++| ||+++++++++.+.+...++
T Consensus 199 ~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~G---G~~~~~~~~~~~l~~~~~~~~ 275 (410)
T PRK13392 199 AICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCLG---GYIAASADLIDFVRSFAPGFI 275 (410)
T ss_pred HHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhccc---chhhcCHHHHHHHHHhCcchh
Confidence 99999987 999999999984332221 11 11111122 488899999999998 99999999999888776543
Q ss_pred ---CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHH-hCCc
Q 014492 313 ---NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-KMGV 388 (423)
Q Consensus 313 ---~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~-~~gI 388 (423)
..+++.+.++.++|+..+.....+++++++++++.+.|++++ +.+.++.++|+.+.++...+..++.+.|+ ++||
T Consensus 276 ~s~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~i~~~~~~~~~~~~~~L~~~~GI 354 (410)
T PRK13392 276 FTTALPPAVAAGATAAIRHLKTSQTERDAHQDRVAALKAKLNANG-IPVMPSPSHIVPVMVGDPTLCKAISDRLMSEHGI 354 (410)
T ss_pred ccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC-CCCCCCCCCEEEEEeCCHHHHHHHHHHHHHhCCE
Confidence 345677888888887644445566788999999999999875 45556778887777653334568899886 7899
Q ss_pred EEEeCCC---CCCCCeEEEEe---cChhhHHHHHHHHhhh
Q 014492 389 MIRHYNN---KELKGYVRVSV---GKPEHTDALMECLMHL 422 (423)
Q Consensus 389 ~v~~~~~---~~~~~~iRis~---~~~~~~~~l~~al~~l 422 (423)
.+++... +.+..++||++ .+.++++++.++|+++
T Consensus 355 ~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~~ 394 (410)
T PRK13392 355 YIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVAI 394 (410)
T ss_pred EEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHH
Confidence 9997654 23457999997 5777788888887654
No 119
>PLN02721 threonine aldolase
Probab=99.98 E-value=3.6e-30 Score=250.35 Aligned_cols=311 Identities=21% Similarity=0.217 Sum_probs=218.8
Q ss_pred CeeEcCCCCCCCCCCHHHHHHHhcC--CCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcC-CCCe
Q 014492 96 DIVKIDANENPYGPPPEVREALGQL--KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLD-PGDK 172 (423)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~--~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~-~gd~ 172 (423)
.+++|+.|.+++ +++.+.+++.+. .....|+++...+||+++++++|.+. .+++++| ++++..++..+++ +||.
T Consensus 6 ~~~~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~-~~~~~~G-s~a~~~~l~~~~~~~gd~ 82 (353)
T PLN02721 6 RVVDLRSDTVTK-PTDAMRAAMANAEVDDDVLGYDPTALRLEEEMAKIFGKEA-ALFVPSG-TMGNLISVLVHCDVRGSE 82 (353)
T ss_pred hhhhhhcccccC-CCHHHHHHHHhccCCCcccCCCHHHHHHHHHHHHHhCCce-eEEecCc-cHHHHHHHHHHccCCCCe
Confidence 468999999986 678899998863 33334455557899999999999753 4445555 4455577777777 9999
Q ss_pred EEEcCCCch-hhHH--HHHHCCCeEEEecCCCCCCCCHHHHHHHhhc------CCceEEEEcC-CCCCcCcCCCHHHHHH
Q 014492 173 IVDCPPTFT-MYEF--DAAVNGAAVVKVPRKSDFSLNVELIADAVER------EKPKCIFLTS-PNNPDGSIINDEDLLK 242 (423)
Q Consensus 173 Vl~~~p~y~-~~~~--~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~------~~~~~i~l~~-p~NPtG~~~~~~~l~~ 242 (423)
|++++|+|. .+.. .+...|++++.+|.++++.+|++++++.+++ +++++|++++ +|||||.+++.+++++
T Consensus 83 Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~ 162 (353)
T PLN02721 83 VILGDNSHIHLYENGGISTLGGVHPRTVKNNEDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDK 162 (353)
T ss_pred EEEcCccceehhcccchhhhcCceeEecCCCcCCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHH
Confidence 999999985 3332 5677899999999777778999999999963 4789999986 5889999999776655
Q ss_pred H---HcC-CCEEEEccCCccccC---CCchhhhhccCCcEEEEccChhhhcccCccccc-cccCHHHHHHHHHhcCCCC-
Q 014492 243 I---LEM-PILVVLDEAYTEFSG---LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGY-GAFPLSIIEYLWRAKQPYN- 313 (423)
Q Consensus 243 i---~~~-~~~li~Deay~~~~~---~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~-i~~~~~~~~~l~~~~~~~~- 313 (423)
| |+. |+++|+||+|..... +..........+ .++.|+||.++. ++|+ ++.++++++.+......+.
T Consensus 163 l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~d--~~~~s~sK~l~~---~~G~~~~~~~~~~~~~~~~~~~~~~ 237 (353)
T PLN02721 163 VGELAKRHGLKLHIDGARIFNASVALGVPVHRLVKAAD--SVSVCLSKGLGA---PVGSVIVGSKSFIRKAKRLRKTLGG 237 (353)
T ss_pred HHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHhhhCC--EEEEecccccCC---ceeeEEecCHHHHHhHHHHHHhcCC
Confidence 5 444 999999999863321 111111121223 445579998763 3565 6678999888766554332
Q ss_pred -CcHHHHHH--HHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCe--ecCCCceEEEEEeCCC--CCHHHHHHHHHhC
Q 014492 314 -VSVAAEVA--ACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLN--PYPSYSNFILCEVTSG--MDAKKLKDDLAKM 386 (423)
Q Consensus 314 -~~~~~~~a--~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~--~~p~~~~~~~~~~~~~--~~~~~l~~~L~~~ 386 (423)
.+...+.+ +...+ .++.++.. +..++++++.+.|++++++. +.+..++|+|++++++ .+...+++.|.++
T Consensus 238 ~~~~~~~~~~~~~~~l--~~~~~~~~-~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 314 (353)
T PLN02721 238 GMRQVGVLAAAALVAL--QENVPKLE-DDHKKAKLLAEGLNQIKGLRVNVAAVETNIVYFDITDGSRITAEKLCKSLEEH 314 (353)
T ss_pred CeehhHHHHHHHHHHH--HHHHHHHH-HHHHHHHHHHHHHHhCCCcEEecCCccceEEEEEccCCccccHHHHHHHHHhC
Confidence 22222222 22233 23344333 33567889999999886553 3455678999999753 5788999999999
Q ss_pred CcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 387 GVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 387 gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
||.++++. .+++|++++ +.++++++.++|++
T Consensus 315 gi~v~~~~----~~~lR~~~~~~~~~~~i~~~~~~l~~ 348 (353)
T PLN02721 315 GVLLMPGN----SSRIRVVTHHQISDSDVQYTLSCFQQ 348 (353)
T ss_pred CcEEecCC----CceEEEEecCcCCHHHHHHHHHHHHH
Confidence 99999875 579999997 66666667666654
No 120
>PRK02948 cysteine desulfurase; Provisional
Probab=99.98 E-value=1e-30 Score=256.86 Aligned_cols=316 Identities=16% Similarity=0.144 Sum_probs=234.5
Q ss_pred eEcCCCCCCCCCCHHHHHHHhcC-C-C----CCCCCC-----cchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh
Q 014492 98 VKIDANENPYGPPPEVREALGQL-K-F----PYIYPD-----PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV 166 (423)
Q Consensus 98 i~l~~~~~~~~~~~~v~~al~~~-~-~----~~~Y~~-----~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l 166 (423)
++|+.+.... +++.+++++.+. . . ...|.. .-.+++|+.+++++|.++++|++++|+++++..++..+
T Consensus 2 ~yld~a~~~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~ 80 (381)
T PRK02948 2 IYLDYAATTP-MSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSL 80 (381)
T ss_pred EeccCCCCCC-CCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHH
Confidence 5777765543 567888888652 1 1 011110 11457899999999999999999999999999988877
Q ss_pred c----CCCCeEEEcCCCchhh---HHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHH
Q 014492 167 L----DPGDKIVDCPPTFTMY---EFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239 (423)
Q Consensus 167 ~----~~gd~Vl~~~p~y~~~---~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~ 239 (423)
+ ++||.|++....|+.+ ...++..|++++.+|.+.++.+|++++++.+. +++++|++++|+||||.++|.++
T Consensus 81 ~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~-~~~~lv~~~~~~n~tG~~~~~~~ 159 (381)
T PRK02948 81 LNALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDKSGLIRLVDLERAIT-PDTVLASIQHANSEIGTIQPIAE 159 (381)
T ss_pred HHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCCCCCCCHHHHHHhcC-CCCEEEEEECCcCCcEeehhHHH
Confidence 5 5689999988777644 34456689999999987777899999999986 68899999999999999999999
Q ss_pred HHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHH-HHHHHH------hcCC
Q 014492 240 LLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI-IEYLWR------AKQP 311 (423)
Q Consensus 240 l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~-~~~l~~------~~~~ 311 (423)
+.++++. |+++++|+++.... .+. .+...+.++++.|++|.+|.+| +|+++.++++ ...+.. ...+
T Consensus 160 I~~l~~~~~~~vivD~~~~~g~-~~~---~~~~~~~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~ 233 (381)
T PRK02948 160 IGALLKKYNVLFHSDCVQTFGK-LPI---DVFEMGIDSLSVSAHKIYGPKG--VGAVYINPQVRWKPVFPGTTHEKGFRP 233 (381)
T ss_pred HHHHHHHcCCEEEEEChhhccc-ccc---CcccCCCCEEEecHHhcCCCCc--EEEEEEcCCCCCCCcccCCCCCCCcCC
Confidence 9999987 99999997765321 111 1224466788999999998888 7888877654 111110 0135
Q ss_pred CCCcHHHHHHHHHHhCCh-HHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCce-----EEEEEeCCCCCHHHHHHHHHh
Q 014492 312 YNVSVAAEVAACAALQNP-IYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSN-----FILCEVTSGMDAKKLKDDLAK 385 (423)
Q Consensus 312 ~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~-----~~~~~~~~~~~~~~l~~~L~~ 385 (423)
++++.+++.++.++++.. ++.++.+++++++++++.+.|+++++........+ .+.+.++ +.+..++...|.+
T Consensus 234 ~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~ 312 (381)
T PRK02948 234 GTVNVPGIAAFLTAAENILKNMQEESLRFKELRSYFLEQIQTLPLPIEVEGHSTSCLPHIIGVTIK-GIEGQYTMLECNR 312 (381)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEeCCCccCcCCEEEEEeC-CCCHHHHHHhccc
Confidence 678899999999888763 67888899999999999999998864222111122 2333444 5677888888889
Q ss_pred CCcEEEeCCCC-------------------CCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492 386 MGVMIRHYNNK-------------------ELKGYVRVSVG---KPEHTDALMECLMHL 422 (423)
Q Consensus 386 ~gI~v~~~~~~-------------------~~~~~iRis~~---~~~~~~~l~~al~~l 422 (423)
+||.++.+... ...+++|||++ +.+|++++.++|+.+
T Consensus 313 ~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~ 371 (381)
T PRK02948 313 RGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETI 371 (381)
T ss_pred CCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHH
Confidence 99999976530 12479999998 788888888888753
No 121
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.98 E-value=9.1e-30 Score=253.04 Aligned_cols=335 Identities=16% Similarity=0.143 Sum_probs=239.5
Q ss_pred CchHHHHHHhCCCCCCeeEcCCCCC--CCCCCH---HHHHHHhc-C-CCCCCC-CCcchHHHHHHHHHHhCCCCCcEEEe
Q 014492 81 LPFEVLSIQLGRKPEDIVKIDANEN--PYGPPP---EVREALGQ-L-KFPYIY-PDPESRRLRAALAKDSGLESDHILVG 152 (423)
Q Consensus 81 ~~~~~~~~~~~~~~~~~i~l~~~~~--~~~~~~---~v~~al~~-~-~~~~~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t 152 (423)
...+..++++...+.++|+|..+++ ++.++. .+.+++.+ + .....| +..+..+||++++++++. +++++|
T Consensus 22 ~~~~~~~~~l~~~g~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~g~~~Y~~~~g~~~Lreaia~~~~~--~~vv~t 99 (460)
T PRK13238 22 TTREERERALAEAGYNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMRGDEAYAGSRSYYRLEDAVKDIFGY--PYTIPT 99 (460)
T ss_pred cCHHHHHHHHHHcCCCEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHhCCcccCCCCCHHHHHHHHHHHhCC--CcEEEC
Confidence 3455566667677788999999998 677655 45555443 2 222568 566899999999999985 579999
Q ss_pred CCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC--------CCC--CCHHHHHHHhhc---CCc
Q 014492 153 CGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--------DFS--LNVELIADAVER---EKP 219 (423)
Q Consensus 153 ~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--------~~~--~d~~~l~~~i~~---~~~ 219 (423)
+|+++++.+++.++++||| |++++|.|..|....+..|++++.++.+. +|. +|+++|++.+.+ +++
T Consensus 100 ~ggt~A~~~~~~all~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~~~t 178 (460)
T PRK13238 100 HQGRAAEQILFPVLIKKGD-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGAENV 178 (460)
T ss_pred CCHHHHHHHHHHHhCCCCC-EEccCCcccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhcCCCce
Confidence 9999999999999999999 99999999999988899999999999642 344 999999999974 369
Q ss_pred eEEEEcCCCCCcC-cCCCHHHHHHHHc---C-CCEEEEccCCcc--ccCCCc---hhhhhccCCcEEEEccChhhhcccC
Q 014492 220 KCIFLTSPNNPDG-SIINDEDLLKILE---M-PILVVLDEAYTE--FSGLES---RMEWVKKHDNLIVLRTFSKRAGLAG 289 (423)
Q Consensus 220 ~~i~l~~p~NPtG-~~~~~~~l~~i~~---~-~~~li~Deay~~--~~~~~~---~~~~~~~~~~~i~i~S~SK~~g~~G 289 (423)
++|++++|+|||| .+++.+++++|++ . |++||+|+++.. ..+... ........+-...++|++|.+.+.|
T Consensus 179 k~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg 258 (460)
T PRK13238 179 PFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSA 258 (460)
T ss_pred eEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEec
Confidence 9999999999998 9999887666655 3 999999997742 111100 0000000011234466677766667
Q ss_pred cccc------ccccC-HHHHHHHHHhcC------CCC-CcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHcc
Q 014492 290 LRVG------YGAFP-LSIIEYLWRAKQ------PYN-VSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKD 352 (423)
Q Consensus 290 ~R~G------~i~~~-~~~~~~l~~~~~------~~~-~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~ 352 (423)
+|.| +++++ +++++++..... .++ .+...|.|+..+|.+ .+++..+ .+++++|.+.|++
T Consensus 259 ~K~g~~~~GG~i~~~d~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~~~~~~~~----~~~~~~l~~~L~~ 334 (460)
T PRK13238 259 KKDAMVNIGGLLCFRDEDLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMDEDYLAYR----IGQVEYLGEGLEE 334 (460)
T ss_pred ccCCCCcceeEEEcChHHHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhhChHHHHHH----HHHHHHHHHHHHH
Confidence 6653 55666 578888876631 123 344456777666643 2333333 3357899999988
Q ss_pred CCCCeecCCCceEEEEEeCC--------CCCHHHHHHHHH-hCCcEEEeCCC-------CC------CCCeEEEEec---
Q 014492 353 VPFLNPYPSYSNFILCEVTS--------GMDAKKLKDDLA-KMGVMIRHYNN-------KE------LKGYVRVSVG--- 407 (423)
Q Consensus 353 ~~~~~~~p~~~~~~~~~~~~--------~~~~~~l~~~L~-~~gI~v~~~~~-------~~------~~~~iRis~~--- 407 (423)
.++-.+.|.+|.|+++++.+ +..+.+++..|. +.||.+.+++. .. ....+|+++.
T Consensus 335 ~G~~~~~p~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~rr~ 414 (460)
T PRK13238 335 AGVPIQTPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIPRRV 414 (460)
T ss_pred CCCCeEccCCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEeccccc
Confidence 87656678999999998852 124677888876 89999987653 11 1479999986
Q ss_pred -ChhhHHHHHHHHhhh
Q 014492 408 -KPEHTDALMECLMHL 422 (423)
Q Consensus 408 -~~~~~~~l~~al~~l 422 (423)
+.++++.+.++|+.+
T Consensus 415 ~~~~~~~~~~~~l~~~ 430 (460)
T PRK13238 415 YTQSHMDYVAEALKAV 430 (460)
T ss_pred CCHHHHHHHHHHHHHH
Confidence 455667777777654
No 122
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.98 E-value=5.1e-30 Score=249.98 Aligned_cols=304 Identities=20% Similarity=0.224 Sum_probs=225.2
Q ss_pred CCCHHHHHHHhcCCCCC--------CC---CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEc
Q 014492 108 GPPPEVREALGQLKFPY--------IY---PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDC 176 (423)
Q Consensus 108 ~~~~~v~~al~~~~~~~--------~Y---~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~ 176 (423)
+..+++.+++.+...+. .. .++...++++++++++|+ +++++|+|+++++..++.+++++||+|+++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~--~~i~~~~g~t~al~~~l~~~~~~gd~Vl~~ 89 (361)
T cd06452 12 RLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGM--DEARVTPGAREGKFAVMHSLCEKGDWVVVD 89 (361)
T ss_pred CCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHcCC--ceEEEeCCHHHHHHHHHHHhcCCCCEEEEc
Confidence 34577778877642111 11 123467999999999998 789999999999999999999999999999
Q ss_pred CCCchhhHHHHHHCCCeEEEecCCCC--CCCCHHHHHHHhhc------CCceEEEEcCCCCCcCcCCCHHHHHHHHcC-C
Q 014492 177 PPTFTMYEFDAAVNGAAVVKVPRKSD--FSLNVELIADAVER------EKPKCIFLTSPNNPDGSIINDEDLLKILEM-P 247 (423)
Q Consensus 177 ~p~y~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~------~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~ 247 (423)
.++|......++..|++++.++.+.+ +.+|++++++.+.+ .++++|++++|+||||.+.+.+++.++++. |
T Consensus 90 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~ 169 (361)
T cd06452 90 GLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYG 169 (361)
T ss_pred CCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHHcC
Confidence 99887666678889999999997643 58999999998863 378999999999999999999999999987 9
Q ss_pred CEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCcH----------H
Q 014492 248 ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSV----------A 317 (423)
Q Consensus 248 ~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~----------~ 317 (423)
+++|+|++|........ ....+..++++|+||.++ +|.|+||+++++++++++.+...+|+.+. .
T Consensus 170 ~~vivD~a~~~g~~~~~----~~~~~~d~~~~s~~K~l~-~~~~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 244 (361)
T cd06452 170 VPLLLNGAYTVGRMPVS----GKELGADFIVGSGHKSMA-ASAPIGVLATTEEWADIVFRTSQMFKIKEVELLGCTLRGA 244 (361)
T ss_pred CeEEEECCcccCCcCCC----HHHcCCCEEEecCCcccc-CCCCeEEEEECHHHHHHHhccccccccceeeeeccccCch
Confidence 99999999984321111 112345699999999997 56699999999999999877665443321 1
Q ss_pred HHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeec---CCCceEEEEEeCC--------CCCHHHHHHHHHh
Q 014492 318 AEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPY---PSYSNFILCEVTS--------GMDAKKLKDDLAK 385 (423)
Q Consensus 318 ~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~---p~~~~~~~~~~~~--------~~~~~~l~~~L~~ 385 (423)
.+.++.+++.. .++++...+. .++++++.+.|++++++.+. ++..+|+.++.+. .....++.+.|++
T Consensus 245 ~~~~~~~al~~~~~~~~~~~~~-~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 323 (361)
T cd06452 245 PLVTLMASFPHVKERVKRWDEE-VEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETPSFDEIAKKHKRRGYFLYSELKK 323 (361)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcCCcchhhhhccccchhHHHHHHH
Confidence 23333333322 2333333333 34557899999998656653 5667888887751 1123368999999
Q ss_pred CCcEEEeCCCCCCCCeEEEEe--cChhhHHHHHHHHhhh
Q 014492 386 MGVMIRHYNNKELKGYVRVSV--GKPEHTDALMECLMHL 422 (423)
Q Consensus 386 ~gI~v~~~~~~~~~~~iRis~--~~~~~~~~l~~al~~l 422 (423)
+||.+.. ....+++|++. .+.++++.+.++|+.+
T Consensus 324 ~gI~~~~---~~~~~~~ri~~~g~~~e~~~~l~~al~~~ 359 (361)
T cd06452 324 RGIHGIK---PGLTRYFKLSTYGLTWEQVEYVVDAFKEI 359 (361)
T ss_pred cCceEEc---CCCceEEEEEecCCCHHHHHHHHHHHHHH
Confidence 9998633 23456899999 6888899999998864
No 123
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.98 E-value=4.5e-30 Score=248.18 Aligned_cols=305 Identities=20% Similarity=0.215 Sum_probs=225.0
Q ss_pred CCCCCCCCHHHHHHHhcC-CCCCCC-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCc
Q 014492 103 NENPYGPPPEVREALGQL-KFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF 180 (423)
Q Consensus 103 ~~~~~~~~~~v~~al~~~-~~~~~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y 180 (423)
.+++++++|.+++++.+. .....| ++....++++.+++++| ++++++++|+++++..++++++++||.|+++.|+|
T Consensus 4 ~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~~g--~~~~~~~~~gt~a~~~~~~~l~~~gd~v~~~~~~~ 81 (338)
T cd06502 4 SDTVTGPTPEMLEAMAAANVGDDVYGEDPTTAKLEARAAELFG--KEAALFVPSGTAANQLALAAHTQPGGSVICHETAH 81 (338)
T ss_pred cccCCCCCHHHHHHHHhcccCCcccCCCHHHHHHHHHHHHHhC--CCeEEEecCchHHHHHHHHHhcCCCCeEEEecCcc
Confidence 478899999999999873 222345 66678899999999999 55677777778999999999999999999999998
Q ss_pred hhhHH---HHHHCCCeEEEecCCCCCCCCHHHHHHHhhc------CCceEEEEcCCCCCcCcCCCHHHHHHHHcC----C
Q 014492 181 TMYEF---DAAVNGAAVVKVPRKSDFSLNVELIADAVER------EKPKCIFLTSPNNPDGSIINDEDLLKILEM----P 247 (423)
Q Consensus 181 ~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~------~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~ 247 (423)
..+.. .++..|++++.++.+. +.+|++++++++.+ .++++|++++|+|| |.+++.+++++|++. |
T Consensus 82 ~~~~~~~~~~~~~g~~~~~v~~~~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~~~~~~~~ 159 (338)
T cd06502 82 IYTDEAGAPEFLSGVKLLPVPGEN-GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAISALAKENG 159 (338)
T ss_pred eeeecCCcHHHHcCceEEeecCCC-CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHHHHHHHHcC
Confidence 65332 3455899999999754 68999999999863 27899999999997 667788887777653 8
Q ss_pred CEEEEccCCcccc--CCCchhhhhccCCcEEEEccChhhhcccCccccc-cccCHHHHHHHHHhcC----CCCCcHHHHH
Q 014492 248 ILVVLDEAYTEFS--GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGY-GAFPLSIIEYLWRAKQ----PYNVSVAAEV 320 (423)
Q Consensus 248 ~~li~Deay~~~~--~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~-i~~~~~~~~~l~~~~~----~~~~~~~~~~ 320 (423)
+++|+||+|..+. ..+........ +..+++.|+||.||++| |+ ++.++++++.+..... .++.+.+.+.
T Consensus 160 ~~livDea~~~~~~~~~~~~~~~~~~-~~d~~~~s~sK~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (338)
T cd06502 160 LPLHLDGARLANAAAALGVALKTYKS-GVDSVSFCLSKGGGAPV---GAVVVGNRDFIARARRRRKQAGGGMRQSGFLAA 235 (338)
T ss_pred CeEeechHHHHHHHHhcCCCHHHHHh-cCCEEEEeccccCCCcc---ceEEECCHHHHHHHHHHHHHhCCChhhHHHHHH
Confidence 9999999986442 11112222212 22356789999999887 54 5578899888876542 2456777888
Q ss_pred HHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCC-CCHHHHHHHHH---hCCcEEEeCCCC
Q 014492 321 AACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSG-MDAKKLKDDLA---KMGVMIRHYNNK 396 (423)
Q Consensus 321 a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~-~~~~~l~~~L~---~~gI~v~~~~~~ 396 (423)
++..+|+...+. +..+++.++++++.+.|+++++ .+.++.++|+.++++.+ .....+.+.+. ++|+.+.+..
T Consensus 236 a~~~~L~~~~~~-~~~~~~~~~~~~l~~~L~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~l~~~~~~gi~~~~~~-- 311 (338)
T cd06502 236 AGLAALENDLWL-RRLRHDHEMARRLAEALEELGG-LESEVQTNIVLLDPVEANAVFVELSKEAIERRGEGVLFYAWG-- 311 (338)
T ss_pred HHHHHhcCchHH-HHHHHHHHHHHHHHHHHHhcCC-CcccccCCeEEEecCCccHHHHHHHHHHHHhhhCCEEEEecC--
Confidence 888888775553 4557778888999999998875 55677889988887522 11223344443 6799998764
Q ss_pred CCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 397 ELKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 397 ~~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
.+++||+++ +.++.+++.++++.
T Consensus 312 --~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 312 --EGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred --CCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 289999998 56566666665543
No 124
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.98 E-value=7.8e-30 Score=252.51 Aligned_cols=319 Identities=18% Similarity=0.188 Sum_probs=239.8
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhcC-CCCC------CCC-C----cchHHHHHHHHHHhCC-CCCcEEEeCCHHHHHHH
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQL-KFPY------IYP-D----PESRRLRAALAKDSGL-ESDHILVGCGADELIDL 161 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~------~Y~-~----~g~~~lr~~ia~~~g~-~~~~i~~t~G~~~al~~ 161 (423)
.++++|+.+.... .++.+++++.+. .... .|. . ...+++|+++++++|. ++++|++|+|++++++.
T Consensus 22 ~~~iYld~a~~~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~l~~ 100 (406)
T PRK09295 22 LPLAYLDSAASAQ-KPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAEELVFVRGTTEGINL 100 (406)
T ss_pred CceEEEeCccccc-CCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHH
Confidence 3579999876543 567788887652 1101 111 0 1145899999999997 67899999999999999
Q ss_pred HHHH----hcCCCCeEEEcCCCch----hhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCc
Q 014492 162 IMRC----VLDPGDKIVDCPPTFT----MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS 233 (423)
Q Consensus 162 ~~~~----l~~~gd~Vl~~~p~y~----~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~ 233 (423)
++.+ ++++||+|+++.+.|+ .+...++..|++++.++.+.++.+|++++++.+. +++++|++++|+||||.
T Consensus 101 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~-~~t~lv~l~~~~n~tG~ 179 (406)
T PRK09295 101 VANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPALFD-ERTRLLAITHVSNVLGT 179 (406)
T ss_pred HHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCCCHHHHHHhcC-CCcEEEEEecchhcccc
Confidence 9886 4688999999998885 3455667789999999987777899999999996 68999999999999999
Q ss_pred CCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHh----
Q 014492 234 IINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA---- 308 (423)
Q Consensus 234 ~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~---- 308 (423)
++|.+++.++++. |+++++|++|..+... . .+...+..+++.|++|.+|.+| +||++.++++++.+...
T Consensus 180 ~~~~~~i~~~~~~~~~~vivD~a~~~g~~~---~-~~~~~~~D~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~~~~~g~ 253 (406)
T PRK09295 180 ENPLAEMIALAHQHGAKVLVDGAQAVMHHP---V-DVQALDCDFYVFSGHKLYGPTG--IGILYVKEALLQEMPPWEGGG 253 (406)
T ss_pred cCCHHHHHHHHHHcCCEEEEEcccccCccc---c-CchhcCCCEEEeehhhccCCCC--cEEEEEchHhHhhCCCcccCC
Confidence 9999999999987 9999999999754321 1 1223344588899999888666 79999998887654211
Q ss_pred --------------------cCCCCCcHHHHHHHHHHhCCh--HHHHHHHHHHHHHHHHHHHHHccCCCCeecC--CCce
Q 014492 309 --------------------KQPYNVSVAAEVAACAALQNP--IYLEKVKEALIKERERLFKLLKDVPFLNPYP--SYSN 364 (423)
Q Consensus 309 --------------------~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p--~~~~ 364 (423)
....+.+..+..++.++++.. ..++..+++.+++++++.+.|++++++.+.. ....
T Consensus 254 ~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~ 333 (406)
T PRK09295 254 SMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLG 333 (406)
T ss_pred ceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCce
Confidence 011256666777777777542 1356777888999999999998887666532 2245
Q ss_pred EEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC--------CCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492 365 FILCEVTSGMDAKKLKDDLAKMGVMIRHYNN--------KELKGYVRVSVG---KPEHTDALMECLMHL 422 (423)
Q Consensus 365 ~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~--------~~~~~~iRis~~---~~~~~~~l~~al~~l 422 (423)
.+.+.++ +.+..++.+.|.++||.++.|.. .+.++++|+|+. +.+|.+.|.++|+++
T Consensus 334 iv~~~~~-~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~~did~l~~~l~~i 401 (406)
T PRK09295 334 VIAFNLG-KHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVAGLQRI 401 (406)
T ss_pred EEEEEEC-CcCHHHHHHHHHhCCeEEeccccchHHHHHHHCCCCEEEEEccCCCCHHHHHHHHHHHHHH
Confidence 6667776 46778898888899999987653 123568999976 677888888888765
No 125
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.97 E-value=1.1e-29 Score=251.05 Aligned_cols=320 Identities=17% Similarity=0.168 Sum_probs=231.1
Q ss_pred CCCCeeEcCCCC-CCCCCCHHHHHHHhcC--CCCCCCCC----cch----HHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492 93 KPEDIVKIDANE-NPYGPPPEVREALGQL--KFPYIYPD----PES----RRLRAALAKDSGLESDHILVGCGADELIDL 161 (423)
Q Consensus 93 ~~~~~i~l~~~~-~~~~~~~~v~~al~~~--~~~~~Y~~----~g~----~~lr~~ia~~~g~~~~~i~~t~G~~~al~~ 161 (423)
.++++|+|..+. ..++++|++.+++.+. ...+.|+. .|. .++++.+++++|.+ ++|++|+| ++++..
T Consensus 40 ~g~~~i~l~~~~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~~-~~i~~tsG-~~a~~~ 117 (397)
T PRK06939 40 DGKEVINFCANNYLGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGTE-DAILYSSC-FDANGG 117 (397)
T ss_pred CCCeEEEeeccCccccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCCC-cEEEEcCh-HHHHHH
Confidence 467899999886 6788889988877762 22233321 233 46777788888864 78888888 668888
Q ss_pred HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc---C--CceEEEEcCCCCCcCcCCC
Q 014492 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---E--KPKCIFLTSPNNPDGSIIN 236 (423)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---~--~~~~i~l~~p~NPtG~~~~ 236 (423)
++++++++||.|++++|+|+.+...++..|++++.++. .|++++++.+++ . ++++|++.+.+||+|...+
T Consensus 118 ~~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~ 192 (397)
T PRK06939 118 LFETLLGKEDAIISDALNHASIIDGVRLCKAKRYRYAN-----NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAP 192 (397)
T ss_pred HHHHhCCCCCEEEEEhhhhHHHHHHHHhcCCceEEeCC-----CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCC
Confidence 88999999999999999999999888999999988863 478888887753 2 6778887788999999999
Q ss_pred HHHHHHHHcC-CCEEEEccCCccccC--CCc-hhhhhc-cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC
Q 014492 237 DEDLLKILEM-PILVVLDEAYTEFSG--LES-RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP 311 (423)
Q Consensus 237 ~~~l~~i~~~-~~~li~Deay~~~~~--~~~-~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~ 311 (423)
.+++.++|+. +++||+||+|..... .+. ...... ..+.+++++|+||.++ |+|+||+++++++++.+.....+
T Consensus 193 ~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~--g~r~G~v~~~~~~~~~l~~~~~~ 270 (397)
T PRK06939 193 LPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALG--GASGGYTAGRKEVIDWLRQRSRP 270 (397)
T ss_pred HHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhC--ccCceEEEeCHHHHHHHHHhCcc
Confidence 9999999987 999999999963221 111 112111 1245699999999884 56999999999999988765443
Q ss_pred C----CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCC
Q 014492 312 Y----NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMG 387 (423)
Q Consensus 312 ~----~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~g 387 (423)
+ +.++..+.++.++++..+..++.+++++++++++.+.|+++++ ...+..+.++++.++.+.+..++++.|.++|
T Consensus 271 ~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g 349 (397)
T PRK06939 271 YLFSNSLAPAIVAASIKVLELLEESDELRDRLWENARYFREGMTAAGF-TLGPGEHPIIPVMLGDAKLAQEFADRLLEEG 349 (397)
T ss_pred ccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcCC-CcCCCCCCEEEEEECCHHHHHHHHHHHHHCC
Confidence 2 2234445555555543222357788899999999999988753 3334445555555654456788999999889
Q ss_pred cEEEeCCCC---CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 388 VMIRHYNNK---ELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 388 I~v~~~~~~---~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
|.+.+...+ ...++|||+++...+.+++.+++++|
T Consensus 350 I~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L 387 (397)
T PRK06939 350 VYVIGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAF 387 (397)
T ss_pred ceEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHH
Confidence 999864321 23468999986433346666666654
No 126
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.97 E-value=3.2e-29 Score=247.64 Aligned_cols=312 Identities=19% Similarity=0.157 Sum_probs=227.3
Q ss_pred eeEcCCCCCCCCCCHHHHHHHhcC-C-C----CCCCCCc-c----hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHH
Q 014492 97 IVKIDANENPYGPPPEVREALGQL-K-F----PYIYPDP-E----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRC 165 (423)
Q Consensus 97 ~i~l~~~~~~~~~~~~v~~al~~~-~-~----~~~Y~~~-g----~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~ 165 (423)
.++|+.+.... +++.+++++.+. . . ...|+.. + .+++|+.+++++|.++++|++++|+++++..++.+
T Consensus 18 ~~yl~~~~~~~-~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~~~~~ 96 (397)
T TIGR01976 18 RVFFDNPAGTQ-IPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPPEVVFGANATSLTFLLSRA 96 (397)
T ss_pred eEEecCCccCC-CCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHHHHHHH
Confidence 58888765543 567788877652 1 1 1235432 2 46899999999999877899999999999888776
Q ss_pred h---cCCCCeEEEcCCCchhh----HHHHHHCCCeEEEecCCC-CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCH
Q 014492 166 V---LDPGDKIVDCPPTFTMY----EFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND 237 (423)
Q Consensus 166 l---~~~gd~Vl~~~p~y~~~----~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~ 237 (423)
+ +++||+|++..|.|... ...++..|++++.++.+. ++.+|++++++.+. +++++|++++|+||||.+++.
T Consensus 97 ~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~i~-~~~~lv~i~~~~n~tG~~~~~ 175 (397)
T TIGR01976 97 ISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEATGELHPDDLASLLS-PRTRLVAVTAASNTLGSIVDL 175 (397)
T ss_pred HHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccccCCCcCHHHHHHhcC-CCceEEEEeCCCCCCCccCCH
Confidence 5 68999999999988643 355677899999999754 67899999999997 689999999999999999999
Q ss_pred HHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCC----
Q 014492 238 EDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY---- 312 (423)
Q Consensus 238 ~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~---- 312 (423)
+++.++++. |+++++|+++.... .. ..+...+..+++.|++|.+| .|+||+++++++++.+......+
T Consensus 176 ~~i~~~~~~~~~~~ivD~a~~~~~---~~-~~~~~~~~d~~~~s~~K~~g---~~~G~l~~~~~~~~~l~~~~~~~~~~~ 248 (397)
T TIGR01976 176 AAITELVHAAGALVVVDAVHYAPH---GL-IDVQATGADFLTCSAYKFFG---PHMGILWGRPELLMNLPPYKLTFSYDT 248 (397)
T ss_pred HHHHHHHHHcCCEEEEehhhhccc---cC-CCHHHcCCCEEEEechhhcC---CceEEEEEcHHHHhhCCCccccCccCC
Confidence 999999987 99999999985321 11 11223344577789999764 46899999999887765433221
Q ss_pred --------CCcHHHHHHH---HHHhCChH-------------HHHHHHHHHHHHHHHHHHHHccCCCCeecCC-----Cc
Q 014492 313 --------NVSVAAEVAA---CAALQNPI-------------YLEKVKEALIKERERLFKLLKDVPFLNPYPS-----YS 363 (423)
Q Consensus 313 --------~~~~~~~~a~---~~~l~~~~-------------~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~-----~~ 363 (423)
+.+.....++ ...+.... ++++.+++..+.++++.+.|++++.+.+.++ .+
T Consensus 249 ~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~ 328 (397)
T TIGR01976 249 GPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARV 328 (397)
T ss_pred CcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCC
Confidence 2333333333 33332211 3567788888899999999998875655332 56
Q ss_pred eEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC-----------CCCCeEEEEe---cChhhHHHHHHH
Q 014492 364 NFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK-----------ELKGYVRVSV---GKPEHTDALMEC 418 (423)
Q Consensus 364 ~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~-----------~~~~~iRis~---~~~~~~~~l~~a 418 (423)
+++.+.++ +.+..++.++|.++||.++.+... ...+++|||+ .+.++++++.++
T Consensus 329 ~~~~~~~~-~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~ 396 (397)
T TIGR01976 329 PTVSFTVH-GLPPQRVVRRLADQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEA 396 (397)
T ss_pred ceEEEEeC-CcCHHHHHHHHHHCCeEEEeCccchHHHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHh
Confidence 78888776 567889999999999999976431 2346899999 455555555543
No 127
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.97 E-value=2.1e-29 Score=250.73 Aligned_cols=319 Identities=21% Similarity=0.239 Sum_probs=239.2
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhcC-C-C---CCC---CCCc----chHHHHHHHHHHhCCC-CCcEEEeCCHHHHHHH
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQL-K-F---PYI---YPDP----ESRRLRAALAKDSGLE-SDHILVGCGADELIDL 161 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~---~~~---Y~~~----g~~~lr~~ia~~~g~~-~~~i~~t~G~~~al~~ 161 (423)
.++++|+.+... ++++.+.+++.+. . . ... |... ..+++|+.+++++|.+ +++|++|+|++++++.
T Consensus 31 ~~~iyLd~a~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~al~~ 109 (424)
T PLN02855 31 SKLVYLDNAATS-QKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTSREIVFTRNATEAINL 109 (424)
T ss_pred CCeEEeeCcccc-CCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHHHHHH
Confidence 457999986654 4667888887652 1 1 111 1111 1458999999999985 5899999999999999
Q ss_pred HHHHh----cCCCCeEEEcCCCch----hhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCc
Q 014492 162 IMRCV----LDPGDKIVDCPPTFT----MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS 233 (423)
Q Consensus 162 ~~~~l----~~~gd~Vl~~~p~y~----~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~ 233 (423)
+++.+ +++||+|++..+.|+ .+...++..|++++.++.+.++.+|++++++.+. +++++|++++|+||||.
T Consensus 110 i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~~~~~~~~l~~~i~-~~t~lv~i~~~~n~tG~ 188 (424)
T PLN02855 110 VAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPDEVLDVEQLKELLS-EKTKLVATHHVSNVLGS 188 (424)
T ss_pred HHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHHhc-cCceEEEEeCccccccc
Confidence 98863 688999999999886 3555667789999999976666799999999997 68999999999999999
Q ss_pred CCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhc---
Q 014492 234 IINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK--- 309 (423)
Q Consensus 234 ~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~--- 309 (423)
++|.++|.++|+. |+++++|++|.... ... .+...+..+++.|++|.+|.+| +||+++++++++.+....
T Consensus 189 ~~~~~~I~~l~~~~g~~vivD~a~~~g~---~~~-~~~~~~~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~p~~~g~ 262 (424)
T PLN02855 189 ILPVEDIVHWAHAVGAKVLVDACQSVPH---MPV-DVQTLGADFLVASSHKMCGPTG--IGFLWGKSDLLESMPPFLGGG 262 (424)
T ss_pred cCCHHHHHHHHHHcCCEEEEEhhhhcCC---cCC-CchhcCCCEEEeecccccCCCc--cEEEEEchhhhhcCCCEecCC
Confidence 9999999999987 99999999996322 111 1223344588999999777555 899999988877653220
Q ss_pred --------------------CCCCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeecC-------
Q 014492 310 --------------------QPYNVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPYP------- 360 (423)
Q Consensus 310 --------------------~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p------- 360 (423)
...+.+.....++..+++. ...+++.+++.++.++++.+.|++++++.+..
T Consensus 263 ~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~ 342 (424)
T PLN02855 263 EMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKPSEGV 342 (424)
T ss_pred CceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCccccc
Confidence 0123445555555666643 23467888899999999999998886666542
Q ss_pred CCceEEEEEeCCCCCHHHHHHHHHhC-CcEEEeCCC--------CCCCCeEEEEe---cChhhHHHHHHHHhhh
Q 014492 361 SYSNFILCEVTSGMDAKKLKDDLAKM-GVMIRHYNN--------KELKGYVRVSV---GKPEHTDALMECLMHL 422 (423)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~l~~~L~~~-gI~v~~~~~--------~~~~~~iRis~---~~~~~~~~l~~al~~l 422 (423)
..++++.+.++ +.+..++.+.|.++ ||.++.+.. .+.++++|||+ .+.+|+++|.++|+.+
T Consensus 343 ~r~~~v~~~~~-~~~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt~~di~~l~~~l~~~ 415 (424)
T PLN02855 343 GRAALCAFNVE-GIHPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASARASLYFYNTKEEVDAFIHALKDT 415 (424)
T ss_pred CcccEEEEEEC-CcCHHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence 12467888887 56788999999866 999997652 13357899998 6788888888888754
No 128
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.97 E-value=1.2e-28 Score=239.24 Aligned_cols=316 Identities=20% Similarity=0.157 Sum_probs=227.1
Q ss_pred eeEcCCCC-CCCCCCHHHHHHHhcC-C-CCC---CC----C-CcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHH
Q 014492 97 IVKIDANE-NPYGPPPEVREALGQL-K-FPY---IY----P-DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC 165 (423)
Q Consensus 97 ~i~l~~~~-~~~~~~~~v~~al~~~-~-~~~---~Y----~-~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~ 165 (423)
+++|+.++ -..+.+|++.+++.+. . +.. .| . .+...++++.++++++.+ +.++++ ++++++..+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~-~~iv~~-sg~~a~~~~~~~ 80 (349)
T cd06454 3 VLNFCSNDYLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGKE-AALVFS-SGYAANDGVLST 80 (349)
T ss_pred ceecccCCccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCCC-CEEEec-cHHHHHHHHHHH
Confidence 46676653 2345579999988773 2 111 12 1 223578999999999964 455554 456687777888
Q ss_pred hcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc----CCceEEEEcCCCCCcCcCCCHHHHH
Q 014492 166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER----EKPKCIFLTSPNNPDGSIINDEDLL 241 (423)
Q Consensus 166 l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~----~~~~~i~l~~p~NPtG~~~~~~~l~ 241 (423)
++++||.|+++.|+|..+...++..|++++.++ .+|++.+++.+++ .+++++++++++||||...+.+++.
T Consensus 81 ~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~-----~~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~ 155 (349)
T cd06454 81 LAGKGDLIISDSLNHASIIDGIRLSGAKKRIFK-----HNDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAPLPELV 155 (349)
T ss_pred hcCCCCEEEEehhhhHHHHHHHHHcCCceEEec-----CCCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccCHHHHH
Confidence 889999999999999988888888999998886 2477888888864 4578888889999999999999999
Q ss_pred HHHcC-CCEEEEccCCccccCCC--chhhh--hccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC----C
Q 014492 242 KILEM-PILVVLDEAYTEFSGLE--SRMEW--VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP----Y 312 (423)
Q Consensus 242 ~i~~~-~~~li~Deay~~~~~~~--~~~~~--~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~----~ 312 (423)
++|+. |+++|+|++|....... ..... ....+.+++++|+||.++.+| ||++.++++++.+...... .
T Consensus 156 ~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~i~~~~~~~~~~~~~~~~~~~~~ 232 (349)
T cd06454 156 DLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAVG---GYIAGSKELIDYLRSYARGFIFST 232 (349)
T ss_pred HHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcccC---CEEECCHHHHHHHHHhchhhhccC
Confidence 99998 99999999997533211 11111 123467899999999998655 9999999988887665432 2
Q ss_pred CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEe
Q 014492 313 NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRH 392 (423)
Q Consensus 313 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~ 392 (423)
..++..+.++.++++.....+..+++++++++.+.+.|++++.....+.++.+.++.++++.+..++.+.|.++||.+++
T Consensus 233 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~ 312 (349)
T cd06454 233 SLPPAVAAAALAALEVLQGGPERRERLQENVRYLRRGLKELGFPVGGSPSHIIPPLIGDDPAKAVAFSDALLERGIYVQA 312 (349)
T ss_pred CCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcEEEEeCCChHHHHHHHHHHHhCCceEEE
Confidence 45666677777777543224667888999999999999887543333334444445444345678899999988999987
Q ss_pred CCCC---CCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492 393 YNNK---ELKGYVRVSVG---KPEHTDALMECLMHL 422 (423)
Q Consensus 393 ~~~~---~~~~~iRis~~---~~~~~~~l~~al~~l 422 (423)
+... ...+++||+++ +.++++++.++|+.+
T Consensus 313 ~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 313 IRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred ecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 5431 22579999986 555666666666543
No 129
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.97 E-value=6.5e-29 Score=243.89 Aligned_cols=316 Identities=17% Similarity=0.198 Sum_probs=222.4
Q ss_pred CCCCeeEcCCC--CCCCCCC-HHHHHHHhc-CCC----CCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHH
Q 014492 93 KPEDIVKIDAN--ENPYGPP-PEVREALGQ-LKF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (423)
Q Consensus 93 ~~~~~i~l~~~--~~~~~~~-~~v~~al~~-~~~----~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~ 164 (423)
.+..+|||.++ .+.++.. |.+.+++.+ +.. ...|+.+...+|++++++++|. +++++++|+++++..+++
T Consensus 25 ~g~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~--~~~~~~~sg~~a~~~a~~ 102 (379)
T TIGR00707 25 NGKEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLVHVSNLYYTEPQEELAEKLVEHSGA--DRVFFCNSGAEANEAALK 102 (379)
T ss_pred CCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhCCC--CEEEEeCCcHHHHHHHHH
Confidence 45678999886 4566654 888887765 221 2446666678999999999986 499999999999999888
Q ss_pred Hh---cC----CCCeEEEcCCCchhhHHHHHHCCCeEEE----ecCCCCCCC----CHHHHHHHhhcCCceEEEEcCCCC
Q 014492 165 CV---LD----PGDKIVDCPPTFTMYEFDAAVNGAAVVK----VPRKSDFSL----NVELIADAVEREKPKCIFLTSPNN 229 (423)
Q Consensus 165 ~l---~~----~gd~Vl~~~p~y~~~~~~~~~~g~~~~~----v~~~~~~~~----d~~~l~~~i~~~~~~~i~l~~p~N 229 (423)
.+ .. +||+|++++|+|+.+...+...+..... .+...++.. |++++++.+. .++++|++++++|
T Consensus 103 ~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~~~p~~~ 181 (379)
T TIGR00707 103 LARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAID-DETAAVIVEPIQG 181 (379)
T ss_pred HHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhh-hCeeEEEEEcccc
Confidence 54 22 3799999999998877776665554321 222222222 8999999986 5789999987778
Q ss_pred CcCcC-CCHHHHHHH---HcC-CCEEEEccCCccccCCCchh--hhhccCCcEEEEccChhhhcccCccccccccCHHHH
Q 014492 230 PDGSI-INDEDLLKI---LEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII 302 (423)
Q Consensus 230 PtG~~-~~~~~l~~i---~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~ 302 (423)
|+|.. ++.+++++| |+. ++++|+||+|.+|.+.+... ......++++ +|||.++ +|+|+||++++++++
T Consensus 182 ~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~~~~~~~~~~~d~~---t~sK~~~-~G~riG~~~~~~~~~ 257 (379)
T TIGR00707 182 EGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKFFAYEHYGIEPDII---TLAKGLG-GGVPIGATLAKEEVA 257 (379)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhhHHhcCCCCCEE---EEccccc-CCcccEEEEEcHHHH
Confidence 88864 566665555 444 99999999999876543221 1222233333 6899999 999999999999999
Q ss_pred HHHHHhc--CCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCC---CeecCCCceEEEEEeCCCCCHH
Q 014492 303 EYLWRAK--QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPF---LNPYPSYSNFILCEVTSGMDAK 377 (423)
Q Consensus 303 ~~l~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~---~~~~p~~~~~~~~~~~~~~~~~ 377 (423)
+.+.... ..++.++++|.++.++|+..+ ..+..++++++++++.+.|+++.. ....+..|+|+|+++++ +..
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~~~~~~~--~~~ 334 (379)
T TIGR00707 258 EAFTPGDHGSTFGGNPLACAAALAVLEVIE-KERLLENVKEKGDYFKERLEELGKNYPNKEVRGKGLMLGIELEA--PCK 334 (379)
T ss_pred hhhcCCCCCCCCCCCHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHHHHHHHHhhCCCCccccCceEEEEEecC--cHH
Confidence 8887633 347788999999998886322 124556667777777777665321 11234578899999863 478
Q ss_pred HHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 378 KLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 378 ~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
++.+.|.++||.+.+.+ .+++||+++...+.+++.+++++|
T Consensus 335 ~~~~~l~~~Gv~v~~~~----~~~lRi~~~~~~t~~~i~~~~~~l 375 (379)
T TIGR00707 335 DIVKKALEKGLLVNCAG----PKVLRFLPPLIITKEEIDEAVSAL 375 (379)
T ss_pred HHHHHHHHCCcEEeeCC----CCEEEEECCCcCCHHHHHHHHHHH
Confidence 89999999999999864 479999964322234455555443
No 130
>PRK07179 hypothetical protein; Provisional
Probab=99.97 E-value=3e-28 Score=241.24 Aligned_cols=317 Identities=17% Similarity=0.149 Sum_probs=232.9
Q ss_pred CCCCeeEcCCC-CCCCCCCHHHHHHHhcC-C-C------CCCC--CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492 93 KPEDIVKIDAN-ENPYGPPPEVREALGQL-K-F------PYIY--PDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (423)
Q Consensus 93 ~~~~~i~l~~~-~~~~~~~~~v~~al~~~-~-~------~~~Y--~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~ 161 (423)
++..+++|+.+ .-++..+|++++++.+. . + ...| +.....+|++.+++++|.+ .+++++|+++++..
T Consensus 52 ~g~~~~~~~~~~YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~~--~~~~~~sG~~An~~ 129 (407)
T PRK07179 52 PGPDAIILQSNDYLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFTGFE--SCLLCQSGWAANVG 129 (407)
T ss_pred CCCcEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHhCCC--cEEEECCHHHHHHH
Confidence 45678899776 56677889998887652 1 1 1122 2234678999999999963 56789999999999
Q ss_pred HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHH
Q 014492 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL 241 (423)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~ 241 (423)
++++++.+||.|++..+.|......++..|++++.++ ..|++++++.+++.++++|++++|+||||.+.|.+++.
T Consensus 130 ~l~~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~-----~~d~~~l~~~l~~~~~~lV~v~~v~n~tG~i~pl~~I~ 204 (407)
T PRK07179 130 LLQTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPFR-----HNDVDHLRRQIERHGPGIIVVDSVYSTTGTIAPLADIV 204 (407)
T ss_pred HHHHhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEec-----CCCHHHHHHHHHhcCCeEEEECCCCCCCCccccHHHHH
Confidence 9999999999999999999887777788898887765 35899999999744688899999999999999999999
Q ss_pred HHHcC-CCEEEEccCCccccCCCch---hhhhccC-CcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC--C--
Q 014492 242 KILEM-PILVVLDEAYTEFSGLESR---MEWVKKH-DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--Y-- 312 (423)
Q Consensus 242 ~i~~~-~~~li~Deay~~~~~~~~~---~~~~~~~-~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~--~-- 312 (423)
++|+. |+++|+||+|..+..+... ....+.. ..++++.|+||.+| .|+||+++++++++.+.....+ +
T Consensus 205 ~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g---~~~G~l~~~~~~~~~~~~~~~~~~~~~ 281 (407)
T PRK07179 205 DIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFA---GRAGIITCPRELAEYVPFVSYPAIFSS 281 (407)
T ss_pred HHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhh---ccCeEEEeCHHHHHHHHHhCcCeeeCC
Confidence 99987 9999999999854332221 2122211 22588999999886 2689999999988877655433 2
Q ss_pred CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEe
Q 014492 313 NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRH 392 (423)
Q Consensus 313 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~ 392 (423)
+.++....++.++++..+..++.+++++++++++.+.|++++ +.+. +.++++++.++...+...+.+.|.++||.+..
T Consensus 282 t~~~~~~aa~~aal~~~~~~~~~~~~l~~~~~~l~~~L~~~g-~~v~-~~~~i~~l~~~~~~~~~~~~~~L~~~GI~~~~ 359 (407)
T PRK07179 282 TLLPHEIAGLEATLEVIESADDRRARLHANARFLREGLSELG-YNIR-SESQIIALETGSERNTEVLRDALEERNVFGAV 359 (407)
T ss_pred CCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC-CCCC-CCCCEEEEEeCCHHHHHHHHHHHHHCCceEee
Confidence 334444444445554333345677889999999999999885 3444 45788888875333557788889999998654
Q ss_pred CCC---CCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 393 YNN---KELKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 393 ~~~---~~~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
... +...+++||+++ +.++++++.++|+.
T Consensus 360 ~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~ 394 (407)
T PRK07179 360 FCAPATPKNRNLIRLSLNADLTASDLDRVLEVCRE 394 (407)
T ss_pred ecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 322 234679999998 66667777666654
No 131
>PLN02822 serine palmitoyltransferase
Probab=99.97 E-value=2.6e-28 Score=244.70 Aligned_cols=320 Identities=17% Similarity=0.157 Sum_probs=235.2
Q ss_pred CCCCeeEcCCC-CCCCCCCHHHHHHHhc-C-CCCCC-------C-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492 93 KPEDIVKIDAN-ENPYGPPPEVREALGQ-L-KFPYI-------Y-PDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (423)
Q Consensus 93 ~~~~~i~l~~~-~~~~~~~~~v~~al~~-~-~~~~~-------Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~ 161 (423)
.++++++|..+ ...+..+|++.+++.+ + .++.+ | +.....+|+++|+++++. ++.|++++|.+ ++..
T Consensus 107 ~G~~~id~~s~~~lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~-~~~i~~s~G~~-a~~s 184 (481)
T PLN02822 107 NGKDVVNFASANYLGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGT-PDSILYSYGLS-TIFS 184 (481)
T ss_pred CCceEEEeECCCcCCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhCC-CCEEEECCHHH-HHHH
Confidence 45788999877 4467778999888776 2 22222 3 223478999999999994 57899999888 5677
Q ss_pred HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhh---c-----CCc-eEEEEcCCCCCcC
Q 014492 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE---R-----EKP-KCIFLTSPNNPDG 232 (423)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~---~-----~~~-~~i~l~~p~NPtG 232 (423)
++.+++++||.|++....|..+...++..|.+++.++.+ |.+.++..++ + .++ ++|++++++|+||
T Consensus 185 ai~a~~~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~n-----d~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G 259 (481)
T PLN02822 185 VIPAFCKKGDIIVADEGVHWGIQNGLYLSRSTIVYFKHN-----DMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSG 259 (481)
T ss_pred HHHHhCCCCCEEEEeCCccHHHHHHHHHcCCeEEEECCC-----CHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCC
Confidence 888899999999988888788877888899999999843 3334433332 1 234 6888889999999
Q ss_pred cCCCHHHHHHHHcC-CCEEEEccCCccccCCCch---hhhhc--cCCcEEEEccChhhhcccCccccccccCHHHHHHHH
Q 014492 233 SIINDEDLLKILEM-PILVVLDEAYTEFSGLESR---MEWVK--KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW 306 (423)
Q Consensus 233 ~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~---~~~~~--~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~ 306 (423)
.+.+.+++.+|++. |+++|+||+|..+..+... ....+ ..+.+++++||||.+|+.| ||+++++++++.+.
T Consensus 260 ~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~G---G~i~g~~~ii~~~~ 336 (481)
T PLN02822 260 QIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATEG---GFCTGSARVVDHQR 336 (481)
T ss_pred CccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhhCC---eEEEcCHHHHHHHH
Confidence 99999999999987 9999999999966543221 12221 1355789999999999889 99999999999887
Q ss_pred HhcCC--CC--CcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCCCC-----C-
Q 014492 307 RAKQP--YN--VSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTSGM-----D- 375 (423)
Q Consensus 307 ~~~~~--~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~~~-----~- 375 (423)
..... |+ .++..+.++.++|+..+...+.+++++++++++.+.|+++.++.+ .+++++++++.+++.. +
T Consensus 337 ~~~~~~~fsa~lPp~~~~Aa~~aL~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~spi~~l~l~~~~~~~~~~~ 416 (481)
T PLN02822 337 LSSSGYVFSASLPPYLASAAITAIDVLEDNPSVLAKLKENIALLHKGLSDIPGLSIGSNTLSPIVFLHLEKSTGSAKEDL 416 (481)
T ss_pred hcCCceeeccccCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEEEEeCCCcccccchH
Confidence 65443 33 346777888788864333357888999999999999998744443 4678889999986321 1
Q ss_pred --HHHHHHHHH-hCCcEEEeCCC--C---CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 376 --AKKLKDDLA-KMGVMIRHYNN--K---ELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 376 --~~~l~~~L~-~~gI~v~~~~~--~---~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
..++++.|. ++||.+.++.. + ..+.++||+++...+.++|.+++++|
T Consensus 417 ~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l 471 (481)
T PLN02822 417 SLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESL 471 (481)
T ss_pred HHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHH
Confidence 357889987 88999997543 1 12458999987544445566655554
No 132
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.97 E-value=2.5e-28 Score=240.26 Aligned_cols=320 Identities=16% Similarity=0.145 Sum_probs=226.8
Q ss_pred CCCCCeeEcCCCC-CCCCCCHHHHHHHhcC-C-CC---CCCC-Ccch----HHHHHHHHHHhCCCCCcEEEeCCHHHHHH
Q 014492 92 RKPEDIVKIDANE-NPYGPPPEVREALGQL-K-FP---YIYP-DPES----RRLRAALAKDSGLESDHILVGCGADELID 160 (423)
Q Consensus 92 ~~~~~~i~l~~~~-~~~~~~~~v~~al~~~-~-~~---~~Y~-~~g~----~~lr~~ia~~~g~~~~~i~~t~G~~~al~ 160 (423)
..+++++||+.++ ..++++|.+.+++.+. . .. ..|. ..|. .++++.+++++|. ++.|++++|++ ++.
T Consensus 30 ~~g~~~id~~~~~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~-~~~i~~~sG~~-a~~ 107 (385)
T TIGR01825 30 VNGKEVINLSSNNYLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKT-EAALVFQSGFN-TNQ 107 (385)
T ss_pred ECCceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCC-CcEEEECcHHH-HHH
Confidence 3467899999886 5777888888877652 1 21 2242 2243 4555566666674 46788888855 566
Q ss_pred HHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc---CCceEEEEcCCCCCcCcCCCH
Q 014492 161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIIND 237 (423)
Q Consensus 161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~ 237 (423)
.++..++++||.|+++.|+|..+...++..|++++.++ .+|++++++.+.+ .++++|++++++||||.+.+.
T Consensus 108 ~a~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~-----~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~~ 182 (385)
T TIGR01825 108 GVLSALLRKGDIVLSDELNHASIIDGLRLTKATKKIYK-----HADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAPL 182 (385)
T ss_pred HHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEeC-----CCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCccCH
Confidence 78888899999999999999988888888888887764 5788888887753 368888888999999999999
Q ss_pred HHHHHHHcC-CCEEEEccCCccccCCC--c-hhhhhc-cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCC
Q 014492 238 EDLLKILEM-PILVVLDEAYTEFSGLE--S-RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY 312 (423)
Q Consensus 238 ~~l~~i~~~-~~~li~Deay~~~~~~~--~-~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~ 312 (423)
+++.++|+. |+++|+||+|..+..+. . .....+ ..+.+++++||||.+|++| ||+++++++++.+......+
T Consensus 183 ~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~~~~~~~~~~~~~~~~~~~ 259 (385)
T TIGR01825 183 PEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAIGVVG---GYAAGHKELIEYLKNRARPF 259 (385)
T ss_pred HHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHhhcCC---CEEecCHHHHHHHHHhCccc
Confidence 999999987 99999999998764321 1 111111 2567899999999998766 99999999999887654432
Q ss_pred ----CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCc
Q 014492 313 ----NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGV 388 (423)
Q Consensus 313 ----~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI 388 (423)
..++..+.++.++++......+..++++++++++.+.|++++ +.+.++.++++.+.++...+..++++.|.++||
T Consensus 260 ~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gi 338 (385)
T TIGR01825 260 LFSTAQPPAVVAALAAAVDELQRSPELMERLWDNTRFFKAGLGKLG-YDTGGSETPITPVVIGDEKAAQEFSRRLFDEGI 338 (385)
T ss_pred cccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC-CCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCc
Confidence 235566777777775321123466777888999999998875 344445556777666533356789999998899
Q ss_pred EEEeCCC---CCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 389 MIRHYNN---KELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 389 ~v~~~~~---~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.++.... ..+.++||+++....+.+++.+++++|
T Consensus 339 ~v~~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l 375 (385)
T TIGR01825 339 FAQSIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAY 375 (385)
T ss_pred EEcccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHH
Confidence 9865433 224478999875322234455444443
No 133
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.97 E-value=2.6e-28 Score=239.13 Aligned_cols=282 Identities=18% Similarity=0.171 Sum_probs=214.5
Q ss_pred hHHHHHHHHHHhCCC-CCcEEEeCCHHHHHHHHHHHhcC---CCCeEEEcCCCchhh----HHHHHHCCCeEEEecCCCC
Q 014492 131 SRRLRAALAKDSGLE-SDHILVGCGADELIDLIMRCVLD---PGDKIVDCPPTFTMY----EFDAAVNGAAVVKVPRKSD 202 (423)
Q Consensus 131 ~~~lr~~ia~~~g~~-~~~i~~t~G~~~al~~~~~~l~~---~gd~Vl~~~p~y~~~----~~~~~~~g~~~~~v~~~~~ 202 (423)
..++|+.+++++|.+ +++|++|+|+++++..++.++.. +||+|++++++|+.. ...++..|++++.++.+.+
T Consensus 45 ~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 124 (373)
T cd06453 45 YEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDD 124 (373)
T ss_pred HHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCCC
Confidence 457999999999987 78999999999999999999887 899999999999763 3455578999999998777
Q ss_pred CCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccC
Q 014492 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF 281 (423)
Q Consensus 203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~ 281 (423)
+.+|++++++.+. +++++|++++|+||||.+.+.+++.++|+. |+++++|++|...... . .....+..+++.|+
T Consensus 125 ~~~d~~~l~~~l~-~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~---~-~~~~~~~d~~~~s~ 199 (373)
T cd06453 125 GQLDLEALEKLLT-ERTKLVAVTHVSNVLGTINPVKEIGEIAHEAGVPVLVDGAQSAGHMP---V-DVQDLGCDFLAFSG 199 (373)
T ss_pred CCcCHHHHHHHhc-CCceEEEEeCcccccCCcCCHHHHHHHHHHcCCEEEEEhhhhcCcee---e-eccccCCCEEEecc
Confidence 7899999999997 589999999999999999999999999987 9999999998743211 1 11122345777899
Q ss_pred hhhhcccCccccccccCHHHHHHHHHhcCC-----------------------CCCcHHHHHHHHHHhCC--hHHHHHHH
Q 014492 282 SKRAGLAGLRVGYGAFPLSIIEYLWRAKQP-----------------------YNVSVAAEVAACAALQN--PIYLEKVK 336 (423)
Q Consensus 282 SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~-----------------------~~~~~~~~~a~~~~l~~--~~~~~~~~ 336 (423)
+|.++. .++|++++++++++.+...... .+++.....++.++++. ...+++++
T Consensus 200 ~K~~~~--~g~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~ 277 (373)
T cd06453 200 HKMLGP--TGIGVLYGKEELLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIA 277 (373)
T ss_pred ccccCC--CCcEEEEEchHHhhcCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHH
Confidence 998874 5689999999888776543210 13444445454554542 12357778
Q ss_pred HHHHHHHHHHHHHHccCCCCeecC---CCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC--------CCCCCeEEEE
Q 014492 337 EALIKERERLFKLLKDVPFLNPYP---SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN--------KELKGYVRVS 405 (423)
Q Consensus 337 ~~~~~~~~~l~~~L~~~~~~~~~p---~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~--------~~~~~~iRis 405 (423)
++.+++++++.+.|++++++.+.+ ..++++++.++ +.+..++.+.|.++||.+.++.. .+.+++|||+
T Consensus 278 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~l~~~gi~i~~g~~~~~~~~~~~~~~~~iRis 356 (373)
T cd06453 278 AHEHELTAYALERLSEIPGVRVYGDAEDRAGVVSFNLE-GIHPHDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRAS 356 (373)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEeCCccccCCeEEEEEC-CcCHHHHHHHHHHCCEEeccCccchhHHHHHhCCCCeEEEE
Confidence 888899999999999887666532 24667888886 46788999999999999986653 2236799999
Q ss_pred ecChhhHHHHHHHHh
Q 014492 406 VGKPEHTDALMECLM 420 (423)
Q Consensus 406 ~~~~~~~~~l~~al~ 420 (423)
++...+.+++++.++
T Consensus 357 ~~~~~t~~di~~~~~ 371 (373)
T cd06453 357 FGLYNTEEEIDALVE 371 (373)
T ss_pred ecCCCCHHHHHHHHh
Confidence 983333344554444
No 134
>PLN02483 serine palmitoyltransferase
Probab=99.97 E-value=3.9e-28 Score=243.87 Aligned_cols=319 Identities=17% Similarity=0.172 Sum_probs=226.0
Q ss_pred CCCeeEcCCCC-CCCC-----CCHHHHHHHhcCCC---C--CCCC-CcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492 94 PEDIVKIDANE-NPYG-----PPPEVREALGQLKF---P--YIYP-DPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (423)
Q Consensus 94 ~~~~i~l~~~~-~~~~-----~~~~v~~al~~~~~---~--~~Y~-~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~ 161 (423)
..+.++|+++. -.+. +.+.+.+++.+... + ..|+ .....++++++|+++| .++.|++++|....+ .
T Consensus 99 ~~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g-~~~ai~~~~G~~an~-~ 176 (489)
T PLN02483 99 TRRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVG-KPAAIVFGMGYATNS-T 176 (489)
T ss_pred CceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhC-CCcEEEECCHHHHHH-H
Confidence 45678887652 2333 23567777776432 1 2364 4468899999999999 567888888866544 6
Q ss_pred HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc------CCc-----eEEEEc-CCCC
Q 014492 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER------EKP-----KCIFLT-SPNN 229 (423)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~------~~~-----~~i~l~-~p~N 229 (423)
++.+++++||.|++++|+|..+...++..|++++.++.+ |++++++.+++ +++ ++++++ +..|
T Consensus 177 ~i~al~~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~-----d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s 251 (489)
T PLN02483 177 IIPALIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYS 251 (489)
T ss_pred HHHHhCCCCCEEEEcchhhHHHHHHHHHcCCeEEEEeCC-----CHHHHHHHHHhhhhccccccccCCceEEEEECCCCC
Confidence 777799999999999999999999999999999999842 45555554431 222 555555 6679
Q ss_pred CcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCc---hhhh--hccCCcEEEEccChhhhcccCccccccccCHHHHH
Q 014492 230 PDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLES---RMEW--VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 303 (423)
Q Consensus 230 PtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~---~~~~--~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~ 303 (423)
++|.+.+.+++.++++. ++++|+||+|+....+.. .... +...+.+|+++||||+||+.| ||+++++++++
T Consensus 252 ~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~G---G~i~~~~~li~ 328 (489)
T PLN02483 252 MEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSCG---GYIAGSKELIQ 328 (489)
T ss_pred CCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccCc---eEEEcCHHHHH
Confidence 99999999999999997 999999999985432221 1222 222466899999999999887 99999999999
Q ss_pred HHHHhcCC--C--CCcHHHHHHHHHHhC-----C-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCC
Q 014492 304 YLWRAKQP--Y--NVSVAAEVAACAALQ-----N-PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSG 373 (423)
Q Consensus 304 ~l~~~~~~--~--~~~~~~~~a~~~~l~-----~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~ 373 (423)
.+...... + ..++....++.++|+ + .++..+.+++++++++++.+.|+++++....+.++..+++.+...
T Consensus 329 ~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~G~~v~~~~~sp~~~l~l~~~ 408 (489)
T PLN02483 329 YLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNP 408 (489)
T ss_pred HHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCEEEEEECCH
Confidence 99876432 2 234444334444442 2 234566788899999999999999864322344556777766533
Q ss_pred CCHHHHHHHHHhCCcEEEeCCC---CCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 374 MDAKKLKDDLAKMGVMIRHYNN---KELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 374 ~~~~~l~~~L~~~gI~v~~~~~---~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.+..++.+.|+++||.+.+... +...+.+||+++...+.+++++++++|
T Consensus 409 ~~~~~~~~~Ll~~GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId~~l~~L 460 (489)
T PLN02483 409 AKIPAFSRECLKQNVAVVVVGFPATPLLLARARICISASHSREDLIKALEVI 460 (489)
T ss_pred HHHHHHHHHHHHCCcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence 4567899999999999986433 233578999997544446666666654
No 135
>PRK07049 methionine gamma-lyase; Validated
Probab=99.97 E-value=3.2e-28 Score=240.43 Aligned_cols=282 Identities=17% Similarity=0.212 Sum_probs=209.1
Q ss_pred CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHH----HHCCCeEEEecC
Q 014492 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPR 199 (423)
Q Consensus 124 ~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~ 199 (423)
.+|+++....|+++||++.|. +++++++|+++++..++.+++++||.|+++.|+|..+...+ +..|++++.++.
T Consensus 78 ~R~~~Pt~~~Le~~lA~leg~--~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~ 155 (427)
T PRK07049 78 SRFNHPNSEIVEDRLAVYEGA--ESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFAD 155 (427)
T ss_pred cCCCCcCHHHHHHHHHHHhCC--CcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeC
Confidence 568999889999999999984 46778888888999999999999999999999999886653 457999888872
Q ss_pred CCCCCCCHHHHHHHhh----cCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-------CCEEEEccCCccccCCCchhhh
Q 014492 200 KSDFSLNVELIADAVE----REKPKCIFLTSPNNPDGSIINDEDLLKILEM-------PILVVLDEAYTEFSGLESRMEW 268 (423)
Q Consensus 200 ~~~~~~d~~~l~~~i~----~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-------~~~li~Deay~~~~~~~~~~~~ 268 (423)
..|++++++.+. ++++|+|++++|+||||.+++.+++.+|++. ++++|+||+|..+.... +.
T Consensus 156 ----~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~~-pl-- 228 (427)
T PRK07049 156 ----GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVFQK-PL-- 228 (427)
T ss_pred ----CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccccccCC-cc--
Confidence 356777776663 2579999999999999999999999999875 68999999987544221 11
Q ss_pred hccCCcEEEEccChhhhc-ccCccccccccCHHHHHHHHHhcCCC--CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 014492 269 VKKHDNLIVLRTFSKRAG-LAGLRVGYGAFPLSIIEYLWRAKQPY--NVSVAAEVAACAALQNPIYLEKVKEALIKERER 345 (423)
Q Consensus 269 ~~~~~~~i~i~S~SK~~g-~~G~R~G~i~~~~~~~~~l~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 345 (423)
..+..+++.|+||.+| .+|+|+||+++++++++.+...+..+ .++++.+.++...|+ .+..+.++..++++.
T Consensus 229 --~~g~divv~S~SK~~gG~~glr~G~vv~~~~l~~~l~~~~~~~g~~ls~~~a~l~~r~L~---tl~~R~~~~~~~a~~ 303 (427)
T PRK07049 229 --EHGADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQVRALRSAIGTQLDPHSCWMLGRSLE---TLVLRMERANRNARA 303 (427)
T ss_pred --ccCCCEEEEcCceeecCCCCcEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcCCC---hHHHHHHHHHHHHHH
Confidence 2345689999999998 69999999999999999888776654 478888888777775 355556677899999
Q ss_pred HHHHHccCCCCe--ecCC------------------CceEEEEEeCCC-CCHHHHHHHHHhCCcEEEeCCC---------
Q 014492 346 LFKLLKDVPFLN--PYPS------------------YSNFILCEVTSG-MDAKKLKDDLAKMGVMIRHYNN--------- 395 (423)
Q Consensus 346 l~~~L~~~~~~~--~~p~------------------~~~~~~~~~~~~-~~~~~l~~~L~~~gI~v~~~~~--------- 395 (423)
+.+.|++.+.+. .+|+ .|..+.+++.++ .....|++.|.=-++.+.-|+.
T Consensus 304 la~~L~~~p~V~~v~yp~~l~~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~l~~~~~slG~~~sli~~~~~ 383 (427)
T PRK07049 304 VAEFLRDHPKVEKLHYLPFLDPDSAYGAVYKRQCTGAGSTFSFDIKGGQAAAFRFLNALQIFKLAVSLGGTESLASHPAS 383 (427)
T ss_pred HHHHHHhCCCccEEECCCCCCCCCccHHHHHhhCCCCccEEEEEEcCCHHHHHHHHHcCcccEEcccCCCCCceeeCCCc
Confidence 999999876543 2342 244667777532 2234555555421221221110
Q ss_pred --------------CCCCCeEEEEecChhhHHHHHHHHh
Q 014492 396 --------------KELKGYVRVSVGKPEHTDALMECLM 420 (423)
Q Consensus 396 --------------~~~~~~iRis~~~~~~~~~l~~al~ 420 (423)
.-.++.||||++.++ .|+|.+-|+
T Consensus 384 ~~h~~~~~~~~~~~gi~~~liR~svGlE~-~~dl~~dl~ 421 (427)
T PRK07049 384 MTHSGVPADVRERIGVLESTIRLSIGIEH-PDDLIADLA 421 (427)
T ss_pred cccccCCHHHHHhcCCCcCeEEEEeCcCC-HHHHHHHHH
Confidence 012468999999865 466655544
No 136
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.97 E-value=6e-28 Score=239.17 Aligned_cols=318 Identities=19% Similarity=0.160 Sum_probs=229.8
Q ss_pred CCCeeEcCCC-CCCCCCCHHHHHHHhc-CC-CCC-------CC-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492 94 PEDIVKIDAN-ENPYGPPPEVREALGQ-LK-FPY-------IY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (423)
Q Consensus 94 ~~~~i~l~~~-~~~~~~~~~v~~al~~-~~-~~~-------~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~ 162 (423)
++++++|+++ +..++++|++.+++.+ +. ++. .| +++...+|++++++++|. ++.+++++|+ ++...+
T Consensus 45 ~~~~~~~~s~dylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g~-~~~~~~~sG~-~an~~a 122 (407)
T PRK09064 45 EREVTVWCSNDYLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHGK-EAALVFTSGY-VSNDAT 122 (407)
T ss_pred CceEEEEECCCCcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhCC-CcEEEECcHH-HHHHHH
Confidence 3568899766 5678889999988876 21 111 13 344577899999999994 5667777765 566666
Q ss_pred HHHhcC--CCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc---CCceEEEEcCCCCCcCcCCCH
Q 014492 163 MRCVLD--PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIIND 237 (423)
Q Consensus 163 ~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~ 237 (423)
+..++. +++.|+.....|......++..|+++..++. .|++++++.++. +++++|++++|+||+|.+.+.
T Consensus 123 i~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~~l 197 (407)
T PRK09064 123 LSTLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIFRH-----NDVAHLEELLAAADPDRPKLIAFESVYSMDGDIAPI 197 (407)
T ss_pred HHHHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEECC-----CCHHHHHHHHHhccCCCCeEEEEeCCCCCCccccCH
Confidence 665554 6777776666676666667778888776662 367777777752 468899999999999999999
Q ss_pred HHHHHHHcC-CCEEEEccCCccccCC--Cchh-hhhcc-CCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCC
Q 014492 238 EDLLKILEM-PILVVLDEAYTEFSGL--ESRM-EWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY 312 (423)
Q Consensus 238 ~~l~~i~~~-~~~li~Deay~~~~~~--~~~~-~~~~~-~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~ 312 (423)
+++.++|+. |+++|+||+|....++ +... ...+. .+.+++++||||.||++| ||+++++++++.+.....++
T Consensus 198 ~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~~~~~~~~~~~l~~~~~~~ 274 (407)
T PRK09064 198 AEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVMG---GYIAGSAALVDAVRSYAPGF 274 (407)
T ss_pred HHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhccC---ceEecCHHHHHHHHHhCccc
Confidence 999999997 9999999999743222 2121 11111 234788999999999888 99999999999887665443
Q ss_pred ----CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHH-hCC
Q 014492 313 ----NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-KMG 387 (423)
Q Consensus 313 ----~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~-~~g 387 (423)
+.++.++.++.++++..+.....+++++++++++.+.|+++++ .+.++.++|+++.+++..++.++.+.|. ++|
T Consensus 275 ~~t~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~iv~i~~~~~~~~~~l~~~L~~~~g 353 (407)
T PRK09064 275 IFTTSLPPAIAAAALASIRHLKESNEERERHQERAAKLKAALDAAGI-PVMPNESHIVPVMVGDPEKCKKASDMLLEEHG 353 (407)
T ss_pred cccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcCC-CCCCCCCCEEEEEeCCHHHHHHHHHHHHHhCC
Confidence 4566677777777654222234467888999999999998763 4455678888888753345678888887 569
Q ss_pred cEEEeCCCC---CCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492 388 VMIRHYNNK---ELKGYVRVSVG---KPEHTDALMECLMHL 422 (423)
Q Consensus 388 I~v~~~~~~---~~~~~iRis~~---~~~~~~~l~~al~~l 422 (423)
|.+++...+ .+.+++||+++ +.++++++.++|+++
T Consensus 354 i~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~ 394 (407)
T PRK09064 354 IYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEV 394 (407)
T ss_pred EEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 999875442 23478999998 777788888877653
No 137
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.97 E-value=1.1e-27 Score=233.08 Aligned_cols=308 Identities=13% Similarity=0.117 Sum_probs=229.7
Q ss_pred CCCCCCHHHHHHHhcCCCCCC---CCCcchHHHHHHHHHHhCCCCC--cEEEeCCHHHHHHHHHHHhcCCCCeEEEcCC-
Q 014492 105 NPYGPPPEVREALGQLKFPYI---YPDPESRRLRAALAKDSGLESD--HILVGCGADELIDLIMRCVLDPGDKIVDCPP- 178 (423)
Q Consensus 105 ~~~~~~~~v~~al~~~~~~~~---Y~~~g~~~lr~~ia~~~g~~~~--~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p- 178 (423)
.|..+++.+.+++.. ...++ |+ .-..++|+.+++++|++++ .|++++|+++++..++..++.+||++++..+
T Consensus 6 ~p~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi~~~~~ 83 (355)
T TIGR03301 6 GPLSTSATVRDAMLV-DWCHWDSEFN-DVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLVLING 83 (355)
T ss_pred CCCCCCHHHHHHhhh-hccCCCHHHH-HHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEEEECCC
Confidence 355667889999876 22222 33 2367899999999999765 5778999999999999999888887665554
Q ss_pred Cchh-hHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-CCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccC
Q 014492 179 TFTM-YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEA 255 (423)
Q Consensus 179 ~y~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Dea 255 (423)
.|+. +...++..|.+++.++.++++.+|++++++.+.+ .+++++++++++||||.+.+.+++.++|+. ++++|+|++
T Consensus 84 ~~~~~~~~~a~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~livD~~ 163 (355)
T TIGR03301 84 AYGERLAKICEYLGIPHTDLNFSEYEPPDLNRIEEALAADPDITHVATVHHETTTGILNPLEAIAKVARSHGAVLIVDAM 163 (355)
T ss_pred chhhHHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhHHHHHHHHHHHcCCEEEEEec
Confidence 5543 5667788999999999877789999999999864 356788888999999999999999999987 999999987
Q ss_pred CccccCCCchhhhhccCCcEEEEccChhhh-cccCccccccccCHHHHHHHHHh-------------------cCCCCCc
Q 014492 256 YTEFSGLESRMEWVKKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYLWRA-------------------KQPYNVS 315 (423)
Q Consensus 256 y~~~~~~~~~~~~~~~~~~~i~i~S~SK~~-g~~G~R~G~i~~~~~~~~~l~~~-------------------~~~~~~~ 315 (423)
++.... + . .+...+..++++|++|.+ |++| +||+++++++++.+... ...++++
T Consensus 164 ~s~g~~-~--~-~~~~~~~d~~~~s~~K~l~~~~G--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 237 (355)
T TIGR03301 164 SSFGAI-P--I-DIEELDVDALIASANKCLEGVPG--FGFVIARRDLLEASAGNARSLYLDLYDQWAYMEKTGKWRFTPP 237 (355)
T ss_pred cccCCc-c--c-chhhcCccEEEecCCcccccCCc--eeEEEECHHHHHHhhCCCCCceeeHHHHHHHhhhcCCCCCCCc
Confidence 764321 1 1 122345668899999976 5556 69999999988876521 1234667
Q ss_pred HHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCC---CceEEEEEeCCC--CCHHHHHHHHHhCC
Q 014492 316 VAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPYPS---YSNFILCEVTSG--MDAKKLKDDLAKMG 387 (423)
Q Consensus 316 ~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~---~~~~~~~~~~~~--~~~~~l~~~L~~~g 387 (423)
...+.++..+++. ..++++..++++++++++.+.|+++++..+.+. .+.++++.+|+. .+.+++.+.|.++|
T Consensus 238 ~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 317 (355)
T TIGR03301 238 THTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRALGFQPLLPERWQSPIIVSFLYPDDPDFDFDDFYQELKERG 317 (355)
T ss_pred HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCCCCcEEEEECCCCCcchHHHHHHHHHHCC
Confidence 7777776666653 223677888899999999999988864323332 345678888743 45678999999999
Q ss_pred cEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 388 VMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 388 I~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
|.+.++.... .+++||++. +.++++++.++|+.
T Consensus 318 i~i~~~~~~~-~~~iRis~~~~~~~~~i~~~~~~l~~ 353 (355)
T TIGR03301 318 FVIYPGKLTL-ADTFRIGTIGEIDAADIERLLEAIKD 353 (355)
T ss_pred EEEECCcccc-ccEEEEecCCCCCHHHHHHHHHHHHh
Confidence 9999876432 379999974 56666777766654
No 138
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.97 E-value=1.5e-27 Score=235.85 Aligned_cols=317 Identities=21% Similarity=0.209 Sum_probs=227.5
Q ss_pred CCeeEcCCC-CCCCCCCHHHHHHHhcC-C-CCC-------CCC-CcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492 95 EDIVKIDAN-ENPYGPPPEVREALGQL-K-FPY-------IYP-DPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (423)
Q Consensus 95 ~~~i~l~~~-~~~~~~~~~v~~al~~~-~-~~~-------~Y~-~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~ 163 (423)
+++++|+.| +..++.+|++++++.+. . ++. .|. .+...+|++.+++++|. ++.+++++| ++++..++
T Consensus 45 ~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g~-~~~l~~~sG-~~an~~ai 122 (402)
T TIGR01821 45 KDVTVWCSNDYLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHGK-ESALVFTSG-YVANDATL 122 (402)
T ss_pred eeEEEeEccCcCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhCC-CeEEEECch-HHHHHHHH
Confidence 557888765 67788999999888762 1 221 122 23467899999999994 445555555 67777888
Q ss_pred HHhcC--CCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc---CCceEEEEcCCCCCcCcCCCHH
Q 014492 164 RCVLD--PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDE 238 (423)
Q Consensus 164 ~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~~ 238 (423)
..+.. +++.|+.....|......++..|+++..++. .|++++++.++. .++++|++++|+||||.+.+.+
T Consensus 123 ~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~~l~ 197 (402)
T TIGR01821 123 ATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFRH-----NDVAHLEKLLQSVDPNRPKIIAFESVYSMDGDIAPIE 197 (402)
T ss_pred HHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEECC-----CCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHH
Confidence 87765 6777776666777666777778888776652 366777776642 3678999999999999999999
Q ss_pred HHHHHHcC-CCEEEEccCCccccCCCch---hhhhcc-CCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCC-
Q 014492 239 DLLKILEM-PILVVLDEAYTEFSGLESR---MEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY- 312 (423)
Q Consensus 239 ~l~~i~~~-~~~li~Deay~~~~~~~~~---~~~~~~-~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~- 312 (423)
++.++|+. |+++|+||+|....+++.. ....+. .+.+++++||||+||++| ||+++++++++.+.....++
T Consensus 198 ~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~i~~~~~~~~~l~~~~~~~~ 274 (402)
T TIGR01821 198 EICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG---GYIAASRKLIDAIRSYAPGFI 274 (402)
T ss_pred HHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccCC---ceeecCHHHHHHHHHhCcCce
Confidence 99999987 9999999999843322211 111111 123688899999999888 99999999999887655443
Q ss_pred ---CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHH-hCCc
Q 014492 313 ---NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-KMGV 388 (423)
Q Consensus 313 ---~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~-~~gI 388 (423)
+.++.++.++.++|+..+.....+++++++++++.+.|+++++ .+.++.++++.+.++....+.++.+.|. ++||
T Consensus 275 ~t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~i~~i~~~~~~~a~~~~~~L~~~~Gi 353 (402)
T TIGR01821 275 FTTSLPPAIAAGATASIRHLKESQDLRRAHQENVKRLKNLLEALGI-PVIPNPSHIVPVIIGDAALCKKVSDLLLNKHGI 353 (402)
T ss_pred ecCcCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHcCC-CcCCCCCCEEEEEeCCHHHHHHHHHHHHhcCCE
Confidence 4677788888888765322245566777889999999988763 4455677888887753234677888887 5699
Q ss_pred EEEeCCC---CCCCCeEEEEe---cChhhHHHHHHHHhhh
Q 014492 389 MIRHYNN---KELKGYVRVSV---GKPEHTDALMECLMHL 422 (423)
Q Consensus 389 ~v~~~~~---~~~~~~iRis~---~~~~~~~~l~~al~~l 422 (423)
.+++... +.+.+++||++ .+.++++++.++|+++
T Consensus 354 ~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~ 393 (402)
T TIGR01821 354 YVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLV 393 (402)
T ss_pred EEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 9987543 23457999998 4667777777777653
No 139
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.96 E-value=3.5e-28 Score=240.15 Aligned_cols=318 Identities=18% Similarity=0.197 Sum_probs=219.6
Q ss_pred CCCCCeeEcCCC--CCCCCC-CHHHHHHHhcC-CC----CCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492 92 RKPEDIVKIDAN--ENPYGP-PPEVREALGQL-KF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (423)
Q Consensus 92 ~~~~~~i~l~~~--~~~~~~-~~~v~~al~~~-~~----~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~ 163 (423)
.+++++||+..+ .+.+++ +|.+.+++.+. .. ...|+.+...++.+.++++.+. +++++++|+++++..++
T Consensus 36 ~dg~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~--~~v~~~~gg~eA~~~al 113 (396)
T PRK02627 36 DDGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLIHTSNLYYIEPQEELAEKLVELSGM--DKVFFCNSGAEANEAAI 113 (396)
T ss_pred CCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhcCC--CEEEECCCcHHHHHHHH
Confidence 456788999876 445666 58888888762 21 1335555566788888887664 79999999999999999
Q ss_pred HHhcCCC-------CeEEEcCCCchhhHHHHHHCCCeE-E---EecCCCCC----CCCHHHHHHHhhcCCceEEEEcCCC
Q 014492 164 RCVLDPG-------DKIVDCPPTFTMYEFDAAVNGAAV-V---KVPRKSDF----SLNVELIADAVEREKPKCIFLTSPN 228 (423)
Q Consensus 164 ~~l~~~g-------d~Vl~~~p~y~~~~~~~~~~g~~~-~---~v~~~~~~----~~d~~~l~~~i~~~~~~~i~l~~p~ 228 (423)
+.+...+ ++|++..++|+.+...+...+... . ..+...++ ..|++++++.+. +++++|++++++
T Consensus 114 ~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~-~~~~~vii~p~~ 192 (396)
T PRK02627 114 KLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPFNDIEALKAAIT-DKTAAVMLEPIQ 192 (396)
T ss_pred HHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeCCCCHHHHHHhcC-CCeEEEEEeccc
Confidence 9665433 679999999987765554433222 1 11221221 228999999996 689999999999
Q ss_pred CCcC-cCCCHHHHHHHHcC----CCEEEEccCCccccCCCch--hhhhccCCcEEEEccChhhhcccCccccccccCHHH
Q 014492 229 NPDG-SIINDEDLLKILEM----PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI 301 (423)
Q Consensus 229 NPtG-~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~ 301 (423)
||+| .+++.+.+++|.+. |+++|+||+|.+|...+.. ....+..++ +.||||.++ +|+|+||+++++++
T Consensus 193 ~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~~~~~~~~~pd---i~t~sK~~~-~G~rig~~~~~~~~ 268 (396)
T PRK02627 193 GEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLFAYQHYGIEPD---IMTLAKGLG-GGVPIGAVLAKEKV 268 (396)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCceeeehhcCCCCC---EEEEcchhh-CCcccEEEEEcHHH
Confidence 9999 67787766666553 9999999999987643321 112222233 346999999 99999999999999
Q ss_pred HHHHHHh--cCCCCCcHHHHHHHHHHhCCh---HHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCH
Q 014492 302 IEYLWRA--KQPYNVSVAAEVAACAALQNP---IYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDA 376 (423)
Q Consensus 302 ~~~l~~~--~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~ 376 (423)
++.+... ...++.+++.+.++.++|+.. ++.+..++..+..++.+.+.+.+.+.+...++.|.|+|++++ .+.
T Consensus 269 ~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~i~~~--~~~ 346 (396)
T PRK02627 269 ADVFTPGDHGSTFGGNPLACAAALAVIEIIEEEGLLENAAEVGEYLRAKLRELLEKYPGIKEVRGLGLMIGIELD--RPA 346 (396)
T ss_pred HhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCeeeeccCcEEEEEEec--CcH
Confidence 8887643 345778999999999888642 333444444444444444444444444334567899999983 467
Q ss_pred HHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 377 KKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 377 ~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.++++.|.++||.+.+++ .+++||+++...+.+++.+++++|
T Consensus 347 ~~~~~~l~~~Gv~v~~~~----~~~lRi~~~~~~~~~~i~~~~~~l 388 (396)
T PRK02627 347 AEIVKKALEKGLLINVTG----DNVLRLLPPLIISKEEIDEAVDRL 388 (396)
T ss_pred HHHHHHHHHCCeEEeecC----CCEEEEECCcccCHHHHHHHHHHH
Confidence 899999998999999865 478999875222235555555544
No 140
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.96 E-value=1.1e-27 Score=212.46 Aligned_cols=316 Identities=18% Similarity=0.216 Sum_probs=221.4
Q ss_pred eeEcCCCCCCCCCCHHHHHHHhc----C-------CCCCCCCCc-chHHHHHHHHHHh------CCCCCcEEEeCCHHHH
Q 014492 97 IVKIDANENPYGPPPEVREALGQ----L-------KFPYIYPDP-ESRRLRAALAKDS------GLESDHILVGCGADEL 158 (423)
Q Consensus 97 ~i~l~~~~~~~~~~~~v~~al~~----~-------~~~~~Y~~~-g~~~lr~~ia~~~------g~~~~~i~~t~G~~~a 158 (423)
.|.|+.|.+.- -|++.+.+++ + .....|..+ |...|.+++++++ ++++++|.+|+|++.+
T Consensus 32 ~imLggGNPa~--iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~~NIalTnGSQs~ 109 (417)
T COG3977 32 AIMLGGGNPAR--IPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITAQNIALTNGSQSA 109 (417)
T ss_pred ceeeCCCCccc--ChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCccceeeecCCccch
Confidence 57777654432 3555554433 1 112567544 7888888888875 4688999999999999
Q ss_pred HHHHHHHhcCC---C--CeEEE-cCCCchhhHHHHHHCCCeEEEecC-----C---CCCCCCHHHHHHHhhcCCceEEEE
Q 014492 159 IDLIMRCVLDP---G--DKIVD-CPPTFTMYEFDAAVNGAAVVKVPR-----K---SDFSLNVELIADAVEREKPKCIFL 224 (423)
Q Consensus 159 l~~~~~~l~~~---g--d~Vl~-~~p~y~~~~~~~~~~g~~~~~v~~-----~---~~~~~d~~~l~~~i~~~~~~~i~l 224 (423)
..-++..+.+. | .+|+. ..|.|.+|....-.-. -.+.+.. + -.+.+|++++.- .+++.+|++
T Consensus 110 fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d-~fVs~kP~iel~~~g~FKY~vDF~~l~i---~e~~g~ic~ 185 (417)
T COG3977 110 FFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEED-LFVSAKPNIELLPAGQFKYHVDFEHLHI---GESTGAICV 185 (417)
T ss_pred HHHHHHHhcCccCCCcceeEeeccChhhccccccccCcc-ceeeccCCcccccccceeeccCHHHccc---ccccceEEe
Confidence 99999877432 3 24544 5889988776432211 1222221 1 124678777754 268899999
Q ss_pred cCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCchhhhh--ccCCcEEEEccChhhhcccCccccccccC
Q 014492 225 TSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWV--KKHDNLIVLRTFSKRAGLAGLRVGYGAFP 298 (423)
Q Consensus 225 ~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~~~~~--~~~~~~i~i~S~SK~~g~~G~R~G~i~~~ 298 (423)
+.|.||||.+++.+|+.+|... |+.+|+|.+|..-..+- ..... --.+|++.|.|+|| .|+||.|+|.++++
T Consensus 186 SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~i-ifsd~~~~w~~NiilC~SLSK-~GLPG~R~GIiIan 263 (417)
T COG3977 186 SRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGI-IFSDATPLWNENIILCMSLSK-LGLPGSRCGIIIAN 263 (417)
T ss_pred cCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCce-ecccccccCCCCEEEEeehhh-cCCCCcceeEEEcc
Confidence 9999999999999999887664 99999999998422110 01111 12689999999999 79999999999999
Q ss_pred HHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHH---HHH-HHHHHHHHH----HHHHHHccCCCCeecCCCceEEEE
Q 014492 299 LSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYL---EKV-KEALIKERE----RLFKLLKDVPFLNPYPSYSNFILC 368 (423)
Q Consensus 299 ~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~---~~~-~~~~~~~~~----~l~~~L~~~~~~~~~p~~~~~~~~ 368 (423)
+++++.+...... ..++...++.+..+++..+.+ +++ +-.|+++.+ .+++.|.+.++....|+++.|+|+
T Consensus 264 e~viqaitnmn~iisLap~~~G~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~~~~~iHkpEGAIFlWL 343 (417)
T COG3977 264 EKVIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLPEYRCLIHKPEGAIFLWL 343 (417)
T ss_pred HHHHHHHHhccceeeecCCCccHHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhcCccceeeecCCcceeehh
Confidence 9999999877654 345667888888889876542 222 223334444 444555556666678999999998
Q ss_pred EeCC-CCCHHHHHHHHHhCCcEEEeCCC---------CCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 369 EVTS-GMDAKKLKDDLAKMGVMIRHYNN---------KELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 369 ~~~~-~~~~~~l~~~L~~~gI~v~~~~~---------~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.+.+ +++..+++++|++.||++.||.. +....|+|+++...+ ++++.++.+|
T Consensus 344 Wf~dLPItt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~~~~~--~~ie~Gva~l 405 (417)
T COG3977 344 WFKDLPITTEELYQRLKARGVLMVPGHYFFPGLDKEWPHTHQCMRMNYVPEP--EKIEKGVAIL 405 (417)
T ss_pred hhccCCCCHHHHHHHHHhCeEEEecccccCCCCCCCCCCccceEEEecCCCH--HHHHHHHHHH
Confidence 8864 67899999999999999999876 233569999998654 4566666554
No 141
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.96 E-value=3.6e-27 Score=231.67 Aligned_cols=318 Identities=19% Similarity=0.188 Sum_probs=229.5
Q ss_pred CCCeeEcCCCCCCCCCCHHHHHHHhcCCCC--------CCCC---CcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492 94 PEDIVKIDANENPYGPPPEVREALGQLKFP--------YIYP---DPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (423)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~~~~~--------~~Y~---~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~ 162 (423)
.+++|+++--.-.-+.++.+++++.+.... +++. .+...++|+.+|+++|.+ ++++++|+++++..+
T Consensus 17 ~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~~--~~~~~~g~t~a~~~a 94 (387)
T PRK09331 17 EEEFINLDPIQRGGILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLGMD--EARVTHGAREGKFAV 94 (387)
T ss_pred cccccccChhhcCCCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHH
Confidence 356788876544445678888888763211 1111 224679999999999974 578899999999999
Q ss_pred HHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC--CCCCCCCHHHHHHHhhc------CCceEEEEcCCCCCcCcC
Q 014492 163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER------EKPKCIFLTSPNNPDGSI 234 (423)
Q Consensus 163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~------~~~~~i~l~~p~NPtG~~ 234 (423)
+.+++++||+|+++.++|......++..|++++.+|. ++++.+|++++++.+.+ +++++|++++|+||||.+
T Consensus 95 l~~l~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~ 174 (387)
T PRK09331 95 MHSLCKKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNL 174 (387)
T ss_pred HHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCccc
Confidence 9999999999999999988776678889999999997 66788999999999863 278999999999999999
Q ss_pred CCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCC
Q 014492 235 INDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN 313 (423)
Q Consensus 235 ~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~ 313 (423)
.+.+++.++|+. |+++|+|++|+........ ...+..+++.|++|.++ .+.|+||+++++++++.+.+...++.
T Consensus 175 ~~l~~I~~la~~~g~~livD~a~~~g~~~~~~----~~~g~D~~~~s~~K~l~-~~~~~G~l~~~~~~i~~~~~~~~~~~ 249 (387)
T PRK09331 175 ADAKKVAKVAHEYGIPFLLNGAYTVGRMPVDG----KKLGADFIVGSGHKSMA-ASAPSGVLATTEEYADKVFRTSRKFG 249 (387)
T ss_pred ccHHHHHHHHHHcCCEEEEECCcccCCcCCCH----HHcCCCEEEeeCccccc-CCCCEEEEEECHHHHhhcccccCCCc
Confidence 999999999997 9999999999843221111 12345688999999987 56689999999998888766433221
Q ss_pred ----------CcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeec---CCCceEEEEEeCC-------
Q 014492 314 ----------VSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPY---PSYSNFILCEVTS------- 372 (423)
Q Consensus 314 ----------~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~---p~~~~~~~~~~~~------- 372 (423)
.+.....++.++++. .+.. +..++..++.+++.+.|++++++.+. ++..+++.++.|.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~aal~~~~~~~-~~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~~~i~~~~~~~~~~~~~~ 328 (387)
T PRK09331 250 VKEVELLGCTLRGAPLVTLMASFPHVVERV-KRWDEEVKKARWFVDELEKIEGFKQLGEKPRNHDLMKFETPSFDEIAKK 328 (387)
T ss_pred ccceeeeceecCchHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCCEEEeccCcCcCCeEEEeCCchhHHhhh
Confidence 211122222333322 1222 23445567788999999999666655 4456677677651
Q ss_pred -CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEe-c-ChhhHHHHHHHHhhh
Q 014492 373 -GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSV-G-KPEHTDALMECLMHL 422 (423)
Q Consensus 373 -~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~-~-~~~~~~~l~~al~~l 422 (423)
+.+..++.+.|.++||...+.+ ....+|+.. + +.++++++.++|+.+
T Consensus 329 ~~~~~~~~~~~L~~~gI~~~~~~---~~~i~ri~~~g~t~~di~~l~~aL~~i 378 (387)
T PRK09331 329 HKRRGFFLYEELKKRGIHGIKPG---ATKEFKLSTYGLTWEQVEYVADAFKEI 378 (387)
T ss_pred ccccchhHHHHHHHcCceEEccC---CceEEEEEeccCCHHHHHHHHHHHHHH
Confidence 1234568999999999844322 245677776 4 666777787777654
No 142
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.96 E-value=7e-28 Score=236.74 Aligned_cols=314 Identities=19% Similarity=0.198 Sum_probs=225.4
Q ss_pred EcCCCCCCCCCCHHHHHHHhcC-CC----C---CCCCCcchHHHHHHHHHHh---CC-CCCcEEEeCCHHHHHHHHHHHh
Q 014492 99 KIDANENPYGPPPEVREALGQL-KF----P---YIYPDPESRRLRAALAKDS---GL-ESDHILVGCGADELIDLIMRCV 166 (423)
Q Consensus 99 ~l~~~~~~~~~~~~v~~al~~~-~~----~---~~Y~~~g~~~lr~~ia~~~---g~-~~~~i~~t~G~~~al~~~~~~l 166 (423)
+|+.+.... +++.+++++.+. .. . +.|+..+...++++++++. +. ++++|++|+|+++++..+++++
T Consensus 2 yld~aa~~~-~~~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~~~~~~ 80 (382)
T TIGR03403 2 YLDNNATTM-LDPKVKELMDPFFCDIYGNPNSLHQFGTATHPAIAEALDKLYKGINARDLDDIIITSCATESNNWVLKGV 80 (382)
T ss_pred cccCcCCCC-CCHHHHHHHHHHHHhcCcCCccccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHH
Confidence 455554443 457788888652 11 1 2244444566777776665 44 6789999999999999999876
Q ss_pred c-----CC-CCeEEEcCCCchhhHH---HHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCH
Q 014492 167 L-----DP-GDKIVDCPPTFTMYEF---DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND 237 (423)
Q Consensus 167 ~-----~~-gd~Vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~ 237 (423)
. ++ +++|++....|+.+.. .++..|++++.+|.++++.+|++++++.+. ++++++++++|+||||.++|.
T Consensus 81 ~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~~g~~d~~~l~~~i~-~~t~lv~~~~~~n~tG~~~~~ 159 (382)
T TIGR03403 81 YFDEILKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINEQGTITAEQVREAIT-EKTALVSVMWANNETGMIFPI 159 (382)
T ss_pred HHhhcccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCCCCCCCHHHHHHhcc-cCCeEEEEEcccCCCccccCH
Confidence 2 45 4689988877765443 345689999999987777899999999997 688999999999999999999
Q ss_pred HHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHH--HHH-----HHhc
Q 014492 238 EDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII--EYL-----WRAK 309 (423)
Q Consensus 238 ~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~--~~l-----~~~~ 309 (423)
+++.++++. |+++++|+++..... ... +...+-.+++.|++|.+|.+| +|+++.+++.. ..+ ....
T Consensus 160 ~~I~~la~~~g~~~ivD~a~~~g~~---~~~-~~~~~~D~~~~s~~K~~gp~G--~g~l~vr~~~~~~p~~~g~~~~~~~ 233 (382)
T TIGR03403 160 KEIGEICKERGVLFHTDAVQAIGKI---PVD-VQKAGVDFLSFSAHKFHGPKG--VGGLYIRKGVELTPLFHGGEHMGGR 233 (382)
T ss_pred HHHHHHHHHcCCEEEEechhhcCCC---ccC-ccccCCCEEEEcchhhCCCCc--eEEEEECCCCCCCCcccCCCCCCCc
Confidence 999999987 999999999873221 111 123334488899999887777 46665543220 000 0112
Q ss_pred CCCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCC----ceEEEEEeCCCCCHHHHHHHHH
Q 014492 310 QPYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSY----SNFILCEVTSGMDAKKLKDDLA 384 (423)
Q Consensus 310 ~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~----~~~~~~~~~~~~~~~~l~~~L~ 384 (423)
+.++++.+++.++..+++. .++++...++++++++++.+.|++++++.+.++. .+++.+.++ +.+..++...|.
T Consensus 234 ~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L~ 312 (382)
T TIGR03403 234 RSGTLNVPYIVAMGEAMRLANEYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIK-GVEGEAMLWDLN 312 (382)
T ss_pred ccCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEeC-CCCHHHHHHhhc
Confidence 3467888888777777764 3457778889999999999999988877765432 457777775 677888888888
Q ss_pred hCCcEEEeCCCC--------------C-----CCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 385 KMGVMIRHYNNK--------------E-----LKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 385 ~~gI~v~~~~~~--------------~-----~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
++||.++.|... + ..+.||+|+. +.+|.|++.++|+.
T Consensus 313 ~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~ 371 (382)
T TIGR03403 313 KAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKK 371 (382)
T ss_pred cCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHH
Confidence 999999965321 0 1367999986 56677777777654
No 143
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.96 E-value=2.4e-27 Score=231.90 Aligned_cols=311 Identities=13% Similarity=0.102 Sum_probs=228.3
Q ss_pred CCCCCCCHHHHHHHhcCCCCCCCCC--cchHHHHHHHHHHhCCCC--CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCC
Q 014492 104 ENPYGPPPEVREALGQLKFPYIYPD--PESRRLRAALAKDSGLES--DHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179 (423)
Q Consensus 104 ~~~~~~~~~v~~al~~~~~~~~Y~~--~g~~~lr~~ia~~~g~~~--~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~ 179 (423)
..|.++.+.+.+++...- .++.+. ....++|+.+++++|.++ +.|++++|+++++..++..+..+||.|++..++
T Consensus 11 pgP~~~~~~~~~a~~~~~-~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~~~~ 89 (368)
T PRK13479 11 PGPLTTSRTVREAMLRDW-GSWDDDFNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVPDNG 89 (368)
T ss_pred CCCCCCCHHHHHHhCCCC-CCCChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCC
Confidence 355667888999887632 222221 146789999999999864 468899999999999999999999999988887
Q ss_pred chhh--HHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-CCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccC
Q 014492 180 FTMY--EFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEA 255 (423)
Q Consensus 180 y~~~--~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Dea 255 (423)
|... ...++..|++++.+|.+.++.+|++++++.+.+ .+++++++++|+||||...|.+++.++|+. |+++|+|++
T Consensus 90 ~~~~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~~~~i~~l~~~~~~~livDa~ 169 (368)
T PRK13479 90 AYGARIAQIAEYLGIAHVVLDTGEDEPPDAAEVEAALAADPRITHVALVHCETTTGILNPLDEIAAVAKRHGKRLIVDAM 169 (368)
T ss_pred chHHHHHHHHHHcCCcEEEEECCCCCCCCHHHHHHHHHhCCCCcEEEEEcccCccccccCHHHHHHHHHHcCCEEEEEcc
Confidence 7654 467788999999999876678999999999863 357789999999999999999999999987 999999966
Q ss_pred CccccCCCchhhhhccCCcEEEEccChhhh-cccCccccccccCHHHHHHHHHhcCC-------------------CCCc
Q 014492 256 YTEFSGLESRMEWVKKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYLWRAKQP-------------------YNVS 315 (423)
Q Consensus 256 y~~~~~~~~~~~~~~~~~~~i~i~S~SK~~-g~~G~R~G~i~~~~~~~~~l~~~~~~-------------------~~~~ 315 (423)
+. +...+ .. +...+..+++.|++|.+ |.+| +||++++++.++.+.....+ ++++
T Consensus 170 ~~-~g~~~--~~-~~~~~~d~~v~s~~K~l~g~~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 243 (368)
T PRK13479 170 SS-FGAIP--ID-IAELGIDALISSANKCIEGVPG--FGFVIARRSELEACKGNSRSLSLDLYDQWAYMEKTGQWRFTPP 243 (368)
T ss_pred cc-cCCcc--cc-ccccCceEEEecCccccccCCC--ceEEEECHHHHHHhhcCCCCeeecHHHHHhhhcccCCCCCCCc
Confidence 53 43211 11 22333457778999964 6677 69999999988776543211 3556
Q ss_pred HHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCC--Cc-eEEEEEeCC--CCCHHHHHHHHHhCC
Q 014492 316 VAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPYPS--YS-NFILCEVTS--GMDAKKLKDDLAKMG 387 (423)
Q Consensus 316 ~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~--~~-~~~~~~~~~--~~~~~~l~~~L~~~g 387 (423)
...+.++.++++. ..++++.+++++++++++.+.|+++++....++ .. ..+.+.++. +.+..++.+.|.++|
T Consensus 244 ~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 323 (368)
T PRK13479 244 THVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRALGFEPLLDAEIQSPIIVTFHAPADPAYDFKEFYERLKEQG 323 (368)
T ss_pred HHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCcccCCchhcCceEEEEECCCCCCcCHHHHHHHHHHCC
Confidence 5655555555543 334678889999999999999998864332221 11 223344443 357789999999999
Q ss_pred cEEEeCCCCCCCCeEEEEe-c--ChhhHHHHHHHHhhh
Q 014492 388 VMIRHYNNKELKGYVRVSV-G--KPEHTDALMECLMHL 422 (423)
Q Consensus 388 I~v~~~~~~~~~~~iRis~-~--~~~~~~~l~~al~~l 422 (423)
|.++++... ..+++||+. + +.++++.+.++|+++
T Consensus 324 i~v~~g~~~-~~~~iRis~~~~~t~edi~~~l~~L~~~ 360 (368)
T PRK13479 324 FVIYPGKLT-QVDTFRIGCIGDVDAADIRRLVAAIAEA 360 (368)
T ss_pred EEEecCCCC-CCCEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 999887532 246899985 6 677777777777653
No 144
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.96 E-value=7.1e-28 Score=237.94 Aligned_cols=314 Identities=18% Similarity=0.191 Sum_probs=226.9
Q ss_pred CCCCCeeEcCCC--CCCCCC-CHHHHHHHhcC-CC----CCCCCCcchHHHHHHHHHHhCCC-CCcEEEeCCHHHHHHHH
Q 014492 92 RKPEDIVKIDAN--ENPYGP-PPEVREALGQL-KF----PYIYPDPESRRLRAALAKDSGLE-SDHILVGCGADELIDLI 162 (423)
Q Consensus 92 ~~~~~~i~l~~~--~~~~~~-~~~v~~al~~~-~~----~~~Y~~~g~~~lr~~ia~~~g~~-~~~i~~t~G~~~al~~~ 162 (423)
..+++++||..+ .+.++. +|++.+++.+. .. ...|+.+...++.+.++++++.+ ++++++++|+++++..+
T Consensus 40 ~dg~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sgsea~~~a 119 (398)
T PRK03244 40 VDGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVSNLFATEPQIALAERLVELLGAPEGGRVFFCNSGAEANEAA 119 (398)
T ss_pred CCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccCccCccCCHHHHHHHHHHHHhCCCCCCCEEEEeCchHHHHHHH
Confidence 457789999876 456666 68888888762 21 13476665678999999998853 47999999999999999
Q ss_pred HHHhcCCC-CeEEEcCCCchhhHHHHHH-CCC------------eEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCC
Q 014492 163 MRCVLDPG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPN 228 (423)
Q Consensus 163 ~~~l~~~g-d~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~ 228 (423)
++....+| +.|+..+++|+.+...+.. .|. ++..+|. .|++++++.+. .++++|+++.++
T Consensus 120 l~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~~~-~~~~aviiep~~ 193 (398)
T PRK03244 120 FKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY-----GDVDALAAAVD-DDTAAVFLEPIQ 193 (398)
T ss_pred HHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCC-----CCHHHHHHhhc-CCeEEEEEeccc
Confidence 99766666 5677778899866544332 222 2222221 37899999885 689999999999
Q ss_pred CCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCchh--hhhccCCcEEEEccChhhhcccCccccccccCHHH
Q 014492 229 NPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI 301 (423)
Q Consensus 229 NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~ 301 (423)
||+|.+++ .+++.++|+. |+++|+||+|..|...+... ...+..+++ .+|||.++ +|+|+||+++++++
T Consensus 194 ~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pDi---~t~sK~l~-~G~~ig~~~~~~~~ 269 (398)
T PRK03244 194 GEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGVTPDV---VTLAKGLG-GGLPIGACLAFGPA 269 (398)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHHhhhhhCCCCCE---EEEchhhh-CCcccEEEEEcHHH
Confidence 99999998 5677778876 99999999998775433322 111222333 37899999 89999999999998
Q ss_pred HHHHHHh--cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCC--CeecCCCceEEEEEeCCCCCHH
Q 014492 302 IEYLWRA--KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPF--LNPYPSYSNFILCEVTSGMDAK 377 (423)
Q Consensus 302 ~~~l~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~--~~~~p~~~~~~~~~~~~~~~~~ 377 (423)
++.+... ...|+.+++++.++.++|+.-+ -++..++++++++++.+.|++++. +....+.|+++|+.++. ..+.
T Consensus 270 ~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~v~g~g~~~~i~~~~-~~~~ 347 (398)
T PRK03244 270 ADLLTPGLHGSTFGGNPVACAAALAVLDTIA-SEGLLENAERLGEQLRAGIEALGHPLVDHVRGRGLLLGIVLTA-PVAK 347 (398)
T ss_pred HhhccCCCCcCCCCCCHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHhcCCCceeeEeeccEEEEEEEec-cHHH
Confidence 8877642 3347889999999999876311 124556677778888888887542 22334678999999963 3567
Q ss_pred HHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 378 KLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 378 ~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
.+.+.|.++||.+++.. .++|||+++ +.++++++.+++++
T Consensus 348 ~~~~~l~~~Gv~~~~~~----~~~iR~~p~~~~t~~~i~~~~~~l~~ 390 (398)
T PRK03244 348 AVEAAAREAGFLVNAVA----PDVIRLAPPLIITDAQVDAFVAALPA 390 (398)
T ss_pred HHHHHHHHCCeEEeecC----CCEEEEECCCcCCHHHHHHHHHHHHH
Confidence 88999999999998743 478999955 45555555555543
No 145
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.96 E-value=4.8e-27 Score=231.66 Aligned_cols=312 Identities=15% Similarity=0.070 Sum_probs=231.2
Q ss_pred CCCCCCCHHHHHHHhcCCCCCCCCCc--chHHHHHHHHHHhCCCC-CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCc
Q 014492 104 ENPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLES-DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF 180 (423)
Q Consensus 104 ~~~~~~~~~v~~al~~~~~~~~Y~~~--g~~~lr~~ia~~~g~~~-~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y 180 (423)
..|...++.+++++......++.+.. -..++++.+++++|.+. +.+++++|+++++..++..++++||+|++.++.|
T Consensus 15 pGP~~~~~~V~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~~~ 94 (401)
T PLN02409 15 PGPVNIPERVLRAMNRPNEDHRSPAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTLSPGDKVVSFRIGQ 94 (401)
T ss_pred CCCCCCCHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeCCCc
Confidence 34556678999998763332332221 25678888888899865 4678899999999999998999999999999888
Q ss_pred hhh--HHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc---CCceEEEEcCCCCCcCcCCCHHHHHHH--HcC-CCEEEE
Q 014492 181 TMY--EFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDEDLLKI--LEM-PILVVL 252 (423)
Q Consensus 181 ~~~--~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~~~l~~i--~~~-~~~li~ 252 (423)
... ...++..|++++.++.+.+..+|++++++.+++ +++++|++++++||||.++|.+++.++ ++. |+++|+
T Consensus 95 ~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vv 174 (401)
T PLN02409 95 FSLLWIDQMQRLNFDVDVVESPWGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLDCAQHPALLLV 174 (401)
T ss_pred hhHHHHHHHHHcCCceEEEECCCCCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHhhhccCcEEEE
Confidence 644 466778899999999776667899999999974 379999999999999999999999999 886 999999
Q ss_pred ccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC--------------------CC
Q 014492 253 DEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--------------------PY 312 (423)
Q Consensus 253 Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~--------------------~~ 312 (423)
|++++... ....+...+..+++.|.+|.++.| .++||++.+++.++++..... ++
T Consensus 175 D~v~s~g~----~~id~~~~~~D~~~~s~~K~l~~P-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 249 (401)
T PLN02409 175 DGVSSIGA----LDFRMDEWGVDVALTGSQKALSLP-TGLGIVCASPKALEASKTAKSPRVFFDWADYLKFYKLGTYWPY 249 (401)
T ss_pred EcccccCC----ccccccccCccEEEEcCccccCcC-CCcceeEECHHHHHHHhcCCCCCeecCHHHHHHHHhcCCCCCC
Confidence 99987321 111122344557888889988643 369999999998887653210 23
Q ss_pred CCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCC----CceEEEEEeCCCCCHHHHHHHHH-h
Q 014492 313 NVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPYPS----YSNFILCEVTSGMDAKKLKDDLA-K 385 (423)
Q Consensus 313 ~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~----~~~~~~~~~~~~~~~~~l~~~L~-~ 385 (423)
+++...+.++..+++. ...+++++++++++++++.+.|++++.....+. ....+++.+|++.+..++.+.|. +
T Consensus 250 Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g~~~~~~~~~~~s~~v~~~~~p~~~~~~~l~~~l~~~ 329 (401)
T PLN02409 250 TPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAWGLKLCTKKPEWRSDTVTAVVVPEGIDSAEIVKNAWKK 329 (401)
T ss_pred CccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcccceEEEeCCCCCCHHHHHHHHHHh
Confidence 5666667777777764 335788889999999999999988753222221 12345688888889899988886 7
Q ss_pred CCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHh
Q 014492 386 MGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLM 420 (423)
Q Consensus 386 ~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~ 420 (423)
+||.+..|......+.+||+.....+.+++...+.
T Consensus 330 ~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~ 364 (401)
T PLN02409 330 YNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALA 364 (401)
T ss_pred CCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHH
Confidence 89999988754346899999653333344444333
No 146
>PLN02242 methionine gamma-lyase
Probab=99.96 E-value=1.9e-27 Score=234.17 Aligned_cols=245 Identities=15% Similarity=0.146 Sum_probs=190.2
Q ss_pred CCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHH-----HHCCCeEEEecCC
Q 014492 126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA-----AVNGAAVVKVPRK 200 (423)
Q Consensus 126 Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~-----~~~g~~~~~v~~~ 200 (423)
++++...+|++.+++++|. +.+++++|+++++..++.+++++||.|+++.|.|..+...+ +..|++++.++.
T Consensus 73 ~~~Pt~~~LE~~lA~l~g~--~~~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~- 149 (418)
T PLN02242 73 HFNPTVLNLGRQMAALEGT--EAAYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVDI- 149 (418)
T ss_pred CCChhHHHHHHHHHHHhCC--CeEEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcCC-
Confidence 4678889999999999996 45678999999999999999999999999999998776543 347888887763
Q ss_pred CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEc
Q 014492 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR 279 (423)
Q Consensus 201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~ 279 (423)
.|++++++++++.++|+|++++|+||||.+.+.+++.++++. |++||+|++|..+...+. ..+.++++.
T Consensus 150 ----~d~e~l~~~i~~~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~~~~~~~~------~~g~divv~ 219 (418)
T PLN02242 150 ----TDLEAVKKAVVPGKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFAPMVLSPA------RLGADVVVH 219 (418)
T ss_pred ----CCHHHHHHhcCcCCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCCccCCCHH------HcCCcEEEE
Confidence 389999999973369999999999999999999999999987 999999999987654321 224569999
Q ss_pred cChhhhcccCcc-ccccccCHHHHHHHHHhcC----CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC
Q 014492 280 TFSKRAGLAGLR-VGYGAFPLSIIEYLWRAKQ----PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP 354 (423)
Q Consensus 280 S~SK~~g~~G~R-~G~i~~~~~~~~~l~~~~~----~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 354 (423)
|+||.++.+|.+ .||+++++++++.+.+... ..+.+...|.|+..++.. .++..+.++++++++++.+.|++++
T Consensus 220 S~SK~l~g~g~~~gG~iv~~~~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~l-~tl~~r~~~~~~~a~~la~~L~~~~ 298 (418)
T PLN02242 220 SISKFISGGADIIAGAVCGPAELVNSMMDLHHGALMLLGPTMNPKVAFELSERL-PHLSLRMKEHCRRAMEYAKRMKELG 298 (418)
T ss_pred eCccccCCCCCceEEEEEcCHHHHHHHHHHhhhhhhccCCCCCHHHHHHHHcCC-CcHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999888988 5999999999998886643 234444456666655543 3566677889999999999999886
Q ss_pred CCeecCC-------------------CceEEEEEeCCCCCHHHHHHHHH
Q 014492 355 FLNPYPS-------------------YSNFILCEVTSGMDAKKLKDDLA 384 (423)
Q Consensus 355 ~~~~~p~-------------------~~~~~~~~~~~~~~~~~l~~~L~ 384 (423)
....+|+ .|..+.+++.+...+..|++.|.
T Consensus 299 ~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l~~~~~~~~f~~~l~ 347 (418)
T PLN02242 299 LKVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDMDTEERANRLMRYLQ 347 (418)
T ss_pred CEEECCCCCCCccHHHHHHhcccCCCceeEEEEEECCHHHHHHHHHHhh
Confidence 4223342 24556777752223456666664
No 147
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=1.4e-26 Score=225.58 Aligned_cols=320 Identities=21% Similarity=0.244 Sum_probs=249.3
Q ss_pred CCCeeEcCCCCCCCCCCHHHHHHHhcC----C-CCC--CCCCc-----chHHHHHHHHHHhCCCC-CcEEEeCCHHHHHH
Q 014492 94 PEDIVKIDANENPYGPPPEVREALGQL----K-FPY--IYPDP-----ESRRLRAALAKDSGLES-DHILVGCGADELID 160 (423)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~~----~-~~~--~Y~~~-----g~~~lr~~ia~~~g~~~-~~i~~t~G~~~al~ 160 (423)
+.++++|++..... .|..+.+++.+. . ..+ .|+.. .+++.|+++++++|.++ ++|++|.|+|++++
T Consensus 20 ~~~~vylD~aa~~~-~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~aln 98 (405)
T COG0520 20 GKPLVYLDNAATSQ-KPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEALN 98 (405)
T ss_pred CCCeEEecCccccc-CCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhHHHH
Confidence 45679999877666 677888888752 1 112 12211 25689999999999985 89999999999999
Q ss_pred HHHHHh---cCCCCeEEEcCCCch----hhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCc
Q 014492 161 LIMRCV---LDPGDKIVDCPPTFT----MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS 233 (423)
Q Consensus 161 ~~~~~l---~~~gd~Vl~~~p~y~----~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~ 233 (423)
++..++ ..+||+|++..-.|+ ++...++..|++++.+|.++++.+|.++++..++ ++||+|.+++.+|.||.
T Consensus 99 ~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~~~~~~~i~-~~Tklvais~vSn~tG~ 177 (405)
T COG0520 99 LVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDLDALEKLIT-PKTKLVALSHVSNVTGT 177 (405)
T ss_pred HHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCCCCCcCHHHHHHhcC-CCceEEEEECccccccc
Confidence 999998 689999999999886 5666677789999999988888999999999887 79999999999999999
Q ss_pred CCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChh-hhcccCccccccccCHHHHHHHHHhcC-
Q 014492 234 IINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSK-RAGLAGLRVGYGAFPLSIIEYLWRAKQ- 310 (423)
Q Consensus 234 ~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK-~~g~~G~R~G~i~~~~~~~~~l~~~~~- 310 (423)
+.|.++|.++++. |+++++|.+++-.. ....+...+.+++..|.+| .+|..| +|++++++++++.+.....
T Consensus 178 ~~pv~~I~~la~~~ga~v~VDaaq~~~h----~~idv~~l~~Df~afsgHKwl~gP~G--iGvLy~r~~~l~~l~P~~~g 251 (405)
T COG0520 178 VNPVKEIAELAHEHGALVLVDAAQAAGH----LPIDVQELGCDFLAFSGHKWLLGPTG--IGVLYVRKELLEELEPFLGG 251 (405)
T ss_pred cchHHHHHHHHHHcCCEEEEECccccCc----cCCCchhcCCCEEEEcccccccCCCc--eEEEEEchHHHhhcCCcccC
Confidence 9999999999998 99999999988322 2222345566799999999 566446 7999999999988732110
Q ss_pred -----------------------CCCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeec-CC---
Q 014492 311 -----------------------PYNVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPY-PS--- 361 (423)
Q Consensus 311 -----------------------~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~--- 361 (423)
..+++.....++.++++- ...++++.++.+++.+++.+.|++++.+.++ |.
T Consensus 252 g~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~ 331 (405)
T COG0520 252 GGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSELPGVEIYGPPDAD 331 (405)
T ss_pred CCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCccc
Confidence 013344444444455543 1236788899999999999999999987753 32
Q ss_pred CceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC--------CCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492 362 YSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK--------ELKGYVRVSVG---KPEHTDALMECLMHL 422 (423)
Q Consensus 362 ~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~--------~~~~~iRis~~---~~~~~~~l~~al~~l 422 (423)
.+..+.+.++ +.++.++...|.++||.++.+... ..++.+|+|+. +.+|.|+|.++|+++
T Consensus 332 r~~~vsF~v~-~~~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid~l~~aL~~~ 402 (405)
T COG0520 332 RGGIVSFNVK-GIHPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEEDVDRLLEALKKA 402 (405)
T ss_pred CceEEEEEeC-CCCHHHHHHHHHhCCeEEEeccccccHHHHhcCCCCceEEEEeecCCHHHHHHHHHHHHHH
Confidence 4667777886 778999999999999999987542 22456999975 788899999998875
No 148
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.96 E-value=5.5e-27 Score=232.05 Aligned_cols=316 Identities=17% Similarity=0.159 Sum_probs=222.8
Q ss_pred eeEcCCCCCCCCCCHHHHHHHhcCC---CC------CCC-CCcchHHHHH----HHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492 97 IVKIDANENPYGPPPEVREALGQLK---FP------YIY-PDPESRRLRA----ALAKDSGLESDHILVGCGADELIDLI 162 (423)
Q Consensus 97 ~i~l~~~~~~~~~~~~v~~al~~~~---~~------~~Y-~~~g~~~lr~----~ia~~~g~~~~~i~~t~G~~~al~~~ 162 (423)
.+.|..+++.. +|.+++++.... +. ..| +..+.+.+++ .+++++|.+..+|++++| ++++..+
T Consensus 21 ~~~~~~~~~~~--~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~v~~~sg-t~a~~~~ 97 (402)
T cd00378 21 TLELIASENFT--SPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYANVQPHSG-SQANLAV 97 (402)
T ss_pred CeeeeccCCcC--CHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCceeeecCCc-HHHHHHH
Confidence 58887777766 689999997621 11 123 2233445554 466788987666766655 6899999
Q ss_pred HHHhcCCCCeEEEcCCCchhhHHH-----HHHCCCeEEEecCCC---CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcC
Q 014492 163 MRCVLDPGDKIVDCPPTFTMYEFD-----AAVNGAAVVKVPRKS---DFSLNVELIADAVEREKPKCIFLTSPNNPDGSI 234 (423)
Q Consensus 163 ~~~l~~~gd~Vl~~~p~y~~~~~~-----~~~~g~~~~~v~~~~---~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~ 234 (423)
+.+++++||+|++++|+|..+... ++..|.++..++.+. ++.+|++++++.+.+.+++++++++|+|| ..
T Consensus 98 l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~~v~~~~~~~~--~~ 175 (402)
T cd00378 98 YFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEFKPKLIVAGASAYP--RP 175 (402)
T ss_pred HHHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhCCCCEEEecCcccC--CC
Confidence 999999999999999999765432 556788777776432 68999999999996568999999998875 56
Q ss_pred CCHHHHHHHHcC-CCEEEEccCC-ccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCH-HHHHHHHHhcCC
Q 014492 235 INDEDLLKILEM-PILVVLDEAY-TEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWRAKQP 311 (423)
Q Consensus 235 ~~~~~l~~i~~~-~~~li~Deay-~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~-~~~~~l~~~~~~ 311 (423)
.+.+++.++|+. |+++|+|++| .++.+.+.....+. ...++++|+||.+ +|.|.||+++++ ++++++.+...+
T Consensus 176 ~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~--~~dv~~~s~sK~l--~G~~gg~i~~~~~~~~~~l~~~~~~ 251 (402)
T cd00378 176 IDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP--GADVVTTTTHKTL--RGPRGGLILTRKGELAKKINSAVFP 251 (402)
T ss_pred cCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc--CCcEEEeccccCC--CCCCceEEEeccHHHHHHHHHHhCc
Confidence 789999999987 9999999996 43332221111122 2237899999975 789999999977 888888776554
Q ss_pred CC--Cc-HHHHHHHHHHhCC-h-HHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCC-CCCHHHHHHHHH
Q 014492 312 YN--VS-VAAEVAACAALQN-P-IYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS-GMDAKKLKDDLA 384 (423)
Q Consensus 312 ~~--~~-~~~~~a~~~~l~~-~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~-~~~~~~l~~~L~ 384 (423)
+. .+ ...+.++..++.. . .+.++.+++++++++++.+.|++.++... .|.+++|+|+++++ +.+...+.+.|.
T Consensus 252 ~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~l~ 331 (402)
T cd00378 252 GLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKERGFKVVSGGTDNHLVLVDLRPKGITGKAAEDALE 331 (402)
T ss_pred cccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEeecCCCCeEEEEeCCccCCCHHHHHHHHH
Confidence 32 22 2233333333332 2 25677888899999999999998864322 45689999999973 456677788788
Q ss_pred hCCcEEEeCCCC------CCCCeEEEEecC-------hhhHHHHHHHHhh
Q 014492 385 KMGVMIRHYNNK------ELKGYVRVSVGK-------PEHTDALMECLMH 421 (423)
Q Consensus 385 ~~gI~v~~~~~~------~~~~~iRis~~~-------~~~~~~l~~al~~ 421 (423)
++||.+.+...+ ...+++||++.. .++++.+.+.|++
T Consensus 332 ~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~ 381 (402)
T cd00378 332 EAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIAR 381 (402)
T ss_pred HcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHH
Confidence 999999853221 135689999854 5566666666655
No 149
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.96 E-value=4.4e-27 Score=230.72 Aligned_cols=317 Identities=20% Similarity=0.205 Sum_probs=227.9
Q ss_pred eEcCCCCCCCCCCHHHHHHHhcC-C-C--C---CCCCC-----cchHHHHHHHHHHhCCCC-CcEEEeCCHHHHHHHHHH
Q 014492 98 VKIDANENPYGPPPEVREALGQL-K-F--P---YIYPD-----PESRRLRAALAKDSGLES-DHILVGCGADELIDLIMR 164 (423)
Q Consensus 98 i~l~~~~~~~~~~~~v~~al~~~-~-~--~---~~Y~~-----~g~~~lr~~ia~~~g~~~-~~i~~t~G~~~al~~~~~ 164 (423)
++|+.+.+++++|+.+.+++.+. . . . ..|+. ....++|+.+++++|.+. ++|++|+|+++++.+++.
T Consensus 1 ~yld~a~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~ 80 (376)
T TIGR01977 1 IYFDNAATTYPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALK 80 (376)
T ss_pred CCccCcccCCCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHH
Confidence 36788888888888888887652 1 1 1 12432 345689999999999854 589999999999999999
Q ss_pred HhcCCCCeEEEcCCCchhhH----HHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHH
Q 014492 165 CVLDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL 240 (423)
Q Consensus 165 ~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l 240 (423)
+++++||+|++..++|..+. ..++..|++++.++.+.++.+|++++++.++ ++++++++++|+||||.+++.+++
T Consensus 81 ~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~-~~~~~v~~~~~~n~tG~~~~~~~i 159 (376)
T TIGR01977 81 GLLKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDNEGLISPERIKRAIK-TNTKLIVVSHASNVTGTILPIEEI 159 (376)
T ss_pred hccCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHhcC-CCCeEEEEECCCCCccccCCHHHH
Confidence 99999999999999997643 3455679999999977777899999999996 689999999999999999999999
Q ss_pred HHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHH-HHHHHHh----------
Q 014492 241 LKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI-IEYLWRA---------- 308 (423)
Q Consensus 241 ~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~-~~~l~~~---------- 308 (423)
.++|+. |+++|+|++++.....- .+...+..+++.|++|.++.|. .+|.++..++. ++.+...
T Consensus 160 ~~l~~~~~~~livD~a~~~g~~~~----~~~~~~~D~~~~s~~K~l~~p~-g~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 234 (376)
T TIGR01977 160 GELAQENGIFFILDAAQTAGVIPI----DMTELAIDMLAFTGHKGLLGPQ-GTGGLYIREGIKLKPLKSGGTGSHSALID 234 (376)
T ss_pred HHHHHHcCCEEEEEhhhccCccCC----CchhcCCCEEEecccccccCCC-CceEEEEcCCcCcCceecCCCcccccccc
Confidence 999987 99999999997543211 1123345588899999765332 25666554432 1111100
Q ss_pred --------cCCCCCcHHHHHHHHHHhCCh--HHHHHHHHHHHHHHHHHHHHHccCCCCeecCC-----CceEEEEEeCCC
Q 014492 309 --------KQPYNVSVAAEVAACAALQNP--IYLEKVKEALIKERERLFKLLKDVPFLNPYPS-----YSNFILCEVTSG 373 (423)
Q Consensus 309 --------~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~-----~~~~~~~~~~~~ 373 (423)
....+.+.....++..+++.- ...+.++++.+++.+++.+.|.+++++.+... .+..+++.++ +
T Consensus 235 ~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~-~ 313 (376)
T TIGR01977 235 QPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVSFTVE-G 313 (376)
T ss_pred ccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEEEEEC-C
Confidence 011234555555555555431 22456778888999999999988776654321 2567778886 5
Q ss_pred CCHHHHHHHHHhC-CcEEEeCCCC----------CCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 374 MDAKKLKDDLAKM-GVMIRHYNNK----------ELKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 374 ~~~~~l~~~L~~~-gI~v~~~~~~----------~~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
.+.+++.+.|.++ ||.++.+... ...+.|||++. +.++.+.+.++|+.
T Consensus 314 ~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 314 IDSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred CCHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 6888999999866 9999876531 13579999986 45555666665554
No 150
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.96 E-value=1.8e-27 Score=236.30 Aligned_cols=324 Identities=19% Similarity=0.172 Sum_probs=225.3
Q ss_pred CCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-CCCCCCCCCc-----chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492 92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFPYIYPDP-----ESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (423)
Q Consensus 92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~~~Y~~~-----g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~ 162 (423)
..++++|||..| ...++ .+|.+.+++.+ +.....|+.. ...++++.++++++.+.+++++++|+++++..+
T Consensus 33 ~dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgsea~~~a 112 (413)
T cd00610 33 VDGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTHFSLGFFYNEPAVELAELLLALTPEGLDKVFFVNSGTEAVEAA 112 (413)
T ss_pred CCCCEEEEcCccHHhhccCCCCHHHHHHHHHHHHhCcCccCcccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHH
Confidence 356789999876 55677 78899888876 3333344432 356899999999998788999999999999999
Q ss_pred HHHhc--CCCCeEEEcCCCchhhHHHHHH-CC------------CeEEEecCCC------CCCCCHHHHHHHhhc--CCc
Q 014492 163 MRCVL--DPGDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKS------DFSLNVELIADAVER--EKP 219 (423)
Q Consensus 163 ~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g------------~~~~~v~~~~------~~~~d~~~l~~~i~~--~~~ 219 (423)
++.+. .+++.|++.+++|+........ .+ .+++.+|.++ ++..|++.+++.+.+ .++
T Consensus 113 l~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~ 192 (413)
T cd00610 113 LKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEV 192 (413)
T ss_pred HHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCE
Confidence 99763 5689999999999865443332 21 2356666442 234489999999874 356
Q ss_pred eEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccc
Q 014492 220 KCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGY 294 (423)
Q Consensus 220 ~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~ 294 (423)
++++++..+|++|.+++ .+++.++|+. |+++|+||+|..+...+.... ....+...-+.|+||.++ .|+|+||
T Consensus 193 ~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~~-~~~~~~~~d~~t~sK~l~-~g~~~g~ 270 (413)
T cd00610 193 AAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMFA-FEHFGVEPDIVTLGKGLG-GGLPLGA 270 (413)
T ss_pred EEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhh-HhhcCCCCCeEEEccccc-CccccEE
Confidence 77777777788899886 5666666665 999999999997743222111 111111112458899998 5899999
Q ss_pred cccCHHHHHHH--HHhc--CCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccC----CCCeecCCCceEE
Q 014492 295 GAFPLSIIEYL--WRAK--QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDV----PFLNPYPSYSNFI 366 (423)
Q Consensus 295 i~~~~~~~~~l--~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~p~~~~~~ 366 (423)
+++++++++.+ .... ..++.+++++.++.++|+..+. ++..++++++.+++.+.|+++ +......+.|.++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~ 349 (413)
T cd00610 271 VLGREEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEE-EGLLENAAELGEYLRERLRELAEKHPLVGDVRGRGLMI 349 (413)
T ss_pred EEEcHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhhCCcEEEeecCceEE
Confidence 99999999886 2222 2357788888888877753211 345667777777777777654 2222234567888
Q ss_pred EEEeCCC--------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 367 LCEVTSG--------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 367 ~~~~~~~--------~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
++.+++. .....+.+.|.++||.+.+++ .+++|++++...+.+++.++++++
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~----~~~lR~~~~~~~t~~~i~~~~~~l 409 (413)
T cd00610 350 GIELVKDRATKPPDKELAAKIIKAALERGLLLRPSG----GNVIRLLPPLIITEEEIDEGLDAL 409 (413)
T ss_pred EEEEecCCCcCCcchHHHHHHHHHHHHCCeEEeecC----CCEEEEECCCcCCHHHHHHHHHHH
Confidence 8888643 356778899999999999975 578999887543335555555543
No 151
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.96 E-value=2.3e-26 Score=225.32 Aligned_cols=282 Identities=19% Similarity=0.193 Sum_probs=215.0
Q ss_pred hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhc------CCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCC
Q 014492 131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL------DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFS 204 (423)
Q Consensus 131 ~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~------~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~ 204 (423)
..++++.+++++|++++++++++|+++++..++.++. ++||+|+++.++|..+...++..|++++.++.+.++.
T Consensus 61 ~~~~~~~la~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~~~~~ 140 (373)
T TIGR03812 61 EEEVVGSLGNLLHLPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFEKAAEMLGLELRYAPLDEDYT 140 (373)
T ss_pred HHHHHHHHHHHhCCCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHHHHHHHcCCeEEEEeeCCCCC
Confidence 3689999999999988889999999999988877654 4678999999999999999999999999999877788
Q ss_pred CCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCC-----Cc--hhhhhccCCcEE
Q 014492 205 LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGL-----ES--RMEWVKKHDNLI 276 (423)
Q Consensus 205 ~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~-----~~--~~~~~~~~~~~i 276 (423)
+|++++++.+. +++..+++.+|+||||.+.+.+++.++++. |+++|+|++|..+... .. ... .....-..
T Consensus 141 ~d~~~l~~~l~-~~~~~vv~~~~~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d-~~~~~~d~ 218 (373)
T TIGR03812 141 VDVKDVEDLID-DNTIGIVGIAGTTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFD-FSLPGVQS 218 (373)
T ss_pred cCHHHHHHHHh-hCcEEEEEECCCCCCCccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCcc-ccCCCCCE
Confidence 99999999996 455545545589999999999999999987 9999999999855310 00 000 00111224
Q ss_pred EEccChhhhcccCccccccc-cCHHHHHHHHHhcCCC-----------CCcHHHHHHHHHHhCC--hHHHHHHHHHHHHH
Q 014492 277 VLRTFSKRAGLAGLRVGYGA-FPLSIIEYLWRAKQPY-----------NVSVAAEVAACAALQN--PIYLEKVKEALIKE 342 (423)
Q Consensus 277 ~i~S~SK~~g~~G~R~G~i~-~~~~~~~~l~~~~~~~-----------~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~ 342 (423)
+..|.+| |++++.|.|+++ .++++++.+.. ..+| +.+.....++..+++. .+.+++..+++.++
T Consensus 219 ~~~s~~K-~~~~~~~~G~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~ 296 (373)
T TIGR03812 219 ITIDPHK-MGLSPIPAGGILFRSKSYLKYLSV-DAPYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMEN 296 (373)
T ss_pred EEECccc-cCCCcCCceEEEEeCHHHHhhhcc-cCcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 4567789 777888888655 57788776642 2222 2334556666666654 45567888999999
Q ss_pred HHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHH
Q 014492 343 RERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECL 419 (423)
Q Consensus 343 ~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al 419 (423)
++++.+.|+++++..+.++..+++.++++ +..++.+.|.++||.++.+. .++++||+++ +.++++++.++|
T Consensus 297 ~~~l~~~L~~~g~~~~~~~~~~~v~~~~~---~~~~v~~~L~~~gi~v~~~~---~~~~iRis~~~~~t~edid~l~~~L 370 (373)
T TIGR03812 297 TRYLVEELKKIGFEPVIEPVLNIVAFEVD---DPEEVRKKLRDRGWYVSVTR---CPKALRIVVMPHVTREHIEEFLEDL 370 (373)
T ss_pred HHHHHHHHHhCCCeEEcCCCceEEEEEeC---CHHHHHHHHHHCCceeccCC---CCCEEEEEEECCCCHHHHHHHHHHH
Confidence 99999999998765555667788888886 35689999999999998753 3579999986 677788888887
Q ss_pred hhh
Q 014492 420 MHL 422 (423)
Q Consensus 420 ~~l 422 (423)
++|
T Consensus 371 ~~~ 373 (373)
T TIGR03812 371 KEI 373 (373)
T ss_pred hhC
Confidence 754
No 152
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.96 E-value=1.9e-26 Score=212.65 Aligned_cols=332 Identities=19% Similarity=0.270 Sum_probs=246.2
Q ss_pred CCCchHHHHHHhCCCC-CCeeEcCCC--CCCCCC---CHHHHHHHhcC---CCCCCC-CCcchHHHHHHHHHHh-C----
Q 014492 79 PILPFEVLSIQLGRKP-EDIVKIDAN--ENPYGP---PPEVREALGQL---KFPYIY-PDPESRRLRAALAKDS-G---- 143 (423)
Q Consensus 79 ~~~~~~~~~~~~~~~~-~~~i~l~~~--~~~~~~---~~~v~~al~~~---~~~~~Y-~~~g~~~lr~~ia~~~-g---- 143 (423)
|.+++..+...+...+ .+.|+|+.| .+..+. -+.|.+|-..+ .....| |..|.+++++.+++.+ |
T Consensus 9 p~DpIlgL~e~f~~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~~~llFG~d~~ 88 (396)
T COG1448 9 PADPILGLKEAFKADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQKLLFGADSP 88 (396)
T ss_pred CCCchhHHHHHHhcCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHHHHHHHHhcCCCcH
Confidence 5667777888776654 456899887 233333 34555554442 334667 7789999999999974 6
Q ss_pred -CCCCcE--EEeCCHHHHHHHHHHHh--cCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC--CCCCCCCHHHHHHHhhc
Q 014492 144 -LESDHI--LVGCGADELIDLIMRCV--LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER 216 (423)
Q Consensus 144 -~~~~~i--~~t~G~~~al~~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~ 216 (423)
++.++| +-|.|++.|+.+...-+ ..+..+|.+++|+|+.+.......|.++..+|. .++..+|++.+...+.+
T Consensus 89 ~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~ 168 (396)
T COG1448 89 ALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDGMLADLKT 168 (396)
T ss_pred HHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccccHHHHHHHHHh
Confidence 333443 46889999999888755 345677999999999999999999999999993 34567999999999875
Q ss_pred CCce-EEEEc-CCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc-----hhhhhccCCcEEEEccChhhh
Q 014492 217 EKPK-CIFLT-SPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES-----RMEWVKKHDNLIVLRTFSKRA 285 (423)
Q Consensus 217 ~~~~-~i~l~-~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~-----~~~~~~~~~~~i~i~S~SK~~ 285 (423)
...+ +|+|. -.|||||.-++.+++.+|++. +.+.+.|-+|.+|..+-. ....+......+++.||||.|
T Consensus 169 a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~~~lva~S~SKnf 248 (396)
T COG1448 169 APEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVGPELLVASSFSKNF 248 (396)
T ss_pred CCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhCCcEEEEehhhhhh
Confidence 4444 44444 458999999999999999985 999999999999985421 122233345589999999999
Q ss_pred cccCcccccccc---CHHHHHHHH----Hh-cCCC-CCcHHHHHHHHHHhCCh----HH---HHHHHHHHHHHHHHHHHH
Q 014492 286 GLAGLRVGYGAF---PLSIIEYLW----RA-KQPY-NVSVAAEVAACAALQNP----IY---LEKVKEALIKERERLFKL 349 (423)
Q Consensus 286 g~~G~R~G~i~~---~~~~~~~l~----~~-~~~~-~~~~~~~~a~~~~l~~~----~~---~~~~~~~~~~~~~~l~~~ 349 (423)
|+.|.|+|.+.. +.+..+++. .. +..| +++..+...+...|+++ +| +..++.++.++|..|.+.
T Consensus 249 gLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~ 328 (396)
T COG1448 249 GLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVDA 328 (396)
T ss_pred hhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999997654 444444433 22 2334 56777888888999985 34 567899999999999999
Q ss_pred HccC----CCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhhh
Q 014492 350 LKDV----PFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG--KPEHTDALMECLMHL 422 (423)
Q Consensus 350 L~~~----~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~l 422 (423)
|++. .+..+..+.|+|.+. |.+.+++.+...++||++...+ ||+++ +..+++.+.+++...
T Consensus 329 L~~~~~~~~f~~i~~Q~GMFsy~----Gls~~QV~rLree~~IY~v~sG--------Ri~vaGl~~~ni~~va~ai~~v 395 (396)
T COG1448 329 LKALGAPRNFDFIISQRGMFSYT----GLSPEQVDRLREEFGIYLVASG--------RINVAGLNTSNIDYVAKAIAAV 395 (396)
T ss_pred HHhhCCCcccchHhhcCceeecC----CCCHHHHHHHHHhccEEEecCC--------eeeeccCChhhHHHHHHHHHhh
Confidence 9883 344456788999887 5566776665559999999877 99997 466678888887653
No 153
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.96 E-value=1.7e-26 Score=225.44 Aligned_cols=308 Identities=12% Similarity=0.033 Sum_probs=226.2
Q ss_pred CCCCCHHHHHHHhcCCCCCCCCCc--chHHHHHHHHHHhCCCCC--cEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCch
Q 014492 106 PYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLESD--HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT 181 (423)
Q Consensus 106 ~~~~~~~v~~al~~~~~~~~Y~~~--g~~~lr~~ia~~~g~~~~--~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~ 181 (423)
|...++.+.+++...- .++-+.. -.+++|+.+++++|.+++ .|++|+|++++++.++..+..+||.+++..+.+.
T Consensus 11 p~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~ 89 (363)
T TIGR02326 11 PLTTSRTVKEAMLFDW-CTWDSDYNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAY 89 (363)
T ss_pred CCCCCHHHHHHhCCCC-CCCChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChh
Confidence 4445678888876522 1211111 256889999999999754 7999999999999999999888888777655554
Q ss_pred hh--HHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-CCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCc
Q 014492 182 MY--EFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYT 257 (423)
Q Consensus 182 ~~--~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~ 257 (423)
.. ...++..|++++.++.++++.+|++++++.+.+ .+++++.+++++||||+.+|.++|.++|+. |+++|+|++++
T Consensus 90 ~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~i~~I~~l~~~~g~~livD~~~~ 169 (363)
T TIGR02326 90 GARIVQIAEYLGIPHHVVDTGEVEPPDVVEVEAILAADPAITHIALVHCETTTGILNPIEAVAKLAHRHGKVTIVDAMSS 169 (363)
T ss_pred hHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCcHHHHHHHHHHcCCEEEEEcccc
Confidence 33 466788999999999877778999999999864 356788889999999999999999999987 99999999876
Q ss_pred cccCCCchhhhhccCCcEEEEccChhhh-cccCccccccccCHHHHHHHHHh--------------------cCCCCCcH
Q 014492 258 EFSGLESRMEWVKKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYLWRA--------------------KQPYNVSV 316 (423)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~i~i~S~SK~~-g~~G~R~G~i~~~~~~~~~l~~~--------------------~~~~~~~~ 316 (423)
... .+ . .+...+..+++.|++|.+ |.+| +||++++++.++++... ...|+.+.
T Consensus 170 ~g~-~~--~-~~~~~~~D~~~~s~~K~l~~p~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~ 243 (363)
T TIGR02326 170 FGG-IP--I-DIAELHIDYLISSANKCIQGVPG--FGFVIARQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPT 243 (363)
T ss_pred ccC-cc--c-chhhcCccEEEecCccccccCCc--ceEEEECHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcH
Confidence 322 11 1 122334558889999976 4445 79999999887764321 02356777
Q ss_pred HHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeecC---CCceEEEEEeCCC--CCHHHHHHHHHhCCc
Q 014492 317 AAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPYP---SYSNFILCEVTSG--MDAKKLKDDLAKMGV 388 (423)
Q Consensus 317 ~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p---~~~~~~~~~~~~~--~~~~~l~~~L~~~gI 388 (423)
..+.++.++++. ...+++..++++++++++.+.|+++++....+ ..+..+++.+++. .+..++.+.|.++||
T Consensus 244 ~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gi 323 (363)
T TIGR02326 244 HVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRALGFEPLLDDEIQSPIITSFYSPEDPDYRFADFYQRLKEQGF 323 (363)
T ss_pred HHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCeeccCcccCCceEEEEECCCCCCCCHHHHHHHHHHCCE
Confidence 777776666654 22367788999999999999998886433222 2334567888753 577889999999999
Q ss_pred EEEeCCCCCCCCeEEEEe-c--ChhhHHHHHHHHhh
Q 014492 389 MIRHYNNKELKGYVRVSV-G--KPEHTDALMECLMH 421 (423)
Q Consensus 389 ~v~~~~~~~~~~~iRis~-~--~~~~~~~l~~al~~ 421 (423)
.++++..+ ..+++||++ + +.++++++.++|++
T Consensus 324 ~v~~g~~~-~~~~iRi~~~~~~~~edv~~~l~~l~~ 358 (363)
T TIGR02326 324 VIYPGKVS-QVDCFRIGNIGEVDAADITRLLTAIGK 358 (363)
T ss_pred EEECCcCC-CCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence 99987643 357999996 4 55566666666654
No 154
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.96 E-value=2.5e-26 Score=225.45 Aligned_cols=319 Identities=15% Similarity=0.142 Sum_probs=225.5
Q ss_pred CCCCeeEcCCCCC--CCCCC---HHH----HHHHhcCCCCCCC-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492 93 KPEDIVKIDANEN--PYGPP---PEV----REALGQLKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (423)
Q Consensus 93 ~~~~~i~l~~~~~--~~~~~---~~v----~~al~~~~~~~~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~ 162 (423)
.+.+.+.|.+++. ++.++ ..+ .+++.. ....| ++.+..+||+++++++|. +++++|+|+++++.++
T Consensus 9 ~g~n~~~l~~~~v~iDlltds~t~ams~~~~~a~~~--gd~~Y~~~~g~~~Leeaia~~~g~--~~vv~t~~Gt~Al~la 84 (431)
T cd00617 9 AGYNVFLLRSEDVYIDLLTDSGTGAMSDYQWAAMML--GDEAYAGSKSFYDLEDAVQDLFGF--KHIIPTHQGRGAENIL 84 (431)
T ss_pred cCCCEEeCCCCCcCCCCCCCCCcHHHHHHHHHHHHh--CCCccCCCCCHHHHHHHHHHHHCC--CeEEEcCCHHHHHHHH
Confidence 4455677777766 55443 233 333332 11347 677899999999999996 5799999999999999
Q ss_pred HHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC----------CCCCCHHHHHHHhhcC---CceEEEEcCCCC
Q 014492 163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS----------DFSLNVELIADAVERE---KPKCIFLTSPNN 229 (423)
Q Consensus 163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~----------~~~~d~~~l~~~i~~~---~~~~i~l~~p~N 229 (423)
+.++++|||.| +++|.|..+.......|++++.++.+. .+.+|+++|++.+.+. ++++|++++|+|
T Consensus 85 ~~al~~pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N 163 (431)
T cd00617 85 FSILLKPGRTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNN 163 (431)
T ss_pred HHHhCCCCCEE-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcC
Confidence 99999999977 689999999988899999999999642 2349999999999732 388999999999
Q ss_pred Cc-CcCCCHHHHHHHHc---C-CCEEEEccCCccc--cC--------CCchhhhhccCCcEEEEccChhhhcccCcc---
Q 014492 230 PD-GSIINDEDLLKILE---M-PILVVLDEAYTEF--SG--------LESRMEWVKKHDNLIVLRTFSKRAGLAGLR--- 291 (423)
Q Consensus 230 Pt-G~~~~~~~l~~i~~---~-~~~li~Deay~~~--~~--------~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R--- 291 (423)
|+ |.+++.+++++|++ . |++||+|+++... .+ ....+. +..+.+.|++|.+.+.|+|
T Consensus 164 ~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~-----ei~~e~~s~sd~~~mS~~K~~~ 238 (431)
T cd00617 164 TAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIA-----EIAREMFSYADGCTMSAKKDGL 238 (431)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHH-----HHHHHhhccCCEEEEEeecCCC
Confidence 98 99999987765554 4 9999999996421 11 111111 2234567888888888887
Q ss_pred ---ccccccCH-HHHHHHHHhcCC-------CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecC
Q 014492 292 ---VGYGAFPL-SIIEYLWRAKQP-------YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYP 360 (423)
Q Consensus 292 ---~G~i~~~~-~~~~~l~~~~~~-------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p 360 (423)
.||+++++ +++++++..... .+.+.....++..+|+.....+...+++ ++++++.+.|++.++-.+.|
T Consensus 239 ~~~GG~i~~~d~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~~~~l~~~~-~~r~~l~~~L~~~G~~v~~P 317 (431)
T cd00617 239 VNIGGFLALRDDELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVEEDYLRHRV-EQVRYLGDRLDEAGVPIVEP 317 (431)
T ss_pred CccceEEEeCcHHHHHHHHHhccccCCccccccccHHHHHHHHHHHHhcccHHHHHHHH-HHHHHHHHHHHHCCCCccCC
Confidence 56999976 588887753311 1234444444444664321122233333 35688999999988666678
Q ss_pred CCceEEEEEeCC--------CCCHHHHHHHHH-hCCcEEEe-CC------CCC------CCCeEEEEec----ChhhHHH
Q 014492 361 SYSNFILCEVTS--------GMDAKKLKDDLA-KMGVMIRH-YN------NKE------LKGYVRVSVG----KPEHTDA 414 (423)
Q Consensus 361 ~~~~~~~~~~~~--------~~~~~~l~~~L~-~~gI~v~~-~~------~~~------~~~~iRis~~----~~~~~~~ 414 (423)
.+++|+|++.+. ..++.+++..|. +.||.+.. |. ... .-..+|+++. +.++++.
T Consensus 318 ~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~~t~~~~~~ 397 (431)
T cd00617 318 AGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRVYTQDHMDY 397 (431)
T ss_pred CcceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEeccccccCHHHHHH
Confidence 999999999762 235888887776 88998753 22 111 2368999975 5677888
Q ss_pred HHHHHhhh
Q 014492 415 LMECLMHL 422 (423)
Q Consensus 415 l~~al~~l 422 (423)
+.+++..+
T Consensus 398 ~~~~~~~~ 405 (431)
T cd00617 398 VAAAVIAL 405 (431)
T ss_pred HHHHHHHH
Confidence 88888765
No 155
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.96 E-value=4.6e-26 Score=225.46 Aligned_cols=317 Identities=16% Similarity=0.122 Sum_probs=225.8
Q ss_pred CCeeEcCCC-CCCCCCCHHHHHHHhcC-C-CCCC-------CC-CcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492 95 EDIVKIDAN-ENPYGPPPEVREALGQL-K-FPYI-------YP-DPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (423)
Q Consensus 95 ~~~i~l~~~-~~~~~~~~~v~~al~~~-~-~~~~-------Y~-~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~ 163 (423)
+++++|..| +-.+..+|++++++.+. . ++.. +. .+...+|++.+++++|. +..+++++|+ +++..++
T Consensus 45 ~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~-~~~~~~~SG~-~An~~ai 122 (406)
T PRK13393 45 REVTVWCSNDYLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGK-EAALLFTSGY-VSNWAAL 122 (406)
T ss_pred ccEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhCC-CcEEEeCCcH-HHHHHHH
Confidence 467888765 45567789999888762 1 2111 11 11357899999999995 3456666665 5888888
Q ss_pred HHhcC--CCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc---CCceEEEEcCCCCCcCcCCCHH
Q 014492 164 RCVLD--PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDE 238 (423)
Q Consensus 164 ~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~~ 238 (423)
..+.. +||.|+.....|......++..|++++.++. .|++.+++.+.. .++++|++++++|++|.+.+.+
T Consensus 123 ~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~~l~ 197 (406)
T PRK13393 123 STLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRH-----NDPADLERKLSDLDPHRPKLVAFESVYSMDGDIAPIA 197 (406)
T ss_pred HHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCC-----CCHHHHHHHHHhccCCCCEEEEEcCCCCCCCchhCHH
Confidence 87665 6787777777887777777888888877762 366777766642 3678999999999999999999
Q ss_pred HHHHHHcC-CCEEEEccCCccccCCCch---hhhhcc-CCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC--
Q 014492 239 DLLKILEM-PILVVLDEAYTEFSGLESR---MEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP-- 311 (423)
Q Consensus 239 ~l~~i~~~-~~~li~Deay~~~~~~~~~---~~~~~~-~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~-- 311 (423)
++.++|+. ++++|+||+|....+++.. ....+. .+.+++++||||.||++| ||+++++++++.+......
T Consensus 198 ~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~G---G~~~~~~~~~~~l~~~~~~~~ 274 (406)
T PRK13393 198 EICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVMG---GYITGSAALCDFIRSFASGFI 274 (406)
T ss_pred HHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhcccC---ceeeCCHHHHHHHHHhCcCce
Confidence 99999997 9999999999743322211 111111 223678899999999888 9999999999988876554
Q ss_pred --CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHh-CCc
Q 014492 312 --YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAK-MGV 388 (423)
Q Consensus 312 --~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~-~gI 388 (423)
.+.++..+.++.++|+..+.....+++++++++++.+.|+++++ .+.++.++++.+.+++..++.++.+.|.+ +||
T Consensus 275 ~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~i~~v~~~~~~~~~~l~~~L~~~~Gi 353 (406)
T PRK13393 275 FTTSLPPAVAAGALASVRHLKASSAERERHQDRVARLRARLDKAGI-PHLPNPSHIVPVMVGDPVLCKQISDELLDRYGI 353 (406)
T ss_pred ecCccCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHcCC-CcCCCCCCeEEEEeCCHHHHHHHHHHHHHhCCE
Confidence 24566777777777764221123346678889999999988753 44466777877766432346788888886 699
Q ss_pred EEEeCCCC---CCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492 389 MIRHYNNK---ELKGYVRVSVG---KPEHTDALMECLMHL 422 (423)
Q Consensus 389 ~v~~~~~~---~~~~~iRis~~---~~~~~~~l~~al~~l 422 (423)
.++++..+ .+.++|||++. +.++++++.++|+++
T Consensus 354 ~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~ 393 (406)
T PRK13393 354 YVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEI 393 (406)
T ss_pred EEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHH
Confidence 99876542 34578999986 677777777777653
No 156
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.96 E-value=1.7e-26 Score=226.73 Aligned_cols=314 Identities=19% Similarity=0.141 Sum_probs=219.7
Q ss_pred EcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCc----------chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhc
Q 014492 99 KIDANENPYGPPPEVREALGQL-KFPYIYPDP----------ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL 167 (423)
Q Consensus 99 ~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~----------g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~ 167 (423)
+|+.+... +.++.+.+++.+. .....+|.. ..+++|+.+++++|+++++|++|+|++++++.++..++
T Consensus 2 yld~aa~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~ 80 (379)
T TIGR03402 2 YLDNNATT-RVDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSAL 80 (379)
T ss_pred cCCCcCCC-CCCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHH
Confidence 44544332 3467888888752 111122210 14578899999999999999999999999999988764
Q ss_pred ---CCCCeEEEcCCCchhhHHH---HHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHH
Q 014492 168 ---DPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL 241 (423)
Q Consensus 168 ---~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~ 241 (423)
.+||.|++....|+.+... ++..|++++.+|.+.++.+|++++++.++ ++++++++++++||||.++|.+++.
T Consensus 81 ~~~~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~g~~~~~~l~~~i~-~~~~lv~i~~~~n~tG~~~~~~~I~ 159 (379)
T TIGR03402 81 AAQPEKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDEEGRLDLEELRAAIT-DDTALVSVMWANNETGTIFPIEEIG 159 (379)
T ss_pred HhcCCCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCCCCcCCHHHHHHhcC-CCcEEEEEEcccCCeeecccHHHHH
Confidence 4568899988888765433 33469999999987777899999999997 6899999999999999999999999
Q ss_pred HHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHH-HH-H-----HHhcCCCC
Q 014492 242 KILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII-EY-L-----WRAKQPYN 313 (423)
Q Consensus 242 ~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~-~~-l-----~~~~~~~~ 313 (423)
++|+. |+++++|++|..... .. .+...+-.+++.|.+|.+|.+| +|+++.+++.. .. + ......++
T Consensus 160 ~l~~~~g~~vivD~~~~~g~~---~~-~~~~~~~D~~~~s~~K~~gp~G--~g~l~v~~~~~~~p~~~g~~~~~~~~~gt 233 (379)
T TIGR03402 160 EIAKERGALFHTDAVQAVGKI---PI-DLKEMNIDMLSLSGHKLHGPKG--VGALYIRKGTRFRPLLRGGHQERGRRAGT 233 (379)
T ss_pred HHHHHcCCEEEEECccccccc---cc-CcccCCCCEEEEcHHHcCCCCc--eEEEEECCCCCCCCcccCCccCCCcCCCC
Confidence 99987 999999999974221 11 1222344578888899776556 67777655431 00 0 00112345
Q ss_pred CcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHcc-CCCCeecCC---C-ceEEEEEeCCCCCHHHHHHHHHhCC
Q 014492 314 VSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKD-VPFLNPYPS---Y-SNFILCEVTSGMDAKKLKDDLAKMG 387 (423)
Q Consensus 314 ~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~p~---~-~~~~~~~~~~~~~~~~l~~~L~~~g 387 (423)
.+.....++.++++. .+++++..++++++++++.+.|++ ++.+.+... . ...+.+.++ +.+..++...|.++|
T Consensus 234 ~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~g 312 (379)
T TIGR03402 234 ENVPGIVGLGKAAELATEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISFE-YIEGEAILLLLDMEG 312 (379)
T ss_pred ccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEec-CCCHHHHHHhhccCC
Confidence 666666666666654 356777888999999999999985 766654321 1 223333444 457889999998999
Q ss_pred cEEEeCCCC--C-----------------CCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 388 VMIRHYNNK--E-----------------LKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 388 I~v~~~~~~--~-----------------~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
|.++.+... . ..+.||+|++ +.+|++++.++|+.
T Consensus 313 I~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~ 368 (379)
T TIGR03402 313 ICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPP 368 (379)
T ss_pred EEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHH
Confidence 999976531 1 1478999986 45566666666654
No 157
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.95 E-value=4.8e-26 Score=225.04 Aligned_cols=318 Identities=16% Similarity=0.182 Sum_probs=221.3
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhcCCCCCCCC------CcchHH----HHHHHHHHhCCCCCcEEEeC-CHHHHHHHHH
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQLKFPYIYP------DPESRR----LRAALAKDSGLESDHILVGC-GADELIDLIM 163 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y~------~~g~~~----lr~~ia~~~g~~~~~i~~t~-G~~~al~~~~ 163 (423)
..++.++.+.+++++|+.+.++..+......|. ..|..+ +++.+++++|.+.+++++++ |++++...+.
T Consensus 20 ~~~~~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~~~~ 99 (398)
T cd00613 20 QSMSFLGSGTYKHNPPAVIKRNILENEFYTAYTPYQPEISQGRLQALFELQTMLCELTGMDVANASLQDEATAAAEAAGL 99 (398)
T ss_pred cCcccccccccCCcCcHHHHHHhccccCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCCccceeccCchHHHHHHHHH
Confidence 345899999999988888777666551112342 234444 55555566788766777766 4445555555
Q ss_pred HHhcCC--CCeEEEcCCCchhhHHHHHHCC----CeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCH
Q 014492 164 RCVLDP--GDKIVDCPPTFTMYEFDAAVNG----AAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND 237 (423)
Q Consensus 164 ~~l~~~--gd~Vl~~~p~y~~~~~~~~~~g----~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~ 237 (423)
.+++.+ ||+|+++.|.|+.+...++..| ++++.++.++++.+|++++++.+. +++++|++++|+ |||.+.+.
T Consensus 100 ~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~t~~viv~~~~-~~G~~~~~ 177 (398)
T cd00613 100 AAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTVDLEALKEEVS-EEVAALMVQYPN-TLGVFEDL 177 (398)
T ss_pred HHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCCCCCcCHHHHHHhcC-CCeEEEEEECCC-CCceecch
Confidence 556666 9999999999998888887777 999999976667899999999996 689999999985 89999886
Q ss_pred -HHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhccc----CccccccccCHHHHHHHHHh---
Q 014492 238 -EDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLA----GLRVGYGAFPLSIIEYLWRA--- 308 (423)
Q Consensus 238 -~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~----G~R~G~i~~~~~~~~~l~~~--- 308 (423)
+++.++|+. |+++|+|++|..+.. ... ....+.++++.|++|.+ ++ |+|+||++.++++++.+...
T Consensus 178 l~~i~~la~~~g~~livD~~~~~~~~-~~~---~~~~~~d~~~~s~~K~~-~p~g~Ggp~~g~l~~~~~~~~~~~~~~~~ 252 (398)
T cd00613 178 IKEIADIAHSAGALVYVDGDNLNLTG-LKP---PGEYGADIVVGNLQKTG-VPHGGGGPGAGFFAVKKELVRFLPGRLVG 252 (398)
T ss_pred HHHHHHHHHhcCCEEEEEeccccccC-CCC---hHHcCCCEEEeeccccC-CCCCCCCCceeEEEEhhhhHhhCCCCeec
Confidence 999999987 999999998764331 111 11234569999999987 55 78999999998887764110
Q ss_pred --------------------------cC--CCCCcHHH-HHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHccCCCCee
Q 014492 309 --------------------------KQ--PYNVSVAA-EVAACAALQ-NPIYLEKVKEALIKERERLFKLLKDVPFLNP 358 (423)
Q Consensus 309 --------------------------~~--~~~~~~~~-~~a~~~~l~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 358 (423)
.. .++.+... +.+...+.. ..+.+++.+++++++++++.+.|+++++..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~- 331 (398)
T cd00613 253 VTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRLKEVGGVL- 331 (398)
T ss_pred cccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-
Confidence 00 01222222 233222222 245678889999999999999999887554
Q ss_pred cCCCceE--EEEEeCC--CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014492 359 YPSYSNF--ILCEVTS--GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH 421 (423)
Q Consensus 359 ~p~~~~~--~~~~~~~--~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~ 421 (423)
.+.+..+ ++++++. +.++.++++.|.++||.+.... ....+.+|+++....+.+++++.++.
T Consensus 332 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~L~~~gi~~~~~~-~~~~~~lRis~~~~~t~edid~~~~~ 397 (398)
T cd00613 332 PFNGPFFHEFVLRLPPLYGIRAEDLAKALIDGGFHAPTMY-LPVDGTLMIEPTETETKEELDALLEA 397 (398)
T ss_pred cCCCCeeEEEEEEcCCcchHHHHHHHHhhhhcCccccccc-cCCCCeEEEEcCCCCCHHHHHHHHHh
Confidence 2333333 5777764 3467889999999999875422 23457999998754444566666554
No 158
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.95 E-value=8.8e-26 Score=216.05 Aligned_cols=317 Identities=21% Similarity=0.188 Sum_probs=244.7
Q ss_pred CCCeeEcCCCC-CCCCCCHHHHHHHhcC--CCC-----CC--CCCc-chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492 94 PEDIVKIDANE-NPYGPPPEVREALGQL--KFP-----YI--YPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (423)
Q Consensus 94 ~~~~i~l~~~~-~~~~~~~~v~~al~~~--~~~-----~~--Y~~~-g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~ 162 (423)
+.++++|.+|+ -.+..+|+++++..+. .++ .+ +++. -..+|++.+|+|+|. ++.+++++|-. ++..+
T Consensus 38 ~~~~~nf~SNdYLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g~-e~al~f~SGy~-AN~~~ 115 (388)
T COG0156 38 GRKVLNFCSNDYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLGA-EAALLFSSGFV-ANLGL 115 (388)
T ss_pred CceeEeeeccCcccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhCC-CcEEEEcccch-hHHHH
Confidence 46689998763 4567788888777652 111 11 2222 256899999999995 46788888887 55566
Q ss_pred HHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcC-----CceEEEEcCCCCCcCcCCCH
Q 014492 163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIIND 237 (423)
Q Consensus 163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~~ 237 (423)
+.+|++++|.|+...-.|.+....++..+++++.+. ..|++.|++.+.+. +.++|+......+.|.+.|+
T Consensus 116 i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f~-----HnD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiApL 190 (388)
T COG0156 116 LSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRFK-----HNDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAPL 190 (388)
T ss_pred HHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEec-----CCCHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCCH
Confidence 677999999999999999999999999999999987 36889999998642 25677777999999999999
Q ss_pred HHHHHHHcC-CCEEEEccCCccccCCCchhhhh-----ccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC
Q 014492 238 EDLLKILEM-PILVVLDEAYTEFSGLESRMEWV-----KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP 311 (423)
Q Consensus 238 ~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~-----~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~ 311 (423)
+++.+|++. +.++++||+|+-...++.....+ ...+.+|+++||||+||..| ||+.++..+++.+....++
T Consensus 191 ~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G---g~v~g~~~~~d~L~~~ar~ 267 (388)
T COG0156 191 PELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSG---GYIAGSAALIDYLRNRARP 267 (388)
T ss_pred HHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcccC---ceeeCcHHHHHHHHHhCCc
Confidence 999999998 99999999999877654332222 22455899999999999888 9999999999999988776
Q ss_pred C----CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCC
Q 014492 312 Y----NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMG 387 (423)
Q Consensus 312 ~----~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~g 387 (423)
| ++++....++..+++..+.....+++++++..++.+.++..++ ...++.+.++.+.+.+...+.++.+.|+++|
T Consensus 268 ~ifStalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~~~~~~-~~~~s~s~I~pv~~gd~~~a~~~s~~l~~~G 346 (388)
T COG0156 268 FIFSTALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLKALGL-VLLPSESPIIPVILGDEERALEASRALLEEG 346 (388)
T ss_pred eeccCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCC-ccCCCCCCeeeeEeCCHHHHHHHHHHHHHCC
Confidence 4 4677777777778776555567788888888888877766653 3357788888888865556788889999889
Q ss_pred cEEEeCCC---CCCCCeEEEEecC---hhhHHHHHHHHhh
Q 014492 388 VMIRHYNN---KELKGYVRVSVGK---PEHTDALMECLMH 421 (423)
Q Consensus 388 I~v~~~~~---~~~~~~iRis~~~---~~~~~~l~~al~~ 421 (423)
|.+.+..+ +.+...+|++++. .++++.+.+++..
T Consensus 347 i~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~ 386 (388)
T COG0156 347 IYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSE 386 (388)
T ss_pred eeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHh
Confidence 99987665 5566899999874 5555555555554
No 159
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.95 E-value=9.4e-26 Score=226.06 Aligned_cols=315 Identities=18% Similarity=0.206 Sum_probs=225.9
Q ss_pred CeeEcCCCCCCCCCCHHHHHHHhcCCCCCCC-C-----Ccc----hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHH
Q 014492 96 DIVKIDANENPYGPPPEVREALGQLKFPYIY-P-----DPE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRC 165 (423)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y-~-----~~g----~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~ 165 (423)
....++.+..++..+..+.+++........| | ..| ..++++.+++++|++.+++.+|+|+++++..++.+
T Consensus 69 ~~~~lg~g~~~~~~p~~~~~~~~~~~~~~~y~~~~~~~~~g~~~~~~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a 148 (447)
T PRK00451 69 YPSFLGAGAYDHYIPAVVDHIISRSEFYTAYTPYQPEISQGTLQAIFEYQTMICELTGMDVANASMYDGATALAEAALMA 148 (447)
T ss_pred CcccCcccccCCcCcHHHHHHHhchhHHHhcCCCCCccchHHHHHHHHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHH
Confidence 5678888888887777766665432211224 3 223 23455777888999888999999999999988887
Q ss_pred hc-CCCCeEEEcCCCchhhHHHHHH----CCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHH
Q 014492 166 VL-DPGDKIVDCPPTFTMYEFDAAV----NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL 240 (423)
Q Consensus 166 l~-~~gd~Vl~~~p~y~~~~~~~~~----~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l 240 (423)
+. .+||+|+++.+.|+.+...++. .|++++.+|.+++ .+|++++++.+. +++++|++++| ||||.+.+.+++
T Consensus 149 ~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~-~~d~~~l~~~i~-~~t~~v~l~~p-n~tG~v~~l~~I 225 (447)
T PRK00451 149 VRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDG-VTDLEALEAAVD-DDTAAVVVQYP-NFFGVIEDLEEI 225 (447)
T ss_pred HHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCCC-CCCHHHHHHhcC-CCeEEEEEECC-CCCCeeCCHHHH
Confidence 74 7899999999999888876554 6999999998777 899999999997 68999999999 899999999999
Q ss_pred HHHHcC-CCEEEE--ccCCccccCCCchhhhhccCCcEEEEc---cChhhhcccCccccccccCHHHHHHHH--------
Q 014492 241 LKILEM-PILVVL--DEAYTEFSGLESRMEWVKKHDNLIVLR---TFSKRAGLAGLRVGYGAFPLSIIEYLW-------- 306 (423)
Q Consensus 241 ~~i~~~-~~~li~--Deay~~~~~~~~~~~~~~~~~~~i~i~---S~SK~~g~~G~R~G~i~~~~~~~~~l~-------- 306 (423)
.++|+. |+++++ |.+...+.. .....+.++++. ++||.+++.|+|+||+++++++++.+.
T Consensus 226 ~~~a~~~~~~~iv~~d~~~~g~~~------~~~~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~~ 299 (447)
T PRK00451 226 AEIAHAGGALFIVGVDPVSLGLLK------PPGEYGADIVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQMPGRLVGETV 299 (447)
T ss_pred HHHHHHCCCEEEEEcChHHhccCC------CcccCCCCEEEECCCcCCCCCCCCCCCchHHHhhHHHHhhCCCCEeeeec
Confidence 999998 888887 543221111 012334446655 677777888999999999998887731
Q ss_pred --------------------HhcCCCCCc--HHHH-HHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCC
Q 014492 307 --------------------RAKQPYNVS--VAAE-VAACAALQ--NPIYLEKVKEALIKERERLFKLLKDVPFLNPYPS 361 (423)
Q Consensus 307 --------------------~~~~~~~~~--~~~~-~a~~~~l~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~ 361 (423)
+.....+.. ...+ .++..++. ..+++++.++++.++++++.+.|++++++.+. +
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~ 378 (447)
T PRK00451 300 DADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVELF-D 378 (447)
T ss_pred ccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEec-C
Confidence 111112221 1122 23322222 34678899999999999999999998776665 4
Q ss_pred CceEEE--EEeCCCCCHHHHHHHHHhCCcEEE-eCCC--CCCCCeEEEEe---cChhhHHHHHHHHhhh
Q 014492 362 YSNFIL--CEVTSGMDAKKLKDDLAKMGVMIR-HYNN--KELKGYVRVSV---GKPEHTDALMECLMHL 422 (423)
Q Consensus 362 ~~~~~~--~~~~~~~~~~~l~~~L~~~gI~v~-~~~~--~~~~~~iRis~---~~~~~~~~l~~al~~l 422 (423)
+++|.+ ++++ .+..++.++|.++||.+. ++.. +...+++|+++ .+.+++++|.++|+.+
T Consensus 379 ~~~~~~~~v~~~--~~~~~~~~~L~~~gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~ 445 (447)
T PRK00451 379 GPFFNEFVVRLP--KPAEEVNEALLEKGILGGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALGEV 445 (447)
T ss_pred CCeEEEEEEecC--CCHHHHHHHHHhcCCCCCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 445543 5553 467899999998887642 2221 23457999996 5677888888888764
No 160
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.95 E-value=1e-25 Score=221.47 Aligned_cols=279 Identities=18% Similarity=0.216 Sum_probs=204.1
Q ss_pred CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhH----HHHHHCCCeEEEecC
Q 014492 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPR 199 (423)
Q Consensus 124 ~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~ 199 (423)
.+||+++..+|++++++++|. +++++++|+++++..++.+++++||+|+++.|.|..+. ..++..|++++.++.
T Consensus 59 ~r~~~p~~~~Le~~iA~~~g~--~~~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~ 136 (400)
T PRK06234 59 SRLGNPTSTEVENKLALLEGG--EAAVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDT 136 (400)
T ss_pred cCCCCccHHHHHHHHHHHhCC--CcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECC
Confidence 456889999999999999995 35778888888999999889999999999999886433 345678999999974
Q ss_pred CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC---CCEEEEccCCccccCCCchhhhhccCCcEE
Q 014492 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLI 276 (423)
Q Consensus 200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i 276 (423)
.|++++++.+. +++++|++++|+||||.+.+.+++.++++. |+++|+|++|..+.... .. ..+..+
T Consensus 137 -----~d~e~l~~~i~-~~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~~~-~l----~~g~Di 205 (400)
T PRK06234 137 -----SNLEEVRNALK-ANTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYIQR-PL----QLGADV 205 (400)
T ss_pred -----CCHHHHHHHhc-cCCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhcCC-ch----hhCCcE
Confidence 27999999997 689999999999999999999999999986 89999999998665421 11 224569
Q ss_pred EEccChhhhcccCccc-cccccCHHHHHHHHHhc----CCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHc
Q 014492 277 VLRTFSKRAGLAGLRV-GYGAFPLSIIEYLWRAK----QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLK 351 (423)
Q Consensus 277 ~i~S~SK~~g~~G~R~-G~i~~~~~~~~~l~~~~----~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~ 351 (423)
++.|+||.++.+|.|+ ||++++++++++++... ....+++.....+...|+. +..+.++..++..++.+.|+
T Consensus 206 vv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~~~~~~g~~l~p~~a~l~~~~l~t---l~~r~~~~~~na~~~a~~L~ 282 (400)
T PRK06234 206 VVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFGIKDMTGSVIGPFEAFLIIRGMKT---LQIRMEKHCKNAMKVAKFLE 282 (400)
T ss_pred EEeeccccccCCCCceeEEEEecHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCc---HHHHHHHHHHHHHHHHHHHH
Confidence 9999999999889875 99999999888876432 1245666666655555544 44555666678888888888
Q ss_pred cCCCCe-e-cC----------------CCceEEEEEeCCC-CCHHHHHHHHHhCCcEEEeCCC-----------------
Q 014492 352 DVPFLN-P-YP----------------SYSNFILCEVTSG-MDAKKLKDDLAKMGVMIRHYNN----------------- 395 (423)
Q Consensus 352 ~~~~~~-~-~p----------------~~~~~~~~~~~~~-~~~~~l~~~L~~~gI~v~~~~~----------------- 395 (423)
+.+.+. + +| +.|..+.++++++ .....|++.|.-.++.+.-|+.
T Consensus 283 ~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~ 362 (400)
T PRK06234 283 SHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGVEEGKVVMNNVKLATLAVSLGDAETLIQHPASMTHSPYTA 362 (400)
T ss_pred cCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhCCcceEeccCCCCCceecCCccCCCCCCCH
Confidence 765432 1 22 2345667888632 2245666666544444432211
Q ss_pred ------CCCCCeEEEEecChhhHHHHHHHH
Q 014492 396 ------KELKGYVRVSVGKPEHTDALMECL 419 (423)
Q Consensus 396 ------~~~~~~iRis~~~~~~~~~l~~al 419 (423)
.-.++.||||++.++ .++|.+-+
T Consensus 363 ~~~~~~gi~~~l~R~svGlE~-~~dl~~dl 391 (400)
T PRK06234 363 EERKEAGISDGLVRLSVGLED-VDDIIADL 391 (400)
T ss_pred HHHHhcCCCCCeEEEEeCCCC-HHHHHHHH
Confidence 012468999999765 35554433
No 161
>PRK06460 hypothetical protein; Provisional
Probab=99.95 E-value=6e-26 Score=221.31 Aligned_cols=218 Identities=16% Similarity=0.176 Sum_probs=169.0
Q ss_pred CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCc----hhhHHHHHHCCCeEEEecCC
Q 014492 125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF----TMYEFDAAVNGAAVVKVPRK 200 (423)
Q Consensus 125 ~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y----~~~~~~~~~~g~~~~~v~~~ 200 (423)
++.++...+|++++++++|.+. .+++++| ++++..++.+++++||+|+++.|.| ..|...++..|+++..++.+
T Consensus 41 r~~~p~~~~L~~~lA~l~g~~~-~v~~~sG-~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~~ 118 (376)
T PRK06460 41 REANPTVLELTKKIVELENAEM-GVAFSSG-MGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNPG 118 (376)
T ss_pred CCCCccHHHHHHHHHHHhCCCc-EEEeCCH-HHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEECCC
Confidence 3466788999999999999754 5666555 5899999999999999999987654 45667778899999988753
Q ss_pred CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEc
Q 014492 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR 279 (423)
Q Consensus 201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~ 279 (423)
+ .+.+++.+. +++|+|++++|+||||.+++.+++.++|+. |+++|+|++|..+... .. + ..+.++++.
T Consensus 119 ~-----~~~l~~~~~-~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~~~~-~~---l-~~~~divv~ 187 (376)
T PRK06460 119 S-----DNIIEKAKS-KRYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTPINQ-KP---L-ELGADIVVH 187 (376)
T ss_pred C-----HHHHHHhcC-CCceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCccccC-Ch---h-hcCCCEEEe
Confidence 2 234444443 689999999999999999999999999987 9999999999854321 11 1 234569999
Q ss_pred cChhhhccc-CccccccccCHHHHHHHHHhcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCC
Q 014492 280 TFSKRAGLA-GLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFL 356 (423)
Q Consensus 280 S~SK~~g~~-G~R~G~i~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 356 (423)
|+||.++.. +.|.||+++++++++++.+.+..++.+.. ...+..+++..++++.+.+++.++++++.+.|++.+.+
T Consensus 188 S~sK~l~G~~~~~~G~~~~~~~l~~~l~~~~~~~g~~~~-~~~a~~~l~~~~~l~~r~~~~~~n~~~l~~~L~~~p~v 264 (376)
T PRK06460 188 SASKFLAGHNDVIAGLAAGYGKLLNVIDQMRRTLGTSLD-PHAAYLTLRGIKTLKIRMDVINRNAEQIAEFLEGHPKV 264 (376)
T ss_pred ecceeccCCCCceEEEEecCHHHHHHHHHHHHhcCCCCC-HHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 999987522 36799999999999999877766654322 23445566667889999999999999999999987654
No 162
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.95 E-value=2e-25 Score=218.50 Aligned_cols=306 Identities=18% Similarity=0.178 Sum_probs=225.1
Q ss_pred CCCCHHHHHHHhcC-C----CCCCCCCcc--hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcC----CCCeEEE
Q 014492 107 YGPPPEVREALGQL-K----FPYIYPDPE--SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLD----PGDKIVD 175 (423)
Q Consensus 107 ~~~~~~v~~al~~~-~----~~~~Y~~~g--~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~----~gd~Vl~ 175 (423)
.++.|.+.+++.+. . ....|+... ..++++.+++++|.+++++++++|+++++..++..+.. +|++|++
T Consensus 30 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~ 109 (371)
T PRK13520 30 TEPHPIARKAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHLPDAYGYITSGGTEANIQAVRAARNLAKAEKPNIVV 109 (371)
T ss_pred cCchHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCeEEecCcHHHHHHHHHHHHhhccCCCceEEe
Confidence 34567777777552 1 111233322 25799999999998877889999999999988876654 5789999
Q ss_pred cCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEcc
Q 014492 176 CPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDE 254 (423)
Q Consensus 176 ~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~De 254 (423)
..+.|..+...++..|++++.+|.+.++.+|++++++.+. +++++|++++++|+||.+.|.+++.++|+. |+++++|+
T Consensus 110 ~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~ 188 (371)
T PRK13520 110 PESAHFSFDKAADMLGVELRRAPLDDDYRVDVKAVEDLID-DNTIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDA 188 (371)
T ss_pred cCcchHHHHHHHHHcCceEEEecCCCCCcCCHHHHHHHHh-hCCEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEe
Confidence 9999999998888899999999987777899999999997 568788888899999999999999999987 99999999
Q ss_pred CCccccCC--Cchh-hhhccCCcEEEEccChhhhcccCcccccccc-CHHHHHHHHHhcCCC-----------CCcHHHH
Q 014492 255 AYTEFSGL--ESRM-EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQPY-----------NVSVAAE 319 (423)
Q Consensus 255 ay~~~~~~--~~~~-~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~-~~~~~~~l~~~~~~~-----------~~~~~~~ 319 (423)
+|..+... .... .......-..+..|.+| |+++|.++|+++. ++++++.+... .++ +.+....
T Consensus 189 a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K-~~~a~~~~G~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~gt~~~~~~ 266 (371)
T PRK13520 189 AFGGFVIPFLDDPPNFDFSLPGVDSITIDPHK-MGLAPIPAGGILFRDESYLDALAVD-TPYLTSKKQATLTGTRSGAGV 266 (371)
T ss_pred cchhHHHHhhcCCCCccccCCCCceEEECCcc-ccCccCCceEEEEcCHHHHHhhccc-CccccCCCCcceEeeccChHH
Confidence 99865421 1110 00111222345557778 6778889997775 66677665321 111 1233445
Q ss_pred HHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCe-ecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC
Q 014492 320 VAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK 396 (423)
Q Consensus 320 ~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~ 396 (423)
.++..+++. .+.+++.+++..++++++.+.|++++ +. +.+...+++.++++ +..++.+.|.++||.++.+.
T Consensus 267 ~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~v~~~~~---~~~~v~~~L~~~gi~v~~~~-- 340 (371)
T PRK13520 267 AATYAVMKYLGREGYRKVVERCMENTRWLAEELKERG-FEPVIEPVLNIVAFDDP---NPDEVREKLRERGWRVSVTR-- 340 (371)
T ss_pred HHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhCC-CEEecCCCceEEEEecC---CHHHHHHHHHHCCceeccCC--
Confidence 555566653 34467888899999999999999885 44 44556778888875 57899999999999998754
Q ss_pred CCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492 397 ELKGYVRVSVG---KPEHTDALMECLMHL 422 (423)
Q Consensus 397 ~~~~~iRis~~---~~~~~~~l~~al~~l 422 (423)
..+++||++. +.++++++.++|+.+
T Consensus 341 -~~~~iRis~~~~~t~edi~~~~~~l~~~ 368 (371)
T PRK13520 341 -CPEALRIVCMPHVTREHIENFLEDLKEV 368 (371)
T ss_pred -CCCEEEEEEECCCCHHHHHHHHHHHHHH
Confidence 2468999984 667777777777653
No 163
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.95 E-value=2e-25 Score=221.82 Aligned_cols=318 Identities=16% Similarity=0.137 Sum_probs=222.1
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhcCC---CCCCCC------C-cchHH----HHHHHHHHhCCCCCcEEEeCCHHHHHH
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQLK---FPYIYP------D-PESRR----LRAALAKDSGLESDHILVGCGADELID 160 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~~---~~~~Y~------~-~g~~~----lr~~ia~~~g~~~~~i~~t~G~~~al~ 160 (423)
++.++|..++++ .+|.+++++.... ++.+++ . ..... .|+.+++++|.+..+|++++| ++++.
T Consensus 25 ~~~~~l~~~~n~--~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~i~~~sg-t~al~ 101 (416)
T PRK00011 25 EEHIELIASENF--VSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAEYANVQPHSG-SQANA 101 (416)
T ss_pred hcCeeeecccCc--CCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCceeeecCCc-hHHHH
Confidence 556999999998 5789999986531 111111 1 11222 345789999998777777776 56888
Q ss_pred HHHHHhcCCCCeEEEcCCCchhhHH-----HHHHCCCeEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcC
Q 014492 161 LIMRCVLDPGDKIVDCPPTFTMYEF-----DAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI 234 (423)
Q Consensus 161 ~~~~~l~~~gd~Vl~~~p~y~~~~~-----~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~ 234 (423)
.++.+++++||+|+++.|+|..+.. .....|++++.++.+ +++.+|++++++.+++.++++|++++++| |..
T Consensus 102 ~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~k~v~~~~~~~--~~~ 179 (416)
T PRK00011 102 AVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDEVEKLALEHKPKLIIAGASAY--SRP 179 (416)
T ss_pred HHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCcCcccCCcCHHHHHHHHHhcCCCEEEECCCcC--CCc
Confidence 9999999999999999999975422 112346788888865 45789999999999755899999876655 567
Q ss_pred CCHHHHHHHHcC-CCEEEEccCCccc-cCCCchhhhhccCCcEEEEccChhhhcccCccccccccC-HHHHHHHHHhcCC
Q 014492 235 INDEDLLKILEM-PILVVLDEAYTEF-SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP 311 (423)
Q Consensus 235 ~~~~~l~~i~~~-~~~li~Deay~~~-~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~-~~~~~~l~~~~~~ 311 (423)
.+.+++.++|+. |+++|+|++|... ...+.....+. ...+++.|+||.+ +|.|.||++++ +++++++.+...+
T Consensus 180 ~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~--~~di~~~S~~K~l--~g~~gg~i~~~~~~~~~~l~~~~~~ 255 (416)
T PRK00011 180 IDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP--HADVVTTTTHKTL--RGPRGGLILTNDEELAKKINSAVFP 255 (416)
T ss_pred cCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC--CCcEEEecCCcCC--CCCCceEEEeCCHHHHHHHHHHhCc
Confidence 899999999987 9999999998632 21111111111 2348899999965 78899999996 6888888776654
Q ss_pred CCC---cHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeecC--CCceEEEEEeCC-CCCHHHHHHHH
Q 014492 312 YNV---SVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPYP--SYSNFILCEVTS-GMDAKKLKDDL 383 (423)
Q Consensus 312 ~~~---~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p--~~~~~~~~~~~~-~~~~~~l~~~L 383 (423)
+.. ....+.++..++.. .+++++.+++++++++++.+.|++++ +.+.+ ..++++|+.+++ +.+..++.+.|
T Consensus 256 ~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~L 334 (416)
T PRK00011 256 GIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAERG-FRVVSGGTDNHLVLVDLRSKGLTGKEAEAAL 334 (416)
T ss_pred cccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCC-CeeeecCCCCeEEEEeCcccCCCHHHHHHHH
Confidence 322 22223322222221 24567888999999999999999876 44433 345889999853 44778899999
Q ss_pred HhCCcEEEeCCC------CCCCCeEEEEec-------ChhhHHHHHHHHhhh
Q 014492 384 AKMGVMIRHYNN------KELKGYVRVSVG-------KPEHTDALMECLMHL 422 (423)
Q Consensus 384 ~~~gI~v~~~~~------~~~~~~iRis~~-------~~~~~~~l~~al~~l 422 (423)
.++||.++.+.. +..+.++|++.. +.++++++.++|+++
T Consensus 335 ~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~ 386 (416)
T PRK00011 335 EEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADV 386 (416)
T ss_pred HHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHH
Confidence 999999974321 223567999642 356788888888763
No 164
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.95 E-value=1.7e-25 Score=220.29 Aligned_cols=317 Identities=16% Similarity=0.227 Sum_probs=213.6
Q ss_pred CCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCC----CCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492 92 RKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (423)
Q Consensus 92 ~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~----~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~ 163 (423)
.+++.++|+..+. +.++ .+|++.+++.+ +.. ...|..+...++.+.+++..+ .+++++++|+++++..++
T Consensus 28 ~dG~~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v~~~~sGseA~~~al 105 (389)
T PRK01278 28 EDGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWHVSNLYRIPEQERLAERLVENSF--ADKVFFTNSGAEAVECAI 105 (389)
T ss_pred CCCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhcCccccccCChHHHHHHHHHHhhCC--CCEEEEcCCcHHHHHHHH
Confidence 4567899997752 2333 46888888876 221 112333445678888888764 468999999999999998
Q ss_pred HHh----cCCCC----eEEEcCCCchhhHHHHHHCCCeEEEe----cCCCCCC----CCHHHHHHHhhcCCceEEEEcCC
Q 014492 164 RCV----LDPGD----KIVDCPPTFTMYEFDAAVNGAAVVKV----PRKSDFS----LNVELIADAVEREKPKCIFLTSP 227 (423)
Q Consensus 164 ~~l----~~~gd----~Vl~~~p~y~~~~~~~~~~g~~~~~v----~~~~~~~----~d~~~l~~~i~~~~~~~i~l~~p 227 (423)
+.. ..+|| +|++.++.|+.+...+...+...... |..+++. .|++++++.+. .++++|+++.+
T Consensus 106 ~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~avivep~ 184 (389)
T PRK01278 106 KTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAIT-PNTAAILIEPI 184 (389)
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhC-CCeEEEEEecc
Confidence 866 44565 89999999998776665544432222 1112222 58999999997 58999999988
Q ss_pred CCCcC-cCCCHHHHHHHHcC----CCEEEEccCCccccCCCchhh--hhccCCcEEEEccChhhhcccCccccccccCHH
Q 014492 228 NNPDG-SIINDEDLLKILEM----PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS 300 (423)
Q Consensus 228 ~NPtG-~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~ 300 (423)
+||+| .+++.+.+++|++. |+++|+||+|.++...+.... ..+..+. +.|+||.++ +|+|+||++++++
T Consensus 185 ~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pd---i~t~sK~l~-~G~~ig~~~~~~~ 260 (389)
T PRK01278 185 QGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPD---IMAVAKGIG-GGFPLGACLATEE 260 (389)
T ss_pred cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCCCCC---EEEEehhcc-CCcceEEEEEcHH
Confidence 99999 67788887777664 999999999998754332111 1111122 357899998 8999999999999
Q ss_pred HHHHHHHhcC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHc----cCC-CCeecCCCceEEEEEeCCC
Q 014492 301 IIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLK----DVP-FLNPYPSYSNFILCEVTSG 373 (423)
Q Consensus 301 ~~~~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~----~~~-~~~~~p~~~~~~~~~~~~~ 373 (423)
+++.+..... .++.+++++.++.++|+..+ -+...++++++.+++.+.|+ +.+ .+....+.|.+++++++
T Consensus 261 ~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~-~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~v~g~G~~~~i~~~-- 337 (389)
T PRK01278 261 AAKGMTPGTHGSTYGGNPLAMAVGNAVLDVIL-APGFLDNVQRMGLYLKQKLEGLVDRFPDVIEEVRGKGLLLGLKCV-- 337 (389)
T ss_pred HHhccCCCCCCCCCCccHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHhhCCCceeeEecccEEEEEEEe--
Confidence 8887755433 35788999999887775310 01122223333333333332 233 22223456788888885
Q ss_pred CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 374 MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 374 ~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.++.++++.|.++||.+.+++ .+++||+++...+.+++.+++++|
T Consensus 338 ~~~~~~~~~l~~~GV~~~p~~----~~~lR~~p~~~~~~~~i~~~l~~l 382 (389)
T PRK01278 338 VPNRDLVQALRDEGLLTVGAG----DNVVRLLPPLIITEEEIDEALERL 382 (389)
T ss_pred cCHHHHHHHHHHCCeEEeecC----CCEEEEeCCcccCHHHHHHHHHHH
Confidence 367899999998999999875 579999975422345666666654
No 165
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.95 E-value=3.6e-25 Score=218.77 Aligned_cols=314 Identities=16% Similarity=0.133 Sum_probs=220.3
Q ss_pred eEcCCCCCCCCCCHHHHHHHhcC-C--C--CCCCC-------CcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHH
Q 014492 98 VKIDANENPYGPPPEVREALGQL-K--F--PYIYP-------DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC 165 (423)
Q Consensus 98 i~l~~~~~~~~~~~~v~~al~~~-~--~--~~~Y~-------~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~ 165 (423)
++|+.+... +.++.+++++.+. . . .+... ....+++|+.+++++|+++++|++++|++++++.++..
T Consensus 5 ~yld~aa~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~ 83 (402)
T TIGR02006 5 IYLDYAATT-PVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSREIVFTSGATESNNLAIKG 83 (402)
T ss_pred EEeeCCcCC-CCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHH
Confidence 778776554 4578888887652 1 1 11100 11245789999999999999999999999999998876
Q ss_pred hc----CCCCeEEEcCCCchhhHHHH---HHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHH
Q 014492 166 VL----DPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE 238 (423)
Q Consensus 166 l~----~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~ 238 (423)
+. ++||+|++..++|+.+...+ +..|++++.++.++++.+|++++++.+. ++++++++++++||||.+.|.+
T Consensus 84 l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~-~~~~lv~v~~~~n~tG~~~~~~ 162 (402)
T TIGR02006 84 IAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKSNGLIDLEELKAAIR-DDTILVSIMHVNNEIGVIQDIA 162 (402)
T ss_pred HHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcC-CCCEEEEEECCCcCceecccHH
Confidence 53 68999999999998655443 4469999999987777899999999996 6799999999999999999999
Q ss_pred HHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHh---------
Q 014492 239 DLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA--------- 308 (423)
Q Consensus 239 ~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~--------- 308 (423)
+|.++++. |+++++|++++.... + . .+...+-.+++.|.+|.+|.+| +|+++.+++....+...
T Consensus 163 ~I~~l~~~~g~~livD~a~a~g~~-~--~-~~~~~~~D~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~~~~~g~~~~~~ 236 (402)
T TIGR02006 163 AIGEICRERKVFFHVDAAQSVGKI-P--I-NVNELKVDLMSISGHKIYGPKG--IGALYVRRKPRVRLEALIHGGGHERG 236 (402)
T ss_pred HHHHHHHHcCCEEEEEcchhcCCc-c--c-CccccCCCEEEEehhhhcCCCc--eEEEEEccCCCCCCCceecCCCccCC
Confidence 99999987 999999999974322 1 1 1123344588888999877546 78887765433322211
Q ss_pred cCCCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCC---Cc-eEEEEEeCCCCCHHHHHHHH
Q 014492 309 KQPYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYPS---YS-NFILCEVTSGMDAKKLKDDL 383 (423)
Q Consensus 309 ~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~---~~-~~~~~~~~~~~~~~~l~~~L 383 (423)
...++.+.....++..+++. .++++...++++++++++.+.|++++.+.+... .. ..+.+.++ +.+.+++...|
T Consensus 237 ~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~~~~v~f~-~~~~~~~~~~l 315 (402)
T TIGR02006 237 MRSGTLPTHQIVGMGEAFRIAKEEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPGNLNVSFN-YVEGESLIMAL 315 (402)
T ss_pred ccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEEe-CcCHHHHHHhc
Confidence 11235566666666566643 245677888999999999999988876654321 11 11123443 34566666555
Q ss_pred HhCCcEEEeCCCC-------------------CCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492 384 AKMGVMIRHYNNK-------------------ELKGYVRVSVG---KPEHTDALMECLMHL 422 (423)
Q Consensus 384 ~~~gI~v~~~~~~-------------------~~~~~iRis~~---~~~~~~~l~~al~~l 422 (423)
++|.++.|... ...++||+|++ +.+|.+++.++|+.+
T Consensus 316 --~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~~ 374 (402)
T TIGR02006 316 --KDLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKSA 374 (402)
T ss_pred --CCEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHH
Confidence 58887755331 01479999986 566777777777653
No 166
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.94 E-value=8.9e-25 Score=212.39 Aligned_cols=296 Identities=16% Similarity=0.147 Sum_probs=210.0
Q ss_pred CCHHHHHHHhcCCCCCCCCCc-chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCC---------------e
Q 014492 109 PPPEVREALGQLKFPYIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD---------------K 172 (423)
Q Consensus 109 ~~~~v~~al~~~~~~~~Y~~~-g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd---------------~ 172 (423)
+++++++++.+.... .++.. -..++++.+++++|. +++++++|+++++.+++.+++++|| +
T Consensus 25 ~~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~a~~~g~--~~~~~~~g~t~al~~al~al~~~Gd~~~~~~~~~s~~~~~e 101 (363)
T TIGR01437 25 VSDEVADAQKRGAQN-YFEIKELVNKTGEYIANLLGV--EDAVIVSSASAGIAQSVAAVITRGNRYLVENLHDSKIEVNE 101 (363)
T ss_pred CCHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHhhCC--CeEEEEcCHHHHHHHHHHHHhcCCCcchhhcccccccccce
Confidence 678999999874321 12222 356788888888886 4789999999999999999999998 8
Q ss_pred EEEcCCCchhh----HHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEE-EcCCCCCcCcCCCHHHHHHHHcC-
Q 014492 173 IVDCPPTFTMY----EFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIF-LTSPNNPDGSIINDEDLLKILEM- 246 (423)
Q Consensus 173 Vl~~~p~y~~~----~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~-l~~p~NPtG~~~~~~~l~~i~~~- 246 (423)
|+++.|.|..| ...+...|++++.++. ++.+|++++++++. +++++++ +++|+||+|.+.+.+++.++|+.
T Consensus 102 Vi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~--~~~~d~~~le~ai~-~~t~ai~~v~~~~~~~g~~~~~~~i~~~a~~~ 178 (363)
T TIGR01437 102 VVLPKGHNVDYGAPVETMVRLGGGKVVEAGY--ANECSAEQLEAAIT-EKTAAILYIKSHHCVQKSMLSVEDAAQVAQEH 178 (363)
T ss_pred EEEECccchhcCCchHHHHHhcCCeEEEEcC--CCCCCHHHHHHhcC-hhceEEEEEecCCCCcCCcCCHHHHHHHHHHc
Confidence 99999877655 4666778999999986 35799999999997 6888766 57899999999999999999997
Q ss_pred CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC----C---CCcHHHH
Q 014492 247 PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP----Y---NVSVAAE 319 (423)
Q Consensus 247 ~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~----~---~~~~~~~ 319 (423)
|+++|+|++|..-. ......+..+++.|++|.+ .|++.|+++.++++++.+...... + ..+..+.
T Consensus 179 gi~vivD~a~~~~~------~~~~~~g~D~~~~S~~K~l--~gp~~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~gl 250 (363)
T TIGR01437 179 NLPLIVDAAAEEDL------QKYYRLGADLVIYSGAKAI--EGPTSGLVLGKKKYIEWVKLQSKGIGRAMKVGKENILGL 250 (363)
T ss_pred CCeEEEECCCCCch------HHHHHcCCCEEEEeCCccc--CCCceEEEEEcHHHHHHHHhccCCCcceeccCHHHHHHH
Confidence 99999999997211 1111223458889999965 688899999998888876443221 1 1222233
Q ss_pred HHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeec---CCCce-----EEEEEeC-CCCCHHHHHHHHHhCC--c
Q 014492 320 VAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPY---PSYSN-----FILCEVT-SGMDAKKLKDDLAKMG--V 388 (423)
Q Consensus 320 ~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~---p~~~~-----~~~~~~~-~~~~~~~l~~~L~~~g--I 388 (423)
.++...+.. +..+..+.+.++++++.+.|++++++.+. +..+. -+.++.. .+.+..++.+.|.++| |
T Consensus 251 ~aAl~~~~~--~~~~~~~~~~~~~~~l~~~L~~i~g~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~l~~~L~~~~~~I 328 (363)
T TIGR01437 251 TAALEQYLS--TGKESGAEMVAKLTPFIEALNTLKGVSASIVQDEAGRDIARAEIRFDESELGMTAADVVQALRQGEPAI 328 (363)
T ss_pred HHHHHHHHc--cCcccHHHHHHHHHHHHHHHhcCCCeEEEEecCCCCCcCceEEEEEeccCCCCCHHHHHHHHhcCCCCE
Confidence 333333322 12233334445677899999998777653 21111 1223331 2678999999998777 6
Q ss_pred EEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhhh
Q 014492 389 MIRHYNNKELKGYVRVSVG--KPEHTDALMECLMHL 422 (423)
Q Consensus 389 ~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~l 422 (423)
.+++. +...+.+|+++. +++|.+.+.++|+++
T Consensus 329 ~~r~~--~~~~~~~~l~~~~~~~~e~~~~~~~l~~~ 362 (363)
T TIGR01437 329 YTRGY--KANEGIIEIDPRSVTGGQLDIIVERIREI 362 (363)
T ss_pred EEeee--eecCCeEEEEeecCCHHHHHHHHHHHHHh
Confidence 66653 344678888865 467788888888765
No 167
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.94 E-value=3.9e-25 Score=216.63 Aligned_cols=280 Identities=16% Similarity=0.169 Sum_probs=202.7
Q ss_pred CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHH----HHHCCCeEEEecC
Q 014492 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPR 199 (423)
Q Consensus 124 ~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~ 199 (423)
.+|+++...+|++.+++++|. ++.+++++| +.++..++.+++++||+|+++.|.|...... ++..|+++..++.
T Consensus 56 ~r~~~pt~~~Le~~lA~l~G~-~~al~~~sG-~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~ 133 (386)
T PRK06767 56 SRLGNPTVKLFEERMAVLEGG-EEALAFGSG-MAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDM 133 (386)
T ss_pred cCCCCcchHHHHHHHHHHhCC-CcEEEECCH-HHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCC
Confidence 457888889999999999995 356656555 5688888888999999999999988754333 3345666665542
Q ss_pred CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEE
Q 014492 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (423)
Q Consensus 200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i 278 (423)
.|++++++++. +++++|++++|+||||.+.+.+++.++++. |+++|+|++|....... .. ..+..+++
T Consensus 134 -----~d~~~l~~~i~-~~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~-pl----~~g~Div~ 202 (386)
T PRK06767 134 -----ETEADIENKIR-PNTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYLQR-PL----ELGCDAVV 202 (386)
T ss_pred -----CCHHHHHHhhC-cCceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCcccccCC-ch----hcCCcEEE
Confidence 47899999997 689999999999999999999999999987 99999999997443221 11 12335888
Q ss_pred ccChhhhcccCccc-cccccCHHHHHHHHHh-cCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC
Q 014492 279 RTFSKRAGLAGLRV-GYGAFPLSIIEYLWRA-KQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP 354 (423)
Q Consensus 279 ~S~SK~~g~~G~R~-G~i~~~~~~~~~l~~~-~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 354 (423)
.|+||.++.+|.|+ ||++++++.++++.+. ... ..++++.+.++...|+ .+..+.++.+++..++.+.|++++
T Consensus 203 ~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~~~g~~~~~~~a~l~~~~L~---tl~~r~~~~~~~a~~la~~L~~~p 279 (386)
T PRK06767 203 HSATKYIGGHGDVVAGVTICKTRALAEKIRPMRKDIGGIMAPFDAWLLLRGLK---TLAVRMDRHCDNAEKIVSFLKNHD 279 (386)
T ss_pred ecCcceecCCCCceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCC---cHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999998888885 8999998887765432 221 2346665555544443 345666777899999999999987
Q ss_pred CCe-e-cC----------CCceEEEEEeCCC-CCHHHHHHHHHhCCcEEEeCCC------C-----------------CC
Q 014492 355 FLN-P-YP----------SYSNFILCEVTSG-MDAKKLKDDLAKMGVMIRHYNN------K-----------------EL 398 (423)
Q Consensus 355 ~~~-~-~p----------~~~~~~~~~~~~~-~~~~~l~~~L~~~gI~v~~~~~------~-----------------~~ 398 (423)
.+. + +| ..|..+.++++++ .+...|.+.|...++.++-|+. + -.
T Consensus 280 ~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~ 359 (386)
T PRK06767 280 AVEGVWYPEGELASRQMKRGGGVISFSIKGGKEETQAFINDLHFITIAVSLGDTETLIQHPATMTHAAIPAELRQEMGIY 359 (386)
T ss_pred CccEEECCCcHHHHHhCCCCCceEEEEEcCCHHHHHHHHHhCCccEEecCCCCcCccccCCCccccccCCHHHHHhcCCC
Confidence 765 2 33 3456777888632 3567788888777766654322 0 12
Q ss_pred CCeEEEEecChhhHHHHHHHHh
Q 014492 399 KGYVRVSVGKPEHTDALMECLM 420 (423)
Q Consensus 399 ~~~iRis~~~~~~~~~l~~al~ 420 (423)
++.||||++.++ .++|.+-|+
T Consensus 360 ~~l~R~svGlE~-~~dl~~dl~ 380 (386)
T PRK06767 360 DNLIRLSVGLES-WEDIVSDLE 380 (386)
T ss_pred CCeEEEEeccCC-HHHHHHHHH
Confidence 468999999765 455554443
No 168
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.94 E-value=7.4e-25 Score=213.31 Aligned_cols=230 Identities=17% Similarity=0.180 Sum_probs=177.2
Q ss_pred CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchh----hHHHHHHCCCeEEEecC
Q 014492 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPR 199 (423)
Q Consensus 124 ~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~ 199 (423)
.+|+++...+|+++++++.|.+. .++++|+++++..++. ++++||+|+++.|.|+. +...++..|++++.++.
T Consensus 47 ~r~~~pt~~~le~~la~l~g~~~--~~~~~sG~~ai~~~~~-ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 123 (366)
T PRK08247 47 SRTGNPTRGVLEQAIADLEGGDQ--GFACSSGMAAIQLVMS-LFRSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNT 123 (366)
T ss_pred cCCCCchHHHHHHHHHHHhCCCc--EEEEcCHHHHHHHHHH-HhCCCCEEEEecCCcCcHHHHHHHHhhccCceEEEECC
Confidence 56788889999999999999754 3667777889988764 78999999999999975 34455668999999874
Q ss_pred CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEE
Q 014492 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (423)
Q Consensus 200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i 278 (423)
.|+++++++++ +++++|++++|+||+|...+.+++.++++. |+++|+|++|....... +. ..+.++++
T Consensus 124 -----~d~~~l~~~i~-~~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~~~~~~-p~----~~g~di~i 192 (366)
T PRK08247 124 -----ASLKAIEQAIT-PNTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVLQR-PL----EEGADIVI 192 (366)
T ss_pred -----CCHHHHHHhcc-cCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccC-ch----hcCCcEEE
Confidence 38899999997 589999999999999999999999999987 99999999995332211 11 23456999
Q ss_pred ccChhhhccc-CccccccccC-HHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC
Q 014492 279 RTFSKRAGLA-GLRVGYGAFP-LSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP 354 (423)
Q Consensus 279 ~S~SK~~g~~-G~R~G~i~~~-~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 354 (423)
.|+||.++.. +++.|+++++ +++.+++...+.. ..++++.+..+...++ .+....++.+++++.+.+.|++.+
T Consensus 193 ~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~l~---tl~~r~~~~~~~a~~l~~~L~~~p 269 (366)
T PRK08247 193 HSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNAAGAVLSPFDSWLLIRGMK---TLALRMRQHEENAKAIAAFLNEQP 269 (366)
T ss_pred eecceeccCCCceeeeEEecChHHHHHHHHHHHHhcCCCCChHHHHHHHhccC---cHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999988632 4688999986 6777777655433 4567777777776665 344555667999999999999987
Q ss_pred CCee--cCC-CceEEEEEeC
Q 014492 355 FLNP--YPS-YSNFILCEVT 371 (423)
Q Consensus 355 ~~~~--~p~-~~~~~~~~~~ 371 (423)
.+.. +|+ +++|.| ++.
T Consensus 270 ~v~~v~~P~~gg~~sf-~~~ 288 (366)
T PRK08247 270 GVTDVLYPGRGGMLSF-RLQ 288 (366)
T ss_pred CeeEEecCCcCcEEEE-EEC
Confidence 6652 664 555554 774
No 169
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.94 E-value=9.6e-25 Score=213.02 Aligned_cols=300 Identities=17% Similarity=0.179 Sum_probs=209.3
Q ss_pred eEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcC
Q 014492 98 VKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCP 177 (423)
Q Consensus 98 i~l~~~~~~~~~~~~v~~al~~~~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~ 177 (423)
|+++++.+..+..+. ....+ .+|+++...+|+++++++.| .+++++++|+++++..++.+++++||+|+++.
T Consensus 26 i~~ss~~~~~~~~~~-----~~~~Y-~R~~~p~~~~le~~lA~l~g--~~~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~ 97 (382)
T TIGR02080 26 IYLSTTYNFTGFNEP-----RAYDY-SRSGNPTRDLLQQALAELEG--GAGAVVTNTGMSAIHLVTTALLGPDDLLVAPH 97 (382)
T ss_pred eeCCceeEeCCcCcc-----CCCcc-cCCCCchHHHHHHHHHHHhC--CCcEEEEcCHHHHHHHHHHHHcCCCCEEEEcC
Confidence 677777655432211 11223 57888889999999999998 46899999999999999999999999999999
Q ss_pred CCchhhHHH----HHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEE
Q 014492 178 PTFTMYEFD----AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVL 252 (423)
Q Consensus 178 p~y~~~~~~----~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~ 252 (423)
|+|...... ....|+++..++ ..|+++++++++ +++|+|++++|+||||.+++.+++.++++. |+++|+
T Consensus 98 p~y~~~~~~~~~~~~~~~~~v~~~d-----~~d~~~l~~ai~-~~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvv 171 (382)
T TIGR02080 98 DCYGGTYRLLNALAKKGCFRVLFVD-----QGDEQALRAALA-QKPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVV 171 (382)
T ss_pred CCcHHHHHHHHHHHhhcCeEEEEEC-----CCCHHHHHHhcC-cCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEE
Confidence 999853332 222355666554 247999999997 689999999999999999999999999987 999999
Q ss_pred ccCCccccCCCchhhhhccCCcEEEEccChhhhc-ccCcccccccc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCC
Q 014492 253 DEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG-LAGLRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQN 328 (423)
Q Consensus 253 Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g-~~G~R~G~i~~-~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~ 328 (423)
|++|..+.... ... .+..++++|+||.++ .+|++.|++++ ++++++++...+.. ..++++.+..+...+
T Consensus 172 D~a~~~~~~~~-pl~----~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~~~g~~~sp~~a~l~lr~l-- 244 (382)
T TIGR02080 172 DNTFLSPALQN-PLA----LGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWANNLGVTGGAFDSYLTLRGL-- 244 (382)
T ss_pred ECCCcccccCC-chh----hCCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHHHccCCCCCHHHHHHHHccc--
Confidence 99998654322 111 122488999999875 46789999876 67788877765544 356666655544333
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHccCCCCe-e-cC----------------CCceEEEEEeCCCCC-HHHHHHHHHhCCcE
Q 014492 329 PIYLEKVKEALIKERERLFKLLKDVPFLN-P-YP----------------SYSNFILCEVTSGMD-AKKLKDDLAKMGVM 389 (423)
Q Consensus 329 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~p----------------~~~~~~~~~~~~~~~-~~~l~~~L~~~gI~ 389 (423)
+.+..+.++..++...+.+.|++.+.+. + +| +.|..+.+++.++.. ...|++.|.--++.
T Consensus 245 -~tl~~R~~~~~~na~~~a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~~~~~~ 323 (382)
T TIGR02080 245 -RTLVARMRLQQRNAQAIVEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKGGEQTVRRFLGGLSLFTLA 323 (382)
T ss_pred -chHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecCcHHHHHHHHHcCCcceEe
Confidence 4566667777899999999998876543 2 23 235567788853221 23455554321222
Q ss_pred EEeCCC----------------------C-CCCCeEEEEecChhhHHHHHHHHh
Q 014492 390 IRHYNN----------------------K-ELKGYVRVSVGKPEHTDALMECLM 420 (423)
Q Consensus 390 v~~~~~----------------------~-~~~~~iRis~~~~~~~~~l~~al~ 420 (423)
+.-|+. . -.++.||||++.++ .++|.+-|+
T Consensus 324 ~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGlE~-~~dl~~dl~ 376 (382)
T TIGR02080 324 ESLGGVESLIAHPATMTHAAMGPEARAEAGISDTLLRLSVGLED-ADDLIADLE 376 (382)
T ss_pred ccCCCCcceeECCCccCcccCCHHHHHhcCCCcCeEEEEeccCC-HHHHHHHHH
Confidence 221110 0 11468999999865 466655554
No 170
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.94 E-value=1.5e-24 Score=213.91 Aligned_cols=312 Identities=16% Similarity=0.189 Sum_probs=215.8
Q ss_pred CCCCCeeEcCCCCC--CCC-CCHHHHHHHhc-CCC---CC-CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492 92 RKPEDIVKIDANEN--PYG-PPPEVREALGQ-LKF---PY-IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (423)
Q Consensus 92 ~~~~~~i~l~~~~~--~~~-~~~~v~~al~~-~~~---~~-~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~ 163 (423)
.++++++|+..+.. .+| .+|.+.+++.+ +.. .. .+..+...+|.+.++++.+. +.+++++++++|++.++
T Consensus 37 ~~G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~~~~SGseA~e~Al 114 (396)
T PRK04073 37 PEGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLTSRAFHSDQLGPWYEKVAKLTGK--DMVLPMNTGAEAVETAI 114 (396)
T ss_pred CCCCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhcCCC--CeEEEcCChHHHHHHHH
Confidence 45778999976632 343 46888888876 221 11 12333456788889888763 68999999999999998
Q ss_pred HHhcC---------CC-CeEEEcCCCchhhH-HHHHHCCCe------------EEEecCCCCCCCCHHHHHHHhhcCCce
Q 014492 164 RCVLD---------PG-DKIVDCPPTFTMYE-FDAAVNGAA------------VVKVPRKSDFSLNVELIADAVEREKPK 220 (423)
Q Consensus 164 ~~l~~---------~g-d~Vl~~~p~y~~~~-~~~~~~g~~------------~~~v~~~~~~~~d~~~l~~~i~~~~~~ 220 (423)
+.... +| ++|+...-+|+... ......+.. +..+| ..|++++++.+. .+++
T Consensus 115 k~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~i~-~~~~ 188 (396)
T PRK04073 115 KAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIP-----YGDLEALKAAIT-PNTA 188 (396)
T ss_pred HHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeC-----CCCHHHHHHhcc-cCeE
Confidence 86531 34 67888877776433 222222211 12222 127899999886 6789
Q ss_pred EEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCchh--hhhccCCcEEEEccChhhhcccCcccc
Q 014492 221 CIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAGLRVG 293 (423)
Q Consensus 221 ~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~i~S~SK~~g~~G~R~G 293 (423)
+|++++++||||.+++ .+++.++|+. |+++|+||+|.+|...+... ...+..++ +.++||.+|.+|+|+|
T Consensus 189 ~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~pd---i~~~sK~lg~gg~~ig 265 (396)
T PRK04073 189 AFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNVTPD---MYILGKALGGGVFPIS 265 (396)
T ss_pred EEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHHhhhcCCCCC---EEEecccccCCCCcce
Confidence 9999999999999987 4567777765 99999999999876543222 11122222 3357999998889999
Q ss_pred ccccCHHHHHHHHHh--cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC--CCeecCCCceEEEEE
Q 014492 294 YGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP--FLNPYPSYSNFILCE 369 (423)
Q Consensus 294 ~i~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~~~~p~~~~~~~~~ 369 (423)
|+++++++++.+... ...|+.+++++.++.++|+..+ -+...++.+++++++.+.|++++ .+...++.|+|++++
T Consensus 266 ~~~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~-~~~l~~~~~~~~~~l~~~L~~l~~~~i~~~~~~g~~~~~~ 344 (396)
T PRK04073 266 CVAANRDILGVFTPGSHGSTFGGNPLACAVSIAALEVLE-EEKLPERSLELGEYFKEQLKEIDNPMIKEVRGRGLFIGVE 344 (396)
T ss_pred EEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHhhcCCcccceecceEEEEEE
Confidence 999999999887643 2346789999999998886321 12344666777888888887763 233345668899998
Q ss_pred eCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEe---cChhhHHHHHHHHhh
Q 014492 370 VTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSV---GKPEHTDALMECLMH 421 (423)
Q Consensus 370 ~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~---~~~~~~~~l~~al~~ 421 (423)
++ .++.++.+.|.++||.+.+.. +++|||++ .+.++++++.++|++
T Consensus 345 ~~--~~~~~~~~~l~~~Gv~~~~~~----~~~iRi~p~l~~t~e~i~~~~~~l~~ 393 (396)
T PRK04073 345 LN--EPARPYCEALKEEGLLCKETH----ETVIRFAPPLVITKEELDWAFEKIKA 393 (396)
T ss_pred ec--chHHHHHHHHHHCCeEEecCC----CCEEEEECCcccCHHHHHHHHHHHHH
Confidence 85 357789999999999998643 47999995 355555666555544
No 171
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.94 E-value=1.2e-24 Score=210.93 Aligned_cols=277 Identities=16% Similarity=0.080 Sum_probs=204.0
Q ss_pred CC-CcchHHHHHHHHH----HhCCC--CCcEEEeCCHHHHHHHHHHHhcC------------CC--CeEEEcCCCchhhH
Q 014492 126 YP-DPESRRLRAALAK----DSGLE--SDHILVGCGADELIDLIMRCVLD------------PG--DKIVDCPPTFTMYE 184 (423)
Q Consensus 126 Y~-~~g~~~lr~~ia~----~~g~~--~~~i~~t~G~~~al~~~~~~l~~------------~g--d~Vl~~~p~y~~~~ 184 (423)
|+ .++..++++++++ ++|++ ++++++|+|+++++..++.+++. ++ +.|+++.++|..+.
T Consensus 30 y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~ 109 (345)
T cd06450 30 WDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVE 109 (345)
T ss_pred cccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHH
Confidence 63 4456666666654 45874 45899999999999999987742 23 47888999999998
Q ss_pred HHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCcc
Q 014492 185 FDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTE 258 (423)
Q Consensus 185 ~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~ 258 (423)
..++..|++++.+|.++++.+|++++++.+.+ .+++++++++|+||||.+.+.+++.++|+. |+++++|++|..
T Consensus 110 ~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~a~~~ 189 (345)
T cd06450 110 KAAAYLDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDAAYGG 189 (345)
T ss_pred HHHHHHhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEechhhH
Confidence 88888899999999877778999999999963 168889999999999999999999999987 999999999987
Q ss_pred ccCCCchhhh-hcc-CCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCcHHHHHHHHHHhCChHHHHHHH
Q 014492 259 FSGLESRMEW-VKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVK 336 (423)
Q Consensus 259 ~~~~~~~~~~-~~~-~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 336 (423)
+......... ... .+-..+..|++|.++ ++.++|+++.+ .+.+.++...+.. +.+++.+
T Consensus 190 ~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~-~p~g~g~~~~~-----------------~~~~~~~l~~l~~-~g~~~~~ 250 (345)
T cd06450 190 FLLPFPEPRHLDFGIERVDSISVDPHKYGL-VPLGCSAVLVR-----------------ALKLWATLRRFGR-DGYGEHI 250 (345)
T ss_pred HHhhChhhHHHhcCccccCEEEEchhHhhC-CCcchHHHHHH-----------------HHHHHHHHHHHhH-HHHHHHH
Confidence 6532111110 111 123456779999654 77889988766 3444455555543 4567888
Q ss_pred HHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCC----CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC---
Q 014492 337 EALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS----GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK--- 408 (423)
Q Consensus 337 ~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~----~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~--- 408 (423)
++..++++++.+.|++++.+.+ .+..++++.+.+++ +.+..++.+.|.++|+.+.++.....++++|++++.
T Consensus 251 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~iv~f~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~lRis~~~~~~ 330 (345)
T cd06450 251 DRIVDLAKYLAELIRADPGFELLGEPNLSLVCFRLKPSVKLDELNYDLSDRLNERGGWHVPATTLGGPNVLRFVVTNPLT 330 (345)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEECCcchhhHHHHHHHHHHHhcCCEEEEeeEECCeEEEEEEecCCCC
Confidence 8889999999999999876654 34567777778764 256678999999887666544333356799999864
Q ss_pred -hhhHHHHHHHHhh
Q 014492 409 -PEHTDALMECLMH 421 (423)
Q Consensus 409 -~~~~~~l~~al~~ 421 (423)
.++++++.++|++
T Consensus 331 t~~di~~l~~~l~~ 344 (345)
T cd06450 331 TRDDADALLEDIER 344 (345)
T ss_pred CHHHHHHHHHHHHh
Confidence 3555666665553
No 172
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.94 E-value=2.4e-24 Score=210.36 Aligned_cols=245 Identities=16% Similarity=0.191 Sum_probs=186.5
Q ss_pred CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchh-hHHHH---HHCCCeEEEecC
Q 014492 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM-YEFDA---AVNGAAVVKVPR 199 (423)
Q Consensus 124 ~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~-~~~~~---~~~g~~~~~v~~ 199 (423)
.+||++....|++++|+++|. +.+++++|+++++..++.+++++||+|+++.|+|+. +.... ...|.++..++
T Consensus 47 ~R~~~pt~~~L~~~lA~l~g~--~~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd- 123 (386)
T PRK08045 47 SRRGNPTRDVVQRALAELEGG--AGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVD- 123 (386)
T ss_pred eCCCCccHHHHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeC-
Confidence 568999999999999999994 469999999999999999999999999999999984 33222 22445666654
Q ss_pred CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEE
Q 014492 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (423)
Q Consensus 200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i 278 (423)
..|++++++.+. +++++|++++|+||||.+++.+++.++++. |+++|+|++|..+... .+.. ....+++
T Consensus 124 ----~~d~e~l~~~l~-~~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~~~~-~pl~----~gaDivv 193 (386)
T PRK08045 124 ----QGDEQALRAALA-EKPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPALQ-NPLA----LGADLVL 193 (386)
T ss_pred ----CCCHHHHHHhcc-cCCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccC-Cchh----hCCCEEE
Confidence 358999999997 689999999999999999999999999987 9999999999865432 2221 1224899
Q ss_pred ccChhhhc-ccCcccccccc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC
Q 014492 279 RTFSKRAG-LAGLRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP 354 (423)
Q Consensus 279 ~S~SK~~g-~~G~R~G~i~~-~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 354 (423)
.|++|.++ ..+.+.|+++. ++++++++...... ..++++.+..+...|+. +..+.++..+++..+.+.|++.+
T Consensus 194 ~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~~~g~~~~p~~~~l~~rgl~t---l~~R~~~~~~na~~la~~L~~~p 270 (386)
T PRK08045 194 HSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLRT---LVPRMELAQRNAQAIVKYLQTQP 270 (386)
T ss_pred eecceeccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhcc---HHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999875 45577898877 57787777655443 35778888877777764 77788888999999999999876
Q ss_pred CCe-e-cC----------------CCceEEEEEeCCCCC-HHHHHHHHH
Q 014492 355 FLN-P-YP----------------SYSNFILCEVTSGMD-AKKLKDDLA 384 (423)
Q Consensus 355 ~~~-~-~p----------------~~~~~~~~~~~~~~~-~~~l~~~L~ 384 (423)
.+. + +| +.|..+.+.+.++.+ ...|++.|.
T Consensus 271 ~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~ 319 (386)
T PRK08045 271 LVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLS 319 (386)
T ss_pred CEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhcc
Confidence 543 2 22 224567777753211 245555554
No 173
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.94 E-value=4.1e-24 Score=209.34 Aligned_cols=320 Identities=16% Similarity=0.154 Sum_probs=224.0
Q ss_pred CCCCCeeEcCCC--CCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHhCCCCC-cEEEeCCHHHHHHHHHHHhc
Q 014492 92 RKPEDIVKIDAN--ENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESD-HILVGCGADELIDLIMRCVL 167 (423)
Q Consensus 92 ~~~~~~i~l~~~--~~~~~~~~~v~~al~~-~~~~~~Y~~~g~~~lr~~ia~~~g~~~~-~i~~t~G~~~al~~~~~~l~ 167 (423)
..++.++|+..+ ...++.+|++.+++.+ +.....++.....++++.+++.+.-.++ .+++++++++++..+++...
T Consensus 26 ~dg~~~lD~~s~~~~~~lG~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~~SGseA~~~Al~~ar 105 (375)
T PRK04260 26 TDGKKYLDFSSGIGVTNLGFHPQVQQALQKQAGLIWHSPNLYLNSLQEEVAQKLIGDKDYLAFFCNSGAEANEAAIKIAR 105 (375)
T ss_pred CCCCEEEECCCCcccccCCCCHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHhcCcCCEEEEcCccHHHHHHHHHHHH
Confidence 456778999776 4557788999999876 3222234444456788888887643444 46889999999998888542
Q ss_pred --CCCCeEEEcCCCchhhH-HHHHHCCCeEEE------ecC-CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCC-
Q 014492 168 --DPGDKIVDCPPTFTMYE-FDAAVNGAAVVK------VPR-KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN- 236 (423)
Q Consensus 168 --~~gd~Vl~~~p~y~~~~-~~~~~~g~~~~~------v~~-~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~- 236 (423)
.++++|++.+..|+... ......|.+... ++. ......|++.+++.+. .++.+|++++++|++|.+.+
T Consensus 106 ~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~l~~~l~-~~~a~vi~e~v~~~~G~~~~~ 184 (375)
T PRK04260 106 KATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAIFNDLNSVKALVN-KNTAAVMLELVQGESGVLPAD 184 (375)
T ss_pred HhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeCCCCHHHHHHhcC-CCeEEEEECCeECCCCCcCCC
Confidence 34578888888887432 232222222110 000 0001248999999886 57889999999999999876
Q ss_pred ---HHHHHHHHcC-CCEEEEccCCccccCCCchhh--hhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHh--
Q 014492 237 ---DEDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA-- 308 (423)
Q Consensus 237 ---~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~-- 308 (423)
.+++.++|+. |+++|+||+|.++...+.... .....+. +.||||.++ +|+|+||+++++++.+.+...
T Consensus 185 ~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~~pd---i~t~sK~l~-~G~~ig~~~~~~~~~~~~~~~~~ 260 (375)
T PRK04260 185 KDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGIEPD---IFTLAKGLA-NGVPVGAMLAKSSLGGAFGYGSH 260 (375)
T ss_pred HHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCCCCC---EEEeccccc-CCcceEEEEEcHHHHhhcCCCCC
Confidence 4677777775 999999999987754432222 2222233 338999998 899999999999988877542
Q ss_pred cCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHh
Q 014492 309 KQPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAK 385 (423)
Q Consensus 309 ~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~ 385 (423)
...++.+++.+.++.++|+. +++.++.++..+..++.+.+.+.+.+.+...+..|+++|++++ .+..++.+.|.+
T Consensus 261 ~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~l~~ 338 (375)
T PRK04260 261 GSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKETVTTVRGLGYMIGIETT--ADLSQLVEAARD 338 (375)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEeccceEEEEEec--CcHHHHHHHHHh
Confidence 23467789999999888854 4567777777888888888887776544444568999999984 467889999999
Q ss_pred CCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 386 MGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 386 ~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
+||.+.+.. .+.+||++....+.+++.++++++
T Consensus 339 ~Gi~v~~~~----~~~lR~~~~~~~t~~~i~~~l~~l 371 (375)
T PRK04260 339 KGLIVLTAG----TNVIRLLPPLTLTKEEIEQGIAIL 371 (375)
T ss_pred CCCEEecCC----CCEEEEcCCCccCHHHHHHHHHHH
Confidence 999998753 478999995433346666666654
No 174
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.93 E-value=2.2e-24 Score=203.01 Aligned_cols=316 Identities=19% Similarity=0.158 Sum_probs=231.5
Q ss_pred eeEcCCCCCCCCCCHHHHHHHhcCC-CC-------CCCCCc---chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHH
Q 014492 97 IVKIDANENPYGPPPEVREALGQLK-FP-------YIYPDP---ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC 165 (423)
Q Consensus 97 ~i~l~~~~~~~~~~~~v~~al~~~~-~~-------~~Y~~~---g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~ 165 (423)
.|+||.+.. .+..|+++++|.... .. |.|+.. ..++.|+.+|+.+|+++++|++|+|++|+.++++..
T Consensus 2 miYlD~~AT-Tp~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNlaI~g 80 (386)
T COG1104 2 MIYLDNAAT-TPVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGADPEEIIFTSGATESNNLAIKG 80 (386)
T ss_pred ccccccccc-CCCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHHHHHh
Confidence 367776544 345688888887631 11 223211 245889999999999999999999999999999987
Q ss_pred h--cC----CCCeEEEcCCCchhhHHHHHHC---CCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCC
Q 014492 166 V--LD----PGDKIVDCPPTFTMYEFDAAVN---GAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236 (423)
Q Consensus 166 l--~~----~gd~Vl~~~p~y~~~~~~~~~~---g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~ 236 (423)
. .. .|.+|+++.-.|+.....++.. |.+|..+|.+.++.+|+++|+++++ +++.+|.+.+.||.||++.|
T Consensus 81 ~~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~G~v~~e~L~~al~-~~T~LVSim~aNnE~G~IQp 159 (386)
T COG1104 81 AALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSNGLVDLEQLEEALR-PDTILVSIMHANNETGTIQP 159 (386)
T ss_pred hHHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCCCeEcHHHHHHhcC-CCceEEEEEecccCeeeccc
Confidence 3 22 4678999999998776666654 9999999998888999999999998 78999999999999999999
Q ss_pred HHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHH-HHHH------Hh
Q 014492 237 DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII-EYLW------RA 308 (423)
Q Consensus 237 ~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~-~~l~------~~ 308 (423)
++++.++|+. ++++++|.+++..- -+ -.+....-++...|-+|..|..| +|.++.++.+. ..+. +-
T Consensus 160 I~ei~~i~k~~~i~fHvDAvQa~Gk---ip-i~~~~~~vD~ls~SaHK~~GpkG--iGaLyv~~~~~~~p~i~GGgQE~g 233 (386)
T COG1104 160 IAEIGEICKERGILFHVDAVQAVGK---IP-IDLEELGVDLLSFSAHKFGGPKG--IGALYVRPGVRLEPLIHGGGQERG 233 (386)
T ss_pred HHHHHHHHHHcCCeEEEehhhhcCc---ee-ccccccCcceEEeehhhccCCCc--eEEEEECCCCccCceeccCcCCCC
Confidence 9999999997 99999999998322 11 11222234466777889888778 68787654332 1111 11
Q ss_pred cCCCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccC-CCCeecCC----CceEEEEEeCCCCCHHHHHHH
Q 014492 309 KQPYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDV-PFLNPYPS----YSNFILCEVTSGMDAKKLKDD 382 (423)
Q Consensus 309 ~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~p~----~~~~~~~~~~~~~~~~~l~~~ 382 (423)
.+..+.|.++..+...+++. .+.++....++...|++|.+.|.+. +.+.+... -.+.+.+.+| +...+.+...
T Consensus 234 ~RsGTenv~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~-gv~gE~ll~~ 312 (386)
T COG1104 234 LRSGTENVPGIVGFGKAAEIAVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFP-GVEGESLLLA 312 (386)
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeC-CCcHHHHHHh
Confidence 23356788887777777765 3557778888999999999999875 65554332 3456677787 7889999999
Q ss_pred HHhCCcEEEeCCCC-------------------CCCCeEEEEecChhhHHHHHHHHhh
Q 014492 383 LAKMGVMIRHYNNK-------------------ELKGYVRVSVGKPEHTDALMECLMH 421 (423)
Q Consensus 383 L~~~gI~v~~~~~~-------------------~~~~~iRis~~~~~~~~~l~~al~~ 421 (423)
|..+||.+..|+.. ...+.||||++...+.++++.+++.
T Consensus 313 L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~ 370 (386)
T COG1104 313 LDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEA 370 (386)
T ss_pred ccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHH
Confidence 99999999977651 1136899999854444444444443
No 175
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.93 E-value=1.1e-24 Score=214.00 Aligned_cols=271 Identities=18% Similarity=0.187 Sum_probs=189.9
Q ss_pred eeEcCCCCCCCCCCHHHHHHHhcC--CC-CCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeE
Q 014492 97 IVKIDANENPYGPPPEVREALGQL--KF-PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKI 173 (423)
Q Consensus 97 ~i~l~~~~~~~~~~~~v~~al~~~--~~-~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~V 173 (423)
.|.++.... +..+.++.+..... .+ ..+|+++...+|++++|+++|.++. + ++++++.++..++.+++++||+|
T Consensus 31 pi~~~~~~~-~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~Le~~lA~l~G~~~~-~-~~~sG~~Ai~~~l~~~l~~Gd~V 107 (398)
T PRK07504 31 ALFLTQGFV-YDTAEAAEARFKGEDPGFIYSRYSNPTVDMFEKRMCALEGAEDA-R-ATASGMAAVTAAILCQVKAGDHV 107 (398)
T ss_pred CeECCCCcc-CCCHHHHHHHhccCcCCceeecCCCchHHHHHHHHHHHhCCCee-e-EecCHHHHHHHHHHHHhCCCCEE
Confidence 367766432 23334443333211 11 1457888889999999999998654 3 45566778877777789999999
Q ss_pred EEcCCCchhhHHH----HHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CC
Q 014492 174 VDCPPTFTMYEFD----AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PI 248 (423)
Q Consensus 174 l~~~p~y~~~~~~----~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~ 248 (423)
+++.|.|..+... ++..|++++.++ ..|+++++++++ +++|+|++++|+||||.+++.+++.++++. |+
T Consensus 108 l~~~~~y~~~~~~~~~~~~~~G~~v~~vd-----~~d~e~l~~ai~-~~tklV~lesp~NptG~v~dl~~I~~la~~~gi 181 (398)
T PRK07504 108 VAARALFGSCRYVVETLLPRYGIESTLVD-----GLDLDNWEKAVR-PNTKVFFLESPTNPTLEVIDIAAVAKIANQAGA 181 (398)
T ss_pred EEcCCchhHHHHHHHHHHhhcCeEEEEEC-----CCCHHHHHHhcC-cCceEEEEECCCCCCcEecCHHHHHHHHHHcCC
Confidence 9999999865433 345799998886 478999999996 689999999999999999999999999987 99
Q ss_pred EEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCcccc-ccccCHHHHHH-HHHhcC--CCCCcHHHHHHHHH
Q 014492 249 LVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVG-YGAFPLSIIEY-LWRAKQ--PYNVSVAAEVAACA 324 (423)
Q Consensus 249 ~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G-~i~~~~~~~~~-l~~~~~--~~~~~~~~~~a~~~ 324 (423)
++|+|++|..+... ... ..+..+++.|+||.++.+|.|+| +++++++.+.+ +..... ...+++..+..+..
T Consensus 182 ~lvvD~a~a~~~~~-~~~----~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~~~~g~~~s~~~A~~~l~ 256 (398)
T PRK07504 182 KLVVDNVFATPLFQ-KPL----ELGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFRHTGPSLSPFNAWTLLK 256 (398)
T ss_pred EEEEECCccccccC-Cch----hhCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHh
Confidence 99999999865432 111 22456899999999988999985 67677776653 332211 23455555555554
Q ss_pred HhCChHHHHHHHHHHHHHHHHHHHHHccCCCCe-e-cC----------------CCceEEEEEeCCC-CCHHHHHHHHH
Q 014492 325 ALQNPIYLEKVKEALIKERERLFKLLKDVPFLN-P-YP----------------SYSNFILCEVTSG-MDAKKLKDDLA 384 (423)
Q Consensus 325 ~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~p----------------~~~~~~~~~~~~~-~~~~~l~~~L~ 384 (423)
.| +.+..+.++..++..++.+.|++.+.+. + +| +.|..+.+++.++ .....|++.|.
T Consensus 257 ~L---~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~~~~~l~ 332 (398)
T PRK07504 257 GL---ETLPVRVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKGGKEAAFRFLNALK 332 (398)
T ss_pred cc---chHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCCCHHHHHHHHHhCC
Confidence 44 4466667777788999999998876543 1 22 2366778888532 22344555553
No 176
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.93 E-value=1.2e-24 Score=211.54 Aligned_cols=293 Identities=17% Similarity=0.128 Sum_probs=208.8
Q ss_pred CCCHHHHHHHhcCC-CCCCCCC------c-----chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcC----CC-
Q 014492 108 GPPPEVREALGQLK-FPYIYPD------P-----ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLD----PG- 170 (423)
Q Consensus 108 ~~~~~v~~al~~~~-~~~~Y~~------~-----g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~----~g- 170 (423)
++++.+.+++.+.. .....|. . -.+++|+.+++++|+++++|++|+|++++++.++..+.. +|
T Consensus 9 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~ 88 (353)
T TIGR03235 9 PIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGEQKGK 88 (353)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcccCCC
Confidence 45678888886521 1011111 0 145899999999999999999999999999999987753 55
Q ss_pred CeEEEcCCCchhhH---HHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-
Q 014492 171 DKIVDCPPTFTMYE---FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM- 246 (423)
Q Consensus 171 d~Vl~~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~- 246 (423)
+.|++....|+.+. ..++..|++++.++.+.++.+|++++++.++ +++++|++++++||||.+++.+++.++++.
T Consensus 89 ~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~-~~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~ 167 (353)
T TIGR03235 89 KHIITSAIEHPAVLEPIRALERNGFTVTYLPVDESGRIDVDELADAIR-PDTLLVSIMHVNNETGSIQPIREIAEVLEAH 167 (353)
T ss_pred CeeeEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhCC-CCCEEEEEEcccCCceeccCHHHHHHHHHHc
Confidence 77888877776443 3345579999999987777899999999996 689999999999999999999999999987
Q ss_pred CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHH--HH---------hcCCCCCc
Q 014492 247 PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYL--WR---------AKQPYNVS 315 (423)
Q Consensus 247 ~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l--~~---------~~~~~~~~ 315 (423)
|+++|+|+++...... ..+...+..+++.|.+|.+|.+| +|+++.+++..... .. ....++.+
T Consensus 168 ~~~~ivD~a~~~g~~~----~~~~~~~~D~~~~s~~K~~gp~g--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (353)
T TIGR03235 168 EAFFHVDAAQVVGKIT----VDLSADRIDLISCSGHKIYGPKG--IGALVIRKRGKPKAPLKPIMFGGGQERGLRPGTLP 241 (353)
T ss_pred CCEEEEEchhhcCCcc----ccccccCCCEEEeehhhcCCCCc--eEEEEEccCcccccccCceeeCCCCcCccccCCCC
Confidence 9999999998743321 11223345578889999876556 79888877643221 11 01124455
Q ss_pred HHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeec-CCC---ceEEEEEeCCCCCHHHHHHHHHhCCcEE
Q 014492 316 VAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPY-PSY---SNFILCEVTSGMDAKKLKDDLAKMGVMI 390 (423)
Q Consensus 316 ~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~~---~~~~~~~~~~~~~~~~l~~~L~~~gI~v 390 (423)
.....++.++++. .+..++.+++++++++++++.|++.+ +.+. +.. ..++.+.++ +.+.+++.+.|.+ ||.+
T Consensus 242 ~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~g-~~~~~~~~~~~~~i~~~~~~-~~~~~~v~~~L~~-~i~v 318 (353)
T TIGR03235 242 VHLIVGMGEAAEIARRNAQAWEVKLRAMRNQLRDALQTLG-VKLNGDPAETIPHILNFSID-GVNSEALIVNLRA-DAAV 318 (353)
T ss_pred hHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCC-eEEeCCcccccCCEEEEEeC-CcCHHHHHHHHhC-CeEE
Confidence 6665666666553 23467788999999999999998854 4432 221 234555555 6788899999965 8999
Q ss_pred EeCCCCC----CCCeEEEEecChh
Q 014492 391 RHYNNKE----LKGYVRVSVGKPE 410 (423)
Q Consensus 391 ~~~~~~~----~~~~iRis~~~~~ 410 (423)
++|..+. .+.++|.+++..+
T Consensus 319 ~~g~~~~~~~~~~~~~l~~~g~~~ 342 (353)
T TIGR03235 319 STGSACSSSKYEPSHVLQAMGLDT 342 (353)
T ss_pred EchhhcCCCCCCCCHHHHHcCCCH
Confidence 9876532 2346888887654
No 177
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.93 E-value=3.1e-24 Score=209.85 Aligned_cols=281 Identities=19% Similarity=0.195 Sum_probs=204.5
Q ss_pred CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchh----hHHHHHHCCCeEEEecC
Q 014492 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPR 199 (423)
Q Consensus 124 ~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~ 199 (423)
.+|+++...+|++.+++++|. +.+++++|+++++..++.+++++||+|+++.+.|.. +...++..|++++.++.
T Consensus 49 ~r~~~p~~~~le~~la~l~g~--~~~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~ 126 (380)
T TIGR01325 49 SRYANPTVAAFEERIAALEGA--ERAVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDP 126 (380)
T ss_pred ecCCCchHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECC
Confidence 457778889999999999996 467889999999999999999999999999988853 34456678999999875
Q ss_pred CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEE
Q 014492 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (423)
Q Consensus 200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i 278 (423)
+ |++++++.+. +++++|++++|+||+|.+.+.+++.++|+. |+++|+|++|..+.... .. ..+..+++
T Consensus 127 ~-----d~~~l~~~i~-~~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~~~~~~-pl----~~g~Divv 195 (380)
T TIGR01325 127 T-----DLNAWEAAVK-PNTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFATPVLQQ-PL----KLGADVVV 195 (380)
T ss_pred C-----CHHHHHHhcC-CCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCC-ch----hhCCCEEE
Confidence 3 7899999886 689999999999999999999999999987 99999999998654322 11 22345888
Q ss_pred ccChhhhcccCccc-cccccCHHHHHHHHHhcCCC--CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCC
Q 014492 279 RTFSKRAGLAGLRV-GYGAFPLSIIEYLWRAKQPY--NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPF 355 (423)
Q Consensus 279 ~S~SK~~g~~G~R~-G~i~~~~~~~~~l~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 355 (423)
.|++|.++.+|.++ |++++++++++.+......+ .+++... ..++...+.+..+.++..+++.++.+.|++.+.
T Consensus 196 ~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~~~~g~~~~p~~a---~~~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~ 272 (380)
T TIGR01325 196 YSATKHIDGQGRVMGGVIAGSEELMAEVAVYLRHTGPAMSPFNA---WVLLKGLETLSLRMQKQFDSALAIAEWLQAQPQ 272 (380)
T ss_pred eeccceecCCCCeEEEEEEeCHHHHHHHHHHHHhhCCCCCHHHH---HHHHhccCcHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 89999998788776 78888888888877654433 3344443 334444455667778888899999999998764
Q ss_pred Ce-e-cC----------------CCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCC----------C------------
Q 014492 356 LN-P-YP----------------SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYN----------N------------ 395 (423)
Q Consensus 356 ~~-~-~p----------------~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~----------~------------ 395 (423)
+. + +| ..|..+.+++.+......|.+.|.--.+.+.-|+ .
T Consensus 273 v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~ 352 (380)
T TIGR01325 273 VQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVADRAAAWKVLDAVELVSITNNLGDAKSTITHPATTTHGRMQPEERAA 352 (380)
T ss_pred ccEEECCCCCCCccHHHHHhhCCCCceEEEEEECCHHHHHHHHHcCCcceEcccCCCCCeeeeCCCccCcccCCHHHHHh
Confidence 43 1 22 2355677888521224455555531111111111 0
Q ss_pred -CCCCCeEEEEecChhhHHHHHHHHhh
Q 014492 396 -KELKGYVRVSVGKPEHTDALMECLMH 421 (423)
Q Consensus 396 -~~~~~~iRis~~~~~~~~~l~~al~~ 421 (423)
.-.++.||||++.++ .++|.+-+++
T Consensus 353 ~gi~~~liR~svGlE~-~~dl~~dl~~ 378 (380)
T TIGR01325 353 AGIGDGLVRLSVGLED-VDDLIADLKR 378 (380)
T ss_pred cCCCCCeEEEEeccCC-HHHHHHHHHh
Confidence 011468999999876 4777666553
No 178
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.93 E-value=3.7e-24 Score=209.89 Aligned_cols=216 Identities=15% Similarity=0.142 Sum_probs=169.2
Q ss_pred CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhH----HHHHHCCCeEEEecCC
Q 014492 125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPRK 200 (423)
Q Consensus 125 ~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~~ 200 (423)
+|+++...+|++.++++.|. +..++++++++++..++.+++++||+|+++.|+|.... ..++..|++++.++
T Consensus 60 r~~~p~~~~le~~lA~l~g~--~~~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd-- 135 (398)
T PRK08249 60 RNTNPTVQAFEEKVRILEGA--EAATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCE-- 135 (398)
T ss_pred CCCChHHHHHHHHHHHHhCC--CeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcC--
Confidence 56778889999999999995 34556666678999999989999999999999998643 34556899988876
Q ss_pred CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEc
Q 014492 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR 279 (423)
Q Consensus 201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~ 279 (423)
..|+++++++++ +++++|++++|+||||.+.+.+++.++++. |+++|+|++|..+.... .. ..+..+++.
T Consensus 136 ---~~d~e~l~~~i~-~~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~~~~~~-~l----~~~~Divv~ 206 (398)
T PRK08249 136 ---TGDHEQIEAEIA-KGCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFATPINQN-PL----ALGADLVIH 206 (398)
T ss_pred ---CCCHHHHHHhcC-CCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCccccCC-ch----hhCCCEEec
Confidence 358999999997 689999999999999999999999999987 99999999998654322 11 123348889
Q ss_pred cChhhhcccCccc-cccccCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCC
Q 014492 280 TFSKRAGLAGLRV-GYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFL 356 (423)
Q Consensus 280 S~SK~~g~~G~R~-G~i~~~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 356 (423)
|+||.+|..|.++ |++++++++++++...+.. ..+++..+..+...+ +.+..+.++..+++.++.+.|++.+.+
T Consensus 207 S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~~~~g~~~s~~~a~l~l~~l---~tL~~R~~~~~~na~~la~~L~~~p~v 283 (398)
T PRK08249 207 SATKFLSGHADALGGVVCGSKELMEQVYHYREINGATMDPMSAYLILRGM---KTLKLRVRQQQESAMALAKYLQTHPKV 283 (398)
T ss_pred cCceecCCCCCceEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhCc---chHHHHHHHHHHHHHHHHHHHHcCCCe
Confidence 9999998667665 7788888888888765543 345666555544444 445666777788999999999887644
No 179
>PRK07505 hypothetical protein; Provisional
Probab=99.93 E-value=1.4e-23 Score=207.51 Aligned_cols=314 Identities=15% Similarity=0.097 Sum_probs=205.0
Q ss_pred CCCCCeeEcCCCCC-CCCCCHHHHHHHhc-CC-CC--C-C-----CCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHH
Q 014492 92 RKPEDIVKIDANEN-PYGPPPEVREALGQ-LK-FP--Y-I-----YPDPESRRLRAALAKDSGLESDHILVGCGADELID 160 (423)
Q Consensus 92 ~~~~~~i~l~~~~~-~~~~~~~v~~al~~-~~-~~--~-~-----Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~ 160 (423)
.+++.++|+..+.+ .+..+|++.+|+.+ +. ++ . . +......++++.++++++. +.+++++| +++..
T Consensus 43 ~~g~~~ld~~s~~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~~~--~~~~~~sG-~~a~~ 119 (402)
T PRK07505 43 ADGHTFVNFVSCSYLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELFGA--SVLTFTSC-SAAHL 119 (402)
T ss_pred cCCceEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHhCC--CEEEECCh-HHHHH
Confidence 45678999976422 22567999988876 22 11 1 1 1122356899999999986 55556655 45777
Q ss_pred HHHHHhc----CCCC-eEEEcCCCch-hhH--HHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcC
Q 014492 161 LIMRCVL----DPGD-KIVDCPPTFT-MYE--FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDG 232 (423)
Q Consensus 161 ~~~~~l~----~~gd-~Vl~~~p~y~-~~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG 232 (423)
.++..+. .+|+ .|++.+..|+ ... ......+.+++.+|. .|++++++.+. .+++++++++|+||||
T Consensus 120 ~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~-----~d~~~l~~~~~-~~~~~~vl~~p~~~~G 193 (402)
T PRK07505 120 GILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDH-----NDLDALEDICK-TNKTVAYVADGVYSMG 193 (402)
T ss_pred HHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCC-----CCHHHHHHHHh-cCCCEEEEEecccccC
Confidence 6665432 2232 3656665554 321 112224567777773 48899999886 4678999999999999
Q ss_pred cCCCHHHHHHHHcC-CCEEEEccCCccccCC--Cc--hhhhhc--cCCcEEEEccChhhhcccCcccccccc-CHHHHHH
Q 014492 233 SIINDEDLLKILEM-PILVVLDEAYTEFSGL--ES--RMEWVK--KHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEY 304 (423)
Q Consensus 233 ~~~~~~~l~~i~~~-~~~li~Deay~~~~~~--~~--~~~~~~--~~~~~i~i~S~SK~~g~~G~R~G~i~~-~~~~~~~ 304 (423)
.+++.+++.+||+. ++++|+||+|....++ +. ...... ..+++++++|+||.+|++| ||++. ++++++.
T Consensus 194 ~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~G---g~~~~~~~~~~~~ 270 (402)
T PRK07505 194 GIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGASG---GVIMLGDAEQIEL 270 (402)
T ss_pred CcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhccC---eEEEeCCHHHHHH
Confidence 99999999999987 9999999999643222 11 122233 3677899999999999777 88764 7888888
Q ss_pred HHHhcCCC----CCcHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHH
Q 014492 305 LWRAKQPY----NVSVAAEVAACAALQ--NPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKK 378 (423)
Q Consensus 305 l~~~~~~~----~~~~~~~~a~~~~l~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 378 (423)
+.....++ +++++++.++.++++ ..+++.+..++++++.+.+...+... +......+.++.+++..++.+
T Consensus 271 ~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~~g~~~~i~~~~~~~~~~~~~ 346 (402)
T PRK07505 271 ILRYAGPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPTE----QSGSFLPIRLIYIGDEDTAIK 346 (402)
T ss_pred HHHhCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhc----CCCCCCCEEEEEeCCHHHHHH
Confidence 87766654 355677777777775 33445555566665555443332111 011111222334432234678
Q ss_pred HHHHHHhCCcEEEeCCCCC---CCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 379 LKDDLAKMGVMIRHYNNKE---LKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 379 l~~~L~~~gI~v~~~~~~~---~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
+.+.|.++||.+++...+. ..++|||+++ +.++++++.++|++
T Consensus 347 ~~~~l~~~Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~ 395 (402)
T PRK07505 347 AAKQLLDRGFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKE 395 (402)
T ss_pred HHHHHHHCCCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHH
Confidence 9999999999999864432 3469999998 77777777777765
No 180
>PLN02651 cysteine desulfurase
Probab=99.93 E-value=4.5e-24 Score=208.33 Aligned_cols=306 Identities=18% Similarity=0.120 Sum_probs=217.1
Q ss_pred EcCCCCCCCCCCHHHHHHHhcCC-CCCCCCC-----------cchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh
Q 014492 99 KIDANENPYGPPPEVREALGQLK-FPYIYPD-----------PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV 166 (423)
Q Consensus 99 ~l~~~~~~~~~~~~v~~al~~~~-~~~~Y~~-----------~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l 166 (423)
+|+.+... +.++.+.+++.+.. .....|. .-.+++|+.+++++|.++++|++|+|++++++.++..+
T Consensus 2 Yld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~ 80 (364)
T PLN02651 2 YLDMQATT-PIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGV 80 (364)
T ss_pred cccCcCCC-CCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHH
Confidence 45554443 45688888886521 1111111 11457899999999998899999999999988877654
Q ss_pred ----cCCCCeEEEcCCCchhhHHH---HHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHH
Q 014492 167 ----LDPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239 (423)
Q Consensus 167 ----~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~ 239 (423)
.++||+|++....|+.+... ++..|++++.++.+.++.+|++++++.++ ++++++++++++|+||.+.|.++
T Consensus 81 ~~~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~-~~t~lv~v~~~~n~tG~~~~l~~ 159 (364)
T PLN02651 81 MHFYKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKSDGLVDLDELAAAIR-PDTALVSVMAVNNEIGVIQPVEE 159 (364)
T ss_pred HHhccCCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcC-CCcEEEEEECCCCCceecccHHH
Confidence 47899999998888754433 33579999999987777899999999997 68999999999999999999999
Q ss_pred HHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHh---------c
Q 014492 240 LLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA---------K 309 (423)
Q Consensus 240 l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~---------~ 309 (423)
+.++|+. |+++++|.+++..... ..+...+-.+++.|.+|.+| ...+|+++.+++....+... .
T Consensus 160 I~~~~~~~g~~~~vD~a~~~g~~~----~~~~~~~~D~~~~s~hK~~g--p~G~g~l~v~~~~~~~l~p~~~g~~~~~~~ 233 (364)
T PLN02651 160 IGELCREKKVLFHTDAAQAVGKIP----VDVDDLGVDLMSISGHKIYG--PKGVGALYVRRRPRVRLEPLMSGGGQERGR 233 (364)
T ss_pred HHHHHHHcCCEEEEEcchhhCCcc----cCcccCCCCEEEechhhhCC--CCceEEEEEcCCCCCCCCccccCCCccCCc
Confidence 9999997 9999999999843211 11223455688899999533 33478888876554433211 1
Q ss_pred CCCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHcc-CCCCeecCC------CceEEEEEeCCCCCHHHHHH
Q 014492 310 QPYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKD-VPFLNPYPS------YSNFILCEVTSGMDAKKLKD 381 (423)
Q Consensus 310 ~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~p~------~~~~~~~~~~~~~~~~~l~~ 381 (423)
..++.+..+..++.++|+. .+..++.+++.++.++++.+.|++ ++++.+... ....+.+.++ +.+.+++..
T Consensus 234 ~~GT~~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~-~~~~~~~~~ 312 (364)
T PLN02651 234 RSGTENTPLVVGLGAACELAMKEMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFA-YVEGESLLM 312 (364)
T ss_pred cCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEeC-CCCHHHHHH
Confidence 2346677777777766654 223467788889999999999975 555554321 1346667776 778899999
Q ss_pred HHHhCCcEEEeCCCC--C-----------------CCCeEEEEecChhhHHHH
Q 014492 382 DLAKMGVMIRHYNNK--E-----------------LKGYVRVSVGKPEHTDAL 415 (423)
Q Consensus 382 ~L~~~gI~v~~~~~~--~-----------------~~~~iRis~~~~~~~~~l 415 (423)
.|.+ |.++.|... . ..+.||+|++...+.+++
T Consensus 313 ~L~~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~di 363 (364)
T PLN02651 313 GLKE--VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEV 363 (364)
T ss_pred HhCC--EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHc
Confidence 8865 888866531 1 137999999854444443
No 181
>PRK14012 cysteine desulfurase; Provisional
Probab=99.93 E-value=4.8e-24 Score=211.00 Aligned_cols=311 Identities=16% Similarity=0.104 Sum_probs=211.8
Q ss_pred eEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCC-----------cchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492 98 VKIDANENPYGPPPEVREALGQL-K--FPYIYPD-----------PESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (423)
Q Consensus 98 i~l~~~~~~~~~~~~v~~al~~~-~--~~~~Y~~-----------~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~ 163 (423)
++|+.+... +.++.+.+++.+. . ....-+. ...+++|+.+++++|.++++|++++|+++++++++
T Consensus 5 iyld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~~v~~~~g~t~al~~~l 83 (404)
T PRK14012 5 IYLDYSATT-PVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPREIVFTSGATESDNLAI 83 (404)
T ss_pred EEecCcCCC-CCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcCeEEEeCCHHHHHHHHH
Confidence 678776554 4567888887652 1 1000010 12457899999999998899999999999999988
Q ss_pred HHhc----CCCCeEEEcCCCchhhHHHH---HHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCC
Q 014492 164 RCVL----DPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236 (423)
Q Consensus 164 ~~l~----~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~ 236 (423)
.++. ++||.|++++++|+.+...+ +..|++++.++.++++.+|++++++.+. .+++++++++++||||.++|
T Consensus 84 ~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~~g~~d~~~l~~~i~-~~t~lv~~~~~~n~tG~~~~ 162 (404)
T PRK14012 84 KGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQSNGIIDLEKLEAAMR-DDTILVSIMHVNNEIGVIQD 162 (404)
T ss_pred HHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCCCCcCCHHHHHHhcC-CCCEEEEEECcCCCccchhh
Confidence 7764 78999999999997665443 3469999999987777899999999997 68999999999999999999
Q ss_pred HHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHh-------
Q 014492 237 DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA------- 308 (423)
Q Consensus 237 ~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~------- 308 (423)
.+++.++|+. |+++|+|++++..... . .+...+-.+++.|++|.+| |+ ++|+++.+++...++...
T Consensus 163 ~~~I~~la~~~g~~vivD~a~~~g~~~---~-~~~~~~~D~~~~s~~K~~g-p~-g~G~l~~~~~~~~~~~~~~~g~~~~ 236 (404)
T PRK14012 163 IAAIGEICRERGIIFHVDAAQSVGKVP---I-DLSKLKVDLMSFSAHKIYG-PK-GIGALYVRRKPRVRLEAQMHGGGHE 236 (404)
T ss_pred HHHHHHHHHHcCCEEEEEcchhcCCcc---c-CcccCCCCEEEEehhhccC-CC-ceEEEEEecCCCCCCCceecCCCcc
Confidence 9999999987 9999999999743211 1 1112334477789999776 43 588888876543222211
Q ss_pred --cCCCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCC------CceEEEEEeCCCCCHHHH
Q 014492 309 --KQPYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYPS------YSNFILCEVTSGMDAKKL 379 (423)
Q Consensus 309 --~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~------~~~~~~~~~~~~~~~~~l 379 (423)
....+.+.....+..+++.. ..+.++..++.++.++++.+.|++++.+.+.+. ...++++.+. +.+++
T Consensus 237 ~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~---~~~~~ 313 (404)
T PRK14012 237 RGMRSGTLPTHQIVGMGEAARIAKEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFNYV---EGESL 313 (404)
T ss_pred CCccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEeCc---CHHHH
Confidence 01123334333333344432 234556778888899999999988765554211 1224555543 34566
Q ss_pred HHHHHhCCcEEEeCCCC-------------------CCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 380 KDDLAKMGVMIRHYNNK-------------------ELKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 380 ~~~L~~~gI~v~~~~~~-------------------~~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
...|. ++.|..+... ...+.|||++. +.++.+++.++|+.
T Consensus 314 ~~~l~--~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~ 375 (404)
T PRK14012 314 IMALK--DLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRK 375 (404)
T ss_pred HHhCC--CeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHH
Confidence 66663 6666544220 12478999986 45666667666654
No 182
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.93 E-value=7.1e-24 Score=207.74 Aligned_cols=279 Identities=19% Similarity=0.194 Sum_probs=199.1
Q ss_pred CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhH----HHHHHCCCeEEEecCC
Q 014492 125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPRK 200 (423)
Q Consensus 125 ~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~~ 200 (423)
+|+++...++++.+++++|. +++++++|+++++..++.+++++||+|+++.+.|.... ..++..|++++.++.+
T Consensus 57 r~~~p~~~~le~~la~l~g~--~~~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~ 134 (390)
T PRK08133 57 RFTNPTVTMFQERLAALEGA--EACVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLT 134 (390)
T ss_pred CCCChHHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECCC
Confidence 45666678999999999995 46888999999999999999999999999999886433 3456689999999853
Q ss_pred CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEc
Q 014492 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR 279 (423)
Q Consensus 201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~ 279 (423)
|++++++.++ +++|+|++++|+||||.+.+.+++.++|+. |+++|+|++|....... +. ..+..+++.
T Consensus 135 -----d~~~l~~~i~-~~tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD~t~~~~~~~~-pl----~~g~Divv~ 203 (390)
T PRK08133 135 -----DLDAWRAAVR-PNTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCFCTPALQQ-PL----KLGADVVIH 203 (390)
T ss_pred -----CHHHHHHhcC-cCCeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEECCCcccccCC-ch----hhCCcEEEe
Confidence 7899999997 689999999999999999999999999987 99999999997544321 11 123358899
Q ss_pred cChhhhcccCccc-cccccCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCC
Q 014492 280 TFSKRAGLAGLRV-GYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFL 356 (423)
Q Consensus 280 S~SK~~g~~G~R~-G~i~~~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 356 (423)
|+||.++.+|.++ |+++++++.++++...... ..+++..+. .+++..+.+..+.++..+++..+.+.|++.+.+
T Consensus 204 S~sK~~~g~g~~~GG~vv~~~~~~~~~~~~~~~~g~~~~~~~a~---~~l~gl~tl~~R~~~~~~~a~~la~~L~~~p~v 280 (390)
T PRK08133 204 SATKYLDGQGRVLGGAVVGSKELMEEVFGFLRTAGPTLSPFNAW---VFLKGLETLSLRMEAHSANALALAEWLEAHPGV 280 (390)
T ss_pred ecceeecCCcceEeEEEEcCHHHHHHHHHHHHHhCCCCCHHHHH---HHHcccchHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 9999998889887 6777888877766644333 234444433 344444466777777788999999999887644
Q ss_pred e-e-cC----------------CCceEEEEEeCCC-CCHHHHHHHHHhCCcEEE----------eCCC-----C------
Q 014492 357 N-P-YP----------------SYSNFILCEVTSG-MDAKKLKDDLAKMGVMIR----------HYNN-----K------ 396 (423)
Q Consensus 357 ~-~-~p----------------~~~~~~~~~~~~~-~~~~~l~~~L~~~gI~v~----------~~~~-----~------ 396 (423)
. + +| +.|..+.+++.++ .....|++.|.--.+.+. |... .
T Consensus 281 ~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~ 360 (390)
T PRK08133 281 ERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKGGREAAWRVIDATRLISITANLGDTKTTITHPATTTHGRLSPEARAA 360 (390)
T ss_pred eEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCHHHHHHHHHhCCcceEeccCCCcceeeecCCCCCcccCCHHHHHh
Confidence 3 1 22 2355677788532 123445555531111111 1110 0
Q ss_pred --CCCCeEEEEecChhhHHHHHHHHh
Q 014492 397 --ELKGYVRVSVGKPEHTDALMECLM 420 (423)
Q Consensus 397 --~~~~~iRis~~~~~~~~~l~~al~ 420 (423)
-.++.||||++.++ .|+|.+-|+
T Consensus 361 ~gi~~~liR~svGlE~-~~dl~~dl~ 385 (390)
T PRK08133 361 AGITEGLIRVAVGLED-VADIKADLA 385 (390)
T ss_pred cCCCCCeEEEEeCcCC-HHHHHHHHH
Confidence 11468999999875 466665554
No 183
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.93 E-value=1.3e-23 Score=206.11 Aligned_cols=319 Identities=15% Similarity=0.159 Sum_probs=207.9
Q ss_pred CCCCCeeEcCCCCC--CCC-CCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHhCC--CCCcEEEeCCHHHHHHHHHHH
Q 014492 92 RKPEDIVKIDANEN--PYG-PPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGL--ESDHILVGCGADELIDLIMRC 165 (423)
Q Consensus 92 ~~~~~~i~l~~~~~--~~~-~~~~v~~al~~-~~~~~~Y~~~g~~~lr~~ia~~~g~--~~~~i~~t~G~~~al~~~~~~ 165 (423)
..++.++|+..|.. .++ .+|++.+++.+ +......+.....++++.+++++.- ..+.+++++++++++..+++.
T Consensus 26 ~~G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~~~sG~~a~~~A~~~ 105 (377)
T PRK02936 26 NNGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIWHVSNLFTNSLQEEVASLLAENSAGDLVFFCNSGAEANEAALKL 105 (377)
T ss_pred CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhcCCCCEEEEeCCcHHHHHHHHHH
Confidence 45678999988752 233 56888888876 3221112222334566666666642 135899999999999999984
Q ss_pred hc-CCC-CeEEEcCCCchhhHHH-HHHCCCeEE---EecCCCC--C--CCCHHHHHHHhhcCCceEEEEcCCCCCcCcCC
Q 014492 166 VL-DPG-DKIVDCPPTFTMYEFD-AAVNGAAVV---KVPRKSD--F--SLNVELIADAVEREKPKCIFLTSPNNPDGSII 235 (423)
Q Consensus 166 l~-~~g-d~Vl~~~p~y~~~~~~-~~~~g~~~~---~v~~~~~--~--~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~ 235 (423)
.. -+| +.|++.++.|+..... ....+.... ..|...+ + ..|++++++.+. .++++|+++.+++++|...
T Consensus 106 a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~ii~e~i~~~~G~~~ 184 (377)
T PRK02936 106 ARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMN-EEVAAVMLEVVQGEGGVIP 184 (377)
T ss_pred HHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhcc-CCeEEEEEecccCCCCCcc
Confidence 32 234 6789999988743322 222222111 1111111 0 127899999886 6799999999999999774
Q ss_pred -CHHHHH---HHHcC-CCEEEEccCCccccCCCchhh--hhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHh
Q 014492 236 -NDEDLL---KILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA 308 (423)
Q Consensus 236 -~~~~l~---~i~~~-~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~ 308 (423)
+.+.++ ++|+. |+++|+||+|.+|...+.... .....+. +.++||.++ +|+|+||+++++++.+.+...
T Consensus 185 ~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~~~~~d---i~t~sK~l~-~G~~ig~v~~~~~~~~~~~~~ 260 (377)
T PRK02936 185 ADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGLDPD---IVTVAKGLG-NGIPVGAMIGKKELGTAFGPG 260 (377)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhhCCCCc---EEEEccccc-CCCccEEEEEcHHHHhhccCC
Confidence 545554 45554 999999999988765443221 1222222 236899999 999999999999998887643
Q ss_pred cC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc----CCCCeecCCCceEEEEEeCCCCCHHHHHHH
Q 014492 309 KQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKD----VPFLNPYPSYSNFILCEVTSGMDAKKLKDD 382 (423)
Q Consensus 309 ~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~ 382 (423)
.. .++.+++.+.++.++|+..+ .+...++++++.+++.+.|++ ++.+....+.|.++|+++++ +...+.+.
T Consensus 261 ~~~~t~~~~~~~~aaa~a~l~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~--~~~~~~~~ 337 (377)
T PRK02936 261 SHGSTFGGNPLAMAAAKEVLQVIK-QPSFLEEVQEKGEYFLQKLQEELEHLECVKNIRGKGLMIGIECTE--EVAPVIEQ 337 (377)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEeecceEEEEEecc--hHHHHHHH
Confidence 32 35789999999999986531 123445555566666665554 44333234567899999963 36778888
Q ss_pred HHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 383 LAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 383 L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
|.++||.+.+.+ .+++||++....+.+++.+++++|
T Consensus 338 l~~~gv~v~~~g----~~~lRi~p~~~~~~~~i~~~i~~l 373 (377)
T PRK02936 338 LREEGLLVLSAG----PNVIRLLPPLVVTKEELDQAVYLL 373 (377)
T ss_pred HHHCCeEEecCC----CCEEEEECCcccCHHHHHHHHHHH
Confidence 889999998754 579999974333346666666655
No 184
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.93 E-value=2.2e-23 Score=204.52 Aligned_cols=311 Identities=14% Similarity=0.122 Sum_probs=209.2
Q ss_pred CCCCCCHHHHHHHhcC--CCC-------CCCCCc-chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEE
Q 014492 105 NPYGPPPEVREALGQL--KFP-------YIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIV 174 (423)
Q Consensus 105 ~~~~~~~~v~~al~~~--~~~-------~~Y~~~-g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl 174 (423)
-.+..+|+++++..+. .++ ..|+.. ...+|++++|+++|.+ +.+++++|.++.. .++.+++++||.|+
T Consensus 9 Lgl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g~e-~al~~~sG~~a~~-~~i~~l~~~GD~Vl 86 (392)
T PLN03227 9 LSTSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLGTE-SAILYSDGASTTS-STVAAFAKRGDLLV 86 (392)
T ss_pred cCCCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhCCC-cEEEecCcHHHHH-HHHHHhCCCCCEEE
Confidence 3445677777665542 111 125433 5789999999999975 7888999988777 56666899999999
Q ss_pred EcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhh----------cCCceEEEEcCCCCCcCcCCCHHHHHHHH
Q 014492 175 DCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE----------REKPKCIFLTSPNNPDGSIINDEDLLKIL 244 (423)
Q Consensus 175 ~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~----------~~~~~~i~l~~p~NPtG~~~~~~~l~~i~ 244 (423)
++.+.|..+...++..+++++.++..+ .-|++.+.+.+. ..++++|++++++||+|.+.+.+++.++|
T Consensus 87 ~~~~~h~s~~~~~~l~~~~~~~~~~~d--~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~~i~~l~ 164 (392)
T PLN03227 87 VDRGVNEALLVGVSLSRANVRWFRHND--MKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLKELVALK 164 (392)
T ss_pred EeccccHHHHHHHHHcCCeEEEeCCCC--HHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCHHHHHHHH
Confidence 999999988887778888888777421 123444444443 13578899999999999999999999999
Q ss_pred cC-CCEEEEccCCccccCCC---chhhhhc---cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC--CCC-
Q 014492 245 EM-PILVVLDEAYTEFSGLE---SRMEWVK---KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNV- 314 (423)
Q Consensus 245 ~~-~~~li~Deay~~~~~~~---~~~~~~~---~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~--~~~- 314 (423)
+. |+++|+||+|.....+. ......+ ..+.++++.|+||.+|..| |++++++++++.+...... ++.
T Consensus 165 ~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g~~g---g~v~~~~~~~~~~~~~~~~~~~~~~ 241 (392)
T PLN03227 165 EEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFGSVG---GMTVGSEEVVDHQRLSGSGYCFSAS 241 (392)
T ss_pred HHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhhccC---cEEecCHHHHHHHHHhCcCccccCC
Confidence 87 99999999998222221 1112111 2345789999999876444 9998999988777544322 333
Q ss_pred -cHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCC--Ce--------ecCCCceEEEEEeCCCCC--------
Q 014492 315 -SVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPF--LN--------PYPSYSNFILCEVTSGMD-------- 375 (423)
Q Consensus 315 -~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~--~~--------~~p~~~~~~~~~~~~~~~-------- 375 (423)
++..+.++..++......++.+++++++.+++.+.|++.+. +. .....++++.+.+.+...
T Consensus 242 ~~p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~ 321 (392)
T PLN03227 242 APPFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTNSSHPYALKLRNRLVITSDPISPIIYLRLSDQEATRRTDETL 321 (392)
T ss_pred CCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCccccccccccccCCCCCCCEEEEEeCCHHHhhhhhhhh
Confidence 46566666655543211346677888888999998875321 10 112346778888853211
Q ss_pred -HHHHHHHHHhCCcEEEeCCC-------CCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 376 -AKKLKDDLAKMGVMIRHYNN-------KELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 376 -~~~l~~~L~~~gI~v~~~~~-------~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
..++++.|.++|+.+.+... ...+..+|+++....+.++++++++.|
T Consensus 322 ~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~eei~~~~~~l 376 (392)
T PLN03227 322 ILDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRVVANASHTREDIDKLLTVL 376 (392)
T ss_pred HHHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEEEecCCCCHHHHHHHHHHH
Confidence 24788889999999975221 122568999998544445555555443
No 185
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.93 E-value=2.5e-23 Score=202.32 Aligned_cols=275 Identities=20% Similarity=0.195 Sum_probs=193.9
Q ss_pred CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHH----HHCCCeEEEecC
Q 014492 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPR 199 (423)
Q Consensus 124 ~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~ 199 (423)
.+||++...+|++++++++ ..+.+++ +++++++..++.+++++||+|+++.|+|..+...+ +..|++++.++.
T Consensus 46 ~ry~~p~~~~Le~~lA~l~--~~~~v~~-~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~ 122 (366)
T PRK07582 46 GRASNPTWRALEAALGELE--GAEALVF-PSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPT 122 (366)
T ss_pred ECCCCccHHHHHHHHHHHc--CCCEEEE-CCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECC
Confidence 5689999999999999999 3455555 45557999999989999999999999998776544 347999999986
Q ss_pred CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEE
Q 014492 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (423)
Q Consensus 200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i 278 (423)
++.+ + .+. +++++|++++|+||||.+.+.+++.++|+. |+++|+|++|..... ..+.. .+..+++
T Consensus 123 ~~~~----~----~~~-~~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~~~-~~p~~----~g~Divv 188 (366)
T PRK07582 123 AGMA----E----AAL-AGADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATPLG-QRPLE----LGADLVV 188 (366)
T ss_pred CChH----H----Hhc-cCceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCccc-cCchh----cCCcEEE
Confidence 4321 1 222 578999999999999999999999999987 999999999964321 11221 2234888
Q ss_pred ccChhhhc-ccCcccccccc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC
Q 014492 279 RTFSKRAG-LAGLRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP 354 (423)
Q Consensus 279 ~S~SK~~g-~~G~R~G~i~~-~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 354 (423)
+|+||.++ .+|+|+||+++ ++++++++...+.. ..++++....+...++. ++.+.++..++...+.+.|++.+
T Consensus 189 ~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~a~l~~r~l~t---l~~R~~~~~~na~~la~~L~~~p 265 (366)
T PRK07582 189 ASDTKALTGHSDLLLGYVAGRDPELMAAVERWRLLAGAIPGPFEAWLAHRSLGT---LGLRFARQCANALAVAELLAGHP 265 (366)
T ss_pred ecccccccCCCCeeEEEEEcCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhcccc---HHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999874 46799999997 47787777655433 34566666656565553 45555677789999999998876
Q ss_pred CCe-e-cC----------------CCceEEEEEeCCCCCHHHHHHHHHhCCcEEEe---CCC---------C---CCCCe
Q 014492 355 FLN-P-YP----------------SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRH---YNN---------K---ELKGY 401 (423)
Q Consensus 355 ~~~-~-~p----------------~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~---~~~---------~---~~~~~ 401 (423)
.+. + +| +.|..+.+++. +.++..+.+.+.++.... |+. . ..++.
T Consensus 266 ~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~---~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~l 342 (366)
T PRK07582 266 AVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA---DAAAAERFVAASRLVVAATSFGGVHTSADRRARWGDAVPEGF 342 (366)
T ss_pred CccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC---CHHHHHHHHHhCCcceecccCCCccchhhhHHHcCCCCCCCe
Confidence 543 2 22 14567778885 455666666666665531 110 0 12468
Q ss_pred EEEEecChh---hHHHHHHHHhh
Q 014492 402 VRVSVGKPE---HTDALMECLMH 421 (423)
Q Consensus 402 iRis~~~~~---~~~~l~~al~~ 421 (423)
||+|++.++ ..++|.+||++
T Consensus 343 iR~svGlE~~~dli~dl~~al~~ 365 (366)
T PRK07582 343 VRLSCGIEDTDDLVADLERALDA 365 (366)
T ss_pred EEEEeccCCHHHHHHHHHHHHhh
Confidence 999998654 33444555543
No 186
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.93 E-value=6.8e-24 Score=207.82 Aligned_cols=217 Identities=15% Similarity=0.146 Sum_probs=168.5
Q ss_pred CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCch----hhHHHHHHCCCeEEEecC
Q 014492 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT----MYEFDAAVNGAAVVKVPR 199 (423)
Q Consensus 124 ~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~----~~~~~~~~~g~~~~~v~~ 199 (423)
.+|+++...+|++++|+++|.+ ..++++++++++..++.+++++||+|+++.|.|. .+...+...|++++.++.
T Consensus 54 ~r~~~p~~~~le~~lA~l~g~~--~av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~ 131 (391)
T TIGR01328 54 SRLGNPTVSNLEGRIAFLEGTE--AAVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFGIQVDFINM 131 (391)
T ss_pred eCCCCchHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECC
Confidence 4578888899999999999964 3566777778999999989999999999999885 334445668999999885
Q ss_pred CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEE
Q 014492 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (423)
Q Consensus 200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i 278 (423)
+ |++++++.+. +++++|++++|+||+|.+.+.+++.++++. |+++|+|++|....... .. .....+++
T Consensus 132 ~-----d~e~l~~~i~-~~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~~~~~~-~~----~~g~Divv 200 (391)
T TIGR01328 132 A-----IPEEVKAHIK-DNTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFATPMLTN-PV----ALGVDVVV 200 (391)
T ss_pred C-----CHHHHHHhhc-cCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCchhccCC-ch----hcCCCEEE
Confidence 3 7899999986 689999999999999999999999999987 99999999998544321 11 12344889
Q ss_pred ccChhhhcccCcc-ccccccCHHHHHHHHHhcC--C--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccC
Q 014492 279 RTFSKRAGLAGLR-VGYGAFPLSIIEYLWRAKQ--P--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDV 353 (423)
Q Consensus 279 ~S~SK~~g~~G~R-~G~i~~~~~~~~~l~~~~~--~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 353 (423)
.|+||.+|.+|.+ .|+++++++++++++.... . ..+++.....+...|+ .+..+.++.+++.+++.+.|++.
T Consensus 201 ~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~~~g~~l~~~~a~l~l~~L~---tl~~r~~~~~~na~~la~~L~~~ 277 (391)
T TIGR01328 201 HSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKDMTGSVISPFDAWLILRGLK---TLNIRMKRHSENAMKVAEYLKSH 277 (391)
T ss_pred ccccccccCCCCceEEEEEcCHHHHHHHHHHHHHhCCCCCCCcHHHHHHHhCcC---cHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999988877 5788888998888775321 1 2455555554444443 34556777788888999999887
Q ss_pred CCC
Q 014492 354 PFL 356 (423)
Q Consensus 354 ~~~ 356 (423)
+.+
T Consensus 278 p~v 280 (391)
T TIGR01328 278 PAV 280 (391)
T ss_pred CCc
Confidence 654
No 187
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.93 E-value=1e-23 Score=205.79 Aligned_cols=280 Identities=19% Similarity=0.207 Sum_probs=203.9
Q ss_pred CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhH----HHHHHCCCeEEEecCC
Q 014492 125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPRK 200 (423)
Q Consensus 125 ~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~~ 200 (423)
+|+++...+|++.+++++|. +..++++++++++..++.+++++||+|+++.+.|.... ..++..|+++..++.+
T Consensus 36 r~~~p~~~~le~~la~l~g~--~~a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~ 113 (369)
T cd00614 36 RIGNPTVDALEKKLAALEGG--EAALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFVDPD 113 (369)
T ss_pred CCCChhHHHHHHHHHHHHCC--CCEEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEeCCC
Confidence 45677788999999999985 45667777789999999999999999999999997544 3345689999988743
Q ss_pred CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEc
Q 014492 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR 279 (423)
Q Consensus 201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~ 279 (423)
|++++++.++ +++++|++++|+||+|.+.+.+++.++++. |+++|+|++|...... ... ..+.++++.
T Consensus 114 -----d~~~l~~~i~-~~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~~~~~-~~~----~~g~Divv~ 182 (369)
T cd00614 114 -----DPEALEAAIK-PETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYLQ-RPL----ELGADIVVH 182 (369)
T ss_pred -----CHHHHHHhcC-CCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcchhcC-Chh----hhCCcEEEe
Confidence 5899999996 589999999999999999999999999987 9999999999854431 111 234568999
Q ss_pred cChhhhcccC-ccccccccCH-HHHHHHHHhcC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCC
Q 014492 280 TFSKRAGLAG-LRVGYGAFPL-SIIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPF 355 (423)
Q Consensus 280 S~SK~~g~~G-~R~G~i~~~~-~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 355 (423)
|++|.++.+| .+.|++++++ ++++++..... .+.+++..+.++...++. +..+.++..++.+++.+.|++.+.
T Consensus 183 S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~t---l~~r~~~~~~na~~la~~L~~~~~ 259 (369)
T cd00614 183 SATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLALGTILSPFDAWLLLRGLKT---LPLRMERHSENALKVAEFLEKHPK 259 (369)
T ss_pred ccceeccCCCCceEEEEEeCcHHHHHHHHHHHHhhCCCCCHHHHHHHHcCCCC---HHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999987665 7889999977 88888876654 345677776666566543 455677778899999999998775
Q ss_pred Ce-e-cC----------------CCceEEEEEeCC-CCCHHHHHHHHHhCCcEEEeCC------------C---C-----
Q 014492 356 LN-P-YP----------------SYSNFILCEVTS-GMDAKKLKDDLAKMGVMIRHYN------------N---K----- 396 (423)
Q Consensus 356 ~~-~-~p----------------~~~~~~~~~~~~-~~~~~~l~~~L~~~gI~v~~~~------------~---~----- 396 (423)
+. + +| +.|..+.+.+.+ ......|.+.|.--++.+.-|+ + .
T Consensus 260 v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~ 339 (369)
T cd00614 260 VERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKGGLEAAKKFLNALKLFSLAVSLGGVESLVEHPASMTHSQLPPEERA 339 (369)
T ss_pred ccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCCCHHHHHHHHHcCCcceEcccCCCCceeeeCCcccccccCCHHHHH
Confidence 42 2 33 346778888852 1223344444421111111110 0 0
Q ss_pred --C-CCCeEEEEecChhhHHHHHHHHhh
Q 014492 397 --E-LKGYVRVSVGKPEHTDALMECLMH 421 (423)
Q Consensus 397 --~-~~~~iRis~~~~~~~~~l~~al~~ 421 (423)
+ .++.||||++.++ .++|.+.|++
T Consensus 340 ~~g~~~~liR~svGlE~-~~dl~~dl~~ 366 (369)
T cd00614 340 AAGITPGLVRLSVGIED-VEDLIADLEQ 366 (369)
T ss_pred hcCCCCCeEEEEeCcCC-HHHHHHHHHH
Confidence 1 1468999999865 5777766654
No 188
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.93 E-value=1.1e-23 Score=206.75 Aligned_cols=218 Identities=17% Similarity=0.170 Sum_probs=170.9
Q ss_pred CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchh----hHHHHHHCCCeEEEecC
Q 014492 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPR 199 (423)
Q Consensus 124 ~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~ 199 (423)
.+|+++...+|++.++++.|. ++++++++| ++++.+++.+++++||+|+++.|+|.. +...++..|.+++.++.
T Consensus 55 ~R~~~p~~~~Le~~lA~l~g~-~~~v~~~sG-~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~ 132 (405)
T PRK08776 55 TRSGNPTRDLLGEALAELEGG-AGGVITATG-MGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADL 132 (405)
T ss_pred cCCCChHHHHHHHHHHHHhCC-CceEEEcCH-HHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECC
Confidence 456777788999999999996 456655555 799999999999999999999999975 44555667889888874
Q ss_pred CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEE
Q 014492 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (423)
Q Consensus 200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i 278 (423)
.|++++++.++ .++|+|++++|+||||.+.+.+++.++++. |+++|+|++|...... .+. ..+..+++
T Consensus 133 -----~d~~~l~~~i~-~~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~~~-~pl----~~gaDivv 201 (405)
T PRK08776 133 -----TDPRSLADALA-QSPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPALQ-KPL----EFGADLVL 201 (405)
T ss_pred -----CCHHHHHHhcC-cCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCcccccC-Ccc----cccCCEEE
Confidence 37899999986 689999999999999999999999999987 9999999999753221 111 12334899
Q ss_pred ccChhhhccc-Ccccccccc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC
Q 014492 279 RTFSKRAGLA-GLRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP 354 (423)
Q Consensus 279 ~S~SK~~g~~-G~R~G~i~~-~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 354 (423)
.|.+|.++.+ ++..|+++. ++++.+++...... +.++++.+.++... .+|++.+.++..++...+.+.|++.+
T Consensus 202 ~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~~~g~~~s~~~a~l~~~g---l~tl~~r~~~~~~na~~la~~L~~~p 278 (405)
T PRK08776 202 HSTTKYINGHSDVVGGAVVARDAELHQQLVWWANALGLTGSPFDAFLTLRG---LRTLDARLRVHQENADAIAALLDGHA 278 (405)
T ss_pred ecCceeecCCCCceEEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhh---hCcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999998755 467888877 56777777654433 45677766655544 46788889999999999999999876
Q ss_pred CCe
Q 014492 355 FLN 357 (423)
Q Consensus 355 ~~~ 357 (423)
.+.
T Consensus 279 ~v~ 281 (405)
T PRK08776 279 AVN 281 (405)
T ss_pred Cee
Confidence 553
No 189
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.93 E-value=3.9e-23 Score=202.32 Aligned_cols=312 Identities=17% Similarity=0.125 Sum_probs=216.9
Q ss_pred CCCCeeEcCCC-CCCCCCCHHHHHHHhcC--CCCCC-------CCCc-chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492 93 KPEDIVKIDAN-ENPYGPPPEVREALGQL--KFPYI-------YPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (423)
Q Consensus 93 ~~~~~i~l~~~-~~~~~~~~~v~~al~~~--~~~~~-------Y~~~-g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~ 161 (423)
+.+++++|+.| +-.+..+|+++++..+. .++.+ ++.. ...+|+++||+++|. ++.+++.+|.. +...
T Consensus 100 ~~r~~l~FsSndYLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g~-e~all~sSGy~-AN~~ 177 (476)
T PLN02955 100 RFKKLLLFSGNDYLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKKK-EDCLVCPTGFA-ANMA 177 (476)
T ss_pred CCceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHCC-CcEEEECChHH-HHHH
Confidence 34678999876 45677889888776552 22211 1111 236799999999994 35566666665 4445
Q ss_pred HHHHh--------------cCCCCeEEEcCCCchhhHHHHHHC----CCeEEEecCCCCCCCCHHHHHHHhhc--CCceE
Q 014492 162 IMRCV--------------LDPGDKIVDCPPTFTMYEFDAAVN----GAAVVKVPRKSDFSLNVELIADAVER--EKPKC 221 (423)
Q Consensus 162 ~~~~l--------------~~~gd~Vl~~~p~y~~~~~~~~~~----g~~~~~v~~~~~~~~d~~~l~~~i~~--~~~~~ 221 (423)
++.++ .+++|.|++..-.|......++.. +++++.++ ..|++.|++.++. .+.++
T Consensus 178 ~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~-----HND~~~Le~~L~~~~~~~~~ 252 (476)
T PLN02955 178 AMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYR-----HCDMYHLNSLLSSCKMKRKV 252 (476)
T ss_pred HHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeC-----CCCHHHHHHHHHhCCCCceE
Confidence 55555 245678888888999888888876 57777776 4478888888753 23456
Q ss_pred EEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhh---hhc-cCCcEEEEccChhhhcccCccccccc
Q 014492 222 IFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRME---WVK-KHDNLIVLRTFSKRAGLAGLRVGYGA 296 (423)
Q Consensus 222 i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~---~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~ 296 (423)
|++....+++|.+.+.+++.+|++. |+++|+||+|+.+..+..... ..+ ..+.+++++||||++|..| ||++
T Consensus 253 Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G~~G---Gfi~ 329 (476)
T PLN02955 253 VVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAAGCHG---GFIA 329 (476)
T ss_pred EEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCccchhccC---ceee
Confidence 6666889999999999999999987 999999999998775442222 221 2467899999999998777 9999
Q ss_pred cCHHHHHHHHHhcCCC----CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCC
Q 014492 297 FPLSIIEYLWRAKQPY----NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS 372 (423)
Q Consensus 297 ~~~~~~~~l~~~~~~~----~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~ 372 (423)
+++++++.+......+ ..++....++.++++....-...+++++++.+++.+.+ ++ . ..+.++.+.+.+
T Consensus 330 gs~~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~~~~~r~~L~~n~~~fr~~~---G~-~---~~sPI~pI~ig~ 402 (476)
T PLN02955 330 CSKKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKEKWRRKAIWERVKEFKALS---GV-D---ISSPIISLVVGN 402 (476)
T ss_pred cHHHHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhc---CC-C---CCCCEEEEEeCC
Confidence 9999999888766653 23444455555555432112346677888888887742 32 2 136677777765
Q ss_pred CCCHHHHHHHHHhCCcEEEeCCC---CCCCCeEEEEecC---hhhHHHHHHHHhh
Q 014492 373 GMDAKKLKDDLAKMGVMIRHYNN---KELKGYVRVSVGK---PEHTDALMECLMH 421 (423)
Q Consensus 373 ~~~~~~l~~~L~~~gI~v~~~~~---~~~~~~iRis~~~---~~~~~~l~~al~~ 421 (423)
...+.++.++|+++||.+.+..+ +.+...+||+++. .++++++.++|..
T Consensus 403 ~~~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~lv~~L~~ 457 (476)
T PLN02955 403 QEKALKASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKLITALSS 457 (476)
T ss_pred HHHHHHHHHHHHHCCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHHHHHHHH
Confidence 55677889999999999987665 4556689999975 4444555555443
No 190
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.93 E-value=3.1e-23 Score=204.01 Aligned_cols=217 Identities=16% Similarity=0.175 Sum_probs=167.6
Q ss_pred CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchh----hHHHHHHCCCeEEEecC
Q 014492 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPR 199 (423)
Q Consensus 124 ~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~ 199 (423)
.+|+++...+|++++++++|.+. . +++++++.++.+++..++++||+|+++.|.|.. +...++..|++++.++.
T Consensus 60 ~r~~~p~~~~le~~lA~l~g~~~-~-i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 137 (403)
T PRK07503 60 SRISNPTLALLEQRMASLEGGEA-A-VALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDL 137 (403)
T ss_pred eCCCCchHHHHHHHHHHHhCCCc-E-EEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCC
Confidence 45677888999999999999743 4 555566779999998899999999999998863 33445668999999875
Q ss_pred CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEE
Q 014492 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (423)
Q Consensus 200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i 278 (423)
+ |++++++.++ +++|+|++++|+||||.+.+.++|.++|+. |+++|+|++|...... .... .+..+++
T Consensus 138 ~-----d~~~l~~~i~-~~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~~~-~~l~----~g~Di~v 206 (403)
T PRK07503 138 T-----DPAALKAAIS-DKTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYLQ-RPLE----LGADLVV 206 (403)
T ss_pred C-----CHHHHHHhcC-ccCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccC-Cchh----hCCCEEE
Confidence 2 7899999997 589999999999999999999999999987 9999999999855332 1221 2345899
Q ss_pred ccChhhhcccC-ccccccccCHHHHHHHHHh--cC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccC
Q 014492 279 RTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA--KQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDV 353 (423)
Q Consensus 279 ~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~~--~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 353 (423)
.|+||.++.+| .|.|+++.+++++++++.. .. ...++++.+..+...| +.+..+.++..++..++.+.|++.
T Consensus 207 ~S~tK~l~g~gd~~gG~v~~~~~l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L---~tl~~r~~~~~~na~~~a~~L~~~ 283 (403)
T PRK07503 207 HSATKYLGGHGDITAGLVVGGKALADRIRLEGLKDMTGAVMSPFDAFLLMRGL---KTLALRMDRHCASAQAVAEWLARH 283 (403)
T ss_pred ccccccccCCCceeEEEEEcCHHHHHHHHhhhHHhCcCCCCCHHHHHHHHcCc---chHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999998765 7889999889888887632 22 2456666665554444 445555566668888888888877
Q ss_pred CCC
Q 014492 354 PFL 356 (423)
Q Consensus 354 ~~~ 356 (423)
+.+
T Consensus 284 p~v 286 (403)
T PRK07503 284 PAV 286 (403)
T ss_pred CCc
Confidence 644
No 191
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.93 E-value=4e-23 Score=191.09 Aligned_cols=295 Identities=17% Similarity=0.233 Sum_probs=192.7
Q ss_pred CCC-CC-cchHHHHHHHHHHhCCCCCcEEEeCCHHH-HHHHHH-HHh----cC---C-----CCeEEEcCCCchhhHHHH
Q 014492 124 YIY-PD-PESRRLRAALAKDSGLESDHILVGCGADE-LIDLIM-RCV----LD---P-----GDKIVDCPPTFTMYEFDA 187 (423)
Q Consensus 124 ~~Y-~~-~g~~~lr~~ia~~~g~~~~~i~~t~G~~~-al~~~~-~~l----~~---~-----gd~Vl~~~p~y~~~~~~~ 187 (423)
..| +. .|.+++|+.+++.+|+++++|++..+++- .+.-++ .++ .+ | .-+.+++.|+|..+...+
T Consensus 62 RNY~G~l~Gipe~r~l~a~llgv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~ 141 (425)
T PF12897_consen 62 RNYPGGLDGIPEARELFAELLGVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAIT 141 (425)
T ss_dssp TSS-S-SS--HHHHHHHHHHHTS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHH
T ss_pred cCCCCccCChHHHHHHHHHHhCCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHH
Confidence 557 44 37899999999999999999988665543 333222 222 11 1 236899999999999999
Q ss_pred HHCCCeEEEecCCCCCCCCHHHHHHHhh-cCCceEEEEc-CCCCCcCcCCCHHHHHHHHcC-----CCEEEEccCCcccc
Q 014492 188 AVNGAAVVKVPRKSDFSLNVELIADAVE-REKPKCIFLT-SPNNPDGSIINDEDLLKILEM-----PILVVLDEAYTEFS 260 (423)
Q Consensus 188 ~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~~i~l~-~p~NPtG~~~~~~~l~~i~~~-----~~~li~Deay~~~~ 260 (423)
+.+|++.+.||+.++ ++|+|.+++.+. .+.+|.|++. --+||||.+|+.+..++++.. +..|+-|.+|.-..
T Consensus 142 E~~Giemi~VpM~~d-GPDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHh 220 (425)
T PF12897_consen 142 EHFGIEMIPVPMTED-GPDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHH 220 (425)
T ss_dssp HHCT-EEEEEEEETT-EE-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-B
T ss_pred HhhCcEEEecCCCCC-CCCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEee
Confidence 999999999998655 899999999984 4678999965 448999999999999999986 89999999997433
Q ss_pred C--CCc------hhh---hhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhC
Q 014492 261 G--LES------RME---WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQ 327 (423)
Q Consensus 261 ~--~~~------~~~---~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~ 327 (423)
. +.. .+. ..+..++++.+.|.||.- .||-+++++.++++.++.+.+... ..+..-+.|..-...+.
T Consensus 221 L~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKIT-f~GaGva~~aaS~~Nl~~~~~~~~~~tIgpdKvNQLRHvrff~ 299 (425)
T PF12897_consen 221 LYDEEPRDALLNILDACAKAGNPDRVYVFASTSKIT-FPGAGVAFFAASEANLAWIKKHLSVQTIGPDKVNQLRHVRFFK 299 (425)
T ss_dssp SSSSSS------HHHHHHHTT-TTSEEEEEESTTTS--TTSS-EEEEE-HHHHHHHHHHHHHH-S---HHHHHHHHHHHH
T ss_pred ccccccchhhhHHHHHHHHcCCCCeEEEEecccccc-cCCcceeeeecCHHHHHHHHHHhcCceeCccHHHHHHHHHHhc
Confidence 2 211 111 123478999999999964 699999999999999888876643 35677788988888898
Q ss_pred ChH-----HHHHHHHHHHHHHHHHHHHHcc-CC---CCe--ecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC-
Q 014492 328 NPI-----YLEKVKEALIKERERLFKLLKD-VP---FLN--PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN- 395 (423)
Q Consensus 328 ~~~-----~~~~~~~~~~~~~~~l~~~L~~-~~---~~~--~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~- 395 (423)
+.+ ++++.++.++-..+.+.+.|++ ++ .+. ..|.+|+|+++++.+| .++.+.+.+++.||.+.+.+.
T Consensus 300 d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~G-~AkrvV~lakeAGV~LT~AGAt 378 (425)
T PF12897_consen 300 DAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLDG-TAKRVVELAKEAGVALTPAGAT 378 (425)
T ss_dssp SHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEESTT--HHHHHHHHHHTTEE---TTTT
T ss_pred ChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCCC-hHHHHHHHHHHhCceeCCCCCC
Confidence 844 4556666666677766666643 33 222 3589999999999865 688999999999999998443
Q ss_pred -----CCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 396 -----KELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 396 -----~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.+.+..|||+.+.+. .++|..|++.+
T Consensus 379 fPyg~DP~D~nIRiAPS~P~-leel~~Am~~~ 409 (425)
T PF12897_consen 379 FPYGKDPRDSNIRIAPSYPS-LEELETAMDVF 409 (425)
T ss_dssp SGGG--TTS-EEEE--SSS--HHHHHHHHHHH
T ss_pred CCCCCCCCCCcEEecCCCCC-HHHHHHHHHHH
Confidence 234679999999876 58888888754
No 192
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.92 E-value=2e-23 Score=205.03 Aligned_cols=280 Identities=18% Similarity=0.172 Sum_probs=200.7
Q ss_pred CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCc----hhhHHHHHHCCCeEEEecC
Q 014492 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF----TMYEFDAAVNGAAVVKVPR 199 (423)
Q Consensus 124 ~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y----~~~~~~~~~~g~~~~~v~~ 199 (423)
.+|+++...+|++.+|++.|.+ +.+++++++.++..++.+++++||+|+++...| ..+...++..|++++.++.
T Consensus 65 ~r~~~p~~~~le~~lA~l~g~~--~al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~ 142 (403)
T PRK07810 65 SRYGNPTVSMFEERLRLIEGAE--ACFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDG 142 (403)
T ss_pred eCCCCchHHHHHHHHHHHhCCC--cEEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECC
Confidence 4678888899999999999953 566667777888888888999999999887555 4555667778999999973
Q ss_pred CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEE
Q 014492 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (423)
Q Consensus 200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i 278 (423)
.|+++++++++ +++++|++++|+||||.+.+.+++.++|+. |+++|+|++|........ . ..+..+++
T Consensus 143 -----~d~~~l~~ai~-~~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~~-~----~~gaDivv 211 (403)
T PRK07810 143 -----EDLSQWEEALS-VPTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFATPLLQRG-L----PLGADVVV 211 (403)
T ss_pred -----CCHHHHHHhcC-cCceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCccccCCh-h----hcCCcEEE
Confidence 38999999997 689999999999999999999999999997 999999999985543221 1 22446899
Q ss_pred ccChhhhcccCccc-cccccCHHHHH-HHHHhcC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC
Q 014492 279 RTFSKRAGLAGLRV-GYGAFPLSIIE-YLWRAKQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP 354 (423)
Q Consensus 279 ~S~SK~~g~~G~R~-G~i~~~~~~~~-~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 354 (423)
.|++|.++..|.++ |+++++++.+. .++.... ...+++..+..+...|+ .+..+.++..++..++.+.|++.+
T Consensus 212 ~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~~~~g~~~s~~~a~l~l~~L~---tl~~R~~~~~~~a~~~a~~L~~~p 288 (403)
T PRK07810 212 YSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPALSAFNAWVLLKGLE---TLALRVRHSNASALRIAEFLEGHP 288 (403)
T ss_pred ccCCceecCCcCceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHhccC---cHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999998788887 88888877654 3443322 23567777776665554 466777777888888889998876
Q ss_pred CCe-e-cC----------------CCceEEEEEeCCCC--C---HHHHHHHHHhCCcEE----------EeCCC------
Q 014492 355 FLN-P-YP----------------SYSNFILCEVTSGM--D---AKKLKDDLAKMGVMI----------RHYNN------ 395 (423)
Q Consensus 355 ~~~-~-~p----------------~~~~~~~~~~~~~~--~---~~~l~~~L~~~gI~v----------~~~~~------ 395 (423)
.+. + +| ..|..+.+++..+. + ..+|++.|.--++.+ .|...
T Consensus 289 ~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~ 368 (403)
T PRK07810 289 AVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELDAPEDAAKKRAFEVLDKLRVIDISNNLGDAKSLITHPATTTHRAMG 368 (403)
T ss_pred CccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCCCcCHHHHHHHHHhCCceEEeccCCCCcceeeCCCccccccCC
Confidence 543 2 23 34667778886321 1 234555443111111 12110
Q ss_pred -------CCCCCeEEEEecChhhHHHHHHHHh
Q 014492 396 -------KELKGYVRVSVGKPEHTDALMECLM 420 (423)
Q Consensus 396 -------~~~~~~iRis~~~~~~~~~l~~al~ 420 (423)
.-.++.+|||++.++ .++|.+-|+
T Consensus 369 ~~~~~~~gi~~~lvR~svGlE~-~~dli~dl~ 399 (403)
T PRK07810 369 PEGRAAIGLGDGVVRLSVGLED-TDDLIADLD 399 (403)
T ss_pred HHHHHhcCCCCCeEEEEeccCC-HHHHHHHHH
Confidence 012468999999875 466666554
No 193
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.92 E-value=4.2e-23 Score=201.07 Aligned_cols=217 Identities=16% Similarity=0.123 Sum_probs=170.0
Q ss_pred CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchh-hHHH---HHHCCCeEEEecC
Q 014492 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM-YEFD---AAVNGAAVVKVPR 199 (423)
Q Consensus 124 ~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~-~~~~---~~~~g~~~~~v~~ 199 (423)
.+|+++....|++++|++.| .+++++++|+++++..++.+++++||+|+++.|+|.. +... ....|++++.++
T Consensus 48 ~R~~npt~~~Le~~lA~leg--~e~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd- 124 (388)
T PRK08861 48 TRSGNPNRGLLEQTLSELES--GKGAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVD- 124 (388)
T ss_pred cCCCCchHHHHHHHHHHHhC--CCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEEC-
Confidence 56788889999999999999 4799999999999999999999999999999999984 3322 334578888886
Q ss_pred CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEE
Q 014492 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (423)
Q Consensus 200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i 278 (423)
..|++++++++. +++++|++++|+||||.+++.+++.++++. |+++|+|++|...... .+. ..+..+++
T Consensus 125 ----~~d~e~l~~~i~-~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~~~~~-~pl----~~GaDivv 194 (388)
T PRK08861 125 ----QSDAAALDAALA-KKPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLTPVLQ-KPL----ELGADFVI 194 (388)
T ss_pred ----CCCHHHHHHhcC-cCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccccccC-CCc----ccCCCEEE
Confidence 358999999987 689999999999999999999999999987 9999999999854432 111 22345899
Q ss_pred ccChhhhccc-CccccccccC-HHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC
Q 014492 279 RTFSKRAGLA-GLRVGYGAFP-LSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP 354 (423)
Q Consensus 279 ~S~SK~~g~~-G~R~G~i~~~-~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 354 (423)
.|++|.++.+ +...|+++++ +++.++++..+.. ..+++.....+...| +.+..+.++..++...+.+.|++.+
T Consensus 195 ~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl---~Tl~lR~~~~~~~a~~~a~~L~~~p 271 (388)
T PRK08861 195 HSTTKYINGHSDVIGGVLITKTKEHAEELAWWGNCIGATGTPFDSYMTLRGI---RTLGARMRVHEESAQQILAYLQTQS 271 (388)
T ss_pred eecceeccCCCcceeEEEEecHHHHHHHHHHHHhccCCCCChHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999987643 4678988874 5666666654443 345666655444444 3466677777888999999999876
Q ss_pred CC
Q 014492 355 FL 356 (423)
Q Consensus 355 ~~ 356 (423)
.+
T Consensus 272 ~v 273 (388)
T PRK08861 272 LV 273 (388)
T ss_pred Ce
Confidence 54
No 194
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.92 E-value=4.6e-23 Score=203.75 Aligned_cols=313 Identities=16% Similarity=0.203 Sum_probs=211.7
Q ss_pred CCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-CCCC----CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492 92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (423)
Q Consensus 92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~----~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~ 163 (423)
.+++.++||..+ ...+| .+|++.+++.+ +... ..+..+...++.+.+++..+ .+.+++++++++++..++
T Consensus 37 ~dG~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~~~~sGseA~e~a~ 114 (403)
T PRK05093 37 QQGKEYIDFAGGIAVTALGHCHPALVKALKEQGEKLWHISNVFTNEPALRLAKKLIDATF--AERVFFANSGAEANEAAF 114 (403)
T ss_pred CCCCEEEEcCcCHHhccCCCCCHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHHhhCC--CCEEEEeCchHHHHHHHH
Confidence 456789999776 23333 56888888876 2211 11222234578888888765 368999999999999999
Q ss_pred HHhc--------CCCCeEEEcCCCchhhHHHH-HHCC------------CeEEEecCCCCCCCCHHHHHHHhhcCCceEE
Q 014492 164 RCVL--------DPGDKIVDCPPTFTMYEFDA-AVNG------------AAVVKVPRKSDFSLNVELIADAVEREKPKCI 222 (423)
Q Consensus 164 ~~l~--------~~gd~Vl~~~p~y~~~~~~~-~~~g------------~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i 222 (423)
+... ...+.|+..+-+|++....+ ...| .+++.+| ..|++.+++.+. +++++|
T Consensus 115 klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~l~-~~~aai 188 (403)
T PRK05093 115 KLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVP-----FNDLAAVKAVID-DHTCAV 188 (403)
T ss_pred HHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeC-----CCCHHHHHHHhc-CCeEEE
Confidence 8441 12356777777776543222 2111 1222222 127899999886 578888
Q ss_pred EEcCCCCCcCcCC--CHHHHHHH---HcC-CCEEEEccCCccccCCCchhh--hhccCCcEEEEccChhhhcccCccccc
Q 014492 223 FLTSPNNPDGSII--NDEDLLKI---LEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLRVGY 294 (423)
Q Consensus 223 ~l~~p~NPtG~~~--~~~~l~~i---~~~-~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~g~~G~R~G~ 294 (423)
+++ |.||+|-++ +.+.+++| |+. |+++|+||+|.++.+.+.... ..+..+. +.||||+++ +|+|+||
T Consensus 189 iie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pd---i~s~sK~l~-~G~rig~ 263 (403)
T PRK05093 189 VVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYMHYGVTPD---ILTSAKALG-GGFPIGA 263 (403)
T ss_pred EEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCC---EEEeccccc-CCcceEE
Confidence 887 777777665 65555554 544 999999999998765443221 1111122 568999999 9999999
Q ss_pred cccCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC----CCeecCCCceEEEE
Q 014492 295 GAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP----FLNPYPSYSNFILC 368 (423)
Q Consensus 295 i~~~~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~----~~~~~p~~~~~~~~ 368 (423)
+++++++++.+..... .++.+++.|.++.++|+... ..+..++++++++++.+.|+++. .+...+..|.++|+
T Consensus 264 vv~~~~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~ 342 (403)
T PRK05093 264 MLTTAEIASHFKVGTHGSTYGGNPLACAVAEAVFDIIN-TPEVLEGVKARRQRFVDGLQKINQKYGVFSEIRGMGLLIGA 342 (403)
T ss_pred EEEcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhhCCCeEeEeeCceEEEE
Confidence 9999999888865322 36678999998888775321 23456778888889998887752 22234567899999
Q ss_pred EeCCCC--CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 369 EVTSGM--DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 369 ~~~~~~--~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.++... ++.++++.|.++||.+.+.+ .+++||+++...+.+++.+++++|
T Consensus 343 ~l~~~~~~~~~~~~~~l~~~Gv~v~~~g----~~~lRl~~~~~~~~~~i~~~~~~l 394 (403)
T PRK05093 343 ELKPQYKGRARDFLNAAAEEGVMVLVAG----PDVLRFAPSLVIEEADIDEGLARF 394 (403)
T ss_pred EecCcchhHHHHHHHHHHHCCeEEecCC----CCEEEEeCCCCCCHHHHHHHHHHH
Confidence 986433 56789999999999998753 479999876543446677776665
No 195
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.92 E-value=8e-23 Score=202.15 Aligned_cols=315 Identities=13% Similarity=0.116 Sum_probs=211.9
Q ss_pred CCCCCeeEcCCCCCCCC---CCHHHHHHHhc-CC---CCC-CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492 92 RKPEDIVKIDANENPYG---PPPEVREALGQ-LK---FPY-IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (423)
Q Consensus 92 ~~~~~~i~l~~~~~~~~---~~~~v~~al~~-~~---~~~-~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~ 163 (423)
..++.++|+..+..... .+|++.+++.+ +. ... .+..+...+|.+.++++.+. +.+++++++++|+..++
T Consensus 38 ~~g~~~lD~~~~~~~~~~Gh~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~~~~SGs~A~e~al 115 (401)
T PRK00854 38 TDGNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTSRAFRNDQLAPLYEELAALTGS--HKVLPMNSGAEAVETAI 115 (401)
T ss_pred CCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhCCC--CEEEEeCCcHHHHHHHH
Confidence 35677899877643332 26888888765 22 111 12334467899999999874 58999999999999999
Q ss_pred HHhcC---------CC-CeEEEcCCCchhhHHHHHHCCC-------------eEEEecCCCCCCCCHHHHHHHhhcCCce
Q 014492 164 RCVLD---------PG-DKIVDCPPTFTMYEFDAAVNGA-------------AVVKVPRKSDFSLNVELIADAVEREKPK 220 (423)
Q Consensus 164 ~~l~~---------~g-d~Vl~~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~d~~~l~~~i~~~~~~ 220 (423)
+.+.. +| ++|++..-+|+.....+...+. .+..+| ..|++++++.+. ++++
T Consensus 116 ~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~le~~i~-~~~~ 189 (401)
T PRK00854 116 KAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVP-----FGDAEALEAAIT-PNTV 189 (401)
T ss_pred HHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeC-----CCCHHHHHHHhC-CCeE
Confidence 87642 23 6788887777654333222221 222232 247899999996 6899
Q ss_pred EEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCchhh--hhccCCcEEEEccChhhhcccCcccc
Q 014492 221 CIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLRVG 293 (423)
Q Consensus 221 ~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~g~~G~R~G 293 (423)
+|++++|+||+|.+++ .+++.++|+. |+++|+||+|..+...+.... ..+....+++ ++|.++...+|+|
T Consensus 190 aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~~~~~~g~~~D~~~---~~K~l~gg~~~ig 266 (401)
T PRK00854 190 AFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGIEADVTL---IGKALSGGFYPVS 266 (401)
T ss_pred EEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHhHHhhcCCCCCEEE---ecccccCCccCeE
Confidence 9999999999999998 5666667765 999999999987654432211 1111222232 3699874337999
Q ss_pred ccccCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCee--cCCCceEEEEE
Q 014492 294 YGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNP--YPSYSNFILCE 369 (423)
Q Consensus 294 ~i~~~~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~p~~~~~~~~~ 369 (423)
++++++++++.+..... .++.+++.+.++.++|+..+- +...++++++.+++.+.|++++...+ ..+.|.++.+.
T Consensus 267 ~v~~~~~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~~l~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~g~~~~i~ 345 (401)
T PRK00854 267 AVLSNSEVLGVLKPGQHGSTFGGNPLACAVARAALKVLTE-EGMIENAAEMGAYFLEGLRSIRSNIVREVRGRGLMLAVE 345 (401)
T ss_pred EEEEcHHHHhcccCCCCCCCCCcCHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHhhccCceEEEeccceEEEEE
Confidence 99999999887754322 356788999999888864221 23567788888999999987653221 23445555555
Q ss_pred e-CCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 370 V-TSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 370 ~-~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
+ ++..+..++++.|.++||.+.+.. .+++|+++....+.+++.+++++|
T Consensus 346 ~~~~~~~~~~~~~~L~~~GV~v~~~~----~~~lR~~p~~~~t~e~i~~~i~~l 395 (401)
T PRK00854 346 LEPEAGGARQYCEALKERGLLAKDTH----DHTIRLAPPLVITREQVDWALEQI 395 (401)
T ss_pred EecCchhHHHHHHHHHHCCeEEecCC----CCEEEEeCCcccCHHHHHHHHHHH
Confidence 5 333457889999999999997643 479999975333335555555554
No 196
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.92 E-value=9.7e-23 Score=202.79 Aligned_cols=319 Identities=18% Similarity=0.167 Sum_probs=211.5
Q ss_pred CCCCCCeeEcCCCCCC--C-CCCHHHHHHHhc-CCCCCCC--CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHH
Q 014492 91 GRKPEDIVKIDANENP--Y-GPPPEVREALGQ-LKFPYIY--PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (423)
Q Consensus 91 ~~~~~~~i~l~~~~~~--~-~~~~~v~~al~~-~~~~~~Y--~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~ 164 (423)
..+++.++|+..+... + ..+|.+.+++.+ +.....| +..+..+|+++|+++++. .++|++++|+++++..+++
T Consensus 44 d~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~lae~l~~~~~~-~~~v~~~~sGseA~e~Alk 122 (423)
T TIGR00713 44 DVDGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERGTSYGAPTEAEILLAKEIISRVPS-VEMVRFVNSGTEATMSAVR 122 (423)
T ss_pred eCCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCcCCCCCHHHHHHHHHHHHhCCc-ccEEEEeCCHHHHHHHHHH
Confidence 3457889999887533 3 356888888876 3222223 555788999999998864 3689999999999999888
Q ss_pred Hhc--CCCCeEEEcCCCchhhHHHHHH---CCCeEEEecCCCC---------C---CCCHHHHHHHhhc--CCceEEEEc
Q 014492 165 CVL--DPGDKIVDCPPTFTMYEFDAAV---NGAAVVKVPRKSD---------F---SLNVELIADAVER--EKPKCIFLT 225 (423)
Q Consensus 165 ~l~--~~gd~Vl~~~p~y~~~~~~~~~---~g~~~~~v~~~~~---------~---~~d~~~l~~~i~~--~~~~~i~l~ 225 (423)
... ...++|+...++|+.+...+.. .+......+.... . ..|++++++.+.+ .++++|+++
T Consensus 123 ~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aavi~e 202 (423)
T TIGR00713 123 LARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGEEIAGVIVE 202 (423)
T ss_pred HHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCCcEEEEEEe
Confidence 532 2458999999999876543322 1111111110000 0 1278999998863 467888886
Q ss_pred -CCCCCcCcCCCH----HHHHHHHcC-CCEEEEccCCccccCCCch-hhhhccCCcEEEEccChhhhcccCccccccccC
Q 014492 226 -SPNNPDGSIIND----EDLLKILEM-PILVVLDEAYTEFSGLESR-MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP 298 (423)
Q Consensus 226 -~p~NPtG~~~~~----~~l~~i~~~-~~~li~Deay~~~~~~~~~-~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~ 298 (423)
.|+| +|.+.+. +++.++|+. |+++|+||+|..+..+... .......+. +.+|||.++ +|+|+||++++
T Consensus 203 p~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~~~~~~~~~~~pD---i~t~sK~l~-~G~pig~v~~~ 277 (423)
T TIGR00713 203 PVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVALGGAQEYFGVEPD---LTTLGKIIG-GGLPVGAFGGR 277 (423)
T ss_pred CCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCcchhHHHhCCCcc---hhhhhhhhc-CCCceeeeeEH
Confidence 7888 7988883 455566665 9999999999887543211 112222222 347999999 99999999999
Q ss_pred HHHHHHHHHhc-----CCCCCcHHHHHHHHHHhC---ChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEe
Q 014492 299 LSIIEYLWRAK-----QPYNVSVAAEVAACAALQ---NPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEV 370 (423)
Q Consensus 299 ~~~~~~l~~~~-----~~~~~~~~~~~a~~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~ 370 (423)
+++++.+.... ..++.+++++.++.++|+ +.++.+..++..+..++.+.+.+++.+........|.++.+.+
T Consensus 278 ~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~v~~ 357 (423)
T TIGR00713 278 REIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDTGIPHTVNRVGSMFSLFF 357 (423)
T ss_pred HHHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeccEEEEEE
Confidence 99998886321 346789999998888876 3446777777788888888888877765432223444444433
Q ss_pred CC-C---------CC---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014492 371 TS-G---------MD---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH 421 (423)
Q Consensus 371 ~~-~---------~~---~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~ 421 (423)
.. . .+ ...+.+.|.++||.+.+.. .+.+||++... .+++.+++++
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~----~~~~~l~~~~t--~~~i~~~~~~ 415 (423)
T TIGR00713 358 TEEEVTNYADAKKSDTELFAKFFHEMLDKGVFLPPSQ----FEACFLSAAHT--EEDIENTIEA 415 (423)
T ss_pred ecCCCCChhhhhcccHHHHHHHHHHHHHCCeEEecCC----ccceeeECCCC--HHHHHHHHHH
Confidence 21 1 11 2357778889999987643 24689987522 2445554444
No 197
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.92 E-value=7e-23 Score=200.52 Aligned_cols=310 Identities=21% Similarity=0.229 Sum_probs=227.4
Q ss_pred eEcCCCCCCCCCCHHHHHHHhcC-----CCC--CCCC-Cc----chHHHHHHHHHHhCCCC-CcEEEeCCHHHHHHHHHH
Q 014492 98 VKIDANENPYGPPPEVREALGQL-----KFP--YIYP-DP----ESRRLRAALAKDSGLES-DHILVGCGADELIDLIMR 164 (423)
Q Consensus 98 i~l~~~~~~~~~~~~v~~al~~~-----~~~--~~Y~-~~----g~~~lr~~ia~~~g~~~-~~i~~t~G~~~al~~~~~ 164 (423)
|+|+.+... +.|+.+.+++.+. ..+ ..+. .. -..++|+.+++++|.++ ++|++++|++++++.++.
T Consensus 1 iYld~~~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~ 79 (371)
T PF00266_consen 1 IYLDNAGTG-PMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVAS 79 (371)
T ss_dssp EEEBTSSS--B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHH
T ss_pred CEeeCCCcc-CCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhh
Confidence 355554333 4567788888662 111 1111 11 24589999999999988 899999999999999999
Q ss_pred Hh---cCCCCeEEEcCCCchhhH----HHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCH
Q 014492 165 CV---LDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND 237 (423)
Q Consensus 165 ~l---~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~ 237 (423)
.+ +++||+|++.+-.|+... ..++..|+++..++.+.+..+|++++++.+. ++++++++++.+|-||..+|.
T Consensus 80 ~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~~~~~~~~~~~l~-~~~~lv~~~~~~~~tG~~~pi 158 (371)
T PF00266_consen 80 SLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGGSLDLEDLEEALN-PDTRLVSISHVENSTGVRNPI 158 (371)
T ss_dssp HHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTSSCSHHHHHHHHH-TTESEEEEESBETTTTBBSSH
T ss_pred ccccccccccccccccccccccccccccccccchhhhccccccccchhhhhhhhhhhc-cccceEEeecccccccEEeee
Confidence 99 789999999999997444 4455689999999976777899999999997 899999999999999999999
Q ss_pred HHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC-----
Q 014492 238 EDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP----- 311 (423)
Q Consensus 238 ~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~----- 311 (423)
+++.++|+. |+++++|.+++..... ..+...+-++++.|..|.+|.+| +|+++.+++.++++......
T Consensus 159 ~~I~~~~~~~~~~~~vD~~~~~g~~~----id~~~~~~D~~~~s~~Kl~gp~G--~g~l~v~~~~~~~~~p~~~~~~~~~ 232 (371)
T PF00266_consen 159 EEIAKLAHEYGALLVVDAAQSAGCVP----IDLDELGADFLVFSSHKLGGPPG--LGFLYVRPEAIERLRPAKPGGGYLD 232 (371)
T ss_dssp HHHHHHHHHTTSEEEEE-TTTTTTSS------TTTTTESEEEEESTSTTSSST--EEEEEEEHHHHHHHHTSSSSSSTTT
T ss_pred ceehhhhhccCCceeEechhcccccc----ccccccccceeeecccccCCCCc--hhhheehhhhhhccccccccccccc
Confidence 999999987 9999999999844321 11233455589999999444445 79999999988888432211
Q ss_pred ------------------CCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeecC-----CCceEE
Q 014492 312 ------------------YNVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPYP-----SYSNFI 366 (423)
Q Consensus 312 ------------------~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p-----~~~~~~ 366 (423)
.+.+.....++..+++. ...+++..++..++.+++.+.|++++.+.+.. ..+..+
T Consensus 233 ~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~ 312 (371)
T PF00266_consen 233 FPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIV 312 (371)
T ss_dssp HHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEE
T ss_pred cccchhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceE
Confidence 14556666666666654 23467788899999999999999998776522 234556
Q ss_pred EEEeCCCCCHHHHHHHHHhCCcEEEeCCCCC--------CCCeEEEEecChhhHHHHH
Q 014492 367 LCEVTSGMDAKKLKDDLAKMGVMIRHYNNKE--------LKGYVRVSVGKPEHTDALM 416 (423)
Q Consensus 367 ~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~--------~~~~iRis~~~~~~~~~l~ 416 (423)
.+.++ +.+..++.+.|.++||.++.|.... ..++||+|+....+.++++
T Consensus 313 ~~~~~-~~~~~~~~~~L~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~ 369 (371)
T PF00266_consen 313 SFNLP-GSDADDVVKYLEERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVD 369 (371)
T ss_dssp EEEET-TSSHHHHHHHHHHHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHH
T ss_pred EEeec-CCCHHHHHHHHhhcCEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHh
Confidence 66775 7889999999997899999865422 3489999987544444444
No 198
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.92 E-value=1.3e-22 Score=200.60 Aligned_cols=321 Identities=13% Similarity=0.103 Sum_probs=208.0
Q ss_pred CCCCCeeEcCCCCCCCC---CCHHHHHHHhcC-C-CCCC---CCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492 92 RKPEDIVKIDANENPYG---PPPEVREALGQL-K-FPYI---YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (423)
Q Consensus 92 ~~~~~~i~l~~~~~~~~---~~~~v~~al~~~-~-~~~~---Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~ 163 (423)
.+++.++|+..+..... .+|++.+++.+. . ..+. +......++++.++++.+. +.+++++++++++..++
T Consensus 28 ~dg~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~SGs~A~e~al 105 (400)
T PTZ00125 28 VEGKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLTSRAFYNDVLGLAEKYITDLFGY--DKVLPMNSGAEAGETAL 105 (400)
T ss_pred CCCCEEEEcccCHhhccCCcCCHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHhCCCC--CEEEEeCCcHHHHHHHH
Confidence 35677899987744432 478899888763 2 1111 1223456788888888774 57889999999999999
Q ss_pred HHhcC----------CCCeEEEcCCCchhhHHHH-HHCCCeEE---EecCCCC----CCCCHHHHHHHhhcCCceEEEEc
Q 014492 164 RCVLD----------PGDKIVDCPPTFTMYEFDA-AVNGAAVV---KVPRKSD----FSLNVELIADAVEREKPKCIFLT 225 (423)
Q Consensus 164 ~~l~~----------~gd~Vl~~~p~y~~~~~~~-~~~g~~~~---~v~~~~~----~~~d~~~l~~~i~~~~~~~i~l~ 225 (423)
+.... .+++|+..+-.|+...... ...+.... ..+...+ ...|++++++.+...++++|+++
T Consensus 106 ~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~v~~e 185 (400)
T PTZ00125 106 KFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDPNVAAFIVE 185 (400)
T ss_pred HHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCCCeEEEEEc
Confidence 86631 3467888888886543322 22221111 0010000 12389999999864679999999
Q ss_pred CCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCchhhh--hccCCcEEEEccChhhhcccCccccccccC
Q 014492 226 SPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEW--VKKHDNLIVLRTFSKRAGLAGLRVGYGAFP 298 (423)
Q Consensus 226 ~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~--~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~ 298 (423)
+++||||.+++ .+++.++|+. |+++|+||+|..+...+..... ....+.++ ++||.++.+++|+||++++
T Consensus 186 p~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~~pd~~---~~sK~l~~g~~~ig~v~~~ 262 (400)
T PTZ00125 186 PIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVKPDIV---LLGKALSGGLYPISAVLAN 262 (400)
T ss_pred CccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCCCCCEE---EEcccccCCCcCcEEEEEc
Confidence 99999999998 6677777776 9999999999876543322111 11122222 4689998444599999999
Q ss_pred HHHHHHHHHhc--CCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc----CCCCeecCCCceEEEEEeCC
Q 014492 299 LSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKD----VPFLNPYPSYSNFILCEVTS 372 (423)
Q Consensus 299 ~~~~~~l~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~p~~~~~~~~~~~~ 372 (423)
+++++.+.... ..++.+++.+.++.++|+..+. +...++.+++.+++.+.|++ .+.+....+.|.++++.++.
T Consensus 263 ~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~-~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~g~~~~v~~~~ 341 (400)
T PTZ00125 263 DDVMLVIKPGEHGSTYGGNPLACAVAVEALEVLKE-EKLAENAQRLGEVFRDGLKELLKKSPWVKEIRGKGLLNAIVFDH 341 (400)
T ss_pred HHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEecccEEEEEEEcc
Confidence 99998876433 2366788888888777643110 12334444455555555544 34433234567888888863
Q ss_pred --CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 373 --GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 373 --~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
+.+..++.+.|.++||.+.++. .+++||++....+.+++.+++++|
T Consensus 342 ~~~~~~~~~~~~l~~~Gv~v~~~~----~~~lRi~~~~~~~~~~i~~~l~~l 389 (400)
T PTZ00125 342 SDGVNAWDLCLKLKENGLLAKPTH----DNIIRFAPPLVITKEQLDQALEII 389 (400)
T ss_pred CcchHHHHHHHHHHHCCeEEeecC----CCEEEEECCccCCHHHHHHHHHHH
Confidence 3467789999999999998754 579999975322335565555554
No 199
>PRK05968 hypothetical protein; Provisional
Probab=99.92 E-value=6.3e-23 Score=201.02 Aligned_cols=277 Identities=20% Similarity=0.180 Sum_probs=203.1
Q ss_pred CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchh----hHHHHHHCCCeEEEecCC
Q 014492 125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRK 200 (423)
Q Consensus 125 ~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~ 200 (423)
+|+++...+|++++++++|.+ ..++++ +++.++..++.+++++||+|+++.+.|.. +...++..|++++.++.
T Consensus 59 r~~~p~~~~le~~lA~l~g~~-~av~~~-sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~- 135 (389)
T PRK05968 59 RGDNPTVRAFEEMLAKLEGAE-DARGFA-SGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDG- 135 (389)
T ss_pred CCCChhHHHHHHHHHHHhCCC-cEEEEC-CHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCC-
Confidence 456667889999999999974 345554 55579998888899999999999999974 34556678999999873
Q ss_pred CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEc
Q 014492 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR 279 (423)
Q Consensus 201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~ 279 (423)
.|++++++.+ .++|+|++++|.||++.+.+.+++.++++. |+++|+|++|..+.... .. ..+..+++.
T Consensus 136 ----~d~~~l~~~i--~~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~-p~----~~g~Divv~ 204 (389)
T PRK05968 136 ----RDEEAVAKAL--PGAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWASPVFQR-PI----TLGVDLVIH 204 (389)
T ss_pred ----CCHHHHHHhc--ccCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchhccC-ch----hcCCcEEEe
Confidence 2789999988 368999999999999999999999999987 99999999998654322 11 123358889
Q ss_pred cChhhhcccC-ccccccccCHHHHHHHHHhcCC---CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCC
Q 014492 280 TFSKRAGLAG-LRVGYGAFPLSIIEYLWRAKQP---YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPF 355 (423)
Q Consensus 280 S~SK~~g~~G-~R~G~i~~~~~~~~~l~~~~~~---~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 355 (423)
|++|.++.+| .+.|+++.++++++++++...+ ..+++..+..+...|+. +..+.++..++.+++.+.|++++.
T Consensus 205 S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~~~~g~~~~~~~A~~~l~~L~t---l~~r~~~~~~~a~~la~~L~~~p~ 281 (389)
T PRK05968 205 SASKYLGGHSDTVAGVVAGSKEHIARINAEAYPYLGAKLSPFEAWLLLRGLRT---LPLRMKAHEASALEIARRLKAHPV 281 (389)
T ss_pred eccccccCCCCeEEEEEEECHHHHHHHHHHHHHhCCCCCChHHHHHHHcccCc---HHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999988655 5789999999988887754332 35666666666555543 456666667778889999998876
Q ss_pred Ce-e-cC-----------CCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC----------------------C-CC
Q 014492 356 LN-P-YP-----------SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK----------------------E-LK 399 (423)
Q Consensus 356 ~~-~-~p-----------~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~----------------------~-~~ 399 (423)
+. + +| +.+..+.+++.++.+..+|++.|...++.++-|+.. + .+
T Consensus 282 v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~~~~~~f~~~L~~~~~~~s~G~~~slv~p~~~~~~~~~~~~~~~~~gi~~ 361 (389)
T PRK05968 282 VERVCHPALANHPPAGLSGTSGLFSFIFREGIDVRAFADALKLFRLGVSWGGHESLVVPAEVVLQQKAQPNSAARFGVSP 361 (389)
T ss_pred ccEEECCCCCCChHHhCCCCceEEEEEECCHHHHHHHHHhCCccEEecCCCCCCceeeeCcccccccCCHHHHHhcCCCC
Confidence 64 3 34 234577788865556778888887666555433221 1 15
Q ss_pred CeEEEEecChhhHHHHHHHH
Q 014492 400 GYVRVSVGKPEHTDALMECL 419 (423)
Q Consensus 400 ~~iRis~~~~~~~~~l~~al 419 (423)
+.||+|++.++ .++|.+-+
T Consensus 362 ~liR~SvGlE~-~~dl~~dl 380 (389)
T PRK05968 362 RSVRLHVGLEG-TEALWADL 380 (389)
T ss_pred CeEEEEeccCC-HHHHHHHH
Confidence 78999999765 35554433
No 200
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.92 E-value=6.8e-23 Score=200.70 Aligned_cols=280 Identities=18% Similarity=0.143 Sum_probs=194.1
Q ss_pred CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHH-H---HHCCCeEEEecC
Q 014492 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD-A---AVNGAAVVKVPR 199 (423)
Q Consensus 124 ~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~-~---~~~g~~~~~v~~ 199 (423)
.+|+++...+|++++++++|.+. .+++ +++++++..++.+++++||+|+++.|+|...... . +..|+++..++.
T Consensus 56 ~r~~~p~~~~Le~~lA~~~g~~~-~i~~-~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~ 133 (388)
T PRK07811 56 ARTGNPTRTALEEQLAALEGGAY-GRAF-SSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDL 133 (388)
T ss_pred cCCCCccHHHHHHHHHHHhCCCc-eEEe-CCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCC
Confidence 35677888999999999999754 4445 4557999999999999999999999999843322 2 235888887763
Q ss_pred CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEE
Q 014492 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (423)
Q Consensus 200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i 278 (423)
.|++++++.+. +++|+|++++|+||||.+.+.+++.++++. |+++|+|++|....... +.. .+..+++
T Consensus 134 -----~d~e~l~~~i~-~~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~~~-p~~----~gaDivv 202 (388)
T PRK07811 134 -----SDLDAVRAAIT-PRTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYLQQ-PLA----LGADVVV 202 (388)
T ss_pred -----CCHHHHHHhcC-cCCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCccccCC-chh----hCCcEEE
Confidence 48999999997 689999999999999999999999999987 99999999998654321 111 2335999
Q ss_pred ccChhhhcccC-ccccccccC-HHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC
Q 014492 279 RTFSKRAGLAG-LRVGYGAFP-LSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP 354 (423)
Q Consensus 279 ~S~SK~~g~~G-~R~G~i~~~-~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 354 (423)
.|++|.++.+| .+.||++++ +++.+++...+.. ...++..+..+...|+ .+..+.++..++...+.+.|++.+
T Consensus 203 ~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~L~---tl~~R~~~~~~na~~la~~L~~~p 279 (388)
T PRK07811 203 HSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQNGAGAVPGPFDAYLTLRGLK---TLAVRMDRHSENAEAVAEFLAGHP 279 (388)
T ss_pred ecCceeecCCCCcEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccC---cHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999988654 467998874 6666666654433 2345555444444444 355666667788899999998876
Q ss_pred CCe--ecCC----------------CceEEEEEeCCC-CCHHHHHHHHHhCCcEEEeCCC--------------------
Q 014492 355 FLN--PYPS----------------YSNFILCEVTSG-MDAKKLKDDLAKMGVMIRHYNN-------------------- 395 (423)
Q Consensus 355 ~~~--~~p~----------------~~~~~~~~~~~~-~~~~~l~~~L~~~gI~v~~~~~-------------------- 395 (423)
.+. .+|. .|..+.+++.++ .....|.+.|.=-.+.+.-|+.
T Consensus 280 ~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~ 359 (388)
T PRK07811 280 EVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAGGEEAARDFCARTKVFTLAESLGGVESLIEHPSAMTHASTAGSQL 359 (388)
T ss_pred CeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCCCHHHHHHHHHhCCcceeeccCCCCcceEeCCcccCcccCCHhhc
Confidence 543 2332 355677888532 2234455554311112211110
Q ss_pred CCCCCeEEEEecChhhHHHHHHHHh
Q 014492 396 KELKGYVRVSVGKPEHTDALMECLM 420 (423)
Q Consensus 396 ~~~~~~iRis~~~~~~~~~l~~al~ 420 (423)
.-.++.||||++.++ .++|.+-|+
T Consensus 360 gi~~~liR~svGlE~-~~dl~~dl~ 383 (388)
T PRK07811 360 EVPDDLVRLSVGIED-VADLLADLE 383 (388)
T ss_pred CCCCCEEEEEeCCCC-HHHHHHHHH
Confidence 011468999999875 466655544
No 201
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.92 E-value=9.4e-23 Score=199.87 Aligned_cols=278 Identities=15% Similarity=0.210 Sum_probs=194.6
Q ss_pred CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchh-h---HHHHHHCCCeEEEecCCCC
Q 014492 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM-Y---EFDAAVNGAAVVKVPRKSD 202 (423)
Q Consensus 127 ~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~-~---~~~~~~~g~~~~~v~~~~~ 202 (423)
.++...+|++++++++|.+ +.+++++|. .++..++. ++++||+|+++.|.|+. + ...++..|++++.++.+
T Consensus 52 ~~p~~~~le~~lA~l~g~~-~~v~~~sG~-~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-- 126 (390)
T PRK08064 52 GNPTREALEDIIAELEGGT-KGFAFASGM-AAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDMT-- 126 (390)
T ss_pred CChhHHHHHHHHHHHhCCC-CeEEECCHH-HHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECCC--
Confidence 4566789999999999976 567776665 57888886 78999999999999963 2 34456689999999852
Q ss_pred CCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccC
Q 014492 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF 281 (423)
Q Consensus 203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~ 281 (423)
|++++++.++ +++++|++++|+||||.+.+.+++.++++. |+++|+|++|..+.... .. ..+.++++.|+
T Consensus 127 ---d~~~l~~~l~-~~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~-~~----~~g~Divv~S~ 197 (390)
T PRK08064 127 ---NLEEVAQNIK-PNTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLLQK-PL----DLGADVVLHSA 197 (390)
T ss_pred ---CHHHHHHhcC-CCceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCcccccC-ch----hhCCcEEEeec
Confidence 6899999996 689999999999999999999999999997 99999999998654321 11 23456899999
Q ss_pred hhhhcc-cCcccccccc-CHHHHHHHHHhcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCe-e
Q 014492 282 SKRAGL-AGLRVGYGAF-PLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLN-P 358 (423)
Q Consensus 282 SK~~g~-~G~R~G~i~~-~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~ 358 (423)
+|.++. .|...|+++. ++++++++......++.....+.+.. ++...+.+..+.++..++...+.+.|++.+.+. +
T Consensus 198 tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~g~~~~~~~a~l-~~~gl~tl~~R~~~~~~~a~~la~~L~~~~~v~~v 276 (390)
T PRK08064 198 TKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSFGAVLGVQDCWL-VLRGLKTLHVRLEHSSETANKIALYLQEHPKVQNV 276 (390)
T ss_pred ceeccCCccceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHH-HHcccCcHHHHHHHHHHHHHHHHHHHhcCCCcceE
Confidence 998752 2344576655 56888888887776655433333332 334444466777777888889999998765432 1
Q ss_pred -cC----------------CCceEEEEEeCCCCCHHHHHHHHHhCCc---EEEeCC------------C----------C
Q 014492 359 -YP----------------SYSNFILCEVTSGMDAKKLKDDLAKMGV---MIRHYN------------N----------K 396 (423)
Q Consensus 359 -~p----------------~~~~~~~~~~~~~~~~~~l~~~L~~~gI---~v~~~~------------~----------~ 396 (423)
+| +.|..+.+++. + .+++...+...++ .++-|+ + .
T Consensus 277 ~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~-~--~~~~~~f~~~l~l~~~~~s~G~~~sl~~~~~~~~h~~~~~~~~~~~ 353 (390)
T PRK08064 277 YYPGLQTHLGFDIQQSQATSAGAVLSFTLQ-S--EEAVRQFVSHVKLPVFAVSLGAVESILSYPAKMSHAAMPKEERDER 353 (390)
T ss_pred ECCCCCCCccHHHHHHhCCCcceEEEEEEC-C--HHHHHHHHHhCCcceEcccCCCCcceeECCcccccccCCHHHHHhc
Confidence 11 23456777885 2 3344444445565 333331 1 1
Q ss_pred CC-CCeEEEEecCh---hhHHHHHHHHhhh
Q 014492 397 EL-KGYVRVSVGKP---EHTDALMECLMHL 422 (423)
Q Consensus 397 ~~-~~~iRis~~~~---~~~~~l~~al~~l 422 (423)
+. ++.||+|++.+ +..++|.+||+++
T Consensus 354 gi~~~liR~SvGle~~~dli~dl~~Al~~~ 383 (390)
T PRK08064 354 GITDGLLRLSVGLENVDDLIADFEQALSYV 383 (390)
T ss_pred CCCCCeEEEEeccCCHHHHHHHHHHHHHhc
Confidence 12 57899999854 3445556666543
No 202
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.91 E-value=8.7e-23 Score=200.08 Aligned_cols=280 Identities=16% Similarity=0.114 Sum_probs=199.8
Q ss_pred CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHH----HHHHCCCeEEEecC
Q 014492 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPR 199 (423)
Q Consensus 124 ~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~ 199 (423)
.+|+++...+|+++++++.|. +++++++|+++++..++.+++++||+|+++.|+|..+.. .++..|++++.++.
T Consensus 60 ~r~~~pt~~~Le~~lA~l~g~--~~~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~ 137 (394)
T PRK07050 60 GLHATPTSLALAQRLAEIEGG--RHALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYDP 137 (394)
T ss_pred CCCCCHHHHHHHHHHHHHhCC--CeEEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEECC
Confidence 457888889999999999994 589999999999999999999999999999999986553 45668999999874
Q ss_pred CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEE
Q 014492 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (423)
Q Consensus 200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i 278 (423)
. +.+++++.++ +++|+|++++|+||+|.+.+.+++.++|+. |+++|+|++|...... .. . ..+..+++
T Consensus 138 ~-----~~~~l~~~i~-~~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~~~~~-~~---l-~~GaDi~v 206 (394)
T PRK07050 138 L-----IGAGIADLIQ-PNTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSAGLAF-KP---F-EHGVDISV 206 (394)
T ss_pred C-----CHHHHHHhcC-CCCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCccccccc-CH---H-HcCCeEEE
Confidence 2 4578888886 689999999999999999999999999987 9999999999754321 11 1 22446999
Q ss_pred ccChhhhcc-cCcccccccc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC
Q 014492 279 RTFSKRAGL-AGLRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP 354 (423)
Q Consensus 279 ~S~SK~~g~-~G~R~G~i~~-~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 354 (423)
.|++|.++. .+.+.|+++. ++++.++++..+.. .++++.....+...++ .+..+.++..++..++.+.|++.+
T Consensus 207 ~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~lr~l~---tl~~Rl~~~~~~a~~la~~L~~~p 283 (394)
T PRK07050 207 QALTKYQSGGSDVLMGATITADAELHAKLKLARMRLGIGVSADDCSLVLRGLP---SLQVRLAAHDRSALEVAEWLKARP 283 (394)
T ss_pred EECCceecCCCCeeEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcCCC---cHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999998752 3355787776 67888877765543 3455555444443333 344566666777778888888765
Q ss_pred CCe-e-cC----------------CCceEEEEEeCCC---CCHHHHHHHHHhCCcEEEeCCC-----------------C
Q 014492 355 FLN-P-YP----------------SYSNFILCEVTSG---MDAKKLKDDLAKMGVMIRHYNN-----------------K 396 (423)
Q Consensus 355 ~~~-~-~p----------------~~~~~~~~~~~~~---~~~~~l~~~L~~~gI~v~~~~~-----------------~ 396 (423)
.+. + +| ..+..+.+.+..+ .+.++|.+.|...++.+.-|+. .
T Consensus 284 ~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~ 363 (394)
T PRK07050 284 EIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYSPAQVDAFVEALELFAIGWSWGGACSLAMPYDVASMRTAKWP 363 (394)
T ss_pred CccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCCHHHHHHHHHcCCCCeeccccCCccceEeeCcccccchhhcC
Confidence 443 2 12 1233455666532 3456677777655655543322 1
Q ss_pred CCCCeEEEEecChhhHHHHHHHHh
Q 014492 397 ELKGYVRVSVGKPEHTDALMECLM 420 (423)
Q Consensus 397 ~~~~~iRis~~~~~~~~~l~~al~ 420 (423)
..++.||||++.++ .++|.+-|+
T Consensus 364 ~~~~~iR~svGlE~-~~dl~~dl~ 386 (394)
T PRK07050 364 HRGTLVRLYIGLED-EADLIADLE 386 (394)
T ss_pred CCCCEEEEEeCcCC-HHHHHHHHH
Confidence 12368999999765 355554443
No 203
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.91 E-value=1.1e-22 Score=186.68 Aligned_cols=287 Identities=16% Similarity=0.243 Sum_probs=214.7
Q ss_pred CCCCC-cchHHHHHHHHHHh----C--CCCCcEEEeCCHHHHHHHHHHHhc-CCCCeEEEcCCCchhhHHHHHHCCCeEE
Q 014492 124 YIYPD-PESRRLRAALAKDS----G--LESDHILVGCGADELIDLIMRCVL-DPGDKIVDCPPTFTMYEFDAAVNGAAVV 195 (423)
Q Consensus 124 ~~Y~~-~g~~~lr~~ia~~~----g--~~~~~i~~t~G~~~al~~~~~~l~-~~gd~Vl~~~p~y~~~~~~~~~~g~~~~ 195 (423)
..|.+ .|.+-+|+.+|++. | .+|++|++|.|++.++..++..++ ++.+.|+++-|.|+.|......+|+..+
T Consensus 107 GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQYPLYsAti~l~~~~~v 186 (475)
T KOG0258|consen 107 GAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQYPLYSATISLLGGTQV 186 (475)
T ss_pred cccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEeecCCCchhHHHHHHhCCccc
Confidence 34754 47889999999997 4 467899999999999999999876 4678999999999999999999999888
Q ss_pred EecC--CCCCCCCHHHHHHHhhc----CCceEEEEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc-
Q 014492 196 KVPR--KSDFSLNVELIADAVER----EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES- 264 (423)
Q Consensus 196 ~v~~--~~~~~~d~~~l~~~i~~----~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~- 264 (423)
.+-+ +.+|.+|.++|++.+.+ -+++++++.||.||||.+++.+-+++|+++ +++|+.||+|.+-.+...
T Consensus 187 ~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~s 266 (475)
T KOG0258|consen 187 PYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDNVYTTGS 266 (475)
T ss_pred ceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHHHHhhccCCCc
Confidence 7775 46899999999988754 368999999999999999999999999875 999999999998665432
Q ss_pred hhhh-------hc-cC---CcEEEEccChhhh-cccCcccccccc---CHHHHHHHHHhcCC-CCCcHHHHHHHHHHhCC
Q 014492 265 RMEW-------VK-KH---DNLIVLRTFSKRA-GLAGLRVGYGAF---PLSIIEYLWRAKQP-YNVSVAAEVAACAALQN 328 (423)
Q Consensus 265 ~~~~-------~~-~~---~~~i~i~S~SK~~-g~~G~R~G~i~~---~~~~~~~l~~~~~~-~~~~~~~~~a~~~~l~~ 328 (423)
...+ .. .+ -.++.++|.||.+ |=.|.|-||+-. ++++.+.+.+.... ...+...|...-..++.
T Consensus 267 kFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~Kl~si~lc~~V~GQ~~vdl~VnP 346 (475)
T KOG0258|consen 267 KFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQIKKLASIKLCPQVSGQKLVDLVVNP 346 (475)
T ss_pred chHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHHHHHHHhhhhcCCccchhhhceecCC
Confidence 1111 11 12 2356788889985 446899999765 66766666655432 44555566655555543
Q ss_pred h--------HH---HHHHHHHHHHHHHHHHHHHccCCCCeec-CCCceEEEEEe--C---------CCCCHHHHH-HHHH
Q 014492 329 P--------IY---LEKVKEALIKERERLFKLLKDVPFLNPY-PSYSNFILCEV--T---------SGMDAKKLK-DDLA 384 (423)
Q Consensus 329 ~--------~~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~~~~~~~~~~--~---------~~~~~~~l~-~~L~ 384 (423)
+ .+ .+...+.++++...+.+.++.+.++.+. +.+++|++.++ | .+...++|+ ..|+
T Consensus 347 P~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~~gi~cn~~qGAMY~fP~i~lP~kaie~A~~~~~~PD~FYc~~LL 426 (475)
T KOG0258|consen 347 PKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSLEGISCNPVQGAMYLFPQISLPPKAIEAAKALGIAPDEFYCLKLL 426 (475)
T ss_pred CCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhcCceeeccCccceeecccccCCHHHHHHHHHhCCCCcHHHHHHHH
Confidence 1 12 3345667777888888999999888864 56778888544 4 134455654 4555
Q ss_pred -hCCcEEEeCCCCC---CCCeEEEEecChh
Q 014492 385 -KMGVMIRHYNNKE---LKGYVRVSVGKPE 410 (423)
Q Consensus 385 -~~gI~v~~~~~~~---~~~~iRis~~~~~ 410 (423)
..||.+.||+.++ +.-++|.++-...
T Consensus 427 e~tGIcvVPGSGFGQ~~GtyH~R~TiLp~~ 456 (475)
T KOG0258|consen 427 EATGICVVPGSGFGQKEGTYHFRTTILPPG 456 (475)
T ss_pred HhcCeEEecCCCCCCCCceeEEEEeecCch
Confidence 7899999998853 3448999987654
No 204
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.91 E-value=4.3e-22 Score=194.61 Aligned_cols=217 Identities=19% Similarity=0.188 Sum_probs=164.6
Q ss_pred CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHH---HHCCCeEEEecCC
Q 014492 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRK 200 (423)
Q Consensus 124 ~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~ 200 (423)
.+|+++...+|++.+++++|. +++++++|+++++..++.+++++||+|+++.|.|..+...+ +..|++++.+.
T Consensus 48 ~r~~np~~~~lE~~lA~l~g~--~~~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~-- 123 (385)
T PRK08574 48 SREENPTLRPLEEALAKLEGG--VDALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAY-- 123 (385)
T ss_pred ECCCCccHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEEC--
Confidence 345777889999999999995 46778888899999999999999999999999998766555 44688777653
Q ss_pred CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEc
Q 014492 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR 279 (423)
Q Consensus 201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~ 279 (423)
+|++++++.+.+.++|+|++++|+||||.+++.+++.++|+. |+++|+|++|...... ... ..+..+++.
T Consensus 124 ----~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~~~~-~~l----~~GaDivv~ 194 (385)
T PRK08574 124 ----PSTEDIIEAIKEGRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATPLLY-RPL----RHGADFVVH 194 (385)
T ss_pred ----CCHHHHHHhcCccCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccC-Chh----hhCCcEEEe
Confidence 368999999974389999999999999999999999999987 9999999999643221 111 234569999
Q ss_pred cChhhhcccCccc-ccccc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCC
Q 014492 280 TFSKRAGLAGLRV-GYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPF 355 (423)
Q Consensus 280 S~SK~~g~~G~R~-G~i~~-~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 355 (423)
|++|.++.+|-.+ |+++. ++++.++++..+.. ..+++.....+...++ .+..+.++..++..++.+.|++.+.
T Consensus 195 S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~~~g~~~~p~~a~l~l~~l~---tL~~R~~~~~~na~~la~~L~~~p~ 271 (385)
T PRK08574 195 SLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRRRLGTIMQPFEAYLVLRGLK---TLEVRFERQCRNAMAIAEFLSEHPK 271 (385)
T ss_pred eCceeecCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcccC---cHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999987666554 64554 77888877655443 3455555444444443 3556666677788889999987764
Q ss_pred C
Q 014492 356 L 356 (423)
Q Consensus 356 ~ 356 (423)
+
T Consensus 272 v 272 (385)
T PRK08574 272 V 272 (385)
T ss_pred c
Confidence 4
No 205
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.91 E-value=3.2e-22 Score=197.84 Aligned_cols=163 Identities=18% Similarity=0.202 Sum_probs=136.8
Q ss_pred CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchh----hHHHHHHCCCeEEEecC
Q 014492 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPR 199 (423)
Q Consensus 124 ~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~ 199 (423)
.+|+++...+|++.+++++|. +..++++++++++..++.+++++||+|+++.+.|+. +...++..|++++.++.
T Consensus 52 sr~~~p~~~~le~~lA~l~g~--~~~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~ 129 (418)
T TIGR01326 52 SRLMNPTTDVLEQRIAALEGG--VAALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDP 129 (418)
T ss_pred ECCCChhHHHHHHHHHHHhCC--CeEEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECC
Confidence 456778788999999999995 467788888899999998899999999999999853 34456678999999984
Q ss_pred CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEE
Q 014492 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (423)
Q Consensus 200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i 278 (423)
+ |++++++.+. +++++|++++|+||||.+.+.+++.++|+. |+++|+|++|...... .. + ..+.++++
T Consensus 130 ~-----d~~~l~~~l~-~~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~~~~~-~~---l-~~g~Divv 198 (418)
T TIGR01326 130 D-----DPEEFEKAID-ENTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFATPYLC-RP---I-DHGADIVV 198 (418)
T ss_pred C-----CHHHHHHhcC-cCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCchhhcC-Cc---h-hcCCeEEE
Confidence 2 7999999997 689999999999999999999999999987 9999999999743211 11 1 24568999
Q ss_pred ccChhhhcccCccccccccCH
Q 014492 279 RTFSKRAGLAGLRVGYGAFPL 299 (423)
Q Consensus 279 ~S~SK~~g~~G~R~G~i~~~~ 299 (423)
.|+||.++.+|+|+||+++++
T Consensus 199 ~S~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 199 HSATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred ECccccccCCccceEEEEEec
Confidence 999999998999999988854
No 206
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.90 E-value=2.5e-21 Score=189.22 Aligned_cols=309 Identities=13% Similarity=0.053 Sum_probs=200.0
Q ss_pred CCeeEcCCC-CCCCCCCHHHHHHHh----cCC-C-----CCCCC------Cc-chHHHHHHHHHHhCCCCCcEEEeCCHH
Q 014492 95 EDIVKIDAN-ENPYGPPPEVREALG----QLK-F-----PYIYP------DP-ESRRLRAALAKDSGLESDHILVGCGAD 156 (423)
Q Consensus 95 ~~~i~l~~~-~~~~~~~~~v~~al~----~~~-~-----~~~Y~------~~-g~~~lr~~ia~~~g~~~~~i~~t~G~~ 156 (423)
.++++|.+| +-++..+|.+.+++. +.. . .+..+ .. -..++|+.+|+++|.+ +.+++++|+.
T Consensus 4 ~~~~~~~s~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~-~~l~~~sG~~ 82 (370)
T PRK05937 4 SLSIDFVTNDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAP-EAFIVPSGYM 82 (370)
T ss_pred CceEEeECCCccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCC-eEEEECChHH
Confidence 456888776 445566666655444 321 0 11111 11 2568999999999974 4578888886
Q ss_pred HHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CCceEEEEcCCCCCc
Q 014492 157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKCIFLTSPNNPD 231 (423)
Q Consensus 157 ~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~i~l~~p~NPt 231 (423)
..+ .+...+.++||.|++..-.|......++......+.++ ..|++++++.+++ .++.+|++++++|++
T Consensus 83 a~~-~~~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~-----~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~ 156 (370)
T PRK05937 83 ANL-GLCAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSFR-----HNDLDHLESLLESCRQRSFGRIFIFVCSVYSFK 156 (370)
T ss_pred HHH-HHHHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEec-----CCCHHHHHHHHHhhhccCCCcEEEEEecCCCCC
Confidence 544 45555667888888878788766666665544444443 4588999998863 235577788999999
Q ss_pred CcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhh---hhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHH
Q 014492 232 GSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRME---WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR 307 (423)
Q Consensus 232 G~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~---~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~ 307 (423)
|.+.|.+++.++++. |+++++||+|.....+..... .....+..+++.||||.+|..|. .++..++..+.+..
T Consensus 157 G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g~~G~---~vl~~~~~~~~~~~ 233 (370)
T PRK05937 157 GTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALGSMGA---ALLSSSEVKQDLML 233 (370)
T ss_pred CCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhhhcCce---EEEcCHHHHHHHHH
Confidence 999999999999997 999999999986443222111 11112223678999999997773 34555666555553
Q ss_pred hcCC----CCCcHHHHHHHHHHhCCh-HHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHH
Q 014492 308 AKQP----YNVSVAAEVAACAALQNP-IYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDD 382 (423)
Q Consensus 308 ~~~~----~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~ 382 (423)
...+ .+.+++...++.++++.. +..+..+++++++++++.+.|+..+. +....+.++ +.+..++.+.
T Consensus 234 ~~~~~~~s~~~~~~~~~a~~aal~~l~~~~~~~~~~l~~l~~~l~~~l~~~~~-------~~~~~i~~~-~~~~~~~~~~ 305 (370)
T PRK05937 234 NSPPLRYSTGLPPHLLISIQVAYDFLSQEGELARKQLFRLKEYFAQKFSSAAP-------GCVQPIFLP-GISEQELYSK 305 (370)
T ss_pred hCCCCeecCCCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCCCC-------CCEEEEEeC-ChhHHHHHHH
Confidence 3222 345666665555555321 11234567788888888888764321 112224444 3456788889
Q ss_pred HHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492 383 LAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL 422 (423)
Q Consensus 383 L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l 422 (423)
|.++||.+..... ...+++||+++ +.+|++++.++|+++
T Consensus 306 L~~~gi~v~~~~~-~~~~~iRis~~~~~t~edid~l~~~L~~~ 347 (370)
T PRK05937 306 LVETGIRVGVVCF-PTGPFLRVNLHAFNTEDEVDILVSVLATY 347 (370)
T ss_pred HHHCCeeEEeeCC-CCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Confidence 9999999875432 23568999994 777788888877653
No 207
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.90 E-value=7.1e-22 Score=196.32 Aligned_cols=327 Identities=12% Similarity=0.083 Sum_probs=206.8
Q ss_pred CCCCCCeeEcCCCCCC--CC-CCHHHHHHHhcC-C-CCCCC-C---CcchHHHHHHHHHHhCCCC-CcEEEeCCHHHHHH
Q 014492 91 GRKPEDIVKIDANENP--YG-PPPEVREALGQL-K-FPYIY-P---DPESRRLRAALAKDSGLES-DHILVGCGADELID 160 (423)
Q Consensus 91 ~~~~~~~i~l~~~~~~--~~-~~~~v~~al~~~-~-~~~~Y-~---~~g~~~lr~~ia~~~g~~~-~~i~~t~G~~~al~ 160 (423)
..+++.++|+..+... ++ .+|++.+++.+. . ..+.+ + .+...++-+.+++..+.+. +.++++++++++++
T Consensus 37 d~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~~~f~~sGsea~e 116 (425)
T PRK08088 37 DVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEKMNQKVPGDFAKKTLLVTTGSEAVE 116 (425)
T ss_pred eCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCCCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHH
Confidence 3457788999876433 33 368888877662 2 11111 2 2233456666666655433 46777777777777
Q ss_pred HHHHHhc--CCCCeEEEcCCCchhhHHHHHHCCCeE----------------EEecCCCCCCCC----HHHHHHHhh---
Q 014492 161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAVNGAAV----------------VKVPRKSDFSLN----VELIADAVE--- 215 (423)
Q Consensus 161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~~~----------------~~v~~~~~~~~d----~~~l~~~i~--- 215 (423)
.+++... .....|+...++|++....+...+... +.+|.+.+ ..+ ++.+++.+.
T Consensus 117 ~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~l~~~l~~~~ 195 (425)
T PRK08088 117 NAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLH-GVSEDDAIASIERIFKNDA 195 (425)
T ss_pred HHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCcccc-CccHHHHHHHHHHHHHhcc
Confidence 6666432 223557777999986665544433221 11221111 122 556787775
Q ss_pred -cCCceEEEEc-CCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccC
Q 014492 216 -REKPKCIFLT-SPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAG 289 (423)
Q Consensus 216 -~~~~~~i~l~-~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G 289 (423)
..++.+|++. ..+++.+...+.+.+++|.+. |+++|+||+|.++...+... .....+.+..+.||||.++ +|
T Consensus 196 ~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~-~~~~~~~~pdi~s~sK~l~-~G 273 (425)
T PRK08088 196 APEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLF-AMEQMGVAADLTTFAKSIA-GG 273 (425)
T ss_pred CCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchh-HHhhcCCCCCEEEEecccc-CC
Confidence 2567788887 446665556677666666553 99999999999875443321 2222333455789999998 99
Q ss_pred ccccccccCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhCCh---HHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCce
Q 014492 290 LRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNP---IYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSN 364 (423)
Q Consensus 290 ~R~G~i~~~~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~ 364 (423)
+|+||+++++++++.+..... .++.+++.|.++..+|+.. ++++..++..++.++.+.+.+++.+.+....+.|.
T Consensus 274 ~rig~v~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g~G~ 353 (425)
T PRK08088 274 FPLAGVTGRAEVMDAIAPGGLGGTYAGNPIACAAALAVLKVFEQENLLQKANALGEKLKDGLLAIAEKHPEIGDVRGLGA 353 (425)
T ss_pred CcceeeEecHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeccce
Confidence 999999999999988765443 3677899999999998753 34555555555555555555555654332334489
Q ss_pred EEEEEeCCC--------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 365 FILCEVTSG--------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 365 ~~~~~~~~~--------~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
++|+.+.+. .....+.+.+.++||.+.++..+ .+.+||+++...+.+++.+++++|
T Consensus 354 ~~~l~l~~~~~~~~p~~~~~~~l~~~~~~~Gv~~~~~~~~--~~~iRl~~~~~~t~~ei~~~i~~l 417 (425)
T PRK08088 354 MIAIELFEDGDHSKPNAKLTAQIVARARDKGLILLSCGPY--YNVLRILVPLTIEDAQIRQGLEII 417 (425)
T ss_pred EEEEEEecCCCCCCCCHHHHHHHHHHHHhCCCEEecCCCC--CCEEEEECCCCcCHHHHHHHHHHH
Confidence 999998422 23677888888999998865432 478999998433346676666654
No 208
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.90 E-value=2.4e-21 Score=188.23 Aligned_cols=251 Identities=18% Similarity=0.191 Sum_probs=184.4
Q ss_pred CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC-CCC
Q 014492 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFS 204 (423)
Q Consensus 127 ~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~ 204 (423)
..+...++++++++++|. +++++++|+++++..++..+ +++||+|+++.++|..+...+...|++++.++.+. ++.
T Consensus 16 ~~~~~~~~~~~la~~~~~--~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 93 (352)
T cd00616 16 LGPKVREFEKAFAEYLGV--KYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATANAILLLGATPVFVDIDPDTYN 93 (352)
T ss_pred CCHHHHHHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHHHcCCeEEEEecCCCcCC
Confidence 445678999999999995 46778888999999999988 58999999999999999888899999999999765 788
Q ss_pred CCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccC-CCchhhhhccCCcEEEEccCh
Q 014492 205 LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSG-LESRMEWVKKHDNLIVLRTFS 282 (423)
Q Consensus 205 ~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~-~~~~~~~~~~~~~~i~i~S~S 282 (423)
+|++++++.++ +++++|+++| ++|.+.+.+++.++|+. |+++|+|++|..... ..... +.. ..+.+.|++
T Consensus 94 ~d~~~l~~~i~-~~~~~v~~~~---~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~~~---~~~-~d~~~~S~~ 165 (352)
T cd00616 94 IDPELIEAAIT-PRTKAIIPVH---LYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKGRKV---GTF-GDAGAFSFH 165 (352)
T ss_pred cCHHHHHHhcC-cCCeEEEEEC---CCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeECCEEc---ccC-cceeEEcCC
Confidence 99999999996 6899999764 69999999999999987 999999999985432 11111 111 135666765
Q ss_pred --hhhcccCccccccccC-HHHHHHHHHhcCC-----------------CCCcHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 014492 283 --KRAGLAGLRVGYGAFP-LSIIEYLWRAKQP-----------------YNVSVAAEVAACAALQNPIYLEKVKEALIKE 342 (423)
Q Consensus 283 --K~~g~~G~R~G~i~~~-~~~~~~l~~~~~~-----------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 342 (423)
|.++ +.+.|+++.+ +++.+++...... +.++.+....+... .+.+++..++.+++
T Consensus 166 ~~K~~~--~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~---l~~~~~~~~~~~~~ 240 (352)
T cd00616 166 PTKNLT--TGEGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAAIGLAQ---LEKLDEIIARRREI 240 (352)
T ss_pred CCCCCc--ccCceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHHHHHHHH---HHhhHHHHHHHHHH
Confidence 8763 3346777775 5777766543211 11233333322222 23456777788889
Q ss_pred HHHHHHHHccCCCCeecC-CC-----ceEEEEEeCC--CCCHHHHHHHHHhCCcEEEe
Q 014492 343 RERLFKLLKDVPFLNPYP-SY-----SNFILCEVTS--GMDAKKLKDDLAKMGVMIRH 392 (423)
Q Consensus 343 ~~~l~~~L~~~~~~~~~p-~~-----~~~~~~~~~~--~~~~~~l~~~L~~~gI~v~~ 392 (423)
.+++.+.|.+++++.+.. .. ...+.+.+++ +.+.+++.+.|.++||.+..
T Consensus 241 ~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gI~~~~ 298 (352)
T cd00616 241 AERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAGESRDELIEALKEAGIETRV 298 (352)
T ss_pred HHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcCCCCHHHHHHHHHHCCCCeee
Confidence 999999999876665432 11 2344566664 67899999999999997763
No 209
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.90 E-value=1.5e-21 Score=190.54 Aligned_cols=275 Identities=20% Similarity=0.207 Sum_probs=195.4
Q ss_pred CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHH----HHHHCCCeEEEecCCCC
Q 014492 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRKSD 202 (423)
Q Consensus 127 ~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~~~ 202 (423)
+++...+|++.+++++|. ++++++++++.++..++. ++++||+|+++.+.|..+.. .++..|++++.++.
T Consensus 45 ~~p~~~~le~~la~l~g~--~~~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~--- 118 (378)
T TIGR01329 45 GNPTRTALESLLAKLDKA--DRAFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDT--- 118 (378)
T ss_pred CChHHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCC---
Confidence 455578999999999996 455666666779988887 78999999999999986544 34568999999985
Q ss_pred CCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccC
Q 014492 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF 281 (423)
Q Consensus 203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~ 281 (423)
.|+++++++++ +++|+|++++|+||||.+.+.+++.++|+. |+++|+|++|..... ..... .+..+++.|+
T Consensus 119 --~d~~~le~~i~-~~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~~-~~~l~----~g~Di~v~S~ 190 (378)
T TIGR01329 119 --TDLDKVKAALG-PKTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPLL-CNPLE----LGADIVYHSA 190 (378)
T ss_pred --CCHHHHHHhcC-cCceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCccccc-CChhh----cCCcEEEEec
Confidence 27899999997 789999999999999999999999999987 999999999853322 11121 2345999999
Q ss_pred hhhhccc-Ccccccccc-CHHHHHHHHHhcC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCe
Q 014492 282 SKRAGLA-GLRVGYGAF-PLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLN 357 (423)
Q Consensus 282 SK~~g~~-G~R~G~i~~-~~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 357 (423)
+|.++.+ +.+.|++++ ++++.+++..... ...+++.....+ +...+.+..+.++..++...+.+.|++.+.+.
T Consensus 191 tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~---~~~l~tl~~R~e~~~~na~~la~~L~~~~~v~ 267 (378)
T TIGR01329 191 TKFLAGHSDVMAGVLAVKGEEIAKKVYFLQNSTGSGLAPFDCWLL---LRGIKTLAIRIEKQQENARAIAMFLSTHPRVK 267 (378)
T ss_pred ceeccCCccceeEEEEeCcHHHHHHHHHHHHhcCCcCCHHHHHHH---HccCCCHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 9987533 477899987 4556576765544 234555544332 33334466667777788888888887765332
Q ss_pred --ecC----------------CCceEEEEEeCCCCC-HHHHHHHHHhCCcEEEeCCC------C----------------
Q 014492 358 --PYP----------------SYSNFILCEVTSGMD-AKKLKDDLAKMGVMIRHYNN------K---------------- 396 (423)
Q Consensus 358 --~~p----------------~~~~~~~~~~~~~~~-~~~l~~~L~~~gI~v~~~~~------~---------------- 396 (423)
.+| ..+..+.+.+ ++.. +.+|++.|...++.++-|+. +
T Consensus 268 ~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~-~~~~~~~~~~~~L~~~~i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~ 346 (378)
T TIGR01329 268 KVRYAGLPSHPGFHLHFSQAKGAGSVLSFET-GSVALSKRLVEATKLFSITVSFGSVNSLISMPCFMSHASIPAEVREER 346 (378)
T ss_pred EEECCCCCCCccHHHHHHhCCCcceEEEEEE-CCHHHHHHHHHhCcCcccccCCCCCCceeeCCCccccccCCHHHHHhc
Confidence 121 1345667777 3444 67888888766777764432 0
Q ss_pred -CCCCeEEEEecChhhHHHHHHHHh
Q 014492 397 -ELKGYVRVSVGKPEHTDALMECLM 420 (423)
Q Consensus 397 -~~~~~iRis~~~~~~~~~l~~al~ 420 (423)
-.++.||||++.++ .++|.+-++
T Consensus 347 gi~~~liR~svGlE~-~~dl~~dl~ 370 (378)
T TIGR01329 347 GLPEDLVRLSVGIED-VDDLISDLD 370 (378)
T ss_pred CCCCCeEEEEeccCC-HHHHHHHHH
Confidence 11468999999765 355554443
No 210
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.90 E-value=1.4e-21 Score=193.04 Aligned_cols=244 Identities=18% Similarity=0.185 Sum_probs=175.5
Q ss_pred CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchh----hHHHHHHCCCeEEEecCC
Q 014492 125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRK 200 (423)
Q Consensus 125 ~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~ 200 (423)
+++++....|++.++++.|. +..++++|+++++..++..++++||+|+++.+.|+. +...++..|++++.++.
T Consensus 60 r~~~p~~~~Le~~lA~leg~--~~al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~- 136 (431)
T PRK08248 60 RIMNPTTDVFEKRIAALEGG--IGALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDP- 136 (431)
T ss_pred CCCCchHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECC-
Confidence 34666778999999999994 467788888899999998899999999999998863 33456678999999984
Q ss_pred CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEc
Q 014492 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR 279 (423)
Q Consensus 201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~ 279 (423)
.|+++++++++ +++++|++++|+||||.+++.+++.++|+. |+++|+|++|..... ..+ + ..+.++++.
T Consensus 137 ----~d~e~l~~ai~-~~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~~~~-~~p---l-~~gaDivv~ 206 (431)
T PRK08248 137 ----SDPENFEAAIT-DKTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFASPYL-LRP---I-EHGADIVVH 206 (431)
T ss_pred ----CCHHHHHHhcC-CCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCcccc-CCh---h-HcCCCEEEE
Confidence 37899999997 689999999999999999999999999987 999999999873211 111 1 356679999
Q ss_pred cChhhhcccCccccccccC-HHHH-----------------------H----------HHH--HhcCCCCCcHHHHHHHH
Q 014492 280 TFSKRAGLAGLRVGYGAFP-LSII-----------------------E----------YLW--RAKQPYNVSVAAEVAAC 323 (423)
Q Consensus 280 S~SK~~g~~G~R~G~i~~~-~~~~-----------------------~----------~l~--~~~~~~~~~~~~~~a~~ 323 (423)
|++|.+|.+|.++|++++. .+.. + ... .......+++.....
T Consensus 207 S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l-- 284 (431)
T PRK08248 207 SATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYITKARVQLLRDLGAALSPFNSFL-- 284 (431)
T ss_pred cCccccCCCCCceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHH--
Confidence 9999999999999887763 2110 0 000 001112344444333
Q ss_pred HHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCe-e-cC-----------------CCceEEEEEeCCC-CCHHHHHHHH
Q 014492 324 AALQNPIYLEKVKEALIKERERLFKLLKDVPFLN-P-YP-----------------SYSNFILCEVTSG-MDAKKLKDDL 383 (423)
Q Consensus 324 ~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~p-----------------~~~~~~~~~~~~~-~~~~~l~~~L 383 (423)
+++..+.+..+.++..++..++.+.|++.+.+. + +| ..|..+.+++.++ .....|++.|
T Consensus 285 -~~rgl~tl~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l 363 (431)
T PRK08248 285 -LLQGLETLHLRMERHSENALAVAKFLEEHEAVEWVSYPGLPSHPSYELAKKYLPKGQGAILTFGIKGGVEAGKKLIDSV 363 (431)
T ss_pred -HhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHhC
Confidence 333334466777778889999999999877553 1 22 1245677787533 2234555555
Q ss_pred H
Q 014492 384 A 384 (423)
Q Consensus 384 ~ 384 (423)
.
T Consensus 364 ~ 364 (431)
T PRK08248 364 K 364 (431)
T ss_pred C
Confidence 4
No 211
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.90 E-value=3.6e-21 Score=187.31 Aligned_cols=236 Identities=16% Similarity=0.077 Sum_probs=175.8
Q ss_pred CCCCCCHHHHHHHhcC-CCCCCC---CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCc
Q 014492 105 NPYGPPPEVREALGQL-KFPYIY---PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF 180 (423)
Q Consensus 105 ~~~~~~~~v~~al~~~-~~~~~Y---~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y 180 (423)
..+..++++.++.... ...+.| .++....||++++++.+. +++++++|+++++..++.+++++||+|++++|.|
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~Y~r~~npt~~~Le~~iA~le~~--~~~~~~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y 110 (394)
T PRK09028 33 VVFDTVAEMRHAAKNRANGEMFYGRRGTPTHFAFQAAIVELEGG--AGTALYPSGAAAISNALLSFLKAGDHLLMVDSCY 110 (394)
T ss_pred cccCCHHHHHHHhccCccCCceecCCCCchHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEECCCc
Confidence 3455556666655432 122345 345567999999999864 4789999999999999999999999999999999
Q ss_pred hhhHHH----HHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccC
Q 014492 181 TMYEFD----AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEA 255 (423)
Q Consensus 181 ~~~~~~----~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Dea 255 (423)
..+... .+..|+++..++.. |.+.+++.+. +++|+|++++|+||||.+.+++++.++|+. |+++|+|++
T Consensus 111 ~~t~~l~~~~l~~~Gi~v~~v~~~-----~~e~l~~~l~-~~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t 184 (394)
T PRK09028 111 EPTRDLCDKILKGFGIETTYYDPM-----IGEGIRELIR-PNTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNT 184 (394)
T ss_pred HHHHHHHHHhhhhcceEEEEECCC-----CHHHHHHhcC-cCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECC
Confidence 766543 34578888877632 4578888886 689999999999999999999999999987 999999999
Q ss_pred CccccCCCchhhhhccCCcEEEEccChhhhccc-CccccccccCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHH
Q 014492 256 YTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLA-GLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYL 332 (423)
Q Consensus 256 y~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~-G~R~G~i~~~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~ 332 (423)
|...... .+. ..+-++++.|.+|.++-. ....|+++.++++.+.+...... ..+++.....+...| +.+
T Consensus 185 ~a~p~~~-~Pl----~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl---~TL 256 (394)
T PRK09028 185 WASPINS-RPF----EMGVDISIQAATKYIVGHSDVMLGTATANEKHWDQLREHSYLMGQCTSPDDVYLAMRGL---RTL 256 (394)
T ss_pred ccccccC-Ccc----ccCceEEEEeCCeEecCCCCEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHccc---CcH
Confidence 9843211 111 345679999999987433 35678887788777766644332 345666655554444 346
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCC
Q 014492 333 EKVKEALIKERERLFKLLKDVPFL 356 (423)
Q Consensus 333 ~~~~~~~~~~~~~l~~~L~~~~~~ 356 (423)
..+.++..++...+.+.|++.+.+
T Consensus 257 ~lR~~~~~~na~~la~~L~~~p~v 280 (394)
T PRK09028 257 GVRLAQHEKNALKVANWLATRPEV 280 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCc
Confidence 777788889999999999987755
No 212
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.90 E-value=2e-21 Score=188.32 Aligned_cols=280 Identities=17% Similarity=0.160 Sum_probs=194.8
Q ss_pred CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCe-EEEecCCCC
Q 014492 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAA-VVKVPRKSD 202 (423)
Q Consensus 124 ~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~-~~~v~~~~~ 202 (423)
.+|+++...+|+++++++.| .+++++++|+++++.+++. ++++||+|+++.+.|............+ -+.+ .
T Consensus 49 ~R~~~p~~~~le~~lA~leg--~~~~v~~~sG~aAi~~~l~-~l~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~----~ 121 (364)
T PRK07269 49 TRTKNPTRAKLEETLAAIES--ADYALATSSGMSAIVLAFS-VFPVGSKVVAVRDLYGGSFRWFNQQEKEGRFHF----T 121 (364)
T ss_pred eCCCCccHHHHHHHHHHHhC--CCeEEEeCCHHHHHHHHHH-HhCCCCEEEEecCCcCchHHHHHHHHhcCcEEE----E
Confidence 56788889999999999998 4689999999999999995 6799999999999997443332221000 1111 2
Q ss_pred CCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccC
Q 014492 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF 281 (423)
Q Consensus 203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~ 281 (423)
+..|+++++++++ +++|+|++++|+||||.+.+.+++.++++. |+++|+|++|...... .+. .....+++.|+
T Consensus 122 ~~~d~~~l~~~i~-~~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~~~~~-~pl----~~gaDivv~S~ 195 (364)
T PRK07269 122 YANTEEELIAAIE-EDTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYSPIYQ-RPI----ELGADIVLHSA 195 (364)
T ss_pred ecCCHHHHHHhcC-cCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccC-Cch----hhCCcEEEecC
Confidence 3468999999997 689999999999999999999999999987 9999999997633221 222 23345999999
Q ss_pred hhhhcccCc-ccccccc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCe
Q 014492 282 SKRAGLAGL-RVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLN 357 (423)
Q Consensus 282 SK~~g~~G~-R~G~i~~-~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 357 (423)
+|.++..|- =.|++++ ++++.++++..... ..+++.....+...|+. +..+.++.+++..++.+.|++.+.+.
T Consensus 196 tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~~~G~~~s~~~a~l~~~~L~t---L~~r~~~~~~na~~~a~~L~~~p~v~ 272 (364)
T PRK07269 196 TKYLSGHNDVLAGVVVTNDLELYEKLFYNLNTTGAVLSPFDSYLLMRGLKT---LSLRMERSTANAQEVVAFLKKSPAVK 272 (364)
T ss_pred ceeccCCCcccceEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCc---HHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 998864332 2477777 56777777644422 35677766666666644 67777778899999999999887653
Q ss_pred --ecCCCceEEEEEeCCCCCHHHHHHHHHhC----------CcEEEeCCC-------------CCCCCeEEEEecChhhH
Q 014492 358 --PYPSYSNFILCEVTSGMDAKKLKDDLAKM----------GVMIRHYNN-------------KELKGYVRVSVGKPEHT 412 (423)
Q Consensus 358 --~~p~~~~~~~~~~~~~~~~~~l~~~L~~~----------gI~v~~~~~-------------~~~~~~iRis~~~~~~~ 412 (423)
.+|+.|..+.+.+........|.+.|.-. .+.+.|... .-.++.||||++.++ .
T Consensus 273 ~v~ypg~gg~~sf~~~~~~~~~~f~~~l~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~r~~~Gi~~~liRlsvGlE~-~ 351 (364)
T PRK07269 273 EVLYTGKGGMISFKVADETRIPHILNSLKVFTFAESLGGVESLITYPTTQTHADIPAEVRHSYGLTDDLLRLSIGIED-A 351 (364)
T ss_pred EEeCCCcCcEEEEEECCHHHHHHHHHhCCcceEccCCCCcCeEeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCC-H
Confidence 35777777777774212233444444311 122223211 012568999999875 4
Q ss_pred HHHHHHHh
Q 014492 413 DALMECLM 420 (423)
Q Consensus 413 ~~l~~al~ 420 (423)
++|.+-|+
T Consensus 352 ~dli~dl~ 359 (364)
T PRK07269 352 RDLIADLK 359 (364)
T ss_pred HHHHHHHH
Confidence 66655544
No 213
>PRK05939 hypothetical protein; Provisional
Probab=99.90 E-value=2.3e-21 Score=189.94 Aligned_cols=276 Identities=18% Similarity=0.193 Sum_probs=186.8
Q ss_pred CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhH---HHHHHCCCeEEEecCCCCC
Q 014492 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE---FDAAVNGAAVVKVPRKSDF 203 (423)
Q Consensus 127 ~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~---~~~~~~g~~~~~v~~~~~~ 203 (423)
+++....|++.++++.|.+ ..+++++ ++.++..++.+++++||+|+++.+.|+... ..++..|++++.++.
T Consensus 45 g~p~~~~lE~~la~leg~~-~~v~~ss-G~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~---- 118 (397)
T PRK05939 45 GTPTTAALEAKITKMEGGV-GTVCFAT-GMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDA---- 118 (397)
T ss_pred CCHHHHHHHHHHHHHhCCC-eEEEeCC-HHHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECC----
Confidence 4455679999999999864 3555555 478999999999999999999999997433 345668999999984
Q ss_pred CCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCcccc-CCCchhhhhccCCcEEEEccC
Q 014492 204 SLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLESRMEWVKKHDNLIVLRTF 281 (423)
Q Consensus 204 ~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~-~~~~~~~~~~~~~~~i~i~S~ 281 (423)
.|++++++.+. +++++|++++|+||||.+.+.+++.++|+. |+++|+|++|.... ..+ ...+..+++.|+
T Consensus 119 -~d~e~l~~~l~-~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~~~~~~~------~~~gaDivv~S~ 190 (397)
T PRK05939 119 -TDVQNVAAAIR-PNTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTSPWLFRP------KDVGASLVINSL 190 (397)
T ss_pred -CCHHHHHHhCC-CCCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCcccccccCc------cccCCEEEEecC
Confidence 37899999997 789999999999999999999999999987 99999999986322 111 123567999999
Q ss_pred hhhhcccCccccccccCHHH----------------------HHHHHHh---cCCCCCcHHHHHHHHHHhCChHHHHHHH
Q 014492 282 SKRAGLAGLRVGYGAFPLSI----------------------IEYLWRA---KQPYNVSVAAEVAACAALQNPIYLEKVK 336 (423)
Q Consensus 282 SK~~g~~G~R~G~i~~~~~~----------------------~~~l~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 336 (423)
||.++..|.++|+++.++.. +..+... .....+++..... +++..+.+..+.
T Consensus 191 sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l---~~rgl~tl~~R~ 267 (397)
T PRK05939 191 SKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLRDMGATLSSEAAHR---IAIGAETLALRV 267 (397)
T ss_pred eecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHHhcCCCCCHHHHHH---HHcCcCcHHHHH
Confidence 99999889999988764211 1111110 1112344444333 333334456666
Q ss_pred HHHHHHHHHHHHHHccCCCCe-e-cC----------------CCceEEEEEeCCCCCHHHHHHHHH--hCCcEE------
Q 014492 337 EALIKERERLFKLLKDVPFLN-P-YP----------------SYSNFILCEVTSGMDAKKLKDDLA--KMGVMI------ 390 (423)
Q Consensus 337 ~~~~~~~~~l~~~L~~~~~~~-~-~p----------------~~~~~~~~~~~~~~~~~~l~~~L~--~~gI~v------ 390 (423)
++..++...+.+.|++.+.+. + +| +.|..+.+++.++.+...|++.|. ..+..+
T Consensus 268 ~~~~~na~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~g~g~l~sf~~~~~~~~~~f~~~l~l~~~~~s~G~~~sl 347 (397)
T PRK05939 268 DRSCSNALALAQFLEAHPKVARVYYPGLASHPQHARATELFRHYGGLLSFELADGIDCFDFLNRLKLVIKATHLGDTRTL 347 (397)
T ss_pred HHHHHHHHHHHHHHHhCCCccEEECCCCCCCchHHHHHHhccCCceEEEEEeCCHHHHHHHHHhCCcceEccCCCCCCee
Confidence 667779999999998876543 2 33 235677788863323344444442 111111
Q ss_pred --EeCC--C-----------CCCCCeEEEEecChhhHHHHHHHHh
Q 014492 391 --RHYN--N-----------KELKGYVRVSVGKPEHTDALMECLM 420 (423)
Q Consensus 391 --~~~~--~-----------~~~~~~iRis~~~~~~~~~l~~al~ 420 (423)
.|.. + .-.++.||||++.++ .++|.+.|+
T Consensus 348 ~~~p~~~~~~~~~~~~~~~~gi~~~lvR~svGlEd-~~dLi~dl~ 391 (397)
T PRK05939 348 VIPVAPTIYYEMGAERRASMGIADSLIRVSVGIED-EADLIADFE 391 (397)
T ss_pred eecCcccccccCCHHHHHhcCCCCCeEEEEeCCCC-HHHHHHHHH
Confidence 0110 0 011468999999875 466655554
No 214
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.89 E-value=3.7e-21 Score=187.23 Aligned_cols=277 Identities=14% Similarity=0.081 Sum_probs=197.1
Q ss_pred CCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHH----HHHCCCeEEEecCCC
Q 014492 126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRKS 201 (423)
Q Consensus 126 Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~~ 201 (423)
+++|....|+++++++.|. +++++++|+++++..++.+++++||+|++++|.|...... .+..|+++..++..
T Consensus 47 ~gnPt~~~lE~~lA~l~g~--~~~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~- 123 (377)
T TIGR01324 47 RGTLTHFALQDAMCELEGG--AGCYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPL- 123 (377)
T ss_pred CCCccHHHHHHHHHHHhCC--CcEEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCC-
Confidence 4556678999999999984 5788999999999999999999999999999999765433 35578888877532
Q ss_pred CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEcc
Q 014492 202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRT 280 (423)
Q Consensus 202 ~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S 280 (423)
+.+++++.++ +++|+|++++|+||+|.+.+.+++.++|+. |+++|+|++|....... + ...+..+++.|
T Consensus 124 ----~~e~l~~~i~-~~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~g~~~~-p----l~~gaDivv~S 193 (377)
T TIGR01324 124 ----IGEDIATLIQ-PNTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAAGLLFK-P----LEHGVDISIQA 193 (377)
T ss_pred ----CHHHHHHhcC-CCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccC-c----cccCceEEEec
Confidence 2378888886 689999999999999999999999999987 99999999998543211 1 13456799999
Q ss_pred Chhhhccc-CccccccccCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCe
Q 014492 281 FSKRAGLA-GLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLN 357 (423)
Q Consensus 281 ~SK~~g~~-G~R~G~i~~~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 357 (423)
++|.++.. +...|+++++++.++++...... ..+++.....+...+ +.+..+.++..++..++.+.|++.+.+.
T Consensus 194 ~tK~l~G~~d~~gG~v~~~~~~~~~l~~~~~~~G~~l~p~~a~~~~rgl---~tl~~R~~~~~~~a~~la~~L~~~p~v~ 270 (377)
T TIGR01324 194 GTKYLVGHSDIMIGTVVANARTWDQLREHSYLMGQMVDADDAYTTLRGL---RTLGVRLKQHQESSLAIAKWLSEQPEVA 270 (377)
T ss_pred CceeccCCCCceEEEEEeCHHHHHHHHHHHHHhCCCCCHHHHHHHHhhh---hhHHHHHHHHHHHHHHHHHHHHhCCCcC
Confidence 99988633 36679999988887776643322 345565444444443 4456667777888888999998766442
Q ss_pred -e-cC----------------CCceEEEEEeCC-C-CCHHHHHHHHHhCCcEEEeCCC-------------------CCC
Q 014492 358 -P-YP----------------SYSNFILCEVTS-G-MDAKKLKDDLAKMGVMIRHYNN-------------------KEL 398 (423)
Q Consensus 358 -~-~p----------------~~~~~~~~~~~~-~-~~~~~l~~~L~~~gI~v~~~~~-------------------~~~ 398 (423)
+ +| +.+..+.+++.+ + .....|.+.|.-.++.+.-|+. ...
T Consensus 271 ~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~l~~~~~~~slG~~~sl~~~~~~~~~~~~~~~~~~~ 350 (377)
T TIGR01324 271 RVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLTQKQVHAFLDHLQLFGLGYSWGGYESLALCNQPELGHRPNIKRNLE 350 (377)
T ss_pred EEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhCCcceEeccCCCccceeecCCCCCCHHHHHhccCC
Confidence 2 23 224556677752 1 2345666766544444432222 012
Q ss_pred CCeEEEEecChhhHHHHHHHH
Q 014492 399 KGYVRVSVGKPEHTDALMECL 419 (423)
Q Consensus 399 ~~~iRis~~~~~~~~~l~~al 419 (423)
++.||||++.++ .++|.+-|
T Consensus 351 ~~liR~svGlE~-~~dl~~dl 370 (377)
T TIGR01324 351 GPLIRVHIGLEN-VDDLKADL 370 (377)
T ss_pred CCEEEEEeCCCC-HHHHHHHH
Confidence 357999999865 45564444
No 215
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.89 E-value=6.4e-21 Score=188.46 Aligned_cols=319 Identities=15% Similarity=0.192 Sum_probs=213.1
Q ss_pred CCCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-CCC----CCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492 91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (423)
Q Consensus 91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~----~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~ 162 (423)
..+++.++|+..+ .+.++ .+|++.+|+.+ +.. +..|..+...+|.+.++++.+ .+.++++++++++++.+
T Consensus 35 d~dG~~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v~~~~sGseA~e~A 112 (406)
T PRK12381 35 DQQGKEYIDFAGGIAVNALGHAHPALREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATF--ADRVFFCNSGAEANEAA 112 (406)
T ss_pred eCCCCEEEEcCcCHhhccCCCCCHHHHHHHHHHHhhcccccCccCCHHHHHHHHHHHhhCC--CCeEEEcCCcHHHHHHH
Confidence 3457789999775 23333 37888888876 221 122333345678888888875 36999999999999999
Q ss_pred HHHhc--------CCCCeEEEcCCCchhhHHHHHHCCCeEE-E---ecCC----CCCCCCHHHHHHHhhcCCceEEEEcC
Q 014492 163 MRCVL--------DPGDKIVDCPPTFTMYEFDAAVNGAAVV-K---VPRK----SDFSLNVELIADAVEREKPKCIFLTS 226 (423)
Q Consensus 163 ~~~l~--------~~gd~Vl~~~p~y~~~~~~~~~~g~~~~-~---v~~~----~~~~~d~~~l~~~i~~~~~~~i~l~~ 226 (423)
++... .....|+....+|+.....+...+.... . .|.. .....|++.+++.+. .++++|++ .
T Consensus 113 lk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~aavii-E 190 (406)
T PRK12381 113 LKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALID-DQTCAVIV-E 190 (406)
T ss_pred HHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhcc-CCeeEEEE-e
Confidence 98542 1346799999999866544333222110 0 0100 011347899999886 57888887 5
Q ss_pred CCCCcCcCC--CHHHHHHHHc---C-CCEEEEccCCccccCCCchhh--hhccCCcEEEEccChhhhcccCccccccccC
Q 014492 227 PNNPDGSII--NDEDLLKILE---M-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP 298 (423)
Q Consensus 227 p~NPtG~~~--~~~~l~~i~~---~-~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~ 298 (423)
|.|++|-++ +.+.+++|.+ . |+++|+||+|.++...+.... ..+..+. +.|+||.++ +|+|+||++++
T Consensus 191 Pv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~~~~~~~v~pD---i~t~sK~l~-gG~~ig~~~~~ 266 (406)
T PRK12381 191 PIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPD---VLTTAKALG-GGFPIGAMLTT 266 (406)
T ss_pred CCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchhhhHhhCCCCC---EEEehhhhh-CCCceEEEEEc
Confidence 889998654 5666666555 3 999999999987754433221 1111222 358999998 89999999999
Q ss_pred HHHHHHHHHhcC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC----CCeecCCCceEEEEEeCC
Q 014492 299 LSIIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP----FLNPYPSYSNFILCEVTS 372 (423)
Q Consensus 299 ~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~----~~~~~p~~~~~~~~~~~~ 372 (423)
+++++.+..... .|+.+++.+.++.++|+..+ ..+.+++++++.+++.+.|+++. .+......|.++++.+++
T Consensus 267 ~~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l~-~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~Gl~~~~~l~~ 345 (406)
T PRK12381 267 EKCASVMTVGTHGTTYGGNPLASAVAGKVLELIN-TPEMLNGVKQRHDWFVERLNTINARYGLFSEIRGLGLLIGCVLNA 345 (406)
T ss_pred HHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhhCCCEEEEecCeEEEEEEecC
Confidence 999988765332 36778999988888775321 23467778888888888887652 222234668888998864
Q ss_pred CC--CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 373 GM--DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 373 ~~--~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.. ....+.+.|.++||.+.+.+ ++.+||+++...+.+++++++++|
T Consensus 346 ~~~~~~~~~~~~l~~~Gv~v~~~g----~~~lRl~p~~~~t~~~i~~~~~~l 393 (406)
T PRK12381 346 EYAGKAKQISQEAAKAGVMVLIAG----PNVVRFAPALNISEEEITTGLDRF 393 (406)
T ss_pred chhhHHHHHHHHHHHCCcEEeeCC----CCEEEEeCCccCCHHHHHHHHHHH
Confidence 32 45778888999999997643 468999986433335555555544
No 216
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.89 E-value=1.1e-20 Score=184.91 Aligned_cols=268 Identities=17% Similarity=0.184 Sum_probs=189.3
Q ss_pred HHHHhc-CCCCCCCCCcc-hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCeEEEcCCCchhhHHHHHHC
Q 014492 114 REALGQ-LKFPYIYPDPE-SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVN 190 (423)
Q Consensus 114 ~~al~~-~~~~~~Y~~~g-~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~ 190 (423)
.+++.+ +..+..|+++. ..++++.+++++|. +++++++|+++++.+++..+ +++||+|+++.|+|..+...++..
T Consensus 14 ~~~~~~~l~~~~~~g~~~~~~~~e~~la~~~g~--~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~~~~~~~~~~ 91 (375)
T PRK11706 14 LDYIQQAMSSGKLCGDGGFTRRCQQWLEQRFGS--AKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAFVLR 91 (375)
T ss_pred HHHHHHHHHcCCccCCCHHHHHHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHc
Confidence 444444 23334455443 46788889999886 58999999999999887765 689999999999999999999999
Q ss_pred CCeEEEecCCC-CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCcccc-CCCchhh
Q 014492 191 GAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLESRME 267 (423)
Q Consensus 191 g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~-~~~~~~~ 267 (423)
|++++.++.++ ++.+|++++++.++ .++|+|+++ |++|...+.+++.++|+. |++||+|++|+.+. +.+....
T Consensus 92 G~~~v~~d~d~~~~~~d~~~le~~i~-~~tk~i~~~---~~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~~~~~~~~g 167 (375)
T PRK11706 92 GAKIVFVDIRPDTMNIDETLIEAAIT-PKTRAIVPV---HYAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYKGRALG 167 (375)
T ss_pred CCEEEEEecCCCcCCcCHHHHHHhcC-CCCeEEEEe---CCCCCccCHHHHHHHHHHcCCEEEEECccccccccCCeeee
Confidence 99999999764 46799999999997 589999976 469999999999999987 99999999998775 3332222
Q ss_pred hhccCCcEEEEccCh--hhhcccCccccccccCHHHHHHHHHhcCC-------------------CCCcHH-HHHHHHHH
Q 014492 268 WVKKHDNLIVLRTFS--KRAGLAGLRVGYGAFPLSIIEYLWRAKQP-------------------YNVSVA-AEVAACAA 325 (423)
Q Consensus 268 ~~~~~~~~i~i~S~S--K~~g~~G~R~G~i~~~~~~~~~l~~~~~~-------------------~~~~~~-~~~a~~~~ 325 (423)
.. . .+.+.||+ |.++ +|.+.+++..++++.+++...+.. ++.+.. ....+...
T Consensus 168 ~~---~-~~~~~Sf~~~K~l~-~g~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~ 242 (375)
T PRK11706 168 TI---G-HIGCFSFHETKNYT-AGEGGALLINDPALIERAEIIREKGTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYL 242 (375)
T ss_pred cC---c-CEEEEeCCCCcccc-ccCCeEEEECCHHHHHHHHHHHHcCCCcchhhccCCCcceeeecccccCcCHHHHHHH
Confidence 11 1 23444544 9986 588878888788888877655421 112211 11111112
Q ss_pred hCChHHHHHHHHHHHHHHHHHHHHHccCC---CCee--cCCC----ceEEEEEeCCCCCHHHHHHHHHhCCcEEEe
Q 014492 326 LQNPIYLEKVKEALIKERERLFKLLKDVP---FLNP--YPSY----SNFILCEVTSGMDAKKLKDDLAKMGVMIRH 392 (423)
Q Consensus 326 l~~~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~--~p~~----~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~ 392 (423)
+...+.+++..++-+++.+++.+.|++++ ++.. .+.+ ..++++.++++.+.+++.+.|.++||.++.
T Consensus 243 ~~ql~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~gI~~~~ 318 (375)
T PRK11706 243 WAQLEAADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLRDLEDRSALINFLKEAGIMAVF 318 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEECCcCCHHHHHHHHHHCCCCccc
Confidence 22223456666666777778888887764 2321 1222 235567777667899999999999998763
No 217
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.89 E-value=6e-21 Score=188.92 Aligned_cols=313 Identities=17% Similarity=0.117 Sum_probs=209.9
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhcC----CCC--CC-CC--Cc--chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQL----KFP--YI-YP--DP--ESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~----~~~--~~-Y~--~~--g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~ 163 (423)
.++++|+.+... +.++.+.+++.+. ... .. +. .. ...+.++.+ +++|+++++|++|+|++++++.++
T Consensus 26 ~~~iyld~~a~g-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~g~~~~~v~~~~~~t~~l~~~~ 103 (406)
T TIGR01814 26 NAVIYLDGNSLG-LMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLKL-RLVGAKEDEVVVMNTLTINLHLLL 103 (406)
T ss_pred CCcEEecCCCcC-cCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhccc-cccCCCCCcEEEeCCchHHHHHHH
Confidence 457999976644 3467777777542 110 11 11 11 122333335 789999999999999999999999
Q ss_pred HHhcCCC---CeEEEcCCCchh--h--HHHHHHCCCeE----EEecCCCCCCCCHHHHHHHhh--cCCceEEEEcCCCCC
Q 014492 164 RCVLDPG---DKIVDCPPTFTM--Y--EFDAAVNGAAV----VKVPRKSDFSLNVELIADAVE--REKPKCIFLTSPNNP 230 (423)
Q Consensus 164 ~~l~~~g---d~Vl~~~p~y~~--~--~~~~~~~g~~~----~~v~~~~~~~~d~~~l~~~i~--~~~~~~i~l~~p~NP 230 (423)
..+++++ +.|++....|+. + ...++..|+++ +.++.+.++.+|++++++.+. .+++++|++++++|.
T Consensus 104 ~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~t~lv~~~~v~~~ 183 (406)
T TIGR01814 104 ASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEETLRLEDILDTIEKNGDDIAVILLSGVQYY 183 (406)
T ss_pred HHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCCccCHHHHHHHHHhcCCCeEEEEEeccccc
Confidence 9887664 368888889975 2 23455678887 566655556789999988874 267999999999999
Q ss_pred cCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhh-cccCccccccccCHHHHHHHHHh
Q 014492 231 DGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYLWRA 308 (423)
Q Consensus 231 tG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~-g~~G~R~G~i~~~~~~~~~l~~~ 308 (423)
||.++|.+++.++|+. |+++++|++++.... . ..+...+-.+++.|.+|.+ |.+| .| ++..++....+...
T Consensus 184 tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~---~-id~~~~gvD~~~~s~hK~l~g~pG--~~-l~v~~~~~~~~~p~ 256 (406)
T TIGR01814 184 TGQLFDMAAITRAAHAKGALVGFDLAHAVGNV---P-LDLHDWGVDFACWCTYKYLNAGPG--AG-AFVHEKHAHTERPR 256 (406)
T ss_pred cceecCHHHHHHHHHHcCCEEEEEcccccCCc---c-cccccCCCCEEEEcCccccCCCCC--eE-EEEehhhhhhcCCC
Confidence 9999999999999997 999999999985332 1 1122345568999999965 3345 33 33322222222110
Q ss_pred c-------------------------CCCCCcHHHHHHHHHHhCCh--HHHHHHHHHHHHHHHHHHHHHccCC----CCe
Q 014492 309 K-------------------------QPYNVSVAAEVAACAALQNP--IYLEKVKEALIKERERLFKLLKDVP----FLN 357 (423)
Q Consensus 309 ~-------------------------~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~----~~~ 357 (423)
. ...+++..+..++.++++.. ..+++.+++.+++.+++.+.|+++. .+.
T Consensus 257 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~ 336 (406)
T TIGR01814 257 LAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEELIKARCGGPPVLT 336 (406)
T ss_pred CCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceE
Confidence 0 01235666666666666532 2257778888899999999887642 243
Q ss_pred ec-CC----CceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEe-c---ChhhHHHHHHHHhhh
Q 014492 358 PY-PS----YSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSV-G---KPEHTDALMECLMHL 422 (423)
Q Consensus 358 ~~-p~----~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~-~---~~~~~~~l~~al~~l 422 (423)
+. |. .+..+.+.++ .+..++.+.|.++||.+.... ++.||||+ . +.++.+++.++|+.+
T Consensus 337 i~~~~~~~~r~~~v~~~~~--~~~~~~~~~L~~~gi~v~~~~----~~~iRiS~~~~~nt~~did~l~~~l~~~ 404 (406)
T TIGR01814 337 IITPRDHAQRGCQLSLTHP--VPGKAVFQALIKRGVIGDKRE----PSVIRVAPVPLYNTFVDVYDAVNVLEEI 404 (406)
T ss_pred EeCCCChhhcCCeEEEEec--CCHHHHHHHHHHCCEEEeccC----CCeEEEechhccCCHHHHHHHHHHHHHH
Confidence 32 21 2446667776 467889999999999886432 46999998 3 556677777777653
No 218
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.89 E-value=8.5e-21 Score=185.04 Aligned_cols=268 Identities=17% Similarity=0.190 Sum_probs=186.5
Q ss_pred HHHHHHHhcC-CCCCCCC-CcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCeEEEcCCCchhhHHHH
Q 014492 111 PEVREALGQL-KFPYIYP-DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDA 187 (423)
Q Consensus 111 ~~v~~al~~~-~~~~~Y~-~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~ 187 (423)
++..+++.+. ..+..++ .+-..++++.+++++|. +++++|+|+++++.+++.++ ++|||+|++++++|..+...+
T Consensus 11 ~~e~~a~~~~~~~~~~~~~g~~~~~~e~~la~~~g~--~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t~~~~~~~~ 88 (376)
T TIGR02379 11 GQELEYIAEAISEGKLSGDGPFSRRCETWLENRTGT--KKALLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAF 88 (376)
T ss_pred HHHHHHHHHHHHcCCccCCcHHHHHHHHHHHHHhCC--CeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHH
Confidence 4445666553 2222332 22357889999999885 57999999999999999887 799999999999999988888
Q ss_pred HHCCCeEEEecCCC-CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCcccc-CCCc
Q 014492 188 AVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLES 264 (423)
Q Consensus 188 ~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~-~~~~ 264 (423)
...|++++.++.+. ++.+|++++++.++ .++|+|+ |+||+|...+.+++.++|+. |++||+|++|+.+. +.+.
T Consensus 89 ~~~G~~~v~vd~d~~~~~~d~~~le~~i~-~~tk~Ii---p~~~~G~~~d~~~I~~la~~~~i~vIeDaa~~~g~~~~~~ 164 (376)
T TIGR02379 89 VLRGAKIVFVDIRPDTMNIDETLIESAIT-HRTKAIV---PVHYAGVACDMDTIMALANKHQLFVIEDAAQGVMSTYKGR 164 (376)
T ss_pred HHcCCEEEEEecCCCcCCCCHHHHHHhcC-cCceEEE---EeCCCCCccCHHHHHHHHHHCCCEEEEECccccCCccCCc
Confidence 89999999999764 47899999999997 6899987 67789999999999999997 99999999998765 3332
Q ss_pred hhhhhccCCcEEEEccC--hhhhcccCccccccccC-HHHHHHHHHhcCC-----------------------CCCcHHH
Q 014492 265 RMEWVKKHDNLIVLRTF--SKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP-----------------------YNVSVAA 318 (423)
Q Consensus 265 ~~~~~~~~~~~i~i~S~--SK~~g~~G~R~G~i~~~-~~~~~~l~~~~~~-----------------------~~~~~~~ 318 (423)
...... .+.+.|| +|.+. +|.+.|+++.+ +++.++++..+.. +.++.+.
T Consensus 165 ~~g~~~----~~~~fSf~~~K~l~-~g~~gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~n~~~~~~~ 239 (376)
T TIGR02379 165 ALGSIG----HLGTFSFHETKNYT-SGGEGGALLINDQAFIERAEIIREKGTNRSQFFRGEVDKYTWRDIGSSYLPSELQ 239 (376)
T ss_pred ccCCCC----CEEEEeCCCCCcCc-ccCCceEEEECCHHHHHHHHHHHHhCCCCccccccCCCcceeeeecccCCccHHH
Confidence 222111 1333333 37775 67788998875 7788877754321 1122233
Q ss_pred HHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC---CCee--cCCCc----eEEEEEeCCCCCHHHHHHHHHhCCcE
Q 014492 319 EVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP---FLNP--YPSYS----NFILCEVTSGMDAKKLKDDLAKMGVM 389 (423)
Q Consensus 319 ~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~--~p~~~----~~~~~~~~~~~~~~~l~~~L~~~gI~ 389 (423)
.+.+...| +.+++..++-+++.++..+.|.++. .... .+.+. .+.++.++++.+.+++.+.|.++||.
T Consensus 240 Aa~g~~qL---~~l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~r~~l~~~L~~~gI~ 316 (376)
T TIGR02379 240 AAYLWAQL---EQADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHMFYIKLKDEDDRNELIKYLKEQEIM 316 (376)
T ss_pred HHHHHHHH---HHhHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEEEEEEECCcCCHHHHHHHHHHCCCC
Confidence 22222323 4455555555566666667766543 1111 12221 23356776555789999999999998
Q ss_pred EEe
Q 014492 390 IRH 392 (423)
Q Consensus 390 v~~ 392 (423)
++.
T Consensus 317 ~~~ 319 (376)
T TIGR02379 317 AVF 319 (376)
T ss_pred ccc
Confidence 873
No 219
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.89 E-value=2e-20 Score=183.67 Aligned_cols=278 Identities=15% Similarity=0.159 Sum_probs=193.8
Q ss_pred CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHH----HHHCCCeEEEecCCCC
Q 014492 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRKSD 202 (423)
Q Consensus 127 ~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~~~ 202 (423)
.++....|++.++++.|. +..+.+++++.|+.+++.+++++||+|+++.++|...... +...|+++..+..
T Consensus 59 ~nPtv~~lE~~la~leg~--~~av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~--- 133 (432)
T PRK06702 59 GNPTLAAFEQKLAELEGG--VGAVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNP--- 133 (432)
T ss_pred CCcHHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECC---
Confidence 356678999999999985 3578899999999999999999999999999999744443 5778999999853
Q ss_pred CCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccC
Q 014492 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF 281 (423)
Q Consensus 203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~ 281 (423)
.+|+++++++++ +++|+|++++|+||++.+.+.+++.++|+. |+++|+|++|.. +..... -.++..|++.|+
T Consensus 134 -~~d~~~l~~~I~-~~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~t----P~~~~p-l~~GADIvv~S~ 206 (432)
T PRK06702 134 -NLTADEIVALAN-DKTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLAT----PYLCQA-FEHGANIIVHST 206 (432)
T ss_pred -CCCHHHHHHhCC-cCCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCc----hhhCCh-hhcCCCEEEEcc
Confidence 578999999997 789999999999999999999999999997 999999999851 111111 134455999999
Q ss_pred hh-----hhcccCccc-----cccccC-HHHH---------------------HHHH--Hh-cCCCCCcHHHHHHHHHHh
Q 014492 282 SK-----RAGLAGLRV-----GYGAFP-LSII---------------------EYLW--RA-KQPYNVSVAAEVAACAAL 326 (423)
Q Consensus 282 SK-----~~g~~G~R~-----G~i~~~-~~~~---------------------~~l~--~~-~~~~~~~~~~~~a~~~~l 326 (423)
|| +.+++|.++ +|...+ ++++ .+.. .. .....++++....+...|
T Consensus 207 TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~sp~~a~l~~rgL 286 (432)
T PRK06702 207 TKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGNCMSPFNAYISNIGL 286 (432)
T ss_pred ccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHHHHHHHHHccCCCCHHHHHHHHhcc
Confidence 99 777788776 555432 1111 1111 11 112467788777777777
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHccCCCCe--ecC-----------------CCceEEEEEeCCC-CCHHHHHHHHHhC
Q 014492 327 QNPIYLEKVKEALIKERERLFKLLKDVPFLN--PYP-----------------SYSNFILCEVTSG-MDAKKLKDDLAKM 386 (423)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~--~~p-----------------~~~~~~~~~~~~~-~~~~~l~~~L~~~ 386 (423)
+. ++.+.++..++...+.+.|++.+.+. .+| +.|..+.+.+.++ .....|++.|.=-
T Consensus 287 ~T---l~lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~~~p~~~l~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~ 363 (432)
T PRK06702 287 ET---LHLRMERHSENALAVAKWLADHERIEWVNYPGLDSNENYSLAQKYLKKGASGVLTFGIKGGLEAAKEFIANVKLA 363 (432)
T ss_pred Cc---HHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHhCccc
Confidence 54 55566666789999999998876543 233 1245677787532 2234555555311
Q ss_pred CcEEE----------eCCC-------------CCCCCeEEEEecChhhHHHHHHHHh
Q 014492 387 GVMIR----------HYNN-------------KELKGYVRVSVGKPEHTDALMECLM 420 (423)
Q Consensus 387 gI~v~----------~~~~-------------~~~~~~iRis~~~~~~~~~l~~al~ 420 (423)
.+.+. |... .-.++.||||++.++ .|+|.+-|+
T Consensus 364 ~~a~slGg~~Slv~~p~~~th~~~~~~~~~~~Gi~~~liRlSvGlEd-~eDLi~Dl~ 419 (432)
T PRK06702 364 TLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVTSDLIRLSVGIED-VSDIIADLE 419 (432)
T ss_pred eeccccCCCCcceECCCCCCcccCCHHHHHhcCCCCCeEEEEeccCC-HHHHHHHHH
Confidence 22221 1110 011468999999865 466665554
No 220
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.89 E-value=5.6e-21 Score=186.36 Aligned_cols=279 Identities=20% Similarity=0.235 Sum_probs=190.5
Q ss_pred CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCch-hhHH---HHHHCCCeEEEecC
Q 014492 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT-MYEF---DAAVNGAAVVKVPR 199 (423)
Q Consensus 124 ~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~-~~~~---~~~~~g~~~~~v~~ 199 (423)
.+|+++...+|++.++++.|.+ ..+++++|. .++..++ .++++||+|+++.|.|. .|.. .++..|++++.++.
T Consensus 45 ~r~~~p~~~~Le~~lA~l~g~~-~~~~~~sG~-aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~ 121 (377)
T PRK07671 45 SRTGNPTRAALEELIAVLEGGH-AGFAFGSGM-AAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDT 121 (377)
T ss_pred CCCCChHHHHHHHHHHHHhCCC-ceEEeCCHH-HHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECC
Confidence 4567777899999999999964 457766665 5777666 47899999999999997 4443 33457999999873
Q ss_pred CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEE
Q 014492 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (423)
Q Consensus 200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i 278 (423)
.|+++++++++ +++++|++++|+||||.+.+.+++.++++. |+++|+|++|...... .+. ..+..+++
T Consensus 122 -----~d~~~l~~ai~-~~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~~~~~-~p~----~~g~Divv 190 (377)
T PRK07671 122 -----SNLEEVEEAIR-PNTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMTPYWQ-SPI----SLGADIVL 190 (377)
T ss_pred -----CCHHHHHHhcC-CCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCccccC-Chh----hhCCeEEE
Confidence 38999999997 689999999999999999999999999987 9999999999754332 122 23446999
Q ss_pred ccChhhhcccC-cccccccc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC
Q 014492 279 RTFSKRAGLAG-LRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP 354 (423)
Q Consensus 279 ~S~SK~~g~~G-~R~G~i~~-~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 354 (423)
.|+||.++.++ .-.|+++. ++++++++...+.. ..+++.....+ +...+.+..+.++..++..++.+.|++.+
T Consensus 191 ~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~~~~g~~~~~~~a~l~---~~~l~tl~~R~~~~~~na~~la~~L~~~~ 267 (377)
T PRK07671 191 HSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQNSTGGILGPQDSWLL---LRGLKTLGIRMEEHETNSRAIAEFLNNHP 267 (377)
T ss_pred ecCcccccCCccceeEEEEeCcHHHHHHHHHHHHhhcCCCCHHHHHHH---HcCcChHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999987443 23465555 56788877765544 23455444433 33334466677788899999999998876
Q ss_pred CCe-e-cC----------------CCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC---------------------
Q 014492 355 FLN-P-YP----------------SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN--------------------- 395 (423)
Q Consensus 355 ~~~-~-~p----------------~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~--------------------- 395 (423)
.+. + +| +.|..+.+++.+......|++.|.=-.+.+.-|+.
T Consensus 268 ~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~f~~~l~l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~ 347 (377)
T PRK07671 268 AVNKVYYPGLPSHPNHELAKEQANGFGGMISFDVGSEETANKVLERLQYFTLAESLGAVESLISIPSQMTHASIPADRRK 347 (377)
T ss_pred CeeEEECCCCCCCccHHHHHhhCCCCCceEEEEeCCHHHHHHHHHhCCcceEccCCCCCCeEeECCCccccccCCHHHHH
Confidence 442 1 22 12456667773212234444444311111111110
Q ss_pred --CCCCCeEEEEecChhhHHHHHHHHh
Q 014492 396 --KELKGYVRVSVGKPEHTDALMECLM 420 (423)
Q Consensus 396 --~~~~~~iRis~~~~~~~~~l~~al~ 420 (423)
.-.++.||||++.++ .++|.+-|+
T Consensus 348 ~~gi~~~liR~svGlE~-~~dl~~dl~ 373 (377)
T PRK07671 348 ELGITDGLIRISVGIED-GEDLIEDLA 373 (377)
T ss_pred hcCCCCCeEEEEeccCC-HHHHHHHHH
Confidence 012468999999876 466766554
No 221
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.89 E-value=1.5e-20 Score=188.93 Aligned_cols=316 Identities=18% Similarity=0.189 Sum_probs=213.1
Q ss_pred cCCCCCCCCCCHHHHHHHhcCC-C--CCCC-CC---cch----HHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH--HH-H
Q 014492 100 IDANENPYGPPPEVREALGQLK-F--PYIY-PD---PES----RRLRAALAKDSGLESDHILVGCGADELIDLI--MR-C 165 (423)
Q Consensus 100 l~~~~~~~~~~~~v~~al~~~~-~--~~~Y-~~---~g~----~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~--~~-~ 165 (423)
++.|+..+..+|.+.+++.+.. . .+.| |. .|. .++++.+++++|++...+..++|+++.+..+ ++ .
T Consensus 73 ~g~G~~~~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~~~~l~~~~GA~a~~~~l~~~r~~ 152 (481)
T PRK04366 73 YPLGSCTMKYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGMDAVTLQPAAGAHGELTGLLMIRAY 152 (481)
T ss_pred ecCcccCCCCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCCceEEEeCcHHHHHHHHHHHHHHH
Confidence 5566677777888888887641 1 1445 22 233 3566777777898755666677777665533 32 3
Q ss_pred hcCCCC----eEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcC-CCHHHH
Q 014492 166 VLDPGD----KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI-INDEDL 240 (423)
Q Consensus 166 l~~~gd----~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~-~~~~~l 240 (423)
+.++|| +|+++.|.|+.+...++..|++++.+|.+.++.+|++++++.+. .++++|++++|| |||.+ .+.+++
T Consensus 153 ~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~~~~~~D~e~L~~~i~-~~t~~V~v~~Pn-~tG~~~~dl~eI 230 (481)
T PRK04366 153 HEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSNEDGLVDLEALKAAVG-EDTAALMLTNPN-TLGLFERNILEI 230 (481)
T ss_pred hhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeecCCCCCcCHHHHHhhcc-cCCeEEEEeCCC-CccccchHHHHH
Confidence 456776 99999999999999999999999999987778999999999996 689999999998 99976 467888
Q ss_pred HHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhccc----CccccccccCHHHHHHHHHh-------
Q 014492 241 LKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLA----GLRVGYGAFPLSIIEYLWRA------- 308 (423)
Q Consensus 241 ~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~----G~R~G~i~~~~~~~~~l~~~------- 308 (423)
.++++. |+++++|+++.....+.. .....+..+++++.+|.+|.| |-.+|++.+.+++.+.+...
T Consensus 231 ~~~a~~~gal~iVD~a~~~~~~g~~---~~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~~v~~~g~ 307 (481)
T PRK04366 231 AEIVHEAGGLLYYDGANLNAILGKA---RPGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPFLPVPVVEKDGD 307 (481)
T ss_pred HHHHHHcCCEEEEEecChhhhcccC---CccccCCCEEEEechhhcCCCCCCCCCCeeeeeehhhhHhhCCCCeeeccCC
Confidence 888876 999999999853211111 122345578999999987644 34578888777766654200
Q ss_pred --------------cCCCCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceE--EEEEe
Q 014492 309 --------------KQPYNVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNF--ILCEV 370 (423)
Q Consensus 309 --------------~~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~--~~~~~ 370 (423)
...++.+.....++..++.. .+.+++..++..++.+++.+.|+++..+ ..+ ...+ ..++.
T Consensus 308 ~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~~~~-~~~-~~~~~~~~~~~ 385 (481)
T PRK04366 308 RYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDIYDL-PYD-RPCMHEFVLSG 385 (481)
T ss_pred ceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhCcc-cCC-CCeeEEEEEEC
Confidence 00112223333444444432 3456677777788899999999886212 222 1111 22332
Q ss_pred C----CCCCHHHHHHHHHhCCcEEEeCCCC-CCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492 371 T----SGMDAKKLKDDLAKMGVMIRHYNNK-ELKGYVRVSVG---KPEHTDALMECLMHL 422 (423)
Q Consensus 371 ~----~~~~~~~l~~~L~~~gI~v~~~~~~-~~~~~iRis~~---~~~~~~~l~~al~~l 422 (423)
+ .+.+..++.+.|.++||.+.....+ ...+++|++++ +.+++|+|.++|+++
T Consensus 386 ~~~~~~g~~~~~v~~~L~~~Gi~~~~~~~p~~~~~~l~is~~e~~t~edid~l~~~l~~i 445 (481)
T PRK04366 386 KKLKETGVRTLDIAKRLLDYGFHPPTIYFPLIVPEALMIEPTETESKETLDAFIAAMKQI 445 (481)
T ss_pred ccccccCCCHHHHHHHHHHCCccCCccccccccCCeEEEcccCCCCHHHHHHHHHHHHHH
Confidence 2 1457899999999999987633222 23679999986 466778888877654
No 222
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.89 E-value=7e-21 Score=186.35 Aligned_cols=267 Identities=20% Similarity=0.242 Sum_probs=188.8
Q ss_pred HHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCeEEEcCCCchhhHHHHH
Q 014492 111 PEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAA 188 (423)
Q Consensus 111 ~~v~~al~~-~~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~ 188 (423)
++..+++.+ +..+..|+.+...+|++++++++|.+ ++++++|+++++.+++.++ +++||+|++++|+|..+...+.
T Consensus 14 ~~e~~~~~~~l~~~~~~~g~~~~~le~~la~~~g~~--~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~~~~~~~~~ 91 (379)
T PRK11658 14 DEELAAVKEVLRSGWITTGPKNQALEQAFCQLTGNQ--HAIAVSSATAGMHITLMALGIGPGDEVITPSLTWVSTLNMIV 91 (379)
T ss_pred HHHHHHHHHHHHcCCccCCHhHHHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHcCCCCCCEEEECCCcHHHHHHHHH
Confidence 333455544 22333345667889999999999974 6788899999999999998 7999999999999999888888
Q ss_pred HCCCeEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCcccc-CCCch
Q 014492 189 VNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLESR 265 (423)
Q Consensus 189 ~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~-~~~~~ 265 (423)
..|++++.++.+ +++.+|++++++.+. +++|+|+ |+|++|...+.+++.++|+. |++||+|++|+... +.+..
T Consensus 92 ~~G~~~v~vd~~~~~~~~d~~~l~~~i~-~~tkav~---~~~~~G~~~d~~~i~~~a~~~gi~vi~D~a~a~g~~~~~~~ 167 (379)
T PRK11658 92 LLGATPVMVDVDRDTLMVTPEAIEAAIT-PRTKAII---PVHYAGAPADLDAIRAIGERYGIPVIEDAAHAVGTYYKGRH 167 (379)
T ss_pred HcCCEEEEEecCCCcCCcCHHHHHHhcc-cCCeEEE---EeCCCCCcCCHHHHHHHHHHcCCeEEEECCCccCCeECCee
Confidence 999999999975 456789999999997 6899887 66779999999999999987 99999999998533 22211
Q ss_pred hhhhccCCcEEEEccChhhhcccCccccccccC-HHHHHHHHHhcCC--------------------------CCCcHHH
Q 014492 266 MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP--------------------------YNVSVAA 318 (423)
Q Consensus 266 ~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~-~~~~~~l~~~~~~--------------------------~~~~~~~ 318 (423)
+...+. .+.||++...+++.+.|+++.+ +++.++++..... +.++.+
T Consensus 168 ---~g~~g~--~~~Sf~~~K~l~~g~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~G~n~~~~~l- 241 (379)
T PRK11658 168 ---IGARGT--AIFSFHAIKNITCAEGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAEVLTPGYKYNLADI- 241 (379)
T ss_pred ---cCCCCC--EEEeCCCCCcCcccCceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCcceeeccccccCcCHH-
Confidence 122222 3455654444566678888874 7777777653311 011111
Q ss_pred HHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCC----ceEE-EEEeCC---CCCHHHHHHHHHhCCcE
Q 014492 319 EVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSY----SNFI-LCEVTS---GMDAKKLKDDLAKMGVM 389 (423)
Q Consensus 319 ~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~----~~~~-~~~~~~---~~~~~~l~~~L~~~gI~ 389 (423)
.|+.... ..+.+++..++-+++.+++.+.|+++++..+ .|.. .+++ .+.++. +.+.+++.+.|.++||.
T Consensus 242 -~AAl~~~-ql~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~gI~ 319 (379)
T PRK11658 242 -NAAIALV-QLAKLEALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFIIRVDEERCGISRDALMEALKERGIG 319 (379)
T ss_pred -HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEEEEECCccccCCHHHHHHHHHHCCCC
Confidence 2222222 2245677777778888888899988765432 2221 2233 244432 45789999999999998
Q ss_pred EE
Q 014492 390 IR 391 (423)
Q Consensus 390 v~ 391 (423)
++
T Consensus 320 ~~ 321 (379)
T PRK11658 320 TG 321 (379)
T ss_pred Cc
Confidence 76
No 223
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.89 E-value=5.1e-20 Score=174.88 Aligned_cols=309 Identities=19% Similarity=0.172 Sum_probs=235.4
Q ss_pred CCCCCCHHHHHHHhcCCCCCCCCCcc--hHHHHHHHHHHhCCCC-CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCch
Q 014492 105 NPYGPPPEVREALGQLKFPYIYPDPE--SRRLRAALAKDSGLES-DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT 181 (423)
Q Consensus 105 ~~~~~~~~v~~al~~~~~~~~Y~~~g--~~~lr~~ia~~~g~~~-~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~ 181 (423)
.|...+++|++++..-..+++-|+.. ..++.+.+...++.+. +-++++.+++.+++.++..+++|||+|++..-...
T Consensus 12 GP~~v~~~V~~am~~~~~~h~s~~F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~~nG~F 91 (383)
T COG0075 12 GPVPVPPRVLLAMARPMVGHRSPDFVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLVEPGDKVLVVVNGKF 91 (383)
T ss_pred CCCCCCHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCChH
Confidence 45566899999998744435556652 5788888889999764 56677888899999999999999999987666553
Q ss_pred --hhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhh-cCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCc
Q 014492 182 --MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE-REKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYT 257 (423)
Q Consensus 182 --~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~ 257 (423)
.+...++.+|++++.+..+.+..+|++++++.++ +++.++|.++|.-.+||+..|.++|.++++. |.++|+|.+=+
T Consensus 92 G~R~~~ia~~~g~~v~~~~~~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~l~iVDaVsS 171 (383)
T COG0075 92 GERFAEIAERYGAEVVVLEVEWGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNPLKEIAKAAKEHGALLIVDAVSS 171 (383)
T ss_pred HHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCcHHHHHHHHHHcCCEEEEEeccc
Confidence 6778899999999999988888899999999998 3578899999999999999999999999998 99999999876
Q ss_pred cccCCCchhhhhccCCcEEEEccChhhhcc-cCccccccccCHHHHHHHHHh--------------------cCCCCCcH
Q 014492 258 EFSGLESRMEWVKKHDNLIVLRTFSKRAGL-AGLRVGYGAFPLSIIEYLWRA--------------------KQPYNVSV 316 (423)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~-~G~R~G~i~~~~~~~~~l~~~--------------------~~~~~~~~ 316 (423)
.... ...+++++-++++.+-.|+++. || +|++..+++..+++... ..+++++.
T Consensus 172 ~Gg~----~~~vd~wgiDv~itgSQK~l~~PPG--la~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tppv 245 (383)
T COG0075 172 LGGE----PLKVDEWGIDVAITGSQKALGAPPG--LAFVAVSERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPYTPPV 245 (383)
T ss_pred CCCc----ccchhhcCccEEEecCchhccCCCc--cceeEECHHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCCCCCH
Confidence 3321 1223456777888888999875 35 57788887777665422 22356777
Q ss_pred HHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCC---c-eEEEEEeCCCCCHHHHHHHHH-hCCcE
Q 014492 317 AAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSY---S-NFILCEVTSGMDAKKLKDDLA-KMGVM 389 (423)
Q Consensus 317 ~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~---~-~~~~~~~~~~~~~~~l~~~L~-~~gI~ 389 (423)
....++..+|+. .+.++.+.++++++.+++++.++++++-. .... . ....+.+|++.+.+++...++ ++|+.
T Consensus 246 ~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alGl~~-~~~~~~~s~tvta~~~P~g~~~~~~~~~~~~~~g~~ 324 (383)
T COG0075 246 NLIYALREALDLILEEGLEARIARHRRLAEALRAGLEALGLEL-FADPERRSPTVTAIKVPEGVDDKKVRRALLKEYGVE 324 (383)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCcc-ccCcccCCCceEEEECCCCCCcHHHHHHHHHhCCEE
Confidence 788888888875 45689999999999999999999987533 2222 2 345578888888766666666 67988
Q ss_pred EEeCCCCCCCCeEEEEecChhhHHHHHHHHh
Q 014492 390 IRHYNNKELKGYVRVSVGKPEHTDALMECLM 420 (423)
Q Consensus 390 v~~~~~~~~~~~iRis~~~~~~~~~l~~al~ 420 (423)
+.++..+.....+||+....-..+++..++.
T Consensus 325 i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ 355 (383)
T COG0075 325 IAGGQGPLKGKIFRIGHMGNVRPEDVLAALA 355 (383)
T ss_pred ecccccccCccEEEEecCccCCHHHHHHHHH
Confidence 8887766667899999643333344444443
No 224
>PLN00144 acetylornithine transaminase
Probab=99.88 E-value=3e-20 Score=181.83 Aligned_cols=316 Identities=16% Similarity=0.145 Sum_probs=207.5
Q ss_pred CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCC---C-CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF---P-YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (423)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~---~-~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~ 162 (423)
..+++.++|+..+. ..++ .+|++.+++.+ +.. . ..|......++-+.+++..+ .+.++++++++++++.+
T Consensus 11 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v~f~~sGseA~e~A 88 (382)
T PLN00144 11 DVEGKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLAHVSNVYHTIPQVELAKRLVASSF--ADRVFFCNSGTEANEAA 88 (382)
T ss_pred eCCCCEEEECCcCHHhccCCCCCHHHHHHHHHHHHhcCCccccccCHHHHHHHHHHHhcCC--CCeEEEeCCcHHHHHHH
Confidence 34577899997763 3343 46888888876 221 1 11233334567777776654 46899999999999999
Q ss_pred HHHhc---CC------------CCeEEEcCCCchhhHHHHHHCCCe-------------EEEecCCCCCCCCHHHHHHHh
Q 014492 163 MRCVL---DP------------GDKIVDCPPTFTMYEFDAAVNGAA-------------VVKVPRKSDFSLNVELIADAV 214 (423)
Q Consensus 163 ~~~l~---~~------------gd~Vl~~~p~y~~~~~~~~~~g~~-------------~~~v~~~~~~~~d~~~l~~~i 214 (423)
++... .. ..+|+....+|++....+...... +..+| ..|++.+++.+
T Consensus 89 lklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~~ 163 (382)
T PLN00144 89 IKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVE-----YGNLEAARKLI 163 (382)
T ss_pred HHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeC-----CCCHHHHHHhc
Confidence 88432 10 246888888887655443332111 11222 12789999988
Q ss_pred hcCCceEEEEcCCCCCcCcCC-C---HHHHHHHHcC-CCEEEEccCCccccCCCchhh--hhccCCcEEEEccChhhhcc
Q 014492 215 EREKPKCIFLTSPNNPDGSII-N---DEDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGL 287 (423)
Q Consensus 215 ~~~~~~~i~l~~p~NPtG~~~-~---~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~g~ 287 (423)
...++++|++...+||.|... + .+++.++|+. |+++|+||+|..|...+.... .....+. +.||||.++
T Consensus 164 ~~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PD---i~t~sK~l~- 239 (382)
T PLN00144 164 QKGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPD---IMTLAKPLA- 239 (382)
T ss_pred CCCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCC---EEEeccccc-
Confidence 656788999886689954433 2 3345555665 999999999998865443221 1122222 678899998
Q ss_pred cCccccccccCHHHHHHHHHh--cCCCCCcHHHHHHHHHHh---CChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCC
Q 014492 288 AGLRVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAAL---QNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSY 362 (423)
Q Consensus 288 ~G~R~G~i~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~l---~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~ 362 (423)
+|+|+|++++++++.+.+... ...|+.+++++.++.+.| +++++.+...+.-+..++.+.+.+.+.+.+......
T Consensus 240 ~G~pig~v~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~vrg~ 319 (382)
T PLN00144 240 GGLPIGAVLVTEKVASAINPGDHGSTFAGGPLVCNAALAVLDKISKPGFLASVAKKGEYLRELLRRKLGGNPHVKEVRGV 319 (382)
T ss_pred CCcceEEEEEcHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhhCCCceeeecC
Confidence 899999999999998887532 234778899988888444 444444444443334455555556556544333358
Q ss_pred ceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 363 SNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 363 ~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
|.++|+++. .+...+++.+.++||.+.++.. .+.|||+++...+.+++.++++.|
T Consensus 320 G~~~~l~l~--~~~~~~~~~~~~~Gv~i~~~~~---~~~lrl~p~~~~~~~~i~~~~~~l 374 (382)
T PLN00144 320 GLLVGIQLD--VPAGPLVDACRDSGLLVLTAGK---GDVVRLVPPLVISEAELEQAVEIL 374 (382)
T ss_pred ceEEEEEec--CccHHHHHHHHHCCeEEeecCC---CCEEEEeCCCccCHHHHHHHHHHH
Confidence 999999983 3467899999999999988642 489999988633346666666654
No 225
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.88 E-value=1.7e-20 Score=185.46 Aligned_cols=316 Identities=15% Similarity=0.114 Sum_probs=211.1
Q ss_pred CCCCCeeEcCCCCCCCC---CCHHHHHHHhcC-C-CCCC---CCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492 92 RKPEDIVKIDANENPYG---PPPEVREALGQL-K-FPYI---YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (423)
Q Consensus 92 ~~~~~~i~l~~~~~~~~---~~~~v~~al~~~-~-~~~~---Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~ 163 (423)
..++.++|+.++..... .+|++.+++.+. . ..+. +..+...++.+.++++++. +.+++++++++++..++
T Consensus 34 ~~g~~~lD~~s~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~~~~SGs~A~e~ai 111 (401)
T TIGR01885 34 VEGKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLTLSSRAFYNDVFGEFAEYVTKLFGY--DKVLPMNTGAEAVETAI 111 (401)
T ss_pred CCCCEEEEcccCHhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhcCC--CEEEEeCccHHHHHHHH
Confidence 35677899988644333 378999888762 2 2211 2233467899999999874 58899999999999999
Q ss_pred HHhc---------CC-CCeEEEcCCCchhh-HHHHHHCC------------CeEEEecCCCCCCCCHHHHHHHhhc--CC
Q 014492 164 RCVL---------DP-GDKIVDCPPTFTMY-EFDAAVNG------------AAVVKVPRKSDFSLNVELIADAVER--EK 218 (423)
Q Consensus 164 ~~l~---------~~-gd~Vl~~~p~y~~~-~~~~~~~g------------~~~~~v~~~~~~~~d~~~l~~~i~~--~~ 218 (423)
+... .+ .+.|+...-+|+.. .......| ..++.+| ..|++++++.+++ .+
T Consensus 112 ~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~le~~l~~~~~~ 186 (401)
T TIGR01885 112 KLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIP-----YNNLEALEEALEDHGPN 186 (401)
T ss_pred HHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeC-----CCCHHHHHHHHHhcCCC
Confidence 8642 12 36778888888643 22222222 1223333 1268899888853 45
Q ss_pred ceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCchhh--hhccCCcEEEEccChhhhcccCcc
Q 014492 219 PKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLR 291 (423)
Q Consensus 219 ~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~g~~G~R 291 (423)
+.+|+++.+++++|.+.+ .+++.++|+. |+++|+||+|..+...+.... .....+.++ +++|.++..|+|
T Consensus 187 ~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~~~~~~~~~~di~---~~gK~l~~g~~~ 263 (401)
T TIGR01885 187 VCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLLCVDHENVKPDIV---LLGKALSGGVYP 263 (401)
T ss_pred EEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHHhhcCCCCCEE---EeeccccCCCCC
Confidence 678888899999999997 6677777776 999999999987654332211 111123333 467999866699
Q ss_pred ccccccCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC--CCeecCCCceEEE
Q 014492 292 VGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP--FLNPYPSYSNFIL 367 (423)
Q Consensus 292 ~G~i~~~~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~~~~p~~~~~~~ 367 (423)
+|++++++++++.+..... .++.+++++.++.++|+..+. +...++.+++.+++.+.|++++ .+...++.|.+..
T Consensus 264 ig~v~~~~~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~i~~-~~l~~~~~~~~~~~~~~L~~l~~~~~~~~~g~g~~~~ 342 (401)
T TIGR01885 264 VSAVLADDDVMLTIKPGEHGSTYGGNPLACAVAVAALEVLEE-EKLAENAEKLGEIFRDQLKKLPKPIITEVRGRGLLNA 342 (401)
T ss_pred cEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHhccCCceeEEeecCeeEE
Confidence 9999999999887754222 356788888888888864221 1345667777889999998874 2222345566666
Q ss_pred EEeCCC---CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 368 CEVTSG---MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 368 ~~~~~~---~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
+.++.. .+..++++.|.++||.+.+.. ++.+||++....+.+++.+++++|
T Consensus 343 i~~~~~~~~~~~~~l~~~l~~~Gv~v~~~~----~~~lRi~p~l~~t~~~i~~~l~~l 396 (401)
T TIGR01885 343 IVIDESKTGRTAWDLCLKLKEKGLLAKPTH----GNIIRLAPPLVITEEQLDEGLEII 396 (401)
T ss_pred EEeccCcchhHHHHHHHHHHhCCEEEEecC----CCEEEEeCCccCCHHHHHHHHHHH
Confidence 666533 256789999999999998754 578999975323334455555443
No 226
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.88 E-value=4.1e-20 Score=182.78 Aligned_cols=318 Identities=15% Similarity=0.119 Sum_probs=207.6
Q ss_pred CeeEcCCCCCCCCCCHHHHHHHhcC--C-CCCCC-------CCcchHHHHH----HHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492 96 DIVKIDANENPYGPPPEVREALGQL--K-FPYIY-------PDPESRRLRA----ALAKDSGLESDHILVGCGADELIDL 161 (423)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~--~-~~~~Y-------~~~g~~~lr~----~ia~~~g~~~~~i~~t~G~~~al~~ 161 (423)
+.+.|-.++|.. +|.+++++... . ++.+| +++...+|++ .+++++|.+ ..++.+++++.|+..
T Consensus 29 ~~~~l~~sen~~--~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~~-~alv~~~SG~~A~~~ 105 (416)
T PRK13034 29 DHLELIASENFT--SPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFGCD-YANVQPHSGSQANGA 105 (416)
T ss_pred cCeeecccccCC--CHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhCCC-ceEEecCCcHHHHHH
Confidence 457887777776 78999888763 1 11111 2233567887 999999964 333455677889999
Q ss_pred HHHHhcCCCCeEEEcCCCchh-hHHHHHH--CCCeE--EEecC-CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCC
Q 014492 162 IMRCVLDPGDKIVDCPPTFTM-YEFDAAV--NGAAV--VKVPR-KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII 235 (423)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~-~~~~~~~--~g~~~--~~v~~-~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~ 235 (423)
++.++++|||+|+++..+|.. +...++. .+... +.++. ..++.+|++++++.+...++|+|+++++. +|...
T Consensus 106 ~l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~klVi~~~~~--~g~~~ 183 (416)
T PRK13034 106 VYLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRLTGLIDYDEVEELAKEHKPKLIIAGFSA--YPREL 183 (416)
T ss_pred HHHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEcccccccCCcCHHHHHHHHhhcCCeEEEECCCc--ccccc
Confidence 999999999999999999875 2222221 12222 23332 23457999999998865678998876654 57888
Q ss_pred CHHHHHHHHcC-CCEEEEccCCccccCCC-chhhhhccCCcEEEEccChhhhcccCccccccccCHHH-HHHHHHhcCCC
Q 014492 236 NDEDLLKILEM-PILVVLDEAYTEFSGLE-SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI-IEYLWRAKQPY 312 (423)
Q Consensus 236 ~~~~l~~i~~~-~~~li~Deay~~~~~~~-~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~-~~~l~~~~~~~ 312 (423)
+.+++.++|+. |+++|+|++|+...... .....+ ....+++.|++|.++.+ .-|+++++++. .+.++......
T Consensus 184 dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~--~~~Di~~~s~~K~l~g~--~GG~v~~~~~~~~~~~~~~~~~~ 259 (416)
T PRK13034 184 DFARFREIADEVGALLMVDMAHIAGLVAAGEHPNPF--PHAHVVTTTTHKTLRGP--RGGMILTNDEEIAKKINSAVFPG 259 (416)
T ss_pred CHHHHHHHHHHcCCEEEEeCcccccCcccCCCCCCC--CCceEEEEeCcccCCCC--CCeEEEECcHHHHHHHHhhcCCc
Confidence 99999999987 99999999998654321 111111 23568999999988322 23777776544 44444432221
Q ss_pred ---CCcHHHHHHHH-HHhCCh-HHHHHHHHHHHHHHHHHHHHHccCCCCeecC-CCceEEEEEeCC-CCCHHHHHHHHHh
Q 014492 313 ---NVSVAAEVAAC-AALQNP-IYLEKVKEALIKERERLFKLLKDVPFLNPYP-SYSNFILCEVTS-GMDAKKLKDDLAK 385 (423)
Q Consensus 313 ---~~~~~~~~a~~-~~l~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p-~~~~~~~~~~~~-~~~~~~l~~~L~~ 385 (423)
+..+....++. ++++.. ....+.++++.++.+++.+.|++.++-...+ +.+..+.+.+.+ +.+...+.+.|.+
T Consensus 260 ~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~G~~~~~~~~~t~i~~v~~~~~~~~~~~~~~~L~~ 339 (416)
T PRK13034 260 LQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKERGYDLVSGGTDNHLLLVDLRPKGLSGKDAEQALER 339 (416)
T ss_pred ccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHcCCEeccCCCCCcEEEEEcCCCCCCHHHHHHHHHh
Confidence 12222223222 222221 2234567889999999999998885422222 466777777753 4466777788889
Q ss_pred CCcEEEeC------CCCCCCCeEEEEecC-------hhhHHHHHHHHhhh
Q 014492 386 MGVMIRHY------NNKELKGYVRVSVGK-------PEHTDALMECLMHL 422 (423)
Q Consensus 386 ~gI~v~~~------~~~~~~~~iRis~~~-------~~~~~~l~~al~~l 422 (423)
+||.+... ..+..+..+|+++.. .++.+++.++|+++
T Consensus 340 ~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~ 389 (416)
T PRK13034 340 AGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILDV 389 (416)
T ss_pred CCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHH
Confidence 99999852 223346789999654 67788888877653
No 227
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.88 E-value=1.8e-20 Score=184.67 Aligned_cols=314 Identities=16% Similarity=0.157 Sum_probs=209.0
Q ss_pred CCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-CCC----CCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492 92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (423)
Q Consensus 92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~----~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~ 163 (423)
.++++++|+..+ .+.++ .+|++.+++.+ +.. +..|+.+...+|.+.++++.+. +.+++++++++++..++
T Consensus 32 ~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~L~~~~~~--~~~~f~~SGseA~e~Al 109 (397)
T TIGR03246 32 QQGKEYIDFAGGIAVNALGHAHPELVKALIEQADKLWHIGNGYTNEPVLRLAKKLVDATFA--DKVFFCNSGAEANEAAL 109 (397)
T ss_pred CCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhcccccCccCCHHHHHHHHHHHhhCCC--CEEEEeCCcHHHHHHHH
Confidence 457789999775 23333 47888888876 222 1233444456899999988763 68999999999999999
Q ss_pred HHhc-------CC-CCeEEEcCCCchhhHHH-HHHCCCe------------EEEecCCCCCCCCHHHHHHHhhcCCceEE
Q 014492 164 RCVL-------DP-GDKIVDCPPTFTMYEFD-AAVNGAA------------VVKVPRKSDFSLNVELIADAVEREKPKCI 222 (423)
Q Consensus 164 ~~l~-------~~-gd~Vl~~~p~y~~~~~~-~~~~g~~------------~~~v~~~~~~~~d~~~l~~~i~~~~~~~i 222 (423)
+... ++ .+.|+..+-.|+..... ....+.. +..+| ..|++++++.+. +++++|
T Consensus 110 k~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~l~-~~~aav 183 (397)
T TIGR03246 110 KLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAP-----YNDLAAAKALIS-DKTCAV 183 (397)
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeC-----CCCHHHHHHHhc-cCeEEE
Confidence 8541 12 35677777777654332 2323321 12222 237899999996 678999
Q ss_pred EEcCCCCCcCcCC-CHHHHHHH---HcC-CCEEEEccCCccccCCCchhh--hhccCCcEEEEccChhhhcccCcccccc
Q 014492 223 FLTSPNNPDGSII-NDEDLLKI---LEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLRVGYG 295 (423)
Q Consensus 223 ~l~~p~NPtG~~~-~~~~l~~i---~~~-~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~g~~G~R~G~i 295 (423)
+++.++++.|... +.+.+++| |+. |+++|+||+|..+...+.... ..+..+. +.+++|.+| .|+|+|++
T Consensus 184 i~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a~~~~gv~pD---i~t~~K~lg-gG~pigav 259 (397)
T TIGR03246 184 IVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPD---ILTSAKALG-GGFPIGAM 259 (397)
T ss_pred EEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccchhhhhcCCCCC---EEEeehhhh-CCcceeEE
Confidence 9887777777654 65555554 554 999999999987754332211 1111222 337899998 89999999
Q ss_pred ccCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC----CCeecCCCceEEEEE
Q 014492 296 AFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP----FLNPYPSYSNFILCE 369 (423)
Q Consensus 296 ~~~~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~----~~~~~p~~~~~~~~~ 369 (423)
++++++++.+..... .|+.+++++.++.++|+..+ -++..++++++.+++.+.|+++. .+...+..|.++.+.
T Consensus 260 ~~~~~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~-~~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~ 338 (397)
T TIGR03246 260 LTTTEIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVN-TPELLAGVKQRHDLFVDGLEKINARYNVFSEIRGKGLLIGAV 338 (397)
T ss_pred EEcHHHHHhccCCCcCCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhcCCCeEeeecCceEEEEE
Confidence 999999887754322 36678888888888886422 23567777888888888887653 122234556666676
Q ss_pred eCCC--CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 370 VTSG--MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 370 ~~~~--~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
+.+. .....+++.|.++||++.+.+ .+++|++++...+.+++++++++|
T Consensus 339 ~~~~~~~~~~~~~~~l~~~Gv~~~~~g----~~~lR~~p~~~~t~~~i~~~~~~l 389 (397)
T TIGR03246 339 LTEAYQGKAKQFVNAAAEEGVIALIAG----PNVVRFAPSLVISDDDIDEGLARF 389 (397)
T ss_pred EcCchhhHHHHHHHHHHHCCeEEeecC----CCEEEEeCCCCCCHHHHHHHHHHH
Confidence 6432 246788899999999998753 479999766444446666666554
No 228
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.88 E-value=1.2e-20 Score=186.24 Aligned_cols=244 Identities=17% Similarity=0.166 Sum_probs=170.3
Q ss_pred CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHH----HCCCeEEEecCC
Q 014492 125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA----VNGAAVVKVPRK 200 (423)
Q Consensus 125 ~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~v~~~ 200 (423)
+++++...+|+++++++.|. +..++++++++++..++.+++++||+|+++.+.|......+. ..|+++..++.
T Consensus 54 r~~~pt~~~Le~~lA~l~g~--~~~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~- 130 (425)
T PRK06084 54 RIMNPTNDVLEQRVAALEGG--VGALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAH- 130 (425)
T ss_pred CCCCchHHHHHHHHHHHhCC--CceeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECC-
Confidence 44667778999999999984 345567777799999999999999999999999974333332 25777766652
Q ss_pred CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEc
Q 014492 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR 279 (423)
Q Consensus 201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~ 279 (423)
.|++++++++. +++++|++++|+||||.+++.+++.++|+. |++||+|++|+..... .+. ..+..+++.
T Consensus 131 ----~d~e~le~ai~-~~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~~~~~-~p~----~~gaDivv~ 200 (425)
T PRK06084 131 ----DDIAALEALID-ERTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVATPVLC-RPF----EHGADIVVH 200 (425)
T ss_pred ----CCHHHHHHHhc-cCCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccC-Chh----hcCCCEEEE
Confidence 48999999997 689999999999999999999999999987 9999999999844321 111 234559999
Q ss_pred cChhhhcccCccccccccC-HHH--HH---H-------------------------H---H---HhcCCCCCcHHHHHHH
Q 014492 280 TFSKRAGLAGLRVGYGAFP-LSI--IE---Y-------------------------L---W---RAKQPYNVSVAAEVAA 322 (423)
Q Consensus 280 S~SK~~g~~G~R~G~i~~~-~~~--~~---~-------------------------l---~---~~~~~~~~~~~~~~a~ 322 (423)
|++|.++.+|.++|.+++. +.+ .+ . . . .......+++.....+
T Consensus 201 S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~l~~~~a~l~ 280 (425)
T PRK06084 201 SLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLRNMGAALSPFNAFLI 280 (425)
T ss_pred CchhcccccccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcchHHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 9999998889998876653 221 00 0 0 0 0111123444444433
Q ss_pred HHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCe-e-cC----------------C-CceEEEEEeCCCC-CHHHHHHH
Q 014492 323 CAALQNPIYLEKVKEALIKERERLFKLLKDVPFLN-P-YP----------------S-YSNFILCEVTSGM-DAKKLKDD 382 (423)
Q Consensus 323 ~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~p----------------~-~~~~~~~~~~~~~-~~~~l~~~ 382 (423)
. +..+.+..+.++..++..++.+.|++.+.+. + +| + .|..+.+++.++. ....|++.
T Consensus 281 l---rgl~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~~gg~~s~~~~~~~~~~~~f~~~ 357 (425)
T PRK06084 281 L---QGLETLALRMERHTENALKVARYLQQHPQVAWVKYAGLPDHPEHELARRYMGGKPASILSFGIKGGQAAGARFIDA 357 (425)
T ss_pred H---cCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCcccHHHHHHhCCCCcceEEEEEecCCHHHHHHHHHh
Confidence 3 3334466777777888999999999876543 2 22 2 2556777875321 23455555
Q ss_pred HH
Q 014492 383 LA 384 (423)
Q Consensus 383 L~ 384 (423)
|.
T Consensus 358 l~ 359 (425)
T PRK06084 358 LK 359 (425)
T ss_pred CC
Confidence 54
No 229
>PLN02624 ornithine-delta-aminotransferase
Probab=99.87 E-value=8.3e-20 Score=183.18 Aligned_cols=317 Identities=15% Similarity=0.156 Sum_probs=202.9
Q ss_pred CCCCCCeeEcCCCCCCC--C-CCHHHHHHHhc-CC---CC-CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492 91 GRKPEDIVKIDANENPY--G-PPPEVREALGQ-LK---FP-YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (423)
Q Consensus 91 ~~~~~~~i~l~~~~~~~--~-~~~~v~~al~~-~~---~~-~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~ 162 (423)
+.+++.++||..+.... + .+|+|.+++.+ +. .. ..+..+...+|.+.++++++. +.++++++++++++.+
T Consensus 71 d~dG~~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~L~~~~~~--~~~~f~~SGseA~e~A 148 (474)
T PLN02624 71 DPEGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLTLSSRAFYNDKFPEFAEYLTSMFGY--DMVLPMNTGAEGVETA 148 (474)
T ss_pred ECCCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHhhcCC--CeEEEeCChHHHHHHH
Confidence 45678899998774433 2 37899888876 22 11 123444567899999999874 6899999999999999
Q ss_pred HHHhcC---------CC-CeEEEcCCCchhhHHHHHHCCCe-------------EEEecCCCCCCCCHHHHHHHhhc--C
Q 014492 163 MRCVLD---------PG-DKIVDCPPTFTMYEFDAAVNGAA-------------VVKVPRKSDFSLNVELIADAVER--E 217 (423)
Q Consensus 163 ~~~l~~---------~g-d~Vl~~~p~y~~~~~~~~~~g~~-------------~~~v~~~~~~~~d~~~l~~~i~~--~ 217 (423)
++.... ++ ..|+....+|++....+...... +..+|. .|++.+++.++. .
T Consensus 149 lklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~~ 223 (474)
T PLN02624 149 IKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDF-----GDLDALEKIFEEDGD 223 (474)
T ss_pred HHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCC-----CCHHHHHHHHHhCCC
Confidence 874321 12 25777777887543332221111 122221 268899888853 4
Q ss_pred CceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCchhhh--hccCCcEEEEccChhhhcccCc
Q 014492 218 KPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEW--VKKHDNLIVLRTFSKRAGLAGL 290 (423)
Q Consensus 218 ~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~--~~~~~~~i~i~S~SK~~g~~G~ 290 (423)
++++|+++.++|++|.+++ .+++.++|+. |+++|+||+|..+...+..... ....+.+ .++||.+|.+++
T Consensus 224 ~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~a~~~~~i~pDi---v~lsK~lggG~~ 300 (474)
T PLN02624 224 RIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLACDWEEVRPDV---VILGKALGGGVI 300 (474)
T ss_pred CEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchhhHHhcCCCCCE---EEecccccCCCC
Confidence 6889999999999999998 6667777776 9999999999876543332211 1222222 336899997669
Q ss_pred cccccccCHHHHHHHHHhc--CCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc----CCC-CeecCCCc
Q 014492 291 RVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKD----VPF-LNPYPSYS 363 (423)
Q Consensus 291 R~G~i~~~~~~~~~l~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~-~~~~p~~~ 363 (423)
++|++++++++++.+.... ..++.+++.+.++.++|+..+. ....++..++.+++.+.|++ ++. +....+.|
T Consensus 301 pigav~~~~~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l~~-~~l~~~~~~~~~~l~~~L~~l~~~~~~~i~~vrg~G 379 (474)
T PLN02624 301 PVSAVLADKDVMLCIKPGEHGSTFGGNPLASAVAMAALQVVQD-EKLAERSAKLGQELRDQLQKIQKQFPKLIKEVRGRG 379 (474)
T ss_pred cceeeeecHHHHhHhccCCcCCCCCCCHHHHHHHHHHHHHHHh-chHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeE
Confidence 9999999998887765433 2356788888888888753211 12333344444444444443 331 22123456
Q ss_pred eEEEEEeCCC----CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 364 NFILCEVTSG----MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 364 ~~~~~~~~~~----~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.++.+.+... ..+.++++.|.++||++.+.. .++|||++....+.+++.+++++|
T Consensus 380 ~~~~i~l~~~~~~~~~a~~~~~~L~e~GV~v~p~~----~~~lR~~p~l~~t~e~id~~l~~L 438 (474)
T PLN02624 380 LLNAVVLNSPKLGPVSAYDVCLKLKERGLLAKPTH----DTIIRLAPPLSISEDELQECSKAL 438 (474)
T ss_pred EEEEEEecCCCcChHHHHHHHHHHHhCCeEEecCC----CCEEEEECCccCCHHHHHHHHHHH
Confidence 6666666421 235678888999999998764 578999974333335555555443
No 230
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.87 E-value=1.3e-20 Score=178.35 Aligned_cols=223 Identities=16% Similarity=0.076 Sum_probs=158.6
Q ss_pred CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CC
Q 014492 125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SD 202 (423)
Q Consensus 125 ~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~ 202 (423)
.+|+.-..++++.+|+++|.+ +.+++++|+++++..++.+++++||+|+++.|+|......+...|++++.++.+ .+
T Consensus 55 ~~~~g~i~~~~~~~A~~~ga~-~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~~~ 133 (294)
T cd00615 55 LDPTGPIKEAQELAARAFGAK-HTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLSGAVPVYLKPERNPY 133 (294)
T ss_pred CCCChHHHHHHHHHHHHhCCC-CEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHHCCCEEEEecCccCcc
Confidence 346655789999999999964 455669999999999999999999999999999998888888999999998753 22
Q ss_pred ----CCCCHHHHHHHhhc-CCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccc-cCCCchhhhhccCCcE
Q 014492 203 ----FSLNVELIADAVER-EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEF-SGLESRMEWVKKHDNL 275 (423)
Q Consensus 203 ----~~~d~~~l~~~i~~-~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~-~~~~~~~~~~~~~~~~ 275 (423)
..+|++++++.+.+ .+++++++++| |++|.+++.+++.++|+. |+++|+||+|..+ .+.+.........+.+
T Consensus 134 ~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~~~~d 212 (294)
T cd00615 134 YGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMAGAD 212 (294)
T ss_pred cCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhhcCCc
Confidence 36899999999964 57899999999 789999999999999987 9999999999753 2322211222235678
Q ss_pred EEEccChhhhcccCccccccc-cCHHH--HHHHHH---hcCCCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHH
Q 014492 276 IVLRTFSKRAGLAGLRVGYGA-FPLSI--IEYLWR---AKQPYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFK 348 (423)
Q Consensus 276 i~i~S~SK~~g~~G~R~G~i~-~~~~~--~~~l~~---~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~ 348 (423)
+++.|++|.+ +|++.|+++ .+.+. .+++.. ..+..+++.+...++..++.. ...-++..+++.++.+.+++
T Consensus 213 iv~~S~hK~l--~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ttsps~~~~asl~~a~~~~~~~g~~~~~~~~~~~~~~r~ 290 (294)
T cd00615 213 IVVQSTHKTL--PALTQGSMIHVKGDLVNPDRVNEALNLHQSTSPSYLILASLDVARAMMALEGKELVEELIELALYARQ 290 (294)
T ss_pred EEEEchhccc--chHhHHHHHHhCCCcCCHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 9999999964 788765444 43321 122222 223345555555544444432 11223344445555555555
Q ss_pred HHc
Q 014492 349 LLK 351 (423)
Q Consensus 349 ~L~ 351 (423)
.|.
T Consensus 291 ~l~ 293 (294)
T cd00615 291 EIN 293 (294)
T ss_pred HHh
Confidence 553
No 231
>PLN02509 cystathionine beta-lyase
Probab=99.87 E-value=2.6e-20 Score=184.44 Aligned_cols=213 Identities=15% Similarity=0.166 Sum_probs=156.4
Q ss_pred CcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHH----HHHHCCCeEEEecCCCCC
Q 014492 128 DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRKSDF 203 (423)
Q Consensus 128 ~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~~~~ 203 (423)
++....+++.++++.| .++.++++|+++++..++. ++++||+|+++.|.|..+.. .....|++++.++.
T Consensus 132 npt~~aLE~~lA~leg--~e~ai~~~SG~aAi~~il~-ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~---- 204 (464)
T PLN02509 132 NPTRDALESLLAKLDK--ADRAFCFTSGMAALSAVTH-LIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNT---- 204 (464)
T ss_pred CHHHHHHHHHHHHHhC--CCEEEEeCcHHHHHHHHHH-HhCCCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeCC----
Confidence 4446788999999887 3466677777889877664 78999999999999987763 34568999998863
Q ss_pred CCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccCh
Q 014492 204 SLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFS 282 (423)
Q Consensus 204 ~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~S 282 (423)
.|++++++++. +++|+|++++|+||||.+.+.+++.++|+. |+++|+|++|...... ... ..+.++++.|++
T Consensus 205 -~d~e~l~~ai~-~~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~-~pl----~~gaDivv~S~t 277 (464)
T PLN02509 205 -TNLDEVAAAIG-PQTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPVLS-RPL----ELGADIVMHSAT 277 (464)
T ss_pred -CCHHHHHHhCC-cCCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCccccccC-Chh----hcCCcEEEecCc
Confidence 36899999996 689999999999999999999999999987 9999999998744322 111 233459999999
Q ss_pred hhhcccC-ccccccccC-HHHHHHHHHhcC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCe
Q 014492 283 KRAGLAG-LRVGYGAFP-LSIIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLN 357 (423)
Q Consensus 283 K~~g~~G-~R~G~i~~~-~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 357 (423)
|.++.+| .=.|+++.+ +.+.+++...+. ...+++.....+. ...+.+..+.++.+++.+++.+.|++.+.+.
T Consensus 278 K~l~G~gdv~gG~v~~~~~~l~~~~~~~~~~~g~~l~p~~A~l~l---r~L~tL~~R~~r~~~nA~~la~~L~~~p~V~ 353 (464)
T PLN02509 278 KFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCL---RGIKTMALRIEKQQENARKIAMYLSSHPRVK 353 (464)
T ss_pred ccccCCCccceeEEEeccHHHHHHHHHHHHhcCCCcCHHHHHHHH---hhhhhHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 9876433 235777764 444444433322 2234555544333 3345577788888999999999999877553
No 232
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.87 E-value=6.4e-20 Score=178.99 Aligned_cols=216 Identities=14% Similarity=0.125 Sum_probs=155.9
Q ss_pred CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhh----HHHHHHCCCeEEEecC
Q 014492 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMY----EFDAAVNGAAVVKVPR 199 (423)
Q Consensus 124 ~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~----~~~~~~~g~~~~~v~~ 199 (423)
.+|+++....|+++++++.|.+ ..+++++|+ .++..++. +++|||+|++++|.|+.. ...++..|++++.++.
T Consensus 45 ~r~~~p~~~~Le~~la~l~g~~-~al~~~SG~-~Al~~~l~-~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~ 121 (380)
T PRK06176 45 SRSGNPTRFALEELIADLEGGV-KGFAFASGL-AGIHAVFS-LFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDT 121 (380)
T ss_pred cCCCChhHHHHHHHHHHHhCCC-CEEEECCHH-HHHHHHHH-HcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCC
Confidence 4567777889999999999954 456666665 58877775 789999999999999633 3445668999888874
Q ss_pred CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEE
Q 014492 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (423)
Q Consensus 200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i 278 (423)
.|+++++++++ +++++|++++|+||||.+.+.+++.++++. |+++|+|++|....... +. ..+..+++
T Consensus 122 -----~d~e~l~~ai~-~~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~~~~~~-p~----~~gaDivv 190 (380)
T PRK06176 122 -----SDLSQIKKAIK-PNTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFATPYYQN-PL----LLGADIVV 190 (380)
T ss_pred -----CCHHHHHHhcC-cCceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCccccccCC-cc----ccCCCEEE
Confidence 37999999997 689999999999999999999999999998 99999999998543321 11 23445899
Q ss_pred ccChhhhcccC-ccccccccC-HHHHHHHHHhcCCC--CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC
Q 014492 279 RTFSKRAGLAG-LRVGYGAFP-LSIIEYLWRAKQPY--NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP 354 (423)
Q Consensus 279 ~S~SK~~g~~G-~R~G~i~~~-~~~~~~l~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 354 (423)
.|++|.++.+| .-.|+++.+ +++.+++...+... .+++.....+...+ +.+..+.++..++..++.+.|++.+
T Consensus 191 ~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~~~l~~~gl---~tl~~R~~~~~~~a~~la~~L~~~p 267 (380)
T PRK06176 191 HSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVLGPQDSWLLQRGI---KTLGLRMEAHQKNALCVAEFLEKHP 267 (380)
T ss_pred ecCceeccCCccceeeEEEecHHHHHHHHHHHHHHhcCCCCHHHHHHHHhcc---CcHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999887555 335777764 56666665544332 23444433333333 3345555666677778888887765
Q ss_pred CC
Q 014492 355 FL 356 (423)
Q Consensus 355 ~~ 356 (423)
.+
T Consensus 268 ~v 269 (380)
T PRK06176 268 KV 269 (380)
T ss_pred Ce
Confidence 43
No 233
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.87 E-value=9.5e-20 Score=180.72 Aligned_cols=328 Identities=14% Similarity=0.065 Sum_probs=204.1
Q ss_pred CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCCC--CC---CCCcchHHHHHHHHHHhCC-CCCcEEEeCCHHHHHH
Q 014492 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP--YI---YPDPESRRLRAALAKDSGL-ESDHILVGCGADELID 160 (423)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~--~~---Y~~~g~~~lr~~ia~~~g~-~~~~i~~t~G~~~al~ 160 (423)
..+++.+||+..+. ..++ .+|++.+|+.+ +... .. ++.+...++-+.+++...- ..+.++++++++++++
T Consensus 29 D~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e 108 (420)
T TIGR00700 29 DVDGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHTCFMVTPYEGYVALAEKLNRIAPGSGPKKSVFFNSGAEAVE 108 (420)
T ss_pred eCCCCEEEECccCHHhccCCCCCHHHHHHHHHHHHhccCccccccCChHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHH
Confidence 35677899997773 3333 46888888876 2211 11 2233345677777777642 2368999999999999
Q ss_pred HHHHHhc--CCCCeEEEcCCCchhhHHHHHHC-CC-------------eEEEecCCCCCC-----------CCHHHHHHH
Q 014492 161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAVN-GA-------------AVVKVPRKSDFS-----------LNVELIADA 213 (423)
Q Consensus 161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~-g~-------------~~~~v~~~~~~~-----------~d~~~l~~~ 213 (423)
.+++... ....+|+....+|++....+... |- .+..+|....+. -+++.+++.
T Consensus 109 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (420)
T TIGR00700 109 NAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAI 188 (420)
T ss_pred HHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHH
Confidence 9988432 22357888888887554333221 10 122233211100 124566666
Q ss_pred hh----cCCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhh
Q 014492 214 VE----REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKR 284 (423)
Q Consensus 214 i~----~~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~ 284 (423)
+. ..++.+|++...+.-+|.+++ .+++.++|+. |+++|+||+|..|...+... .....+....+.++||.
T Consensus 189 ~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~~-a~~~~~~~pDi~~lsK~ 267 (420)
T TIGR00700 189 FVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMF-ACEHEGPEPDLITTAKS 267 (420)
T ss_pred HHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchhH-HHhhcCCCCCEEEeecc
Confidence 52 256788988877777898876 4445556665 99999999999886544322 11122222234468999
Q ss_pred hcccCccccccccCHHHHHHHHHh--cCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeec
Q 014492 285 AGLAGLRVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPY 359 (423)
Q Consensus 285 ~g~~G~R~G~i~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 359 (423)
++ +|+|+||+++++++++.+... ...++.+++++.++.++|+. +++.+...+.-+..++.+.+..+.++.+...
T Consensus 268 l~-~G~pig~v~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v 346 (420)
T TIGR00700 268 LA-DGLPLSGVTGRAEIMDAPAPGGLGGTYAGNPLACAAALAVLAIIESEGLIERARQIGRLVTDRLTTLKAVDPRIGDV 346 (420)
T ss_pred cc-CCcceEEEEecHHHHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCEEEe
Confidence 98 999999999999998877532 33477899999988777642 3333333333333444444443445544333
Q ss_pred CCCceEEEEEeCCC-------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 360 PSYSNFILCEVTSG-------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 360 p~~~~~~~~~~~~~-------~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.+.|.++++++.+. .....+.+.+.++||.+.+++.+ .+++||+++...+.+++.+++++|
T Consensus 347 rg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~p~~~f--~~~lRl~p~l~~~~~~l~~~~~~l 414 (420)
T TIGR00700 347 RGLGAMIAVELVDPGTTEPDAGLAERIATAAHAAGLLLLTCGMF--GNIIRFLPPLTIGDELLSEGLDIL 414 (420)
T ss_pred eccceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeccCCC--CCEEEEECCCCcCHHHHHHHHHHH
Confidence 45588888877321 11345666777999999987543 379999986533346677777665
No 234
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.86 E-value=1.3e-19 Score=176.07 Aligned_cols=214 Identities=14% Similarity=0.082 Sum_probs=159.8
Q ss_pred CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHH----HHHHCCCeEEEecCCCC
Q 014492 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRKSD 202 (423)
Q Consensus 127 ~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~~~ 202 (423)
.+|..+.|++.++...+ .++.+++++ +++|+..++.+++++||+|+++.|.|..+.. .++..|+++..++.+
T Consensus 62 gnPt~~~Le~~la~le~-~~~~v~~sS-G~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~-- 137 (395)
T PRK05967 62 GTPTTDALCKAIDALEG-SAGTILVPS-GLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPE-- 137 (395)
T ss_pred CChHHHHHHHHHHHHhC-CCCEEEECc-HHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCC--
Confidence 44455689999998876 334555555 6899999999999999999999999987664 456789999998632
Q ss_pred CCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccC
Q 014492 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF 281 (423)
Q Consensus 203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~ 281 (423)
+.+.++++++ +++|+|++++|+||+|.+.+++++.++|+. |+++|+|++|...... .+. .++..+++.|.
T Consensus 138 ---~~e~l~~al~-~~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~p~~~-~pl----~~GaDivv~S~ 208 (395)
T PRK05967 138 ---IGAGIAKLMR-PNTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWATPLYF-RPL----DFGVDISIHAA 208 (395)
T ss_pred ---CHHHHHHhcC-cCceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccCceec-Chh----HcCCCEEEEec
Confidence 3578999987 689999999999999999999999999987 9999999999854321 111 24556999999
Q ss_pred hhhhcc-cCccccccccCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCC
Q 014492 282 SKRAGL-AGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFL 356 (423)
Q Consensus 282 SK~~g~-~G~R~G~i~~~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 356 (423)
+|.++- .+.-.|+++.+++..+++...... ..+++.... .+++..+.+..+.++..++...+.+.|++.+.+
T Consensus 209 tKy~~Gh~d~~~G~v~~~~~~~~~l~~~~~~~G~~~~p~da~---l~~rgl~Tl~lR~~~~~~na~~lA~~L~~hp~v 283 (395)
T PRK05967 209 TKYPSGHSDILLGTVSANEKCWPQLLEAHGTLGLCAGPDDTY---QILRGLRTMGIRLEHHRKSALEIARWLEGRPDV 283 (395)
T ss_pred ccccCCCCCeeEEEEEcCHHHHHHHHHHHHHcCCCCCHHHHH---HHHcCcccHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 997542 235578887777776666533322 234555433 444444556777777788999999999987655
No 235
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.86 E-value=9.8e-19 Score=171.68 Aligned_cols=284 Identities=15% Similarity=0.163 Sum_probs=196.6
Q ss_pred CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC-CCCC
Q 014492 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFS 204 (423)
Q Consensus 127 ~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~ 204 (423)
..+...++|+++++++|.+ +.++++|+++++.+++.++ +++||+|+++.|+|..+...++..|++++.++.+ +++.
T Consensus 27 ~g~~~~~le~~la~~~g~~--~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~ 104 (380)
T TIGR03588 27 QGPTVPAFEEALAEYVGAK--YAVAFNSATSALHIACLALGVGPGDRVWTTPITFVATANCALYCGAKVDFVDIDPDTGN 104 (380)
T ss_pred CChhHHHHHHHHHHHHCCC--eEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHHHcCCEEEEEecCCCcCC
Confidence 3456789999999999974 4566678899999999988 7899999999999999888888999999999974 4678
Q ss_pred CCHHHHHHHhhc---CCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCcccc-CCCchhhhhccCCcEEEEc
Q 014492 205 LNVELIADAVER---EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLESRMEWVKKHDNLIVLR 279 (423)
Q Consensus 205 ~d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~-~~~~~~~~~~~~~~~i~i~ 279 (423)
+|++++++.+++ +++++|+++ |++|...+.+++.++|+. |++||+|++|+.+. +.+...... . ...+.+.
T Consensus 105 ~d~~~l~~~i~~~~~~~t~~v~~~---~~~G~~~~~~~i~~l~~~~~~~lI~D~a~a~g~~~~~~~~g~~-~-~~d~~~~ 179 (380)
T TIGR03588 105 IDEDALEKKLAAAKGKLPKAIVPV---DFAGKSVDMQAIAALAKKHGLKIIEDASHALGAEYGGKPVGNC-R-YADATVF 179 (380)
T ss_pred cCHHHHHHHhhcccCCCceEEEEe---CCCCccCCHHHHHHHHHHcCCEEEEECCCcccCccCCEeCCCc-c-ccceEEE
Confidence 999999999963 478988854 568999999999999987 99999999998653 222222211 0 1246677
Q ss_pred cCh--hhhcccCcccccccc-CHHHHHHHHHhcCC---------------------------CCCcHHHHHHHHHHhCCh
Q 014492 280 TFS--KRAGLAGLRVGYGAF-PLSIIEYLWRAKQP---------------------------YNVSVAAEVAACAALQNP 329 (423)
Q Consensus 280 S~S--K~~g~~G~R~G~i~~-~~~~~~~l~~~~~~---------------------------~~~~~~~~~a~~~~l~~~ 329 (423)
|++ |.++. | ..|+++. ++++.++++..+.. +.++.+....+...|
T Consensus 180 S~~~~K~~~~-~-~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL--- 254 (380)
T TIGR03588 180 SFHPVKIITT-A-EGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQL--- 254 (380)
T ss_pred ecCCCCcccc-c-CceEEEECCHHHHHHHHHHHHCCCCCCcccccccccCcceeeeeccccccCccHHHHHHHHHHH---
Confidence 765 87753 3 3566665 46677766543210 112223323233333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCCeec-CC-C---ceEE-EEEeC--CCCCHHHHHHHHHhCCcEEEeCCCC-----
Q 014492 330 IYLEKVKEALIKERERLFKLLKDVPFLNPY-PS-Y---SNFI-LCEVT--SGMDAKKLKDDLAKMGVMIRHYNNK----- 396 (423)
Q Consensus 330 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~-~---~~~~-~~~~~--~~~~~~~l~~~L~~~gI~v~~~~~~----- 396 (423)
+.+++..++-+++.+++.+.|.+++.+.+. +. . ..++ .+.++ .+.+.+++.+.|.++||.++....+
T Consensus 255 ~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~r~~l~~~L~~~gI~~~~~~~~~~~~~ 334 (380)
T TIGR03588 255 KKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLDQEFGCTRKEVFEALRAAGIGVQVHYIPVHLQP 334 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEECCcCCCCHHHHHHHHHHCCCCcccCCcccccCh
Confidence 235667777788888999999888765532 21 1 1222 23443 3467899999999999988632210
Q ss_pred ---------CCC-------CeEEEEec---ChhhHHHHHHHHhhh
Q 014492 397 ---------ELK-------GYVRVSVG---KPEHTDALMECLMHL 422 (423)
Q Consensus 397 ---------~~~-------~~iRis~~---~~~~~~~l~~al~~l 422 (423)
..+ ..+++.+. +.++++.+.++++++
T Consensus 335 ~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~l~~~ 379 (380)
T TIGR03588 335 YYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVETLRKV 379 (380)
T ss_pred hhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHHHHHHHHh
Confidence 011 45777653 566778888887764
No 236
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.86 E-value=1.4e-19 Score=170.37 Aligned_cols=323 Identities=18% Similarity=0.197 Sum_probs=221.9
Q ss_pred hCCCCCCeeEcCCC--CCCCC-CCHHHHHHHhcC-----CCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492 90 LGRKPEDIVKIDAN--ENPYG-PPPEVREALGQL-----KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (423)
Q Consensus 90 ~~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~~-----~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~ 161 (423)
|+..++.+|||..| .+.++ .+|.+.+++.+. ..++.|.++...+|-+.+++..+ ..+.|+++|+++||++.
T Consensus 37 ~D~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~sn~~~~~~~~~la~~L~~~s~-~~d~vff~NSGaEA~Ea 115 (404)
T COG4992 37 WDQQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVSNLFYNEPQAELAEKLVELSP-FADRVFFCNSGAEANEA 115 (404)
T ss_pred ECCCCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhcccccCChHHHHHHHHHHhhCc-cccEEEEcCCcHHHHHH
Confidence 45678899999877 45555 579999999762 12345666667788888888887 68999999999999999
Q ss_pred HHHHhc---C-C-CCeEEEcCCCchhhHHHHHHCCCeEEE----ecCCCCC----CCCHHHHHHHhhcCCceEEEEcCCC
Q 014492 162 IMRCVL---D-P-GDKIVDCPPTFTMYEFDAAVNGAAVVK----VPRKSDF----SLNVELIADAVEREKPKCIFLTSPN 228 (423)
Q Consensus 162 ~~~~l~---~-~-gd~Vl~~~p~y~~~~~~~~~~g~~~~~----v~~~~~~----~~d~~~l~~~i~~~~~~~i~l~~p~ 228 (423)
+++.-. . + ..+|+....+|+.-...+-..+.+... -|+.+++ --|+++++++++ +++.+|++...+
T Consensus 116 AiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfnDi~al~~ai~-~~taAvivEPIQ 194 (404)
T COG4992 116 ALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFNDIEALEAAID-EDTAAVIVEPIQ 194 (404)
T ss_pred HHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCCCHHHHHHHhc-cCeEEEEEeccc
Confidence 998432 2 2 247887777776433222222222210 1222221 138999999998 599999999899
Q ss_pred CCcCcCCCHHH----HHHHHcC-CCEEEEccCCccccCCCchhh--hhccCCcEEEEccChhhhcccCccccccccCHHH
Q 014492 229 NPDGSIINDED----LLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI 301 (423)
Q Consensus 229 NPtG~~~~~~~----l~~i~~~-~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~ 301 (423)
-..|++.+.++ +++||+. |+++|.||++..+...+..+. +.+..+.++ ++.|.+| .|+.+|.+++.+.+
T Consensus 195 GEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~gV~PDI~---tlaK~Lg-GG~PigA~la~~~~ 270 (404)
T COG4992 195 GEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYEHYGVEPDIL---TLAKALG-GGFPIGAMLATEEI 270 (404)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHHHHHhCCCCCEE---Eeecccc-CCccceeeEEchhh
Confidence 99998876554 4556766 999999999998876554332 222233333 4679998 88999999998555
Q ss_pred HHHHHH--hcCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCH
Q 014492 302 IEYLWR--AKQPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDA 376 (423)
Q Consensus 302 ~~~l~~--~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~ 376 (423)
.+.+.. ....|+.|+++.+++.++|+- ++.+++.++.-...++.|.+...+.+.+.-..+.|.++-+++.....+
T Consensus 271 ~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~~e~ll~~v~~~g~~~~~~L~~l~~~~~~v~~vRG~GLmiGiel~~~~~a 350 (404)
T COG4992 271 ASAFTPGDHGSTFGGNPLACAVALAVLEVLLEEGLLENVREKGEYLLQRLRELKRRYPLVKEVRGRGLMIGIELKEPYRA 350 (404)
T ss_pred hhcCCCCcccCCCCcCHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHhhcCCceeeeecceeEEEEEecCcccH
Confidence 554432 234578899998888877763 455555555555555555555555564454578899999999644458
Q ss_pred HHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 377 KKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 377 ~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.++.+.|.++|+++...+ ++.+|+.....-+.+++.++++++
T Consensus 351 ~~~~~~~~~~gvL~~~a~----~~ViR~~PpL~i~~eei~~~~~~l 392 (404)
T COG4992 351 RDIVRALREEGVLVLPAG----PNVIRFLPPLVITEEEIDEALDAL 392 (404)
T ss_pred HHHHHHHHHCCeEEecCC----CCeEEecCCccCCHHHHHHHHHHH
Confidence 899999999999998866 569999976433335555555544
No 237
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.85 E-value=3.8e-19 Score=176.17 Aligned_cols=326 Identities=14% Similarity=0.152 Sum_probs=203.0
Q ss_pred CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCCC--CC---CCCcchHHHHHHHHHHhCC-CCCcEEEeCCHHHHHH
Q 014492 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP--YI---YPDPESRRLRAALAKDSGL-ESDHILVGCGADELID 160 (423)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~--~~---Y~~~g~~~lr~~ia~~~g~-~~~~i~~t~G~~~al~ 160 (423)
+.+++.+||+..+. ..++ .+|++.+++.+ +... .. ++.+...++-+.+++..+. ..+.++++++++++++
T Consensus 36 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e 115 (421)
T PRK09792 36 DVEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAYQIVPYESYVTLAEKINALAPVSGQAKTAFFTTGAEAVE 115 (421)
T ss_pred eCCCCEEEEccCchhhhcCCCCCHHHHHHHHHHHHhccCcccCccCCHHHHHHHHHHHHhCCCCCCceEEEeCChHHHHH
Confidence 45678899997663 3333 46888888876 2211 11 1222334677777776542 2368999999999999
Q ss_pred HHHHHhc--CCCCeEEEcCCCchhhHHHHHH-CCC-------------eEEEecCCCC-CCC----CHHHHHHHhh----
Q 014492 161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKSD-FSL----NVELIADAVE---- 215 (423)
Q Consensus 161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g~-------------~~~~v~~~~~-~~~----d~~~l~~~i~---- 215 (423)
.+++... ....+|+....+|++....+.. .|. .++.+|.+.+ ..+ +++.+++.+.
T Consensus 116 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~ 195 (421)
T PRK09792 116 NAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIE 195 (421)
T ss_pred HHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhccC
Confidence 9988542 1235788888888754432221 111 1233332111 112 3477887775
Q ss_pred cCCceEEEEcCCCCCcCcCC-CHHHHHHH---HcC-CCEEEEccCCccccCCCchh--hhhccCCcEEEEccChhhhccc
Q 014492 216 REKPKCIFLTSPNNPDGSII-NDEDLLKI---LEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLA 288 (423)
Q Consensus 216 ~~~~~~i~l~~p~NPtG~~~-~~~~l~~i---~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~i~S~SK~~g~~ 288 (423)
..++++|+++..++|+|... +.+.+++| |+. |+++|+||+|.+|...+... ......+. +.+|+|.++ +
T Consensus 196 ~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pD---i~t~gK~l~-~ 271 (421)
T PRK09792 196 AKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPD---LMTMAKSLA-G 271 (421)
T ss_pred CCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHhcCCCCc---EEEeehhhc-C
Confidence 25688999987799999866 75555555 544 99999999999886544322 22222222 568899998 8
Q ss_pred CccccccccCHHHHHHHHHh--cCCCCCcHHHHHHHHHHhC---ChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCc
Q 014492 289 GLRVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQ---NPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYS 363 (423)
Q Consensus 289 G~R~G~i~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~ 363 (423)
|+|+||+++++++.+.+... ...++.+++++.++.++++ +++++++.++.-+..++.+.+..++.+.+....+.|
T Consensus 272 G~pigav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~l~~~~p~v~~vrG~G 351 (421)
T PRK09792 272 GMPLSGVVGNANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKESLCERANQLGQRLKNTLIDAKESVPAIAAVRGLG 351 (421)
T ss_pred CCceEEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhCCCcceecccc
Confidence 99999999999998876532 2347788999886666654 334444444332333333333223455443334458
Q ss_pred eEEEEEeCCC-------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 364 NFILCEVTSG-------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 364 ~~~~~~~~~~-------~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.++|+++++. .....+++.+.++||++.+.+ ...+.|||.++...+.+++.++++.+
T Consensus 352 l~~~ie~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~g--~~~~~irl~P~l~i~~~ei~~~~~~l 415 (421)
T PRK09792 352 SMIAAEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTCG--AYGNVIRFLYPLTIPDAQFDAAMKIL 415 (421)
T ss_pred eEEEEEecCCccCCcchHHHHHHHHHHHHCCcEEeecC--CCCCEEEEeCCCcCCHHHHHHHHHHH
Confidence 9999999743 235667888889999996422 23579999977533335565555543
No 238
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.85 E-value=6.7e-19 Score=174.36 Aligned_cols=215 Identities=16% Similarity=0.156 Sum_probs=155.6
Q ss_pred CCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchh----hHHHHHHCCCeEEEecCCC
Q 014492 126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKS 201 (423)
Q Consensus 126 Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~ 201 (423)
++++....|++.++++.|.+ ..++++++++++..++.+++++||+|+++.+.|.. +...++..|++++.++.
T Consensus 60 ~~~p~~~~le~~lA~l~g~~--~al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~-- 135 (427)
T PRK05994 60 ITNPTNAVLEERVAALEGGT--AALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADA-- 135 (427)
T ss_pred CCCccHHHHHHHHHHHhCCC--cEEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECC--
Confidence 35556788999999999964 36677888889999999999999999999999974 33445678999999874
Q ss_pred CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEcc
Q 014492 202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRT 280 (423)
Q Consensus 202 ~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S 280 (423)
.|+++++++++ +++++|++++|+||||.+.+.+++.++++. |+++|+|++|...... .+ + ..+..+++.|
T Consensus 136 ---~d~~~l~~ai~-~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~~~-~p---l-~~gaDivv~S 206 (427)
T PRK05994 136 ---DDPASFERAIT-PRTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPYLI-RP---I-EHGADIVVHS 206 (427)
T ss_pred ---CCHHHHHHhcC-cCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCccccccC-Cc---c-ccCCcEEEEc
Confidence 37899999997 689999999999999999999999999987 9999999999733211 11 1 2345599999
Q ss_pred ChhhhcccCccccccccC-H------------------H-----HHHH-----------HHHhc-CCCCCcHHHHHHHHH
Q 014492 281 FSKRAGLAGLRVGYGAFP-L------------------S-----IIEY-----------LWRAK-QPYNVSVAAEVAACA 324 (423)
Q Consensus 281 ~SK~~g~~G~R~G~i~~~-~------------------~-----~~~~-----------l~~~~-~~~~~~~~~~~a~~~ 324 (423)
++|.+|.+|-.+|.++.. . + +.+. ....+ ....+++.....+..
T Consensus 207 ~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~ 286 (427)
T PRK05994 207 LTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGLRDLGPAISPFNAFLILT 286 (427)
T ss_pred CccccCCCCCcEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCCHHHHHHHHc
Confidence 999887666555543331 1 0 1111 00011 112345544443333
Q ss_pred HhCChHHHHHHHHHHHHHHHHHHHHHccCCCC
Q 014492 325 ALQNPIYLEKVKEALIKERERLFKLLKDVPFL 356 (423)
Q Consensus 325 ~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 356 (423)
..+.+..+.++..++..++.+.|++.+.+
T Consensus 287 ---~l~tL~~r~~~~~~~a~~la~~L~~~p~v 315 (427)
T PRK05994 287 ---GIETLPLRMQRHSDNALAVAEWLKGHPKV 315 (427)
T ss_pred ---CcccHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 33446677777788888999999887654
No 239
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.85 E-value=8.2e-19 Score=175.58 Aligned_cols=320 Identities=13% Similarity=0.055 Sum_probs=213.0
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCCc----c------hH-HHHHHHHHHhCCCCCcEEEe---CCHHH
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQL-K--FPYIYPDP----E------SR-RLRAALAKDSGLESDHILVG---CGADE 157 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~Y~~~----g------~~-~lr~~ia~~~g~~~~~i~~t---~G~~~ 157 (423)
.+.|.|-.++|.. +|.+++++... . +..++|.. | .+ ..|+.+++++|.+++++.++ +|+++
T Consensus 34 ~~~l~l~~sen~~--s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~a~~~~~~~~~~~~sgt~ 111 (452)
T PTZ00094 34 IEGLELIASENFT--SRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFGLDPEEWGVNVQPYSGSP 111 (452)
T ss_pred HcCeeEecccccC--CHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhCCCcccceeecCCCchHH
Confidence 4568999989877 48888888763 1 11133321 1 12 25678999999988887666 78889
Q ss_pred HHHHHHHHhcCCCCeEEEcCCCchhhHHHHHH----------CCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCC
Q 014492 158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV----------NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSP 227 (423)
Q Consensus 158 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~----------~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p 227 (423)
++..++.+++++||+|++....|..+...+.. .+.+++.++.+.++.+|++++++.+.+.+++++++.
T Consensus 112 an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~id~~~L~~~l~~~~~~lvi~~-- 189 (452)
T PTZ00094 112 ANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEKGLIDYDKLEELAKAFRPKLIIAG-- 189 (452)
T ss_pred HHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCCCCCcCHHHHHHHHHHhCCCEEEEe--
Confidence 99999999999999999987777654332211 113344555555678999999999975578877764
Q ss_pred CCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHH
Q 014492 228 NNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW 306 (423)
Q Consensus 228 ~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~ 306 (423)
++.+|...|.+++.++|+. |+++++|++|........... .+..+..+++.|++|.++ |.+.|+++.++++.+.+.
T Consensus 190 ~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~-~~~~~~D~l~~S~hK~l~--GP~Gg~l~~~~~~~~~l~ 266 (452)
T PTZ00094 190 ASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLP-SPFPYADVVTTTTHKSLR--GPRSGLIFYRKKVKPDIE 266 (452)
T ss_pred CCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCC-CCCCCCcEEEcCCccCCC--CCCceEEEEecccchHHH
Confidence 3459999999999999997 999999999985443221111 011134588999999763 333488887765544332
Q ss_pred Hhc----CCC---CCcHHHHHHHHHHhCCh--HHHHHHHHHHHHHHHHHHHHHccCCCCee-cCC-CceEEEEEeC-CCC
Q 014492 307 RAK----QPY---NVSVAAEVAACAALQNP--IYLEKVKEALIKERERLFKLLKDVPFLNP-YPS-YSNFILCEVT-SGM 374 (423)
Q Consensus 307 ~~~----~~~---~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~-~~~~~~~~~~-~~~ 374 (423)
... .+. +.+.....++..+++.- ...++.++++.++++++.+.|++.+ +.+ .+. ......+.+. .+.
T Consensus 267 ~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~g-~~v~~~~~~~~~~~v~~~~~~~ 345 (452)
T PTZ00094 267 NKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKRG-YDLVTGGTDNHLVLVDLRPFGI 345 (452)
T ss_pred HhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhCC-cEEecCCCCCceEeecCCcCCC
Confidence 221 111 44555555556666542 2356778889999999999998764 333 221 1223444443 356
Q ss_pred CHHHHHHHHHhCCcEEEe-CCC----CCCCCeEEEEec---C----hhhHHHHHHHHhhh
Q 014492 375 DAKKLKDDLAKMGVMIRH-YNN----KELKGYVRVSVG---K----PEHTDALMECLMHL 422 (423)
Q Consensus 375 ~~~~l~~~L~~~gI~v~~-~~~----~~~~~~iRis~~---~----~~~~~~l~~al~~l 422 (423)
+..++...|.++||.+.. +.. ...+++||+++. + .+|++++.++|+++
T Consensus 346 ~~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~~ 405 (452)
T PTZ00094 346 TGSKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFLDRA 405 (452)
T ss_pred CHHHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHHHH
Confidence 788888888889999953 221 123579999973 2 67788888887754
No 240
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.85 E-value=1.3e-18 Score=173.44 Aligned_cols=327 Identities=16% Similarity=0.126 Sum_probs=206.9
Q ss_pred CCCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-CC---CCC--CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492 91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LK---FPY--IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (423)
Q Consensus 91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~---~~~--~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~ 161 (423)
..+++.+||+..+ ...++ .+|+|.+++.+ +. +.. .+..+...+|.+.++++++-..+.+++++++++++..
T Consensus 39 d~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGseA~e~ 118 (433)
T PRK08117 39 GVDGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGPSGVIYYESILKLAEELAEITPGGLDCFFFSNSGAEAIEG 118 (433)
T ss_pred eCCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHH
Confidence 3457789999877 33444 46888888876 22 111 2333445688888988874345689999999999999
Q ss_pred HHHHhc--CCCCeEEEcCCCchhhHHHHH-HCC-------------CeEEEecCCCCCC------------CCHHHHHHH
Q 014492 162 IMRCVL--DPGDKIVDCPPTFTMYEFDAA-VNG-------------AAVVKVPRKSDFS------------LNVELIADA 213 (423)
Q Consensus 162 ~~~~l~--~~gd~Vl~~~p~y~~~~~~~~-~~g-------------~~~~~v~~~~~~~------------~d~~~l~~~ 213 (423)
+++... .....|+...-+|+.....+. ..+ ..+..+|.++.+. .|++.+++.
T Consensus 119 AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 198 (433)
T PRK08117 119 ALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESL 198 (433)
T ss_pred HHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHH
Confidence 998421 123678888888875433321 111 0122333221111 145666766
Q ss_pred hhc----CCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhh
Q 014492 214 VER----EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKR 284 (423)
Q Consensus 214 i~~----~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~ 284 (423)
+++ .++.+|++.......|.+.+ .+++.++|+. |+++|+||+|.+|...+..... ...+...-+.++||.
T Consensus 199 ~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~-~~~gv~pDi~t~sK~ 277 (433)
T PRK08117 199 FKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAA-QTFGVVPDIMTIAKG 277 (433)
T ss_pred HHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchhH-hhcCCCCCEeehhhh
Confidence 542 46778888877888899887 6677777776 9999999999987544332211 112222234689999
Q ss_pred hcccCccccccccCHHHHHHHHHhc--CCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc----CCCCee
Q 014492 285 AGLAGLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKD----VPFLNP 358 (423)
Q Consensus 285 ~g~~G~R~G~i~~~~~~~~~l~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~ 358 (423)
+| +|+++|++++++++++.+.... ..++.+++++.++.++|+..+ .+...++++++.+++.+.|++ .+.+.-
T Consensus 278 lg-~G~pigav~~~~~i~~~~~~~~~~~T~~~np~~~aaa~a~L~~l~-~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~ 355 (433)
T PRK08117 278 IA-SGLPLSAVVASKELMEQWPLGSHGTTFGGNPVACAAALATLEVIK-EEKLLDNANEMGAYALERLEVLKEKHPVIGD 355 (433)
T ss_pred cc-CCCcceeEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHhcCCceee
Confidence 99 8999999999999988775332 235678999988888886421 123444555555556555544 332222
Q ss_pred cCCCceEEEEEeCCC------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 359 YPSYSNFILCEVTSG------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 359 ~p~~~~~~~~~~~~~------~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.+..|.++.+.+.+. .....+.+.+.++||.+.+... ..+++||++....+.+++.+++++|
T Consensus 356 vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~--~~~~lRl~p~~~~t~~~i~~~~~~l 423 (433)
T PRK08117 356 VRGIGLMIGIEIVDPDGEPDGDAVEKILDKCLEKGLLFYLCGN--AGNVLRMIPPLTVTKEEIDEGLDIL 423 (433)
T ss_pred eecCCcEEEEEEecCCCCcchHHHHHHHHHHHHCCCEEeecCC--CCCEEEEeCCccCCHHHHHHHHHHH
Confidence 456677777777421 2245677888899999876432 2579999975333345566555554
No 241
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.85 E-value=1.8e-18 Score=171.95 Aligned_cols=322 Identities=18% Similarity=0.192 Sum_probs=197.3
Q ss_pred CCCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-CCCCC----CC-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492 91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFPY----IY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (423)
Q Consensus 91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~~----~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~ 161 (423)
+.+++.++|+..+ ...++ .+|.+.+|+.+ +.... .| ..+...++-+.|++..+...+.++++++++++++.
T Consensus 37 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGsEAve~ 116 (443)
T PRK08360 37 DIEGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIHYTPIYGFPVEPLLLAEKLIEIAPGDNPKVSFGLSGSDANDG 116 (443)
T ss_pred ECCCCEEEEccccHhhcccCCCCHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCCCCEEEEcCCHHHHHHH
Confidence 3567889999877 44454 46888888876 22211 11 22234567777777765434689999999999999
Q ss_pred HHHHhc--CCCCeEEEcCCCchhhHHHH-HHCCC------------eEEEecCCCC----CC--------CCHHHHHHHh
Q 014492 162 IMRCVL--DPGDKIVDCPPTFTMYEFDA-AVNGA------------AVVKVPRKSD----FS--------LNVELIADAV 214 (423)
Q Consensus 162 ~~~~l~--~~gd~Vl~~~p~y~~~~~~~-~~~g~------------~~~~v~~~~~----~~--------~d~~~l~~~i 214 (423)
+++... .....|+.....|++....+ ...|. .+..+|.++. +. .+++.+++.+
T Consensus 117 AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 196 (443)
T PRK08360 117 AIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKF 196 (443)
T ss_pred HHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHH
Confidence 988432 22367887777776543221 11221 1233332111 11 1244566666
Q ss_pred hc----CCceEEEEcCCCCCcCcCCC-H---HHHHHHHcC-CCEEEEccCCccccCCCchh--hhhccCCcEEEEccChh
Q 014492 215 ER----EKPKCIFLTSPNNPDGSIIN-D---EDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSK 283 (423)
Q Consensus 215 ~~----~~~~~i~l~~p~NPtG~~~~-~---~~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~i~S~SK 283 (423)
.+ .++++|+++..+||+|.+++ . +++.++|+. |+++|+||+|..|...+... ...+..++++ ++||
T Consensus 197 ~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~~pDii---tlsK 273 (443)
T PRK08360 197 EGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGVEPDII---TLGK 273 (443)
T ss_pred HhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCCCCCEE---Eecc
Confidence 42 56889998866799999887 3 344455554 99999999999876443321 1222233433 6799
Q ss_pred hhcccCccccccccCHHHHHHHHHhc--CCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHc----cCCCCe
Q 014492 284 RAGLAGLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLK----DVPFLN 357 (423)
Q Consensus 284 ~~g~~G~R~G~i~~~~~~~~~l~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~----~~~~~~ 357 (423)
.++ +|+|+||+++++++++.+.... ..++.+++++.++.++|+.-+. +...++.+++.+++.+.|+ +.+.+.
T Consensus 274 ~l~-~G~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~l~~l~~-~~l~~~~~~~g~~l~~~L~~l~~~~~~v~ 351 (443)
T PRK08360 274 PLG-GGLPISATIGRAEIMDSLPPLAHAFTLSGNPVASAAALAVIEEIEE-KNLLKRAEKLGNYTKKRLEEMKKKHELIG 351 (443)
T ss_pred ccc-CCceeEEEEEcHHHHhhhcCCCCCCCCCcCHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 999 8999999999999998886443 2356788888888888864210 1233444444444444443 344333
Q ss_pred ecCCCceEEEEEeCCC--------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014492 358 PYPSYSNFILCEVTSG--------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH 421 (423)
Q Consensus 358 ~~p~~~~~~~~~~~~~--------~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~ 421 (423)
-....|.++.+++.+. ..+..+.+.|.++||++.+.. .+.+||++....+.++++++++.
T Consensus 352 ~vrg~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~----~~~lr~~P~l~~t~~~id~~~~~ 419 (443)
T PRK08360 352 DVRGIGLMIGVDLVKDRETKERAYEEAAKVVWRAWELGLIVTFFS----GNVLRIQPPLTIEKEVLDEGLDI 419 (443)
T ss_pred eeeccceEEEEEEecCCcccCccHHHHHHHHHHHHHCCeEEeecC----CCEEEEeCCCCCCHHHHHHHHHH
Confidence 3345677777776321 123567788889999987643 47899976633333444444433
No 242
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.84 E-value=2e-19 Score=170.11 Aligned_cols=199 Identities=19% Similarity=0.158 Sum_probs=157.2
Q ss_pred CCCCeeEcCCCCCCCCCCHHHHHHHhcCCC-----C-CC-CCC---cchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492 93 KPEDIVKIDANENPYGPPPEVREALGQLKF-----P-YI-YPD---PESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (423)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~~~-----~-~~-Y~~---~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~ 162 (423)
.+.+.++|+.+.. -+.++.|.+++.+... + .+ |.. .+.++.|+.+|+++|.++.+|+||+|+|++++++
T Consensus 40 ~~~~~vyld~~at-~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInAd~~dIiFts~ATEs~Nlv 118 (428)
T KOG1549|consen 40 HGTRPVYLDNQAT-GPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINADPSDIVFTSGATESNNLV 118 (428)
T ss_pred CCCccEEEecCcC-CCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhCCCCCcEEEeCCchHHHHHH
Confidence 3456688887543 2346889999887311 1 12 321 2367899999999999999999999999999999
Q ss_pred HHHhc-CCCC----eEEEcCCCchhhHHHH---HHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcC
Q 014492 163 MRCVL-DPGD----KIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI 234 (423)
Q Consensus 163 ~~~l~-~~gd----~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~ 234 (423)
++.+. ..+| +|++..-.|......+ +..|.+++.+|.++++..|++.+++.++ ++|+++.+.+.+|.+|++
T Consensus 119 l~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~~~~~d~~~~~~~i~-~~T~lv~I~~Vnn~~gv~ 197 (428)
T KOG1549|consen 119 LKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVEDSGLVDISKLREAIR-SKTRLVSIMHVNNEIGVL 197 (428)
T ss_pred HHHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccCccccccHHHHHHhcC-CCceEEEEEecccCcccc
Confidence 99874 3456 8998888887555444 4479999999988888999999999998 799999999999999999
Q ss_pred CCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCH
Q 014492 235 INDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299 (423)
Q Consensus 235 ~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~ 299 (423)
+|.+||.++|+. ++.+++|.+++-. ...-.+..-+..++..|.+|.||.+| +|++++.+
T Consensus 198 ~Pv~EI~~icr~~~v~v~~DaAQavG----~i~vDV~eln~D~~s~s~HK~ygp~~--iGaLYvr~ 257 (428)
T KOG1549|consen 198 QPVKEIVKICREEGVQVHVDAAQAVG----KIPVDVQELNADFLSISAHKIYGPPG--IGALYVRR 257 (428)
T ss_pred ccHHHHHHHhCcCCcEEEeehhhhcC----CccccHHHcCchheeeecccccCCCc--ceEEEEcc
Confidence 999999999998 9999999999832 22222334455678888999999999 89888875
No 243
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.84 E-value=1.2e-18 Score=173.19 Aligned_cols=320 Identities=17% Similarity=0.118 Sum_probs=206.3
Q ss_pred CCCCCeeEcCCCCCC--C-CCCHHHHHHHhc-CCCC--CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHH
Q 014492 92 RKPEDIVKIDANENP--Y-GPPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC 165 (423)
Q Consensus 92 ~~~~~~i~l~~~~~~--~-~~~~~v~~al~~-~~~~--~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~ 165 (423)
.+++.++|+..+... + ..+|.+.+++.+ +... ..++.+...+|.+.+++.+. ..+.+++++|+++++..+++.
T Consensus 47 ~dG~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~~~~~~~~~~~~~la~~L~~~~~-~~~~v~~~~sGseA~e~Aik~ 125 (426)
T PRK00062 47 VDGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEKGLSFGAPTELEVELAELVIELVP-SIEMVRMVNSGTEATMSAIRL 125 (426)
T ss_pred CCCCEEEEcccchhhhhcCCCCHHHHHHHHHHHHhCCcCCCCCHHHHHHHHHHHHhCC-CCCEEEEecCHHHHHHHHHHH
Confidence 456789999887532 3 357888888876 2221 22355566788899888764 356899999999999999996
Q ss_pred hcC--CCCeEEEcCCCchhhHHHHHHC-C------------CeEEEecCC--CCCCCCHHHHHHHhhc--CCceEEEEcC
Q 014492 166 VLD--PGDKIVDCPPTFTMYEFDAAVN-G------------AAVVKVPRK--SDFSLNVELIADAVER--EKPKCIFLTS 226 (423)
Q Consensus 166 l~~--~gd~Vl~~~p~y~~~~~~~~~~-g------------~~~~~v~~~--~~~~~d~~~l~~~i~~--~~~~~i~l~~ 226 (423)
... .++.|+...++|+.+...+... | .....++.. .-...|++++++.+.. .++.+|+++.
T Consensus 126 a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aaiivEp 205 (426)
T PRK00062 126 ARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDLEAVEELFEEYGDEIAAVIVEP 205 (426)
T ss_pred HHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCCHHHHHHHHHhCCCcEEEEEEeC
Confidence 433 2578999999998776333221 1 000000000 0001378899888853 4677888885
Q ss_pred CCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch-hhhhccCCcEEEEccChhhhcccCccccccccCHH
Q 014492 227 PNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR-MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS 300 (423)
Q Consensus 227 p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~-~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~ 300 (423)
....+|.+.+ .+++.+||+. |+++|+||+|..+..+... ....+..+. +.++||.++ .|+++|+++++++
T Consensus 206 v~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~~~~~~~~~~~pD---i~~~gK~l~-~G~p~ga~~~~~~ 281 (426)
T PRK00062 206 VAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVALGGAQGYYGVTPD---LTTLGKIIG-GGLPVGAFGGRRE 281 (426)
T ss_pred CcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCCccHHHHhCCCcc---hHhhhhHhh-CCCcceeeeEHHH
Confidence 5555899988 5666777766 9999999999877432211 111221122 468899998 8999999999999
Q ss_pred HHHHHHHhc-----CCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCC
Q 014492 301 IIEYLWRAK-----QPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS 372 (423)
Q Consensus 301 ~~~~l~~~~-----~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~ 372 (423)
+++.+.... ..++.+++.+.++.++|+. .+..++.++.....++.|.+.+++.+++.-..+.|.++.+.+.+
T Consensus 282 i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vrg~G~~~~i~l~~ 361 (426)
T PRK00062 282 IMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKEPGFYEELEALTKRLAEGLKEAAKKAGIPLTVNRVGSMFGLFFTD 361 (426)
T ss_pred HHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecceEEEEEec
Confidence 988875321 2356788888888877763 33455555555555666655555666554334566666665531
Q ss_pred C-C---------C---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHh
Q 014492 373 G-M---------D---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLM 420 (423)
Q Consensus 373 ~-~---------~---~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~ 420 (423)
. . + ...+.+.|.++||.+.+... +.+|+++. +.++.+++.+.++
T Consensus 362 ~~~~~~~~~~~~~~~~~~~i~~~l~~~Gv~v~~~~~----~~~~~~~~~t~~ei~~~~~~l~ 419 (426)
T PRK00062 362 EPVTNYADAKKSDTERFARFFHAMLDEGVYLAPSQF----EAGFVSAAHTDEDIEKTLEAAR 419 (426)
T ss_pred CCCcchhhhccccHHHHHHHHHHHHHCCeEeecCCc----CceeeeccCCHHHHHHHHHHHH
Confidence 1 0 1 35788888999999987542 34567654 3444555555544
No 244
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.84 E-value=8e-19 Score=173.53 Aligned_cols=243 Identities=14% Similarity=0.148 Sum_probs=170.0
Q ss_pred CCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHH----HHHCCCeEEEecCCC
Q 014492 126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRKS 201 (423)
Q Consensus 126 Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~~ 201 (423)
+.++...++++.+|++.|.+ ..++++++++|+.+++.+++++||+|+++...|...... ++..|++++.++.+
T Consensus 61 ~~~p~~~~le~~lA~l~g~~--~av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~- 137 (433)
T PRK08134 61 ISNPTVAVLEERVAALEGGV--GAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKPG- 137 (433)
T ss_pred CcChHHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECCC-
Confidence 45566789999999999964 368899999999999998999999999999999754332 34589999999853
Q ss_pred CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEcc
Q 014492 202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRT 280 (423)
Q Consensus 202 ~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S 280 (423)
|++++++.++ +++|+|++.+|+||+|.+.+.+++.++++. |+++|+|.++...... ... ..+..+++.|
T Consensus 138 ----d~~~l~~~i~-~~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~~~~~-~pl----~~GaD~vv~S 207 (433)
T PRK08134 138 ----DIDGWRAAIR-PNTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYLL-RPF----EHGADLVYHS 207 (433)
T ss_pred ----CHHHHHHhcC-CCCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCcccccC-Cch----hcCCCEEEec
Confidence 7999999997 689999999999999999999999999997 9999999998743221 111 3445699999
Q ss_pred ChhhhcccCccccccccC-HH--------------------------------HHHHHH-HhcC--CCCCcHHHHHHHHH
Q 014492 281 FSKRAGLAGLRVGYGAFP-LS--------------------------------IIEYLW-RAKQ--PYNVSVAAEVAACA 324 (423)
Q Consensus 281 ~SK~~g~~G~R~G~i~~~-~~--------------------------------~~~~l~-~~~~--~~~~~~~~~~a~~~ 324 (423)
.+|.+|..|-.+|.++.. .. +..+.+ .... ...+++.....
T Consensus 208 ~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ls~~~A~l--- 284 (433)
T PRK08134 208 ATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFAEESTVAAFLLRARREGLRDFGACLSPMNAWQ--- 284 (433)
T ss_pred cccccCCCCCceEEEEEecCccccccccccccccCCcccccccchhhccchhHHHHHHHHHHHHhcCCCCCHHHHHH---
Confidence 999887677555554331 10 000010 0001 12344444333
Q ss_pred HhCChHHHHHHHHHHHHHHHHHHHHHccCCCCe-e-cC-----------------CCceEEEEEeCCC-CCHHHHHHHHH
Q 014492 325 ALQNPIYLEKVKEALIKERERLFKLLKDVPFLN-P-YP-----------------SYSNFILCEVTSG-MDAKKLKDDLA 384 (423)
Q Consensus 325 ~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~p-----------------~~~~~~~~~~~~~-~~~~~l~~~L~ 384 (423)
.+...+.+..+.++..++..++.+.|++.+.+. + +| +.|..+.+++.++ .....|++.|.
T Consensus 285 ~~~gL~tl~~R~~~~~~nA~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~~g~gg~~s~~l~~~~~~~~~f~~~l~ 364 (433)
T PRK08134 285 LLQGIETLPLRMERHVANTRKVVAFLASHPAVARVAHPELESHPDHALAKRLLPRGAGSVFSFDLKGGRAAGRKFIESLK 364 (433)
T ss_pred HhcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEEecCCHHHHHHHHHhCC
Confidence 333334467777777888899999998876543 1 22 2355677888532 22445555553
No 245
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.84 E-value=2.3e-18 Score=169.52 Aligned_cols=322 Identities=14% Similarity=0.134 Sum_probs=202.8
Q ss_pred CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCCC-CC---CCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP-YI---YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (423)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~-~~---Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~ 162 (423)
..+++.+||+..+. ..++ .+|++.+++.+ +... +. +......++-+.+++..+. .+.++++++++++++.+
T Consensus 36 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~-~~~v~f~~sGseA~e~A 114 (408)
T PRK04612 36 DDQGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWHTSNVFYSAPPLKLAEELVTASRF-AEKVFLCNSGTEANEAA 114 (408)
T ss_pred ECCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhCCC-CCEEEEcCchHHHHHHH
Confidence 35678899997763 3344 46888888876 2211 11 2222234666666666542 36899999999999999
Q ss_pred HHHhc------C--CC-CeEEEcCCCchhhHHHHHH-CCCeEEE---ecCCCC----CCCCHHHHHHHhhcCCceEEEEc
Q 014492 163 MRCVL------D--PG-DKIVDCPPTFTMYEFDAAV-NGAAVVK---VPRKSD----FSLNVELIADAVEREKPKCIFLT 225 (423)
Q Consensus 163 ~~~l~------~--~g-d~Vl~~~p~y~~~~~~~~~-~g~~~~~---v~~~~~----~~~d~~~l~~~i~~~~~~~i~l~ 225 (423)
++... + ++ .+|+....+|++....+.. .|..... -|...+ ...|++.+++.+.. +..+.++.
T Consensus 115 lklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~aavi~ 193 (408)
T PRK04612 115 IKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMAG-GDVAAVML 193 (408)
T ss_pred HHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCHHHHHHhhCC-CCEEEEEE
Confidence 87432 1 12 4688888888755443322 2211110 111111 12378999998863 34455556
Q ss_pred CCCCCcCcCCC--HHHHH---HHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCH
Q 014492 226 SPNNPDGSIIN--DEDLL---KILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299 (423)
Q Consensus 226 ~p~NPtG~~~~--~~~l~---~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~ 299 (423)
.|.+++|-+++ .+.+. ++|+. |+++|+||+|..+...+..... ...+....+.+|||.++ +|+|+|++++++
T Consensus 194 eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~a~-~~~~~~pdi~t~~K~l~-~G~piga~~~~~ 271 (408)
T PRK04612 194 EPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLFAH-WQEQVTPDIVTLAKALG-GGFPIGAMLAGP 271 (408)
T ss_pred CCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchhhh-hhcCCCCCEEEEcchhc-CCCceEEEEECH
Confidence 67777886665 33444 45554 9999999999987654432222 12345567889999998 899999999999
Q ss_pred HHHHHHHHhc--CCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc----CCCCeecCCCceEEEEEeCC-
Q 014492 300 SIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKD----VPFLNPYPSYSNFILCEVTS- 372 (423)
Q Consensus 300 ~~~~~l~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~p~~~~~~~~~~~~- 372 (423)
++++.+.... ..|+.+++++.++.++|+.-+- ++..++.+++.+++.+.|++ .+.+.-..+.|.++.+.+..
T Consensus 272 ~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~~-~~l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~Gl~~~i~~~~~ 350 (408)
T PRK04612 272 KVAETMQFGAHGTTFGGNPLAAAVARVALRKLAS-PQIAANVARQSAALRAGLEALNAEFGVFAQVRGRGLMLGAVLAPA 350 (408)
T ss_pred HHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeccceEEEEEecCc
Confidence 8887765433 2367889999999888864221 24455555566666666554 34333345667888787742
Q ss_pred -CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014492 373 -GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH 421 (423)
Q Consensus 373 -~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~ 421 (423)
...+..+.+.+.++||++.+.+ .+.+|+.....-+.++++++++.
T Consensus 351 ~~~~a~~i~~~l~~~Gvlv~~~g----~~~lRl~Ppl~it~eeid~~l~~ 396 (408)
T PRK04612 351 HAGQAGAILDLAAEHGLLLLQAG----PDVLRFVPALNLTDAELADGLAR 396 (408)
T ss_pred hhhHHHHHHHHHHHCCeEEeeCC----CCEEEEcCCccCCHHHHHHHHHH
Confidence 1235678888899999998753 47899986532223445555444
No 246
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.84 E-value=2.3e-18 Score=159.06 Aligned_cols=308 Identities=17% Similarity=0.191 Sum_probs=209.4
Q ss_pred CCCCCCCCHHHHHHHhcCCC--CCCCCC-cchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCC
Q 014492 103 NENPYGPPPEVREALGQLKF--PYIYPD-PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179 (423)
Q Consensus 103 ~~~~~~~~~~v~~al~~~~~--~~~Y~~-~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~ 179 (423)
++|.-++.|+++++|.+.+. ...|++ +...++++.+++.+|. +.++|++++|++..+++.+.++||+.|++..-.
T Consensus 6 SDn~~g~~~~m~eam~~a~~~~~~~YG~D~~~~~~e~~~ae~~g~--~a~~Fv~sGT~aN~lal~~~~~~~~~vi~~~~a 83 (342)
T COG2008 6 SDNVAGPTPEMREALAAANAVGDDVYGEDPTTNALEQRIAELFGK--EAALFVPSGTQANQLALAAHCQPGESVICHETA 83 (342)
T ss_pred cCccCCCCHHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHHhCC--ceEEEecCccHHHHHHHHHhcCCCCeEEEeccc
Confidence 46777899999999998652 356854 4678999999999996 788888888999999999999999999998888
Q ss_pred chh---hHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcC-----CceEEEEcCCCCCcCcCCCHHHHHHHHcC----C
Q 014492 180 FTM---YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEM----P 247 (423)
Q Consensus 180 y~~---~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~ 247 (423)
|.. ........++..+.+....+..+++++++..+... .+.++++.+.+|.-|+++|+++|++|.+. |
T Consensus 84 Hi~~~E~Ga~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~~k~~~ 163 (342)
T COG2008 84 HIYTDECGAPEFFGGGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVCKEHG 163 (342)
T ss_pred cceecccCcHHHHcCCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHHHHHhC
Confidence 842 11222334455555554466799999999987632 24455555666688999999999998775 9
Q ss_pred CEEEEccCCcccc--CCCchhhhhccCCcEEEEccChhhhcccCcccc-ccccCHHHHHHHHHhcCC----CCCcHHHHH
Q 014492 248 ILVVLDEAYTEFS--GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVG-YGAFPLSIIEYLWRAKQP----YNVSVAAEV 320 (423)
Q Consensus 248 ~~li~Deay~~~~--~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G-~i~~~~~~~~~l~~~~~~----~~~~~~~~~ 320 (423)
+.|.+|.+-..-. ..+........+-. ++..++||..+.++ | .++++.++++++...+.. +.-..+...
T Consensus 164 l~LHmDGAR~~nA~valg~~~~~~~~~~D-~v~~~~tK~g~~~~---gAiv~gn~~~~~~a~~~rK~~Ggl~~k~r~laA 239 (342)
T COG2008 164 LPLHMDGARLANALVALGVALKTIKSYVD-SVSFCLTKGGGAPV---GAIVFGNRDFAKRARRWRKRAGGLMRKARFLAA 239 (342)
T ss_pred CceeechHHHHHHHHHcCCCHHHHHhhCC-EEEEecccCCccee---eeEEEcCHHHHHHHHHHHHHhcccHhhhhHHHH
Confidence 9999999865321 11122222223322 44456789877665 5 455688988877654432 344566677
Q ss_pred HHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCC
Q 014492 321 AACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELK 399 (423)
Q Consensus 321 a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~ 399 (423)
+...+|++.-|... ..+-.++..+|.+.|+..+++.+ .|..+|.+++++++ ...+.|.+.|.....+-.-...
T Consensus 240 ~~~~~l~~~~~~~~-~~Han~mA~~La~~~~~~~G~~~~~~~~tN~vf~~l~~-----~~i~~l~~~~~~~~~~~~~~~~ 313 (342)
T COG2008 240 QGLYALEDDVWRLA-ADHANAMAARLAEGLEAKPGVKLAFPVETNMVFVRLPE-----SAIEALRLAGALFYRGVLIGAH 313 (342)
T ss_pred HHHHHHhccHHHHH-HHHHHHHHHHHHHhhhhcCCceeccCCcccEEEEECCh-----HHHHHHHhhchhheeeeeccCC
Confidence 77788887655333 33334568889999987766664 56899999999972 2224555445444432221111
Q ss_pred -CeEEEEec---ChhhHHHHHHHHhhh
Q 014492 400 -GYVRVSVG---KPEHTDALMECLMHL 422 (423)
Q Consensus 400 -~~iRis~~---~~~~~~~l~~al~~l 422 (423)
..+|+..+ +.++.+++...++.+
T Consensus 314 ~~~vRfvts~a~~~edv~~~~~~~~~~ 340 (342)
T COG2008 314 GEIVRFVTSWATSEEDVDELVAAIKAL 340 (342)
T ss_pred CceEEEEeeccCCHHHHHHHHHHHHHh
Confidence 47899876 455666666666554
No 247
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.84 E-value=1.6e-18 Score=171.26 Aligned_cols=243 Identities=15% Similarity=0.118 Sum_probs=168.3
Q ss_pred CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHH----HHHHCCCeEEEecCCCC
Q 014492 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRKSD 202 (423)
Q Consensus 127 ~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~~~ 202 (423)
.++....|++.++++.|.+ ..+++++++.|+..++.+++++||+|++....|..... .+...|++++.++ +.
T Consensus 67 ~~p~~~~Le~~lA~l~g~~--~av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-d~- 142 (436)
T PRK07812 67 MNPTQDVVEQRIAALEGGV--AALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE-DP- 142 (436)
T ss_pred CCchHHHHHHHHHHHhCCC--eEEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEEC-CC-
Confidence 3566789999999999964 35666677789999999999999999999988865432 3345788888885 21
Q ss_pred CCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccC
Q 014492 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF 281 (423)
Q Consensus 203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~ 281 (423)
.|+++++++++ +++++|++.+|+||+|.+.+.+++.++++. |+++|+|+++..... ... + ..+..+++.|+
T Consensus 143 --~d~e~l~~ai~-~~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~~-~~p---l-~~GaDivv~S~ 214 (436)
T PRK07812 143 --DDLDAWRAAVR-PNTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPYL-IRP---L-EHGADIVVHSA 214 (436)
T ss_pred --CCHHHHHHhCC-CCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc-CCc---h-hcCCCEEEEec
Confidence 38999999997 689999999999999999999999999998 999999999874221 111 1 23445888999
Q ss_pred hhhhcccCccccccccC-HH------------------------------HHHHHH---HhcCCCCCcHHHHHHHHHHhC
Q 014492 282 SKRAGLAGLRVGYGAFP-LS------------------------------IIEYLW---RAKQPYNVSVAAEVAACAALQ 327 (423)
Q Consensus 282 SK~~g~~G~R~G~i~~~-~~------------------------------~~~~l~---~~~~~~~~~~~~~~a~~~~l~ 327 (423)
+|.+|..|--+|.++.. .. ++.+.. .......+++..... +++
T Consensus 215 tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l---~~r 291 (436)
T PRK07812 215 TKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQLLRDLGSAISPFNAFL---IAQ 291 (436)
T ss_pred ccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHH---Hhc
Confidence 99987666556655542 11 000111 111123445544433 333
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHccCCCCe--ecC-----------------CCceEEEEEeCCC-CCHHHHHHHHH
Q 014492 328 NPIYLEKVKEALIKERERLFKLLKDVPFLN--PYP-----------------SYSNFILCEVTSG-MDAKKLKDDLA 384 (423)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~--~~p-----------------~~~~~~~~~~~~~-~~~~~l~~~L~ 384 (423)
..+.+..+.++..++..++.+.|++.+.+. .+| +.|..+.+++.++ .....|++.|.
T Consensus 292 gl~tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~ 368 (436)
T PRK07812 292 GLETLSLRIERHVANAQRVAEFLEARDEVASVNYAGLPSSPWYERAKRLAPKGTGAVLSFELAGGVEAGKAFVNALT 368 (436)
T ss_pred CcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHhCC
Confidence 334467777778889999999999877553 233 2355677787532 22455666654
No 248
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.84 E-value=1.7e-18 Score=168.13 Aligned_cols=216 Identities=11% Similarity=0.024 Sum_probs=164.5
Q ss_pred CCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHH----HHHCCCeEEEecCCC
Q 014492 126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRKS 201 (423)
Q Consensus 126 Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~~ 201 (423)
..+|....|++.++++-|- +..+++++++.|+..++.+++++||+|+++...|...... ++..|+++..++.
T Consensus 59 ~~nPt~~~le~~la~LEg~--~~a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~-- 134 (395)
T PRK08114 59 RGTLTHFSLQEAMCELEGG--AGCALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDP-- 134 (395)
T ss_pred CCChhHHHHHHHHHHHhCC--CeEEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECC--
Confidence 3566778999999998873 5677778899999999999999999999999999654443 4568999999873
Q ss_pred CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC---CCEEEEccCCccccCCCchhhhhccCCcEEEE
Q 014492 202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (423)
Q Consensus 202 ~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i 278 (423)
.|.++++++++ +++|+|++.+|.||+|.+.|++++.++++. |+++++|.++.-... -.+ ...+-.+++
T Consensus 135 ---~d~~~l~~~l~-~~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~-~~p----l~~GaDivv 205 (395)
T PRK08114 135 ---LIGADIAKLIQ-PNTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTWAAGVL-FKA----LDFGIDISI 205 (395)
T ss_pred ---CCHHHHHHhcC-CCceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCCccccc-cCH----HHcCCcEEE
Confidence 46789999997 689999999999999999999999999987 499999999974322 111 134566999
Q ss_pred ccChhhhcccC-ccccccccCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCC
Q 014492 279 RTFSKRAGLAG-LRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPF 355 (423)
Q Consensus 279 ~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 355 (423)
.|.+|.++..| .-.|.++.+++..+.+...... ..+++.....+..- .+.+.-+.++..++...+.+.|++.+.
T Consensus 206 ~S~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~~~~~G~~~~p~~a~l~~rg---l~TL~lR~~~~~~na~~va~~L~~hp~ 282 (395)
T PRK08114 206 QAGTKYLVGHSDAMIGTAVANARCWEQLRENSYLMGQMVDADTAYMTSRG---LRTLGVRLRQHEESSLKVAEWLAEHPE 282 (395)
T ss_pred EcCcccccCCCcceeEEEEcCHHHHHHHHHHHHhccCCCCHHHHHHHHcC---CCcHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999776554 5678777777776666543322 23455554433333 344667778888999999999998765
Q ss_pred Ce
Q 014492 356 LN 357 (423)
Q Consensus 356 ~~ 357 (423)
+.
T Consensus 283 V~ 284 (395)
T PRK08114 283 VA 284 (395)
T ss_pred Ee
Confidence 43
No 249
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.83 E-value=1.7e-18 Score=183.93 Aligned_cols=320 Identities=15% Similarity=0.094 Sum_probs=213.7
Q ss_pred CeeEcCCCCCCCCCCHHHHHHHhcC-C----CCC-CCCCc-----chHHHHHHHHHHhCCCCC--cEEEeCCHHHHHHHH
Q 014492 96 DIVKIDANENPYGPPPEVREALGQL-K----FPY-IYPDP-----ESRRLRAALAKDSGLESD--HILVGCGADELIDLI 162 (423)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~-~----~~~-~Y~~~-----g~~~lr~~ia~~~g~~~~--~i~~t~G~~~al~~~ 162 (423)
++++|+.+.....++..+.+++..+ . ..+ .|... ..++.|+.+++++|.+++ .|++|+|++++++++
T Consensus 34 ~~iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~alnlv 113 (805)
T PLN02724 34 GVVYLDHAGATLYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATAALKLV 113 (805)
T ss_pred CCEeEeCCCCCCCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHHHHHHH
Confidence 3689998876654445566655432 1 111 12111 256899999999999765 589999999999999
Q ss_pred HHHh-cCCCCeEEEcCCCchhhH---HHHHHCCCeEEEecCC--------CCCCCCH--HHHHHHhh---------cCCc
Q 014492 163 MRCV-LDPGDKIVDCPPTFTMYE---FDAAVNGAAVVKVPRK--------SDFSLNV--ELIADAVE---------REKP 219 (423)
Q Consensus 163 ~~~l-~~~gd~Vl~~~p~y~~~~---~~~~~~g~~~~~v~~~--------~~~~~d~--~~l~~~i~---------~~~~ 219 (423)
+..+ +++||+|++..-.|.... ..++..|+++..++.+ ....+++ +++++.++ ..++
T Consensus 114 a~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t 193 (805)
T PLN02724 114 GETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAY 193 (805)
T ss_pred HHHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhccccccCCCc
Confidence 9987 678999999777775333 3445579999998864 2223333 55666531 1456
Q ss_pred eEEEEcCCCCCcCcCCCHHHHHHHHcC---------CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhc-ccC
Q 014492 220 KCIFLTSPNNPDGSIINDEDLLKILEM---------PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG-LAG 289 (423)
Q Consensus 220 ~~i~l~~p~NPtG~~~~~~~l~~i~~~---------~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g-~~G 289 (423)
++|.+++.+|.||.++|++++.++++. ++++++|.++..... ...+...+-.+++.|+.|.+| ..|
T Consensus 194 ~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~----piDv~~~~~Dfl~~S~HK~~GgP~G 269 (805)
T PLN02724 194 NLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTS----PPDLSRYPADFVVVSFYKIFGYPTG 269 (805)
T ss_pred ceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCC----CCChhhcCCCEEEEecceeccCCCC
Confidence 899999999999999999988777663 257999999873321 112233455689999999877 335
Q ss_pred ccccccccCHHHHHHHHHhc--------------------------CCCCCcHHHHHHHHHHhCCh-H-HHHHHHHHHHH
Q 014492 290 LRVGYGAFPLSIIEYLWRAK--------------------------QPYNVSVAAEVAACAALQNP-I-YLEKVKEALIK 341 (423)
Q Consensus 290 ~R~G~i~~~~~~~~~l~~~~--------------------------~~~~~~~~~~~a~~~~l~~~-~-~~~~~~~~~~~ 341 (423)
+|+++++++..+.+.... ...+++..+..++.++++.. + .+++..++.++
T Consensus 270 --~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~ig~~~I~~~~~~ 347 (805)
T PLN02724 270 --LGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKLLNRLTISAIAMHTWA 347 (805)
T ss_pred --ceEEEEehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHHHHHhChHHHHHHHHH
Confidence 799988888776554211 11245555555666666432 1 25677888999
Q ss_pred HHHHHHHHHccCC------CCeecCC---------CceEEEEEeCC--C--CCHHHHHHHHHhCCcEEEeCCCC------
Q 014492 342 ERERLFKLLKDVP------FLNPYPS---------YSNFILCEVTS--G--MDAKKLKDDLAKMGVMIRHYNNK------ 396 (423)
Q Consensus 342 ~~~~l~~~L~~~~------~~~~~p~---------~~~~~~~~~~~--~--~~~~~l~~~L~~~gI~v~~~~~~------ 396 (423)
+.+++.+.|++++ .+.++.. .+..+.+.+.. + +...++...+.++||.++.|...
T Consensus 348 L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~l~~~~gI~vR~G~~Ca~~~~~ 427 (805)
T PLN02724 348 LTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREVEKLASLSGIQLRTGCFCNPGACA 427 (805)
T ss_pred HHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHHHHHHHhcCcEEeeccccCchHHH
Confidence 9999999998875 3555421 23455555542 1 23444555445889999976541
Q ss_pred ----------------------------C-CCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 397 ----------------------------E-LKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 397 ----------------------------~-~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
+ ..+.||+|++ +.+|.++|.++|++
T Consensus 428 ~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~ 484 (805)
T PLN02724 428 KYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIIS 484 (805)
T ss_pred HHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHH
Confidence 0 1388999986 67788888888875
No 250
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.83 E-value=4e-18 Score=168.89 Aligned_cols=325 Identities=14% Similarity=0.137 Sum_probs=204.4
Q ss_pred CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCCC--CC---CCCcchHHHHHHHHHHhCC-CCCcEEEeCCHHHHHH
Q 014492 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP--YI---YPDPESRRLRAALAKDSGL-ESDHILVGCGADELID 160 (423)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~--~~---Y~~~g~~~lr~~ia~~~g~-~~~~i~~t~G~~~al~ 160 (423)
+.+++.++|+..+. ..++ .+|++.+++.+ +... .. ++.+...++-+.+++.... ..+.++++++++++++
T Consensus 36 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e 115 (421)
T PRK06777 36 DVEGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTHTAYQIVPYASYVTLAERINALAPIDGPAKTAFFTTGAEAVE 115 (421)
T ss_pred eCCCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhcccccccccCChHHHHHHHHHHHhCCCCCCceEEEeCCcHHHHH
Confidence 45678899997763 3343 46888888876 2211 11 2333345677777777642 2468999999999999
Q ss_pred HHHHHhc--CCCCeEEEcCCCchhhHHHHHH-CCC-------------eEEEecCCCC-CC----CCHHHHHHHhhc---
Q 014492 161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKSD-FS----LNVELIADAVER--- 216 (423)
Q Consensus 161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g~-------------~~~~v~~~~~-~~----~d~~~l~~~i~~--- 216 (423)
.+++... ....+|+....+|++....+.. .|. .+..+|.++. .. .+++.+++.+.+
T Consensus 116 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~ 195 (421)
T PRK06777 116 NAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIA 195 (421)
T ss_pred HHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhccC
Confidence 9988432 1235788888888765544332 121 0122221111 11 236667777642
Q ss_pred -CCceEEEEcCCCCCcCc-CCCHHHHHHHHc---C-CCEEEEccCCccccCCCchh--hhhccCCcEEEEccChhhhccc
Q 014492 217 -EKPKCIFLTSPNNPDGS-IINDEDLLKILE---M-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLA 288 (423)
Q Consensus 217 -~~~~~i~l~~p~NPtG~-~~~~~~l~~i~~---~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~i~S~SK~~g~~ 288 (423)
.++.+|++...++..|. +.+.+.+++|.+ . |+++|+||+|..|...+... ...+..+.+ .++||.++ +
T Consensus 196 ~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~pDi---v~~sK~l~-~ 271 (421)
T PRK06777 196 PDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDVKPDL---ITMAKSLG-G 271 (421)
T ss_pred CCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCchhhhhhcCCCCCE---Eeeehhhc-C
Confidence 46788888877888886 577666655544 4 99999999999876544321 112222332 36899999 9
Q ss_pred CccccccccCHHHHHHHHHhc--CCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccC----CCCeecCCC
Q 014492 289 GLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDV----PFLNPYPSY 362 (423)
Q Consensus 289 G~R~G~i~~~~~~~~~l~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~p~~ 362 (423)
|+|+||+++++++++.+.... ..++.+++++.++.++|+..+. +...++++++.+++.+.|+++ +.+....+.
T Consensus 272 G~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~-~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~ 350 (421)
T PRK06777 272 GMPISAVVGRAEVMDAPAPGGLGGTYAGNPLAVAAALAVLDVIAE-EKLCQRALILGAHLVEVLEKAKASCPAIVDIRAR 350 (421)
T ss_pred CCceEEEEEcHHHHhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCc
Confidence 999999999999988775432 3467899999999999864221 355666677777777777653 443333455
Q ss_pred ceEEEEEeCC---CCC----HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 363 SNFILCEVTS---GMD----AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 363 ~~~~~~~~~~---~~~----~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
|.++.+.+.. +.+ ...+.+.+.++||++.+++.+ .+++||++...-+.+++.+++++|
T Consensus 351 G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~~--g~~lr~~ppl~i~~~~i~~~~~~l 415 (421)
T PRK06777 351 GSMVAVEFNDPQTGKPSPEFTRQYQRQALEEGLLLLSCGVH--GNVIRFLYPLTIPDAQFSKALNIL 415 (421)
T ss_pred eEEEEEEEecCccCCccHHHHHHHHHHHHhCCeEEeecCCC--CCEEEEeCCCCCCHHHHHHHHHHH
Confidence 5555555532 111 234455567899999887533 369999985333345666666654
No 251
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=99.83 E-value=5.6e-18 Score=151.62 Aligned_cols=298 Identities=16% Similarity=0.211 Sum_probs=211.5
Q ss_pred HHHHHHHhcC----CCCCCC-CCcchHHHHHHHHHHh-C-----CCCCcEE--EeCCHHHHHHHHHH---HhcCCCCeEE
Q 014492 111 PEVREALGQL----KFPYIY-PDPESRRLRAALAKDS-G-----LESDHIL--VGCGADELIDLIMR---CVLDPGDKIV 174 (423)
Q Consensus 111 ~~v~~al~~~----~~~~~Y-~~~g~~~lr~~ia~~~-g-----~~~~~i~--~t~G~~~al~~~~~---~l~~~gd~Vl 174 (423)
|.|.++-..+ ...+.| |-.|.+.++++.++.. | +..++++ -+-|++.|+.+... .++. ..+|.
T Consensus 51 PvVk~~e~~i~~d~s~NHEYLpi~Gl~~F~~~A~el~lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~-~~~VY 129 (410)
T KOG1412|consen 51 PVVKKAEKKIANDQSLNHEYLPILGLPTFTKAATELLLGADSPAIKEDRVFGVQSLSGTGALRIAADFLATFYN-KNTVY 129 (410)
T ss_pred hhhhhhhhhccCchhccchhccccCchhhhhhhHHHhcCCCchhhhhccccceeeccccchhhhhHHHHHHhcc-cceeE
Confidence 5555444332 344778 7789999999888874 4 2334432 33445556655544 3343 46799
Q ss_pred EcCCCchhhHHHHHHCC-CeEEEecC--CCCCCCCHHHHHHHhhcCCceEEEEc-C-CCCCcCcCCCHHHHHHHHcC---
Q 014492 175 DCPPTFTMYEFDAAVNG-AAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLT-S-PNNPDGSIINDEDLLKILEM--- 246 (423)
Q Consensus 175 ~~~p~y~~~~~~~~~~g-~~~~~v~~--~~~~~~d~~~l~~~i~~~~~~~i~l~-~-p~NPtG~~~~~~~l~~i~~~--- 246 (423)
+.+|+|..+...++..| .++..++. .++-.+|++.+...++....+.|++. . .+||||.-.+.|++.+|++.
T Consensus 130 ~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~ 209 (410)
T KOG1412|consen 130 VSNPTWENHHAIFEKAGFTTVATYPYWDAENKCVDLEGFLSDLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKS 209 (410)
T ss_pred ecCCchhHHHHHHHHcCCceeeeeeeecCCCceecHHHHHHHHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHh
Confidence 99999999999999999 56667773 34557999999999975555555555 3 38999999999999999985
Q ss_pred -CCEEEEccCCccccCCCch------hhhhccCCcEEEEccChhhhcccCcccccccc---CHHHHHHH----HHhcC--
Q 014492 247 -PILVVLDEAYTEFSGLESR------MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF---PLSIIEYL----WRAKQ-- 310 (423)
Q Consensus 247 -~~~li~Deay~~~~~~~~~------~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~---~~~~~~~l----~~~~~-- 310 (423)
+.+.+.|-+|.+|+.+... ...+.....++++.||+|.||+.|-|+|-+.. ++..+..+ ....+
T Consensus 210 k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~ 289 (410)
T KOG1412|consen 210 KNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSN 289 (410)
T ss_pred cCceeeeehhhcccccCCccccHHHHHHHHhcCCeEEEEhhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhc
Confidence 8999999999999865422 22344556689999999999999999996543 45554433 33322
Q ss_pred CCCCcHHHHHHHHHHhCCh----HH---HHHHHHHHHHHHHHHHHHHccCC----CCeecCCCceEEEEEeCCCCCHHHH
Q 014492 311 PYNVSVAAEVAACAALQNP----IY---LEKVKEALIKERERLFKLLKDVP----FLNPYPSYSNFILCEVTSGMDAKKL 379 (423)
Q Consensus 311 ~~~~~~~~~~a~~~~l~~~----~~---~~~~~~~~~~~~~~l~~~L~~~~----~~~~~p~~~~~~~~~~~~~~~~~~l 379 (423)
..+++..+...+...|+.+ +| +..+-.+++++|..|++.|..++ |..+..+.|+|.+- |.+...+
T Consensus 290 ~SNPPAyGArIV~kvL~tP~lre~W~~sik~MssRI~~MR~aLrd~L~aL~TPGtWDHI~~QiGMFSyT----GLtp~qV 365 (410)
T KOG1412|consen 290 WSNPPAYGARIVHKVLSTPELREQWIQSIKTMSSRIKKMRTALRDHLVALKTPGTWDHITQQIGMFSYT----GLTPAQV 365 (410)
T ss_pred cCCCcchhhHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHhhccceeec----CCCHHHH
Confidence 2467777888888999875 34 44566788999999999988763 44566778888876 4456666
Q ss_pred HHHHHhCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhh
Q 014492 380 KDDLAKMGVMIRHYNNKELKGYVRVSVG--KPEHTDALMECLMH 421 (423)
Q Consensus 380 ~~~L~~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~ 421 (423)
-....+++|++...+ ||+++ .....|.+.++++.
T Consensus 366 ~~li~~h~vyLl~~G--------RInisGLN~~NveyVAkAIde 401 (410)
T KOG1412|consen 366 DHLIENHKVYLLSDG--------RINISGLNMKNVEYVAKAIDE 401 (410)
T ss_pred HHHHHhceEEEecCC--------cEeeeccccccHHHHHHHHHH
Confidence 555558899998876 89886 34456777777754
No 252
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.83 E-value=2.7e-18 Score=152.86 Aligned_cols=309 Identities=19% Similarity=0.205 Sum_probs=215.1
Q ss_pred eeEcCCCCCCCCCCHHHHHHHhcCCCC-CCC-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEE
Q 014492 97 IVKIDANENPYGPPPEVREALGQLKFP-YIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIV 174 (423)
Q Consensus 97 ~i~l~~~~~~~~~~~~v~~al~~~~~~-~~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl 174 (423)
.+||.+ +.-..|..+++++|.+...+ ..| .|+...+|++.+|+.+| +...+++++|+...+-.++.-+-++|.+|+
T Consensus 23 ~vDLRS-DTvT~PTdeMr~am~eA~vgDdVyGeD~tt~rLE~~vA~l~G-KEAgLFv~SGTmgNllaIm~Hc~~rg~eii 100 (384)
T KOG1368|consen 23 SVDLRS-DTVTVPTDEMRRAMAEASVGDDVYGEDPTTNRLEQRVAELFG-KEAGLFVPSGTMGNLLAIMVHCHQRGSEII 100 (384)
T ss_pred cccccc-ccccCChHHHHHHHhhcccCcccccCCccHHHHHHHHHHHhC-ccceeeecccccccHHHHHHHhcCCCceEE
Confidence 456654 33345568899999886443 456 45677899999999999 455778888887666555555556999999
Q ss_pred EcCCCch-hhH--HHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-------CCceEEEEcCCCCCcC-cCCCHHHHHHH
Q 014492 175 DCPPTFT-MYE--FDAAVNGAAVVKVPRKSDFSLNVELIADAVER-------EKPKCIFLTSPNNPDG-SIINDEDLLKI 243 (423)
Q Consensus 175 ~~~p~y~-~~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-------~~~~~i~l~~p~NPtG-~~~~~~~l~~i 243 (423)
+.+-+|- .|+ ......|+.+.++..+++..+|++++++++.. +.+++|.+.|-+|-+| .++|++++.++
T Consensus 101 ~gd~~HI~~~E~gg~s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v 180 (384)
T KOG1368|consen 101 VGDRAHIHRYEQGGISQLAGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRV 180 (384)
T ss_pred eccchheeehhccChhhhccceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHH
Confidence 9988873 333 34556899999999888889999999999973 2478999998877677 99999988776
Q ss_pred HcC----CCEEEEccCCcccc---CCCchhhhhccCCcEEEEccChhhhcccCcccc-ccccCHHHHHHHHHhcCC----
Q 014492 244 LEM----PILVVLDEAYTEFS---GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVG-YGAFPLSIIEYLWRAKQP---- 311 (423)
Q Consensus 244 ~~~----~~~li~Deay~~~~---~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G-~i~~~~~~~~~l~~~~~~---- 311 (423)
.++ |+.+.+|.+..+-+ .+-+.-..+...|.+-+| |||.+|.| +| .++++++++++....+..
T Consensus 181 ~~lak~~glkLH~DGARi~NAavasgV~vk~i~~~fDSVsiC--LSKglgAP---VGSViVG~k~FI~kA~~~RKalGGG 255 (384)
T KOG1368|consen 181 KALAKRHGLKLHMDGARIFNAAVASGVPVKKICSAFDSVSIC--LSKGLGAP---VGSVIVGSKDFIDKARHFRKALGGG 255 (384)
T ss_pred HHHHhccCCeeecchhhhhhHHHHcCCCHHHHHHhhhhhhhh--hhccCCCC---cccEEEccHHHHHHHHHHHHHhcCc
Confidence 553 99999999876432 111222222333444344 78988754 56 566799999887765443
Q ss_pred CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCee--cCCCceEEEEEeCC-CCCHHHHHHHHHhCCc
Q 014492 312 YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNP--YPSYSNFILCEVTS-GMDAKKLKDDLAKMGV 388 (423)
Q Consensus 312 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~p~~~~~~~~~~~~-~~~~~~l~~~L~~~gI 388 (423)
+..+....+|+..+|++. | . ..++-+++...+.+.++..+.+.+ ...+.|++.+.+.. ..+++++++.+.++||
T Consensus 256 mRQsGvLaaaaLval~~~-~-~-~L~~dHk~A~~lAe~~~~~~~i~v~v~a~etNiv~~~l~q~~~~~~~l~~~~~k~gi 332 (384)
T KOG1368|consen 256 MRQSGVLAAAALVALDEN-V-P-LLRADHKRAKELAEYINTPEEIRVEVPAVETNIVNMVLCQARLTAEELCKFLEKNGI 332 (384)
T ss_pred hhHHHHHHHHHHHHhhcc-h-H-HHHHHHHHHHHHHHHhccccceeeecchhhcceeeeecccccCCHHHHHHHHHHCCe
Confidence 334566666666666542 1 2 223334555566667776665543 33678898877643 6789999999999999
Q ss_pred EEEeCCCCCCCCeEEEEec---ChhhHHHHHHHH
Q 014492 389 MIRHYNNKELKGYVRVSVG---KPEHTDALMECL 419 (423)
Q Consensus 389 ~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al 419 (423)
.+..+.. ..+||.+- +.++.|.+...+
T Consensus 333 ~lm~~~s----~r~Rivlh~Qvt~~~ve~~~~~~ 362 (384)
T KOG1368|consen 333 LLMGGAS----RRIRIVLHHQVTDEDVEYVKSVL 362 (384)
T ss_pred EEeeccc----cceEEEEEEecCHHHHHHHHHHH
Confidence 9998763 45899985 455566666665
No 253
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.82 E-value=9.6e-18 Score=164.71 Aligned_cols=318 Identities=15% Similarity=0.076 Sum_probs=208.4
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhcC---CCCCCC------CCcc-hH----HHHHHHHHHhCCCCCcEEEeCCHHHHHH
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQL---KFPYIY------PDPE-SR----RLRAALAKDSGLESDHILVGCGADELID 160 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~---~~~~~Y------~~~g-~~----~lr~~ia~~~g~~~~~i~~t~G~~~al~ 160 (423)
.+.|.|-.+||-. +|.+.+++... .+..+| +... .. -..+...+.||.+..+|-.-+|+. ++.
T Consensus 49 ~~~l~LiasEN~~--s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~a~~anvqp~Sg~~-An~ 125 (493)
T PRK13580 49 RSSLKLIASENYS--SLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFGAEHAYVQPHSGAD-ANL 125 (493)
T ss_pred hcCceEecccccC--CHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhCCCcccccCCCcHH-HHH
Confidence 4458888888876 58888888762 222223 2221 22 244555567898888888888886 555
Q ss_pred HHHHHhcCC-------------------------------CCeEEEcCCCchhhHH---HHHHCC--CeEEEecCC-CCC
Q 014492 161 LIMRCVLDP-------------------------------GDKIVDCPPTFTMYEF---DAAVNG--AAVVKVPRK-SDF 203 (423)
Q Consensus 161 ~~~~~l~~~-------------------------------gd~Vl~~~p~y~~~~~---~~~~~g--~~~~~v~~~-~~~ 203 (423)
.++.++++| ||+|+..++....+.. .....| .+.+.++.+ ++.
T Consensus 126 ~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~~g 205 (493)
T PRK13580 126 VAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDPDTG 205 (493)
T ss_pred HHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEecccCcccC
Confidence 677778876 7999987666642211 111122 345555554 356
Q ss_pred CCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhh-hh-ccCCcEEEEcc
Q 014492 204 SLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRME-WV-KKHDNLIVLRT 280 (423)
Q Consensus 204 ~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~-~~-~~~~~~i~i~S 280 (423)
.+|++++++.+. .+++.|++++.+|- |...|.+++.+||+. |+++++|++|.....+..... .. ...+..++++|
T Consensus 206 ~iD~d~l~~~~~-~~~plvii~g~S~~-~~~~dl~~i~eia~~~gA~L~VD~AH~~Gligg~~~~~~~~~~~~~D~vtgT 283 (493)
T PRK13580 206 LLDYDEIAALAR-EFKPLILVAGYSAY-PRRVNFAKLREIADEVGAVLMVDMAHFAGLVAGKVFTGDEDPVPHADIVTTT 283 (493)
T ss_pred ccCHHHHHHHHh-hcCCEEEEeCcccc-CCCcCHHHHHHHHHHcCCEEEEECchhhceeccccchhhcCCCCCCcEEEeC
Confidence 799999999997 56667777877776 558899999999987 999999999986543221110 00 11234589999
Q ss_pred ChhhhcccCccccccccCHHHHHHHHHhcCCC---CCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCC
Q 014492 281 FSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY---NVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVP 354 (423)
Q Consensus 281 ~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~---~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~ 354 (423)
++|++ .|-+.|++++++++++.+.+.. ++ +..++...++..++.. +++ .+.++++.++.++|.+.|.+.+
T Consensus 284 ~hKaL--~GP~GG~I~~~~~l~~~L~~a~-P~i~gg~l~p~iAA~avAl~e~~~~ef-~~y~~~l~~Na~~La~~L~~~G 359 (493)
T PRK13580 284 THKTL--RGPRGGLVLAKKEYADAVDKGC-PLVLGGPLPHVMAAKAVALAEARTPEF-QKYAQQVVDNARALAEGFLKRG 359 (493)
T ss_pred Chhhc--cCCCeEEEEecHHHHHHHhhCC-CcccCCCccHHHHHHHHHHHHHhCccH-HHHHHHHHHHHHHHHHHHHhcC
Confidence 99987 2344599999999998885443 32 2222233333333322 222 5678899999999999999887
Q ss_pred CCeec-CCCceEEEEEeCCCC-CHHHHHHHHHhCCcEEEeCCC---CCC---CCeEEEEecC-------hhhHHHHHHHH
Q 014492 355 FLNPY-PSYSNFILCEVTSGM-DAKKLKDDLAKMGVMIRHYNN---KEL---KGYVRVSVGK-------PEHTDALMECL 419 (423)
Q Consensus 355 ~~~~~-p~~~~~~~~~~~~~~-~~~~l~~~L~~~gI~v~~~~~---~~~---~~~iRis~~~-------~~~~~~l~~al 419 (423)
+-.+. .+.+..+++.+.+.. +...+.+.|.+.||.+..... +.. ...|||++.. .++++++.+.|
T Consensus 360 ~~vv~ggTdshIV~V~lg~~~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~A~ttrg~teedi~~iad~l 439 (493)
T PRK13580 360 ARLVTGGTDNHLVLIDVTSFGLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVAELI 439 (493)
T ss_pred CCccCCCCCCCEEEEEeCCHHHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccchhhhcCCCHHHHHHHHHHH
Confidence 54332 245678888886322 234566788899999985443 222 5789999754 56677777776
Q ss_pred hh
Q 014492 420 MH 421 (423)
Q Consensus 420 ~~ 421 (423)
.+
T Consensus 440 ~~ 441 (493)
T PRK13580 440 VK 441 (493)
T ss_pred HH
Confidence 54
No 254
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.82 E-value=1.3e-18 Score=168.95 Aligned_cols=303 Identities=15% Similarity=0.094 Sum_probs=200.6
Q ss_pred CCCCCCCHHHHHHHhcCC-----CCC-CC------CC--cchHHHHHHHHHHhCC-CCCcEEEeCC-HHHHHHHHHHHhc
Q 014492 104 ENPYGPPPEVREALGQLK-----FPY-IY------PD--PESRRLRAALAKDSGL-ESDHILVGCG-ADELIDLIMRCVL 167 (423)
Q Consensus 104 ~~~~~~~~~v~~al~~~~-----~~~-~Y------~~--~g~~~lr~~ia~~~g~-~~~~i~~t~G-~~~al~~~~~~l~ 167 (423)
..|...|+.|++++.+.- .+. .| +. .-..+.|+.++++++. ++++|++|+| +|++++.++..++
T Consensus 5 pGp~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~ 84 (355)
T cd00611 5 AGPAALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLL 84 (355)
T ss_pred CCCCCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcC
Confidence 345567899999987621 111 11 11 1256899999999997 5678999988 9999999999998
Q ss_pred C---CCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCC-C-HHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHH
Q 014492 168 D---PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSL-N-VELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK 242 (423)
Q Consensus 168 ~---~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~-d-~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~ 242 (423)
. +||.|+. .|........++..|++++.++.++++.+ + ++..+..+. +++++|.+++..|.||..++ +
T Consensus 85 ~~~~~~~~i~~-g~~~~~~~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~lV~~~h~~t~tG~~~~-----~ 157 (355)
T cd00611 85 GDKGTADYVVT-GAWSAKAAKEAKRYGGVVVIVAAKEEGKYTKIPDVETWDLA-PDAAYVHYCSNETIHGVEFD-----E 157 (355)
T ss_pred CCCCeEEEEEC-CHHHHHHHHHHHhcCCCcEEEecccccCCCCCCCHhhcCCC-CCCCEEEEeCCcccccEEcc-----e
Confidence 7 4454443 33223334467788999988886543222 3 233333344 68999999999999999743 4
Q ss_pred HHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHh-------c-----
Q 014492 243 ILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA-------K----- 309 (423)
Q Consensus 243 i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~-------~----- 309 (423)
+++. |+++++|.+++..... -.. ...+ +.+.|..|.+|.+| +|+++++++.++++... .
T Consensus 158 i~~~~g~~~~VDa~qs~g~~~-idv---~~~~--~~~ss~~K~lGP~G--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (355)
T cd00611 158 VPDTGGVPLVADMSSNILSRP-IDV---SKFG--VIYAGAQKNLGPAG--VTVVIVRKDLLGKARKITPSMLNYKTHADN 229 (355)
T ss_pred ecccCCCeEEEEccccccCCC-CCH---HHhC--EEEeecccccCCCc--eEEEEECHHHHhhcccCCCCcccHHHHHhc
Confidence 5555 9999999999844321 111 1222 45566799998777 68899988887654321 0
Q ss_pred --CCCCCcHHHHHHHHHHhCC--hH-HHHHHHHHHHHHHHHHHHHHccCCCCe-e-cC--CCc-eEEEEEeCCCCCHHHH
Q 014492 310 --QPYNVSVAAEVAACAALQN--PI-YLEKVKEALIKERERLFKLLKDVPFLN-P-YP--SYS-NFILCEVTSGMDAKKL 379 (423)
Q Consensus 310 --~~~~~~~~~~~a~~~~l~~--~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~p--~~~-~~~~~~~~~~~~~~~l 379 (423)
..+++|.....++.++++. .. .++.+.++.+++.+++++.|++++++. . .+ ... ..+.+.+++.....++
T Consensus 230 ~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~vvsf~~~~~~l~~~~ 309 (355)
T cd00611 230 NSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMNVPFRLGKEELEKEF 309 (355)
T ss_pred CCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcCceEEEEEcCChhhhHHH
Confidence 1245666666766666654 22 378889999999999999999995442 1 11 122 3466666521112455
Q ss_pred HHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhhC
Q 014492 380 KDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHLY 423 (423)
Q Consensus 380 ~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l~ 423 (423)
.+.+.++|+....+.. ..+.+|+|+. +.+|+++|.++|++++
T Consensus 310 ~~~~~r~G~~~~~~~~--~~g~vR~S~~~~nt~edi~~l~~al~~~~ 354 (355)
T cd00611 310 LKEAEAAGMIGLKGHR--SVGGIRASIYNALSLEGVQALADFMKEFQ 354 (355)
T ss_pred HHHHHHCCCcccCCCc--ccCeEEEEccCCCCHHHHHHHHHHHHHHh
Confidence 5667789997444432 3478999975 6778888888888763
No 255
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.82 E-value=4.9e-18 Score=168.50 Aligned_cols=248 Identities=17% Similarity=0.078 Sum_probs=173.8
Q ss_pred chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh---------cCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC
Q 014492 130 ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV---------LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK 200 (423)
Q Consensus 130 g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l---------~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~ 200 (423)
...+|++++++++|.+ ++++++|+++++..++.++ ++|||+|+++.++|..+...+...|++++.++.+
T Consensus 64 ~~~~fe~~lA~~~g~~--~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdvd 141 (438)
T PRK15407 64 FNDAFEKKLAEFLGVR--YALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDVE 141 (438)
T ss_pred hHHHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecC
Confidence 3678999999999964 6889999999999988866 4789999999999999999999999999999975
Q ss_pred -CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCcccc-CCCchhhhhccCCcEEE
Q 014492 201 -SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLESRMEWVKKHDNLIV 277 (423)
Q Consensus 201 -~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~-~~~~~~~~~~~~~~~i~ 277 (423)
.++.+|++.+++.+. +++++|++++ ++|...+.+++.++|+. |++||+|++|+.+. +.+...... + .+.
T Consensus 142 ~~~~~id~~~le~~i~-~~tkaVi~~~---~~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G~~---g-d~~ 213 (438)
T PRK15407 142 LPTYNIDASLLEAAVS-PKTKAIMIAH---TLGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYDGRMTGTF---G-DIA 213 (438)
T ss_pred CCcCCcCHHHHHHHcC-cCCeEEEEeC---CCCChhhHHHHHHHHHHCCCEEEEECccchhhhcCCeeeecc---C-ceE
Confidence 568899999999997 6899999886 46777899999999987 99999999998654 222222222 2 255
Q ss_pred EccC--hhhhcccCccccccccCH-HHHHHHHHhcCC-----------------------------------------CC
Q 014492 278 LRTF--SKRAGLAGLRVGYGAFPL-SIIEYLWRAKQP-----------------------------------------YN 313 (423)
Q Consensus 278 i~S~--SK~~g~~G~R~G~i~~~~-~~~~~l~~~~~~-----------------------------------------~~ 313 (423)
+.|| +|.+. .|- -|+++.++ ++.+++...+.. +.
T Consensus 214 ~fSf~~~k~~~-~ge-GG~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~r 291 (438)
T PRK15407 214 TLSFYPAHHIT-MGE-GGAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNLK 291 (438)
T ss_pred EEeCCCCCCcc-ccC-ceEEEECCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccccccC
Confidence 6666 46564 343 48888854 444444332110 11
Q ss_pred CcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCC-Cee--cCCCc---eEE-EEEeCC--CCCHHHHHHHHH
Q 014492 314 VSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPF-LNP--YPSYS---NFI-LCEVTS--GMDAKKLKDDLA 384 (423)
Q Consensus 314 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~--~p~~~---~~~-~~~~~~--~~~~~~l~~~L~ 384 (423)
++.+..+.+..- .+.+++..++-+++.+++.+.|.+++. +.. .+.+. .|. .+.+++ +.+.+++.+.|.
T Consensus 292 msel~AAig~~q---L~~l~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Rd~l~~~L~ 368 (438)
T PRK15407 292 ITDMQAAIGLAQ---LEKLPGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPITVKEDAGFTRVELVKYLE 368 (438)
T ss_pred ccHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEECCcCCCCHHHHHHHHH
Confidence 222222322222 244566666667778888888887653 221 12222 222 244432 456899999999
Q ss_pred hCCcEEEe
Q 014492 385 KMGVMIRH 392 (423)
Q Consensus 385 ~~gI~v~~ 392 (423)
++||..+.
T Consensus 369 ~~GI~~~~ 376 (438)
T PRK15407 369 ENKIGTRL 376 (438)
T ss_pred HCCCCccc
Confidence 99998763
No 256
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.82 E-value=3.4e-18 Score=157.68 Aligned_cols=340 Identities=16% Similarity=0.114 Sum_probs=230.4
Q ss_pred CCCchhHHHHhcccCCCCCCCc---hHHHHHHhCC------C-CCCe-eEcCCCCCCCCCCHHHHHHHhcC-C-CCCCC-
Q 014492 61 LTGDSFIRSHLRKLKPYQPILP---FEVLSIQLGR------K-PEDI-VKIDANENPYGPPPEVREALGQL-K-FPYIY- 126 (423)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~------~-~~~~-i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Y- 126 (423)
.+++.|+++-+.+-+.-...+. +..++.++.. . ..++ ++.++.+-.+..+|+|.+|+.+. + ++.+-
T Consensus 127 F~Yd~ff~~~i~kKk~DhsYRvFk~vNRlA~~fP~A~~~se~t~k~VtVWCSNDYLgms~Hp~V~~A~~~tl~~hG~GAG 206 (570)
T KOG1360|consen 127 FDYDRFFREEIDKKKRDHSYRVFKNVNRLAKEFPLAHRYSEATEKKVTVWCSNDYLGMSRHPEVLDAMHDTLDRHGAGAG 206 (570)
T ss_pred ccHHHHHHHHHHhhhccchhHHHHHHhHhhhhccchhhccccccCceEEEecCccccccCChHHHHHHHHHHHHcCCCcC
Confidence 4677888877755443333332 3333333221 1 1222 34444455667899999999873 2 22111
Q ss_pred ------CCc-chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh--cCCCCeEEEcCCCchhhHHHHHHCCCeEEEe
Q 014492 127 ------PDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV--LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKV 197 (423)
Q Consensus 127 ------~~~-g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v 197 (423)
+.. -..+|++.+|++++ ++..+++++.-. +.+..+..| .-||-.|....-.|.......+..++.-+.+
T Consensus 207 GTRNIsG~s~~hv~LE~eLA~LHq-K~aALlFsSCfV-ANDstLftLak~lpgcei~SD~gNHASMI~GIrns~v~K~IF 284 (570)
T KOG1360|consen 207 GTRNISGHSKHHVRLEAELADLHQ-KEAALLFSSCFV-ANDSTLFTLAKKLPGCEIFSDEGNHASMIQGIRNSRVPKHIF 284 (570)
T ss_pred CccccCCCCchhhhHHHHHHHHhc-Ccceeeeeeeee-ccchHHHHHHHHCCCcEEeccccchHHHHHHhhhcCCcceee
Confidence 111 13589999999998 344455544332 222222223 2378888888888888888778777766655
Q ss_pred cCCCCCCCCHHHHHHHhhc---CCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhc---
Q 014492 198 PRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVK--- 270 (423)
Q Consensus 198 ~~~~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~--- 270 (423)
. .-|++.|++.+.. ..||+|-..+.+.++|.+-|++||.++++. |.+-++||+|+-..+++......+
T Consensus 285 r-----HND~~hL~~lL~~~~~svPKivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdG 359 (570)
T KOG1360|consen 285 R-----HNDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDG 359 (570)
T ss_pred c-----cCCHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCC
Confidence 4 3366777776643 568999999999999999999999999998 999999999987665543222111
Q ss_pred -cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCC----CCcHHHHHHHHHHhCChH--HHHHHHHHHHHHH
Q 014492 271 -KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY----NVSVAAEVAACAALQNPI--YLEKVKEALIKER 343 (423)
Q Consensus 271 -~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~----~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~ 343 (423)
.+...|+.+++.|+||+-| |||.+...+++.++.+...| ++++.....+.++++... .-...++..+++-
T Consensus 360 vm~kvDiIsGTLgKafGcVG---GYIAat~~LvDmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv 436 (570)
T KOG1360|consen 360 VMHKVDIISGTLGKAFGCVG---GYIAATRKLVDMIRSYAAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNV 436 (570)
T ss_pred cchhhhhcccchhhhccccc---ceehhhhhHHHHHHHhcCceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 2344688999999999999 99999999999999887653 466666666665554321 1245566667888
Q ss_pred HHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHH-hCCcEEEeCCC---CCCCCeEEEEecChhh
Q 014492 344 ERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-KMGVMIRHYNN---KELKGYVRVSVGKPEH 411 (423)
Q Consensus 344 ~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~-~~gI~v~~~~~---~~~~~~iRis~~~~~~ 411 (423)
.++++.|.+++ +.+.|..+.++-+++.+..-+.++++.|. ++||+|-.... ..+...+||+.+....
T Consensus 437 ~~~kq~l~~~G-iPVi~~pSHIiPv~vgda~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT 507 (570)
T KOG1360|consen 437 KYVKQLLMELG-IPVIPNPSHIIPVRVGDAALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHT 507 (570)
T ss_pred HHHHHHHHHcC-CcccCCCcceeeeeccCHHHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCC
Confidence 89999999887 45566677788888865556778888887 89999986554 5667789999875443
No 257
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.82 E-value=2.8e-18 Score=152.41 Aligned_cols=312 Identities=18% Similarity=0.174 Sum_probs=210.7
Q ss_pred CCeeEcCCC-CCCCCCCHHHHHHHhcC--CCCCC-----C--CCcc-hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492 95 EDIVKIDAN-ENPYGPPPEVREALGQL--KFPYI-----Y--PDPE-SRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (423)
Q Consensus 95 ~~~i~l~~~-~~~~~~~~~v~~al~~~--~~~~~-----Y--~~~g-~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~ 163 (423)
..+++|+.| +-.+..+|++.++-.++ .++.+ + +... ...|+..||++.+- .|.| +.+..-.+...++
T Consensus 67 k~ilnFcaNnYLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh~r-ED~i-lypscfdANag~f 144 (417)
T KOG1359|consen 67 KKILNFCANNYLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQFHGR-EDTI-LYPSCFDANAGAF 144 (417)
T ss_pred cceeeecccccccccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHHhCC-CceE-EeccccccchHHH
Confidence 567888765 44567789998776652 12211 1 1112 35799999999983 3444 4555556777788
Q ss_pred HHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhh---cCCceEEEEcCCCCCcCcCCCHHHH
Q 014492 164 RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE---REKPKCIFLTSPNNPDGSIINDEDL 240 (423)
Q Consensus 164 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~---~~~~~~i~l~~p~NPtG~~~~~~~l 240 (423)
.+++.|.|.|+.....|.......+.+. .-..+|+-.++..+. +.+.|+|+......+.|.+.|.+++
T Consensus 145 eail~pedAvfSDeLNhASIIdGirLck---------ry~h~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGdiaPl~ei 215 (417)
T KOG1359|consen 145 EAILTPEDAVFSDELNHASIIDGIRLCK---------RYRHVDVFDLEHCLISACKMRLKLVVTDGVFSMDGDIAPLEEI 215 (417)
T ss_pred HHhcChhhhhhccccccchhhhhhHHHh---------hhccchhHHHHHHHHHhhhheEEEEEecceeccCCCcccHHHH
Confidence 8899999999999888987776655543 112456666665443 2567888877999999999999999
Q ss_pred HHHHcC-CCEEEEccCCccccCCCch---hhhh-ccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCC---
Q 014492 241 LKILEM-PILVVLDEAYTEFSGLESR---MEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY--- 312 (423)
Q Consensus 241 ~~i~~~-~~~li~Deay~~~~~~~~~---~~~~-~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~--- 312 (423)
.+|++. |.++++||+|.-+.++... ...+ ...+..++.++++|++| |.--||..+|+.+++-++...++|
T Consensus 216 ~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlG--ga~GGyttgp~~li~llrqr~RpylFS 293 (417)
T KOG1359|consen 216 SQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALG--GASGGYTTGPKPLISLLRQRSRPYLFS 293 (417)
T ss_pred HHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhc--CCCCCCccCChhHHHHHHhcCCceeec
Confidence 999998 9999999999876543322 1122 23566788899999986 333499999999999999888874
Q ss_pred -CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEE
Q 014492 313 -NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIR 391 (423)
Q Consensus 313 -~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~ 391 (423)
++++.....+..++.-.-.-.+...+.+.+.+++++..+..++ .+.........+-+.+..-+..+.++|++.||.|-
T Consensus 294 nslppavV~~a~ka~dllm~s~~~i~~~~a~~qrfr~~me~aGf-tIsg~~hPI~pv~lGda~lA~~~ad~lLk~Gi~Vi 372 (417)
T KOG1359|consen 294 NSLPPAVVGMAAKAYDLLMVSSKEIQSRQANTQRFREFMEAAGF-TISGASHPICPVMLGDARLASKMADELLKRGIYVI 372 (417)
T ss_pred CCCChhhhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCc-eecCCCCCccceecccHHHHHHHHHHHHhcCceEE
Confidence 3443322223333321111234445556677778887776664 33333345555666544557788899999999998
Q ss_pred eCCC---CCCCCeEEEEec---ChhhHHHHHHHHh
Q 014492 392 HYNN---KELKGYVRVSVG---KPEHTDALMECLM 420 (423)
Q Consensus 392 ~~~~---~~~~~~iRis~~---~~~~~~~l~~al~ 420 (423)
.+++ +.+...||+.++ ++++++++.+++.
T Consensus 373 gfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~ 407 (417)
T KOG1359|consen 373 GFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFS 407 (417)
T ss_pred eecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHH
Confidence 8777 556678999887 4555666666654
No 258
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.82 E-value=4.1e-18 Score=166.80 Aligned_cols=300 Identities=12% Similarity=0.067 Sum_probs=202.2
Q ss_pred CCCCCCHH-HHHHHhcCCC--CCCCCCc--chHHHHHHHHHHhCCC-CCcEEEeC-CHHHHHHHHHHHhcCC-CCeEEEc
Q 014492 105 NPYGPPPE-VREALGQLKF--PYIYPDP--ESRRLRAALAKDSGLE-SDHILVGC-GADELIDLIMRCVLDP-GDKIVDC 176 (423)
Q Consensus 105 ~~~~~~~~-v~~al~~~~~--~~~Y~~~--g~~~lr~~ia~~~g~~-~~~i~~t~-G~~~al~~~~~~l~~~-gd~Vl~~ 176 (423)
.+...+|. |++++..... .++-+.. -..+.|+.++++++.+ +++|++++ |++.+++.++..++++ ++.|+.
T Consensus 19 Gp~~~~~~~v~~a~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l~~~~~~~vi~- 97 (378)
T PRK03080 19 GPCKKRPGWQLEALADALLGRSHRQKPVKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSLLGARRVDHLA- 97 (378)
T ss_pred CCcCCChHHHHHHHHhhhcccCcCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhcCCCCcceEEE-
Confidence 34555677 8899876321 2333332 2678999999999984 45788875 8999999999999875 444444
Q ss_pred CCCchh-hHH-HHHHCCC-eEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcCCCEEEEc
Q 014492 177 PPTFTM-YEF-DAAVNGA-AVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLD 253 (423)
Q Consensus 177 ~p~y~~-~~~-~~~~~g~-~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~li~D 253 (423)
.-.|+. +.. .++..|+ +++.++.+.+..+|+++++ .++.|.+++..|.||..+|.+++.+ .+.|+++++|
T Consensus 98 ~g~f~~~~~~~~~~~~g~~~v~~~~~~~g~~~d~~~i~------~~~~V~~~h~~t~tG~~~pi~~I~~-~~~g~~~vVD 170 (378)
T PRK03080 98 WESFGSKWATDVVKQLKLEDPRVLEADYGSLPDLSAVD------FDRDVVFTWNGTTTGVRVPVARWIG-ADREGLTICD 170 (378)
T ss_pred eCHHHHHHHHHHHhhcCCCCceEeccCCCCCCCHhhcC------CCCCEEEEecCCccceeccchhhcc-ccCCCeEEEe
Confidence 456653 222 2356788 8888887666678877632 2567889999999999999999888 3349999999
Q ss_pred cCCccccCCCchhhhhccCCcEEEEccChhhhcc-cCccccccccCHHHHHHHHHhc----------------------C
Q 014492 254 EAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGL-AGLRVGYGAFPLSIIEYLWRAK----------------------Q 310 (423)
Q Consensus 254 eay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~-~G~R~G~i~~~~~~~~~l~~~~----------------------~ 310 (423)
.+++.....-. ... -.+++.|..|.++. +| +|+++.+++.++++.... .
T Consensus 171 a~qs~G~~pid-v~~-----iD~~~~s~~K~l~~P~G--~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (378)
T PRK03080 171 ATSAAFALPLD-WSK-----LDVYTFSWQKVLGGEGG--HGMAILSPRAVERLESYTPARPIPKFFRLTKGGKAIENSFK 242 (378)
T ss_pred cccccccCCCC-HHH-----CcEEEEehhhhCCCCCc--eEEEEECHHHHHhhhcccCCCCCchhheeccchHHhhhhhc
Confidence 99885442111 111 24888999998753 45 799999988887655311 0
Q ss_pred ---CCCCcHHHHHHHHHHhCC--hH-HHHHHHHHHHHHHHHHHHHHccCCCCeec---CC--CceEEEEEeCC---CCCH
Q 014492 311 ---PYNVSVAAEVAACAALQN--PI-YLEKVKEALIKERERLFKLLKDVPFLNPY---PS--YSNFILCEVTS---GMDA 376 (423)
Q Consensus 311 ---~~~~~~~~~~a~~~~l~~--~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~---p~--~~~~~~~~~~~---~~~~ 376 (423)
+++++..+..++.++|+. .. .++.+.++.+++.+++++.|++++++.+. +. .+..+.+.+++ +. .
T Consensus 243 ~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~~~~~-~ 321 (378)
T PRK03080 243 GQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVDAQAAV-D 321 (378)
T ss_pred CCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEEEEEcCCchHHH-H
Confidence 122344444444444443 12 36788889999999999999988865443 21 22356667764 22 3
Q ss_pred HHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 377 KKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 377 ~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
.++...|.++||.++.+......+.+|||+. +.++.+.+.++|+.
T Consensus 322 ~~~~~~l~~~~i~v~~g~~~~~~~~vRis~~~~~t~~di~~l~~al~~ 369 (378)
T PRK03080 322 AAAVAKLLRENGAVDIEPYRDAPNGLRIWCGPTVEPADVEALTPWLDW 369 (378)
T ss_pred HHHHHHHHHcCCeeccccccCCCCcEEEecCCCCCHHHHHHHHHHHHH
Confidence 3466777777998887553223578999975 56677777777765
No 259
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.82 E-value=4.6e-17 Score=145.97 Aligned_cols=308 Identities=14% Similarity=0.069 Sum_probs=223.4
Q ss_pred CCCCHHHHHHHhcCCCCCCCCCc-c-hHHHHHHHHHHhCCC-CCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcC-CCch-
Q 014492 107 YGPPPEVREALGQLKFPYIYPDP-E-SRRLRAALAKDSGLE-SDHILVGCGADELIDLIMRCVLDPGDKIVDCP-PTFT- 181 (423)
Q Consensus 107 ~~~~~~v~~al~~~~~~~~Y~~~-g-~~~lr~~ia~~~g~~-~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~-p~y~- 181 (423)
...++.|.+|+..-..++..|+. . ..++++-+...|... +.-.++...++.+++.++..+++|||.|++.. -.|.
T Consensus 26 snl~~~V~~A~~~~~lgh~sPe~~qIm~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~wg~ 105 (385)
T KOG2862|consen 26 SNLSGRVQEAMSRPSLGHMSPEFVQIMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNLLEPGDNVLVVSTGTWGQ 105 (385)
T ss_pred cCCCHHHHHhhcCCccccCCHHHHHHHHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhhcCCCCeEEEEEechHHH
Confidence 33467888888875444555553 2 567888888888653 34556666677899999999999999988654 4554
Q ss_pred hhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCC-HHHHHHHHcC-CCEEEEccCCccc
Q 014492 182 MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN-DEDLLKILEM-PILVVLDEAYTEF 259 (423)
Q Consensus 182 ~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~-~~~l~~i~~~-~~~li~Deay~~~ 259 (423)
.+..+++.+|++|..|+.+.+....++.+.+.+.+++++++++++....||+..+ .+.+.++|+. ++++++|.+-+-.
T Consensus 106 ra~D~~~r~ga~V~~v~~~~G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~VaSlg 185 (385)
T KOG2862|consen 106 RAADCARRYGAEVDVVEADIGQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQDLLAISGELCHKHEALLLVDTVASLG 185 (385)
T ss_pred HHHHHHHhhCceeeEEecCcccCccHHHHHHHHHhcCCceEEEEecCccccccchHHHHHHHHhhcCCeEEEEechhhcC
Confidence 6677889999999999988888999999999999899999999999999999999 7778889988 9999999987633
Q ss_pred cCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC--------------C-----------CCC
Q 014492 260 SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--------------P-----------YNV 314 (423)
Q Consensus 260 ~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~--------------~-----------~~~ 314 (423)
... ...+.++..+....--|++|.| -.++.+.+++...++++..+. + .++
T Consensus 186 gt~----F~mDewgVDvaytgSQKaL~aP-~GLsiisfS~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~ 260 (385)
T KOG2862|consen 186 GTE----FEMDEWGVDVAYTGSQKALGAP-AGLSIISFSDKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTP 260 (385)
T ss_pred Ccc----ceehhhcccEEEecchhhcCCC-CCcceeecCHHHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCC
Confidence 211 1123444455555557998754 224557778888887775443 1 245
Q ss_pred cHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCe--e--cCCCceEEEEEeCCCCCHHHHHHHHHhC-C
Q 014492 315 SVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLN--P--YPSYSNFILCEVTSGMDAKKLKDDLAKM-G 387 (423)
Q Consensus 315 ~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~--~--~p~~~~~~~~~~~~~~~~~~l~~~L~~~-g 387 (423)
+....+.+.++|.. ++.+++..++.+++.+++...|++++.-. + .+.--.--.+.+|.+.|-.++..++.++ +
T Consensus 261 pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e~~rlptvttv~vp~gvDw~dVv~~~~~~~~ 340 (385)
T KOG2862|consen 261 PVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQLFVVDEELRLPTVTTVKVPYGVDWKDVVAYAMSHYV 340 (385)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceecChhhccCcceeeecCCCCCHHHHHHHHHHhcC
Confidence 66677777777765 57789999999999999999999876322 1 1112223457888899999999999966 5
Q ss_pred cEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHH
Q 014492 388 VMIRHYNNKELKGYVRVSVG-KPEHTDALMECL 419 (423)
Q Consensus 388 I~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al 419 (423)
+.+..+-.+..+..+||.+. .....+.++..+
T Consensus 341 vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~ 373 (385)
T KOG2862|consen 341 VEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVV 373 (385)
T ss_pred EEeccccCCCcccEEEEEEeeccCCcHHHHHHH
Confidence 55544444667789999863 333334444433
No 260
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.82 E-value=9.5e-18 Score=167.76 Aligned_cols=325 Identities=16% Similarity=0.109 Sum_probs=189.2
Q ss_pred CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCCC-C----CCCCcchHHHHHHHHHHhCCCC-CcEEEeCCHHHHHH
Q 014492 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP-Y----IYPDPESRRLRAALAKDSGLES-DHILVGCGADELID 160 (423)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~-~----~Y~~~g~~~lr~~ia~~~g~~~-~~i~~t~G~~~al~ 160 (423)
+.+++.+||+..+. ..+| .+|.+.+++.+ +... + .+..+...++-+.+++..+-.. +.++++++++++++
T Consensus 50 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~~v~f~~sGseA~e 129 (451)
T PRK06918 50 DVDGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIHTGFNVMMYEPYIELAEKLAALAPGSFDKKVLFLNSGAEAVE 129 (451)
T ss_pred eCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHhccCccccccccHHHHHHHHHHHHhCCCCCCCEEEEcCCcHHHHH
Confidence 45678899997773 3343 46888888876 2211 1 1223334567777777765322 58999999999999
Q ss_pred HHHHHhc--CCCCeEEEcCCCchhhHHHHHHC-CC-------------eEEEecCCCC----CCCC--------HHHHHH
Q 014492 161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAVN-GA-------------AVVKVPRKSD----FSLN--------VELIAD 212 (423)
Q Consensus 161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~-g~-------------~~~~v~~~~~----~~~d--------~~~l~~ 212 (423)
.+++... ....+|+....+|++....+... |. .+..+|..+. .+.. ++.+++
T Consensus 130 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (451)
T PRK06918 130 NAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKN 209 (451)
T ss_pred HHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHH
Confidence 9988432 22357888888887554433221 11 1223332110 1111 123333
Q ss_pred Hh----hcCCceEEEEcCCCCCcCcCCC-HHHHHHHHc---C-CCEEEEccCCccccCCCchh--hhhccCCcEEEEccC
Q 014492 213 AV----EREKPKCIFLTSPNNPDGSIIN-DEDLLKILE---M-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTF 281 (423)
Q Consensus 213 ~i----~~~~~~~i~l~~p~NPtG~~~~-~~~l~~i~~---~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~i~S~ 281 (423)
.+ ...++.+|++...+.-.|.+++ .+.+++|.+ . |+++|+||+|.+|...+... ...+..+. +.|+
T Consensus 210 ~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v~pD---i~t~ 286 (451)
T PRK06918 210 FFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDVVPD---LITV 286 (451)
T ss_pred HHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCCCCC---EEee
Confidence 32 2245667776644444576554 443555544 4 99999999999886544322 22222222 4489
Q ss_pred hhhhcccCccccccccCHHHHHHHHHhc--CCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHc----cCCC
Q 014492 282 SKRAGLAGLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLK----DVPF 355 (423)
Q Consensus 282 SK~~g~~G~R~G~i~~~~~~~~~l~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~----~~~~ 355 (423)
||.++ +|+|+||+++++++++.+.... ..++.+++++.++.++|+..+ -....++.++..+++.+.|+ +.+.
T Consensus 287 sK~l~-~G~pig~v~~~~~i~~~~~~~~~~~T~~g~~l~~aaa~a~l~~i~-~~~~~~~~~~~g~~l~~~l~~l~~~~~~ 364 (451)
T PRK06918 287 SKSLG-AGVPISGVIGRKEIMDESAPGELGGTYAGSPLGCAAALAVLDIIE-KENLNDRAIELGKVVMNRFEEMKNKYNC 364 (451)
T ss_pred ehhhc-CCCccEEEEEcHHHHhccCCCCcCcCCCcCHHHHHHHHHHHHHHH-HCCHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 99998 9999999999999988775433 347789999999777775210 01122223333333333333 3443
Q ss_pred Ce-ecCCCceEEEEEeCC-------CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 356 LN-PYPSYSNFILCEVTS-------GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 356 ~~-~~p~~~~~~~~~~~~-------~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
+. +.+.++++.|....+ ......+.+.+.++||.+.+++.+ .+++||+++...+.+++.+++++|
T Consensus 365 ~~~vrg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gvlv~~~~~~--~~~lrl~p~l~~t~~~id~~l~~l 437 (451)
T PRK06918 365 IGDVRGLGAMCAFELVQDRKTKEPDKTLTANICKEANKRGLLLLSAGTY--GNVIRVLMPLVITDEQLEEGLTII 437 (451)
T ss_pred ceeeccceeEEEEEEccCCCcCCCcHHHHHHHHHHHHHCCeEEeecCCC--CCEEEEECCCccCHHHHHHHHHHH
Confidence 22 334444444433211 112456677778999999986533 378999986522335666666554
No 261
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.81 E-value=2.9e-17 Score=162.56 Aligned_cols=326 Identities=16% Similarity=0.119 Sum_probs=199.0
Q ss_pred CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCC-C---C-CCCCcchHHHHHHHHHHhCCC-CCcEEEeCCHHHHHH
Q 014492 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF-P---Y-IYPDPESRRLRAALAKDSGLE-SDHILVGCGADELID 160 (423)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~-~---~-~Y~~~g~~~lr~~ia~~~g~~-~~~i~~t~G~~~al~ 160 (423)
+.+++.++|+..+. ..++ .+|++.+++.+ +.. . . .++.+...++-+.+++..+-. .+.++++++++++++
T Consensus 36 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~SGseA~e 115 (425)
T PRK07495 36 DKEGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHTCHQVVPYENYVRLAERLNALVPGDFAKKTIFVTTGAEAVE 115 (425)
T ss_pred eCCCCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccCcccCccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHH
Confidence 45678899998763 2344 46888888876 221 1 1 234444566777777776532 268999999999999
Q ss_pred HHHHHhc--CCCCeEEEcCCCchhhHHHHHH-CC-------------CeEEEecCCC-CCCCC----HHHHHHHhh----
Q 014492 161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NG-------------AAVVKVPRKS-DFSLN----VELIADAVE---- 215 (423)
Q Consensus 161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g-------------~~~~~v~~~~-~~~~d----~~~l~~~i~---- 215 (423)
.+++... ....+|+....+|++....+.. .| ..++.+|.+. ..+.+ ++.+++.+.
T Consensus 116 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~ 195 (425)
T PRK07495 116 NAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGVSVEQSLAALDKLFKADVD 195 (425)
T ss_pred HHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcccccccHHHHHHHHHHHHHhccC
Confidence 9988432 2236788888888755433211 11 1223344221 11222 445566653
Q ss_pred cCCceEEEEcCCCCCcCc-CCCHHHHHHHHc---C-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCc
Q 014492 216 REKPKCIFLTSPNNPDGS-IINDEDLLKILE---M-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGL 290 (423)
Q Consensus 216 ~~~~~~i~l~~p~NPtG~-~~~~~~l~~i~~---~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~ 290 (423)
..++.+|++...+.-+|. +.|.+.+++|.+ . |+++|+||+|..|...+.. ......+....+.++||.++ +|+
T Consensus 196 ~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~-~a~~~~gv~pDi~tlsK~l~-~G~ 273 (425)
T PRK07495 196 PQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKL-FAMEHHEVAADLTTMAKGLA-GGF 273 (425)
T ss_pred CCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCc-eeecccCCCCCEEeehhhhc-CCc
Confidence 246888888844433884 467766666654 3 9999999999987544332 11222344456788999998 899
Q ss_pred cccccccCHHHHHHHHHh--cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHc----cCCCCeecCCCce
Q 014492 291 RVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLK----DVPFLNPYPSYSN 364 (423)
Q Consensus 291 R~G~i~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~----~~~~~~~~p~~~~ 364 (423)
|+|++++++++.+.+... ...|+.+++++.++.++++.-+ -....++.+++.+++.+.|+ +.+.+.-....|.
T Consensus 274 pigav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~-~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl 352 (425)
T PRK07495 274 PLAAVTGRAEIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIE-EEDLCERANQLGNRLKQRLASLRETVPEIADIRGPGF 352 (425)
T ss_pred cceEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHH-hchHHHHHHHHHHHHHHHHHHHHhhCCCeeeeecCce
Confidence 999999999998876542 2346788999887776664311 01233344444444444443 3443332335689
Q ss_pred EEEEEeCCCC----C---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014492 365 FILCEVTSGM----D---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH 421 (423)
Q Consensus 365 ~~~~~~~~~~----~---~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~ 421 (423)
++|+++.+.. + ...+.+.+.++|+++...+. ..+.+||.....-+.++++++++.
T Consensus 353 ~~~iel~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g~--~~~~~r~~Ppl~it~~~id~~~~~ 414 (425)
T PRK07495 353 MNAVEFNDADSGLPSAEFANRVRLKALEKGLILLTCGV--HGNVIRFLAPITIQDDVFAEALDI 414 (425)
T ss_pred EEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeecCC--CCCEEEEeCCCccCHHHHHHHHHH
Confidence 9999885321 1 34577778899999976432 147899996532223444444443
No 262
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.81 E-value=2e-17 Score=164.41 Aligned_cols=324 Identities=15% Similarity=0.190 Sum_probs=199.5
Q ss_pred CCCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-CCC---CC--CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492 91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKF---PY--IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (423)
Q Consensus 91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~---~~--~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~ 161 (423)
+.+++.++|+..+ ...++ .+|++.+++.+ +.. .. .|+.+...+|.+.+++..+-..+.++++++++++++.
T Consensus 38 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~ 117 (423)
T PRK05964 38 LADGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVIFAGFTHEPAERLAQRLVALTPGGLDHVFFSDSGSVAVEV 117 (423)
T ss_pred eCCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHH
Confidence 3457789999776 34444 36888888876 221 11 2444445567788887764334689999999999999
Q ss_pred HHHHhcC-------CC-CeEEEcCCCchhhHHHHHH-CCC------------eEEEecCCCCC--CCCHHHHHHHhhc--
Q 014492 162 IMRCVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDF--SLNVELIADAVER-- 216 (423)
Q Consensus 162 ~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~--~~d~~~l~~~i~~-- 216 (423)
+++.... +| .+|+...-+|++....+.. .+- .+..++.+.+. ..+++.+++.+.+
T Consensus 118 A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~~ 197 (423)
T PRK05964 118 ALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKHA 197 (423)
T ss_pred HHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhCC
Confidence 9884421 23 5788888888754433322 111 12233322110 1127888888852
Q ss_pred CCceEEEEcC-CCCCcCcCC-CHHHHHH---HHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCc
Q 014492 217 EKPKCIFLTS-PNNPDGSII-NDEDLLK---ILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGL 290 (423)
Q Consensus 217 ~~~~~i~l~~-p~NPtG~~~-~~~~l~~---i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~ 290 (423)
.++.+|++.. .++..|... +.+.+++ +|+. |+++|+||+|.++...+..... ...+...-+.+++|.++.+++
T Consensus 198 ~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~-~~~~v~pDi~~~~K~l~gG~~ 276 (423)
T PRK05964 198 GEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLFAC-EQAGVSPDIMCLSKGLTGGYL 276 (423)
T ss_pred CcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhHH-HhcCCCCCeeeeehhhhcCcc
Confidence 4567888775 577788766 5555555 4554 9999999999877543322111 111111223467899974448
Q ss_pred cccccccCHHHHHHHHHh--------cCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeec
Q 014492 291 RVGYGAFPLSIIEYLWRA--------KQPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPY 359 (423)
Q Consensus 291 R~G~i~~~~~~~~~l~~~--------~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 359 (423)
++|++++++++.+.+... ...|+.++++..++.++|+. +++.++..+..+..++.|.+ +.+.+.+.-.
T Consensus 277 p~~av~~~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~-l~~~~~i~~v 355 (423)
T PRK05964 277 PLAATLCTAEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFEDEPVLERVAALSAGLAEGLEP-FRDLPGVADV 355 (423)
T ss_pred cceEEEEcHHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh-hccCCCeEEe
Confidence 999999999999887531 12356788888888777762 34444444444444444432 2233433323
Q ss_pred CCCceEEEEEeCCCC---CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 360 PSYSNFILCEVTSGM---DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 360 p~~~~~~~~~~~~~~---~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
...|.++.+.+.+.. ....+.+.|.++||++.+.. +.+||+.. +.++++++.+++++
T Consensus 356 rg~Gl~~~i~l~~~~~~~~~~~l~~~l~~~Gv~v~~~~-----~~lR~~p~l~~t~edId~~v~~l~~ 418 (423)
T PRK05964 356 RVLGAIGAVELDRPVLERDGPALRAFALERGVLLRPLG-----NTIYLMPPYIITAEELDRITDAIVE 418 (423)
T ss_pred ecccEEEEEEeccCcchhHHHHHHHHHHHCCeEEEecC-----CEEEEeCCcccCHHHHHHHHHHHHH
Confidence 456777778875322 25678888999999998743 57999965 45555555555543
No 263
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.80 E-value=1.8e-17 Score=160.71 Aligned_cols=280 Identities=22% Similarity=0.256 Sum_probs=187.8
Q ss_pred CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHH----HHCCCeEEEecCC
Q 014492 125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPRK 200 (423)
Q Consensus 125 ~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~~ 200 (423)
++.+|....|++.+++..|. +.++++++++.|+..++.+++++||+|++....|......+ ...|+++..++.
T Consensus 51 R~gnPt~~~le~~la~Le~g--~~a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~- 127 (386)
T PF01053_consen 51 RYGNPTVRALEQRLAALEGG--EDALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDP- 127 (386)
T ss_dssp TTC-HHHHHHHHHHHHHHT---SEEEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEEST-
T ss_pred ccccccHHHHHHHHHHhhcc--cceeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEeCc-
Confidence 44566678899999999984 67888999999999999999999999999999997555444 447999999863
Q ss_pred CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-C-CEEEEccCCccccCCCchhhhhccCCcEEEE
Q 014492 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-P-ILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (423)
Q Consensus 201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~-~~li~Deay~~~~~~~~~~~~~~~~~~~i~i 278 (423)
-|+++++++++ +++++|++.+|.||+..+.+++.+.++++. | +++++|..+...... .++ ..+.++++
T Consensus 128 ----~d~~~l~~~l~-~~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~atp~~~-~pL----~~GaDivv 197 (386)
T PF01053_consen 128 ----TDLEALEAALR-PNTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTFATPYNQ-NPL----ELGADIVV 197 (386)
T ss_dssp ----TSHHHHHHHHC-TTEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTTTHTTTC--GG----GGT-SEEE
T ss_pred ----hhHHHHHhhcc-ccceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeeccccceeee-ccC----cCCceEEE
Confidence 47899999997 699999999999999999999999999997 7 999999999744321 122 22345999
Q ss_pred ccChhhhcccC-ccccccccC--HHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccC
Q 014492 279 RTFSKRAGLAG-LRVGYGAFP--LSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDV 353 (423)
Q Consensus 279 ~S~SK~~g~~G-~R~G~i~~~--~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 353 (423)
.|.+|.++-.| .=.|.++.+ +++.++++..... ..+++.....+..-++ .+..+.++..++...+.+.|++.
T Consensus 198 ~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~G~~~~p~da~ll~rgl~---Tl~~R~~~~~~nA~~lA~~L~~h 274 (386)
T PF01053_consen 198 HSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRLLGATLSPFDAWLLLRGLR---TLPLRMERQNENAEALAEFLEEH 274 (386)
T ss_dssp EETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHHHT-B--HHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHTS
T ss_pred eeccccccCCcceeeEEEEECchhhhhhhhcchhhhcCccchHHHHHHHhcCCC---cHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999775333 225777764 4777776655433 2445555554444443 35667777788999999999998
Q ss_pred CCCe-e-cC----------------CCceEEEEEeCCCC-CHHHHHHHHHh--CCcEE--------EeCCC---------
Q 014492 354 PFLN-P-YP----------------SYSNFILCEVTSGM-DAKKLKDDLAK--MGVMI--------RHYNN--------- 395 (423)
Q Consensus 354 ~~~~-~-~p----------------~~~~~~~~~~~~~~-~~~~l~~~L~~--~gI~v--------~~~~~--------- 395 (423)
+.+. + +| +.|..+.+++.++. ....|++.|.- .+..+ .|...
T Consensus 275 p~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~~~~~~~f~~~l~l~~~~~SlGg~~SLi~~p~~~~h~~~~~e~ 354 (386)
T PF01053_consen 275 PKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGGEEAARRFLDALKLFSIAPSLGGVESLISHPASTSHRSLSPEE 354 (386)
T ss_dssp TTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSHHHHHHHHHHH-SSSEESSS-SSSS-EEEETTCTTTTTSCHHH
T ss_pred CCCCeEEEcccccccceeeeeecccccCceeEEEeccchhhhHhHHhhhhhHhhhhhcCCcccccccccchhhccCChhh
Confidence 7654 2 44 33457788887443 34556666531 11111 11110
Q ss_pred ----CCCCCeEEEEecChhhHHHHHHHHhh
Q 014492 396 ----KELKGYVRVSVGKPEHTDALMECLMH 421 (423)
Q Consensus 396 ----~~~~~~iRis~~~~~~~~~l~~al~~ 421 (423)
.-.++.||||++.++ .++|.+-|++
T Consensus 355 ~~~~Gi~~~liRlSvGlEd-~~dLi~Dl~~ 383 (386)
T PF01053_consen 355 RAEAGISDGLIRLSVGLED-PDDLIADLEQ 383 (386)
T ss_dssp HHHTTS-TTEEEEE--SS--HHHHHHHHHH
T ss_pred hhccCCCCCeeEEEeccCC-HHHHHHHHHH
Confidence 112468999999866 4777666653
No 264
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=99.80 E-value=5.7e-18 Score=153.60 Aligned_cols=329 Identities=17% Similarity=0.232 Sum_probs=228.3
Q ss_pred CchHHHHHHhCCCC-CCeeEcCCCCC--CCCC---CHHHHHHHhcC---CCCCCC-CCcchHHHHHHHHHHh-C-----C
Q 014492 81 LPFEVLSIQLGRKP-EDIVKIDANEN--PYGP---PPEVREALGQL---KFPYIY-PDPESRRLRAALAKDS-G-----L 144 (423)
Q Consensus 81 ~~~~~~~~~~~~~~-~~~i~l~~~~~--~~~~---~~~v~~al~~~---~~~~~Y-~~~g~~~lr~~ia~~~-g-----~ 144 (423)
+++..+.+.+.+++ ..-|+|+.|.. +.+. .|.|++|-.++ .....| |-.|..++.+..+++. | +
T Consensus 37 DpILGVTeAfk~D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYlpI~Gl~eF~k~sakLa~G~~s~~i 116 (427)
T KOG1411|consen 37 DPILGVTEAFKKDPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYLPITGLAEFNKLSAKLALGDNSPVI 116 (427)
T ss_pred CCcccHHHHHhcCCCcceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchhccccchHHHHHHHHHHhhcCCchhh
Confidence 34444556665543 33467776632 1222 36777776652 223567 8889999999999874 4 2
Q ss_pred CCCcEEE--eCCHHHHHHHHHHHh--cCCCCeEEEcCCCchhhHHHHHHCCCeEEEec--CCCCCCCCHHHHHHHhhcCC
Q 014492 145 ESDHILV--GCGADELIDLIMRCV--LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAVEREK 218 (423)
Q Consensus 145 ~~~~i~~--t~G~~~al~~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~--~~~~~~~d~~~l~~~i~~~~ 218 (423)
..++|+. |-+++.++.+...-+ .-++..|.++.|+|.......+.+|..+..+. .....++|.+.+.+.+.+..
T Consensus 117 k~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~~p 196 (427)
T KOG1411|consen 117 KEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGEAP 196 (427)
T ss_pred hccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCccccccCcceeeeeeccccccccchHHHHHHHhcCC
Confidence 3344442 334445554444322 34678899999999999999999999987776 33456899999888886544
Q ss_pred ceEEEEcC--CCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc------hhhhhccCCcEEEEccChhhhc
Q 014492 219 PKCIFLTS--PNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES------RMEWVKKHDNLIVLRTFSKRAG 286 (423)
Q Consensus 219 ~~~i~l~~--p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~------~~~~~~~~~~~i~i~S~SK~~g 286 (423)
...+++++ .|||||+--+.+++++|.+. +.+-+.|-+|..|..+.. ....+.+..+++++.|++|.+|
T Consensus 197 ~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNMG 276 (427)
T KOG1411|consen 197 EGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNMG 276 (427)
T ss_pred CCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCCceEeehhhhhhcc
Confidence 55566664 48999999999999999885 899999999999985431 2334556788999999999999
Q ss_pred ccCcccccccc---CHHHHH----HHHHhcCC--CCCcHHHHHHHHHHhCCh----HH---HHHHHHHHHHHHHHHHHHH
Q 014492 287 LAGLRVGYGAF---PLSIIE----YLWRAKQP--YNVSVAAEVAACAALQNP----IY---LEKVKEALIKERERLFKLL 350 (423)
Q Consensus 287 ~~G~R~G~i~~---~~~~~~----~l~~~~~~--~~~~~~~~~a~~~~l~~~----~~---~~~~~~~~~~~~~~l~~~L 350 (423)
+.|.|+|.+-. +.+... ++....++ .+++..+...+...|.++ +| +..+..++...|+.|.+.|
T Consensus 277 LYgERvGa~svvc~~ad~A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~~l~~~W~~evk~MadRi~~mR~~L~d~L 356 (427)
T KOG1411|consen 277 LYGERVGALSVVCKDADEAKRVESQLKILIRPMYSNPPLHGARIVATILSDPDLKNQWLGEVKGMADRIISMRQQLFDAL 356 (427)
T ss_pred hhhhccceeEEEecCHHHHHHHHHHHHHHhcccccCCCccchhhhhhccCChHHHHHHHHHHHHHHHhhhhhHHHHhHHh
Confidence 99999997533 444333 33444444 356666777788888884 45 4456788889999999999
Q ss_pred ccCC----CCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhh
Q 014492 351 KDVP----FLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG--KPEHTDALMECLMH 421 (423)
Q Consensus 351 ~~~~----~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~ 421 (423)
+..+ |-.+..+-|+|.+-.+ +.+++-....++.|++..-+ |||++ +....++|.+++..
T Consensus 357 ~~~gs~~~W~hI~~QIGMF~fTgl----~peQv~~l~ke~~iYmT~dG--------RiS~aG~ss~nV~yLa~aih~ 421 (427)
T KOG1411|consen 357 EKEGSPGNWSHITKQIGMFCFTGL----NPEQVDWLTKEYHIYLTKDG--------RISMAGLSSSNVPYLADAIHA 421 (427)
T ss_pred hcCCCCccHHHHHHhhheeeecCC----CHHHHHHHHhhheeeeccCc--------eEeeccccccCCcccchhhHh
Confidence 7643 3345678899988755 45555444458999998766 99986 34446778877765
No 265
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.80 E-value=1e-17 Score=162.43 Aligned_cols=302 Identities=15% Similarity=0.084 Sum_probs=207.2
Q ss_pred CCCCCCHHHHHHHhcC--CC----------CCCCCCc--chHHHHHHHHHHhCCC-CCcEE-EeCCHHHHHHHHHHHhcC
Q 014492 105 NPYGPPPEVREALGQL--KF----------PYIYPDP--ESRRLRAALAKDSGLE-SDHIL-VGCGADELIDLIMRCVLD 168 (423)
Q Consensus 105 ~~~~~~~~v~~al~~~--~~----------~~~Y~~~--g~~~lr~~ia~~~g~~-~~~i~-~t~G~~~al~~~~~~l~~ 168 (423)
.|...+++|++|+... +. +++-+.. -..++++.++++++.+ ..+|+ ++++++.+++.++..++.
T Consensus 10 GP~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~~ 89 (360)
T PRK05355 10 GPAMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLLG 89 (360)
T ss_pred CCCCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcCC
Confidence 4555678999998752 11 1221221 2568899999999973 33454 557788889999999999
Q ss_pred CCCeEEEcCCCch--hhHHHHHHCCCeEEEecCCC-CCCCCHHHHHH-HhhcCCceEEEEcCCCCCcCcCCCHHHHHHHH
Q 014492 169 PGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRKS-DFSLNVELIAD-AVEREKPKCIFLTSPNNPDGSIINDEDLLKIL 244 (423)
Q Consensus 169 ~gd~Vl~~~p~y~--~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~-~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~ 244 (423)
+|+++++..-+.. .+...++.+|.. ..+..+. ....+..++++ .++ .++++|.+++..+.||+..+ .+.+|
T Consensus 90 ~g~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~g~~~~~~~~~~~l~-~~~~~V~~th~eTstGv~~~--~i~~i- 164 (360)
T PRK05355 90 GGKKADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDDGFTYIPPLDEWQLS-DDAAYVHYTSNETIDGTEFH--ELPDT- 164 (360)
T ss_pred CCCeEEEEECCHHHHHHHHHHHHhCCc-eEEecccccCCCCCCChhhccCC-CCCCEEEEccCCCcceEecC--ccccc-
Confidence 9988776554443 455677888865 5555432 22344444444 665 58999999999999999984 23333
Q ss_pred cCCCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHh--------------cC
Q 014492 245 EMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA--------------KQ 310 (423)
Q Consensus 245 ~~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~--------------~~ 310 (423)
.|+++|+|.+.+-.... -.. +..+ +++.|..|.+|.+| +|+++.+++.++++... ..
T Consensus 165 -~g~l~vVDavss~g~~~-idv---~~~d--~~~~ssqK~lgP~G--lg~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~ 235 (360)
T PRK05355 165 -GDVPLVADMSSDILSRP-IDV---SKFG--LIYAGAQKNIGPAG--LTIVIVREDLLGRALPSIPSMLDYKTHADNDSM 235 (360)
T ss_pred -CCCcEEEEcCccccCcc-CCH---HHcc--EEEEeccccccCCc--eEEEEECHHHHhhcccCCChHHHHHHHHhcCCc
Confidence 69999999998844321 111 2233 78888899998777 68899888887765431 12
Q ss_pred CCCCcHHHHHHHHHHhCC--hH-HHHHHHHHHHHHHHHHHHHHccCCCCeec-C--CCc-eEEEEEeCCCCCHHHHHHHH
Q 014492 311 PYNVSVAAEVAACAALQN--PI-YLEKVKEALIKERERLFKLLKDVPFLNPY-P--SYS-NFILCEVTSGMDAKKLKDDL 383 (423)
Q Consensus 311 ~~~~~~~~~~a~~~~l~~--~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p--~~~-~~~~~~~~~~~~~~~l~~~L 383 (423)
++++|.....++.++|+. .+ .++.+.++.++..+++++.|+++++.... + ... ..+.+.++++.+..++.+.+
T Consensus 236 ~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~sf~~~~~~~~~~~~~~~ 315 (360)
T PRK05355 236 YNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMNVPFTLADEELDKKFLAEA 315 (360)
T ss_pred cCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcEEEEEcCChHHHHHHHHHH
Confidence 356777777777777764 23 47889999999999999999998854321 1 122 44667777554446677788
Q ss_pred HhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492 384 AKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL 422 (423)
Q Consensus 384 ~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l 422 (423)
.++|+.+..+.. ..+.+|+|+. +.+|++.|.++|+++
T Consensus 316 ~~~Gi~~~~~~~--~~g~vRiS~~~~nt~eei~~l~~~l~~~ 355 (360)
T PRK05355 316 KAAGLVGLKGHR--SVGGMRASIYNAMPLEGVQALVDFMKEF 355 (360)
T ss_pred HHCCCcccCCCC--ccCcEEEECCCCCCHHHHHHHHHHHHHH
Confidence 889999854432 3578999975 577788888888764
No 266
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.79 E-value=3.7e-17 Score=161.61 Aligned_cols=215 Identities=14% Similarity=0.098 Sum_probs=153.3
Q ss_pred CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhH----HHHHHCCCeEEEecCCCC
Q 014492 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPRKSD 202 (423)
Q Consensus 127 ~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~~~~ 202 (423)
..+....+++.++++.|. .+.|++++|+ .++.+++.+++++||+|+++...|.... ..++..|++++.++ +.
T Consensus 67 ~~pt~~~le~~la~l~g~-~~~v~fsSG~-~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-~~- 142 (437)
T PRK05613 67 TNPTVEALENRIASLEGG-VHAVAFASGQ-AAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVE-NP- 142 (437)
T ss_pred cChHHHHHHHHHHHHhCC-CeEEEeCCHH-HHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEEC-CC-
Confidence 345578899999999996 3566666666 7777888888999999999999997553 34466899999997 22
Q ss_pred CCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccC
Q 014492 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF 281 (423)
Q Consensus 203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~ 281 (423)
.|+++++++++ +++++|++.++.||+|.+.+.+++.++|+. |+++|+|.+++..... ... ..+..+++.|+
T Consensus 143 --~d~e~l~~~l~-~~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t~a~g~~~-~p~----~~GaDivv~S~ 214 (437)
T PRK05613 143 --DDPESWQAAVQ-PNTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDNTIATAALV-RPL----ELGADVVVASL 214 (437)
T ss_pred --CCHHHHHHhCC-ccCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEECCCcccccc-ChH----HhCCCEEEeec
Confidence 27999999997 689999999999999999999999999997 9999999998643221 111 22346999999
Q ss_pred hhhhcccCcccc-ccccCHHH-----------------------------------HH-HHHHh--cCCCCCcHHHHHHH
Q 014492 282 SKRAGLAGLRVG-YGAFPLSI-----------------------------------IE-YLWRA--KQPYNVSVAAEVAA 322 (423)
Q Consensus 282 SK~~g~~G~R~G-~i~~~~~~-----------------------------------~~-~l~~~--~~~~~~~~~~~~a~ 322 (423)
+|.++..|--+| .++.+.++ .. ..... .....+++.....+
T Consensus 215 ~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~ 294 (437)
T PRK05613 215 TKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARAGLLRDTGATLSPFNAWVT 294 (437)
T ss_pred cceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 998775554444 34432210 00 00011 11234555555444
Q ss_pred HHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCC
Q 014492 323 CAALQNPIYLEKVKEALIKERERLFKLLKDVPFL 356 (423)
Q Consensus 323 ~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 356 (423)
..-| +.+..+.++..++..++.+.|++.+.+
T Consensus 295 ~rgl---~TL~lR~~~~~~nA~~lA~~L~~hp~V 325 (437)
T PRK05613 295 AQGL---DTLSLRLERHNENAIKVAEFLNNHEKV 325 (437)
T ss_pred Hccc---CcHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 4333 446667777788999999999987754
No 267
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.79 E-value=9.4e-17 Score=153.84 Aligned_cols=279 Identities=21% Similarity=0.203 Sum_probs=192.5
Q ss_pred CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhH----HHHHHCCCeEEEecCC
Q 014492 125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPRK 200 (423)
Q Consensus 125 ~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~~ 200 (423)
++.+|....|+++++.+-| .++.+.++++..|+..++..++++||+|++....|.... ...+.+|+++..++.
T Consensus 59 R~~nPT~~~lE~~~a~LEg--~~~~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~- 135 (396)
T COG0626 59 RTGNPTRDALEEALAELEG--GEDAFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDP- 135 (396)
T ss_pred cCCCccHHHHHHHHHHhhC--CCcEEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECC-
Confidence 3456777899999999986 467788888889999999999999999999999886433 444568999998873
Q ss_pred CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEc
Q 014492 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR 279 (423)
Q Consensus 201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~ 279 (423)
.|.+++++++.++++|+|++.+|.||+-.+.++.++.++++. |+++|+|..|....+.. ++ ..+..|++.
T Consensus 136 ----~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP~~q~-PL----~~GaDIVvh 206 (396)
T COG0626 136 ----GDDEALEAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFATPVLQR-PL----ELGADIVVH 206 (396)
T ss_pred ----CChHHHHHHhcccCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCcccccccC-hh----hcCCCEEEE
Confidence 244566766654689999999999999999999999999998 89999999998544321 11 234569999
Q ss_pred cChhhhcccC-ccccccccCHH-HHHHHHHhcC---CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC
Q 014492 280 TFSKRAGLAG-LRVGYGAFPLS-IIEYLWRAKQ---PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP 354 (423)
Q Consensus 280 S~SK~~g~~G-~R~G~i~~~~~-~~~~l~~~~~---~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 354 (423)
|.+|-++--+ +=.|.++++.+ +.+.+..... ...+++.....+..-+ +.+..+.++..++...+.+.|++.+
T Consensus 207 SaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G~~l~p~dA~l~lRGl---kTL~~Rm~~~~~nA~~IA~~L~~~p 283 (396)
T COG0626 207 SATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANTGAVLSPFDAWLLLRGL---RTLALRMERHNENALKIAEFLADHP 283 (396)
T ss_pred eccccccCCcceeeeEEecChHHHHHHHHHHHHhhcCCCCCHHHHHHHHhcc---chHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999876322 22466665554 4444422222 2345666555444443 4466777778889999999999877
Q ss_pred CCe--ecCC----------------CceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC---------------------
Q 014492 355 FLN--PYPS----------------YSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN--------------------- 395 (423)
Q Consensus 355 ~~~--~~p~----------------~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~--------------------- 395 (423)
.+. .+|+ .|..+.+++.++.+..+|.+.|.--.+..+-|+.
T Consensus 284 ~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~~~~~~f~~~L~l~~~a~SlGgveSLi~~pa~~th~~~~~~~r~ 363 (396)
T COG0626 284 KVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNEEAAKKFLDSLKLFKLAESLGGVESLISHPATMTHASIPLEERA 363 (396)
T ss_pred CeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCChHHHHHHHHhCCccEEeccCCCcccccccccccCcccCCHhHHH
Confidence 654 2453 5666778886443345556655422222221111
Q ss_pred --CCCCCeEEEEecChhhHHHHHHHH
Q 014492 396 --KELKGYVRVSVGKPEHTDALMECL 419 (423)
Q Consensus 396 --~~~~~~iRis~~~~~~~~~l~~al 419 (423)
.-.++.||+|++.++ .++|.+-|
T Consensus 364 ~~Gi~~~LvRlSVGlEd-~eDLi~Dl 388 (396)
T COG0626 364 KAGITDGLVRLSVGLED-VEDLIADL 388 (396)
T ss_pred hcCCCCCeEEEEecCCC-HHHHHHHH
Confidence 112578999999755 35554443
No 268
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.79 E-value=1.7e-16 Score=158.34 Aligned_cols=325 Identities=14% Similarity=0.111 Sum_probs=195.0
Q ss_pred CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCCCC--C---CCCcchHHHHHHHHHHhCCC-CCcEEEeCCHHHHHH
Q 014492 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFPY--I---YPDPESRRLRAALAKDSGLE-SDHILVGCGADELID 160 (423)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~~--~---Y~~~g~~~lr~~ia~~~g~~-~~~i~~t~G~~~al~ 160 (423)
+.+++.+||+..+. ..++ .+|++.+++.+ +.... . ++.....++-+.+++.++.. .+.++++++++++++
T Consensus 52 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e 131 (443)
T PRK06058 52 DVDGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARFTHTCFMVTPYEGYVAVAEQLNRLTPGDHEKRSALFNSGAEAVE 131 (443)
T ss_pred eCCCCEEEEcCcchhhhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHH
Confidence 45678899998763 3344 46888888876 22111 1 12223456777777766432 257889999999999
Q ss_pred HHHHHhc--CCCCeEEEcCCCchhhHHHHHHC-CC-------------eEEEecCCCCCC------C--------CHHHH
Q 014492 161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAVN-GA-------------AVVKVPRKSDFS------L--------NVELI 210 (423)
Q Consensus 161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~-g~-------------~~~~v~~~~~~~------~--------d~~~l 210 (423)
.+++... ...++|+...++|++....+... +. .+..+|....+. . .++.+
T Consensus 132 ~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 211 (443)
T PRK06058 132 NAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVI 211 (443)
T ss_pred HHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHH
Confidence 9988321 22378999999998766443321 10 122222111111 1 12334
Q ss_pred HHHhhcCCceEEEEcCCCCCcCcCCC-H---HHHHHHHcC-CCEEEEccCCccccCCCchh--hhhccCCcEEEEccChh
Q 014492 211 ADAVEREKPKCIFLTSPNNPDGSIIN-D---EDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSK 283 (423)
Q Consensus 211 ~~~i~~~~~~~i~l~~p~NPtG~~~~-~---~~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~i~S~SK 283 (423)
++.+..+++.+|++...+.-.|.+.+ . +++.++|+. |+++|.||++..|...+... ...+..+.++ +++|
T Consensus 212 ~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv~PDiv---~~gK 288 (443)
T PRK06058 212 EKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGIVPDLI---TTAK 288 (443)
T ss_pred HHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCCCCCEE---EEcc
Confidence 44443356778876544443455543 3 455556665 99999999999886433221 1222233333 3479
Q ss_pred hhcccCccccccccCHHHHHHHHHhc--CCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc----CCCCe
Q 014492 284 RAGLAGLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKD----VPFLN 357 (423)
Q Consensus 284 ~~g~~G~R~G~i~~~~~~~~~l~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~ 357 (423)
.+| .|+++|++++++++++.+.... ..|+.+++++.++.++|+.-+ -+...++.+++.+++.+.|++ .+.+.
T Consensus 289 ~l~-~G~Pi~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~-~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~ 366 (443)
T PRK06058 289 GIA-GGLPLSAVTGRAEIMDAPHPGGLGGTYGGNPVACAAALAAIETIE-EDDLVARARQIEALMTDRLRALAAEDDRIG 366 (443)
T ss_pred ccc-CCCccEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHH-HcCHHHHHHHHHHHHHHHHHHHHhhCCcEE
Confidence 998 8999999999999888775332 347789999999998886411 123455555666666666654 34332
Q ss_pred ecCCCceEEEEEeCCC---C----CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 358 PYPSYSNFILCEVTSG---M----DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 358 ~~p~~~~~~~~~~~~~---~----~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
-..+.|.++.+.+.+. . -...+.+.+.++||++.+++.. .++||+......+.++++++++++
T Consensus 367 ~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~~~~~~~~--~~~lr~~Ppl~~t~~~i~~~~~~l 436 (443)
T PRK06058 367 DVRGRGAMIAIELVKPGTTEPDAELTKALAAAAHAAGVIVLTCGTY--GNVIRLLPPLVIGDELLREGLDVL 436 (443)
T ss_pred eeeccceEEEEEEecCCCCCCcHHHHHHHHHHHHHCCeEEeccCCC--CCEEEEECCCccCHHHHHHHHHHH
Confidence 2345667766666321 1 1345677778999999875432 368999865333334555555443
No 269
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.79 E-value=1.7e-16 Score=157.19 Aligned_cols=319 Identities=13% Similarity=0.135 Sum_probs=202.5
Q ss_pred CCCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-C---CCCCCC-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492 91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-L---KFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (423)
Q Consensus 91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~---~~~~~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~ 162 (423)
+.+++.++|+..+ ...++ .+|+|.+|+.+ + .....| ..+...++-+.+++...-..+.++++++++||++.+
T Consensus 71 D~dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~SGsEA~e~A 150 (442)
T TIGR03372 71 DTQGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPLHSQELLDPLRALLAKTLAALTPGKLKYSFFCNSGTESVEAA 150 (442)
T ss_pred ECCCCEEEECCccHHhhhcCCCCHHHHHHHHHHHHhCCCcccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHH
Confidence 4567889999877 45554 46888888876 2 222222 344456777888777653346899999999999999
Q ss_pred HHHhcC----CC-CeEEEcCCCchhhHHHHHHC-CCe------------EEEecCCCCCCCCHHHHHHHhhc-----CCc
Q 014492 163 MRCVLD----PG-DKIVDCPPTFTMYEFDAAVN-GAA------------VVKVPRKSDFSLNVELIADAVER-----EKP 219 (423)
Q Consensus 163 ~~~l~~----~g-d~Vl~~~p~y~~~~~~~~~~-g~~------------~~~v~~~~~~~~d~~~l~~~i~~-----~~~ 219 (423)
++.... .| ..|+....+|++....+... +-. +..+| ..|.+.+++.++. .++
T Consensus 151 lklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p-----~~d~~~~~~~l~~~~~~~~~v 225 (442)
T TIGR03372 151 LKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVA-----FGDIEAMLKALNECKKTGDDV 225 (442)
T ss_pred HHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeC-----CCCHHHHHHHHHHHhcCCCcE
Confidence 884321 23 57888888887554333222 211 12222 1256777776642 457
Q ss_pred eEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEEEccChhhhcccC-cc
Q 014492 220 KCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAG-LR 291 (423)
Q Consensus 220 ~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~g~~G-~R 291 (423)
.+|++...+...|.+.+ .+++.++|+. |+++|+||++..|...+.. ....+..+.++ +++|.+| .| +.
T Consensus 226 AavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDiv---t~gK~lg-~G~~P 301 (442)
T TIGR03372 226 AAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGVQPDIL---CLAKALG-GGVMP 301 (442)
T ss_pred EEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccchhhhhcCCCCCee---eehhhhc-CCccc
Confidence 78888877777898887 6777778876 9999999999876533322 11122223322 4899998 78 68
Q ss_pred ccccccCHHHHHHHHH----hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc----CC-CCeecCCC
Q 014492 292 VGYGAFPLSIIEYLWR----AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKD----VP-FLNPYPSY 362 (423)
Q Consensus 292 ~G~i~~~~~~~~~l~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~-~~~~~p~~ 362 (423)
+|.+++++++.+.+.. ....|+.++++.+++.+.|+.-+- +...++.++.-+++.+.|++ .+ .+.-..+.
T Consensus 302 igavv~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~-~~l~~~~~~~G~~l~~~L~~l~~~~~~~i~~vRG~ 380 (442)
T TIGR03372 302 IGATIATEAVFSVLFDNPFLHTTTFGGNPLACAAALATINELLE-KNLPAQAAIKGDFLLDGFQQLAAEYPDLIIEARGK 380 (442)
T ss_pred ceEEEecHHHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecc
Confidence 9999999998887732 123456688888888887753110 12233344444444444443 44 23323567
Q ss_pred ceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014492 363 SNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH 421 (423)
Q Consensus 363 ~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~ 421 (423)
|.++.+.+.+......+.+.|+++||++..... ..+.+||.+....+.++++++++.
T Consensus 381 Gl~~giel~~~~~~~~i~~~l~~~Gvl~~~~~~--~~~~lr~~Ppl~~t~~~id~~~~~ 437 (442)
T TIGR03372 381 GLLMAIEFRDNEIGYAFAKELFQQNILVAGTLN--NAKSIRIEPPLTITIEQCALVIKA 437 (442)
T ss_pred eEEEEEEeCChHHHHHHHHHHHHCCcEEeecCC--CCCEEEEECCcccCHHHHHHHHHH
Confidence 888889886433456788999999999976432 236899997643333444444443
No 270
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.78 E-value=5.7e-17 Score=171.76 Aligned_cols=285 Identities=14% Similarity=0.089 Sum_probs=206.3
Q ss_pred HHHHHHHHHHhCCCCCcEEEeCCHH----HHHHHHHHHhcCC-CC----eEEEcCCCchhhHHHHHHCCCeEEEecCCCC
Q 014492 132 RRLRAALAKDSGLESDHILVGCGAD----ELIDLIMRCVLDP-GD----KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD 202 (423)
Q Consensus 132 ~~lr~~ia~~~g~~~~~i~~t~G~~----~al~~~~~~l~~~-gd----~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~ 202 (423)
.++|+.+++++|. +.|.++++++ +++.++++.+.++ || .|+++...|......+...|++++.+|.+.+
T Consensus 571 ~~~r~~la~i~g~--~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~~vv~v~~d~~ 648 (993)
T PLN02414 571 EDLGDLLCEITGF--DSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVVVGTDAK 648 (993)
T ss_pred HHHHHHHHHHhCC--CeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCCCEEEEeccCCC
Confidence 4899999999997 8899999999 8999999999866 88 8999999999888888889999999998777
Q ss_pred CCCCHHHHHHHhhc--CCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEc
Q 014492 203 FSLNVELIADAVER--EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR 279 (423)
Q Consensus 203 ~~~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~ 279 (423)
+.+|+++|++.+++ +++++|++++|+|-+|...+.+++.++++. |+++++|.++....... ......+-++++.
T Consensus 649 G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l---~~p~~~GaD~~~~ 725 (993)
T PLN02414 649 GNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVGL---TSPGFIGADVCHL 725 (993)
T ss_pred CCcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccCc---CCccccCCCEEEe
Confidence 89999999999974 478999999999999999999999999987 99999999985322111 1122455668999
Q ss_pred cChhhhcc----cCccccccccCHHHHHHHHHh------------cCC--CCCc------HHHHHHHHHHhCC--hHHHH
Q 014492 280 TFSKRAGL----AGLRVGYGAFPLSIIEYLWRA------------KQP--YNVS------VAAEVAACAALQN--PIYLE 333 (423)
Q Consensus 280 S~SK~~g~----~G~R~G~i~~~~~~~~~l~~~------------~~~--~~~~------~~~~~a~~~~l~~--~~~~~ 333 (423)
|.+|.|+. .|-.+|++.+.+.+...+-.. ... .+.+ .....++..++.. .+.+.
T Consensus 726 s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG~~Gl~ 805 (993)
T PLN02414 726 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGSALILPISYTYIAMMGSEGLT 805 (993)
T ss_pred cCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCCCcccccCCCCcCCccchhhhhHHHHHHHHHHHHHHCHhHHH
Confidence 99997652 345578888776655443210 111 1111 1223333444433 45677
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCeecCCCceE---EEEEeC---C--CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEE
Q 014492 334 KVKEALIKERERLFKLLKDVPFLNPYPSYSNF---ILCEVT---S--GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVS 405 (423)
Q Consensus 334 ~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~---~~~~~~---~--~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis 405 (423)
+..++...+.+++.+.|++.-.+......+.+ ..+.++ + +.+..++.++|.++||.....+ +...+++||+
T Consensus 806 ~~a~~a~~nAnYl~~rL~~~~~~~~~~~~~~~~hEfv~~~~~l~~~~g~~~~di~krL~d~Gihapt~~-~pv~~~lmie 884 (993)
T PLN02414 806 DASKIAILNANYMAKRLEGHYPVLFRGKNGTCAHEFIIDLRPFKNTAGIEPEDVAKRLMDYGFHAPTMS-WPVPGTLMIE 884 (993)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCccccCCCCCeeeeEEEeccccccccCCCHHHHHHHHHHcCcEEeeec-cccCCEEEEE
Confidence 88888889999999999763222221112221 123332 1 4677999999999999765433 3458899999
Q ss_pred ec---ChhhHHHHHHHHhhh
Q 014492 406 VG---KPEHTDALMECLMHL 422 (423)
Q Consensus 406 ~~---~~~~~~~l~~al~~l 422 (423)
.+ +.++.|+|.+++..+
T Consensus 885 pTE~~skeelDrf~~al~~i 904 (993)
T PLN02414 885 PTESESKAELDRFCDALISI 904 (993)
T ss_pred eeeeCCHHHHHHHHHHHHHH
Confidence 76 566677777777654
No 271
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.78 E-value=4.2e-18 Score=147.22 Aligned_cols=164 Identities=16% Similarity=0.150 Sum_probs=133.3
Q ss_pred hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhH-HHHHHCCCeEEEecCCCCCCCCH--
Q 014492 131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE-FDAAVNGAAVVKVPRKSDFSLNV-- 207 (423)
Q Consensus 131 ~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~-~~~~~~g~~~~~v~~~~~~~~d~-- 207 (423)
..++++.++++++.+.+++++++|+++++.+++.++..++++|+++.+.|.... ..++..|++++.++.+++...+.
T Consensus 2 ~~~~~~~l~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~ 81 (170)
T cd01494 2 LEELEEKLARLLQPGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVDDAGYGGLDV 81 (170)
T ss_pred HHHHHHHHHHHcCCCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhhHHHhcCCEEEEeccCCCCccchhh
Confidence 367999999999766789999999999999999999888999999999998777 77888999999999655433333
Q ss_pred HHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhc
Q 014492 208 ELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG 286 (423)
Q Consensus 208 ~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 286 (423)
+.+++.....+++++++++++||+|...+.+++.++++. |+++|+|++|..+...... ......+.++++.|++|.++
T Consensus 82 ~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~-~~~~~~~~d~~~~s~~K~~~ 160 (170)
T cd01494 82 AILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPG-VLIPEGGADVVTFSLHKNLG 160 (170)
T ss_pred hhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccc-cccccccCCEEEEEcccccC
Confidence 356555545789999999999999999999999999987 9999999999977653321 11223445688899999887
Q ss_pred ccCcccccccc
Q 014492 287 LAGLRVGYGAF 297 (423)
Q Consensus 287 ~~G~R~G~i~~ 297 (423)
. .++|++++
T Consensus 161 ~--~~~G~l~~ 169 (170)
T cd01494 161 G--EGGGVVIV 169 (170)
T ss_pred C--CceEEEEe
Confidence 4 67898875
No 272
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.78 E-value=4.2e-17 Score=157.43 Aligned_cols=273 Identities=12% Similarity=0.067 Sum_probs=194.1
Q ss_pred hHHHHHHHHHHhCCC-CCcEEEeCC-HHHHHHHHHHHhcCCCCeEEEcCCCch--hhHHHHHHCCCeEEEecCC----CC
Q 014492 131 SRRLRAALAKDSGLE-SDHILVGCG-ADELIDLIMRCVLDPGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRK----SD 202 (423)
Q Consensus 131 ~~~lr~~ia~~~g~~-~~~i~~t~G-~~~al~~~~~~l~~~gd~Vl~~~p~y~--~~~~~~~~~g~~~~~v~~~----~~ 202 (423)
..++++.++++++.+ ..+|++++| ++.+++.++..++.+||++++..-+.. .+...++..|+ +..+..+ .+
T Consensus 39 ~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~~~~~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~ 117 (349)
T TIGR01364 39 ANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLAEGKVADYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYT 117 (349)
T ss_pred HHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCC-cEEEeccccCCCC
Confidence 457889999999973 346877766 999999999999999998776554443 55677888898 7666633 23
Q ss_pred CCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccC
Q 014492 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF 281 (423)
Q Consensus 203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~ 281 (423)
..+|+++++ +. .++++|.+++..|.||+..+ ++++. ++++++|.+.+-.... -.. +..+ +++.|.
T Consensus 118 ~~~~~~~~~--~~-~~~~~v~~th~ETstGv~~~-----~l~~~~~~l~iVDavss~g~~~-id~---~~~d--~~~~ss 183 (349)
T TIGR01364 118 KIPDPSTWE--IS-EDAAYVHYCANETIHGVEFR-----ELPDVKNAPLVADMSSNILSRP-IDV---SKFG--LIYAGA 183 (349)
T ss_pred CCCCHHhcC--CC-CCCCEEEEcCCCCcccEecc-----eecccCCCeEEEEccccccCcc-CCH---HHcc--EEEEec
Confidence 356777665 23 58999999999999999876 56665 8999999998744321 111 2233 888888
Q ss_pred hhhhcccCccccccccCHHHHHHHHH-----------h--cC-CCCCcHHHHHHHHHHhCC--hH-HHHHHHHHHHHHHH
Q 014492 282 SKRAGLAGLRVGYGAFPLSIIEYLWR-----------A--KQ-PYNVSVAAEVAACAALQN--PI-YLEKVKEALIKERE 344 (423)
Q Consensus 282 SK~~g~~G~R~G~i~~~~~~~~~l~~-----------~--~~-~~~~~~~~~~a~~~~l~~--~~-~~~~~~~~~~~~~~ 344 (423)
.|.+|.+| +|+++.+++.++++.. . .. +++++.....++.++|+. .+ .++++.++.+++.+
T Consensus 184 qK~lgP~G--lg~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~ 261 (349)
T TIGR01364 184 QKNIGPAG--LTVVIVRKDLLGRASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQ 261 (349)
T ss_pred ccccCCCc--eEEEEECHHHHhhcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 99999777 6889998888765421 1 11 246777777777777764 23 48899999999999
Q ss_pred HHHHHHccCCCCeec---CC-Cc-eEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHH
Q 014492 345 RLFKLLKDVPFLNPY---PS-YS-NFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALM 416 (423)
Q Consensus 345 ~l~~~L~~~~~~~~~---p~-~~-~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~ 416 (423)
++++.|++++++... +. .. ..+.+.+++.....++...+.++|+.+.++.. ..+.+|+|+. +.+|++.|.
T Consensus 262 ~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~~~~~~~~~~~~~~Gi~~~~~~~--~~g~vRvS~~~~nt~edid~l~ 339 (349)
T TIGR01364 262 LLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNEELEKRFLKEAEERGLVSLKGHR--SVGGMRASIYNAMPLEGVQALV 339 (349)
T ss_pred HHHHHHHhCCCeeccCCCHHHcCCeEEEEecCChhHhHHHHHHHHHCCCcccCCcc--ccCeeEEECcCCCCHHHHHHHH
Confidence 999999999744322 11 22 34556666321235666777789996666543 3468999975 577788888
Q ss_pred HHHhhh
Q 014492 417 ECLMHL 422 (423)
Q Consensus 417 ~al~~l 422 (423)
++|+++
T Consensus 340 ~al~~~ 345 (349)
T TIGR01364 340 DFMKEF 345 (349)
T ss_pred HHHHHH
Confidence 888765
No 273
>PRK02769 histidine decarboxylase; Provisional
Probab=99.78 E-value=1.1e-16 Score=155.73 Aligned_cols=273 Identities=10% Similarity=0.003 Sum_probs=192.5
Q ss_pred HHHHHHHHHHhCCCCCcE--EEeCCHHHHHHHHHHHh--cCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCH
Q 014492 132 RRLRAALAKDSGLESDHI--LVGCGADELIDLIMRCV--LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNV 207 (423)
Q Consensus 132 ~~lr~~ia~~~g~~~~~i--~~t~G~~~al~~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~ 207 (423)
.++++.+++++|.+++++ ++|+|++|++...+... ..+++.|+++.-.|......++..|.+.+.|+.++++.+|+
T Consensus 68 ~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~~~g~id~ 147 (380)
T PRK02769 68 RDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVITSLPNGEIDY 147 (380)
T ss_pred HHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCceeccCCCCcCcH
Confidence 467888899999876654 88999999976665433 24678999999999999999999999998999777778999
Q ss_pred HHHHHHhhcC--CceEEEEcCCCCCcCcCCCHHHHHHHHcC-C---CEEEEccCCccccCC----CchhhhhccCCcEEE
Q 014492 208 ELIADAVERE--KPKCIFLTSPNNPDGSIINDEDLLKILEM-P---ILVVLDEAYTEFSGL----ESRMEWVKKHDNLIV 277 (423)
Q Consensus 208 ~~l~~~i~~~--~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~---~~li~Deay~~~~~~----~~~~~~~~~~~~~i~ 277 (423)
++|++.+.+. +|.+|+++.++|+||.+.|.+++.++++. | +++++|.+|+.+... ...... .. +-..+
T Consensus 148 ~~L~~~i~~~~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~-~~-~vDsi 225 (380)
T PRK02769 148 DDLISKIKENKNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFSF-AD-GIDSI 225 (380)
T ss_pred HHHHHHHHhCCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccceeecccCccccCCc-cC-CCCEE
Confidence 9999999743 48899999999999999999999999987 6 699999999865421 001111 11 34567
Q ss_pred EccChhhhcccCccccccccCHHHHHHHHHhcC---------CCCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHH
Q 014492 278 LRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ---------PYNVSVAAEVAACAALQN--PIYLEKVKEALIKERERL 346 (423)
Q Consensus 278 i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~---------~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l 346 (423)
..|.+|.++ ....+|+++.+++..+.+..... ..+.+.....++..+|+. .+.+++..++..++.+++
T Consensus 226 s~s~HK~~~-~P~g~G~l~~r~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~la~~l 304 (380)
T PRK02769 226 AISGHKFIG-SPMPCGIVLAKKKYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYA 304 (380)
T ss_pred EECCcccCC-CCCCcEEEEEehhhhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
Confidence 788999654 44558988888776665431111 123344455555555553 345788888999999999
Q ss_pred HHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014492 347 FKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH 421 (423)
Q Consensus 347 ~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~ 421 (423)
.+.|++.+......+..+.+.++.|. +++. +|..+... .+++||.+....+.+.+++.++.
T Consensus 305 ~~~L~~~g~~~~~~p~~~~v~f~~~~----~~~~-----~~w~l~~~-----~~~~hi~~~~~~~~~~~~~f~~d 365 (380)
T PRK02769 305 VDRLQANGIPAWRNPNSITVVFPCPS----ERIW-----KKWHLATS-----GNQAHIITMPHHNKQQIDSLIDE 365 (380)
T ss_pred HHHHHhCCCEEEcCCCceEEEEcCCC----HHHH-----hCeeEccc-----CCEEEEEECCCCCHHHHHHHHHH
Confidence 99998876444455567777776552 2222 34444432 25899998754433444444443
No 274
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.77 E-value=1.4e-16 Score=151.71 Aligned_cols=265 Identities=18% Similarity=0.184 Sum_probs=183.7
Q ss_pred HHHHHHHhcCCCCCCC-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCeEEEcCCCchhhHHHHH
Q 014492 111 PEVREALGQLKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAA 188 (423)
Q Consensus 111 ~~v~~al~~~~~~~~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~ 188 (423)
.+..+++.+......+ +.+...++++++++++|+ ...+.++++|.|+.+++.++ ++|||+|++++-+|........
T Consensus 15 ~~e~~~v~~vl~sg~i~~G~~v~~FE~~~ae~~G~--k~ava~~sgT~AL~laL~al~ig~GDeVI~ps~TfvATan~i~ 92 (374)
T COG0399 15 EEELAAVQEVLKSGWLTGGPFVRRFEQAFAEYLGV--KYAVAVSSGTAALHLALLALAIGPGDEVIVPSFTFVATANAVL 92 (374)
T ss_pred hHHHHHHHHHHHcCCeecChHHHHHHHHHHHHhCC--CeEEEecChHHHHHHHHHhcCCCCCCEEEecCCchHHHHHHHH
Confidence 3445555553221222 333468999999999996 45777777888999999865 6999999999999999888888
Q ss_pred HCCCeEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCcccc-CCCch
Q 014492 189 VNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLESR 265 (423)
Q Consensus 189 ~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~-~~~~~ 265 (423)
..|++++.|+.| +.+.+|++.+|++|. +++|+|+. -+--|...+.+.|.+|++. |++||+|.+++..+ +.+..
T Consensus 93 ~~Ga~PVFvDid~~T~nid~~~ie~aIt-~~tKAIip---Vhl~G~~~dm~~i~~la~~~~l~vIEDaAqa~Ga~y~gk~ 168 (374)
T COG0399 93 LVGAKPVFVDIDPDTLNIDPDLIEAAIT-PRTKAIIP---VHLAGQPCDMDAIMALAKRHGLPVIEDAAQAHGATYKGKK 168 (374)
T ss_pred HcCCeEEEEecCCcccCCCHHHHHHHcc-cCCeEEEE---ehhccCCCCHHHHHHHHHHcCCeEEEEcchhccCeecCcc
Confidence 999999999976 568999999999998 67999994 4456888999999999998 99999999998665 33333
Q ss_pred hhhhccCCcEEEEccC--hhhhcccCcccccccc-CHHHHHHHHHhcCC------------------CCCcHHHHHHHHH
Q 014492 266 MEWVKKHDNLIVLRTF--SKRAGLAGLRVGYGAF-PLSIIEYLWRAKQP------------------YNVSVAAEVAACA 324 (423)
Q Consensus 266 ~~~~~~~~~~i~i~S~--SK~~g~~G~R~G~i~~-~~~~~~~l~~~~~~------------------~~~~~~~~~a~~~ 324 (423)
....++ +-+.|| +|.+.. | --|.++. ++++.++++..+.. +.++.+.++....
T Consensus 169 vGt~Gd----~~~fSF~~~K~itt-g-EGGav~tnd~ela~k~~~lr~hG~~~~~~~~y~~~~~G~N~rm~~iqAAigl~ 242 (374)
T COG0399 169 VGSFGD----IGAFSFHATKNLTT-G-EGGAVVTNDEELAEKARSLRNHGLSRDAVFKYLHEELGYNYRLTEIQAAIGLA 242 (374)
T ss_pred cccccc----eEEEEecCCCCccc-c-CceEEEeCCHHHHHHHHHHHHhCcCCCccccceeeecccccCHHHHHHHHHHH
Confidence 333322 556666 688863 3 3477777 45677766644211 1223333333333
Q ss_pred HhCChHHHHHHHHHHHHHHHHHHHHHccCCCCee--cCCCc---eE-EEEEeCC-CCCHHHHHHHHHhCCcEE
Q 014492 325 ALQNPIYLEKVKEALIKERERLFKLLKDVPFLNP--YPSYS---NF-ILCEVTS-GMDAKKLKDDLAKMGVMI 390 (423)
Q Consensus 325 ~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~p~~~---~~-~~~~~~~-~~~~~~l~~~L~~~gI~v 390 (423)
-| +.+++..++-++..++..+.|++++++.. .+... .+ ..+.+++ +.+.+.+.+.|.++||..
T Consensus 243 QL---~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~~~~~R~~l~~~L~~~gi~~ 312 (374)
T COG0399 243 QL---ERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDEEGISRDALMESLKEAGVGA 312 (374)
T ss_pred HH---HHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEecCCCCCHHHHHHHHHhCCCCc
Confidence 33 34555555556667777778887764432 22222 22 2344543 478899999999887664
No 275
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.77 E-value=4.4e-16 Score=153.57 Aligned_cols=311 Identities=17% Similarity=0.114 Sum_probs=205.3
Q ss_pred CCCHHHHHHHhc-CCCCC----CCCCc-c-hHHHHHHHHHHhCCC-C-CcEEE--eCCHHHHHHHHHHHhc--------C
Q 014492 108 GPPPEVREALGQ-LKFPY----IYPDP-E-SRRLRAALAKDSGLE-S-DHILV--GCGADELIDLIMRCVL--------D 168 (423)
Q Consensus 108 ~~~~~v~~al~~-~~~~~----~Y~~~-g-~~~lr~~ia~~~g~~-~-~~i~~--t~G~~~al~~~~~~l~--------~ 168 (423)
++.|++.+.+.. +.... .+|.. . .+++++.+++.+|++ + +++.. |+|++|++.+++.+.. .
T Consensus 52 ~~~p~~~~~~~~~l~~~~~np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~ 131 (431)
T TIGR01788 52 WMEPEARKLMDETINKNMIDKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEA 131 (431)
T ss_pred CCCHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHh
Confidence 445777777755 22111 12221 1 346788888889987 3 45554 8999999998876542 1
Q ss_pred CC-----CeEEEcCCCchhhHHHHHHCCCeEEEecCCCC-CCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHH
Q 014492 169 PG-----DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD-FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK 242 (423)
Q Consensus 169 ~g-----d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~ 242 (423)
.| ..|+++.-.|.++...++..|++++.+|.+.+ +.+|+++|++++. +++.+|+++..+|.||.+.|.+++.+
T Consensus 132 ~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~~~~~vd~~~L~~~i~-~~t~lV~~t~g~t~tG~idpi~~I~~ 210 (431)
T TIGR01788 132 AGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDPGRYVIDPEQVVEAVD-ENTIGVVCILGTTYTGEYEDVKALND 210 (431)
T ss_pred cCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCCCceeeCHHHHHHHHh-hCCeEEEEEeCCCCCcccCCHHHHHH
Confidence 12 36888999999999999999999999998754 5799999999997 67889999999999999999999999
Q ss_pred HHcC-------CCEEEEccCCcccc----CCCchhhhhccCCcEEEEccChhhhcccCccccccccCHH--HHHHHHHh-
Q 014492 243 ILEM-------PILVVLDEAYTEFS----GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS--IIEYLWRA- 308 (423)
Q Consensus 243 i~~~-------~~~li~Deay~~~~----~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~--~~~~l~~~- 308 (423)
+++. ++++++|.+|+.+. ...... .+....-.-+..|.+|.+ +....+|+++..+. +.+.+...
T Consensus 211 i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~-~~~~~~~DSis~s~HK~~-~~P~g~G~l~~r~~~~l~~~~~~~~ 288 (431)
T TIGR01788 211 ALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEW-DFRLPRVKSINVSGHKYG-LVYPGVGWVIWRDEEALPEELIFHV 288 (431)
T ss_pred HHHHHHhhhCCCceEEEecccHHHHHHHhCCCchh-hcCCCCceEEEECchhcc-CCCCCcEEEEEeChHHcchhheecc
Confidence 9973 69999999998543 111111 112233445777899953 33444788887543 22222100
Q ss_pred ---c--C---CCCCcHH--HHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeec-C-CCceEEEEEeCC--
Q 014492 309 ---K--Q---PYNVSVA--AEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPY-P-SYSNFILCEVTS-- 372 (423)
Q Consensus 309 ---~--~---~~~~~~~--~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p-~~~~~~~~~~~~-- 372 (423)
. . ....+.. ........|.. .+.+++..++..++.+++.+.|++.+.+.+. + ...+.+.+++++
T Consensus 289 ~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~iV~Fr~~~~~ 368 (431)
T TIGR01788 289 NYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIPLVAFKLKDDA 368 (431)
T ss_pred cccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceEEEEEeCCCC
Confidence 0 0 0111211 11222222222 2457788888899999999999998866643 3 356667777753
Q ss_pred --CCCHHHHHHHHHhCCcEEEeCCCC---CCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 373 --GMDAKKLKDDLAKMGVMIRHYNNK---ELKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 373 --~~~~~~l~~~L~~~gI~v~~~~~~---~~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
+.+..++.+.|.++|+.+.....+ .+.-++|+++. +....++|.+.|+.
T Consensus 369 ~~~~~~~~l~~~L~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~ 425 (431)
T TIGR01788 369 DPGYTLYDLSHRLRERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEA 425 (431)
T ss_pred CCCcCHHHHHHHHHHCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHH
Confidence 357788999999999977544331 22347899985 23344555555543
No 276
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.77 E-value=5e-16 Score=154.83 Aligned_cols=323 Identities=14% Similarity=0.173 Sum_probs=203.9
Q ss_pred CCCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-CC---CCC-CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492 91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LK---FPY-IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (423)
Q Consensus 91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~---~~~-~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~ 162 (423)
+..++.++|+..+ ...++ .+|+|.+|+.+ +. ... .++.+...+|.+.+++...-..+.+++++++++|++.+
T Consensus 78 D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~A 157 (459)
T PRK11522 78 DTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAA 157 (459)
T ss_pred ECCCCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCcccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCchHHHHHH
Confidence 3557889999877 44454 46889888876 22 112 23444556777888877653446899999999999999
Q ss_pred HHHhc---C-CC-CeEEEcCCCchhhHHHHHH-CCCeEEE---ecCCCCC----CCCHHHHHHHhhc-----CCceEEEE
Q 014492 163 MRCVL---D-PG-DKIVDCPPTFTMYEFDAAV-NGAAVVK---VPRKSDF----SLNVELIADAVER-----EKPKCIFL 224 (423)
Q Consensus 163 ~~~l~---~-~g-d~Vl~~~p~y~~~~~~~~~-~g~~~~~---v~~~~~~----~~d~~~l~~~i~~-----~~~~~i~l 224 (423)
++... . +| ..|+....+|++....+.. .|-.... .|..++. -.|.+++++.++. .++.+|++
T Consensus 158 lklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAavIv 237 (459)
T PRK11522 158 LKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAVIL 237 (459)
T ss_pred HHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEEEE
Confidence 88432 1 22 4688888888765443322 2211111 1111110 1267888877752 35678888
Q ss_pred cCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCchh--hhhccCCcEEEEccChhhhcccC-ccccccc
Q 014492 225 TSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAG-LRVGYGA 296 (423)
Q Consensus 225 ~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~i~S~SK~~g~~G-~R~G~i~ 296 (423)
...+...|.+.+ .+++.++|+. |+++|+||++..|...+... ...+..+.++ +++|.+| .| +.+|.++
T Consensus 238 Epv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDiv---t~gK~lg-gG~~Pigav~ 313 (459)
T PRK11522 238 EPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENVQPDIL---CLAKALG-GGVMPIGATI 313 (459)
T ss_pred ecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhhhhhccCCCCCEE---Eechhhh-CCCccceeEE
Confidence 877888899887 6677778876 99999999998764333221 1112223322 6799998 67 6899999
Q ss_pred cCHHHHHHHHH----hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc----CC-CCeecCCCceEEE
Q 014492 297 FPLSIIEYLWR----AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKD----VP-FLNPYPSYSNFIL 367 (423)
Q Consensus 297 ~~~~~~~~l~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~-~~~~~p~~~~~~~ 367 (423)
+.+++.+.+.. ....|+.++++.+++.+.|+.-+- +...++.+++-++|.+.|++ .+ .+.-..+.|.++.
T Consensus 314 ~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~-~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~Gl~~g 392 (459)
T PRK11522 314 ATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLE-QNLPAQAEQKGDYLLDGFRQLAREYPDLVQEARGKGMLMA 392 (459)
T ss_pred EcHHHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEeceeEEE
Confidence 99988876642 123356688888888877764111 13445555555666666554 33 2222345688888
Q ss_pred EEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC---hhhHHHHHHHHh
Q 014492 368 CEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK---PEHTDALMECLM 420 (423)
Q Consensus 368 ~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~---~~~~~~l~~al~ 420 (423)
+.+.+......+.+.|.++||++.+.. ...+.+||.+.. .++.+++.++++
T Consensus 393 iel~~~~~~~~i~~~l~~~Gvl~~~~~--~~~~~lr~~Ppl~~t~~~id~~l~~l~ 446 (459)
T PRK11522 393 IEFVDNEIGYNFASEMFRQRVLVAGTL--NNAKTIRIEPPLTLTIEQCEQVLKAAR 446 (459)
T ss_pred EEecCchHHHHHHHHHHHCCeEEEecC--CCCCEEEEECCccCCHHHHHHHHHHHH
Confidence 888643335678888999999997643 234789999763 444454444443
No 277
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.77 E-value=2.4e-16 Score=153.28 Aligned_cols=274 Identities=16% Similarity=0.165 Sum_probs=181.2
Q ss_pred CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCch----hhHHHHHHCCCeEEEecCCCC
Q 014492 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT----MYEFDAAVNGAAVVKVPRKSD 202 (423)
Q Consensus 127 ~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~----~~~~~~~~~g~~~~~v~~~~~ 202 (423)
.+|...+|++.++++.|. +..+++++++.|+.+++.+++++||+|+++.+.|. .+...+...|++++.++.++.
T Consensus 62 ~~P~~~~lE~~la~leg~--~~av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~~~~ 139 (384)
T PRK06434 62 GNPTVQAFEEKYAVLENA--EHALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDTDRL 139 (384)
T ss_pred CChhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEECCCCh
Confidence 556678999999999985 35677777779999999999999999999887664 333556678999999986432
Q ss_pred CCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccC
Q 014492 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF 281 (423)
Q Consensus 203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~ 281 (423)
..++ ++..++++|++.+|.|||+.+.+.+++.++++. + +++|.++..... ..+. ..+-.+++.|.
T Consensus 140 ~~~~-------l~~~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~~s~~~-~~pl----~~gaDivv~S~ 205 (384)
T PRK06434 140 NSLD-------FDPSNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFASPYN-QNPL----DLGADVVIHSA 205 (384)
T ss_pred hhee-------ecCCCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCCCCccc-CCch----hcCCCEEEeec
Confidence 2222 333478999999999999999999999999987 6 567999752221 1222 23445899999
Q ss_pred hhhhcccC-cccccccc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCe
Q 014492 282 SKRAGLAG-LRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLN 357 (423)
Q Consensus 282 SK~~g~~G-~R~G~i~~-~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 357 (423)
+|.++.+| .=.|.++. ++++.++++..... ...++.....+.. ..+.++.+.++.+++...+.+.|++.+.+.
T Consensus 206 tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~---gL~tL~~R~~r~~~~a~~~a~~L~~~p~v~ 282 (384)
T PRK06434 206 TKYISGHSDVVMGVAGTNNKSIFNNLVERRKTLGSNPDPIQAYLALR---GLKTLGLRMEKHNKNGMELARFLRDSKKIS 282 (384)
T ss_pred ccccCCCCCceEEEEecCcHHHHHHHHHHHHhcCCCCCHHHHHHHHh---CCCcHHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 99886433 32466766 55666666644322 3445544333333 334567777788889999999999887653
Q ss_pred --ecCC----------CceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC-----------------------CCCCCeE
Q 014492 358 --PYPS----------YSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN-----------------------KELKGYV 402 (423)
Q Consensus 358 --~~p~----------~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~-----------------------~~~~~~i 402 (423)
.+|+ .|..+.+++.+......|.+.|.--.+.+.-|+. .-.++.|
T Consensus 283 ~V~yPgl~~~~~~~~g~g~~~sf~l~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~e~~~~~gi~~~li 362 (384)
T PRK06434 283 NVYYPDTEIGKKVLRGFGGMLSFELRSMEDVHKFIRNLEIPMVAASLGGVESLITLPVETSHSSLSPEERERLGISDNLV 362 (384)
T ss_pred EEECCChHHHHHhcCCCCceEEEEECCHHHHHHHHHhCCcceEccCCCCCCeeeECCCccccccCCHHHHHhcCCCcCeE
Confidence 2443 4667778885222233444444211111111110 0124689
Q ss_pred EEEecChhhHHHHHHHHh
Q 014492 403 RVSVGKPEHTDALMECLM 420 (423)
Q Consensus 403 Ris~~~~~~~~~l~~al~ 420 (423)
|||++.++ .++|.+-|+
T Consensus 363 RlsvGlEd-~~dLi~dl~ 379 (384)
T PRK06434 363 RFSIGIED-IDDLIKDIE 379 (384)
T ss_pred EEEeCcCC-HHHHHHHHH
Confidence 99999875 466655544
No 278
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.76 E-value=4.5e-16 Score=153.81 Aligned_cols=325 Identities=15% Similarity=0.175 Sum_probs=192.1
Q ss_pred CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CC-CCCC----CCCcchHHHHHHHHHHhCCC--C-CcEEE-eCCHHH
Q 014492 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LK-FPYI----YPDPESRRLRAALAKDSGLE--S-DHILV-GCGADE 157 (423)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~-~~~~----Y~~~g~~~lr~~ia~~~g~~--~-~~i~~-t~G~~~ 157 (423)
+.+++.+||+..+. ..++ .+|++.+++.+ +. ..+. +......+|-+.+++....+ . +.+++ ++++++
T Consensus 31 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGse 110 (412)
T TIGR02407 31 DEDGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGIIHSLDMATEAKREFLETFNEIILKPRGLDYKVQFPGPTGTN 110 (412)
T ss_pred eCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhccceeccccCcHHHHHHHHHHHHhccCccCCCceEEEeCCCchH
Confidence 45678899997763 3333 47899998876 32 1111 11222345666666653111 1 24655 589999
Q ss_pred HHHHHHHHhc--CCCCeEEEcCCCchhhHHHHHH-CC------------CeEEEecCCCCCC---CCHHHHHHHhhc---
Q 014492 158 LIDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKSDFS---LNVELIADAVER--- 216 (423)
Q Consensus 158 al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g------------~~~~~v~~~~~~~---~d~~~l~~~i~~--- 216 (423)
+++.+++... ....+|+....+|++....+.. .| ..++.+|.++-.. -+++.+++.+.+
T Consensus 111 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~ 190 (412)
T TIGR02407 111 AVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSS 190 (412)
T ss_pred HHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccC
Confidence 9999988542 2236788888888755543322 11 1223344221111 246778887753
Q ss_pred --CCceEEEEcCCCCCcCc-CCCHHHHHHHHcC----CCEEEEccCCccccCCCchhh--hhccCCcEEEEccChhhhcc
Q 014492 217 --EKPKCIFLTSPNNPDGS-IINDEDLLKILEM----PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGL 287 (423)
Q Consensus 217 --~~~~~i~l~~p~NPtG~-~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~g~ 287 (423)
+++.+|++...+++.|. +.+.+.+++|.+. |+++|+||++..|...+.... ..+..+. +.+++|.++.
T Consensus 191 ~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v~PD---i~~~~K~lg~ 267 (412)
T TIGR02407 191 GVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGIEPD---IVCLSKSISG 267 (412)
T ss_pred CCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCCCCC---EEEechhccC
Confidence 35678888878888998 5577767666553 999999999987643222211 1112222 2357899983
Q ss_pred cCccccccccCHHHHHHHHH--hcCCCCCcHHHHHHHHHHhC----ChHHHHHHHHHHHHHHHHHHHHHccCC-CCeecC
Q 014492 288 AGLRVGYGAFPLSIIEYLWR--AKQPYNVSVAAEVAACAALQ----NPIYLEKVKEALIKERERLFKLLKDVP-FLNPYP 360 (423)
Q Consensus 288 ~G~R~G~i~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~l~----~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~p 360 (423)
.|+|+|++++++++ +.+.. ....|+.++++..++.++++ +++..+...+.-+..++++.+..+..+ .+...+
T Consensus 268 ~G~pigav~~~~~~-~~~~~~~~~~T~~gnpl~~aaa~a~l~~~i~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vr 346 (412)
T TIGR02407 268 YGLPLALTLIKPEL-DVWKPGEHNGTFRGNNLAFVTATAALEYYWSDDAFEKAVQRKSEIIQERLDRIVAEYPELIKQVR 346 (412)
T ss_pred CccceeEEEEchhh-hccCCCccCCCCCccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhCCCceEeee
Confidence 39999999998875 44422 22346677776655555443 333333322222223333333223344 223346
Q ss_pred CCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014492 361 SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH 421 (423)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~ 421 (423)
..|.++|+++++......+.+.+.++||.+.+.+. ..+.|||+.....+.+++.++++.
T Consensus 347 g~Gl~~~l~l~~~~~~~~~~~~~~~~Gv~v~~~~~--~~~~lr~~p~l~~t~~~i~~~~~~ 405 (412)
T TIGR02407 347 GRGLMQGIECGDGDLAGKIAKAAFENGLIIETSGP--NDEVIKLLPPLTIDEETLQQGLDI 405 (412)
T ss_pred cceeEEEEEecChHHHHHHHHHHHHCCCEEeccCC--CCCEEEEECCCCCCHHHHHHHHHH
Confidence 77899999997554567888899999999987532 246899998743333455555544
No 279
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.76 E-value=1.7e-16 Score=154.71 Aligned_cols=251 Identities=18% Similarity=0.188 Sum_probs=175.8
Q ss_pred cchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC-CCCCCC
Q 014492 129 PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLN 206 (423)
Q Consensus 129 ~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~d 206 (423)
+...++++++++++|. ++++.+++++.|+.+++.++ +++||+|+++.-+|..........|++++.++.+ +++.+|
T Consensus 25 ~~~~~fE~~~a~~~g~--~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id 102 (363)
T PF01041_consen 25 PYVEEFEKEFAEYFGV--KYAVAVSSGTSALHLALRALGLGPGDEVIVPAYTFPATASAILWAGAEPVFVDIDPETLNID 102 (363)
T ss_dssp HHHHHHHHHHHHHHTS--SEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-THHHHHHHHTT-EEEEE-BETTTSSB-
T ss_pred HHHHHHHHHHHHHhCC--CeEEEeCChhHHHHHHHHhcCCCcCceEecCCCcchHHHHHHHHhccEEEEEeccCCcCCcC
Confidence 3468999999999994 67888888999999999987 5789999999999999999999999999999976 789999
Q ss_pred HHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccC-CCchhhhhccCCcEEEEccC--h
Q 014492 207 VELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSG-LESRMEWVKKHDNLIVLRTF--S 282 (423)
Q Consensus 207 ~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~-~~~~~~~~~~~~~~i~i~S~--S 282 (423)
++.+++.+. +++|+|++.| .-|...+.+++.++|+. |++||+|.+++.+.. .+......+ .+.+.|| +
T Consensus 103 ~~~~~~~i~-~~t~ai~~~h---~~G~~~d~~~i~~~~~~~~i~lIeD~a~a~g~~~~g~~~G~~g----d~~~fSf~~~ 174 (363)
T PF01041_consen 103 PEALEKAIT-PKTKAILVVH---LFGNPADMDAIRAIARKHGIPLIEDAAQAFGARYKGRPVGSFG----DIAIFSFHPT 174 (363)
T ss_dssp HHHHHHHHH-TTEEEEEEE----GGGB---HHHHHHHHHHTT-EEEEE-TTTTT-EETTEETTSSS----SEEEEESSTT
T ss_pred HHHHHHHhc-cCccEEEEec---CCCCcccHHHHHHHHHHcCCcEEEccccccCceeCCEeccCCC----CceEecCCCC
Confidence 999999998 7899999654 45788899999999986 999999999996552 222222222 2666666 6
Q ss_pred hhhcccCccccccccC-HHHHHHHHHhcCC-------------------CCCcHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 014492 283 KRAGLAGLRVGYGAFP-LSIIEYLWRAKQP-------------------YNVSVAAEVAACAALQNPIYLEKVKEALIKE 342 (423)
Q Consensus 283 K~~g~~G~R~G~i~~~-~~~~~~l~~~~~~-------------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 342 (423)
|.+. .|. -|+++.+ +++.++++..+.. +.++.+..+.+..-| +.+++..++-+++
T Consensus 175 K~i~-~ge-GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~rm~~~~AAigl~QL---~~L~~~~~~R~~~ 249 (363)
T PF01041_consen 175 KIIT-TGE-GGAVVTNDPELAERARALRNHGRSRDAFRRYRHELPPGYNFRMSELQAAIGLAQL---KRLDEIIARRREN 249 (363)
T ss_dssp SSS--SSS--EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSSS--B-B-BHHHHHHHHHHH---HTHHHHHHHHHHH
T ss_pred CCCc-CCC-CeeEEecHHHHHHHhhhhhccCcCccccccccccccCCcccccHHHHHHHHHHHH---HHhhhhHHHHHHH
Confidence 8774 332 3777774 6677777654321 234455544444444 3356666666788
Q ss_pred HHHHHHHHccCCCCee--cCCCc----e-EEEEEeCCC--CCHHHHHHHHHhCCcEEEeCC
Q 014492 343 RERLFKLLKDVPFLNP--YPSYS----N-FILCEVTSG--MDAKKLKDDLAKMGVMIRHYN 394 (423)
Q Consensus 343 ~~~l~~~L~~~~~~~~--~p~~~----~-~~~~~~~~~--~~~~~l~~~L~~~gI~v~~~~ 394 (423)
.+++.+.|.+++++.. .+.+. . .+.+.+++. .+.+++.+.|.++||.+....
T Consensus 250 a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~rd~l~~~L~~~GI~~~~~~ 310 (363)
T PF01041_consen 250 AQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEALADRDELVEALRARGIETRPHY 310 (363)
T ss_dssp HHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCGCSTHHHHHHHHHHTTBEEBCST
T ss_pred HHHHHHHHhcCCCcccccccccccccccccccccccccccchHHHHHHHHHHCCCcccccc
Confidence 8889999999886542 12221 2 234556533 468999999999999998654
No 280
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.76 E-value=5.3e-16 Score=155.01 Aligned_cols=318 Identities=15% Similarity=0.106 Sum_probs=198.1
Q ss_pred CeeEcCCCCCCCCCCHHHHHHHhc-C--CCCCCCC------C-cchHHHHH----HHHHHhCCCCCcEEE---eCCHHHH
Q 014492 96 DIVKIDANENPYGPPPEVREALGQ-L--KFPYIYP------D-PESRRLRA----ALAKDSGLESDHILV---GCGADEL 158 (423)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~-~--~~~~~Y~------~-~g~~~lr~----~ia~~~g~~~~~i~~---t~G~~~a 158 (423)
+-|.|-.+||.. ++.+.+++.. + .+..+|| . ....++++ ...+.|+.+.+.+++ .++++.+
T Consensus 35 ~~l~liasen~~--s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~~~~~~~~~nv~~~SG~~A 112 (475)
T PLN03226 35 KGLELIASENFT--SRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFRLDPEKWGVNVQPLSGSPA 112 (475)
T ss_pred cCeeEecCCccC--CHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhCCCcceeEEecCcCchHHH
Confidence 458888888876 4778888765 2 2333332 1 12334443 344556766655544 2445567
Q ss_pred HHHHHHHhcCCCCeEEEcCC---CchhhHHH---HHHCCCeEE----EecC-CCCCCCCHHHHHHHhhcCCceEEEEcCC
Q 014492 159 IDLIMRCVLDPGDKIVDCPP---TFTMYEFD---AAVNGAAVV----KVPR-KSDFSLNVELIADAVEREKPKCIFLTSP 227 (423)
Q Consensus 159 l~~~~~~l~~~gd~Vl~~~p---~y~~~~~~---~~~~g~~~~----~v~~-~~~~~~d~~~l~~~i~~~~~~~i~l~~p 227 (423)
+..++.++++|||+|+..+. .|..+... .+..+.... .+.. .+++.+|++++++.+.+.++++|++. .
T Consensus 113 N~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~~~~pklIv~~-~ 191 (475)
T PLN03226 113 NFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTGLIDYDKLEKKAMLFRPKLIIAG-A 191 (475)
T ss_pred HHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCCCCCcCHHHHHHHHhhcCCeEEEEe-c
Confidence 77888889999999998542 22222111 111222221 2322 24568999999999976688877653 3
Q ss_pred CCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHH----
Q 014492 228 NNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII---- 302 (423)
Q Consensus 228 ~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~---- 302 (423)
++ +|...|.+++.+||+. |+++++|++|............. .....++++|++|.+ .|.+-|+++++++.+
T Consensus 192 S~-~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p-~~~~Div~~t~hK~L--~GP~Gg~I~~~~~~~~~~~ 267 (475)
T PLN03226 192 SA-YPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAASP-FEYCDVVTTTTHKSL--RGPRGGMIFFRKGPKPPKG 267 (475)
T ss_pred Cc-CCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCC-CCCCeEEEecCcccc--cCCCceEEEEchhhccccc
Confidence 33 7899999999999998 99999999998544222111110 113458899999987 233348888877544
Q ss_pred -------HH---HHHhcCC---CCCcHHHHHHHHHHhCCh--HHHHHHHHHHHHHHHHHHHHHccCCCCeecC--CCceE
Q 014492 303 -------EY---LWRAKQP---YNVSVAAEVAACAALQNP--IYLEKVKEALIKERERLFKLLKDVPFLNPYP--SYSNF 365 (423)
Q Consensus 303 -------~~---l~~~~~~---~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p--~~~~~ 365 (423)
+. +.....+ .+++.....++..+++.- ...++.++++.++.++|.+.|.+.+ +.+.. .....
T Consensus 268 ~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~G-~~l~~~~t~~hi 346 (475)
T PLN03226 268 QGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMSKG-YKLVTGGTDNHL 346 (475)
T ss_pred CCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhCC-CEEEcCCCCCCE
Confidence 22 1111111 233444444445555431 1246678899999999999998865 44333 23466
Q ss_pred EEEEe-CCCCCHHHHHHHHHhCCcEEEeCCC-----CCCCCeEEEEec-------ChhhHHHHHHHHhh
Q 014492 366 ILCEV-TSGMDAKKLKDDLAKMGVMIRHYNN-----KELKGYVRVSVG-------KPEHTDALMECLMH 421 (423)
Q Consensus 366 ~~~~~-~~~~~~~~l~~~L~~~gI~v~~~~~-----~~~~~~iRis~~-------~~~~~~~l~~al~~ 421 (423)
+++++ +.+.+..++.+.|.+.||.+..+.- +-.+..||++.. .+++++++.+.|.+
T Consensus 347 ~lv~~~~~gi~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i~~ 415 (475)
T PLN03226 347 VLWDLRPLGLTGSRVEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLHR 415 (475)
T ss_pred EEEEccCCCCCHHHHHHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCCCCHHHHHHHHHHHHH
Confidence 77787 5577888999999999999975432 223567999532 35566777666654
No 281
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.76 E-value=2.8e-16 Score=152.73 Aligned_cols=300 Identities=14% Similarity=0.101 Sum_probs=197.7
Q ss_pred CCCCCCHHHHHHHhcCC-----CCCCCCCc--chHHHHHHHHHHhCCCC-CcEEEe-CCHHHHHHHHHHHhcCCCCeEEE
Q 014492 105 NPYGPPPEVREALGQLK-----FPYIYPDP--ESRRLRAALAKDSGLES-DHILVG-CGADELIDLIMRCVLDPGDKIVD 175 (423)
Q Consensus 105 ~~~~~~~~v~~al~~~~-----~~~~Y~~~--g~~~lr~~ia~~~g~~~-~~i~~t-~G~~~al~~~~~~l~~~gd~Vl~ 175 (423)
.|...++++++++.... .+++-+.. -..+.|+.+++++++++ .+|+++ +|++.+++.++..++.+ +.+++
T Consensus 10 GP~~~~~~v~~a~~~~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~~~-~~l~i 88 (361)
T TIGR01366 10 GPSKVRLEQLQALTTTAASLFGTSHRQAPVKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLIEK-KSLHL 88 (361)
T ss_pred CCcCCCHHHHHHHHhcCccccccCcCChHHHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhcccc-cccEE
Confidence 34455789999987521 12333333 36789999999999854 478886 55999999999988743 33444
Q ss_pred cCCCch-hhHHHHHH--CCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEE
Q 014492 176 CPPTFT-MYEFDAAV--NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVV 251 (423)
Q Consensus 176 ~~p~y~-~~~~~~~~--~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li 251 (423)
..-.|. .+...++. ++.++..++.+.+..++. .+. +++++|.+++..|.||.+.|.+++ ++. |++++
T Consensus 89 ~~G~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~lV~~~h~et~tG~~~pi~~I---~~~~g~~~i 159 (361)
T TIGR01366 89 SFGEFSSKFAKAVKLAPWLGEPIIVTADPGSAPEP-----QAD-PGVDVIAWAHNETSTGVAVPVRRP---EGSDDALVV 159 (361)
T ss_pred ecCHHHHHHHHHHHhhhccCCceEEecCCCCCCCC-----ccC-CCCCEEEEcccCCccceecccccc---cccCCCeEE
Confidence 455564 44445554 233566666444433333 233 689999999999999999998887 454 99999
Q ss_pred EccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHh-----------------------
Q 014492 252 LDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA----------------------- 308 (423)
Q Consensus 252 ~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~----------------------- 308 (423)
+|.+.+..... -... . -.+++.|..|.+|.+|- +++++.+++.++++...
T Consensus 160 VDavqs~g~~~-idv~---~--~D~~~~s~~K~lg~~~G-l~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~ 232 (361)
T TIGR01366 160 IDATSGAGGLP-VDIA---E--TDVYYFAPQKNFASDGG-LWLAIMSPAALERIEAIAASGRWVPEFLSLPTAVDNSLKN 232 (361)
T ss_pred EEcCccccCCC-CCHH---H--CCEEEEEchhhcCCCCc-eEEEEECHHHHhhhhcccCCCCCCchhhhHHHHHhccccC
Confidence 99998844321 1111 1 34788999999987752 55556678777665421
Q ss_pred cCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeecC-CC---c-eEEEEEeCCCCCHHHHH
Q 014492 309 KQPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPYP-SY---S-NFILCEVTSGMDAKKLK 380 (423)
Q Consensus 309 ~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p-~~---~-~~~~~~~~~~~~~~~l~ 380 (423)
..+++++.....++.++++. ...++...++.++..+++++.|++++++.+.. .. . ....+.++++.+..++.
T Consensus 233 ~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~~~g~~~~~v~ 312 (361)
T TIGR01366 233 QTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDFVDDIDAATVA 312 (361)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEECCCccCHHHHH
Confidence 11233444444455555543 21367778889999999999999988654331 11 1 11234456688999999
Q ss_pred HHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 381 DDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 381 ~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
+.|.++||.+.++......+.+|||+. +.++.++|.++|+.
T Consensus 313 ~~L~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~ 356 (361)
T TIGR01366 313 KILRANGIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDW 356 (361)
T ss_pred HHHHHCCCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHH
Confidence 999989999976543333568999975 56677777777765
No 282
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.75 E-value=6e-16 Score=152.00 Aligned_cols=316 Identities=15% Similarity=0.132 Sum_probs=193.7
Q ss_pred CCCCCeeEcCCC--CCCCC-CCHHHHHHHhcC-C-CCCCCCCcchHHHHHHHHHHhCC--CCCcEEEeCCHHHHHHHHHH
Q 014492 92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQL-K-FPYIYPDPESRRLRAALAKDSGL--ESDHILVGCGADELIDLIMR 164 (423)
Q Consensus 92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~~-~-~~~~Y~~~g~~~lr~~ia~~~g~--~~~~i~~t~G~~~al~~~~~ 164 (423)
..++.++|+..+ ...++ .+|++.+++.+. . ..+.+.. ...+.+..+++.+.- ..+.++++++++++++.+++
T Consensus 33 ~dG~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~-~~~~~~~~la~~l~~~~~~~~v~f~~SGseA~e~Aik 111 (395)
T PRK03715 33 HNGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLINPSPA-FYNEPMAKLAGLLTQHSCFDKVFFANSGAEANEGAIK 111 (395)
T ss_pred CCCCEEEECCcChhhccCCCCCHHHHHHHHHHHHhccccccc-ccCHHHHHHHHHHhhccCCCEEEEeCCcHHHHHHHHH
Confidence 456789999765 23343 368898888762 2 1111211 123344455555431 23689999999999999998
Q ss_pred Hhc------CCC-CeEEEcCCCchhhHHHH-HHCCCeEE---EecCCCCC----CCCHHHHHHHhhcCCceEEEEcCCCC
Q 014492 165 CVL------DPG-DKIVDCPPTFTMYEFDA-AVNGAAVV---KVPRKSDF----SLNVELIADAVEREKPKCIFLTSPNN 229 (423)
Q Consensus 165 ~l~------~~g-d~Vl~~~p~y~~~~~~~-~~~g~~~~---~v~~~~~~----~~d~~~l~~~i~~~~~~~i~l~~p~N 229 (423)
... ++| .+|+.....|+.....+ ...|.... ..|...++ ..|++++++.+. .++.+|++...++
T Consensus 112 ~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~aavi~Epv~~ 190 (395)
T PRK03715 112 LARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLIT-DKTVAVMLEPVQG 190 (395)
T ss_pred HHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcC-CCceEEEEeCCcC
Confidence 664 123 56888888887544333 23332211 11111111 247899999886 5788999888888
Q ss_pred CcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCchh--hhhccCCcEEEEccChhhhcccCccccccccCHHHH
Q 014492 230 PDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII 302 (423)
Q Consensus 230 PtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~ 302 (423)
..|.+.+ .+++.++|+. |+++|+||+|..|...+... ...+..+. +.+++|.+| .|+.+|.+++++++.
T Consensus 191 ~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv~PD---i~t~gK~lg-~G~p~~av~~~~~i~ 266 (395)
T PRK03715 191 EGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPD---IMTLGKGIG-GGVPLAALLAKAEVA 266 (395)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCCCCc---eeeehhhhh-CCcceEEEEEccccc
Confidence 8888876 6677777776 99999999999765433221 12222222 346789998 689999999888875
Q ss_pred HHHHH-hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc----CCCCeecCCCceEEEEEeCCCCCHH
Q 014492 303 EYLWR-AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKD----VPFLNPYPSYSNFILCEVTSGMDAK 377 (423)
Q Consensus 303 ~~l~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~p~~~~~~~~~~~~~~~~~ 377 (423)
..... ....|+.++++..++.+.|+.-+ -++..++.+++.+++.+.|++ .+ +....+.|.++.+.+.+ ....
T Consensus 267 ~~~~~~~~~T~~g~pl~~aaala~L~~l~-~~~l~~~~~~~g~~l~~~L~~l~~~~~-i~~vrG~Glm~~i~l~~-~~~~ 343 (395)
T PRK03715 267 VFEAGDQGGTYNGNPLMTAVGVAVISQLL-APGFLEGVRARGEYLKEKLLELSEERG-LEGERGEGLLRALLLGK-DIGP 343 (395)
T ss_pred cccCCCcCCCCCCCHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHhhcCC-cCeEEcceeEEEEEecC-chHH
Confidence 21111 12346678888887877775422 123455555566666666554 34 22234667888888853 1234
Q ss_pred HHHHHHHhC---CcEEEeCCCCCCCCeEEEEecC---hhhHHHHHHHHh
Q 014492 378 KLKDDLAKM---GVMIRHYNNKELKGYVRVSVGK---PEHTDALMECLM 420 (423)
Q Consensus 378 ~l~~~L~~~---gI~v~~~~~~~~~~~iRis~~~---~~~~~~l~~al~ 420 (423)
.+.+.+.+. ||++.... .+.+||++.. .++.+++.++|+
T Consensus 344 ~~~~~~~~~~~~Gi~~~~~~----~~~lR~~p~l~~t~~ei~~~~~~l~ 388 (395)
T PRK03715 344 QIVEKARDMQPDGLLLNAPR----PNLLRFMPALNVTTEEIDQMIAMLR 388 (395)
T ss_pred HHHHHHHhccCCCEEEeecC----CCEEEEeCCcccCHHHHHHHHHHHH
Confidence 566555555 99987543 3689999864 444444444443
No 283
>PLN02271 serine hydroxymethyltransferase
Probab=99.75 E-value=2.2e-15 Score=148.66 Aligned_cols=318 Identities=16% Similarity=0.100 Sum_probs=210.0
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhcC---CCCCCCC------Ccc-hHHH----HHHHHHHhCCCC----CcEEEeCCHH
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQL---KFPYIYP------DPE-SRRL----RAALAKDSGLES----DHILVGCGAD 156 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~---~~~~~Y~------~~g-~~~l----r~~ia~~~g~~~----~~i~~t~G~~ 156 (423)
.+-|.|-.+||-. ++.+.+++... .+..+|| ... ..++ .+...+.||.++ -+|..-+|+.
T Consensus 148 ~~~l~LIASEN~~--S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~SGs~ 225 (586)
T PLN02271 148 FKGIELIASENFV--CRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPYSCTS 225 (586)
T ss_pred hcCeeeccccccC--CHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceeeccHHH
Confidence 3458888888866 58888888762 2223332 211 2233 344445678766 5777776665
Q ss_pred HHHHHHHHHhcCCCCeEEEcCCCchhhHHH---------HHHCCCeEEEec--CC-CCCCCCHHHHHHHhhcCCceEEEE
Q 014492 157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFD---------AAVNGAAVVKVP--RK-SDFSLNVELIADAVEREKPKCIFL 224 (423)
Q Consensus 157 ~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---------~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~~~~~~i~l 224 (423)
|+..++.++++|||+|+..+..|.++... +...|..+..+| .+ +++.+|.+++++.....+||+|++
T Consensus 226 -AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~~rPKLII~ 304 (586)
T PLN02271 226 -ANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALDFRPKILIC 304 (586)
T ss_pred -HHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHHHHhhhcCCeEEEE
Confidence 77778888999999999988777644332 233465544444 53 457899999999665689999998
Q ss_pred cCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHH---
Q 014492 225 TSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS--- 300 (423)
Q Consensus 225 ~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~--- 300 (423)
..-.+| ..+|.+++.+||+. |+++++|.+|....-........ .....++.+|.+|.+ .|-|-|.++.+++
T Consensus 305 g~Sayp--r~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP-~~~aDvvt~TTHKtL--rGPrGG~I~~r~~~~~ 379 (586)
T PLN02271 305 GGSSYP--REWDYARFRQIADKCGAVLMCDMAHISGLVAAKECVNP-FDYCDIVTSTTHKSL--RGPRGGIIFYRKGPKL 379 (586)
T ss_pred Cchhcc--CcCCHHHHHHHHHHcCCEEEEECcccccccccCcCCCC-CcCCcEEEeCCcccC--CCCCceEEEecccccc
Confidence 877888 78999999999997 99999999997543211111110 112458999999975 5666788887643
Q ss_pred -----------------HHHHHHHhcCCC---CCcHHHHHHHHHHhC---ChHHHHHHHHHHHHHHHHHHHHHccCCCCe
Q 014492 301 -----------------IIEYLWRAKQPY---NVSVAAEVAACAALQ---NPIYLEKVKEALIKERERLFKLLKDVPFLN 357 (423)
Q Consensus 301 -----------------~~~~l~~~~~~~---~~~~~~~~a~~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 357 (423)
+.+++.....|. ++.....++...++. .++| .+..+++.+|.+.|.+.|.+.++-.
T Consensus 380 ~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~ef-k~Ya~QVv~NAkaLA~~L~~~G~~v 458 (586)
T PLN02271 380 RKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEY-KAYMQQVKKNAQALASALLRRKCRL 458 (586)
T ss_pred cccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHH-HHHHHHHHHHHHHHHHHHHHCCCeE
Confidence 455555544442 111122333344444 3454 7888889999999999998887544
Q ss_pred ecC-CCceEEEEEeCC-CCCHHHHHHHHHhCCcEEEe----CCC-CCCCCeEEEEec-------ChhhHHHHHHHHhh
Q 014492 358 PYP-SYSNFILCEVTS-GMDAKKLKDDLAKMGVMIRH----YNN-KELKGYVRVSVG-------KPEHTDALMECLMH 421 (423)
Q Consensus 358 ~~p-~~~~~~~~~~~~-~~~~~~l~~~L~~~gI~v~~----~~~-~~~~~~iRis~~-------~~~~~~~l~~al~~ 421 (423)
+.. .....+++++.. +.+...+.+.|.+.||.+.. +.. +..++.|||... .+++++++.+.|.+
T Consensus 459 v~ggTdnHlvLvDl~~~g~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~ 536 (586)
T PLN02271 459 VTGGTDNHLLLWDLTTLGLTGKNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFLLR 536 (586)
T ss_pred eeCCCCcceeeecCcccCCCHHHHHHHHHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcCCCcHHHHHHHHHHHH
Confidence 432 233456788853 56778888888899999963 332 334678999853 35667777666654
No 284
>PLN03032 serine decarboxylase; Provisional
Probab=99.74 E-value=9.9e-16 Score=148.00 Aligned_cols=274 Identities=13% Similarity=0.035 Sum_probs=190.5
Q ss_pred HHHHHHHHHHhCCCCCcE--EEeCCHHHHHHHHHHHhc--CCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCH
Q 014492 132 RRLRAALAKDSGLESDHI--LVGCGADELIDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNV 207 (423)
Q Consensus 132 ~~lr~~ia~~~g~~~~~i--~~t~G~~~al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~ 207 (423)
.++++.+++++|.+++++ ++|+|+|+++..++.... .++..|+++.-.|.+....++..|.+++.||.+.++.+|+
T Consensus 69 ~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv~kaa~~lg~~~~~V~~d~~g~id~ 148 (374)
T PLN03032 69 VGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMEAVKVPTLPSGEIDY 148 (374)
T ss_pred HHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEeCCCceeHHHHHHHHcCCCCeEeeeCCCCcCcH
Confidence 468888889999988876 999999999988877543 2456788888999999999999999999999888889999
Q ss_pred HHHHHHhhcC--CceEEEEcCCCCCcCcCCCHHHHHHHHcC-C-----CEEEEccCCccccC--CC--chhhhhccCCcE
Q 014492 208 ELIADAVERE--KPKCIFLTSPNNPDGSIINDEDLLKILEM-P-----ILVVLDEAYTEFSG--LE--SRMEWVKKHDNL 275 (423)
Q Consensus 208 ~~l~~~i~~~--~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~-----~~li~Deay~~~~~--~~--~~~~~~~~~~~~ 275 (423)
++|++++.+. +|.+|+++..+|+||.+-|.+++.++++. | +++++|.+|..+.. .. ..... ..+-.
T Consensus 149 ~~L~~~i~~~~~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~--~~~vD 226 (374)
T PLN03032 149 DDLERALAKNRDKPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTF--RKPIG 226 (374)
T ss_pred HHHHHHHHHcCCCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccCC--CcCCc
Confidence 9999999742 57788888999999999999999999986 4 58999999975431 10 11111 11234
Q ss_pred EEEccChhhhcccCccccccccCHHHHHHHHHhcCC---------CCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHH
Q 014492 276 IVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP---------YNVSVAAEVAACAALQN--PIYLEKVKEALIKERE 344 (423)
Q Consensus 276 i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~---------~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~ 344 (423)
-+..|.+|.+| ....+|.++...+.++.+...... ++-+......+...|.. .+.+.++.++..++.+
T Consensus 227 Sis~s~HK~~g-~P~g~G~ll~r~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~ 305 (374)
T PLN03032 227 SVSVSGHKFLG-CPMPCGVALTRKKHVKALSQNVEYLNSRDATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAH 305 (374)
T ss_pred EEEECcccccC-CCcCeEEEEEEchhhHhhccCCcccCCCCCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 56778899655 455589888887766554321111 11233334444444443 3557788888889999
Q ss_pred HHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014492 345 RLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH 421 (423)
Q Consensus 345 ~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~ 421 (423)
++.+.|++.++.....+..+.+.++-| ..+. +. +|..+..- .+++||++....+.+.+.+.++.
T Consensus 306 ~l~~~l~~~~~~~~~~p~~~~V~f~~~---~~~~----~~-~~w~l~~~-----~~~~hi~vm~~~~~~~id~fi~d 369 (374)
T PLN03032 306 YLKDRLTEAGLTCRLNELSSTVVFERP---MDEA----FI-KKWQLACE-----GDIAHVVVMPNVTVEKLDEFVEE 369 (374)
T ss_pred HHHHHHHhCCCcEEECCCceEEEEcCC---CcHh----Hh-heeeeccc-----CCEEEEEECCCCCHHHHHHHHHH
Confidence 999999888765555556666766655 1121 22 34444432 35899998753333444444443
No 285
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.74 E-value=3.6e-15 Score=148.63 Aligned_cols=321 Identities=16% Similarity=0.162 Sum_probs=194.7
Q ss_pred CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCCC----C-CCCCcchHHHHHHHHHHhCCC-CCcEEEeCCHHHHHH
Q 014492 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP----Y-IYPDPESRRLRAALAKDSGLE-SDHILVGCGADELID 160 (423)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~----~-~Y~~~g~~~lr~~ia~~~g~~-~~~i~~t~G~~~al~ 160 (423)
..+++.+||+..+. ..++ .+|+|.+++.+ +... . .++.+...+|.+.|++.++-. .+.|+++++++++++
T Consensus 38 D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~v~f~~SGseA~e 117 (445)
T PRK08593 38 DVDGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHYTPAYMYHEPLVRLAKKLCELAPGDFEKRVTFGLSGSDAND 117 (445)
T ss_pred eCCCCEEEECCccHHhhcCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHH
Confidence 34578899997663 3344 46888888876 2211 1 134444567888888877533 258999999999999
Q ss_pred HHHHHhc--CCCCeEEEcCCCchhhHHHHH-HCC-------------CeEEEecCCCCCC-----CC-------HHHHHH
Q 014492 161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAA-VNG-------------AAVVKVPRKSDFS-----LN-------VELIAD 212 (423)
Q Consensus 161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~-~~g-------------~~~~~v~~~~~~~-----~d-------~~~l~~ 212 (423)
.+++... ....+|+....+|++....+- ..+ ..++.+|.++.+. .+ ++++++
T Consensus 118 ~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 197 (445)
T PRK08593 118 GIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKE 197 (445)
T ss_pred HHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHH
Confidence 9998432 123568888888875443222 111 1123344221110 11 244544
Q ss_pred Hhh----cCCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCchh--hhhccCCcEEEEccC
Q 014492 213 AVE----REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTF 281 (423)
Q Consensus 213 ~i~----~~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~i~S~ 281 (423)
.+. ..++.+|++...++..|.+.+ .+++.++|+. |+++|+||+|..|...+... ...+..+. +.++
T Consensus 198 ~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv~pD---i~t~ 274 (445)
T PRK08593 198 MFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNITPD---LMSF 274 (445)
T ss_pred HHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCCCCC---Eeee
Confidence 442 246888888888888898765 4555666665 99999999998775433221 12222223 3368
Q ss_pred hhhhcccCccccccccCHHHHHHHHHhc--CCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHc----cCCC
Q 014492 282 SKRAGLAGLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLK----DVPF 355 (423)
Q Consensus 282 SK~~g~~G~R~G~i~~~~~~~~~l~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~----~~~~ 355 (423)
+|.++ .|+++|++++++++++.+.... ..++.+++++.++.+.|+.-+- +...++.+++.+++.+.|+ +.+.
T Consensus 275 gK~l~-~G~p~gav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~-~~l~~~~~~~g~~l~~~L~~l~~~~~~ 352 (445)
T PRK08593 275 GKSLA-GGMPMSAIVGRKEIMESLEAPAHLFTTGANPVSCAAALATIDMIED-ESLLQRSAEKGEYARKRFDQWVSKYNF 352 (445)
T ss_pred ccccc-CCcccEEEEEcHHHHhhhccCCCCCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 99998 7899999999999988775322 2456788888888777753110 1233344444444444443 3554
Q ss_pred CeecCCCceEEEEEeCCC--------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC---hhhHHHHHHHHh
Q 014492 356 LNPYPSYSNFILCEVTSG--------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK---PEHTDALMECLM 420 (423)
Q Consensus 356 ~~~~p~~~~~~~~~~~~~--------~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~---~~~~~~l~~al~ 420 (423)
+.-..+.|.++.+.+... .....+...|.++||++.+.. .+.+|+++.. .++.+++.++++
T Consensus 353 v~~vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~ 424 (445)
T PRK08593 353 VGDVRGYGLSIGIDIVSDKKLKTRDNEAALKICNYCFEHGVVIIAVA----GNVLRFQPPLVITYEQLDTALNTIE 424 (445)
T ss_pred EEEEeccceEEEEEEecCCCcCCCcHHHHHHHHHHHHHCCeEEeccC----CCEEEEECCCccCHHHHHHHHHHHH
Confidence 433456677766666311 113567788889999997642 3689998763 444444444443
No 286
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.74 E-value=3.3e-15 Score=148.39 Aligned_cols=326 Identities=16% Similarity=0.156 Sum_probs=194.7
Q ss_pred CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CC-CCC----CCCCcchHHHHHHHHHHhCCC--CC-cEEE-eCCHHH
Q 014492 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LK-FPY----IYPDPESRRLRAALAKDSGLE--SD-HILV-GCGADE 157 (423)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~-~~~----~Y~~~g~~~lr~~ia~~~g~~--~~-~i~~-t~G~~~ 157 (423)
+.+++.+||+..+. ..++ .+|++.+++.+ +. ..+ .+..+...+|-+.+++.+..+ .+ .+++ ++++++
T Consensus 35 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGse 114 (425)
T PRK09264 35 DEDGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGITHGLDMHTTAKREFLETFEETILKPRGLDYKVQFTGPTGTN 114 (425)
T ss_pred eCCCCEeeecccchhhccCCCCCHHHHHHHHHHHHhcccccccccCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCCHHH
Confidence 35678899997763 3344 46888888876 22 111 122333456667777654211 22 5656 589999
Q ss_pred HHHHHHHHhc--CCCCeEEEcCCCchhhHHHHHHC----------CC---eEEEecCCCCC---CCCHHHHHHHhhc---
Q 014492 158 LIDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAVN----------GA---AVVKVPRKSDF---SLNVELIADAVER--- 216 (423)
Q Consensus 158 al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~----------g~---~~~~v~~~~~~---~~d~~~l~~~i~~--- 216 (423)
|++.+++... ....+|+....+|++....+-.. +. .+..+|.+..+ .-|++++++.+.+
T Consensus 115 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~ 194 (425)
T PRK09264 115 AVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSS 194 (425)
T ss_pred HHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccC
Confidence 9999988432 22367888888887554332211 11 23444432111 1267888888753
Q ss_pred --CCceEEEEcCCCCCcCcC-CCHHHHHHHH---cC-CCEEEEccCCccccCCCchh--hhhccCCcEEEEccChhhhcc
Q 014492 217 --EKPKCIFLTSPNNPDGSI-INDEDLLKIL---EM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGL 287 (423)
Q Consensus 217 --~~~~~i~l~~p~NPtG~~-~~~~~l~~i~---~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~i~S~SK~~g~ 287 (423)
+++.+|++.......|.+ .+.+.+++|. +. |+++|+||+|..|...+... ...+..+.+ .+++|.++.
T Consensus 195 ~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~~~~~v~PDi---~t~~K~l~~ 271 (425)
T PRK09264 195 GVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSFERAGITPDI---VTLSKSISG 271 (425)
T ss_pred CCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHHHHhhcCCCCCE---EEeccccCC
Confidence 246788888777777874 5565555554 44 99999999998775433221 111222332 366899985
Q ss_pred cCccccccccCHHHHHHHHH--hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc----CCCC-eecC
Q 014492 288 AGLRVGYGAFPLSIIEYLWR--AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKD----VPFL-NPYP 360 (423)
Q Consensus 288 ~G~R~G~i~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~-~~~p 360 (423)
.|+++|++++++++ ..+.. ....|+.++++..++.++++....-....++++++.+++.+.|++ .+.+ ...+
T Consensus 272 ~G~pigav~~~~~i-~~~~~~~~~~T~~gnp~~~aaa~a~l~~~~~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vr 350 (425)
T PRK09264 272 YGLPMALVLIKPEL-DVWKPGEHNGTFRGNNLAFVTATAALEEYWSDDAFEKEVKAKGELVRERLEEIAAKYPGLGAEVR 350 (425)
T ss_pred CccceEEEEEchhh-hccCCCccCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhCCCceecce
Confidence 59999999999886 33322 122366777777777666632100113455555555555555543 3322 2234
Q ss_pred CCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 361 SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
+.|.++++.+++......+.+.+.++||.+.+.+.. ...||+++....+.+++.+++++|
T Consensus 351 g~Gl~~~i~l~~~~~~~~l~~~~~~~Gv~~~~~~~~--~~~lr~~p~l~~t~~ei~~~~~~l 410 (425)
T PRK09264 351 GRGMMQGIDFGDGELAGKIAAEAFENGLIIETSGPE--DEVVKLLPPLTIDEEELEEGLDIL 410 (425)
T ss_pred ecccEEEEEecChHHHHHHHHHHHHCCCEEeccCCC--CCEEEEeCCCCCCHHHHHHHHHHH
Confidence 568888999975445678888899999999875422 367888865322234555555443
No 287
>PRK06541 hypothetical protein; Provisional
Probab=99.74 E-value=4.6e-15 Score=148.25 Aligned_cols=323 Identities=17% Similarity=0.185 Sum_probs=200.7
Q ss_pred CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhcC-CCC-----CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQL-KFP-----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (423)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~~-~~~-----~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~ 161 (423)
..+++.+||+..+. ..++ .+|++.+|+.+. ... ..|+.+...++-+.+++..+-..+.++++++++++++.
T Consensus 48 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseAve~ 127 (460)
T PRK06541 48 DDRGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAFFPLWSYAHPPAIELAERLAALAPGDLNRVFFTTGGSEAVES 127 (460)
T ss_pred eCCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhCcCccccccCCHHHHHHHHHHHHhCCCCcCEEEEcCCcHHHHHH
Confidence 34578899997762 3344 368888888762 211 12344445567777777764334689999999999999
Q ss_pred HHHHhcC-------C-CCeEEEcCCCchhhHHHHHH-CC------------CeEEEecCCCC-----CCCC--------H
Q 014492 162 IMRCVLD-------P-GDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKSD-----FSLN--------V 207 (423)
Q Consensus 162 ~~~~l~~-------~-gd~Vl~~~p~y~~~~~~~~~-~g------------~~~~~v~~~~~-----~~~d--------~ 207 (423)
+++.... + ..+|+...-+|++....+.. .| ..+..+|.++. +.-+ +
T Consensus 128 AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (460)
T PRK06541 128 AWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAA 207 (460)
T ss_pred HHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHH
Confidence 9884321 1 36788888888754433221 11 11233332211 1122 3
Q ss_pred HHHHHHhhc---CCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEE
Q 014492 208 ELIADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIV 277 (423)
Q Consensus 208 ~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~ 277 (423)
+.+++.+.+ .++.+|++...+++.|.+.+ .+++.++|+. |+++|+||+|..|...+.. ....+..+.++
T Consensus 208 ~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDiv- 286 (460)
T PRK06541 208 DRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPDII- 286 (460)
T ss_pred HHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCCCCCEE-
Confidence 667777752 34556666565899999988 6667777776 9999999999777432222 11122223333
Q ss_pred EccChhhhcccCc-cccccccCHHHHHHHHHhc------CCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHH
Q 014492 278 LRTFSKRAGLAGL-RVGYGAFPLSIIEYLWRAK------QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLL 350 (423)
Q Consensus 278 i~S~SK~~g~~G~-R~G~i~~~~~~~~~l~~~~------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L 350 (423)
+++|.++ .|+ ++|++++++++++.+.... ..++.++++.+++.+.|+.-+ -+...++++++.+++.+.|
T Consensus 287 --t~gK~l~-~G~~pigav~~~~~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~l~-~~~~~~~~~~~g~~l~~~L 362 (460)
T PRK06541 287 --TCAKGIT-SGYSPLGAMIASDRLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLDIFE-REGLLDHVRDNEPAFRATL 362 (460)
T ss_pred --Eeccccc-CCccceeEEEEcHHHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHH
Confidence 4899998 887 9999999999988775321 245678888888877775311 1245567777777777777
Q ss_pred ccC---CCCeecCCCceEEEEEeCCC------CC-------H-HHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---Chh
Q 014492 351 KDV---PFLNPYPSYSNFILCEVTSG------MD-------A-KKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPE 410 (423)
Q Consensus 351 ~~~---~~~~~~p~~~~~~~~~~~~~------~~-------~-~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~ 410 (423)
+++ +.+....+.|.++.+++.+. .+ . ..+.+.|.++||++.+.. .+.+.+||+.. +.+
T Consensus 363 ~~l~~~~~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~--~g~~~lrl~Ppl~~t~~ 440 (460)
T PRK06541 363 EKLLDLPIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYCRADD--RGDPVVQLAPPLISGQE 440 (460)
T ss_pred HHhhcCCCeEEEEecceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHHhCCeEEEecC--CCCCEEEEECCCCCCHH
Confidence 665 32222446677777776321 00 0 246677889999998732 12468999976 344
Q ss_pred hHHHHHHHHh
Q 014492 411 HTDALMECLM 420 (423)
Q Consensus 411 ~~~~l~~al~ 420 (423)
+.+++.++++
T Consensus 441 ~id~~~~~l~ 450 (460)
T PRK06541 441 EFDEIEQILR 450 (460)
T ss_pred HHHHHHHHHH
Confidence 4444444443
No 288
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.73 E-value=9.4e-15 Score=141.76 Aligned_cols=312 Identities=13% Similarity=0.125 Sum_probs=200.6
Q ss_pred eeEcCCCCCCCCCCHHHHHH-HhcCCCC-CCC-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeE
Q 014492 97 IVKIDANENPYGPPPEVREA-LGQLKFP-YIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKI 173 (423)
Q Consensus 97 ~i~l~~~~~~~~~~~~v~~a-l~~~~~~-~~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~V 173 (423)
+|||-+ +.++ +.+.++ +..+..+ ..| +++...+|++++++++|. +.++.+++++.+++++....++|||.|
T Consensus 40 ~iDLlt---DsgT-~aMs~~q~a~~~~GDe~yag~~s~~~lE~~va~~~G~--~~av~v~sGT~Al~ll~~l~l~pGDeV 113 (450)
T TIGR02618 40 YIDLLT---DSGT-NAMSDKQWAGLMMGDEAYAGSRNFYHLERTVRELYGF--KYVVPTHQGRGAENLLSQIAIKPGDYV 113 (450)
T ss_pred EEEccc---CCCc-HHHHHHHHHHhhhcchhhcCCCcHHHHHHHHHHHHCC--CeEEEcCCHHHHHHHHHHhCCCCcCEE
Confidence 466643 2222 555555 5554322 347 677889999999999996 469999999999998887778999977
Q ss_pred EEcCCCch-hhHHHHHHCCCeEEEecC----------CCCCCCCHHHHHHHhhcC---CceEEEEcCCCCCc-CcCCCHH
Q 014492 174 VDCPPTFT-MYEFDAAVNGAAVVKVPR----------KSDFSLNVELIADAVERE---KPKCIFLTSPNNPD-GSIINDE 238 (423)
Q Consensus 174 l~~~p~y~-~~~~~~~~~g~~~~~v~~----------~~~~~~d~~~l~~~i~~~---~~~~i~l~~p~NPt-G~~~~~~ 238 (423)
++++|. .........|+..+.++. +.++.+|++++++.+++. ++++|.+.+++|-. |.++|.+
T Consensus 114 --psn~~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~ 191 (450)
T TIGR02618 114 --PGNMYFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMA 191 (450)
T ss_pred --CCceeHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHH
Confidence 667774 444446778988777743 235788999999999742 45577888888854 8998875
Q ss_pred HHHH---HHcC-CCEEEEccCCcc----cc------CCCchh----hhhccCCcEEEEccChhhhccc-Cccccccc-cC
Q 014492 239 DLLK---ILEM-PILVVLDEAYTE----FS------GLESRM----EWVKKHDNLIVLRTFSKRAGLA-GLRVGYGA-FP 298 (423)
Q Consensus 239 ~l~~---i~~~-~~~li~Deay~~----~~------~~~~~~----~~~~~~~~~i~i~S~SK~~g~~-G~R~G~i~-~~ 298 (423)
++++ +|+. |+.||+|.++.. |. +.+..+ .....+. ..++.|..|.++.+ | |+++ .+
T Consensus 192 ~l~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~a-D~~~~S~~Kd~~~~~G---G~l~~~d 267 (450)
T TIGR02618 192 NMREVRELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYA-DGCTMSGKKDCLVNIG---GFLCMND 267 (450)
T ss_pred HHHHHHHHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccC-cEEEEeeccCCCCCCc---eEEEeCC
Confidence 5555 5554 999999999864 11 111111 1111122 24777888987665 5 6666 47
Q ss_pred HHHHHHHHHhcCCC-------CCcHHHHHHHHHHhCChHHHH-HHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEe
Q 014492 299 LSIIEYLWRAKQPY-------NVSVAAEVAACAALQNPIYLE-KVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEV 370 (423)
Q Consensus 299 ~~~~~~l~~~~~~~-------~~~~~~~~a~~~~l~~~~~~~-~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~ 370 (423)
+++++++++....+ .++.-...++..+|.+ .++ ...++-..+.++|.+.|.+.+.-.+.|.+|+.++++.
T Consensus 268 ~~l~~k~r~~~~~~eG~~tyGgla~r~~~ala~gL~e--~~~~~y~~~r~~~a~~La~~L~~~Gvpv~~p~ggh~V~vda 345 (450)
T TIGR02618 268 DEMFQSAKELVVVFEGMPSYGGLAGRDMEAMAIGIRE--AVDYEYIEHRVKQVRYLGDKLKAAGVPIVEPVGGHAVFLDA 345 (450)
T ss_pred HHHHHHHHHHhhhcCCccccCchhhhhHHHHHHHHHH--hhhHHHHHHHHHHHHHHHHHHHHCCCcccCCCCcceEEEEh
Confidence 88888888764332 2233333344444432 222 2222233356778888887753335788899898865
Q ss_pred CC--------CCCHHHHHHHHH-hCCcEEEe-CCC-----C-------CCCCeEEEEec----ChhhHHHHHHHHhhh
Q 014492 371 TS--------GMDAKKLKDDLA-KMGVMIRH-YNN-----K-------ELKGYVRVSVG----KPEHTDALMECLMHL 422 (423)
Q Consensus 371 ~~--------~~~~~~l~~~L~-~~gI~v~~-~~~-----~-------~~~~~iRis~~----~~~~~~~l~~al~~l 422 (423)
.. ...+..+...|- +.||--.. |+. + ..-..+|+++. +..+++.+.+++..+
T Consensus 346 ~~~lph~~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~ 423 (450)
T TIGR02618 346 RRFLPHIPQDQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKL 423 (450)
T ss_pred HHhCCCCChhhChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHH
Confidence 31 335777877775 78876542 111 0 01257999975 456678888887765
No 289
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.73 E-value=3e-15 Score=147.05 Aligned_cols=256 Identities=15% Similarity=0.013 Sum_probs=178.4
Q ss_pred HHHHHHHHHHhCCCC-CcEEEeCCHH-HHHHHHHHHhcC---CCCeEEEcCCCchhhHHHHHHCCCeEEEecC---CCCC
Q 014492 132 RRLRAALAKDSGLES-DHILVGCGAD-ELIDLIMRCVLD---PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR---KSDF 203 (423)
Q Consensus 132 ~~lr~~ia~~~g~~~-~~i~~t~G~~-~al~~~~~~l~~---~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~---~~~~ 203 (423)
.++++.+++++|++. +..++++|++ .++.+++.++-. +||.|+++.-+|......+...|++++.++. ++++
T Consensus 108 ~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~~d~~~~ 187 (444)
T TIGR03531 108 NKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIETVLDGDEL 187 (444)
T ss_pred HHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeeeeecCcCC
Confidence 478888888899852 4577888888 577777776542 5899999999999999999999999999994 4678
Q ss_pred CCCHHHHHHHhhcC--CceEEEEcCCC-CCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchh--hhhccCCcEEE
Q 014492 204 SLNVELIADAVERE--KPKCIFLTSPN-NPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIV 277 (423)
Q Consensus 204 ~~d~~~l~~~i~~~--~~~~i~l~~p~-NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~ 277 (423)
.+|++++++++++. +..++++++|+ +++|..-+.++|.++|+. |+++|+|++|+......... .......-.++
T Consensus 188 ~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~~~~~~~g~~~Grad~v 267 (444)
T TIGR03531 188 TTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNKYMELINKAIKVGRVDAV 267 (444)
T ss_pred CcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChhhhhhhhccccccCCCeE
Confidence 99999999999731 55677776664 566678889999999987 99999999998533110000 11111122577
Q ss_pred EccChhhhcccCcccccccc-CHHHHHHHHHhcCCCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCC-
Q 014492 278 LRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQPYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVP- 354 (423)
Q Consensus 278 i~S~SK~~g~~G~R~G~i~~-~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~- 354 (423)
+.|++|.+.++|. .|.++. ++++++.+.........+.+.+.+...++.. .++++++.++..++++++.+.|+++.
T Consensus 268 v~s~hK~l~~pg~-Gg~I~~~d~el~~~i~~~y~g~~~~s~~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l~~ 346 (444)
T TIGR03531 268 VSSTDKNFMVPVG-GAIIYSFDENFIQEISKSYPGRASASPSLDVLITLLSLGSKGYLELLKERKEMYKYLKELLQKLAE 346 (444)
T ss_pred EEeCccCCCCCCC-EEEEEECCHHHHHHHHHhccCCCCChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999987776 344446 7788887776533333445666666666654 46788899999999999999987652
Q ss_pred --CCeecCCCceEEE--EEeC--CCCCHHHHHHHHHhCCc
Q 014492 355 --FLNPYPSYSNFIL--CEVT--SGMDAKKLKDDLAKMGV 388 (423)
Q Consensus 355 --~~~~~p~~~~~~~--~~~~--~~~~~~~l~~~L~~~gI 388 (423)
+..+.....|-+. +.+. .+.+...+-..|..++|
T Consensus 347 ~~~~~~~~~~~n~is~~~~~~~~~~~~~~~~g~~l~~~~v 386 (444)
T TIGR03531 347 RHGERLLDTPENPISSAMTLSTLKGKDPTMLGSMLYSRRV 386 (444)
T ss_pred hhCcEeecCCCCceeEEEecccccccCHHHHHHHHHhCCC
Confidence 1233333233222 2221 24467777787876666
No 290
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.72 E-value=6.1e-16 Score=148.83 Aligned_cols=303 Identities=18% Similarity=0.151 Sum_probs=183.3
Q ss_pred CeeEcCCCCCCCCCCHHHHHHHhcC---CCCCCCC------Ccc-hHH----HHHHHHHHhCCCCC----cEEEeCCHHH
Q 014492 96 DIVKIDANENPYGPPPEVREALGQL---KFPYIYP------DPE-SRR----LRAALAKDSGLESD----HILVGCGADE 157 (423)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~---~~~~~Y~------~~g-~~~----lr~~ia~~~g~~~~----~i~~t~G~~~ 157 (423)
+-|.|-..||.. +|.+++++... .+..+|| ... ..+ .++.+.+.|+.+++ +|-.-+|+ .
T Consensus 21 ~~l~LiaSEN~~--Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~~~~w~anvqp~SGs-~ 97 (399)
T PF00464_consen 21 STLNLIASENYM--SPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAEPKEWYANVQPHSGS-Q 97 (399)
T ss_dssp HSEE-CTT-------HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-STTTEEEE---SSHH-H
T ss_pred cCccccCccccc--CHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCCcccceEEeecCCch-H
Confidence 348888888866 58888888762 2222333 211 122 44555667898844 55555555 5
Q ss_pred HHHHHHHHhcCCCCeEEEcCCCchhhHH---HH-------HHCCCeEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEcC
Q 014492 158 LIDLIMRCVLDPGDKIVDCPPTFTMYEF---DA-------AVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTS 226 (423)
Q Consensus 158 al~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~-------~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~ 226 (423)
|...++.+|++|||+|+..++.+.++.. .. .....+.+.++.+ +++.+|.+++++.+.+.+||+|++..
T Consensus 98 An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPklIi~G~ 177 (399)
T PF00464_consen 98 ANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKEHKPKLIICGA 177 (399)
T ss_dssp HHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH--SEEEEE-
T ss_pred HHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhhcCCCEEEECc
Confidence 7788888899999999988877643321 11 1123467777765 67899999999999888999999864
Q ss_pred CCCCcCcCCCHHHHHHHHcC-CCEEEEccCCcccc-CCCchhhhhccCCcEEEEccChhhhcccCccccccccC------
Q 014492 227 PNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP------ 298 (423)
Q Consensus 227 p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~-~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~------ 298 (423)
-+.| ..++.+++++||+. |.+|+.|-+|.... -++.....+ .+ ..++.+|.+|+| +|-|-|.|+.+
T Consensus 178 S~y~--~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~-~~-ADvvt~sThKtl--~GPrggiI~~~~~~~~~ 251 (399)
T PF00464_consen 178 SSYP--RPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPF-PY-ADVVTGSTHKTL--RGPRGGIILTNKGSKNV 251 (399)
T ss_dssp SSTS--S---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GC-CT-SSEEEEESSGGG---SSS-EEEEES-SEEEE
T ss_pred hhcc--CccCHHHHHHHHHhcCcEEEecccccccceehheecCcc-cc-ceEEEeeccccc--cccCceEEEEcCCcccc
Confidence 4443 66889999999997 99999999996422 122111122 12 238889999986 78899999999
Q ss_pred --------HHHHHHHHHhcCCCCC---cHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeec-CCCce
Q 014492 299 --------LSIIEYLWRAKQPYNV---SVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPY-PSYSN 364 (423)
Q Consensus 299 --------~~~~~~l~~~~~~~~~---~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~~~~ 364 (423)
+++.+++.+...+... ..-..++...+|.. ....++..+++.++.+.|.+.|.+.++-.+. .....
T Consensus 252 ~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~~G~~v~~ggTd~H 331 (399)
T PF00464_consen 252 DKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQERGFKVVTGGTDNH 331 (399)
T ss_dssp -TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTT-EEGGGS-SSS
T ss_pred CCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhhCCcEEEECCCCCC
Confidence 8889999887766432 22222222233322 2235788888999999999999998754332 23446
Q ss_pred EEEEEeCC-CCCHHHHHHHHHhCCcEEEe----CCC-CCCCCeEEEEec
Q 014492 365 FILCEVTS-GMDAKKLKDDLAKMGVMIRH----YNN-KELKGYVRVSVG 407 (423)
Q Consensus 365 ~~~~~~~~-~~~~~~l~~~L~~~gI~v~~----~~~-~~~~~~iRis~~ 407 (423)
.+++++.. +.+..+..+.|.+.||.+.. ++. +.....|||+..
T Consensus 332 ~vlvd~~~~~~~g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGlRlGT~ 380 (399)
T PF00464_consen 332 QVLVDLRSFGIDGKEAEKALEEAGIIVNKNTIPGDRSPFVPSGLRLGTP 380 (399)
T ss_dssp EEEEEGGGGTS-HHHHHHHHHHTTEE-EEE--TTTSTTTT-SEEEEESH
T ss_pred eEEEEecccccchHHHHHHHHhcCeeecccccCCCCCCCCCCEEEECCH
Confidence 67889853 67888888999999999974 332 223568999863
No 291
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.72 E-value=7.8e-15 Score=146.03 Aligned_cols=320 Identities=18% Similarity=0.163 Sum_probs=198.9
Q ss_pred CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCCC-----CCCCCcchHHHHHHHHHHhCCC-CCcEEEeCCHHHHHH
Q 014492 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP-----YIYPDPESRRLRAALAKDSGLE-SDHILVGCGADELID 160 (423)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~-----~~Y~~~g~~~lr~~ia~~~g~~-~~~i~~t~G~~~al~ 160 (423)
..+++.++|+..+. ..++ .+|++.+++.+ +... ..|+.+...+|-+.|++..+-. .+.++++++++++++
T Consensus 50 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~e 129 (441)
T PRK05769 50 DVDGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLHYSLTDFYYEPAVELAERLVEIAPGGFEKKVFFTNSGTESNE 129 (441)
T ss_pred eCCCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccCccCcccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHH
Confidence 35678899997773 3344 36888888876 2211 1233444566777777776422 368999999999999
Q ss_pred HHHHHhc--CCCCeEEEcCCCchhhHHHHHH-CCC-------------eEEEecCCCCCC-----C--------CHHHHH
Q 014492 161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKSDFS-----L--------NVELIA 211 (423)
Q Consensus 161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g~-------------~~~~v~~~~~~~-----~--------d~~~l~ 211 (423)
.+++... ...++|+...-+|++....+-. .|. .+..+|.++.+. - +++.++
T Consensus 130 ~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le 209 (441)
T PRK05769 130 AAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIE 209 (441)
T ss_pred HHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHH
Confidence 9988432 2236788888888755533322 111 123333221111 1 123455
Q ss_pred H-Hhh----cCCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEEEc
Q 014492 212 D-AVE----REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLR 279 (423)
Q Consensus 212 ~-~i~----~~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~ 279 (423)
+ .++ ..++.+|++...+...|.+.+ .+++.++|+. |+++|+||++..|...+.. ....+..+.++
T Consensus 210 ~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv~pDiv--- 286 (441)
T PRK05769 210 DYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGVEPDII--- 286 (441)
T ss_pred HHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccceehhhccCCCCCEE---
Confidence 5 222 246788888877777899888 7777788876 9999999999976543321 11222223333
Q ss_pred cChhhhcccCccccccccCHHHHHHHHH-hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc----CC
Q 014492 280 TFSKRAGLAGLRVGYGAFPLSIIEYLWR-AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKD----VP 354 (423)
Q Consensus 280 S~SK~~g~~G~R~G~i~~~~~~~~~l~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~ 354 (423)
+++|.++ .|+++|++++++++.+.... ....|+.+++++.++.++|+.-+- ...++.+++-++|.+.|++ .+
T Consensus 287 t~~K~l~-~G~p~gav~~~~~i~~~~~~~~~~T~~g~p~~~aaa~a~L~~l~~--~~~~~~~~~g~~l~~~L~~l~~~~~ 363 (441)
T PRK05769 287 TLAKAIA-GGLPLGAVIGRAELMFLPPGSHANTFGGNPVAAAAALATLEELEE--GLLENAQKLGEYLRKELKELKEKYE 363 (441)
T ss_pred EEccccc-CCcccEEEEEehhhhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 4789998 78999999999888753321 123466788888888888864322 4555666666666666654 44
Q ss_pred CCeecCCCceEEEEEeCCC------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014492 355 FLNPYPSYSNFILCEVTSG------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM 420 (423)
Q Consensus 355 ~~~~~p~~~~~~~~~~~~~------~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~ 420 (423)
.+.-....|.++.+.+.+. .....+.+.+.++||++.+.+ .+.+|++.. +.++++++.++++
T Consensus 364 ~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Gil~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~ 434 (441)
T PRK05769 364 FIGDVRGLGLMIGVELVKDRKEPDPKLRDKVLYEAFKRGLLLLGAG----KSAIRIIPPLIITEEEADIGLEILE 434 (441)
T ss_pred CeeeeecceEEEEEEeccCCccccHHHHHHHHHHHHhCCcEEecCC----CCEEEEeCCCCCCHHHHHHHHHHHH
Confidence 3333345677777777421 123457777889999997643 368999976 3444554444443
No 292
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.71 E-value=9.7e-15 Score=147.02 Aligned_cols=320 Identities=15% Similarity=0.167 Sum_probs=196.7
Q ss_pred CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCC-C--CC---CCCcchHHHHHHHHHHh-CCCCCcEEEeCCHHHHH
Q 014492 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF-P--YI---YPDPESRRLRAALAKDS-GLESDHILVGCGADELI 159 (423)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~-~--~~---Y~~~g~~~lr~~ia~~~-g~~~~~i~~t~G~~~al 159 (423)
+.+++.+||+..+. ..++ .+|+|.+|+.+ +.. . +. ++.....+|.+.|.+.+ +.+.+.+++++++++|+
T Consensus 85 D~dG~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~~~~v~f~~SGsEA~ 164 (504)
T PLN02760 85 DINGKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPFYHSFWNRTTKPSLDLAKELLEMFTARKMGKVFFTNSGSEAN 164 (504)
T ss_pred ECCCCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhccceecccccCcHHHHHHHHHHHhhcCCCCCCEEEEeCChHHHH
Confidence 35678899998752 3343 46888888876 321 1 11 12223456777777764 33346799999999999
Q ss_pred HHHHHHhc------C-CC-CeEEEcCCCchhhHHHH-HHCCCe------------EEEecCCCCCC-------------C
Q 014492 160 DLIMRCVL------D-PG-DKIVDCPPTFTMYEFDA-AVNGAA------------VVKVPRKSDFS-------------L 205 (423)
Q Consensus 160 ~~~~~~l~------~-~g-d~Vl~~~p~y~~~~~~~-~~~g~~------------~~~v~~~~~~~-------------~ 205 (423)
+.+++... . ++ .+|+...-.|+.....+ ...|.. +..++.+..+. .
T Consensus 165 e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 244 (504)
T PLN02760 165 DTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTR 244 (504)
T ss_pred HHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHH
Confidence 99998552 1 23 57888888887554332 222221 11222111111 0
Q ss_pred CHHHHHHHhhc---CCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCchh--hhhccCCcE
Q 014492 206 NVELIADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNL 275 (423)
Q Consensus 206 d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~ 275 (423)
..+++++.+.+ .++.+|++...+...|.+.+ .+++.+||+. |+++|+||++..|...+... ...+..+.
T Consensus 245 ~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv~PD- 323 (504)
T PLN02760 245 LADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKYNIKPD- 323 (504)
T ss_pred HHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhHHHhcCCCCc-
Confidence 12446666531 35778888877777898888 7888888887 99999999998775333221 11111222
Q ss_pred EEEccChhhhcccC-ccccccccCHHHHHHHHHh---------cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 014492 276 IVLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA---------KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERER 345 (423)
Q Consensus 276 i~i~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~~---------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 345 (423)
+.+++|.+| .| +.+|.+++++++.+.+... ...|+.++++.+++.+.|+.-+ -+...++.+++-++
T Consensus 324 --ivtlgK~lg-gG~~PigAv~~~~~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i~-~~~l~~~~~~~g~~ 399 (504)
T PLN02760 324 --LVSLAKALS-SAYMPIGAVLVSPEISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIYK-ERNIPEHVNKIAPR 399 (504)
T ss_pred --EEEeccccc-CCccccceEeecHHHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHHH-hCCHHHHHHHHHHH
Confidence 456799987 56 5899999999998877531 2346778998888888876421 11334455555555
Q ss_pred HHHHHcc---CCCCeecCCCceEEEEEeCCCCC-----------HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---C
Q 014492 346 LFKLLKD---VPFLNPYPSYSNFILCEVTSGMD-----------AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---K 408 (423)
Q Consensus 346 l~~~L~~---~~~~~~~p~~~~~~~~~~~~~~~-----------~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~ 408 (423)
|.+.|++ .+.+.-..+.|.++.+++.+... ...+.+.+.++||++.+.+ +.+||+.. +
T Consensus 400 l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g-----~~lrl~Ppl~it 474 (504)
T PLN02760 400 FQDGIKAFSGSPIIGEIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRVAG-----DNIMMSPPLIIT 474 (504)
T ss_pred HHHHHHHHhcCCCeeeEEeCceEEEEEEecCCcccccccchhHHHHHHHHHHHhCCcEEEecC-----CEEEEECCCCCC
Confidence 5555544 34332234567777777742111 4457788889999998743 46899965 4
Q ss_pred hhhHHHHHHHHh
Q 014492 409 PEHTDALMECLM 420 (423)
Q Consensus 409 ~~~~~~l~~al~ 420 (423)
.++++++.++++
T Consensus 475 ~eeid~~~~~l~ 486 (504)
T PLN02760 475 PEEVDELISIYG 486 (504)
T ss_pred HHHHHHHHHHHH
Confidence 445555555543
No 293
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.71 E-value=5.8e-15 Score=137.43 Aligned_cols=317 Identities=17% Similarity=0.163 Sum_probs=211.7
Q ss_pred CeeEcCCCCCCCCCCHHHHHHHhcC---CCCCCCC------Ccch-H----HHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492 96 DIVKIDANENPYGPPPEVREALGQL---KFPYIYP------DPES-R----RLRAALAKDSGLESDHILVGCGADELIDL 161 (423)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~---~~~~~Y~------~~g~-~----~lr~~ia~~~g~~~~~i~~t~G~~~al~~ 161 (423)
+-|.|=..||-. ++.|.+|+... .+..+|| ...+ . -..+...+.||.+..+|...+|++ |...
T Consensus 27 ~~ieLIASEN~~--S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~~anVQPhSGs~-AN~a 103 (413)
T COG0112 27 EHIELIASENFT--SPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEYANVQPHSGSQ-ANQA 103 (413)
T ss_pred hceeeeeccccC--CHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCCCccccCCCCchH-HHHH
Confidence 458888888865 58888888752 2323333 2221 2 234555567899888999999987 5556
Q ss_pred HHHHhcCCCCeEEEcCCCchhhHHHH---HHCC--CeEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCC
Q 014492 162 IMRCVLDPGDKIVDCPPTFTMYEFDA---AVNG--AAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII 235 (423)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~g--~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~ 235 (423)
++.++++|||+|+-.+-.+.++.... ...| .+++.++.+ ++..+|.|++++.+.+.+||+|+.-.-.. -..+
T Consensus 104 v~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et~~IDyD~~~k~a~e~kPK~ii~G~SaY--~r~i 181 (413)
T COG0112 104 VYLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPETGLIDYDEVEKLAKEVKPKLIIAGGSAY--SRPI 181 (413)
T ss_pred HHHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEecccccccCccCHHHHHHHHHHhCCCEEEECcccc--cccc
Confidence 77779999999998777665433221 1123 356666665 56899999999999889999999743222 3678
Q ss_pred CHHHHHHHHcC-CCEEEEccCCccc-cCCCchhhhhccCCcEEEEccChhhhcccCccccccccCH-HHHHHHHHhcCCC
Q 014492 236 NDEDLLKILEM-PILVVLDEAYTEF-SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWRAKQPY 312 (423)
Q Consensus 236 ~~~~l~~i~~~-~~~li~Deay~~~-~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~-~~~~~l~~~~~~~ 312 (423)
+.+++++|++. |.+|++|-+|... .-++.....+. ...++.+|.+|+| +|-|-|.|+++. ++.+++.+...|.
T Consensus 182 d~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~--~AdvVTtTTHKTl--rGPrGG~Il~~~eel~kkin~aVFPg 257 (413)
T COG0112 182 DFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLP--HADVVTTTTHKTL--RGPRGGIILTNDEELAKKINSAVFPG 257 (413)
T ss_pred CHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCC--ccceEeCCcccCC--CCCCceEEEeccHHHHHHhhhhcCCc
Confidence 99999999998 9999999999642 22222111111 1348899999986 788999999985 8888888876664
Q ss_pred CCc-HHH--HHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCce-EEEEEeC-CCCCHHHHHHHHHh
Q 014492 313 NVS-VAA--EVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSN-FILCEVT-SGMDAKKLKDDLAK 385 (423)
Q Consensus 313 ~~~-~~~--~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~-~~~~~~~-~~~~~~~l~~~L~~ 385 (423)
..+ +.. .++-..++.. ..-+++..+++.+|.+.|.+.|.+.++-.+....-+ .+.+++. .+.+.+.....|.+
T Consensus 258 ~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~G~~vvsGgTdnHl~lVDl~~~~~~Gk~ae~~L~~ 337 (413)
T COG0112 258 LQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKERGFKVVSGGTDNHLVLVDLRSKGLTGKKAEAALER 337 (413)
T ss_pred cCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHcCCeEecCCccceEEEEEcccCCCCHHHHHHHHHH
Confidence 332 222 1111222221 122577888888999999999998775433322223 4556665 46678888888889
Q ss_pred CCcEEE----eCCC--CCCCCeEEEEec-------ChhhHHHHHHHHhh
Q 014492 386 MGVMIR----HYNN--KELKGYVRVSVG-------KPEHTDALMECLMH 421 (423)
Q Consensus 386 ~gI~v~----~~~~--~~~~~~iRis~~-------~~~~~~~l~~al~~ 421 (423)
.||.+. |++. +-.+..|||... .+.+.+++.+.|.+
T Consensus 338 ~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~ 386 (413)
T COG0112 338 AGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIAD 386 (413)
T ss_pred cCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHH
Confidence 999997 3443 344678999852 24456666555543
No 294
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.71 E-value=3e-16 Score=143.92 Aligned_cols=272 Identities=21% Similarity=0.232 Sum_probs=167.1
Q ss_pred hHHHHHHHHHHh---C---CCCCcEEEeCCHHHHHHHHHHHhcCC--C----CeEEEcCCCchhhHHHHHHCCCeEEEec
Q 014492 131 SRRLRAALAKDS---G---LESDHILVGCGADELIDLIMRCVLDP--G----DKIVDCPPTFTMYEFDAAVNGAAVVKVP 198 (423)
Q Consensus 131 ~~~lr~~ia~~~---g---~~~~~i~~t~G~~~al~~~~~~l~~~--g----d~Vl~~~p~y~~~~~~~~~~g~~~~~v~ 198 (423)
..+|++.|.+++ | .+...|++++|++++++.++.+|... . -.|+...|.|+.|......+.-......
T Consensus 45 s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w~ 124 (363)
T PF04864_consen 45 SPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYKWA 124 (363)
T ss_dssp -HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEEEE
T ss_pred cHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCcccc
Confidence 578999999887 3 24569999999999999999998533 1 3799999999999988765443333332
Q ss_pred CC-CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEE
Q 014492 199 RK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLI 276 (423)
Q Consensus 199 ~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i 276 (423)
-| ..|. + . ....+-+=++|+||||.|.+ .+.+++- +..+|.|-+|.+-.+.+ +.. ..+..|
T Consensus 125 Gda~~~~-~------~-~~~~~~IElVTSPNNPDG~l-----r~~V~~g~~~k~I~D~AYYWPhyTp--I~~--~aD~Di 187 (363)
T PF04864_consen 125 GDASNFK-N------S-DNPSPYIELVTSPNNPDGQL-----REAVLNGSSGKVIHDLAYYWPHYTP--ITA--PADHDI 187 (363)
T ss_dssp EECCCGT-T--------S-CCGEEEEEESS-TTT-----------SSTTTEEEEEEE-TT-STTTS-----S---B--SE
T ss_pred ccHHhhc-c------C-CCCCCeEEEEeCCCCCcccc-----cchhcCCCCcceeeeeeeecccccc--cCC--CCCCce
Confidence 11 1121 0 0 01244566778999999987 4445554 67789999998655533 222 234559
Q ss_pred EEccChhhhcccCccccccccC-HHHHHHHHHhcC--CCCCcHHHHHHHHHHhCC-----------hHHHHHHHHHHHHH
Q 014492 277 VLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQ--PYNVSVAAEVAACAALQN-----------PIYLEKVKEALIKE 342 (423)
Q Consensus 277 ~i~S~SK~~g~~G~R~G~i~~~-~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~-----------~~~~~~~~~~~~~~ 342 (423)
.+.|+||.-|-+|.|+||++.. +++.+++.++.. ..+++.=+|.-+...|+. .+..+--++.++++
T Consensus 188 MLFT~SK~TGHAGSR~GWAlVKD~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~~M~~R 267 (363)
T PF04864_consen 188 MLFTLSKLTGHAGSRFGWALVKDEEVAKKMTKYMELNTIGVSRDSQLRALKILKVVLDGYGTEKGTEDIFHFGYSTMRER 267 (363)
T ss_dssp EEEEHHHHCS-GGG-EEEEEES-HHHHHHHHHHHHHHCSS--HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHHHHHHH
T ss_pred EEEEEecccCccccccceeeecCHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHH
Confidence 9999999999999999999995 566777766543 356777777766666652 13566667888888
Q ss_pred HHHHHHHHccCCCCe--------------ecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC-CCCCeEEEEec
Q 014492 343 RERLFKLLKDVPFLN--------------PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK-ELKGYVRVSVG 407 (423)
Q Consensus 343 ~~~l~~~L~~~~~~~--------------~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~-~~~~~iRis~~ 407 (423)
-++|.+.++.-+... +......|.|++.... ..++..+.|++.||..+.|..+ ....++|||+-
T Consensus 268 W~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~e-ed~DC~~~l~~~~I~tr~G~~fga~~ryVRlSml 346 (363)
T PF04864_consen 268 WEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCERE-EDEDCYAVLREAKIITRSGVLFGADSRYVRLSML 346 (363)
T ss_dssp HHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSC-GGSSHHHHHHCTTEEEEEGGGGTS-TTEEEEESS
T ss_pred HHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCc-ccccHHHHHHhCCcccCCCCccCCCCCeEEEecc
Confidence 999999987643211 1223457999999732 2245566677999999998874 45789999986
Q ss_pred Ch-hhHHHHHHHHh
Q 014492 408 KP-EHTDALMECLM 420 (423)
Q Consensus 408 ~~-~~~~~l~~al~ 420 (423)
.. ++.+.|.+-|.
T Consensus 347 ~~~d~Fd~l~~rL~ 360 (363)
T PF04864_consen 347 KRDDDFDQLLERLS 360 (363)
T ss_dssp S-HHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 54 44444444443
No 295
>PRK07678 aminotransferase; Validated
Probab=99.71 E-value=1.8e-14 Score=143.81 Aligned_cols=325 Identities=15% Similarity=0.123 Sum_probs=197.7
Q ss_pred CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCC---C-CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF---P-YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (423)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~---~-~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~ 162 (423)
..+++.+||+..+. ..++ .+|++.+|+.+ +.. . ..|+.+...+|-+.+++.++. .+.+++++++++|++.+
T Consensus 43 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~lae~l~~~~~~-~~~v~f~~sGseA~e~A 121 (451)
T PRK07678 43 DIQGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSYFPLTQSHEPAIKLAEKLNEWLGG-EYVIFFSNSGSEANETA 121 (451)
T ss_pred eCCCCEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCccccccCCHHHHHHHHHHHHhCCC-CCEEEEeCCcHHHHHHH
Confidence 35678899997763 3344 36888888875 221 1 123444456788888888754 35899999999999999
Q ss_pred HHHhcC-------CC-CeEEEcCCCchhhHHHHHH-CCC------------eEEEecCCCCCCC---------C---HHH
Q 014492 163 MRCVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDFSL---------N---VEL 209 (423)
Q Consensus 163 ~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~~~---------d---~~~ 209 (423)
++.... +| .+|+....+|++....+.. .|. .+..+|.++.+.. | ++.
T Consensus 122 lklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (451)
T PRK07678 122 FKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKE 201 (451)
T ss_pred HHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHHHHHHHHH
Confidence 885321 23 5788888888755433322 111 1223332111111 1 233
Q ss_pred HHHHhh---cCCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEEEc
Q 014492 210 IADAVE---REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLR 279 (423)
Q Consensus 210 l~~~i~---~~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~ 279 (423)
+++.+. ..++.+|++...+.-.|.+.+ .++++++|+. |+++|.||++..|...+.. ....+..+.++
T Consensus 202 l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv~PDiv--- 278 (451)
T PRK07678 202 IDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGVKPDII--- 278 (451)
T ss_pred HHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCCCCCEE---
Confidence 555563 256888998866666787765 3455566665 9999999999887543322 12222233333
Q ss_pred cChhhhcccC-ccccccccCHHHHHHHHH--------hcCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHH
Q 014492 280 TFSKRAGLAG-LRVGYGAFPLSIIEYLWR--------AKQPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLF 347 (423)
Q Consensus 280 S~SK~~g~~G-~R~G~i~~~~~~~~~l~~--------~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~ 347 (423)
+++|.+| .| +.+|.+++++++.+.+.. ....|+.++++.+++.+.|+. ++..++..+.-...++.|.
T Consensus 279 t~gK~lg-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~ 357 (451)
T PRK07678 279 TMAKGIT-SAYLPLSATAVKKEIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIMENENLIERSAQLGELLLEQLK 357 (451)
T ss_pred Eeecccc-cCCcceeEEEEcHHHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 4689998 56 699999999999887753 223477889988888888763 2233333333334444444
Q ss_pred HHHccCCCCeecCCCceEEEEEeCCC---------CCHHHHHHHHHhCCcEEEeCCC--CCCCCeEEEEec---ChhhHH
Q 014492 348 KLLKDVPFLNPYPSYSNFILCEVTSG---------MDAKKLKDDLAKMGVMIRHYNN--KELKGYVRVSVG---KPEHTD 413 (423)
Q Consensus 348 ~~L~~~~~~~~~p~~~~~~~~~~~~~---------~~~~~l~~~L~~~gI~v~~~~~--~~~~~~iRis~~---~~~~~~ 413 (423)
+.+++.+.+.-..+.|.++.+.+.+. .....+...|.++||++.+... +...+.+||+.. +.++++
T Consensus 358 ~~~~~~~~v~~vrg~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~~~Gv~~~~~g~~v~~~~~~lrl~Ppl~it~~eid 437 (451)
T PRK07678 358 EELGEHPLVGDIRGKGLLVGIELVNDKETKEPADNDKVASVVAACKEKGLIIGKNGDTVAGYNNVLTLSPPLVISSEEIA 437 (451)
T ss_pred HHHhcCCCEEEEEeeceEEEEEEecCCcccCcCchHHHHHHHHHHHHCCcEEeecCccccCCCCEEEEECCCcCCHHHHH
Confidence 44445554433446677777776311 1135677888899999976432 233478999865 444455
Q ss_pred HHHHHHh
Q 014492 414 ALMECLM 420 (423)
Q Consensus 414 ~l~~al~ 420 (423)
++.++++
T Consensus 438 ~~~~~l~ 444 (451)
T PRK07678 438 FIVGTLK 444 (451)
T ss_pred HHHHHHH
Confidence 5444443
No 296
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.70 E-value=2.2e-14 Score=142.98 Aligned_cols=321 Identities=15% Similarity=0.162 Sum_probs=193.0
Q ss_pred CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCC---CC--CCCCcchHHHHHHHHHHhCCC--CCc-EEEeCCHHHH
Q 014492 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF---PY--IYPDPESRRLRAALAKDSGLE--SDH-ILVGCGADEL 158 (423)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~---~~--~Y~~~g~~~lr~~ia~~~g~~--~~~-i~~t~G~~~a 158 (423)
+.+++.+||+..+. ..++ .+|++.+++.+ +.. .+ .++.+...+|-+.+++..+-. ... ++++++++++
T Consensus 35 D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsEA 114 (442)
T TIGR00709 35 DVEGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPLHTLDLTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADA 114 (442)
T ss_pred eCCCCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHHH
Confidence 45678899998774 3333 46888888876 221 11 134444566777777776422 124 5567899999
Q ss_pred HHHHHHHhc--CCCCeEEEcCCCchhhHHHHHH-CC------------CeEEEecCCCCCCC--------CH----HHHH
Q 014492 159 IDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKSDFSL--------NV----ELIA 211 (423)
Q Consensus 159 l~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g------------~~~~~v~~~~~~~~--------d~----~~l~ 211 (423)
++.+++... ....+|+....+|+.....+.. .| ..+..+|.++.... +. +.++
T Consensus 115 ~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (442)
T TIGR00709 115 VEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFE 194 (442)
T ss_pred HHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHH
Confidence 999988432 2236788888888765544332 22 11233332221111 11 1233
Q ss_pred HHhhc-----CCceEEEEcCCCCCcCc-CCCHHHHHHHHc---C-CCEEEEccCCccccCCCchhh--hhccCCcEEEEc
Q 014492 212 DAVER-----EKPKCIFLTSPNNPDGS-IINDEDLLKILE---M-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLR 279 (423)
Q Consensus 212 ~~i~~-----~~~~~i~l~~p~NPtG~-~~~~~~l~~i~~---~-~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~i~ 279 (423)
+.+.. .++.++++...++..|. +.|.+.++++.+ . |+++|.||+|..|...+.... ..+..+.+++
T Consensus 195 ~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~-- 272 (442)
T TIGR00709 195 NFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGIEPDFVV-- 272 (442)
T ss_pred HHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCCCCcEEE--
Confidence 33321 46788888866555565 467777766655 3 999999999998865433222 2222333333
Q ss_pred cChhhhcccCccccccccCHHHHHHHHH--hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc----C
Q 014492 280 TFSKRAGLAGLRVGYGAFPLSIIEYLWR--AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKD----V 353 (423)
Q Consensus 280 S~SK~~g~~G~R~G~i~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~ 353 (423)
++|.++. |+++|+++++++ ++.+.. ....|+.+++++.++.++|+.-+ -+...++.+++.+++.+.|++ .
T Consensus 273 -~gK~l~~-G~Pigav~~~~~-~~~~~~~~~~~T~~gnpla~aaa~a~L~~i~-~~~l~~~~~~~g~~l~~~L~~l~~~~ 348 (442)
T TIGR00709 273 -MSKAVGG-GLPLAVLLIAPE-FDAWQPAGHTGTFRGNQLAMVTGTEALNYWK-DDNLAQNAQERGERITSFLDDMIKEH 348 (442)
T ss_pred -EcccccC-CcccEEEEEchH-HhccCCCcCCCCCCcCHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 7999984 899999999887 444321 12347789999999998885411 123444555666666666654 4
Q ss_pred CCCeecCCCceEEEEEeCCCC--------------CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHH
Q 014492 354 PFLNPYPSYSNFILCEVTSGM--------------DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALM 416 (423)
Q Consensus 354 ~~~~~~p~~~~~~~~~~~~~~--------------~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~ 416 (423)
+.+.-..+.|.++.+++.+.. -...+...+.++||++.+... ..+.+|+... +.++.+++.
T Consensus 349 ~~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~--~~~~l~~~Ppl~it~~ei~~~~ 426 (442)
T TIGR00709 349 PCIGNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETGGR--EGEVFRLLCPITIDQEECEEGI 426 (442)
T ss_pred CCeeeeeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeEEeecCC--CCCEEEEECCCCCCHHHHHHHH
Confidence 444334567888877774211 134567777899999976432 2478999876 344444444
Q ss_pred HHH
Q 014492 417 ECL 419 (423)
Q Consensus 417 ~al 419 (423)
+++
T Consensus 427 ~~l 429 (442)
T TIGR00709 427 SRF 429 (442)
T ss_pred HHH
Confidence 444
No 297
>PRK06062 hypothetical protein; Provisional
Probab=99.70 E-value=2.1e-14 Score=143.18 Aligned_cols=320 Identities=14% Similarity=0.126 Sum_probs=196.6
Q ss_pred CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCC----CCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (423)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~----~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~ 162 (423)
+.+++.+||+..+. ..++ .+|+|.+++.+ +.. ...|..+...+|-+.|++...-..+.++++++++++++.+
T Consensus 49 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~A 128 (451)
T PRK06062 49 DYEGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTVAPAHANDARSEAARLIAERAPGDLSKVFFTNGGADANEHA 128 (451)
T ss_pred ECCCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCCcCCccCCHHHHHHHHHHHHhCCCCCCEEEEcCChHHHHHHH
Confidence 45678899998763 3344 46888888876 221 1233444456777888877653346899999999999999
Q ss_pred HHHhc--CCCCeEEEcCCCchhhHHHHHH-CCC-----------eEEEecCCCCCC------CC-------HHHHHHHhh
Q 014492 163 MRCVL--DPGDKIVDCPPTFTMYEFDAAV-NGA-----------AVVKVPRKSDFS------LN-------VELIADAVE 215 (423)
Q Consensus 163 ~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g~-----------~~~~v~~~~~~~------~d-------~~~l~~~i~ 215 (423)
++... ....+|+....+|+.....+.. .|. .+..++.+..+. -| ++.+++.++
T Consensus 129 lklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~ 208 (451)
T PRK06062 129 VRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIE 208 (451)
T ss_pred HHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHH
Confidence 88432 2236788888888755433322 111 112222111111 12 567777774
Q ss_pred c---CCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEEEccChhhh
Q 014492 216 R---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRA 285 (423)
Q Consensus 216 ~---~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~ 285 (423)
. .++.+|++...+...|.+.+ .+++.++|+. |+++|+||++..|...+.. ....+..+. +.+++|.+
T Consensus 209 ~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv~PD---i~t~gK~l 285 (451)
T PRK06062 209 LEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGVVPD---LITFAKGV 285 (451)
T ss_pred hcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCCCCC---eeeechhh
Confidence 2 45778888877777898887 6777788886 9999999999987533322 112222233 33579999
Q ss_pred cccCc-cccccccCHHHHHHHHHh----cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHH-----HHHHHHHHccCCC
Q 014492 286 GLAGL-RVGYGAFPLSIIEYLWRA----KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKE-----RERLFKLLKDVPF 355 (423)
Q Consensus 286 g~~G~-R~G~i~~~~~~~~~l~~~----~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~-----~~~l~~~L~~~~~ 355 (423)
| .|+ .+|.+++.+++.+.+... ...|+.++++.+++.+.|+.-+- +...++.++. ++.|.+..++.+.
T Consensus 286 g-gG~~Pigav~~~~~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~-~~l~~~~~~~G~~~l~~~L~~l~~~~~~ 363 (451)
T PRK06062 286 N-SGYVPLGGVAISEAIAATFADRPYPGGLTYSGHPLACAAAVATINAMEE-EGIVENAARIGAEVLGPGLRELAERHPS 363 (451)
T ss_pred h-cCCcCcEEEEEcHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 8 674 899999999988877532 12467788888888888753110 1123333333 3333333333443
Q ss_pred CeecCCCceEEEEEeCCC------C--------CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHH
Q 014492 356 LNPYPSYSNFILCEVTSG------M--------DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMEC 418 (423)
Q Consensus 356 ~~~~p~~~~~~~~~~~~~------~--------~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~a 418 (423)
+.-....|.++.+.+.+. . ....+.+.|+++||++.+. .+.+||+.. +.++.+++.++
T Consensus 364 v~~vrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gvl~~~~-----~~~lrl~ppl~~t~~eid~~~~~ 438 (451)
T PRK06062 364 VGEVRGLGVFWALELVADRETREPLAPYGASSAAMAAVKAACKERGLLPFVN-----GNRIHVVPPCTVTEDEVREGLAI 438 (451)
T ss_pred EEeEeccccEEEEEEcccccccCCCcccchhhHHHHHHHHHHHHCCcEEeec-----CCEEEEECCccCCHHHHHHHHHH
Confidence 333345677777766311 0 1346778888999998753 257999874 44455554444
Q ss_pred Hh
Q 014492 419 LM 420 (423)
Q Consensus 419 l~ 420 (423)
++
T Consensus 439 l~ 440 (451)
T PRK06062 439 LD 440 (451)
T ss_pred HH
Confidence 43
No 298
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.70 E-value=7.5e-15 Score=142.53 Aligned_cols=325 Identities=18% Similarity=0.162 Sum_probs=206.2
Q ss_pred CCCCCCeeEcCCCCC--CCC-CCHHHHHHHhc-C---C-CCCCC-CCcchHHHHHHHHHHhCC-CCCcEEEeCCHHHHHH
Q 014492 91 GRKPEDIVKIDANEN--PYG-PPPEVREALGQ-L---K-FPYIY-PDPESRRLRAALAKDSGL-ESDHILVGCGADELID 160 (423)
Q Consensus 91 ~~~~~~~i~l~~~~~--~~~-~~~~v~~al~~-~---~-~~~~Y-~~~g~~~lr~~ia~~~g~-~~~~i~~t~G~~~al~ 160 (423)
+..++.+|||.++.+ .++ .+|.|++|+.+ + . ...+| .....-++-+.+.+.... ..+.+++++++++|++
T Consensus 52 DvdG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~~~~~~~~e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~E 131 (447)
T COG0160 52 DVDGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTHTRDLYYEPYVELAEKLTALAPGSGLKKVFFGNSGAEAVE 131 (447)
T ss_pred eCCCCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHhCCcccCCeEEecCCcHHHHH
Confidence 456888999998644 343 47999999876 2 2 22333 223345677777776654 4568999999999999
Q ss_pred HHHHHhc--CCCCeEEEcCCCchhhHHHH-HHC-------------CCeEEEecCCCCC----CC--------CHHHHHH
Q 014492 161 LIMRCVL--DPGDKIVDCPPTFTMYEFDA-AVN-------------GAAVVKVPRKSDF----SL--------NVELIAD 212 (423)
Q Consensus 161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~-~~~-------------g~~~~~v~~~~~~----~~--------d~~~l~~ 212 (423)
.+++.-. .....|+...-+|+.....+ ... ...++.+|.+..+ .. ..+.+++
T Consensus 132 ~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~ 211 (447)
T COG0160 132 AAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIER 211 (447)
T ss_pred HHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHH
Confidence 9998431 23467888888886333222 111 1225555532211 11 2344555
Q ss_pred Hhhc-----CCceEEEEcCCCCCcCcCCCHH-HH---HHHHcC-CCEEEEccCCccccCCCchhhh--hccCCcEEEEcc
Q 014492 213 AVER-----EKPKCIFLTSPNNPDGSIINDE-DL---LKILEM-PILVVLDEAYTEFSGLESRMEW--VKKHDNLIVLRT 280 (423)
Q Consensus 213 ~i~~-----~~~~~i~l~~p~NPtG~~~~~~-~l---~~i~~~-~~~li~Deay~~~~~~~~~~~~--~~~~~~~i~i~S 280 (423)
.+.. .++.++++...+...|.+.+.+ -+ +++|+. |+++|+||++..|...+..+.. .+..+.++ +
T Consensus 212 ~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv~PDiv---t 288 (447)
T COG0160 212 ALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIV---T 288 (447)
T ss_pred HHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccchhhhhcCCCCCEE---E
Confidence 4432 3588999998899999877554 34 445555 9999999999998865533222 12223333 4
Q ss_pred ChhhhcccCccccccccCHHHHHHHHH-hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHc----cCCC
Q 014492 281 FSKRAGLAGLRVGYGAFPLSIIEYLWR-AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLK----DVPF 355 (423)
Q Consensus 281 ~SK~~g~~G~R~G~i~~~~~~~~~l~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~----~~~~ 355 (423)
++|.+| .|+.+|.++..+++.+.... ....|..|+.+.+++.+.|+.-+ -+.+.++.++.-+++.+.|. +.+.
T Consensus 289 ~aK~ig-~G~Pl~avv~r~ei~~~~~g~~~~Tf~GNpva~Aaa~AvL~vie-~e~L~~~a~~~G~~l~~~L~~l~~~~~~ 366 (447)
T COG0160 289 LAKSLG-GGLPLSAVVGRAEIMDWPPGGHGGTFGGNPVACAAALAVLDVIE-EENLLERAAELGEYLRDRLEELQEKHPL 366 (447)
T ss_pred eccccc-CCCceeEEeccHHhcccCCcccCCCCCcCHHHHHHHHHHHHHHH-HccHHHHHHHHHHHHHHHHHHHHhhcCc
Confidence 789999 69999999999998872221 22337889999999998886311 12344444555555555554 3443
Q ss_pred CeecCCCceEEEEEeCCC--------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 356 LNPYPSYSNFILCEVTSG--------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 356 ~~~~p~~~~~~~~~~~~~--------~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
+--..+-|.++.+++-+. .-...+.+.+.++|+++..++. ..+.|||.....-+.++++++++.|
T Consensus 367 IgdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~Glil~~~G~--~~nviRi~PPL~is~e~~d~~l~il 439 (447)
T COG0160 367 IGDVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAFERGLLLLTCGP--HGNVLRILPPLTISDEELDEGLDIL 439 (447)
T ss_pred eecccccceEEEEEEecCCCCCCCCHHHHHHHHHHHHHcCCEEeccCC--CCcEEEEeCCcccCHHHHHHHHHHH
Confidence 333456788888887521 2256778888999998887662 3579999976433335555555543
No 299
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.69 E-value=1e-14 Score=140.99 Aligned_cols=292 Identities=14% Similarity=0.070 Sum_probs=199.3
Q ss_pred HHHHHhc--CCCCCCCCCcc--hHHHHHHHHHHhCCCCC--cEEEeCCHHHHHHHHHHHhc-CCCCeEEEcCCCch-hhH
Q 014492 113 VREALGQ--LKFPYIYPDPE--SRRLRAALAKDSGLESD--HILVGCGADELIDLIMRCVL-DPGDKIVDCPPTFT-MYE 184 (423)
Q Consensus 113 v~~al~~--~~~~~~Y~~~g--~~~lr~~ia~~~g~~~~--~i~~t~G~~~al~~~~~~l~-~~gd~Vl~~~p~y~-~~~ 184 (423)
..+++.+ +...|+-|... ..++++.+.+.++.+.+ -++++.|++.+++.++..++ ++|++|++.. .|. .+.
T Consensus 19 ~~~~~~~~~~~~~HRs~~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG~r~~ 97 (374)
T TIGR01365 19 SIEELKNAPLGRSHRSKLGKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFGKGWV 97 (374)
T ss_pred hHHHHhhhhcccCcCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHHHHHH
Confidence 5677765 23334444432 56788888999997433 36679999999999999999 5888888765 665 334
Q ss_pred -HHHHHCCC-eEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcCCCEEEEccCCccccCC
Q 014492 185 -FDAAVNGA-AVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGL 262 (423)
Q Consensus 185 -~~~~~~g~-~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~li~Deay~~~~~~ 262 (423)
..++..|+ ++..+..+.+..+|+++++. . +.|++++....||+..|.+++.+.. .+.++|+|.+=+....
T Consensus 98 ~eia~~~g~~~v~~l~~~~g~~~~~~~ve~--~----~~v~~vhnETSTGv~npv~~i~~~~-~~~lliVDavSs~g~~- 169 (374)
T TIGR01365 98 TDVTKQLKLPDVRVLEAEYGKLPDLKKVDF--K----NDVVFTWNGTTSGVRVPNGDFIPAD-REGLTICDATSAAFAQ- 169 (374)
T ss_pred HHHHHhcCCCCcEEEcCCCCCCCCHHHcCC--C----CCEEEecCCCchheecccccccccc-CCCcEEEEccchhcCC-
Confidence 77888999 47777766677889999873 1 2367889999999999986544322 3889999998764332
Q ss_pred CchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHh-------------------------cCCCCCcHH
Q 014492 263 ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA-------------------------KQPYNVSVA 317 (423)
Q Consensus 263 ~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~-------------------------~~~~~~~~~ 317 (423)
+-... +-.+++.|-.|++++|+ .+++++.+++.+++.... ..+++++..
T Consensus 170 ~l~~d-----~iDv~~tgsQK~L~~pp-Gls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~ 243 (374)
T TIGR01365 170 DLDYH-----KLDVVTFSWQKVLGGEG-AHGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSML 243 (374)
T ss_pred CCChh-----HCcEEEEechhccCCCC-ceEEEEECHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHH
Confidence 11111 24578888899998765 256777787777654421 112345555
Q ss_pred HHHHHHHHhC---ChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCC----Cce-EEEEEeCCC-C-----C-----HHH
Q 014492 318 AEVAACAALQ---NPIYLEKVKEALIKERERLFKLLKDVPFLNPYPS----YSN-FILCEVTSG-M-----D-----AKK 378 (423)
Q Consensus 318 ~~~a~~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~----~~~-~~~~~~~~~-~-----~-----~~~ 378 (423)
...++..+|+ .++.++.+.++.+++++.+++.++++++....+. .++ .+.+.++++ . + ..+
T Consensus 244 ~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~~~~~~~~~~~~~~~~~~~~ 323 (374)
T TIGR01365 244 CVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLKVVDPAIDALDEDAQADFAKE 323 (374)
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEEeCCccccccccchhhHHHHH
Confidence 6666666664 2235889999999999999999999985554331 222 244566433 3 3 688
Q ss_pred HHHHHHhCCcEEEeCCCCCCCCeEEEEecC---hhhHHHHHHHH
Q 014492 379 LKDDLAKMGVMIRHYNNKELKGYVRVSVGK---PEHTDALMECL 419 (423)
Q Consensus 379 l~~~L~~~gI~v~~~~~~~~~~~iRis~~~---~~~~~~l~~al 419 (423)
+.+.|+++||.+.+|.....+..+||+... .++++.|.++|
T Consensus 324 ~~~~l~~~gi~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l 367 (374)
T TIGR01365 324 LISTLEKEGVAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWL 367 (374)
T ss_pred HHHHHHHCCEEEeccccccCCCceEEecCCcCCHHHHHHHHHHH
Confidence 999999999999877664446899998653 44444444444
No 300
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.69 E-value=1.1e-15 Score=143.51 Aligned_cols=303 Identities=16% Similarity=0.152 Sum_probs=209.2
Q ss_pred CCCHHHHHHHhcCCCCCC-----CCCc-chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCch
Q 014492 108 GPPPEVREALGQLKFPYI-----YPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT 181 (423)
Q Consensus 108 ~~~~~v~~al~~~~~~~~-----Y~~~-g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~ 181 (423)
++.+.+.+++........ -++. ...++++.+|+++|+ ++.+++.-|- ....+.+.++++||.-|+...-.|.
T Consensus 155 ~ca~~~~~~~~kygl~~css~~e~G~~~~hkelE~l~A~f~g~-e~a~vF~mGf-~TNs~~~p~l~~~gsLIiSDelNHa 232 (519)
T KOG1357|consen 155 PCAEASLKSFDKYGLSRCSSRHEAGTTEEHKELEELVARFLGV-EDAIVFSMGF-ATNSMNIPSLLGKGSLIISDELNHA 232 (519)
T ss_pred cCChHHHHHHHHhcccccccchhcccHHHHHHHHHHHHHhcCC-cceEEEeccc-cccccCcceeecCCcceeeccccch
Confidence 456778888877432211 1222 246899999999996 5788888884 4566777889999999999999999
Q ss_pred hhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc------CC-----ceEEEEc-CCCCCcCcCCCHHHHHHHHcC-CC
Q 014492 182 MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER------EK-----PKCIFLT-SPNNPDGSIINDEDLLKILEM-PI 248 (423)
Q Consensus 182 ~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~------~~-----~~~i~l~-~p~NPtG~~~~~~~l~~i~~~-~~ 248 (423)
.+...++..|+.++.+.. + |.+.||+.+++ ++ -|++++. .-...-|.+..+.++.++.+. ..
T Consensus 233 Si~~GaRLSgAtiRVfkH--N---dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkkyka 307 (519)
T KOG1357|consen 233 SLITGARLSGATTRVFRH--N---DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKA 307 (519)
T ss_pred heeccccccCceEEEEec--C---CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecccHHHHHhhccccE
Confidence 999999999999888872 3 34555554432 11 1344443 777889999999999999998 99
Q ss_pred EEEEccCCccccCCCch-----hhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC----CCCcHH-H
Q 014492 249 LVVLDEAYTEFSGLESR-----MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP----YNVSVA-A 318 (423)
Q Consensus 249 ~li~Deay~~~~~~~~~-----~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~----~~~~~~-~ 318 (423)
+++.||+|+-.+.+... ...++..+.+|.+++|.|+||.+| ||+.+++++++.++..... ..+|++ +
T Consensus 308 yl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~G---Gyiagsk~lid~lrt~s~~~~yat~~sppva 384 (519)
T KOG1357|consen 308 YLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAAG---GYIAGSKELIDYLRTPSPSALYATSLSPPVA 384 (519)
T ss_pred EEEeeccccccccCCCCcceeeccCCCchhheeecceehhhccccc---ceecCcHHHHhhhccCCCceeecccCChHHH
Confidence 99999999876643321 223345677899999999999888 9999999999988755432 133443 4
Q ss_pred HHHHHHHhCC------hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEe
Q 014492 319 EVAACAALQN------PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRH 392 (423)
Q Consensus 319 ~~a~~~~l~~------~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~ 392 (423)
|.. ...+.. .+..++..+++.+++.+++..|...+++..-......+.+-+-.+..-..+.+.|++++|.+.-
T Consensus 385 qq~-~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~gfivyG~~dSpVvplll~~~~k~~~f~r~~l~~nigvVv 463 (519)
T KOG1357|consen 385 QQI-LTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKMGFIVYGNNDSPVVPLLLYGPAKIVAFSREMLERNIGVVV 463 (519)
T ss_pred HHH-HHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcCcEEEecCCCCCcceeeecCcccccHHHHHHHhcCceEEE
Confidence 433 333332 2456788889999999999999998866544444433322221122345677788877766653
Q ss_pred --CCC-CCCCCeEEEEecChhhHHHHHHHHhh
Q 014492 393 --YNN-KELKGYVRVSVGKPEHTDALMECLMH 421 (423)
Q Consensus 393 --~~~-~~~~~~iRis~~~~~~~~~l~~al~~ 421 (423)
+.. +-.++.+|++.+.....|++..+++.
T Consensus 464 vgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~ 495 (519)
T KOG1357|consen 464 VGFPATPLLESRARFCLSASHTKEDLDRALEV 495 (519)
T ss_pred EeCCCchHHHhHHHhhhcccccHHHHHHHHHH
Confidence 333 44567889998865555666665554
No 301
>PRK06105 aminotransferase; Provisional
Probab=99.69 E-value=2.7e-14 Score=142.83 Aligned_cols=319 Identities=13% Similarity=0.126 Sum_probs=193.6
Q ss_pred CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCC-C--C---CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHH
Q 014492 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF-P--Y---IYPDPESRRLRAALAKDSGLESDHILVGCGADELID 160 (423)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~-~--~---~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~ 160 (423)
..+++.+||+..+. ..++ .+|++.+|+.+ +.. . . .|..+...++-+.|++.++-+.+.++++++++++++
T Consensus 44 D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve 123 (460)
T PRK06105 44 DDAGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFYHTFSHKSHGPVIDLAEKLVAMAPVPMSKVFFTNSGSEAND 123 (460)
T ss_pred ECCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHH
Confidence 45678899998763 3343 46888888876 221 1 1 133333456778888877544468999999999999
Q ss_pred HHHHHhc------C-CC-CeEEEcCCCchhhHHHHHH-CCC------------eEEEecCCCCCCC-------------C
Q 014492 161 LIMRCVL------D-PG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDFSL-------------N 206 (423)
Q Consensus 161 ~~~~~l~------~-~g-d~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~~~-------------d 206 (423)
.+++... . +| .+|+...-+|+.....+-. .|. .+..+|.++.+.. .
T Consensus 124 ~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 203 (460)
T PRK06105 124 TVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRL 203 (460)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHH
Confidence 9998532 1 22 5788888888654432211 110 1222222111111 1
Q ss_pred HHHHHHHhh---cCCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCchh--hhhccCCcEE
Q 014492 207 VELIADAVE---REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLI 276 (423)
Q Consensus 207 ~~~l~~~i~---~~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i 276 (423)
.+++++.+. ..++.+|++...+...|.+.+ .+++++||+. |+++|+||++..|...+... ...+..+.
T Consensus 204 ~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~PD-- 281 (460)
T PRK06105 204 ANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGIKPD-- 281 (460)
T ss_pred HHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCCCCC--
Confidence 355676663 246788888877777788776 5566677766 99999999998775322221 11222233
Q ss_pred EEccChhhhcccC-ccccccccCHHHHHHHHHh---------cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Q 014492 277 VLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA---------KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERL 346 (423)
Q Consensus 277 ~i~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~~---------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l 346 (423)
+.+++|.++ .| +.+|.+++++++.+.+... ...++.++++..++.+.|+.-+ -++..++.++..++|
T Consensus 282 -i~~~gK~lg-gG~~P~~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~-~~~l~~~v~~~g~~l 358 (460)
T PRK06105 282 -ILVMSKQLS-SSYQPLSAVLMNEKVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAIIE-ERDLVGNAAERGARL 358 (460)
T ss_pred -eeeeecccc-cCcccceEEEEcHHHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHHHH-hccHHHHHHHHHHHH
Confidence 335789988 56 6899999999998877532 2346788888888877775311 012334444444444
Q ss_pred HHHHc---cCCCCeecCCCceEEEEEeCCCC------C-----HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---Ch
Q 014492 347 FKLLK---DVPFLNPYPSYSNFILCEVTSGM------D-----AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KP 409 (423)
Q Consensus 347 ~~~L~---~~~~~~~~p~~~~~~~~~~~~~~------~-----~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~ 409 (423)
.+.|+ +.+.+.-..+.|.+..+++.... + ...+...+.++||++.+.+ +.+||+.. +.
T Consensus 359 ~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~~~Gvl~~~~g-----~~i~l~Ppl~it~ 433 (460)
T PRK06105 359 QARLRALADHPLVGEVRGVGLIAAVELVADKATKTPFEPPGKVGARANAAAHEHGVISRAMG-----DTLAFCPPLIITA 433 (460)
T ss_pred HHHHHHhhcCCCeEEEEecceEEEEEEecCcccCCCCCchhHHHHHHHHHHHHCCeEEEecC-----CEEEEECCCccCH
Confidence 44444 34443334466777777763110 1 2467777889999998742 58999865 44
Q ss_pred hhHHHHHHHH
Q 014492 410 EHTDALMECL 419 (423)
Q Consensus 410 ~~~~~l~~al 419 (423)
++.+++.+.+
T Consensus 434 ~eid~~~~~l 443 (460)
T PRK06105 434 AQVDEMVDRF 443 (460)
T ss_pred HHHHHHHHHH
Confidence 4444444444
No 302
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.68 E-value=1e-13 Score=137.71 Aligned_cols=319 Identities=15% Similarity=0.101 Sum_probs=194.6
Q ss_pred CCCCCCeeEcCCCCC--CCC-CCHHHHHHHhc-CCCC--CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHH
Q 014492 91 GRKPEDIVKIDANEN--PYG-PPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (423)
Q Consensus 91 ~~~~~~~i~l~~~~~--~~~-~~~~v~~al~~-~~~~--~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~ 164 (423)
..+++.+||+..+.. .++ .+|++.+++.+ +... ..++.+...++-+.+.+... ..+.++++++++++++.+++
T Consensus 49 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~la~~l~~~~p-~~~~v~f~~sGseA~e~Alk 127 (428)
T PRK12389 49 DVDGNKYIDYLAAYGPIITGHAHPHITKAITEAAENGVLYGTPTELEIEFAKMLKEAIP-SLEKVRFVNSGTEAVMTTIR 127 (428)
T ss_pred eCCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCccCCCCHHHHHHHHHHHHhCC-CCcEEEEeCCHHHHHHHHHH
Confidence 355788999977633 344 36888888876 3221 23455455677788877765 35789999999999999988
Q ss_pred Hhc--CCCCeEEEcCCCchhhHHHHHH-CCCeEE--------Eec--CCCC----CCCCHHHHHHHhhc--CCceEEEEc
Q 014492 165 CVL--DPGDKIVDCPPTFTMYEFDAAV-NGAAVV--------KVP--RKSD----FSLNVELIADAVER--EKPKCIFLT 225 (423)
Q Consensus 165 ~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~--------~v~--~~~~----~~~d~~~l~~~i~~--~~~~~i~l~ 225 (423)
... ....+|+...-+|+.....+.. .|.... .++ ..++ ...|++.+++.+.+ .++.+|++.
T Consensus 128 lAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~vaavi~E 207 (428)
T PRK12389 128 VARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDEVAAVLVE 207 (428)
T ss_pred HHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCcEEEEEEe
Confidence 432 1236788888888765433322 221111 000 0000 01268889888853 357788888
Q ss_pred CCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCc-hhhhhccCCcEEEEccChhhhcccCccccccccCH
Q 014492 226 SPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLES-RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299 (423)
Q Consensus 226 ~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~-~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~ 299 (423)
......|.+.+ .+++.++|+. |+++|+||++..|..... .....+..+.+ -+++|.+| .|+.+|.+++++
T Consensus 208 Pv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt~~~~a~~~~gv~PDi---vt~gK~lg-gG~Pi~av~~~~ 283 (428)
T PRK12389 208 PIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRFMYGGAQDLLGVEPDL---TALGKIIG-GGLPIGAYGGRK 283 (428)
T ss_pred CCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccccCcchhhHHhCCCCCe---eeechhhc-CCCceeEEeEHH
Confidence 77787898887 6777888876 999999999997732111 11122222333 36799997 789999999999
Q ss_pred HHHHHHHH-----hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHc----cCCCCe-ecCCCceEEEEE
Q 014492 300 SIIEYLWR-----AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLK----DVPFLN-PYPSYSNFILCE 369 (423)
Q Consensus 300 ~~~~~l~~-----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~----~~~~~~-~~p~~~~~~~~~ 369 (423)
++.+.+.. ....|+.++++.+++.+.|+.-+- +...++.+++-+++.+.|+ +.+.+. +....+ ++.+.
T Consensus 284 ~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~-~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~~g-~~gi~ 361 (428)
T PRK12389 284 DIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQ-EGVYEKLDRLGAMLEEGILEAAEKHGITITINRLKG-ALTVY 361 (428)
T ss_pred HHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCc-EEEEE
Confidence 99887742 123467888888888877753110 1233444445555555554 345332 223344 33344
Q ss_pred eCC-CC---------C---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHh
Q 014492 370 VTS-GM---------D---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLM 420 (423)
Q Consensus 370 ~~~-~~---------~---~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~ 420 (423)
+.. .. + ...+.+.|.++||++.+... +.+.+++. +.++.+++.++++
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~----~~~~~~l~~t~e~id~~~~~l~ 422 (428)
T PRK12389 362 FTDEKVTNYDQAERSDGEAFGKFFKLMLNQGINLAPSKY----EAWFLTTAHTEEDIEETLEAVD 422 (428)
T ss_pred EeCCCCCChhhhcccCHHHHHHHHHHHHHCCcEeecCCC----CCeeecCCCCHHHHHHHHHHHH
Confidence 421 10 1 35677888899999987532 22345543 3444555555554
No 303
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.68 E-value=9.4e-15 Score=141.40 Aligned_cols=300 Identities=15% Similarity=0.182 Sum_probs=195.3
Q ss_pred CCCCCeeEcCCCC--CCCCC-CHHHHHHHhc-CC---C-CCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492 92 RKPEDIVKIDANE--NPYGP-PPEVREALGQ-LK---F-PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (423)
Q Consensus 92 ~~~~~~i~l~~~~--~~~~~-~~~v~~al~~-~~---~-~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~ 163 (423)
.+++.++|+..+. ..++. +|++.+++.+ +. + ...|+.....++.+.++++.+. +.++++++++++++.++
T Consensus 21 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~l~~~~~~--~~v~~~~SGseA~e~Al 98 (364)
T PRK04013 21 SQGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVVAGPMFEHEEKEEMLEELSKWVNY--EYVYMGNSGTEAVEAAL 98 (364)
T ss_pred CCCCEEEEcccChhhccCCCCCHHHHHHHHHHHHhcCCccCCcCCHHHHHHHHHHHhhcCC--CEEEEeCchHHHHHHHH
Confidence 4577899997763 44543 5888888876 22 1 1235555567888999988764 58999999999999999
Q ss_pred HHhc-CCC-CeEEEcCCCchhhHHHHHHC-C-------Ce-----EEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCC
Q 014492 164 RCVL-DPG-DKIVDCPPTFTMYEFDAAVN-G-------AA-----VVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPN 228 (423)
Q Consensus 164 ~~l~-~~g-d~Vl~~~p~y~~~~~~~~~~-g-------~~-----~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~ 228 (423)
+... -.| ++|+....+|+.....+-.. + .. +..+| ..|++.+++.+. .++++|++...+
T Consensus 99 klar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~-----~~d~~~l~~~i~-~~~aAvivEpi~ 172 (364)
T PRK04013 99 KFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIP-----FNDVEAAKEAIT-KETAAVIFEPIQ 172 (364)
T ss_pred HHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEec-----CCCHHHHHHHhc-CCcEEEEEcCCc
Confidence 8542 234 78999999897654333221 1 11 12222 126889999886 689999998777
Q ss_pred CCcCcCC-C---HHHHHHHHcC-CCEEEEccCCccccCCCchh--hhhccCCcEEEEccChhhhcccCccccccccCHHH
Q 014492 229 NPDGSII-N---DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI 301 (423)
Q Consensus 229 NPtG~~~-~---~~~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~ 301 (423)
...|... + .++++++|+. |+++|+||++..+ ..+... ...+..+++++ ++|.+| .|+.+|.++.+.++
T Consensus 173 g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~~~a~~~~gv~PDiv~---~gK~lg-gG~P~~a~~~~~~~ 247 (364)
T PRK04013 173 GEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGKFLAIEHYKVEPDIVT---MGKGIG-NGVPVSLTLTNFDV 247 (364)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCchhHHHhcCCCCCEEE---eccccc-CCceeEEEEecccc
Confidence 7667655 5 5667777876 9999999999977 333322 22233344443 589998 68999988887665
Q ss_pred HHHHHHhcCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHH
Q 014492 302 IEYLWRAKQPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKK 378 (423)
Q Consensus 302 ~~~l~~~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 378 (423)
.. ......|+.++++..++.+.|+- ++.+++.++. + ..+.. +.+.-..+.|.++-+++.+ ....
T Consensus 248 ~~--~~~~~T~~gnp~~~aaa~a~l~~i~~~~l~~~~~~~-------l-~~l~~-~~v~~vRG~Gl~~gve~~~--~~~~ 314 (364)
T PRK04013 248 ER--GKHGSTFGGNPLACKAVAVTLRILRRERLVEKAGEK-------F-IEIKG-ERVVTTRGRGLMIGIVLKK--PVGK 314 (364)
T ss_pred cC--CCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHH-------H-HHhcc-CcceeeeeCcEEEEEEeCC--cHHH
Confidence 21 12234577889988888877753 2333333322 2 22322 3333345678888888852 3567
Q ss_pred HHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014492 379 LKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH 421 (423)
Q Consensus 379 l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~ 421 (423)
+.+.+.++|+++.+.+ .+.+||.....-+.+++.+++++
T Consensus 315 i~~~~~~~Gll~~~~g----~~vlr~~Ppl~it~~~i~~~~~~ 353 (364)
T PRK04013 315 YVEELQNRGYLVHTAG----QRVIRLLPPLIISKDTMEEAKSA 353 (364)
T ss_pred HHHHHHhCCcEEeeCC----CCEEEEeCCcccCHHHHHHHHHH
Confidence 8888999999997643 47899997632222444444443
No 304
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.68 E-value=4.7e-14 Score=139.56 Aligned_cols=319 Identities=14% Similarity=0.156 Sum_probs=195.1
Q ss_pred CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCC---CC--CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF---PY--IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (423)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~---~~--~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~ 161 (423)
+.+++.++|+..+. ..++ .+|++.+|+.+ +.. .. .+..+...+|-+.+++..+-..+.++++++++++++.
T Consensus 39 D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~SGsEAve~ 118 (428)
T PRK07986 39 LADGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHPPAIELCRKLVAMTPQPLECVFLADSGSVAVEV 118 (428)
T ss_pred eCCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCCccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHH
Confidence 35577899997763 3343 36888888876 221 11 1233334567777777765344789999999999999
Q ss_pred HHHHhcC------C-CCeEEEcCCCchhhHHHHHHC-CC-------------eEEEecCCC-CC-----CCCHHHHHHHh
Q 014492 162 IMRCVLD------P-GDKIVDCPPTFTMYEFDAAVN-GA-------------AVVKVPRKS-DF-----SLNVELIADAV 214 (423)
Q Consensus 162 ~~~~l~~------~-gd~Vl~~~p~y~~~~~~~~~~-g~-------------~~~~v~~~~-~~-----~~d~~~l~~~i 214 (423)
+++.... . ..+|+....+|++....+... +. .+..+|... .+ .-|++++++.+
T Consensus 119 AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l 198 (428)
T PRK07986 119 AMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLM 198 (428)
T ss_pred HHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHH
Confidence 9885431 2 367898888887543322211 11 112233111 11 12567787777
Q ss_pred hc--CCceEEEEcCC-CCCcCcCC-CH---HHHHHHHcC-CCEEEEccCCccccCCCchh--hhhccCCcEEEEccChhh
Q 014492 215 ER--EKPKCIFLTSP-NNPDGSII-ND---EDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKR 284 (423)
Q Consensus 215 ~~--~~~~~i~l~~p-~NPtG~~~-~~---~~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~i~S~SK~ 284 (423)
.. .++.+|++... +.-.|.+. +. +++.++|+. |+++|+||++..|...+... ...+..+. ++ +++|.
T Consensus 199 ~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv~PD-i~--t~gK~ 275 (428)
T PRK07986 199 AAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFACEHAGIAPD-IL--CLGKA 275 (428)
T ss_pred HhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeeeecccCCCCC-EE--Eechh
Confidence 52 35667777653 55556544 43 455666665 99999999997764322211 11222233 33 48999
Q ss_pred hcccC-ccccccccCHHHHHHHHHh-------cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccC---
Q 014492 285 AGLAG-LRVGYGAFPLSIIEYLWRA-------KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDV--- 353 (423)
Q Consensus 285 ~g~~G-~R~G~i~~~~~~~~~l~~~-------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~--- 353 (423)
++ .| +.+|.+++++++.+.+... ...|+.++++.+++.+.|+.-+ -+...++.+++-+++.+.|+++
T Consensus 276 l~-gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~-~~~~~~~~~~~g~~l~~~l~~l~~~ 353 (428)
T PRK07986 276 LT-GGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLE-SGDWQQQVAAIEAQLREELAPLRDA 353 (428)
T ss_pred hh-CCcccCcchhchHHHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 97 77 5888889999998887642 2346778888888887775411 0123445555555555555543
Q ss_pred CCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHH
Q 014492 354 PFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECL 419 (423)
Q Consensus 354 ~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al 419 (423)
+.+.-....|.++.+.+.+......+.+.|.++||++.+.+ +.+|+... +.++.+++.+++
T Consensus 354 ~~i~~vRg~Gl~~~ve~~~~~~~~~~~~~l~~~Gl~~~~~g-----~~i~~~Ppl~it~~ei~~~~~~l 417 (428)
T PRK07986 354 PMVADVRVLGAIGVVETTRPVNMAALQRFFVEQGVWIRPFG-----KLIYLMPPYIILPEQLQRLTAAV 417 (428)
T ss_pred CCEEeEeccceEEEEEeCCcccHHHHHHHHHHCCcEEEecC-----CEEEEeCCCCCCHHHHHHHHHHH
Confidence 33322345677877888644456788899999999998753 58999865 344444444444
No 305
>PRK06149 hypothetical protein; Provisional
Probab=99.68 E-value=2.6e-14 Score=154.87 Aligned_cols=322 Identities=15% Similarity=0.139 Sum_probs=200.0
Q ss_pred CCCCCeeEcCCCCCCCC-CCHHHHHHHhc-CC---CCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHH-
Q 014492 92 RKPEDIVKIDANENPYG-PPPEVREALGQ-LK---FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC- 165 (423)
Q Consensus 92 ~~~~~~i~l~~~~~~~~-~~~~v~~al~~-~~---~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~- 165 (423)
..++.++|+.++...++ .+|+|.+++.+ +. ...+|..+...++.+.+++.+.-..+.+++++++++|++.+++.
T Consensus 582 ~dG~~ylD~~~~~~~lGh~hp~v~~Ai~~q~~~l~~~~~~~~~~~~elae~L~~~~p~~~~~v~f~~SGsEA~e~AlklA 661 (972)
T PRK06149 582 MAGRSYLDMVNNVTVLGHGHPRLAAAAARQWSLLNTNSRFHYAAVAEFSERLAALAPDGLDTVFLVNSGSEANDLAIRLA 661 (972)
T ss_pred CCCCEEEECCCCccccCCCCHHHHHHHHHHHHhccccccccCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHH
Confidence 45788999988776677 67999988865 22 22234333456788888888743346899999999999999983
Q ss_pred --hcCCCCeEEEcCCCchhhHHHHHH-CC-----C--------eEEEecCCCC----CC-CC-----HHHHHHHhh----
Q 014492 166 --VLDPGDKIVDCPPTFTMYEFDAAV-NG-----A--------AVVKVPRKSD----FS-LN-----VELIADAVE---- 215 (423)
Q Consensus 166 --l~~~gd~Vl~~~p~y~~~~~~~~~-~g-----~--------~~~~v~~~~~----~~-~d-----~~~l~~~i~---- 215 (423)
..+ ...|+...-+|++....+.. .+ . .+..++..+. +. .| .+++++.++
T Consensus 662 r~~tg-r~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 740 (972)
T PRK06149 662 WAASG-RRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDA 740 (972)
T ss_pred HHhcC-CCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhh
Confidence 333 35677777777643322211 00 0 1222322111 11 11 234333332
Q ss_pred -cCCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch---hhhhccCCcEEEEccChhhhc
Q 014492 216 -REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR---MEWVKKHDNLIVLRTFSKRAG 286 (423)
Q Consensus 216 -~~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~---~~~~~~~~~~i~i~S~SK~~g 286 (423)
..++.+|++.......|.+.+ .+++.++|+. |+++|+||++..|...+.. ....+..+.++ +++|.+|
T Consensus 741 ~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDiv---t~gK~lg 817 (972)
T PRK06149 741 SGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDII---TMAKGMG 817 (972)
T ss_pred cCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEE---Eeccccc
Confidence 245778888776666788777 6677777776 9999999999777543321 11122223333 6799998
Q ss_pred ccCccccccccCHHHHHHHHH---hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHc----cCCCCeec
Q 014492 287 LAGLRVGYGAFPLSIIEYLWR---AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLK----DVPFLNPY 359 (423)
Q Consensus 287 ~~G~R~G~i~~~~~~~~~l~~---~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~----~~~~~~~~ 359 (423)
.|+.+|.+++++++.+.+.. ....++.|+++..++.+.|+--+ -+...++.++.-++|.+.|+ +.+.+...
T Consensus 818 -~G~Pl~av~~~~~i~~~~~~~~~~~sT~~gnP~~~aaala~L~~i~-~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~v 895 (972)
T PRK06149 818 -NGHPLGAVITRREIAEALEAEGYFFSSTGGSPVSCRIGMAVLDVLR-EEKLQENARRVGDHLKARLEALADRHPLIGAV 895 (972)
T ss_pred -CCeeeEEEEEcHHHHhhhccCCcccCCCCCCHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE
Confidence 78999999999999887753 12335678888888888875311 01233334444444444443 45544445
Q ss_pred CCCceEEEEEeCCC--------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 360 PSYSNFILCEVTSG--------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 360 p~~~~~~~~~~~~~--------~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
.+.|.++.+++... .....+++.|+++||++.+.+. ..+.+||... +.++.+.+.+++++
T Consensus 896 rG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~~Gvl~~~~g~--~~~vl~~~Ppl~it~~~id~~~~~l~~ 966 (972)
T PRK06149 896 HGMGLYLGVELVRDRQTLEPATEETAAICDRLLELGVIMQPTGD--HLNILKIKPPLCLDRESADFFVDMLDR 966 (972)
T ss_pred eecceEEEEEEecCcccCCCChHHHHHHHHHHHhCCeEEeecCC--CCCEEEEECCCcCCHHHHHHHHHHHHH
Confidence 67788888877311 1145678888899999987542 2468999865 45555555555543
No 306
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.68 E-value=3.9e-14 Score=134.20 Aligned_cols=217 Identities=18% Similarity=0.141 Sum_probs=161.2
Q ss_pred CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHH----HHHCCCeEEEecCC
Q 014492 125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRK 200 (423)
Q Consensus 125 ~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~ 200 (423)
++++|....+++.+++..|. .+.++.+++..|+..++..++.+|++|++....|...... ...+|++...+..
T Consensus 73 r~~nPt~~~le~~iaal~ga--~~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~- 149 (409)
T KOG0053|consen 73 RSGNPTRDVLESGIAALEGA--AHALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDV- 149 (409)
T ss_pred cCCCCchHHHHHHHHHHhCC--ceEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeech-
Confidence 34566678899999999985 3477778888899999999999999999999999754443 3457888888763
Q ss_pred CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEc
Q 014492 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR 279 (423)
Q Consensus 201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~ 279 (423)
-|++++++++. +++++|++.+|.||+..+.+++++.++|+. |++||+|+.++..... .++ ..+.+|++.
T Consensus 150 ----~~~~~~~~~i~-~~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p~~~-~pL----~lGADIV~h 219 (409)
T KOG0053|consen 150 ----DDLKKILKAIK-ENTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSPYNQ-DPL----PLGADIVVH 219 (409)
T ss_pred ----hhHHHHHHhhc-cCceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCccccc-Chh----hcCCCEEEE
Confidence 25788999997 589999999999999999999999999998 9999999999855321 122 234569999
Q ss_pred cChhhhcccC-ccccccccC-HHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCC
Q 014492 280 TFSKRAGLAG-LRVGYGAFP-LSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPF 355 (423)
Q Consensus 280 S~SK~~g~~G-~R~G~i~~~-~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 355 (423)
|.+|.+|--+ +=.|.++.+ +++.+++...... +.+++....- .+++-..+.-+.++..++...+.+.|++.+.
T Consensus 220 SaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~~~lg~~~~p~~~~l---l~Rglktl~lRi~~~~ena~~~A~~Le~~~~ 296 (409)
T KOG0053|consen 220 SATKYIGGHSDVIGGSVVLNSEELASRLKFLQEDLGWCEDPFDLFL---LSRGLKTLHLRINKHSENALKIALLLEAHPK 296 (409)
T ss_pred eeeeeecCCcceeeeEEecCcHHHHHHHHHHHHHhcCCCCHHHHHH---HhcCcchhhhhHHHHHHHHHHHHHHhhhCCc
Confidence 9999876322 334677775 7888887766543 5666665543 3344344555556666777777777776654
Q ss_pred Ce
Q 014492 356 LN 357 (423)
Q Consensus 356 ~~ 357 (423)
++
T Consensus 297 v~ 298 (409)
T KOG0053|consen 297 VK 298 (409)
T ss_pred ee
Confidence 43
No 307
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.68 E-value=6.3e-14 Score=140.03 Aligned_cols=321 Identities=14% Similarity=0.156 Sum_probs=194.7
Q ss_pred CCCCCCeeEcCCC-CCCCC-CCHHHHHHHhc-CC---CC-CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492 91 GRKPEDIVKIDAN-ENPYG-PPPEVREALGQ-LK---FP-YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (423)
Q Consensus 91 ~~~~~~~i~l~~~-~~~~~-~~~~v~~al~~-~~---~~-~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~ 163 (423)
..+++.+||+..+ ...++ .+|+|.+++.+ +. +. .+|+.+...+|.+.+++.++-..+.++++++++++++.++
T Consensus 68 D~dG~~ylD~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~Al 147 (459)
T PRK06082 68 DVDGKKYMDFHGNNVHQLGYGHPHVIEKVKEQMAKLPFSPRRFTNETAIECAEKLTEIAGGELNRVLFAPGGTSAIGMAL 147 (459)
T ss_pred ECCCCEEEEcccHhhcccCCCCHHHHHHHHHHHHhCCCccCccCCHHHHHHHHHHHHhCCCCCCEEEECCCcHHHHHHHH
Confidence 3457789998633 33355 67889888876 22 11 2345445668888888887633478999999999999998
Q ss_pred HHhc--CCCCeEEEcCCCchhhHHHHH-HCCC------------eEEEecCCCC----CC-CC------HHHHHHHhhc-
Q 014492 164 RCVL--DPGDKIVDCPPTFTMYEFDAA-VNGA------------AVVKVPRKSD----FS-LN------VELIADAVER- 216 (423)
Q Consensus 164 ~~l~--~~gd~Vl~~~p~y~~~~~~~~-~~g~------------~~~~v~~~~~----~~-~d------~~~l~~~i~~- 216 (423)
+... ....+|+....+|+.....+- ..|. .+..+|.... +. .| ++.+++.+.+
T Consensus 148 klAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~ 227 (459)
T PRK06082 148 KLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKE 227 (459)
T ss_pred HHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcC
Confidence 8432 223678888888875443222 2221 1222331111 10 11 3557777642
Q ss_pred CCceEEEEcCCCCCcCcCCC---HHHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEEEccChhhhcccC-
Q 014492 217 EKPKCIFLTSPNNPDGSIIN---DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAG- 289 (423)
Q Consensus 217 ~~~~~i~l~~p~NPtG~~~~---~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~g~~G- 289 (423)
.++.+|++...++..+.+.+ .+++.++|+. |+++|.||++..|...+.. ....+..+.+++ ++|.+| .|
T Consensus 228 ~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv~PDiv~---~gKgl~-gG~ 303 (459)
T PRK06082 228 GGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGIEPDILC---IGKGLG-GGL 303 (459)
T ss_pred CCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCCCCCEEE---eccccc-CCC
Confidence 35778888766665444566 3566667766 9999999999977543322 122222333333 799998 67
Q ss_pred ccccccccCHHHHHHHHH--hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc----CCCCeecCCCc
Q 014492 290 LRVGYGAFPLSIIEYLWR--AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKD----VPFLNPYPSYS 363 (423)
Q Consensus 290 ~R~G~i~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~p~~~ 363 (423)
+.+|.++.++++.+.... ....++.++++.+++.+.|+.-+- +...++.+++-++|.+.|++ .+.+.-..+.|
T Consensus 304 ~P~~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~-~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~G 382 (459)
T PRK06082 304 VPIAAMITKDKYNTAAQISLGHYTHEKSPLGCAAALATIEVIEQ-EGLLEKVKADSQFMRERLLEMKAKYPLIGDVRGIG 382 (459)
T ss_pred CcceEEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeecc
Confidence 589999988887644321 113567888888888877753110 12344445555555555543 45443345667
Q ss_pred eEEEEEeCCCC-----C---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014492 364 NFILCEVTSGM-----D---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM 420 (423)
Q Consensus 364 ~~~~~~~~~~~-----~---~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~ 420 (423)
.++.+++.... + ...+...+.++||++.+.. .+.+|++.. +.++.+++.++++
T Consensus 383 l~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~----~~~i~~~Ppl~it~~eid~~~~~l~ 446 (459)
T PRK06082 383 LLWGVELVTDRHTKERAYDEAEAVLYRCLNNGLSFKVSQ----GNVIQLSPPLIITREELTQALAILE 446 (459)
T ss_pred ceeEEEEccCccccCccHHHHHHHHHHHHhCCCEEEecC----CCEEEEeCCCccCHHHHHHHHHHHH
Confidence 77777774211 1 3456777789999998742 478999965 4445555555444
No 308
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.67 E-value=4.4e-14 Score=140.72 Aligned_cols=320 Identities=18% Similarity=0.184 Sum_probs=199.2
Q ss_pred CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CC---CCC--CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LK---FPY--IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (423)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~---~~~--~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~ 161 (423)
..+++.+||+..+. ..++ .+|++.+++.+ +. +.. .+..+...+|-+.+++...-..+.++++++++++++.
T Consensus 45 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~ 124 (445)
T PRK09221 45 DADGRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAPAFQMGHPLAFELAERLAELAPGGLDHVFFTNSGSESVDT 124 (445)
T ss_pred eCCCCEEEEccccHhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHH
Confidence 34577899997762 3344 46888888775 22 111 2334445567777877765334689999999999999
Q ss_pred HHHHhc------C-C-CCeEEEcCCCchhhHHHHHHC-C------------CeEEEecCCC-C----CCC--------CH
Q 014492 162 IMRCVL------D-P-GDKIVDCPPTFTMYEFDAAVN-G------------AAVVKVPRKS-D----FSL--------NV 207 (423)
Q Consensus 162 ~~~~l~------~-~-gd~Vl~~~p~y~~~~~~~~~~-g------------~~~~~v~~~~-~----~~~--------d~ 207 (423)
+++... . + ..+|+....+|++....+-.. | ..+..+|... . +.. ..
T Consensus 125 AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (445)
T PRK09221 125 ALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELA 204 (445)
T ss_pred HHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHH
Confidence 988432 1 1 257888888887544322111 1 1122233211 0 111 13
Q ss_pred HHHHHHhhc---CCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEE
Q 014492 208 ELIADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIV 277 (423)
Q Consensus 208 ~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~ 277 (423)
+++++.+.. .++.+|++...+...|.+.+ .+++.++|+. |+++|+||++..|...+.. ....+..+.
T Consensus 205 ~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv~PD--- 281 (445)
T PRK09221 205 DDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGVTPD--- 281 (445)
T ss_pred HHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCCCCC---
Confidence 566666642 45778888887888899888 7788888887 9999999999876532222 112222222
Q ss_pred EccChhhhcccC-ccccccccCHHHHHHHHH---------hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHH
Q 014492 278 LRTFSKRAGLAG-LRVGYGAFPLSIIEYLWR---------AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLF 347 (423)
Q Consensus 278 i~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~---------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~ 347 (423)
+.+++|.++ .| +.+|.+++++++.+.+.. ....|+.++++..++.+.|+.-+. +...++.+++.+++.
T Consensus 282 i~~~gK~l~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i~~-~~l~~~~~~~g~~l~ 359 (445)
T PRK09221 282 IITFAKGLT-NGAIPMGAVIASDEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYRE-EDLFERAAELAPYFE 359 (445)
T ss_pred EEEeccccc-cCcccceeeEEcHHHHHhhccCcccccccccccCCCcCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHH
Confidence 336789987 55 678999999998887642 112466788888877777753211 134556666667777
Q ss_pred HHHccC---CCCeecCCCceEEEEEeCC-----CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHH
Q 014492 348 KLLKDV---PFLNPYPSYSNFILCEVTS-----GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALM 416 (423)
Q Consensus 348 ~~L~~~---~~~~~~p~~~~~~~~~~~~-----~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~ 416 (423)
+.|+++ +.+.-..+.|.+..+++.. ......+.+.|.++||+++..+ +.+||+.. +.++++++.
T Consensus 360 ~~l~~l~~~~~v~~vrg~Gl~~~v~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~-----~~lr~~Ppl~~t~~eid~~~ 434 (445)
T PRK09221 360 DAVHSLKGLPHVIDIRNIGLVAGIELAPRPGAPGARGYEAFMKCFEKGLLVRYTG-----DTIALSPPLIIEKAQIDELV 434 (445)
T ss_pred HHHHhhccCCCEEEEecCceEEEEEEecccccccchHHHHHHHHHHCCeEEeecC-----CEEEEECCccCCHHHHHHHH
Confidence 766654 3222234456666666632 1124578888889999997643 57999965 444555555
Q ss_pred HHHh
Q 014492 417 ECLM 420 (423)
Q Consensus 417 ~al~ 420 (423)
++++
T Consensus 435 ~~l~ 438 (445)
T PRK09221 435 DALG 438 (445)
T ss_pred HHHH
Confidence 5544
No 309
>PRK07046 aminotransferase; Validated
Probab=99.67 E-value=2.2e-13 Score=135.83 Aligned_cols=313 Identities=15% Similarity=0.134 Sum_probs=192.1
Q ss_pred CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCCC--CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHH
Q 014492 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (423)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~--~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~ 164 (423)
..+++.+||+..+. ..++ .+|.+.+++.+ +..+ ..++.+...++.+.|++.++ .+.+.++++++|+...+++
T Consensus 71 D~DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~~~~~~~~~~~~~~lAe~l~~~~~--~~~v~F~nSGtEA~e~Alr 148 (453)
T PRK07046 71 DVDGHRYDDFCLGDTGAMFGHSPAPVARALAEQARRGLTTMLPSEDAAWVGEELARRFG--LPYWQVATTATDANRFVLR 148 (453)
T ss_pred eCCCCEEEEecccccccccCCCCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHhC--CCEEEEECCHHHHHHHHHH
Confidence 34577899987663 3344 36888888876 3322 23344445678888888775 5789999999999999988
Q ss_pred Hhc--CCCCeEEEcCCCchhhHHHHHH--CCCe-----------------EEEecCCCCCCCCHHHHHHHhhcCCceEEE
Q 014492 165 CVL--DPGDKIVDCPPTFTMYEFDAAV--NGAA-----------------VVKVPRKSDFSLNVELIADAVEREKPKCIF 223 (423)
Q Consensus 165 ~l~--~~gd~Vl~~~p~y~~~~~~~~~--~g~~-----------------~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~ 223 (423)
... ...++|+...-+|++....+-. .+.+ +..+| | -|++.+++.+...++.+|+
T Consensus 149 lAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----~-nd~~~l~~~l~~~~vAavi 223 (453)
T PRK07046 149 WARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVE----F-NDLAALEAALADGDVAAVL 223 (453)
T ss_pred HHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeC----C-CCHHHHHHHhCCCCeEEEE
Confidence 432 2237788888888765322111 0100 11111 1 2789999988656788888
Q ss_pred EcCCCCCcCcCCCH----HHHHHHHcC-CCEEEEccCCccccCCC-chhhhhccCCcEEEEccChhhhcccCcccccccc
Q 014492 224 LTSPNNPDGSIIND----EDLLKILEM-PILVVLDEAYTEFSGLE-SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF 297 (423)
Q Consensus 224 l~~p~NPtG~~~~~----~~l~~i~~~-~~~li~Deay~~~~~~~-~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~ 297 (423)
+...+...|.+.+. ++++++|+. |+++|.||++. |..+. ......+..+.++ +++|.+| .|+.+|.+++
T Consensus 224 ~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g~Gg~~~~~gv~PDi~---t~gK~lg-gG~Pi~av~g 298 (453)
T PRK07046 224 AEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSGPGGYTRAHGLEPDFL---VVGKPIA-GGVPCAVYGF 298 (453)
T ss_pred ECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-CccCCcchhHHhCCCccce---eehhhhc-CCCcceeeee
Confidence 88666556777663 667777876 99999999986 32111 1111122223333 4789998 7999999999
Q ss_pred CHHHHHHHHHh-----------cCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCc
Q 014492 298 PLSIIEYLWRA-----------KQPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYS 363 (423)
Q Consensus 298 ~~~~~~~l~~~-----------~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~ 363 (423)
++++.+.+... ...|+.++++..++.+.|+. ++..++..+.-...++.|.+.+++.+........|
T Consensus 299 ~~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~g~G 378 (453)
T PRK07046 299 SAELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMTEAAYAHMLALAARLAAGLRAVIARHGLPWHVTRVG 378 (453)
T ss_pred hHHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 99999887531 12467788888888877653 34444444444444555554444555332222333
Q ss_pred eEEEEEeCC-C-C---------C---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHh
Q 014492 364 NFILCEVTS-G-M---------D---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLM 420 (423)
Q Consensus 364 ~~~~~~~~~-~-~---------~---~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~ 420 (423)
..+.+.+.+ . . + ...+...|.++||++.+.. +.++++.. +.++++++.++++
T Consensus 379 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~-----~~~~~~p~~t~~did~~~~~~~ 445 (453)
T PRK07046 379 ARVEFQFAPTPPRNGAEAAAALDPELEAALHLYLLNRGVLITPFH-----NMMLVCPATTAADVDRLVAAFD 445 (453)
T ss_pred cEEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHHCCCEEeccc-----CcEEEeCCCCHHHHHHHHHHHH
Confidence 344444311 1 0 1 2345667778999998632 45788765 3444555444443
No 310
>PRK04311 selenocysteine synthase; Provisional
Probab=99.67 E-value=1.5e-13 Score=136.51 Aligned_cols=301 Identities=19% Similarity=0.151 Sum_probs=193.5
Q ss_pred CCHHHHHHHhcCCCCC---CC--C--Ccc--hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCC
Q 014492 109 PPPEVREALGQLKFPY---IY--P--DPE--SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179 (423)
Q Consensus 109 ~~~~v~~al~~~~~~~---~Y--~--~~g--~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~ 179 (423)
.++++.+++.+....+ .| . ..+ ...+++.+++++|.+ ..+++++++.++.+++.. +.+||+|+++...
T Consensus 98 l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~Gae--~a~vv~sgtaAl~l~l~~-l~~GdeVIvs~~e 174 (464)
T PRK04311 98 LSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALTGAE--DALVVNNNAAAVLLALNA-LAAGKEVIVSRGE 174 (464)
T ss_pred CCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHH-hCCCCEEEEcchh
Confidence 4678888887632111 11 1 112 468999999999964 466777777899888875 5789999998764
Q ss_pred chh------hHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCC--cC--cCCCHHHHHHHHcC-CC
Q 014492 180 FTM------YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNP--DG--SIINDEDLLKILEM-PI 248 (423)
Q Consensus 180 y~~------~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NP--tG--~~~~~~~l~~i~~~-~~ 248 (423)
+.. +....+..|++++.++.++ ..++++++++++ +++++|++++++|| +| ...+.+++.++++. |+
T Consensus 175 ~~~~ggs~~i~~~~~~~G~~l~~v~~~~--~t~~~dle~aI~-~~TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi 251 (464)
T PRK04311 175 LVEIGGAFRIPDVMRQAGARLVEVGTTN--RTHLRDYEQAIN-ENTALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGL 251 (464)
T ss_pred hhhcCcchhhHHHHHHCCcEEEEECCCC--CCCHHHHHHhcC-ccCeEEEEEcCCCccccccCCcCCHHHHHHHHHHcCC
Confidence 431 2335567899999998532 457999999997 68999999999998 34 67899999999997 99
Q ss_pred EEEEccCCcccc----CC---CchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHH--hcCCCCCcHHHH
Q 014492 249 LVVLDEAYTEFS----GL---ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR--AKQPYNVSVAAE 319 (423)
Q Consensus 249 ~li~Deay~~~~----~~---~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~--~~~~~~~~~~~~ 319 (423)
++|+|.+.+.+. ++ .......-..+..+++.|.+|.+|.+ ..|++++++++++++.+ ..+...+.....
T Consensus 252 ~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp--~~G~i~g~~~li~~l~~~~~~r~lr~dk~~l 329 (464)
T PRK04311 252 PVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGP--QAGIIVGKKELIARLKKHPLKRALRVDKLTL 329 (464)
T ss_pred eEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCC--ceEEEEEcHHHHHHHhhchhHHHHhcchHHH
Confidence 999999643321 10 11111112345679999999987633 58999999999987763 122232333333
Q ss_pred HHHHHHhC----C-hHH--------HHHHHHHHHHHHHHHHHHHccCC--CC--eecCC-----Cce-------EEEEEe
Q 014492 320 VAACAALQ----N-PIY--------LEKVKEALIKERERLFKLLKDVP--FL--NPYPS-----YSN-------FILCEV 370 (423)
Q Consensus 320 ~a~~~~l~----~-~~~--------~~~~~~~~~~~~~~l~~~L~~~~--~~--~~~p~-----~~~-------~~~~~~ 370 (423)
.+..+.|. . ..+ +....++++++.+.+.+.|++.. .. .+.+. +|. -..+.+
T Consensus 330 ~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~ 409 (464)
T PRK04311 330 AALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAVTL 409 (464)
T ss_pred HHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEccCccCCCCCcCCCCCeEEEEE
Confidence 33333332 1 111 23334667778888888887653 11 22221 111 112333
Q ss_pred -CCCCCHHHHHHHHHhC--CcEEEeCCCCCCCCeEEEEecC--hhhHHHHHHHHhhh
Q 014492 371 -TSGMDAKKLKDDLAKM--GVMIRHYNNKELKGYVRVSVGK--PEHTDALMECLMHL 422 (423)
Q Consensus 371 -~~~~~~~~l~~~L~~~--gI~v~~~~~~~~~~~iRis~~~--~~~~~~l~~al~~l 422 (423)
+++.+..++.+.|++. .|+.+- .++.+.+-+.+ +.+.+.+.++++.+
T Consensus 410 ~~~~~~~~~l~~~lr~~~~~i~~r~-----~~~~~~ld~r~~~~~~~~~~~~~~~~~ 461 (464)
T PRK04311 410 TPKDRSLEALAARLRLLPPPVIGRI-----EDGRLLLDLRTLEEEDEERLAAALLEA 461 (464)
T ss_pred eCCCCCHHHHHHHHhcCCCCEEEEE-----ECCEEEEEeCcCCHHHHHHHHHHHHHH
Confidence 2356889999999864 455542 24667777653 45667788877654
No 311
>PRK12403 putative aminotransferase; Provisional
Probab=99.67 E-value=1.5e-13 Score=137.48 Aligned_cols=321 Identities=15% Similarity=0.136 Sum_probs=191.7
Q ss_pred CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCC-C--CC---CCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHH
Q 014492 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF-P--YI---YPDPESRRLRAALAKDSGLESDHILVGCGADELID 160 (423)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~-~--~~---Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~ 160 (423)
...++.+||+..+. ..++ .+|+|.+|+.+ +.. . .. ++.+...+|.+.+++.++-..+.+++++++++|++
T Consensus 50 D~dG~~ylD~~~g~~~~~lGh~hp~v~~A~~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e 129 (460)
T PRK12403 50 DNDGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYYNMFFHTTHPAVIELSELLFSLLPGHYSHAIYTNSGSEANE 129 (460)
T ss_pred eCCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHH
Confidence 45677899986652 2243 46888888876 221 1 11 12233567888888887644478999999999999
Q ss_pred HHHHHhc-------CCCC-eEEEcCCCchhhHHHH-HHCCCe-----------EEEecCCCC----CCC--------CHH
Q 014492 161 LIMRCVL-------DPGD-KIVDCPPTFTMYEFDA-AVNGAA-----------VVKVPRKSD----FSL--------NVE 208 (423)
Q Consensus 161 ~~~~~l~-------~~gd-~Vl~~~p~y~~~~~~~-~~~g~~-----------~~~v~~~~~----~~~--------d~~ 208 (423)
.+++... ++++ .|+....+|+.....+ ...|.. +..+|.+.. +.. +.+
T Consensus 130 ~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 209 (460)
T PRK12403 130 VLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAAL 209 (460)
T ss_pred HHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHH
Confidence 9998653 2333 3555566776443222 222211 223331111 111 134
Q ss_pred HHHHHhhc---CCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCchh--hhhccCCcEEEE
Q 014492 209 LIADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVL 278 (423)
Q Consensus 209 ~l~~~i~~---~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~i 278 (423)
.+++.+.+ .++.+|++...+...|.+.+ .+++++||+. |+++|+||++..|...+... ...+..+.++
T Consensus 210 ~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv~PDiv-- 287 (460)
T PRK12403 210 QLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGFEPDTL-- 287 (460)
T ss_pred HHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCCCCCeE--
Confidence 56555531 45778888877777798887 7778888887 99999999998775433221 2222233333
Q ss_pred ccChhhhcccCc-cccccccCHHHHHHHHHh------cCCCCCcHHHHHHHHHHhCC---hHHHHHHH-HHHHHHHHHHH
Q 014492 279 RTFSKRAGLAGL-RVGYGAFPLSIIEYLWRA------KQPYNVSVAAEVAACAALQN---PIYLEKVK-EALIKERERLF 347 (423)
Q Consensus 279 ~S~SK~~g~~G~-R~G~i~~~~~~~~~l~~~------~~~~~~~~~~~~a~~~~l~~---~~~~~~~~-~~~~~~~~~l~ 347 (423)
+++|.+| .|+ .+|.+++++++.+.+... ...|+.++++.+++.+.|+. ++.+++.. +.-...++.|.
T Consensus 288 -~~gK~lg-gG~~Piga~v~~~~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~i~~~~l~~~~~~~~g~~l~~~L~ 365 (460)
T PRK12403 288 -SIAKGLT-SGYVPMGGLVLSKRIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLKALRDEGVVTRVKDDTGPYLQRCLR 365 (460)
T ss_pred -EEccccc-ccccceEEEEECHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 3799988 684 899888998888876431 23466888888888887753 22333332 33333344444
Q ss_pred HHHccCCCCeecCCCceEEEEEeCCC------CC-----HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHH
Q 014492 348 KLLKDVPFLNPYPSYSNFILCEVTSG------MD-----AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTD 413 (423)
Q Consensus 348 ~~L~~~~~~~~~p~~~~~~~~~~~~~------~~-----~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~ 413 (423)
+..++.+.+.-....|.++.+++... .. ...+...+.++||++.+.. +.+|++.. +.++.+
T Consensus 366 ~l~~~~~~i~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~-----~~~~l~Ppl~it~~eid 440 (460)
T PRK12403 366 EVFGDHPLVGEVQGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFEEGVIIRSTL-----GRMIMAPALVAGRAEID 440 (460)
T ss_pred HHHhcCCCEEeEeecceEEEEEEccCccccccccchhHHHHHHHHHHHhCCEEEEecC-----CEEEEECCCCCCHHHHH
Confidence 44444554443456777877777421 01 1234455678999998542 45889876 444555
Q ss_pred HHHHHHh
Q 014492 414 ALMECLM 420 (423)
Q Consensus 414 ~l~~al~ 420 (423)
++.++++
T Consensus 441 ~~~~~l~ 447 (460)
T PRK12403 441 ELVDKTR 447 (460)
T ss_pred HHHHHHH
Confidence 4444443
No 312
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.66 E-value=1.1e-13 Score=137.61 Aligned_cols=320 Identities=18% Similarity=0.187 Sum_probs=196.2
Q ss_pred CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CC---CCC--CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LK---FPY--IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (423)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~---~~~--~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~ 161 (423)
..+++.++|+..+. ..++ .+|++.+++.+ +. +.. .++.+...++-+.+++...-..+.++++++++++++.
T Consensus 42 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~ 121 (442)
T PRK13360 42 THDGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAPAFQMGHPKAFELANRIAEIAPGGLNHVFFTNSGSESVDT 121 (442)
T ss_pred eCCCCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHH
Confidence 34577899997663 3344 46888888875 22 111 2233334567777777764234689999999999999
Q ss_pred HHHHhcC-------C-CCeEEEcCCCchhhHHHHHH-CC------------CeEEEecCCCC-----CCC--------CH
Q 014492 162 IMRCVLD-------P-GDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKSD-----FSL--------NV 207 (423)
Q Consensus 162 ~~~~l~~-------~-gd~Vl~~~p~y~~~~~~~~~-~g------------~~~~~v~~~~~-----~~~--------d~ 207 (423)
+++.... + ..+|+....+|++....+-. .| ..+..+|.... +.. .+
T Consensus 122 AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 201 (442)
T PRK13360 122 ALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELA 201 (442)
T ss_pred HHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHH
Confidence 9884321 2 25799888888765432211 11 11233332110 111 14
Q ss_pred HHHHHHhhc---CCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEE
Q 014492 208 ELIADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIV 277 (423)
Q Consensus 208 ~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~ 277 (423)
+.+++.+.. .++.+|++...+...|.+.+ .++++++|+. |+++|+||++..|...+.. ....+..+.
T Consensus 202 ~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PD--- 278 (442)
T PRK13360 202 DELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVTPD--- 278 (442)
T ss_pred HHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCc---
Confidence 567777742 45678888877888899888 7788888886 9999999999776432222 112222222
Q ss_pred EccChhhhcccC-ccccccccCHHHHHHHHHh---------cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHH
Q 014492 278 LRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA---------KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLF 347 (423)
Q Consensus 278 i~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~~---------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~ 347 (423)
+.+++|.++ .| +.+|.+++++++.+.+... ...|+.++++..++.++|+.-+- +...++.+++-+++.
T Consensus 279 ivt~gK~l~-gG~~P~gav~~~~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~-~~l~~~~~~~g~~l~ 356 (442)
T PRK13360 279 LLTCAKGLT-NGAIPMGAVFVSSEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYER-EGLLTRAARLAPYWE 356 (442)
T ss_pred eeeeeeccc-cCccceEEEEEcHHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHH
Confidence 236799987 56 7899999999988776431 12467788888888887753111 134455556666666
Q ss_pred HHHccC---CCCeecCCCceEEEEEeCC---C--CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHH
Q 014492 348 KLLKDV---PFLNPYPSYSNFILCEVTS---G--MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALM 416 (423)
Q Consensus 348 ~~L~~~---~~~~~~p~~~~~~~~~~~~---~--~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~ 416 (423)
+.|+++ +.+.-..+.|.+..+.+.. + .....+.+.|.++||++.... +.+||+.. +.++.+++.
T Consensus 357 ~~l~~l~~~~~v~~vrG~Gl~~~~~l~~~~~~~~~~~~~~~~~l~~~Gvl~~~~~-----~~lr~~Ppl~~t~~eid~~~ 431 (442)
T PRK13360 357 DALHSLRDAPHVIDIRNLGLVGAVELAPRDGKPGKRAYEVFLKCFEKGLMIRYTG-----DILALSPPLIIEEAQIDELF 431 (442)
T ss_pred HHHHHhhcCCCeeeeeccceEEEEEEecCCCCcchhHHHHHHHHHHCCcEEEecC-----CEEEEeCCCccCHHHHHHHH
Confidence 666543 2222223445555555531 1 124577888889999997643 57999965 344455555
Q ss_pred HHHh
Q 014492 417 ECLM 420 (423)
Q Consensus 417 ~al~ 420 (423)
++++
T Consensus 432 ~~l~ 435 (442)
T PRK13360 432 DILA 435 (442)
T ss_pred HHHH
Confidence 5443
No 313
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.66 E-value=2e-13 Score=135.07 Aligned_cols=319 Identities=12% Similarity=0.141 Sum_probs=194.6
Q ss_pred CCCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-CC---CCC--CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492 91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LK---FPY--IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (423)
Q Consensus 91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~---~~~--~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~ 161 (423)
..+++.++|+..+ ...++ .+|++.+++.+ +. +.. .+..+...+|.+.+++..+-..+.++++++++++++.
T Consensus 36 D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~ 115 (422)
T PRK05630 36 LEDGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSHVMFGGLTHEPAIKLTRKLLNLTDNGLDHVFYSDSGSVSVEV 115 (422)
T ss_pred ECCCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHH
Confidence 3567889999776 33344 36888888876 22 111 1233335578888887764334689999999999999
Q ss_pred HHHHhcC-------CC-CeEEEcCCCchhhHHHHHH-CCC-------------eEEEecCCCCCCCC-------HHHHHH
Q 014492 162 IMRCVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKSDFSLN-------VELIAD 212 (423)
Q Consensus 162 ~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~-~g~-------------~~~~v~~~~~~~~d-------~~~l~~ 212 (423)
+++.... ++ .+|+....+|+.....+-. .+. ....+|.......+ .+.+++
T Consensus 116 AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 195 (422)
T PRK05630 116 AIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISEYLRSLEL 195 (422)
T ss_pred HHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCCChHHHHHHHHHHHH
Confidence 9884321 23 5788888888754333221 111 12333322111112 234455
Q ss_pred HhhcCCceEEEEcCC-CCCcCcCC-CHHHH---HHHHcC-CCEEEEccCCccccCCCchh--hhhccCCcEEEEccChhh
Q 014492 213 AVEREKPKCIFLTSP-NNPDGSII-NDEDL---LKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKR 284 (423)
Q Consensus 213 ~i~~~~~~~i~l~~p-~NPtG~~~-~~~~l---~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~i~S~SK~ 284 (423)
.+. .++.+|++... +.-.|.+. +.+.+ .++|+. |+++|+||++..|...+... ...+..+.++ +++|.
T Consensus 196 ~~~-~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDi~---t~gK~ 271 (422)
T PRK05630 196 LID-ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFATLAAGVTPDIM---CVGKA 271 (422)
T ss_pred HHh-hceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhHHHhcCCCCCee---eeech
Confidence 554 57888888863 66678755 44444 455655 99999999998775333221 1122223333 67998
Q ss_pred hcccC-ccccccccCHHHHHHHHHh--------cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc---
Q 014492 285 AGLAG-LRVGYGAFPLSIIEYLWRA--------KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKD--- 352 (423)
Q Consensus 285 ~g~~G-~R~G~i~~~~~~~~~l~~~--------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~--- 352 (423)
++ .| ..+|++++++++.+.+... ..+|..++++..++.++|+.-+- +...++++++-+++.+.|++
T Consensus 272 l~-gG~~p~~av~~~~~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~-~~~~~~~~~~g~~l~~~L~~l~~ 349 (422)
T PRK05630 272 LT-GGFMSFAATLCTDKVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIET-GMWRKQVKRIEAELIAGLSPLAH 349 (422)
T ss_pred hh-cCccccceeeccHHHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHhhc
Confidence 86 57 4789999999998877531 24577888888888877754110 12233444444555554443
Q ss_pred CCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014492 353 VPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM 420 (423)
Q Consensus 353 ~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~ 420 (423)
.+.+.-....|.++.+++.+..++..+.+.++++||++.+.+ +.+||... +.++.+++.++++
T Consensus 350 ~~~v~~vRg~Gl~~~ie~~~~~~~~~~~~~~~~~Gl~~~~~g-----~~l~~~PpL~it~~~i~~~~~~l~ 415 (422)
T PRK05630 350 LPGVADVRVLGAIGVVEMEQPVDMEEATQAAVDHGVWLRPFG-----RLVYVMPPYITTSEQIAQICAALA 415 (422)
T ss_pred CCCeeeeeccccEEEEEECCcccHHHHHHHHHHCCeEEEecC-----CEEEEECCccCCHHHHHHHHHHHH
Confidence 333332345688888888644456788888999999997642 68999975 4444444444443
No 314
>PRK05965 hypothetical protein; Provisional
Probab=99.66 E-value=1.5e-13 Score=137.54 Aligned_cols=320 Identities=15% Similarity=0.141 Sum_probs=194.3
Q ss_pred CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCC---CC---CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHH
Q 014492 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF---PY---IYPDPESRRLRAALAKDSGLESDHILVGCGADELID 160 (423)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~---~~---~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~ 160 (423)
..+++.+||+..+. ..++ .+|++.+|+.+ +.. .. .++.+...+|-+.|++...-..+.++++++++++++
T Consensus 42 D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGSEAve 121 (459)
T PRK05965 42 DASGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYATGYFHFGSEPAIRLAAKLAERAPGSLNHVYFTLGGSDAVD 121 (459)
T ss_pred ECCCCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCChhHHHH
Confidence 35677899997663 3333 36888888876 221 11 233333456777887776434568999999999999
Q ss_pred HHHHHhc------C-C-CCeEEEcCCCchhhHHHHHH-C---------CC---eEEEecCCCC----CCCC--------H
Q 014492 161 LIMRCVL------D-P-GDKIVDCPPTFTMYEFDAAV-N---------GA---AVVKVPRKSD----FSLN--------V 207 (423)
Q Consensus 161 ~~~~~l~------~-~-gd~Vl~~~p~y~~~~~~~~~-~---------g~---~~~~v~~~~~----~~~d--------~ 207 (423)
.+++... + + ..+|+....+|++....+.. . |. .+..+|.+.. +.-| +
T Consensus 122 ~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (459)
T PRK05965 122 SAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASV 201 (459)
T ss_pred HHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHH
Confidence 9998532 1 2 25788888888755432211 1 10 1223332110 1123 2
Q ss_pred HHHHHHhhc---CCceEEEEcCCCCCcCcCC-CHHHH---HHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEE
Q 014492 208 ELIADAVER---EKPKCIFLTSPNNPDGSII-NDEDL---LKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIV 277 (423)
Q Consensus 208 ~~l~~~i~~---~~~~~i~l~~p~NPtG~~~-~~~~l---~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~ 277 (423)
+.+++.+.+ +++.+|++...+...|.+. +.+-+ +++|+. |+++|.||++..|...+.. ....+..+.+++
T Consensus 202 ~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~ 281 (459)
T PRK05965 202 AALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFACEAEGVVPDLMT 281 (459)
T ss_pred HHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCCCCCeEE
Confidence 567777752 4678888887777778765 44444 445555 9999999999988543322 112222333343
Q ss_pred EccChhhhcccC-ccccccccCHHHHHHHHH---------hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHH
Q 014492 278 LRTFSKRAGLAG-LRVGYGAFPLSIIEYLWR---------AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLF 347 (423)
Q Consensus 278 i~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~---------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~ 347 (423)
++|.++ .| +.+|.+++++++.+.+.. ....|+.++++.+++.+.|+--+ -+...++.++.-+++.
T Consensus 282 ---~gKgl~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~-~~~l~~~~~~~g~~l~ 356 (459)
T PRK05965 282 ---VAKGLT-SGYVPMGAVLMSDHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYH-EGGLLANGQKAGPRFA 356 (459)
T ss_pred ---echhhc-cCCcceeEEEEcHHHHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 589998 78 599999999999887642 12346788898888887775311 1123344444555555
Q ss_pred HHHcc---CCCCeecCCCceEEEEEeCCCC-----------CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---Chh
Q 014492 348 KLLKD---VPFLNPYPSYSNFILCEVTSGM-----------DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPE 410 (423)
Q Consensus 348 ~~L~~---~~~~~~~p~~~~~~~~~~~~~~-----------~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~ 410 (423)
+.|++ .+.+.-..+.|.++.+++.+.. -...+.+.+.++||++.+.+ .+.||+... +++
T Consensus 357 ~~l~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~~g----~~~i~~~PpL~it~~ 432 (459)
T PRK05965 357 AGLDALRAHPLVGDVRGRGLLGALELVADKATKTPFDAALDPADRIFDRAYANGLVFRAFG----DGVLGFAPALCCTEG 432 (459)
T ss_pred HHHHhhccCCCEEEEeecceEEEEEEeccccccCCCCchhHHHHHHHHHHHhCCeEEEecC----CcEEEEECCCcCCHH
Confidence 55544 4433334566777777773211 13457777889999998643 467999854 344
Q ss_pred hHHHHHHHH
Q 014492 411 HTDALMECL 419 (423)
Q Consensus 411 ~~~~l~~al 419 (423)
+.+++.+++
T Consensus 433 ei~~~~~~l 441 (459)
T PRK05965 433 EFDLIFERT 441 (459)
T ss_pred HHHHHHHHH
Confidence 444444444
No 315
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.65 E-value=1.9e-13 Score=120.64 Aligned_cols=302 Identities=19% Similarity=0.207 Sum_probs=207.4
Q ss_pred CHHHHHHHhcCCCCC---CC---------CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcC
Q 014492 110 PPEVREALGQLKFPY---IY---------PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCP 177 (423)
Q Consensus 110 ~~~v~~al~~~~~~~---~Y---------~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~ 177 (423)
+++.++|+-+...++ .| .-|-...+.+.+++++|. |.+-+|+|+.++=..++.+++++||.|++..
T Consensus 30 t~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFlg~--D~~R~t~GARe~KfavMhal~~~gd~vV~D~ 107 (382)
T COG1103 30 TEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFLGM--DEVRVTAGAREAKFAVMHALCKEGDWVVVDS 107 (382)
T ss_pred CHHHHHHHHHhcCCcchhhhhccCccccccCCcHHHHHHHHHHHhCC--ceeeecccchhhHHHHHHHhccCCCEEEEcC
Confidence 577778877642211 01 112245677889999996 5688999999999999999999999999999
Q ss_pred CCchhhHHHHHHCCCeEEEecC--CCCCCCCHHHHHHHhhc------CCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CC
Q 014492 178 PTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER------EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PI 248 (423)
Q Consensus 178 p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~------~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~ 248 (423)
.+|....-+++.+|.++..||. -+++.++++...+.|++ ..+.+.++++|..--|.+.+...+.+||+. ++
T Consensus 108 ~aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gv 187 (382)
T COG1103 108 LAHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGV 187 (382)
T ss_pred cchHHHHHHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCC
Confidence 9987666778889999999993 25678899887777643 247888889999999999999999999998 99
Q ss_pred EEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC-C--------CCcHHHH
Q 014492 249 LVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP-Y--------NVSVAAE 319 (423)
Q Consensus 249 ~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~-~--------~~~~~~~ 319 (423)
+++...+|..... .-.....+..++++|-+|++. +.-.+|.+....++.+.+.+.... | ++..-..
T Consensus 188 PlllN~AYt~Grm----pvs~ke~g~DFiVgSGHKsmA-As~PiGvl~~~eE~ae~V~r~Sg~~~~~KEvellGCT~rGa 262 (382)
T COG1103 188 PLLLNCAYTVGRM----PVSGKEIGADFIVGSGHKSMA-ASAPIGVLAMSEEWAEIVLRRSGRAFPKKEVELLGCTVRGA 262 (382)
T ss_pred ceEeecceeeccc----cccccccCCCEEEecCccchh-ccCCeeEEeehhHHHHHHHhhcccccccceeeeecccccCc
Confidence 9999999984332 111123345689999999997 556799999999998888766521 2 2221111
Q ss_pred HHHHHHhCChHHHHHHHHH---HHHHHHHHHHHHccCCCCe---ecCCCceEEEEEeCC--------CCCHHHHHHHHHh
Q 014492 320 VAACAALQNPIYLEKVKEA---LIKERERLFKLLKDVPFLN---PYPSYSNFILCEVTS--------GMDAKKLKDDLAK 385 (423)
Q Consensus 320 ~a~~~~l~~~~~~~~~~~~---~~~~~~~l~~~L~~~~~~~---~~p~~~~~~~~~~~~--------~~~~~~l~~~L~~ 385 (423)
- ...++.+-.++.++.++ --+..+++.+.|++++++. ..|.....+.+..|. ....--+++.|++
T Consensus 263 p-ivTlmASfP~V~eRVkrWdeEv~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp~f~eIakk~~r~gyFlY~ELK~ 341 (382)
T COG1103 263 P-IVTLMASFPHVVERVKRWDEEVEKARWFVAELEKIGGVKQLGERPKNHDLMKFETPVFHEIAKKHKRKGYFLYEELKK 341 (382)
T ss_pred h-HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhCCCCcccceeeecCchHHHHHHhCcCCceeeHHHHHh
Confidence 1 11112222222222222 2345677888999887554 246666566666651 1122346777887
Q ss_pred CCcEEEeCCCCCCCCeEEEEe-c-ChhhHHHHHHHHhhh
Q 014492 386 MGVMIRHYNNKELKGYVRVSV-G-KPEHTDALMECLMHL 422 (423)
Q Consensus 386 ~gI~v~~~~~~~~~~~iRis~-~-~~~~~~~l~~al~~l 422 (423)
+||.-. .++...++.+|+ + +.++.+.+.++++.|
T Consensus 342 RgI~GI---~~G~Tk~~K~svyGl~~Eqve~V~~afkeI 377 (382)
T COG1103 342 RGIHGI---QPGQTKYFKLSVYGLSWEQVEYVVDAFKEI 377 (382)
T ss_pred cCcccc---ccCceeEEEEEeecCCHHHHHHHHHHHHHH
Confidence 776422 133467899985 4 456678888887765
No 316
>PRK06148 hypothetical protein; Provisional
Probab=99.65 E-value=8.5e-14 Score=151.05 Aligned_cols=323 Identities=14% Similarity=0.071 Sum_probs=197.3
Q ss_pred CCCCCeeEcCCCCCCCC-CCHHHHHHHhc-CC---CCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh
Q 014492 92 RKPEDIVKIDANENPYG-PPPEVREALGQ-LK---FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV 166 (423)
Q Consensus 92 ~~~~~~i~l~~~~~~~~-~~~~v~~al~~-~~---~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l 166 (423)
..++.++|+..+...+| .+|+|.+|+.+ +. ....|..+...++-+.+++.+.-..+.++++++++||++.+++..
T Consensus 621 ~dG~~ylD~~~g~~~lGH~hp~v~~Ai~~q~~~l~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~nSGsEA~e~AlklA 700 (1013)
T PRK06148 621 NRGRAYLDCFNNVCHVGHAHPRVVAAAARQAARLNTNTRYLHDAIVAYAERLTATLPDGLTVAFFVNSGSEANSLALRLA 700 (1013)
T ss_pred CCCCEEEEcccChhhcCCCCHHHHHHHHHHHhhcCCcCCcCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHH
Confidence 45788999988766665 36888888876 22 223455555667888888877533468999999999999999843
Q ss_pred c--CCCCeEEEcCCCchhhHHHHHH-C--------C----CeEEEecCCC----CCCC-C-------HHHHHHHhh----
Q 014492 167 L--DPGDKIVDCPPTFTMYEFDAAV-N--------G----AAVVKVPRKS----DFSL-N-------VELIADAVE---- 215 (423)
Q Consensus 167 ~--~~gd~Vl~~~p~y~~~~~~~~~-~--------g----~~~~~v~~~~----~~~~-d-------~~~l~~~i~---- 215 (423)
. ....+|+....+|++....+.. . + ..+..++..+ .+.. | .+.+++.+.
T Consensus 701 r~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~ 780 (1013)
T PRK06148 701 RAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAA 780 (1013)
T ss_pred HHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhc
Confidence 2 1236788888888644322111 1 1 1121222111 1111 1 134554442
Q ss_pred -cCCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCc-h--hhhhccCCcEEEEccChhhhc
Q 014492 216 -REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLES-R--MEWVKKHDNLIVLRTFSKRAG 286 (423)
Q Consensus 216 -~~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~-~--~~~~~~~~~~i~i~S~SK~~g 286 (423)
..++.+|++.....-.|.+.+ .+++.++|+. |+++|.||++..|...+. . ....+..+.+ -+++|.+|
T Consensus 781 ~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDi---vt~gK~lg 857 (1013)
T PRK06148 781 KGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDI---VTMGKPIG 857 (1013)
T ss_pred cCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCcce---eeeccccc
Confidence 145788888866666677665 4445556665 999999999988854332 1 1112222333 34689998
Q ss_pred ccCccccccccCHHHHHHHHH---hcCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeecC
Q 014492 287 LAGLRVGYGAFPLSIIEYLWR---AKQPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPYP 360 (423)
Q Consensus 287 ~~G~R~G~i~~~~~~~~~l~~---~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p 360 (423)
.|+.+|.+++.+++.+.+.. ....|+.++++.+++.+.|+. ++..++..+.-...++.|.+..++.+.+.-..
T Consensus 858 -gG~Plgav~~~~ei~~~~~~g~~~~~Tf~gnpla~aaa~a~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~Vr 936 (1013)
T PRK06148 858 -NGHPMGAVVTTREIADSFDNGMEYFNTFGGNPVSCAIGLAVLDIIEDEDLQRNALEIGNYLLAGLRELQDRFDIIGDVR 936 (1013)
T ss_pred -CCcceEEEEEcHHHHhhccCCCccccCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCceEEe
Confidence 79999999999999887643 224567889988888887753 22333333333333333433333455444345
Q ss_pred CCceEEEEEeCCCC--------CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC---hhhHHHHHHHHh
Q 014492 361 SYSNFILCEVTSGM--------DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK---PEHTDALMECLM 420 (423)
Q Consensus 361 ~~~~~~~~~~~~~~--------~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~---~~~~~~l~~al~ 420 (423)
+.|.++.+++.... ....+.+.|+++||++.+.+. ..+.+||.... .++.+++.++++
T Consensus 937 G~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g~--~~~vlr~~Ppl~it~~~id~~l~~l~ 1005 (1013)
T PRK06148 937 GMGLFLGIELVTDRKTKAPATAIARYVKNGARERGILIGTEGP--HDNVLKIRPPLIFSRADADHLLEVLD 1005 (1013)
T ss_pred eeceEEEEEecCCccccCccHHHHHHHHHHHHhCCeEEeccCC--CCCEEEEeCCccCCHHHHHHHHHHHH
Confidence 67888888774211 134577888899999986532 24789998763 444444444443
No 317
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.65 E-value=2.8e-13 Score=134.23 Aligned_cols=321 Identities=13% Similarity=0.145 Sum_probs=197.2
Q ss_pred CCCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-CC---CCC--CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492 91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LK---FPY--IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (423)
Q Consensus 91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~---~~~--~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~ 161 (423)
..+++.++|+..+ ...++ .+|++.+++.+ +. +.. .|..+...+|-+.+++...-..+.++++++++++++.
T Consensus 40 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~ 119 (429)
T PRK06173 40 LKDGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSHIMFGGFTHEPAVELAQKLLEILPPSLNKIFFADSGSVAVEV 119 (429)
T ss_pred cCCCCEEEEccchHHhccCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCCchHHHHH
Confidence 3457789999765 23333 36888888776 22 111 2344445677888887765345789999999999999
Q ss_pred HHHHhcC-------CC-CeEEEcCCCchhhHHHHHH-CCC-------------eEEEecCCCC-C-----CCCHHHHHHH
Q 014492 162 IMRCVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKSD-F-----SLNVELIADA 213 (423)
Q Consensus 162 ~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~-~g~-------------~~~~v~~~~~-~-----~~d~~~l~~~ 213 (423)
+++.... +| .+|+....+|++....+.. .|. .+..+|.+.. + .-+++.+++.
T Consensus 120 AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~ 199 (429)
T PRK06173 120 AMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDL 199 (429)
T ss_pred HHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHH
Confidence 9885431 33 5788888888764322211 110 1222332111 1 0136667777
Q ss_pred hhc--CCceEEEEcCC-CCCcCcC-CCHHHHHHH---HcC-CCEEEEccCCccccCCCch--hhhhccCCcEEEEccChh
Q 014492 214 VER--EKPKCIFLTSP-NNPDGSI-INDEDLLKI---LEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSK 283 (423)
Q Consensus 214 i~~--~~~~~i~l~~p-~NPtG~~-~~~~~l~~i---~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S~SK 283 (423)
+.. .++.+|++... +.-.|.+ .+.+.++++ |+. |+++|+||++..|...+.. ....+..+. ++ +++|
T Consensus 200 i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PD-iv--~~gK 276 (429)
T PRK06173 200 LEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFALEHAGVVPD-IM--CIGK 276 (429)
T ss_pred HHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcchHHHhcCCCCC-EE--Eeeh
Confidence 742 46788888863 6767876 466555555 444 9999999999776433322 122222233 33 3899
Q ss_pred hhcccC-ccccccccCHHHHHHHHH-------hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccC--
Q 014492 284 RAGLAG-LRVGYGAFPLSIIEYLWR-------AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDV-- 353 (423)
Q Consensus 284 ~~g~~G-~R~G~i~~~~~~~~~l~~-------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-- 353 (423)
.++ .| +.++.++.++++.+.+.. ...+|..++++.+++.++|+.-+- +...++++++-++|.+.|+++
T Consensus 277 ~l~-gG~~p~~a~~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~~-~~~~~~~~~~g~~l~~~L~~~~~ 354 (429)
T PRK06173 277 ALT-GGYLTLSATITTEAIAQTICSGEAKCFMHGPTFMANPLACAIAAESIRLLLE-SPWQQNIQRIEAQLKQELAPAAE 354 (429)
T ss_pred hhh-CCccccceEEecHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHhhc
Confidence 997 67 478888889998887742 122456788888888887753110 123555666666666666543
Q ss_pred -CCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014492 354 -PFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH 421 (423)
Q Consensus 354 -~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~ 421 (423)
+.+.-....|.++.+.+.+..+...+.+.|.++||++.+.+ +.|||.....-+.+++.++++.
T Consensus 355 ~~~v~~vRg~Gl~~~iel~~~~~~~~i~~~l~e~Gi~v~~~g-----~~l~~~Ppl~it~~ei~~~~~~ 418 (429)
T PRK06173 355 FDSVAEVRVLGAIGVVEMKEPVNMATLQPRFVEHGIWVRPFG-----KLVYIMPPFIISPDELSQLTSG 418 (429)
T ss_pred CCCeeeeeccceEEEEEeCCcccHHHHHHHHHHCCeEEEecC-----CEEEEeCCccCCHHHHHHHHHH
Confidence 22221235677887888654556788999999999998753 5899997632223444444443
No 318
>PRK07483 hypothetical protein; Provisional
Probab=99.65 E-value=3.1e-13 Score=134.60 Aligned_cols=325 Identities=14% Similarity=0.168 Sum_probs=192.5
Q ss_pred CCCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-CCCC-----CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492 91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFP-----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (423)
Q Consensus 91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~-----~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~ 161 (423)
+.+++.+||+..+ ...++ .+|.+.+++.+ +... ..|..+...+|.+.|++...-..+.++++++++++++.
T Consensus 26 D~dG~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~ 105 (443)
T PRK07483 26 DATGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAYAHTSFFTTEPAEALADRLVAAAPAGLEHVYFVSGGSEAVEA 105 (443)
T ss_pred eCCCCEEEEcCccHhhhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCEEEEcCCcHHHHHH
Confidence 4567889999876 34444 46888888876 2211 11333344567777777664334689999999999999
Q ss_pred HHHHhcC-------CC-CeEEEcCCCchhhHHHHHH-CCC------------eEEEecCCCCCCC-----C--------H
Q 014492 162 IMRCVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDFSL-----N--------V 207 (423)
Q Consensus 162 ~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~~~-----d--------~ 207 (423)
+++.... +| .+|+...-+|+.....+.. .|- .+..++....+.. + +
T Consensus 106 AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (443)
T PRK07483 106 ALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAYGQRLA 185 (443)
T ss_pred HHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHHHHHHHH
Confidence 9884321 33 5688888888754332221 110 1122321111110 0 2
Q ss_pred HHHHHHhh---cCCceEEEEcCCCC-CcCcCCC-HH---HHHHHHcC-CCEEEEccCCccccCCCchhh--hhccCCcEE
Q 014492 208 ELIADAVE---REKPKCIFLTSPNN-PDGSIIN-DE---DLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLI 276 (423)
Q Consensus 208 ~~l~~~i~---~~~~~~i~l~~p~N-PtG~~~~-~~---~l~~i~~~-~~~li~Deay~~~~~~~~~~~--~~~~~~~~i 276 (423)
+.+++.+. ..++.+|++...+. -.|.+.+ .+ .++++|+. |+++|.||++..|...+.... ..+..+.++
T Consensus 186 ~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv 265 (443)
T PRK07483 186 DELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGVAPDLV 265 (443)
T ss_pred HHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCCCCCee
Confidence 56666553 24677888876553 3465554 44 45556665 999999999998854332221 222233333
Q ss_pred EEccChhhhcccCc-cccccccCHHHHHHHHHh------cCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHH
Q 014492 277 VLRTFSKRAGLAGL-RVGYGAFPLSIIEYLWRA------KQPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERL 346 (423)
Q Consensus 277 ~i~S~SK~~g~~G~-R~G~i~~~~~~~~~l~~~------~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l 346 (423)
+++|.++ .|+ .+|.+++++++.+.+... ...|+.++++..++.+.|+- ++.+++..+.-...++.|
T Consensus 266 ---~~gK~l~-gG~~Pi~av~~~~~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~~~l~~~~~~~g~~l~~~L 341 (443)
T PRK07483 266 ---TIAKGLG-AGYQPIGAVLASDRIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAEDGLLANVRARGEQLRARL 341 (443)
T ss_pred ---eehhhhc-cCccccEEEEEcHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 3589997 785 999999999998877532 23467788888888877753 333344444334444444
Q ss_pred HHHHccCCCCeecCCCceEEEEEeCCCC-----------CHHHHHHHHHhCCcEEEeCCC---CCCCCeEEEEec---Ch
Q 014492 347 FKLLKDVPFLNPYPSYSNFILCEVTSGM-----------DAKKLKDDLAKMGVMIRHYNN---KELKGYVRVSVG---KP 409 (423)
Q Consensus 347 ~~~L~~~~~~~~~p~~~~~~~~~~~~~~-----------~~~~l~~~L~~~gI~v~~~~~---~~~~~~iRis~~---~~ 409 (423)
.+.+++.+.+.-....|.++.+++.+.. ....+.+.+.++||++.+... ....+.+||... +.
T Consensus 342 ~~l~~~~~~i~~vRG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~~~~~~~~~l~~~PpL~it~ 421 (443)
T PRK07483 342 RERLGQHPHVGDIRGRGLFVGVELVADRATKAPFDPALKLHARIKREAMARGLMVYPMGGTIDGVRGDHVLLAPPFIITA 421 (443)
T ss_pred HHHHhcCCCeeeEeecccEEEEEEeecccccCCCCchhhHHHHHHHHHHHCCcEEEecCccccCCCCCEEEEECCCCCCH
Confidence 4444445544334567777777763210 135677888899999987532 112468999875 34
Q ss_pred hhHHHHHHHH
Q 014492 410 EHTDALMECL 419 (423)
Q Consensus 410 ~~~~~l~~al 419 (423)
++.+++.+++
T Consensus 422 ~eid~~~~~l 431 (443)
T PRK07483 422 AQIDEIVERL 431 (443)
T ss_pred HHHHHHHHHH
Confidence 4444444443
No 319
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.65 E-value=5e-13 Score=133.38 Aligned_cols=324 Identities=16% Similarity=0.194 Sum_probs=193.2
Q ss_pred CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCC---C-CCC-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF---P-YIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (423)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~---~-~~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~ 161 (423)
+.+++.+||+..+. ..++ .+|++.+++.+ +.. . ..| +.+...+|-+.+++..+...+.+++++++++|++.
T Consensus 49 D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEA~e~ 128 (457)
T PRK05639 49 DVDGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQHSMIGYTHSERAIRVAEKLAEISPIENPKVLFGLSGSDAVDM 128 (457)
T ss_pred eCCCCEEEECCcCHHhhccCCCCHHHHHHHHHHHHhccccccCccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHH
Confidence 45678899998773 3344 46888888876 221 1 122 23334568888888765444689999999999999
Q ss_pred HHHHhc--CCCCeEEEcCCCchhhHHHHHH-CCC-------------eEEEecCCCCCC--------CCH--------HH
Q 014492 162 IMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKSDFS--------LNV--------EL 209 (423)
Q Consensus 162 ~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g~-------------~~~~v~~~~~~~--------~d~--------~~ 209 (423)
+++... ....+|+....+|++....+.. .|. .++.+|.++.+. .|. +.
T Consensus 129 AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (457)
T PRK05639 129 AIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDY 208 (457)
T ss_pred HHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHHH
Confidence 988432 2336788888888754433222 111 133444221111 122 23
Q ss_pred HHHHh-----hcCCceEEEEcCCCCCcCcCCC-HHHHHH---HHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEE
Q 014492 210 IADAV-----EREKPKCIFLTSPNNPDGSIIN-DEDLLK---ILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIV 277 (423)
Q Consensus 210 l~~~i-----~~~~~~~i~l~~p~NPtG~~~~-~~~l~~---i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~ 277 (423)
+++.+ ...++.+|++...+...|.+.+ .+.+++ +|+. |+++|+||++..|...+.. ....+..+.+++
T Consensus 209 le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~ 288 (457)
T PRK05639 209 LENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFASEWFEVKPDLII 288 (457)
T ss_pred HHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHHHHhcCCCCCEEE
Confidence 44443 1356888998876766787664 544544 4554 9999999999877533322 112222333333
Q ss_pred EccChhhhcccCccccccccCHHHHHHHHH-hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc----
Q 014492 278 LRTFSKRAGLAGLRVGYGAFPLSIIEYLWR-AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKD---- 352 (423)
Q Consensus 278 i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~---- 352 (423)
++|.++ .|+.+|.+++++++.+.... ....+..++++..++.+.|+.-+ -+...++.+++-++|.+.|++
T Consensus 289 ---~gK~l~-gG~pi~av~~~~~i~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~-~~~l~~~~~~~g~~l~~~L~~l~~~ 363 (457)
T PRK05639 289 ---FGKGVA-SGMGLSGVIGRKELMDLTSGSALLTPAANPVISAAAEATLEIIE-EENLLKNALKVGEFIKKRLLEMKES 363 (457)
T ss_pred ---echhhc-CCCcceeEEehHHHHhhcCCCcccCCCcCHHHHHHHHHHHHHHH-HccHHHHHHHHHHHHHHHHHHHHHh
Confidence 799998 78999999999998873211 12245678888777777775411 012233333444444444443
Q ss_pred CCCCeecCCCceEEEEEeCCC------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014492 353 VPFLNPYPSYSNFILCEVTSG------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH 421 (423)
Q Consensus 353 ~~~~~~~p~~~~~~~~~~~~~------~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~ 421 (423)
.+.+.-..+.|.++.+.+... .....+.+.+.++|+++.+.+ ...+.+||......+.++++++++.
T Consensus 364 ~~~~~~VrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~g--~~~~~lr~~Ppl~it~~~id~~~~~ 436 (457)
T PRK05639 364 FEVIGDVRGKGLMIGVEIVKENGKPDPELTGKICWRAFELGLILPSYG--MFGNVIRITPPLVITKEIAEKGLEI 436 (457)
T ss_pred CCCEEeeccceeEEEEEEecCCCCCCHHHHHHHHHHHHhCCeEEeecC--CCCCEEEEeCCCccCHHHHHHHHHH
Confidence 443333456777777776321 124567788889999997653 1247899997643333445554443
No 320
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.65 E-value=3.4e-16 Score=146.28 Aligned_cols=251 Identities=22% Similarity=0.236 Sum_probs=169.4
Q ss_pred CCHHHHHHHhcCCCC-CCC-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCch---hh
Q 014492 109 PPPEVREALGQLKFP-YIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT---MY 183 (423)
Q Consensus 109 ~~~~v~~al~~~~~~-~~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~---~~ 183 (423)
+.|++.+++.+...+ ..| .|+...++++.+++++|. +..+++++++.+..++++++++|++.|++..++|. ..
T Consensus 7 ~~~~m~~a~~~a~~gd~~Yg~D~~~~~l~~~i~~l~g~--e~a~f~~sGT~An~~al~~~~~~~~~vi~~~~aHi~~~E~ 84 (290)
T PF01212_consen 7 PTPAMLEAMAAANVGDDAYGEDPTTARLEERIAELFGK--EAALFVPSGTMANQLALRAHLRPGESVICADTAHIHFDET 84 (290)
T ss_dssp S-HHEEHHHHHTTSB-CCTTSSHHHHHHHHHHHHHHTS--SEEEEESSHHHHHHHHHHHHHHTTEEEEEETTEHHHHSST
T ss_pred CCHHHHHHHHccccCCcccCCChhHHHHHHHHHHHcCC--CEEEEeCCCChHHHHHHHHHHhcCCceeccccceeeeecc
Confidence 678999999765433 358 455688999999999995 35568888999999999999999999999999885 33
Q ss_pred HHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CCceEEEEcCCCCCc-CcCCCHHHHHHHHcC----CCEEEEc
Q 014492 184 EFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKCIFLTSPNNPD-GSIINDEDLLKILEM----PILVVLD 253 (423)
Q Consensus 184 ~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~i~l~~p~NPt-G~~~~~~~l~~i~~~----~~~li~D 253 (423)
.......|.+++.++.+++..+|+++|++.+.. .++++|+|++|+|-. |.+++.+++++|++. |+.|++|
T Consensus 85 ga~~~~~G~~~~~l~~~~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmD 164 (290)
T PF01212_consen 85 GAIEELSGAKLIPLPSDDDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMD 164 (290)
T ss_dssp THHHHHTTCEEEEEBECTGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEE
T ss_pred chhhHhcCcEEEECCCcccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEe
Confidence 344456999999999766468999999999975 468999999999953 899999999998875 9999999
Q ss_pred cCCccccC--CCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCC-----CcHHHH-----HH
Q 014492 254 EAYTEFSG--LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN-----VSVAAE-----VA 321 (423)
Q Consensus 254 eay~~~~~--~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~-----~~~~~~-----~a 321 (423)
.+...-.- .+.....+..+- +++..|++|.+|+++ -+.++++++++++..+.....+ ...++. .+
T Consensus 165 GARl~~a~~~~~~~~~e~~~~~-D~v~~~~tK~~g~~~--Gavl~~~~~~i~~~~~~~k~~gg~~~~~G~~~a~~~~~~~ 241 (290)
T PF01212_consen 165 GARLANAAAALGVSLAEIAAGA-DSVSFGGTKNGGAPG--GAVLAGNKEFIAKARRQRKRLGGGMRQAGVLAAAELYQFA 241 (290)
T ss_dssp ETTHHHHHCHHHHHHHHHHTTS-SEEEEETTSTT-SSS--EEEEEESHHHHHHHHHHHHHHTHHHHHTTHHHHHHHHHHH
T ss_pred hhhHHHhhhcccccHHHHhhhC-CEEEEEEEccccccc--ceEEEechHHHHHHHHHHHHhccCeeecceeeeechhhHH
Confidence 99643221 011122222222 255567899888765 2567779997766554432211 112222 12
Q ss_pred HHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEE
Q 014492 322 ACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFIL 367 (423)
Q Consensus 322 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~ 367 (423)
+..+++ .| .....+-.++.++|.+.|+.+++..+.|..++-++
T Consensus 242 ~l~~l~--~~-~~~~~~~~~~A~~La~~l~~~~~~~~~~~~tn~~~ 284 (290)
T PF01212_consen 242 ALRALE--LW-LERARHANAMAKRLAAGLEALGGVLPRPVETNQVF 284 (290)
T ss_dssp HHCHEE--CS-HHHHHCHHHHHHCHHHCHHEECEEEETTSS-HHHH
T ss_pred HHHHHH--hh-HHHHHHHHHHHHHHHHHHHHCCCcccCCCCCcEEe
Confidence 223332 23 34445556778899999999887666666555433
No 321
>PRK07482 hypothetical protein; Provisional
Probab=99.65 E-value=2.2e-13 Score=136.35 Aligned_cols=322 Identities=15% Similarity=0.119 Sum_probs=194.9
Q ss_pred CCCCCCeeEcCCCCC--CCC-CCHHHHHHHhc-CCC---CC---CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHH
Q 014492 91 GRKPEDIVKIDANEN--PYG-PPPEVREALGQ-LKF---PY---IYPDPESRRLRAALAKDSGLESDHILVGCGADELID 160 (423)
Q Consensus 91 ~~~~~~~i~l~~~~~--~~~-~~~~v~~al~~-~~~---~~---~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~ 160 (423)
+.+++.+||+..+.. .++ .+|+|.+|+.+ +.. .+ .++.....+|-+.|++...-..+.+++++++++|++
T Consensus 46 D~dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGSEAve 125 (461)
T PRK07482 46 DAQGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAYYHTYVGHGTEASITLSKRIIDRAPAGMSKVYYGLSGSDANE 125 (461)
T ss_pred ECCCCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhcCccccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHH
Confidence 456788999987733 333 36888888876 221 11 233333456777777776434578999999999999
Q ss_pred HHHHHhc------C-C-CCeEEEcCCCchhhHHHHHH-CC------------CeEEEecCCCCCC-------------CC
Q 014492 161 LIMRCVL------D-P-GDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKSDFS-------------LN 206 (423)
Q Consensus 161 ~~~~~l~------~-~-gd~Vl~~~p~y~~~~~~~~~-~g------------~~~~~v~~~~~~~-------------~d 206 (423)
.+++... . + ..+|+....+|++....+.. .| ..+..++.+..+. .+
T Consensus 126 ~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 205 (461)
T PRK07482 126 TQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYC 205 (461)
T ss_pred HHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHH
Confidence 9998542 1 2 25788888888764432221 11 1122222111101 13
Q ss_pred HHHHHHHhh---cCCceEEEEcCCCCCcCcCC-CHHHH---HHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEE
Q 014492 207 VELIADAVE---REKPKCIFLTSPNNPDGSII-NDEDL---LKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLI 276 (423)
Q Consensus 207 ~~~l~~~i~---~~~~~~i~l~~p~NPtG~~~-~~~~l---~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i 276 (423)
++.+++.+. .+++.+|++...+...|.+. +.+-+ ++||+. |+++|.||++..|...+.. ....+..+.++
T Consensus 206 ~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv~PDiv 285 (461)
T PRK07482 206 ADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGIEPDLI 285 (461)
T ss_pred HHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCCCCCEE
Confidence 577777774 24578888886666668775 44444 455555 9999999999988533321 12222334444
Q ss_pred EEccChhhhcccCc-cccccccCHHHHHHHHH---------hcCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHH
Q 014492 277 VLRTFSKRAGLAGL-RVGYGAFPLSIIEYLWR---------AKQPYNVSVAAEVAACAALQN---PIYLEKVKEALIKER 343 (423)
Q Consensus 277 ~i~S~SK~~g~~G~-R~G~i~~~~~~~~~l~~---------~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~ 343 (423)
+ ++|.++ .|+ .+|.+++.+++.+.+.. ....|+.++++.+++.+.|+. ++.++...+.-...+
T Consensus 286 ~---~gKgl~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~~~~~l~~~~~~~g~~l~ 361 (461)
T PRK07482 286 T---VAKGLT-SAYAPLSGSIVGEKVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILERENLVGNAAEVGAYFR 361 (461)
T ss_pred E---Eccccc-cCccccceeeecHHHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 3 589987 675 89999999998876652 123467889998888888753 233344333333344
Q ss_pred HHHHHHHccCCCCeecCCCceEEEEEeCCCC------C-----HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---Ch
Q 014492 344 ERLFKLLKDVPFLNPYPSYSNFILCEVTSGM------D-----AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KP 409 (423)
Q Consensus 344 ~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~------~-----~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~ 409 (423)
+.|.+.+++.+.+.-..+.|.++.+++.+.. + ...+...+.++||++++.. ..+.+|+... +.
T Consensus 362 ~~L~~l~~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~~---~~~~i~~~Ppl~it~ 438 (461)
T PRK07482 362 ARLRAAFGDHPLVGEVRGVGMLAAVEFVADRDDRTPFDPALKIGPQVSAAALERGVIARAMP---HGDILGFAPPLVLTR 438 (461)
T ss_pred HHHHHHHhcCCCEEEEeeceeEEEEEeccCCCcCCCCChhhHHHHHHHHHHHHCCcEEecCC---CCCEEEEeCCCCCCH
Confidence 4444444455544434567778778774211 1 2467788889999986532 1367999865 34
Q ss_pred hhHHHHHHHH
Q 014492 410 EHTDALMECL 419 (423)
Q Consensus 410 ~~~~~l~~al 419 (423)
++.+++.+++
T Consensus 439 ~ei~~~~~~l 448 (461)
T PRK07482 439 AEADEIVAIA 448 (461)
T ss_pred HHHHHHHHHH
Confidence 4444444433
No 322
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.64 E-value=2.3e-14 Score=138.57 Aligned_cols=259 Identities=16% Similarity=0.167 Sum_probs=161.5
Q ss_pred hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC-CCC----CC
Q 014492 131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDF----SL 205 (423)
Q Consensus 131 ~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~----~~ 205 (423)
..+.++.+|+.||.+ +..+++||++.++..++.+++++||.|+++..+|-+....+...|++++.++.. +.+ .+
T Consensus 68 I~eAe~~aA~~fGAd-~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~~~~~gi~~~i 146 (417)
T PF01276_consen 68 IKEAEELAARAFGAD-KTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALILSGAIPVYIPPEDNEYGIIGGI 146 (417)
T ss_dssp HHHHHHHHHHHHTES-EEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHHHHTEEEEEEEEEE-TTS-BEEB
T ss_pred HHHHHHHHHHhcCCC-eEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCeEEEecCCccccCCccCC
Confidence 568899999999953 578899999999999999999999999999999998888999999999999843 222 34
Q ss_pred CH-----HHHHHHhhc-CCce---EEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCcccc-CCCchhhhh-----
Q 014492 206 NV-----ELIADAVER-EKPK---CIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLESRMEWV----- 269 (423)
Q Consensus 206 d~-----~~l~~~i~~-~~~~---~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~-~~~~~~~~~----- 269 (423)
++ +.+++++++ +..| +++|++|+. .|.+++++++.++++. ++.|++||||.... +.+-.....
T Consensus 147 ~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY-~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~lp~~a~~~gad 225 (417)
T PF01276_consen 147 SPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY-YGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHPLPRSALALGAD 225 (417)
T ss_dssp -GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T-TSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSGGGTTCSSTTSS
T ss_pred ChhhhhHHHHHHHHHhCccccCceEEEEeCCCC-CeEEECHHHHHHHhcccCCEEEEEccccccccCCCCccchhhccCc
Confidence 55 999999874 3344 499999987 7999999999999998 99999999997543 321111111
Q ss_pred -ccCCcEEEEccChhhhcccCcccc-ccccCH------HHHHHHHHhcCCCCCcHHHHHHHH---HHhCC---hHHHHHH
Q 014492 270 -KKHDNLIVLRTFSKRAGLAGLRVG-YGAFPL------SIIEYLWRAKQPYNVSVAAEVAAC---AALQN---PIYLEKV 335 (423)
Q Consensus 270 -~~~~~~i~i~S~SK~~g~~G~R~G-~i~~~~------~~~~~l~~~~~~~~~~~~~~~a~~---~~l~~---~~~~~~~ 335 (423)
.....++++.|.+|.+ +++.-+ ++..+. +.+++.....+..++|.+..+... ..++. .+.+++.
T Consensus 226 ~~~~~~~~vvqS~HKtL--~altQts~lh~~~~~~v~~~~~~~~l~~~~TTSPSY~lmASlD~a~~~m~~~~G~~l~~~~ 303 (417)
T PF01276_consen 226 RPNDPGIIVVQSTHKTL--PALTQTSMLHVKGDRIVDHERVNEALSMHQTTSPSYPLMASLDVARAQMEEEEGRELLEEA 303 (417)
T ss_dssp -CTSBEEEEEEEHHHHS--SS-TT-EEEEEETCCCTTHHHHHHHHHHHS-SS--HHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred cccccceeeeechhhcc--cccccceEEEecCCCcccHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHhhhhhHHHHHHH
Confidence 1134569999999975 676654 444422 333333344455566655443333 33311 1223444
Q ss_pred HHHHHHHHHHHHHHHccCCCCeecC------CC------------------ceE------EEEEeC----------CCCC
Q 014492 336 KEALIKERERLFKLLKDVPFLNPYP------SY------------------SNF------ILCEVT----------SGMD 375 (423)
Q Consensus 336 ~~~~~~~~~~l~~~L~~~~~~~~~p------~~------------------~~~------~~~~~~----------~~~~ 375 (423)
.+...+.|+++.+ ++++.++.+.. .. +.+ +.+.+| .|.+
T Consensus 304 i~~a~~~R~~i~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~whgf~~~~~~~~~lDP~K~ti~~pG~~~~g~~~~~Gi~ 382 (417)
T PF01276_consen 304 IELAEEFRKKINR-LNDIWGFKVLGPEDVGGEGCWDLDPGENWHGFEGLADDYYMLDPTKLTINTPGIDADGELSELGIP 382 (417)
T ss_dssp HHHHHHHHHHHHH-HCCT-SSEESS-SEECTCCGCB--TT-TTT--TT--TTSEEE-TTEEEEE-STBETTSSB-SS---
T ss_pred HHHHHHHHHHHHh-cCCCceEecCCccccCCccccccCccccchhchhcccCccccCCcEEEEEccCcCcCCcccccCCC
Confidence 4444444444433 36665554421 11 112 345543 2678
Q ss_pred HHHHHHHHHhCCcEEEeCC
Q 014492 376 AKKLKDDLAKMGVMIRHYN 394 (423)
Q Consensus 376 ~~~l~~~L~~~gI~v~~~~ 394 (423)
+..+.++|.++||.+.-.+
T Consensus 383 g~~~~~~L~~~~I~~Ek~d 401 (417)
T PF01276_consen 383 GYIVEKYLREHGIQVEKTD 401 (417)
T ss_dssp HHHHHHHHHHTTEE-SEEE
T ss_pred HHHHHHHHHHcCCEEEecc
Confidence 8899999998899886543
No 323
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.64 E-value=2.1e-13 Score=135.31 Aligned_cols=320 Identities=14% Similarity=0.159 Sum_probs=194.1
Q ss_pred CCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCC-C---C-CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492 92 RKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF-P---Y-IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (423)
Q Consensus 92 ~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~-~---~-~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~ 162 (423)
.+++.++|+..+. ..++ .+|++.+++.+ +.. . . .+..+...++-+.+++..+-.-+.++++++++++++.+
T Consensus 42 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~f~~sGseA~e~A 121 (427)
T TIGR00508 42 DDGRRLIDGMSSWWAAIHGYNHPRLNAAAQKQIDKMSHVMFGGFTHKPAIELCQKLVKMTPNALDCVFLADSGSVAVEVA 121 (427)
T ss_pred CCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCCCCCEEEEeCCcHHHHHHH
Confidence 3567899997763 2333 46888888776 221 1 1 12333445677778777654447999999999999988
Q ss_pred HHHhcC-------CC-CeEEEcCCCchhhHHHHHH-CCCe-------------EEEecCCC-CC-----CCCHHHHHHHh
Q 014492 163 MRCVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGAA-------------VVKVPRKS-DF-----SLNVELIADAV 214 (423)
Q Consensus 163 ~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~-~g~~-------------~~~v~~~~-~~-----~~d~~~l~~~i 214 (423)
++.... +| .+|+...-+|+.....+-. .|.. +..++... .+ .-|++++++.+
T Consensus 122 lklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l 201 (427)
T TIGR00508 122 LKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLM 201 (427)
T ss_pred HHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCccccchhHHHHHHHHHHHH
Confidence 885331 23 5788888888754432222 1211 11222111 11 11466777777
Q ss_pred hc--CCceEEEEcCC-CCCcCcC-CCHHHHHHH---HcC-CCEEEEccCCccccCCCch--hhhhccCCcEEEEccChhh
Q 014492 215 ER--EKPKCIFLTSP-NNPDGSI-INDEDLLKI---LEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKR 284 (423)
Q Consensus 215 ~~--~~~~~i~l~~p-~NPtG~~-~~~~~l~~i---~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~ 284 (423)
.+ .++.+|++... ++-.|.. .+.+.+.+| |+. |+++|+||++..+...+.. ....+..+. ++ +++|.
T Consensus 202 ~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v~pD-i~--~~gK~ 278 (427)
T TIGR00508 202 ELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFACEHAGVVPD-IL--CVGKA 278 (427)
T ss_pred HhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchhhhcCCCCC-EE--Eechh
Confidence 52 35667777753 5555653 356666555 444 9999999999776433321 111222233 33 37999
Q ss_pred hcccCc-cccccccCHHHHHHHHHh-------cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCC-
Q 014492 285 AGLAGL-RVGYGAFPLSIIEYLWRA-------KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPF- 355 (423)
Q Consensus 285 ~g~~G~-R~G~i~~~~~~~~~l~~~-------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~- 355 (423)
++ .|+ .++.++.++++.+.+... ..+|..++++..++.++|+.-+ -++..++++++.++|.+.|+++..
T Consensus 279 l~-gG~~p~~a~~~~~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~-~~~~~~~~~~~~~~l~~~L~~l~~~ 356 (427)
T TIGR00508 279 LT-GGYMTLSATVTTDKVAQTISSGEAGCFMHGPTFMGNPLACAVAEASLAILL-EGEWQKQVSAIENQLKRELSPLRKN 356 (427)
T ss_pred hh-cCcccceEEEEcHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHHhhcC
Confidence 96 774 678888889988887642 2345668888888887776311 012345566666666666665532
Q ss_pred --CeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 356 --LNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 356 --~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
+....+.|.++.+.+.+..+...+.+.|.++||.+.+.. +.+|++.. +.++++++.+++++
T Consensus 357 ~~i~~vrg~G~~~~i~~~~~~~~~~~~~~l~~~Gv~~~~~~-----~~l~~~ppl~~t~~~id~~~~~l~~ 422 (427)
T TIGR00508 357 PVVKDVRVLGAIGVVEMYKPVNVEELQKKFVEQGVWIRPFG-----KLIYVMPPYIITTEQLQKLTAALIE 422 (427)
T ss_pred CCEEeEeccccEEEEEECCccCHHHHHHHHHHCCeEEEecC-----CEEEEECCCCCCHHHHHHHHHHHHH
Confidence 111233467777777544567889999999999997653 47999875 44555555555543
No 324
>PLN02452 phosphoserine transaminase
Probab=99.64 E-value=7.2e-14 Score=135.06 Aligned_cols=306 Identities=13% Similarity=0.076 Sum_probs=205.2
Q ss_pred eeEcCCCCCCCCCCHHHHHHHhcC--C----------CCCCCCCcc--hHHHHHHHHHHhCCCCC--cEEEeCCHHHHHH
Q 014492 97 IVKIDANENPYGPPPEVREALGQL--K----------FPYIYPDPE--SRRLRAALAKDSGLESD--HILVGCGADELID 160 (423)
Q Consensus 97 ~i~l~~~~~~~~~~~~v~~al~~~--~----------~~~~Y~~~g--~~~lr~~ia~~~g~~~~--~i~~t~G~~~al~ 160 (423)
.+.|.. .|...|++|++++.+- + .+|+-++.. ..+.++.+.+.++++.+ -+++..|++.+++
T Consensus 8 ~~~f~p--GP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~e 85 (365)
T PLN02452 8 VFNFSA--GPATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNYEVLFLQGGASTQFA 85 (365)
T ss_pred eEeeeC--CCCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEeCccHHHHH
Confidence 455554 4455578998887651 1 224434332 56788889999998432 4567789999999
Q ss_pred HHHHHhcCCCCeEEEcCCC-ch-hhHHHHHHCCCeEEEecCCCC---CCCCHHHHHHHhhcCCceEEEEcCCCCCcCcC-
Q 014492 161 LIMRCVLDPGDKIVDCPPT-FT-MYEFDAAVNGAAVVKVPRKSD---FSLNVELIADAVEREKPKCIFLTSPNNPDGSI- 234 (423)
Q Consensus 161 ~~~~~l~~~gd~Vl~~~p~-y~-~~~~~~~~~g~~~~~v~~~~~---~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~- 234 (423)
.++..++.+|+++++..-. |. .+...++.+|...+....+.+ ..+++++++. ..+.+.|.+|+....||+.
T Consensus 86 a~~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~hnETstGv~~ 162 (365)
T PLN02452 86 AIPLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASGKDEKYTKIPSVSEWEL---TPDAKFVHICANETIHGVEF 162 (365)
T ss_pred HHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCCChHHcCC---CCCCcEEEECCCCCCCcEec
Confidence 9999999999987765544 43 455667777764444421121 2456766522 2568899999999999996
Q ss_pred CCHHHHHHHHcCCCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhc-----
Q 014492 235 INDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK----- 309 (423)
Q Consensus 235 ~~~~~l~~i~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~----- 309 (423)
.+.+++ . ++++|+|.+...... +- .+.+.+ +...|..|.+|.+| +|+++++++.++++....
T Consensus 163 ~~~~~i---~--~~~lvVDa~Ss~g~~-pi---dv~~~~--v~~~saqK~lGP~G--l~~v~vr~~~l~~~~~~~~~~~~ 229 (365)
T PLN02452 163 KDYPDV---G--NVPLVADMSSNFLSK-PV---DVSKYG--VIYAGAQKNVGPSG--VTIVIIRKDLIGNARPITPGMLD 229 (365)
T ss_pred Cccccc---C--CCeEEEECCccccCc-cc---CHHHcC--EEEEecccccCCCC--eEEEEEcHHHHhhcccCCCchhh
Confidence 444333 2 479999999874432 11 122233 23358899999888 688999988887643211
Q ss_pred --------C-CCCCcHHHHHHHHHHhCC--h-HHHHHHHHHHHHHHHHHHHHHccCCCCe-e-cC---CCceEEEEEeCC
Q 014492 310 --------Q-PYNVSVAAEVAACAALQN--P-IYLEKVKEALIKERERLFKLLKDVPFLN-P-YP---SYSNFILCEVTS 372 (423)
Q Consensus 310 --------~-~~~~~~~~~~a~~~~l~~--~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~p---~~~~~~~~~~~~ 372 (423)
. .++++....+++..+|+. . ..++.+.++.+++.+++++.|++.+++. . .+ ...+.+.+.+++
T Consensus 230 ~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~~rs~~~vsF~~~~ 309 (365)
T PLN02452 230 YKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKSVRSLMNVPFTLGG 309 (365)
T ss_pred HHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChHHhCCeEEEEEcCC
Confidence 1 135667777777777664 1 2478899999999999999999865332 1 11 133456677775
Q ss_pred CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEe-c--ChhhHHHHHHHHhhh
Q 014492 373 GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSV-G--KPEHTDALMECLMHL 422 (423)
Q Consensus 373 ~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~-~--~~~~~~~l~~al~~l 422 (423)
....++|.+.+.++|+...+|.... .+ +|+|+ + ..++.+.|.++++++
T Consensus 310 ~~~~~~f~~~~~~~g~~~~~G~r~~-gg-~R~s~yna~~~~~v~~L~~~m~~f 360 (365)
T PLN02452 310 SELEAEFVKEAAKAGMVQLKGHRSV-GG-MRASIYNAMPLAGVEKLVAFMKDF 360 (365)
T ss_pred chhHHHHHHHHHHCCCcccCCcccc-Cc-eEEECcCCCCHHHHHHHHHHHHHH
Confidence 4467889999999999998876432 23 99996 2 567788888888765
No 325
>PRK07480 putative aminotransferase; Validated
Probab=99.64 E-value=1.3e-13 Score=137.66 Aligned_cols=319 Identities=18% Similarity=0.184 Sum_probs=190.4
Q ss_pred CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCC---C---CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHH
Q 014492 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF---P---YIYPDPESRRLRAALAKDSGLESDHILVGCGADELID 160 (423)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~---~---~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~ 160 (423)
..+++.+||+..+. ..++ .+|++.+++.+ +.. . ..++.+...+|.+.|++.++-..+.++++++++++++
T Consensus 46 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e 125 (456)
T PRK07480 46 DSEGNKILDGMAGLWCVNVGYGRKELADAAARQMRELPYYNTFFKTTHPPAIELAAKLAEVAPPGFNHVFFTNSGSEAND 125 (456)
T ss_pred eCCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHH
Confidence 45678899997762 3344 36888888876 221 1 1234444567888888877544568999999999999
Q ss_pred HHHHHhcC-------CC-CeEEEcCCCchhhHHHHHH-CCC------------eEEEecCCCCC----CCC--------H
Q 014492 161 LIMRCVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDF----SLN--------V 207 (423)
Q Consensus 161 ~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~----~~d--------~ 207 (423)
.+++.... +| .+|+...-+|++....+.. .|. .+..++.+..+ ..+ +
T Consensus 126 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 205 (456)
T PRK07480 126 TVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAA 205 (456)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHH
Confidence 99884421 23 4688888888654322211 111 11122211100 011 2
Q ss_pred HHHHHHhhc---CCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEE
Q 014492 208 ELIADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIV 277 (423)
Q Consensus 208 ~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~ 277 (423)
+.+++.+.+ .++.+|++...+.-.|.+.+ .+.+++||+. |+++|+||++..|...+.. ....+..+.+
T Consensus 206 ~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDi-- 283 (456)
T PRK07480 206 RQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGIKPDL-- 283 (456)
T ss_pred HHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCCCCCe--
Confidence 556554421 46788888877776788776 4556667766 9999999999887533321 1222222333
Q ss_pred EccChhhhcccCc-cccccccCHHHHHHHHH------hcCCCCCcHHHHHHHHHHhCC---hHHHHHH-HHHHHHHHHHH
Q 014492 278 LRTFSKRAGLAGL-RVGYGAFPLSIIEYLWR------AKQPYNVSVAAEVAACAALQN---PIYLEKV-KEALIKERERL 346 (423)
Q Consensus 278 i~S~SK~~g~~G~-R~G~i~~~~~~~~~l~~------~~~~~~~~~~~~~a~~~~l~~---~~~~~~~-~~~~~~~~~~l 346 (423)
-+++|.++ .|+ .+|.+++++++.+.+.. ....|+.++++.+++.+.|+- ++.+++. .+.-...++.|
T Consensus 284 -v~~gK~l~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~~g~~l~~~l 361 (456)
T PRK07480 284 -MTIAKGLT-SGYIPMGAVGVGDRVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILRDEGIVERVRDDTGPYLQKRL 361 (456)
T ss_pred -eeeehhhc-cCCccceEEEEcHHHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 35689987 674 89999999998887731 223577889998888888853 2223333 12223333334
Q ss_pred HHHHccCCCCeecCCCceEEEEEeCCC-C------C----HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC---hhhH
Q 014492 347 FKLLKDVPFLNPYPSYSNFILCEVTSG-M------D----AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK---PEHT 412 (423)
Q Consensus 347 ~~~L~~~~~~~~~p~~~~~~~~~~~~~-~------~----~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~---~~~~ 412 (423)
.+ +.+.+.+.-..+.|.++.+++.+. . + ...+.+.++++||++.+.. +.+||+... .++.
T Consensus 362 ~~-l~~~~~i~~vrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~-----~~l~~~Ppl~it~~ei 435 (456)
T PRK07480 362 RE-LADHPLVGEVRGVGLVGAIELVKDKATRERFEAGGGVGTICRDHCFANGLIMRAVG-----DRMIISPPLVITHAEI 435 (456)
T ss_pred HH-hhcCCCeeeEEeecceEEEEEeccccccccCcchhhHHHHHHHHHHHCCcEEeecC-----CEEEEECCCCCCHHHH
Confidence 33 344454333346677777777311 0 1 1356677789999997632 579999763 4444
Q ss_pred HHHHHHH
Q 014492 413 DALMECL 419 (423)
Q Consensus 413 ~~l~~al 419 (423)
+++.+++
T Consensus 436 d~~~~~l 442 (456)
T PRK07480 436 DELVEKA 442 (456)
T ss_pred HHHHHHH
Confidence 4444443
No 326
>PRK07036 hypothetical protein; Provisional
Probab=99.64 E-value=2.7e-13 Score=135.76 Aligned_cols=319 Identities=15% Similarity=0.173 Sum_probs=193.5
Q ss_pred CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCC---CCC---CCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHH
Q 014492 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF---PYI---YPDPESRRLRAALAKDSGLESDHILVGCGADELID 160 (423)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~---~~~---Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~ 160 (423)
..+++.+||+..+. ..++ .+|++.+++.+ +.. ... ++.....++-+.+++...-..+.++++++++++++
T Consensus 47 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve 126 (466)
T PRK07036 47 DADGRRYLDGIGGMWCVNVGYGREEMADAIADQARRLPYYTPFGDMTNAPAAELAAKLAELAPGDLNHVFLTTGGSTAVD 126 (466)
T ss_pred ECCCCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCcccccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHH
Confidence 34577899997763 3343 36888888876 221 111 23333456777777766433468999999999999
Q ss_pred HHHHHhc------C-C-CCeEEEcCCCchhhHHHHHHC-C------------CeEEEecCCCC----CCCC--------H
Q 014492 161 LIMRCVL------D-P-GDKIVDCPPTFTMYEFDAAVN-G------------AAVVKVPRKSD----FSLN--------V 207 (423)
Q Consensus 161 ~~~~~l~------~-~-gd~Vl~~~p~y~~~~~~~~~~-g------------~~~~~v~~~~~----~~~d--------~ 207 (423)
.+++... . + ..+|+....+|+.....+... | ..+..+|.+.. ++.+ +
T Consensus 127 ~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 206 (466)
T PRK07036 127 SALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLV 206 (466)
T ss_pred HHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHHHH
Confidence 9988431 1 2 257888888887654333221 1 11233332111 1111 2
Q ss_pred HHHHHHhh---cCCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCchhh---hhccCCcEE
Q 014492 208 ELIADAVE---REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRME---WVKKHDNLI 276 (423)
Q Consensus 208 ~~l~~~i~---~~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~---~~~~~~~~i 276 (423)
+.+++.+. ..++.+|++...+...|.+.+ .++++++|+. |+++|+||++..|...+.... ..+..+.++
T Consensus 207 ~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~PDiv 286 (466)
T PRK07036 207 DEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGIQPDII 286 (466)
T ss_pred HHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCCCCCEE
Confidence 34455553 246788888877777788776 5667777876 999999999987754332211 122223333
Q ss_pred EEccChhhhcccC-ccccccccCHHHHHHHHHh---------cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Q 014492 277 VLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA---------KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERL 346 (423)
Q Consensus 277 ~i~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~~---------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l 346 (423)
+++|.++ .| +.+|.+++++++.+.+... ...|+.++++.+++.+.|+.-+ -+...++.+++.++|
T Consensus 287 ---t~gK~l~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i~-~~~l~~~~~~~g~~l 361 (466)
T PRK07036 287 ---TFAKGLT-SGYQPLGAVIISERLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIME-REGLCEHVREVGPYF 361 (466)
T ss_pred ---EEccccc-cCccccEEEEEcHHHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHH
Confidence 4689987 78 5899999999998877531 1246778898888888775311 012334444444444
Q ss_pred HHHHc---cCCCCeecCCCceEEEEEeCCCC-----------CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---Ch
Q 014492 347 FKLLK---DVPFLNPYPSYSNFILCEVTSGM-----------DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KP 409 (423)
Q Consensus 347 ~~~L~---~~~~~~~~p~~~~~~~~~~~~~~-----------~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~ 409 (423)
.+.|+ +.+.+.-..+.|.++.+++.+.. -...+.+.+.++||++.+.. +.+||+.. +.
T Consensus 362 ~~~L~~l~~~~~v~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~-----~~~~l~Ppl~it~ 436 (466)
T PRK07036 362 EERLASLRELPLVGDVRGDHLMACVECVADKGSKALLPEDIAIGQRIDRHCQERGLLVRPLE-----HLCVLSPPLIITR 436 (466)
T ss_pred HHHHHHhccCCCEEEEEeeceEEEEEEccCccccCCCCchhHHHHHHHHHHHHCCcEEeecC-----CEEEEeCCCcCCH
Confidence 44443 34433334466777778773210 13457778889999998643 56888855 45
Q ss_pred hhHHHHHHHH
Q 014492 410 EHTDALMECL 419 (423)
Q Consensus 410 ~~~~~l~~al 419 (423)
++.+++.+++
T Consensus 437 ~~id~~~~~l 446 (466)
T PRK07036 437 AQIDEIVAIL 446 (466)
T ss_pred HHHHHHHHHH
Confidence 5555555544
No 327
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.63 E-value=1.1e-13 Score=127.75 Aligned_cols=283 Identities=19% Similarity=0.237 Sum_probs=188.5
Q ss_pred CCCC---CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCch----hhHHHHHHCCCeEE
Q 014492 123 PYIY---PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT----MYEFDAAVNGAAVV 195 (423)
Q Consensus 123 ~~~Y---~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~----~~~~~~~~~g~~~~ 195 (423)
++.| .+|....|++.|+.+-|- -.-+.+.+++.++..++..++++||.|+..+--|. .+....+..|+++.
T Consensus 53 G~iYsRi~NPT~~vlE~RiAaLEGG--~aa~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~ 130 (426)
T COG2873 53 GNIYTRIMNPTTDVLEERIAALEGG--VAALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVR 130 (426)
T ss_pred CceeeeccCchHHHHHHHHHHhhcc--hhhhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEE
Confidence 4445 467788999999998752 12345667778999999999999999998887775 44455678999999
Q ss_pred EecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCc
Q 014492 196 KVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDN 274 (423)
Q Consensus 196 ~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~ 274 (423)
.+. ..|++.++++++ +++|+|++..-.||-+.+.+.+.+.+||+. |+++|+|..+..-. .... -+++.
T Consensus 131 fvd-----~~d~~~~~~aI~-~nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~atpy----l~rP-~~hGA 199 (426)
T COG2873 131 FVD-----PDDPENFEAAID-ENTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFATPY----LCRP-IEHGA 199 (426)
T ss_pred EeC-----CCCHHHHHHHhC-cccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEecCCCcce----ecch-hhcCC
Confidence 997 346899999998 899999999999999999999999999998 99999999987321 1111 14566
Q ss_pred EEEEccChhhhcccCccccccccCHHHHHHHH-----HhcCC------------CCCcHHHHHHHHHHhCC---------
Q 014492 275 LIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW-----RAKQP------------YNVSVAAEVAACAALQN--------- 328 (423)
Q Consensus 275 ~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~-----~~~~~------------~~~~~~~~~a~~~~l~~--------- 328 (423)
.|++.|++|.+|--|--+|-++.+....+.-. .+..+ ++...+...+-...|+|
T Consensus 200 DIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~lsPfn 279 (426)
T COG2873 200 DIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFIIKARVQLLRDLGATLSPFN 279 (426)
T ss_pred CEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHHHHHHHHHHhcccccCcHH
Confidence 79999999998878888887776433222221 11110 11112222222233332
Q ss_pred -------hHHHHHHHHHHHHHHHHHHHHHccCCCCe-e-cC-----------------CCceEEEEEeCCC-CCHHHHHH
Q 014492 329 -------PIYLEKVKEALIKERERLFKLLKDVPFLN-P-YP-----------------SYSNFILCEVTSG-MDAKKLKD 381 (423)
Q Consensus 329 -------~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~p-----------------~~~~~~~~~~~~~-~~~~~l~~ 381 (423)
.+.+.-+.++..++..++.+.|++.+.+. + +| ..|..+.+.+.++ ...+.|.+
T Consensus 280 Afl~lqGlETL~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~~~~~h~la~kyl~~g~g~vltF~~kgg~ea~~~fi~ 359 (426)
T COG2873 280 AFLLLQGLETLSLRMERHCENALKVAEFLENHPKVAWVNYPGLASHPYHALAKKYLPKGAGAVLTFGVKGGYEAGKKFID 359 (426)
T ss_pred HHHHHhchhhhHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCCCCcchhHHHhhccCCCceEEEEEecChHHHHHHHHH
Confidence 23355566777889999999998865332 1 22 2245667788755 23355555
Q ss_pred HHH--h--CC------cEEEeCCC-------------CCCCCeEEEEecChhhHHHHHHHH
Q 014492 382 DLA--K--MG------VMIRHYNN-------------KELKGYVRVSVGKPEHTDALMECL 419 (423)
Q Consensus 382 ~L~--~--~g------I~v~~~~~-------------~~~~~~iRis~~~~~~~~~l~~al 419 (423)
.|. . .+ +.+.|.+. .-.++.||+|++.++. ++|..-|
T Consensus 360 ~l~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~aGv~~~~IRlSVGIEd~-~DiiaDl 419 (426)
T COG2873 360 ALKLFSHLANIGDARSLVIHPASTTHRQLSEEEQAAAGVTPDLIRLSVGIEDI-DDIIADL 419 (426)
T ss_pred HHHHHHhhccccccceeEecCcccchhcCCHHHHHhcCCCCCcEEEEeccCCH-HHHHHHH
Confidence 543 1 12 23334322 1236789999997653 4444433
No 328
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.63 E-value=2.3e-13 Score=134.76 Aligned_cols=323 Identities=12% Similarity=0.105 Sum_probs=193.5
Q ss_pred CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCCC--CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHH
Q 014492 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (423)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~--~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~ 164 (423)
..+++.+||+..+. ..++ .+|++.+++.+ +... ..++.+...+|-+.+.+.++...+.++++++++|+++.+++
T Consensus 49 D~dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGsEA~e~Aik 128 (433)
T PRK00615 49 DSLGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAERGTSYGLTSEQEILFAEELFSYLGLEDHKIRFVSSGTEATMTAVR 128 (433)
T ss_pred ECCCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHH
Confidence 35578899997763 3344 46888888876 2221 22344445677788887775434689999999999999988
Q ss_pred HhcC-CC-CeEEEcCCCchhhHH---HH-HHCCCeE----EEe--c-CCCC----CCCCHHHHHHHhhc--CCceEEEEc
Q 014492 165 CVLD-PG-DKIVDCPPTFTMYEF---DA-AVNGAAV----VKV--P-RKSD----FSLNVELIADAVER--EKPKCIFLT 225 (423)
Q Consensus 165 ~l~~-~g-d~Vl~~~p~y~~~~~---~~-~~~g~~~----~~v--~-~~~~----~~~d~~~l~~~i~~--~~~~~i~l~ 225 (423)
.... .| .+|+....+|++... .+ ...+... ... + .... ..-|++.+++.+.+ .++.+|++.
T Consensus 129 lAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~E 208 (433)
T PRK00615 129 LARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIFE 208 (433)
T ss_pred HHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEEC
Confidence 4321 23 678888888876431 11 1111000 000 0 0000 01268888888753 356788877
Q ss_pred CCCCCcCcCCCHH----HHHHHHcC-CCEEEEccCCccccCCCch-hhhhccCCcEEEEccChhhhcccCccccccccCH
Q 014492 226 SPNNPDGSIINDE----DLLKILEM-PILVVLDEAYTEFSGLESR-MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299 (423)
Q Consensus 226 ~p~NPtG~~~~~~----~l~~i~~~-~~~li~Deay~~~~~~~~~-~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~ 299 (423)
......|.+.+.+ ++.++|+. |+++|+||++..|..+... ....+..+.+ + +++|.+| .|+.+|++++++
T Consensus 209 pv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~R~G~~ga~~~~gv~PDi-~--~~gK~lg-gG~p~~av~~~~ 284 (433)
T PRK00615 209 PICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGFRVAQGGAAAIYHVKPDI-T--VYGKILG-GGLPAAAVVAHK 284 (433)
T ss_pred CCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccccccHhHHHHhcCCCCCe-E--EEccccc-CCcceeeeeecH
Confidence 7777789888765 78888876 9999999999766322111 1111222333 2 4799997 678899999999
Q ss_pred HHHHHHHHhc-----CCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCC-CeecCCCceEEEEEe
Q 014492 300 SIIEYLWRAK-----QPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPF-LNPYPSYSNFILCEV 370 (423)
Q Consensus 300 ~~~~~l~~~~-----~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~~p~~~~~~~~~~ 370 (423)
++++.+.... ..++.++++.+++.+.|+. ++..++..+.-...++.|.+.+++.++ +.... .|.++.+.+
T Consensus 285 ~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r-~G~~~~i~~ 363 (433)
T PRK00615 285 SIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCREQGFYTQLSTLEQNFLSPIEEMIRSQGFPVSLVR-YGSMFSFFF 363 (433)
T ss_pred HHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEe-eceEEEEEE
Confidence 9998875321 2355688888888877753 222333333333333444444444332 22233 566666666
Q ss_pred CCCC-------------CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014492 371 TSGM-------------DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH 421 (423)
Q Consensus 371 ~~~~-------------~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~ 421 (423)
.+.. ....+...|.++||++.+...+. ..++... +.++++++.+++++
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~--~~ls~~h-t~~did~~~~a~~~ 424 (433)
T PRK00615 364 NENRPNNLAEAQLSDIEAFQTFYQSAFSKGVYLSPSPFEA--SFLSSAH-SMENLDYAQNVLID 424 (433)
T ss_pred eCCCCCChHHHhhCCHHHHHHHHHHHHHCCeeecCccccc--cceecCC-CHHHHHHHHHHHHH
Confidence 4211 12367888889999998765321 1222222 45556666666654
No 329
>PRK06917 hypothetical protein; Provisional
Probab=99.63 E-value=7.7e-13 Score=131.91 Aligned_cols=325 Identities=15% Similarity=0.148 Sum_probs=193.7
Q ss_pred CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCC-CC----CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF-PY----IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (423)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~-~~----~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~ 161 (423)
..+++.+||+..+. ..++ .+|+|.+++.+ +.. .+ .|..+...+|.+.|++.+.-..+.++++++++++++.
T Consensus 27 D~dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~ 106 (447)
T PRK06917 27 DQNGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSFVYRSQFTSEPAEKLAKKLSDLSPGDLNWSFFVNSGSEANET 106 (447)
T ss_pred eCCCCEEEECchhHHhccCCCCCHHHHHHHHHHHhhCcCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCChHHHHHH
Confidence 35678899997763 3354 37888888876 221 11 2333344577888887765334689999999999999
Q ss_pred HHHHhc-------CCC-CeEEEcCCCchhhHHHHHH-CCC------------eEEEecCCCCC----CC--------CHH
Q 014492 162 IMRCVL-------DPG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDF----SL--------NVE 208 (423)
Q Consensus 162 ~~~~l~-------~~g-d~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~----~~--------d~~ 208 (423)
+++... .+| .+|+....+|+.....+.. .|. .+..+|.+... .- +++
T Consensus 107 AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 186 (447)
T PRK06917 107 AMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACAT 186 (447)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHH
Confidence 998541 123 6788888888755433322 111 11122211100 00 245
Q ss_pred HHHHHhhc---CCceEEEEcCCCC-CcCcCC-CHHHHH---HHHcC-CCEEEEccCCccccCCCchh--hhhccCCcEEE
Q 014492 209 LIADAVER---EKPKCIFLTSPNN-PDGSII-NDEDLL---KILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIV 277 (423)
Q Consensus 209 ~l~~~i~~---~~~~~i~l~~p~N-PtG~~~-~~~~l~---~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~ 277 (423)
.+++.+++ +++.+|++..... --|.+. +.+.++ ++|+. |+++|.||++..|...+... ...+..+.+
T Consensus 187 ~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~PDi-- 264 (447)
T PRK06917 187 ELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFAMEHWGVEPDI-- 264 (447)
T ss_pred HHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchhhHHhcCCCCCE--
Confidence 66766652 3578888875443 345554 455444 45554 99999999998774322211 222223333
Q ss_pred EccChhhhcccCc-cccccccCHHHHHHHHHh------cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHH
Q 014492 278 LRTFSKRAGLAGL-RVGYGAFPLSIIEYLWRA------KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLL 350 (423)
Q Consensus 278 i~S~SK~~g~~G~-R~G~i~~~~~~~~~l~~~------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L 350 (423)
-+++|.++ .|+ .+|.+++++++.+.+... ...|+.++++.+++.+.|+.-+ -+...++.+++-++|.+.|
T Consensus 265 -~~~gK~l~-~G~~Pi~a~~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~-~~~l~~~~~~~g~~l~~~L 341 (447)
T PRK06917 265 -MTLGKGLG-AGYTPIAATVVSDRVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYME-KHNLPEKAAEKGEYLIKGL 341 (447)
T ss_pred -EEeeehhc-cCCcceEEEEEcHHHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHH-HCCHHHHHHHHHHHHHHHH
Confidence 35689997 785 899999999998877532 1246778888888888875311 0123344444445555544
Q ss_pred cc----CCCCeecCCCceEEEEEeCCC-----------CCHHHHHHHHHhCCcEEEeCCC---CCCCCeEEEEec---Ch
Q 014492 351 KD----VPFLNPYPSYSNFILCEVTSG-----------MDAKKLKDDLAKMGVMIRHYNN---KELKGYVRVSVG---KP 409 (423)
Q Consensus 351 ~~----~~~~~~~p~~~~~~~~~~~~~-----------~~~~~l~~~L~~~gI~v~~~~~---~~~~~~iRis~~---~~ 409 (423)
++ .+.+.-....|.++.+++.+. .-...+.+.++++||++.+... ....+.+|++.. +.
T Consensus 342 ~~l~~~~~~i~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~g~~~~~i~l~Ppl~it~ 421 (447)
T PRK06917 342 QKVQQQSTIIGDVRGKGLLIGVEFVADKKTKQPFSKSQAVASELISVAAKNGLLLYPAVAGQDGKEGDAVIIAPPMTITY 421 (447)
T ss_pred HHHHhcCCCEEEEeecceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHhCCcEEEecccccCCCCCCEEEEECCCcCCH
Confidence 43 443333446677777766210 0145677788899999987532 112478999866 34
Q ss_pred hhHHHHHHHHh
Q 014492 410 EHTDALMECLM 420 (423)
Q Consensus 410 ~~~~~l~~al~ 420 (423)
++.+++.++++
T Consensus 422 ~eid~~~~~l~ 432 (447)
T PRK06917 422 SELDELLSIFA 432 (447)
T ss_pred HHHHHHHHHHH
Confidence 44555554443
No 330
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.63 E-value=6.2e-13 Score=132.68 Aligned_cols=319 Identities=13% Similarity=0.114 Sum_probs=193.6
Q ss_pred CCCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-CC---CC--CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492 91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LK---FP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (423)
Q Consensus 91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~---~~--~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~ 161 (423)
+..++.+||+..+ ...++ .+|++.+++.+ +. +. ..++.....+|-+.+++..+...+.++++++++++++.
T Consensus 50 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGseAve~ 129 (453)
T PRK06943 50 DRDGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAMLAGCTHEPAIELAERLAALTGGTLGHAFFASDGASAVEI 129 (453)
T ss_pred eCCCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCCHHHHHH
Confidence 3457889999776 34444 46888888876 22 11 12344445677788877765434689999999999999
Q ss_pred HHHHhc-------CC-CCeEEEcCCCchhhHHHHHH-CC------------CeEEEecCCCCCC------------CCHH
Q 014492 162 IMRCVL-------DP-GDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKSDFS------------LNVE 208 (423)
Q Consensus 162 ~~~~l~-------~~-gd~Vl~~~p~y~~~~~~~~~-~g------------~~~~~v~~~~~~~------------~d~~ 208 (423)
+++... .+ ..+|+....+|+.....+-. .| ..+..+|.++... -+++
T Consensus 130 AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 209 (453)
T PRK06943 130 ALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALA 209 (453)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHH
Confidence 998541 12 36789888888754422211 11 0122233211111 1246
Q ss_pred HHHHHhhc--CCceEEEEcC-CCCCcCcCC-CHHHHH---HHHcC-CCEEEEccCCccccCCCchh--hhhccCCcEEEE
Q 014492 209 LIADAVER--EKPKCIFLTS-PNNPDGSII-NDEDLL---KILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVL 278 (423)
Q Consensus 209 ~l~~~i~~--~~~~~i~l~~-p~NPtG~~~-~~~~l~---~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~i 278 (423)
++++.+.. .++.+|++.. .+...|.+. +.+.++ ++|+. |+++|.||++..|...+... ...+..+.+++
T Consensus 210 ~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv~PDivt- 288 (453)
T PRK06943 210 DVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGVWPDFLC- 288 (453)
T ss_pred HHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCCCCCCeEe-
Confidence 77777742 4678888886 367678755 555444 45555 99999999998885433221 22233344443
Q ss_pred ccChhhhcccC-ccccccccCHHHHHHHHH--------hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHH
Q 014492 279 RTFSKRAGLAG-LRVGYGAFPLSIIEYLWR--------AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKL 349 (423)
Q Consensus 279 ~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~--------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~ 349 (423)
++|.++ .| +.+|.+++++++.+.+.. ....|+.++++.+++.+.|+--+ -+...++.++.-+++.+.
T Consensus 289 --~gKgl~-gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~-~~~l~~~~~~~G~~l~~~ 364 (453)
T PRK06943 289 --LSKGIS-GGYLPLSLVLSRDAIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFA-EDDVLARNARKSARLRAA 364 (453)
T ss_pred --eehhhc-cCcccceEEEEcHHHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHH
Confidence 489998 78 599999999999887752 22346778888888887775311 012233334444444444
Q ss_pred Hcc---CCCCeecCCCceEEEEEeCC-CC----CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHH
Q 014492 350 LKD---VPFLNPYPSYSNFILCEVTS-GM----DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMEC 418 (423)
Q Consensus 350 L~~---~~~~~~~p~~~~~~~~~~~~-~~----~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~a 418 (423)
|++ .+.+.-....|.++.+++.. .. ....+.+.+.++||++.+.+ +.+||+.. +.++.+++.++
T Consensus 365 L~~l~~~~~v~~vrG~Gl~~gvel~~~~~~~~~~~~~i~~~~~~~Gll~~~~g-----~~l~~~Ppl~it~~eid~~~~~ 439 (453)
T PRK06943 365 LAPLAAHPQVRHLRQRGTIFAFDVALDGDAARTFSRRFFEAALERELLLRPIG-----TTVYLMPPYVLDDDEIAWLAER 439 (453)
T ss_pred HHHHhcCCCEEeEeccccEEEEEEccCCCcchHHHHHHHHHHHHCCcEEEecC-----CEEEEeCCCcCCHHHHHHHHHH
Confidence 433 34333344667777777742 11 13467788889999997753 46999855 34444444444
Q ss_pred H
Q 014492 419 L 419 (423)
Q Consensus 419 l 419 (423)
+
T Consensus 440 l 440 (453)
T PRK06943 440 T 440 (453)
T ss_pred H
Confidence 4
No 331
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.63 E-value=1.1e-12 Score=127.70 Aligned_cols=290 Identities=13% Similarity=0.117 Sum_probs=183.9
Q ss_pred CCC-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCch-hhHHHHHHCCCeEEEec---
Q 014492 124 YIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT-MYEFDAAVNGAAVVKVP--- 198 (423)
Q Consensus 124 ~~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~-~~~~~~~~~g~~~~~v~--- 198 (423)
..| .++...+|++++++++|.+ .++.+++++.+++++....++|||.| +..+|. .........|+..+.+.
T Consensus 72 d~Yagd~s~~~LE~~vAe~lG~e--~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI~~~Ga~fvDi~~d~ 147 (460)
T PRK13237 72 EAYAGSRNFYHLEETVQEYYGFK--HVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQELNGGIFVDIIIDE 147 (460)
T ss_pred hhhcCCCcHHHHHHHHHHHHCCC--eEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHHHhCCcEEEeeeccc
Confidence 347 6778899999999999974 68889888889998877678999965 444443 33333566788766663
Q ss_pred -------CCCCCCCCHHHHHHHhhcC---CceEEEEcCCCCCc-CcCCCH---HHHHHHHcC-CCEEEEccCCcccc---
Q 014492 199 -------RKSDFSLNVELIADAVERE---KPKCIFLTSPNNPD-GSIIND---EDLLKILEM-PILVVLDEAYTEFS--- 260 (423)
Q Consensus 199 -------~~~~~~~d~~~l~~~i~~~---~~~~i~l~~p~NPt-G~~~~~---~~l~~i~~~-~~~li~Deay~~~~--- 260 (423)
.+..+.+|++++++.|++. +++++.+.+++|.. |...|. +++.++|+. |+.||+|.++....
T Consensus 148 a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~f 227 (460)
T PRK13237 148 AHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENAYF 227 (460)
T ss_pred ccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcChhh
Confidence 1246789999999999742 34467777788888 688865 455555655 99999999986331
Q ss_pred -------CCCchhh----hhccCCcEEEEccChhhhcccCcccccccc-CHHHHHHHHHhcCCC-------CCcHHHHHH
Q 014492 261 -------GLESRME----WVKKHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQPY-------NVSVAAEVA 321 (423)
Q Consensus 261 -------~~~~~~~----~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~-~~~~~~~l~~~~~~~-------~~~~~~~~a 321 (423)
+.+..+. ....+ ...++.|++|.++.+ . -|+++. ++++.++++...-.+ +++.--..+
T Consensus 228 I~~re~~y~~~~i~ei~~e~~s~-aD~~t~S~~K~~~~~-~-GG~i~t~D~eL~~~~r~~~~~~eG~~tygg~~grd~~a 304 (460)
T PRK13237 228 IKEREEGYQDKSIKEIVHEMFSY-ADGCTMSGKKDCLVN-I-GGFLAMNDEELFDEAKELVVVYEGMPSYGGMAGRDMEA 304 (460)
T ss_pred hcccccccCCCcHhHHhhhccCc-CcEEEEeCCCCCCCC-C-ceEEEECCHHHHHHHHHhccccCCCcCCCChhhhHHHH
Confidence 1111111 01112 236667799987654 1 277776 577888887764322 233323333
Q ss_pred HHHHhCChHHHH-HHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeC--------CCCCHHHHHHHHH-hCCcEEE
Q 014492 322 ACAALQNPIYLE-KVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVT--------SGMDAKKLKDDLA-KMGVMIR 391 (423)
Q Consensus 322 ~~~~l~~~~~~~-~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~--------~~~~~~~l~~~L~-~~gI~v~ 391 (423)
+...|.+ +.+ ...++.-.+.++|.+.|.+.+.-.+.|.+|.-++++.. ....+..+...|- +.||--.
T Consensus 305 lAvgl~E--~~~~~y~~~ri~~~~~l~~~L~~~Gvpv~~p~ggH~v~vda~~~lph~~~~~~p~~al~~~ly~~~GiR~~ 382 (460)
T PRK13237 305 MAIGIEE--SVQYEYIEHRVGQVRYLGEKLLAAGVPIVEPVGGHAVFLDARRFLPHLPQDQFPAQALAAELYIESGVRSM 382 (460)
T ss_pred HHhHHHh--hchHHHHHHHHHHHHHHHHHHHHCCCceecCCCceEEEEEhHHhCCCCCcccChHHHHHHHHHHHhCcCeE
Confidence 3333332 111 22333334567788888877654556888877777542 1345778887775 7887654
Q ss_pred e-CCC-----C-CC------CCeEEEEec----ChhhHHHHHHHHhhh
Q 014492 392 H-YNN-----K-EL------KGYVRVSVG----KPEHTDALMECLMHL 422 (423)
Q Consensus 392 ~-~~~-----~-~~------~~~iRis~~----~~~~~~~l~~al~~l 422 (423)
. |+. + .. -..+|+++. +..++|.+.+++..+
T Consensus 383 e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~ 430 (460)
T PRK13237 383 ERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKL 430 (460)
T ss_pred eecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHH
Confidence 2 111 1 11 257999975 466678888887765
No 332
>PRK07481 hypothetical protein; Provisional
Probab=99.62 E-value=6.6e-13 Score=132.56 Aligned_cols=319 Identities=16% Similarity=0.188 Sum_probs=191.5
Q ss_pred CCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-CC---CCC---CCCCcchHHHHHHHHHHhC-CCCCcEEEeCCHHHHHH
Q 014492 92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LK---FPY---IYPDPESRRLRAALAKDSG-LESDHILVGCGADELID 160 (423)
Q Consensus 92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~---~~~---~Y~~~g~~~lr~~ia~~~g-~~~~~i~~t~G~~~al~ 160 (423)
.+++.+||+..+ ...++ .+|++.+|+.+ +. +.. .+..+...++-+.|++.++ -..+.++++++++++++
T Consensus 39 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~~~~v~f~~sGsEAve 118 (449)
T PRK07481 39 IDGKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYSTFDGTTHPRAIELSYELIDMFAPEGMRRVFFSSGGSDSVE 118 (449)
T ss_pred CCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhccceecccccCCHHHHHHHHHHHHhcCCCCCCEEEEcCchHHHHH
Confidence 457788999765 23344 46888888876 22 111 2344445567788887763 12468999999999999
Q ss_pred HHHHHhcC-------CC-CeEEEcCCCchhhHHHHHHC-C------------CeEEEecCCCC----CC-CCHHHH----
Q 014492 161 LIMRCVLD-------PG-DKIVDCPPTFTMYEFDAAVN-G------------AAVVKVPRKSD----FS-LNVELI---- 210 (423)
Q Consensus 161 ~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~-g------------~~~~~v~~~~~----~~-~d~~~l---- 210 (423)
.+++.... +| .+|+...-+|++....+... | ..+..++.+.. +. .|++.+
T Consensus 119 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~ 198 (449)
T PRK07481 119 TALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARIC 198 (449)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHH
Confidence 99884321 23 57888888887644322221 1 11222332111 11 244443
Q ss_pred ----HHHhh---cCCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEE
Q 014492 211 ----ADAVE---REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLI 276 (423)
Q Consensus 211 ----~~~i~---~~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i 276 (423)
++.+. ..++.+|++...+.-.|.+.+ .++++++|+. |+++|.||++..|...+.. ....+..+.++
T Consensus 199 ~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv 278 (449)
T PRK07481 199 ARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPDIM 278 (449)
T ss_pred HHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCCCCCEE
Confidence 33332 246888888877776787665 3455666665 9999999999987543321 11222233333
Q ss_pred EEccChhhhcccC-ccccccccCHHHHHHHHHh---------cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Q 014492 277 VLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA---------KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERL 346 (423)
Q Consensus 277 ~i~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~~---------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l 346 (423)
+++|.++ .| +.+|.+++++++.+.+... ...|+.++++.+++.+.|+.-+ -+...++.++.-+++
T Consensus 279 ---~~gKgl~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~l~-~~~l~~~~~~~g~~l 353 (449)
T PRK07481 279 ---CLAKGIT-SGYVPLGATMVNARIADAFEANADFGGAIMHGYTYSGHPVACAAALATLDIVV-REDLPANAAKRGAYL 353 (449)
T ss_pred ---EEeeccc-CCCcCceEEEEcHHHHHHHhccCccccccccCCCCCCCHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHH
Confidence 3589987 67 5899999999988877531 2346778888888888775311 012333444444444
Q ss_pred HHHHcc----CCCCeecCCCceEEEEEeCCC------CC-----HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---C
Q 014492 347 FKLLKD----VPFLNPYPSYSNFILCEVTSG------MD-----AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---K 408 (423)
Q Consensus 347 ~~~L~~----~~~~~~~p~~~~~~~~~~~~~------~~-----~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~ 408 (423)
.+.|++ .+.+.-..+.|.++.+++... .+ ...+.+.+.++||++.+.+ +.+||+.. +
T Consensus 354 ~~~L~~l~~~~~~i~~vrG~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g-----~~i~l~Ppl~it 428 (449)
T PRK07481 354 LEGLQPLKERFELVGDVRGKGLMLALDLVADKATREPIDPSKGYANAVADVARENGVLVRPSG-----TKIILSPPLVIQ 428 (449)
T ss_pred HHHHHHHhhcCCCeEEEeecceEEEEEecccccccCCCCchhHHHHHHHHHHHhCCeEEEecC-----CEEEEECCCCCC
Confidence 444443 443333446677777777321 01 3456777889999998753 35899865 4
Q ss_pred hhhHHHHHHHHh
Q 014492 409 PEHTDALMECLM 420 (423)
Q Consensus 409 ~~~~~~l~~al~ 420 (423)
.++.+++.++++
T Consensus 429 ~~eid~~~~~l~ 440 (449)
T PRK07481 429 REDVDRIVDALD 440 (449)
T ss_pred HHHHHHHHHHHH
Confidence 555555555554
No 333
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.60 E-value=8.8e-13 Score=131.99 Aligned_cols=320 Identities=12% Similarity=0.121 Sum_probs=192.7
Q ss_pred CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCC---C--CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF---P--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (423)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~---~--~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~ 161 (423)
..+++.++|+..+. ..++ .+|++.+++.+ +.. . ..|..+...+|-+.+++......+.++++++++++++.
T Consensus 43 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~ 122 (466)
T PRK07030 43 DFEGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVILAGFSHEPVIELSERLVKITPPGLSRCFYADNGSSAIEV 122 (466)
T ss_pred ECCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHH
Confidence 34577899997763 3333 36888888876 221 1 12343445567777777664334689999999999999
Q ss_pred HHHHhc------C-C-CCeEEEcCCCchhhHHHHHH-CCC------------eEEEecCCCCC----CC--------CHH
Q 014492 162 IMRCVL------D-P-GDKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDF----SL--------NVE 208 (423)
Q Consensus 162 ~~~~l~------~-~-gd~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~----~~--------d~~ 208 (423)
+++... . + ..+|+....+|+.....+.. .|. .+..+|....+ +. +++
T Consensus 123 AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~ 202 (466)
T PRK07030 123 ALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFA 202 (466)
T ss_pred HHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHH
Confidence 998542 1 2 35788888888765433322 111 12333321111 11 245
Q ss_pred HHHHHhhc--CCceEEEEcC-CCCCcCcCCC-HHH---HHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEEE
Q 014492 209 LIADAVER--EKPKCIFLTS-PNNPDGSIIN-DED---LLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVL 278 (423)
Q Consensus 209 ~l~~~i~~--~~~~~i~l~~-p~NPtG~~~~-~~~---l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i 278 (423)
.+++.+.+ .++.+|++.. .+.-.|.+.+ .+. ++++|+. |+++|.||++..|...+.. ....+..+.+++
T Consensus 203 ~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv~PDiv~- 281 (466)
T PRK07030 203 HMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGIRPDFLC- 281 (466)
T ss_pred HHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCCCCCEEe-
Confidence 66777742 4677888875 4665677554 444 4555665 9999999999888543321 122223344443
Q ss_pred ccChhhhcccC-ccccccccCHHHHHHHHH---------hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH
Q 014492 279 RTFSKRAGLAG-LRVGYGAFPLSIIEYLWR---------AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFK 348 (423)
Q Consensus 279 ~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~---------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~ 348 (423)
++|.++ .| +.+|.+++++++.+.+.. ....|+.++++.+++.+.|+--+ -+...++.++.-+++.+
T Consensus 282 --~gKgl~-gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~-~~~l~~~~~~~G~~l~~ 357 (466)
T PRK07030 282 --LSKALT-GGYLPLAAVLTTDTVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFE-QDNVIENNRALARRMAE 357 (466)
T ss_pred --eehhcc-CCcccceEEEecHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHH
Confidence 489998 78 499999999999887642 22346778998888888875311 11233444444555555
Q ss_pred HHcc---CCCCeecCCCceEEEEEeCCCC--------C---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHH
Q 014492 349 LLKD---VPFLNPYPSYSNFILCEVTSGM--------D---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDA 414 (423)
Q Consensus 349 ~L~~---~~~~~~~p~~~~~~~~~~~~~~--------~---~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~ 414 (423)
.|++ .+.+.-....|.++.+++.+.. + ...+.+.+.++||++.+.+ +.+|+......+.++
T Consensus 358 ~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g-----~~i~~~Ppl~it~~e 432 (466)
T PRK07030 358 ATAHLADHPHVAEVRQTGMILAIEMVQDKASKTPYPWQERRGLKVYQHALERGALLRPLG-----SVVYFLPPYVITPEQ 432 (466)
T ss_pred HHHHHhcCCCEEEeEeceeEEEEEeccCccccccCcchhHHHHHHHHHHHHCCeEEEecC-----CEEEEECCccCCHHH
Confidence 5543 3433324566777777774211 1 2457778889999998743 579998653222344
Q ss_pred HHHHHh
Q 014492 415 LMECLM 420 (423)
Q Consensus 415 l~~al~ 420 (423)
+.++++
T Consensus 433 id~~~~ 438 (466)
T PRK07030 433 IDFLAE 438 (466)
T ss_pred HHHHHH
Confidence 444443
No 334
>PRK15029 arginine decarboxylase; Provisional
Probab=99.60 E-value=1.1e-12 Score=135.83 Aligned_cols=167 Identities=16% Similarity=0.108 Sum_probs=129.1
Q ss_pred CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC-CCC--
Q 014492 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDF-- 203 (423)
Q Consensus 127 ~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~-- 203 (423)
|..-..+.++..|+.||.+ ...+++||++.++..++.+++++||+|+++..+|-+....+.+.|++++.++.. +.+
T Consensus 203 p~G~I~eAq~~aA~~fgA~-~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~~~~Gi 281 (755)
T PRK15029 203 HTGAFGESEKYAARVFGAD-RSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSRNRYGI 281 (755)
T ss_pred CCcHHHHHHHHHHHHhCCC-cEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccCC
Confidence 3333678999999999964 678999999999999999999999999999999998888999999999999732 222
Q ss_pred --CCC-----HHHHHHHhhc-CCce--------EEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCcccc-CCCch
Q 014492 204 --SLN-----VELIADAVER-EKPK--------CIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLESR 265 (423)
Q Consensus 204 --~~d-----~~~l~~~i~~-~~~~--------~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~-~~~~~ 265 (423)
.++ ++.+++++.+ +..| ++++++|+. .|.+++.+++.++++. ++.|++||||..+. +.+..
T Consensus 282 ~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~~~ 360 (755)
T PRK15029 282 IGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIY 360 (755)
T ss_pred ccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeCHHHHHHHHHhcCCeEEEECccccccccCccc
Confidence 334 8999998853 2233 899999987 7999999999999987 99999999997543 33211
Q ss_pred h--hhh-----c-cCCcEEEEccChhhhcccCcccc-cccc
Q 014492 266 M--EWV-----K-KHDNLIVLRTFSKRAGLAGLRVG-YGAF 297 (423)
Q Consensus 266 ~--~~~-----~-~~~~~i~i~S~SK~~g~~G~R~G-~i~~ 297 (423)
. ..+ . ....++++.|.+|.+ +++.-| ++..
T Consensus 361 p~~sa~~~~~~~~~Gad~~vvqStHKtL--~alTQaS~LHv 399 (755)
T PRK15029 361 ADHYAMRGEPGDHNGPTVFATHSTHKLL--NALSQASYIHV 399 (755)
T ss_pred cccccccccccccCCCceEEEEchhhcc--cchhhhhhhee
Confidence 1 111 1 223359999999975 566655 4444
No 335
>PLN02263 serine decarboxylase
Probab=99.60 E-value=7.3e-13 Score=130.16 Aligned_cols=273 Identities=12% Similarity=-0.008 Sum_probs=182.4
Q ss_pred HHHHHHHHHhCCCCC--cEEEeCCHHHHHHHHHHHhcC--CCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHH
Q 014492 133 RLRAALAKDSGLESD--HILVGCGADELIDLIMRCVLD--PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVE 208 (423)
Q Consensus 133 ~lr~~ia~~~g~~~~--~i~~t~G~~~al~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~ 208 (423)
++-+.+++.+|.+++ .-++|+|+++++-.++.+-.+ +...++++.-+|.++...++..|++++.||.++++.+|++
T Consensus 137 ~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d~~g~mD~~ 216 (470)
T PLN02263 137 GVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDTLVSGEIDCA 216 (470)
T ss_pred HHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhcCCcceEeccCCCCcCcHH
Confidence 355555666788653 467899999998877765432 3346888999999999999999999999999888999999
Q ss_pred HHHHHhhcCC--ceEEEEcCCCCCcCcCCCHHHHHHHHcC-CC-----EEEEccCCccccC----CCchhhhhccCCcEE
Q 014492 209 LIADAVEREK--PKCIFLTSPNNPDGSIINDEDLLKILEM-PI-----LVVLDEAYTEFSG----LESRMEWVKKHDNLI 276 (423)
Q Consensus 209 ~l~~~i~~~~--~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~-----~li~Deay~~~~~----~~~~~~~~~~~~~~i 276 (423)
+|++++.+.. |-+|+.+-++.++|.+=|++++.++++. |+ |+.+|.+|+.+.. ....... ..+-.=
T Consensus 217 aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~~~df--~~~vDS 294 (470)
T PLN02263 217 DFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAPKVTF--KKPIGS 294 (470)
T ss_pred HHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcccccccCC--CcCccE
Confidence 9999996433 5567677889999999999999999986 75 9999999986542 1011111 111223
Q ss_pred EEccChhhhcccCccccccccCHHHHHHHHHhc------C-CC--CCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHH
Q 014492 277 VLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK------Q-PY--NVSVAAEVAACAALQN--PIYLEKVKEALIKERER 345 (423)
Q Consensus 277 ~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~------~-~~--~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~ 345 (423)
+.-+++| |+.....+|.++.....++.+.... . .. +-+......+...|+. .+.+.+..++..++.++
T Consensus 295 IsvD~HK-~l~~P~~cgvll~R~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~~L~~~G~~G~~~~i~~~~~~A~~ 373 (470)
T PLN02263 295 VSVSGHK-FVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHY 373 (470)
T ss_pred EEECCcc-ccCCCcCEEEEEEehhhHhhhccChHhhCCCCCCcCCCCCcHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 4557789 4457788898888765544332110 0 11 1121223334444443 34577788888889999
Q ss_pred HHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014492 346 LFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH 421 (423)
Q Consensus 346 l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~ 421 (423)
+.+.|++.+......+..+.+.+.-|. ++ ...+|..+... ++.++|.+...-+.+.+.+.++.
T Consensus 374 l~~~l~~~g~~~~~~p~s~~V~f~~p~----~~----~~~~gW~L~~~-----~~~~Hivvmphv~~~~id~fi~D 436 (470)
T PLN02263 374 LKDRLREAGISAMLNELSSTVVFERPK----DE----EFVRRWQLACQ-----GNIAHVVVMPSVTIEKLDYFLKE 436 (470)
T ss_pred HHHHHHhCCCeEEeCCCceEEEEecCc----hH----HhhcceEEccC-----CCcEEEEEcCCCCHHHHHHHHHH
Confidence 999999887655555666767666541 11 12355555542 35689998753233444444443
No 336
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.60 E-value=5.7e-13 Score=133.11 Aligned_cols=315 Identities=17% Similarity=0.131 Sum_probs=185.2
Q ss_pred CCCCCCeeEcCCCCC--CCC-CCHHHHHHHhc-CCCCCC--CCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHH
Q 014492 91 GRKPEDIVKIDANEN--PYG-PPPEVREALGQ-LKFPYI--YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (423)
Q Consensus 91 ~~~~~~~i~l~~~~~--~~~-~~~~v~~al~~-~~~~~~--Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~ 164 (423)
+.+++.+||+..+.. .++ .+|+|.+++.+ +..... ++.....+|-+.+++.+.- .+.+.++++++|+...+++
T Consensus 95 D~dG~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~~~~~~~~~~~~~~~lAe~l~~~~p~-~~~v~f~~SGsEA~e~Alk 173 (474)
T PLN02482 95 DVDGNEYIDYVGSWGPAIIGHADDEVLAALAETMKKGTSFGAPCLLENVLAEMVIDAVPS-VEMVRFVNSGTEACMGVLR 173 (474)
T ss_pred ECCCCEEEEecccccccccCCCCHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHHHhCCC-CCEEEEeCChHHHHHHHHH
Confidence 345778899876643 343 36888888876 332222 2333345677777776642 4799999999999999988
Q ss_pred Hhc--CCCCeEEEcCCCchhhHHH--HHH-CCC-----------------eEEEecCCCCCCCCHHHHHHHhhc--CCce
Q 014492 165 CVL--DPGDKIVDCPPTFTMYEFD--AAV-NGA-----------------AVVKVPRKSDFSLNVELIADAVER--EKPK 220 (423)
Q Consensus 165 ~l~--~~gd~Vl~~~p~y~~~~~~--~~~-~g~-----------------~~~~v~~~~~~~~d~~~l~~~i~~--~~~~ 220 (423)
... ...++|+....+|++.... ... .|. .++.+| + -|++.+++.+.+ .++.
T Consensus 174 lAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----~-nd~~~l~~~l~~~~~~iA 248 (474)
T PLN02482 174 LARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAP----Y-NDLEAVKKLFEANKGEIA 248 (474)
T ss_pred HHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEec----C-CChHHHHHHHHhCCCceE
Confidence 432 1236788888888764421 111 010 011111 1 278889888853 3577
Q ss_pred EEEEcCCCCCcCcCCCHH----HHHHHHcC-CCEEEEccCCccccCCCch-hhhhccCCcEEEEccChhhhcccCccccc
Q 014492 221 CIFLTSPNNPDGSIINDE----DLLKILEM-PILVVLDEAYTEFSGLESR-MEWVKKHDNLIVLRTFSKRAGLAGLRVGY 294 (423)
Q Consensus 221 ~i~l~~p~NPtG~~~~~~----~l~~i~~~-~~~li~Deay~~~~~~~~~-~~~~~~~~~~i~i~S~SK~~g~~G~R~G~ 294 (423)
+|++.......|.+.+.+ .+.+||+. |+++|+||++..|..+... ....+..+.+ .+++|.+| .|+.+|.
T Consensus 249 avI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGfR~g~~ga~~~~gv~PDi---~t~gK~lg-gG~Piga 324 (474)
T PLN02482 249 AVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGFRIAYGGAQEYFGITPDL---TTLGKVIG-GGLPVGA 324 (474)
T ss_pred EEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCeecCcchHhHHhCCCCCE---EEecchhh-CCCceEE
Confidence 888887777789877744 46677776 9999999999877332111 1112222332 46799998 8899999
Q ss_pred cccCHHHHHHHHHhc-----CCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc----CCCCee-cCCCce
Q 014492 295 GAFPLSIIEYLWRAK-----QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKD----VPFLNP-YPSYSN 364 (423)
Q Consensus 295 i~~~~~~~~~l~~~~-----~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~-~p~~~~ 364 (423)
+++++++++.+.... ..|+.++++..++.+.|+.-+- +...++++++-++|.+.|++ .+...+ ..-.+
T Consensus 325 v~g~~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~-~~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v~g- 402 (474)
T PLN02482 325 YGGRREIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQ-PGTYEYLDKITKKLIQGILEAGKKAGHEMCGGYISG- 402 (474)
T ss_pred EEEcHHHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhc-cCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEcccce-
Confidence 999999998875321 2355678887777777653110 12344444445555555543 321111 12233
Q ss_pred EEEEEeCC--C--------CC---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHhh
Q 014492 365 FILCEVTS--G--------MD---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLMH 421 (423)
Q Consensus 365 ~~~~~~~~--~--------~~---~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~~ 421 (423)
++.+.+.+ . .+ ...+.+.|.++||++.+..... ++ +++. ++++++++.+++++
T Consensus 403 ~~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~~Gv~~~~~~~~~--~~--psl~ht~~dId~~l~al~~ 469 (474)
T PLN02482 403 MFGFFFTEGPVYNFADAKKSDTAKFARFHRGMLEEGVYLAPSQFEA--GF--TSLAHTEEDIDFTIAAAER 469 (474)
T ss_pred EEEEEEecCCccChhhhccCCHHHHHHHHHHHHHCCeEEeccCCCC--Cc--CCCCCCHHHHHHHHHHHHH
Confidence 32333311 0 11 2457778889999998754311 12 3332 34455555555543
No 337
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.59 E-value=2.5e-12 Score=127.52 Aligned_cols=297 Identities=19% Similarity=0.185 Sum_probs=185.1
Q ss_pred CCHHHHHHHhcC-C-CC-CCC--C--Cc--chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCC
Q 014492 109 PPPEVREALGQL-K-FP-YIY--P--DP--ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179 (423)
Q Consensus 109 ~~~~v~~al~~~-~-~~-~~Y--~--~~--g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~ 179 (423)
.++++.+++.+. . +. ..| . .. ....+++.+++++|.+. .+++++++.++.+++. .+.+||+|++....
T Consensus 93 l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~gae~--alvv~sg~aAi~l~l~-~l~~GdeVIvs~~e 169 (454)
T TIGR00474 93 LAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELTGAED--ALVVNNNAAAVLLALN-TLAKGKEVIVSRGE 169 (454)
T ss_pred CCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHH-HhCCcCEEEECCCh
Confidence 468888888763 1 11 112 1 11 24789999999999743 4456666678888886 46889999998876
Q ss_pred chh------hHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCc--C--cCCCHHHHHHHHcC-CC
Q 014492 180 FTM------YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPD--G--SIINDEDLLKILEM-PI 248 (423)
Q Consensus 180 y~~------~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPt--G--~~~~~~~l~~i~~~-~~ 248 (423)
|.. +....+..|++++.++.++ ..|++++++++. +++++|++.+++|++ | .+.+.+++.++|+. |+
T Consensus 170 ~v~~ggs~~i~~~~~~~G~~~~~v~~~~--~~~l~dle~aI~-~~T~lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~ 246 (454)
T TIGR00474 170 LVEIGGSFRIPDVMEQSGAKLVEVGTTN--RTHLKDYEDAIT-ENTALLLKVHTSNYRIVGFTEEVSIAELVALGREHGL 246 (454)
T ss_pred hhhhcchhhHHHHHHHcCCEEEEeCCCC--CCCHHHHHHhcC-cCCEEEEEEccCcccccCCCCCCCHHHHHHHHHHcCC
Confidence 432 2345667899999997532 457999999997 789999999999995 6 57899999999997 99
Q ss_pred EEEEccCCccccCC------Cch-hhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC--CCCCcHHHH
Q 014492 249 LVVLDEAYTEFSGL------ESR-MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAE 319 (423)
Q Consensus 249 ~li~Deay~~~~~~------~~~-~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~--~~~~~~~~~ 319 (423)
++++|.....+... ..+ .......+..+++.|.+|.+|.+ ..|++++++++++++.+..- ...+.-...
T Consensus 247 ~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp--~~G~i~g~~~~i~~l~~~~l~r~lr~~k~~l 324 (454)
T TIGR00474 247 PVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGP--QAGIIVGKKELIERLKKNPLTRALRVDKLTL 324 (454)
T ss_pred eEEEECCCcccccchhccCCCCcccccHhHcCCCEEEecCccccCCC--eEEEEEECHHHHHhhhhchhHHHHhhChHHH
Confidence 99999864322110 011 11122344569999999987534 47999999988876543211 011222222
Q ss_pred HHHHH----HhCCh-HH--------HHHHHHHHHHHHHHHHHHHccC--CCC--eecCC-----Cc---------eEEEE
Q 014492 320 VAACA----ALQNP-IY--------LEKVKEALIKERERLFKLLKDV--PFL--NPYPS-----YS---------NFILC 368 (423)
Q Consensus 320 ~a~~~----~l~~~-~~--------~~~~~~~~~~~~~~l~~~L~~~--~~~--~~~p~-----~~---------~~~~~ 368 (423)
.+..+ ++... .| +....++++++..++.+.|++. +.+ .+.+. +| .-+.+
T Consensus 325 a~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~ggg~~p~~~l~~~~v~~ 404 (454)
T TIGR00474 325 AALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAALGPGFELEIVPGLSQVGGGSLPDERLPSYAVTL 404 (454)
T ss_pred HHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhccCCceEEEEEcCCcccCCCCcCCCCCeEEEEE
Confidence 22222 22211 12 2233456677888888888764 222 12211 11 12233
Q ss_pred EeCCCCCHHHHHHHHHhCC--cEEEeCCCCCCCCeEEEEecC--hhhHHHHHHHH
Q 014492 369 EVTSGMDAKKLKDDLAKMG--VMIRHYNNKELKGYVRVSVGK--PEHTDALMECL 419 (423)
Q Consensus 369 ~~~~~~~~~~l~~~L~~~g--I~v~~~~~~~~~~~iRis~~~--~~~~~~l~~al 419 (423)
+ +.+.++.++.+.|++.. |+.+- .++.+-+-+.+ +++.+.+.+++
T Consensus 405 ~-~~~~~~~~l~~~lr~~~~~ii~r~-----~~~~~~ld~r~~~~~~~~~~~~~~ 453 (454)
T TIGR00474 405 T-PDGLSAEKLEARLRELPPPIIGRI-----EDDRFLLDLRTLLEDEEELLIEAL 453 (454)
T ss_pred e-cCCCCHHHHHHHHhcCCCCEEEEE-----ECCEEEEEeCcCCHHHHHHHHHHh
Confidence 3 23678899999998655 44442 24667777654 34445555544
No 338
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.58 E-value=2.1e-12 Score=137.90 Aligned_cols=319 Identities=13% Similarity=0.056 Sum_probs=195.6
Q ss_pred CeeEcCCCCCCCCCCHHHHHHHhcCC---CCCCC-CC---cc----hHHHHHHHHHHhCCCCCcEEEeC-CHHHHHHH--
Q 014492 96 DIVKIDANENPYGPPPEVREALGQLK---FPYIY-PD---PE----SRRLRAALAKDSGLESDHILVGC-GADELIDL-- 161 (423)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~~---~~~~Y-~~---~g----~~~lr~~ia~~~g~~~~~i~~t~-G~~~al~~-- 161 (423)
.+|.|+...+.+ .|.+...+.... ..+-| |. .| ..++.+.+++.+|.+ ++.+.. |++++...
T Consensus 500 ~~i~lGsct~~~--~p~~~~~~~~~~~f~~~hP~qp~e~~qG~l~~i~e~q~~l~eltG~d--~~sl~~~~ga~ge~agL 575 (954)
T PRK05367 500 SMIPLGSCTMKL--NAAAEMIPITWPEFANLHPFAPAEQAAGYRELIDQLEAWLAEITGYD--AVSLQPNAGAQGEYAGL 575 (954)
T ss_pred ceeeCCcCCCcC--CHHHHHHHHhCccccccCCCChHHHHHHHHHHHHHHHHHHHHHHCCC--CEEECccHHHHHHHHHH
Confidence 456677644433 455544444322 11334 31 12 236778888888975 454444 55444423
Q ss_pred -HHHHh-cCCCC----eEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcC--CceEEEEcCCCCCcCc
Q 014492 162 -IMRCV-LDPGD----KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE--KPKCIFLTSPNNPDGS 233 (423)
Q Consensus 162 -~~~~l-~~~gd----~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~--~~~~i~l~~p~NPtG~ 233 (423)
+++.+ ..+|+ +|+++...|......+...|.+++.++.+.++.+|+++|++.+.+. ++.+|++++|++-.+.
T Consensus 576 ~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~v~~d~~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~ 655 (954)
T PRK05367 576 LAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMKVVVVACDENGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVF 655 (954)
T ss_pred HHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCEEEEECCCCCCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeee
Confidence 23322 24565 5999999998777888899999999998777799999999999643 5778888899886444
Q ss_pred CCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhccc----CccccccccCHHHHHHHHHh
Q 014492 234 IINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLA----GLRVGYGAFPLSIIEYLWRA 308 (423)
Q Consensus 234 ~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~----G~R~G~i~~~~~~~~~l~~~ 308 (423)
..+.+++.++++. |+++++|.++......-. .....+-+++..+++|.|+.| |-.+|++.+.+.+...+...
T Consensus 656 e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~---~pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg~ 732 (954)
T PRK05367 656 EETIREICEIVHEHGGQVYLDGANMNAQVGLA---RPGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHLAPFLPGH 732 (954)
T ss_pred cCCHHHHHHHHHHcCCEEEEECcChhhccCCC---ChhhcCCCEEEecCcccCCCCcCCCCCceEEEeecccccccCCCC
Confidence 5789999999987 999999999963221111 111334558888999987532 33467777665443332211
Q ss_pred c-----C---CCCC--cHH----HHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCC----ceEEE
Q 014492 309 K-----Q---PYNV--SVA----AEVAACAALQ--NPIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSY----SNFIL 367 (423)
Q Consensus 309 ~-----~---~~~~--~~~----~~~a~~~~l~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~----~~~~~ 367 (423)
. . ...+ +.. ....+..++. ..+.+++..++...+.+++.+.|++.-.+.. .|.+ ..++-
T Consensus 733 ~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~~~~~~~~~~~~~~~e~i~~ 812 (954)
T PRK05367 733 PVQIAGGETGIGAVSAAPFGSASILPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDHYPVLYTGANGRVAHECILD 812 (954)
T ss_pred ccCcCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCcccceEEE
Confidence 0 0 0111 112 1111222222 2355667777667889999999976421111 1111 11222
Q ss_pred E-EeCC--CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492 368 C-EVTS--GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL 422 (423)
Q Consensus 368 ~-~~~~--~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l 422 (423)
+ .++. +.+..++.++|.++|+.....+ +...+.+||+++ +.+|.|+|.++++.|
T Consensus 813 ~~~~~~~~g~~~~di~krL~d~G~~~~t~~-~pv~~~l~i~ptE~~s~~elDr~~~al~~i 872 (954)
T PRK05367 813 LRPLKESTGITVDDIAKRLIDYGFHAPTMS-FPVAGTLMVEPTESESKAELDRFCDAMIAI 872 (954)
T ss_pred eecccccCCCCHHHHHHHHHHCCCeEeecC-CccCCEEEEEeeecCCHHHHHHHHHHHHHH
Confidence 2 2332 4678999999999999876643 334789999986 456677777777654
No 339
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.58 E-value=2.2e-12 Score=132.39 Aligned_cols=163 Identities=15% Similarity=0.234 Sum_probs=123.5
Q ss_pred hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHH-HHHCCCeEEEecCC-CCC----C
Q 014492 131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD-AAVNGAAVVKVPRK-SDF----S 204 (423)
Q Consensus 131 ~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~-~~~~g~~~~~v~~~-~~~----~ 204 (423)
..+.++..|+.||.+ ...+++||++.++..++.+++.+||.|++...+|-+.... ..+.|++++.++.. +.+ .
T Consensus 176 i~eAq~~AA~~fgAd-~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~n~~Gi~g~ 254 (720)
T PRK13578 176 AKDAQKHAAKVFNAD-KTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQAGATPVYLETARNPFGFIGG 254 (720)
T ss_pred HHHHHHHHHHHhCCC-ceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHHcCCeEEEeeccccccCCcCC
Confidence 568899999999964 5788999999999999999999999999999999887774 78899999998743 222 3
Q ss_pred CCH-----HHHHHHhhcC--------C-ceEEEEcCCCCCcCcCCCHHHHHHHH-cC-CCEEEEccCCcccc-CCCc---
Q 014492 205 LNV-----ELIADAVERE--------K-PKCIFLTSPNNPDGSIINDEDLLKIL-EM-PILVVLDEAYTEFS-GLES--- 264 (423)
Q Consensus 205 ~d~-----~~l~~~i~~~--------~-~~~i~l~~p~NPtG~~~~~~~l~~i~-~~-~~~li~Deay~~~~-~~~~--- 264 (423)
++. +.+++++.+. + .++++|++|+. .|.+++.+++.+++ +. + .|++||||..+. +.+.
T Consensus 255 I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~ydi~~I~~~~~h~~~-~llvDEAhgah~~F~p~~~~ 332 (720)
T PRK13578 255 IDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIYNARQVVDKIGHLCD-YILFDSAWVGYEQFIPMMAD 332 (720)
T ss_pred CChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceeecHHHHHHHhhccCC-cEEEeCcchhhhccCccccc
Confidence 454 4488888643 1 58999999987 89999999999984 55 6 999999997643 3221
Q ss_pred h----hhhhccCCcEEEEccChhhhcccCcccc-ccccC
Q 014492 265 R----MEWVKKHDNLIVLRTFSKRAGLAGLRVG-YGAFP 298 (423)
Q Consensus 265 ~----~~~~~~~~~~i~i~S~SK~~g~~G~R~G-~i~~~ 298 (423)
. ...-.+.+.++++.|.+|.+ +++.-+ ++...
T Consensus 333 ~p~~al~~GaD~p~i~v~QStHKtL--~alTQaS~LHvk 369 (720)
T PRK13578 333 CSPLLLELNENDPGIFVTQSVHKQQ--AGFSQTSQIHKK 369 (720)
T ss_pred CChhhhhcCCCCCCeEEEEChhhcc--hhhhhHhhhhcC
Confidence 1 11111234569999999975 566544 55553
No 340
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.58 E-value=1.8e-12 Score=129.68 Aligned_cols=320 Identities=12% Similarity=0.131 Sum_probs=192.7
Q ss_pred CCCCCCeeEcCCC--CCCCC-CCHHHHHHHhcC----CCCC--CCCCcchHHHHHHHHHHhCC-----CCCcEEEeCCHH
Q 014492 91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQL----KFPY--IYPDPESRRLRAALAKDSGL-----ESDHILVGCGAD 156 (423)
Q Consensus 91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~~----~~~~--~Y~~~g~~~lr~~ia~~~g~-----~~~~i~~t~G~~ 156 (423)
..+++.+||+..+ ...++ .+|++.+++.+. .+.. .++.+...+|-+.+++...- ..+.++++++++
T Consensus 60 D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGS 139 (472)
T PRK08742 60 GHDGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQVMLAGFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGS 139 (472)
T ss_pred eCCCCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCch
Confidence 3557789999777 33343 468888888652 2211 23443455677777776642 236899999999
Q ss_pred HHHHHHHHHhcC-------C-CCeEEEcCCCchhhHHHHHHC-CC------------eEEEecCCCCC----CC------
Q 014492 157 ELIDLIMRCVLD-------P-GDKIVDCPPTFTMYEFDAAVN-GA------------AVVKVPRKSDF----SL------ 205 (423)
Q Consensus 157 ~al~~~~~~l~~-------~-gd~Vl~~~p~y~~~~~~~~~~-g~------------~~~~v~~~~~~----~~------ 205 (423)
++++.+++.... + ..+|+....+|++....+... |. .+..+|..+.+ +.
T Consensus 140 EAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~ 219 (472)
T PRK08742 140 AGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYA 219 (472)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHHHHH
Confidence 999999885421 2 267888888887554333221 11 12333321111 11
Q ss_pred --CHHHHHHHhhc--CCceEEEEcC-CCCCcCcCC-CHHHHHH---HHcC-CCEEEEccCCccccCCCch--hhhhccCC
Q 014492 206 --NVELIADAVER--EKPKCIFLTS-PNNPDGSII-NDEDLLK---ILEM-PILVVLDEAYTEFSGLESR--MEWVKKHD 273 (423)
Q Consensus 206 --d~~~l~~~i~~--~~~~~i~l~~-p~NPtG~~~-~~~~l~~---i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~ 273 (423)
+++.+++.+.. .++.+|++.. .++-.|.+. +.+.+++ +|+. |+++|.||++..|...+.. ....+..+
T Consensus 220 ~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv~P 299 (472)
T PRK08742 220 LQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGVMP 299 (472)
T ss_pred HHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHHHhcCCCC
Confidence 25666776642 4677888875 466678755 4554544 5554 9999999999988643322 12222334
Q ss_pred cEEEEccChhhhcccC-ccccccccCHHHHHHHHH--------hcCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHH
Q 014492 274 NLIVLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWR--------AKQPYNVSVAAEVAACAALQN---PIYLEKVKEALIK 341 (423)
Q Consensus 274 ~~i~i~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~--------~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~ 341 (423)
.+++ ++|.++ .| +.+|.+++++++.+.+.. ....|+.++++.+++.+.|+- ++.+++..+.-..
T Consensus 300 Div~---~gKgl~-gG~~Plaav~~~~ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~~~~l~~~~~~~g~~ 375 (472)
T PRK08742 300 DLLC---LSKGLT-GGFLPLSAVLATQQLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFADDDVIARNQPTAAR 375 (472)
T ss_pred CEEE---Eccccc-CCCCCcceeeccHHHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 4443 489987 78 489999999999887642 123467788888888887753 2222332222222
Q ss_pred HHHHHHHHHccCCCCeecCCCceEEEEEeCCC-C-----C-----HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---
Q 014492 342 ERERLFKLLKDVPFLNPYPSYSNFILCEVTSG-M-----D-----AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG--- 407 (423)
Q Consensus 342 ~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~-~-----~-----~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~--- 407 (423)
.+ .+.+.+++.+.+.-....|.++.+++... . . ...+.+.+.++||++.+.+ +.|||...
T Consensus 376 l~-~~~~~~~~~~~i~dvRG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g-----~vi~~~PpL~i 449 (472)
T PRK08742 376 MT-QLAAQIGEHPHVADVRQAGMVVAFELTRGGNKRTPFPPAARVGLHAYRAALARGVVLRPLG-----DVLYWMPPYCV 449 (472)
T ss_pred HH-HHHHHHhcCCCeeeEeccceEEEEEeccCccccccCCchhHHHHHHHHHHHHCCeEEEecC-----CEEEEECCCCC
Confidence 22 23333455554443456788888877421 0 0 2456777889999998743 58999976
Q ss_pred ChhhHHHHHHHHh
Q 014492 408 KPEHTDALMECLM 420 (423)
Q Consensus 408 ~~~~~~~l~~al~ 420 (423)
++++.+++.+.++
T Consensus 450 t~~ei~~~~~~l~ 462 (472)
T PRK08742 450 DEAQLALLADTTR 462 (472)
T ss_pred CHHHHHHHHHHHH
Confidence 4444444444443
No 341
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.58 E-value=1.8e-12 Score=129.75 Aligned_cols=319 Identities=14% Similarity=0.173 Sum_probs=193.5
Q ss_pred CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CC---CCC--CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LK---FPY--IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (423)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~---~~~--~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~ 161 (423)
+.+++.+||+..+. ..++ .+|+|.+++.+ +. +.. .+......+|-+.|++.+.-..+.++++++++++++.
T Consensus 52 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~ 131 (460)
T PRK06916 52 DVNGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAHSTLLGLANVPSILLAEKLIEVVPEGLKKVFYSDSGATAVEI 131 (460)
T ss_pred eCCCCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHH
Confidence 34578899987663 3333 46888888865 22 111 2344445678888888775334689999999999999
Q ss_pred HHHHhcC-------CC-CeEEEcCCCchhhHHHHHH-CCC------------eEEEecCCCC----CC--------CCHH
Q 014492 162 IMRCVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSD----FS--------LNVE 208 (423)
Q Consensus 162 ~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~----~~--------~d~~ 208 (423)
+++.... +| .+|+....+|++....+.. .|- .+..+|..+. +. -+++
T Consensus 132 AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~ 211 (460)
T PRK06916 132 AIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLE 211 (460)
T ss_pred HHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHH
Confidence 9885431 33 6788888888764433222 111 1233332111 11 1355
Q ss_pred HHHHHhhc--CCceEEEEcC-CCCCcCcCC-CHHHHHHH---HcC-CCEEEEccCCccccCCCchh--hhhccCCcEEEE
Q 014492 209 LIADAVER--EKPKCIFLTS-PNNPDGSII-NDEDLLKI---LEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVL 278 (423)
Q Consensus 209 ~l~~~i~~--~~~~~i~l~~-p~NPtG~~~-~~~~l~~i---~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~i 278 (423)
.+++.++. .++.+|++.. .+.-.|.+. +.+.++++ |+. |+++|.||++..|...+... ...+..+.++
T Consensus 212 ~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~a~~~~gv~PDiv-- 289 (460)
T PRK06916 212 ELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENVTPDIM-- 289 (460)
T ss_pred HHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhhHHHhcCCCCCee--
Confidence 66776642 4678888876 466678764 65555554 554 99999999998775333221 1222233333
Q ss_pred ccChhhhcccC-ccccccccCHHHHHHHHH---------hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH
Q 014492 279 RTFSKRAGLAG-LRVGYGAFPLSIIEYLWR---------AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFK 348 (423)
Q Consensus 279 ~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~---------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~ 348 (423)
+++|.++ .| +.+|.+++++++.+.+.. ....|+.++++..++.+.|+.-+ -+...++.+++-+++.+
T Consensus 290 -~~gK~l~-gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~-~~~l~~~~~~~g~~l~~ 366 (460)
T PRK06916 290 -TAGKGLT-GGYLPIAITVTTDEIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLELYE-KTNLIEQVARKTEYVAT 366 (460)
T ss_pred -eeehhhh-cCccccceeeecHHHHHHhhccccccCccccCCCCCCCHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHH
Confidence 4689998 78 599999999998877642 12246678888888888775311 01234455555555666
Q ss_pred HHccC---CCCeecCCCceEEEEEeCCCC--------C---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---Chhh
Q 014492 349 LLKDV---PFLNPYPSYSNFILCEVTSGM--------D---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEH 411 (423)
Q Consensus 349 ~L~~~---~~~~~~p~~~~~~~~~~~~~~--------~---~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~ 411 (423)
.|+++ +.+.-....|.++.+++.+.. + ...+...+.++||++.+.+ +.+|+... +.++
T Consensus 367 ~l~~l~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g-----~~l~~~Ppl~it~~~ 441 (460)
T PRK06916 367 QLEDLFALKHVGDIRQLGLMVGIELVKNKETKEPFEWTERVGVQVCKRSRELGMLTRPLG-----NTIVFMPPLASTIDE 441 (460)
T ss_pred HHHHhhcCCCeEEeecCCceeeEEeecccccccCCCchhhHHHHHHHHHHHCCeEEEecC-----CEEEEeCCcccCHHH
Confidence 55543 333223455667667663210 1 2467788889999998753 57899865 3444
Q ss_pred HHHHHHHH
Q 014492 412 TDALMECL 419 (423)
Q Consensus 412 ~~~l~~al 419 (423)
.+++.+++
T Consensus 442 id~~~~~l 449 (460)
T PRK06916 442 LDEMLRIL 449 (460)
T ss_pred HHHHHHHH
Confidence 44444444
No 342
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.58 E-value=1.3e-12 Score=137.30 Aligned_cols=284 Identities=15% Similarity=0.119 Sum_probs=184.8
Q ss_pred HHHHHHHHHHhCCCCCcEEEeCCHHHHHHH---HHHHhc-----CCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCC
Q 014492 132 RRLRAALAKDSGLESDHILVGCGADELIDL---IMRCVL-----DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDF 203 (423)
Q Consensus 132 ~~lr~~ia~~~g~~~~~i~~t~G~~~al~~---~~~~l~-----~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~ 203 (423)
.++.+.+++..|.+.-.+....|++ +-.. +++... ...+.|+++.-.|......++..|.+++.+|.+.++
T Consensus 533 ~elq~~l~eltGmd~~Sl~p~aGA~-gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~~~G~~Vv~V~~d~~G 611 (939)
T TIGR00461 533 AQLEKWLCSITGFDAISLQPNSGAQ-GEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAAMAGMQVVPVNCDQDG 611 (939)
T ss_pred HHHHHHHHHHHCCCCcccCCchHHH-HHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHHHCCCEEEEeccCCCC
Confidence 4788888999998743444444443 3332 223211 123578899999977777788899999999987788
Q ss_pred CCCHHHHHHHhhc--CCceEEEEcCCCCCcCcCCC-HHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEc
Q 014492 204 SLNVELIADAVER--EKPKCIFLTSPNNPDGSIIN-DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR 279 (423)
Q Consensus 204 ~~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~~~-~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~ 279 (423)
.+|+++|++.+++ .++++|++++|+| +|.+-+ .+++.++++. |.++++|.++..-.. ........+-++++.
T Consensus 612 ~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~---~l~~Pg~~GaDi~~~ 687 (939)
T TIGR00461 612 NIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQV---GLTSPGDLGADVCHL 687 (939)
T ss_pred CcCHHHHHHHHhhcCCceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCC---CCCCccccCCCEEEe
Confidence 9999999999974 4899999999999 899877 9999999988 899999999853111 111113455679999
Q ss_pred cChhhhcc----cCccccccccCHHHHHHHHHh-----------cC----C---CCCcHHHHHHHHHHhCC--hHHHHHH
Q 014492 280 TFSKRAGL----AGLRVGYGAFPLSIIEYLWRA-----------KQ----P---YNVSVAAEVAACAALQN--PIYLEKV 335 (423)
Q Consensus 280 S~SK~~g~----~G~R~G~i~~~~~~~~~l~~~-----------~~----~---~~~~~~~~~a~~~~l~~--~~~~~~~ 335 (423)
|.+|.|+. .|-.+|++.+.+++...+-.. .+ . ..-+......+..++.. .+.+.+.
T Consensus 688 s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL~~~ 767 (939)
T TIGR00461 688 NLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGSASILPISWMYIKMMGNEGLPKA 767 (939)
T ss_pred cCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCCCCccccccccccccCcHHHHHHHHHHHHHHCHHHHHHH
Confidence 99997652 345578888876544333200 00 0 01111222333333332 4567787
Q ss_pred HHHHHHHHHHHHHHHccCCCCeecCC-CceE---EEEEeCC-----CCCHHHHHHHHHhCCcEEEeCCCCCCCCe--EEE
Q 014492 336 KEALIKERERLFKLLKDVPFLNPYPS-YSNF---ILCEVTS-----GMDAKKLKDDLAKMGVMIRHYNNKELKGY--VRV 404 (423)
Q Consensus 336 ~~~~~~~~~~l~~~L~~~~~~~~~p~-~~~~---~~~~~~~-----~~~~~~l~~~L~~~gI~v~~~~~~~~~~~--iRi 404 (423)
.+..-.+.+++.+.|++.. ..+++. .+.+ +.++++. +.+..++.++|.++|+..-..+ +...+. ||.
T Consensus 768 a~~ailnAnYl~~rL~~~~-~~l~~~~~~~~~hEfv~~~~~~~~~~g~~~~dIakrL~d~G~hapt~~-~pv~g~lmiep 845 (939)
T TIGR00461 768 SVVAILNANYMATRLKDHY-PILFVGTLKHVAHECILDLRPLKAKTGIEAIDVAKRLQDYGFHAPTLS-FPVPGTLMVEP 845 (939)
T ss_pred HHHHHHHHHHHHHHhhccC-cccccCCCCceeEEEEEeccchhhhcCCCHHHHHHHHHhCCeeccccC-CccCCeEEEEe
Confidence 8877889999999998732 223332 2221 3345542 4678999999999998754433 233444 444
Q ss_pred Eec-ChhhHHHHHHHHhhh
Q 014492 405 SVG-KPEHTDALMECLMHL 422 (423)
Q Consensus 405 s~~-~~~~~~~l~~al~~l 422 (423)
+-. +.+++|+|.+++..|
T Consensus 846 TE~eskeelD~f~~al~~I 864 (939)
T TIGR00461 846 TESESLEELDRFCDAMIAI 864 (939)
T ss_pred eccCCHHHHHHHHHHHHHH
Confidence 443 455677777777654
No 343
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.57 E-value=7.4e-13 Score=131.56 Aligned_cols=318 Identities=17% Similarity=0.165 Sum_probs=183.7
Q ss_pred CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhcC--C----CCCCCCCcchHHHHHHHHH----HhCCCCCcEEEeCCHHH
Q 014492 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQL--K----FPYIYPDPESRRLRAALAK----DSGLESDHILVGCGADE 157 (423)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~~--~----~~~~Y~~~g~~~lr~~ia~----~~g~~~~~i~~t~G~~~ 157 (423)
+.+++.+||+..+. ..++ .+|.+.+|+.+. . ....|+.....++-+.+++ ...-..+.+++++++++
T Consensus 54 D~dG~~ylD~~sg~~~~~lGh~~p~i~~Ai~~q~~~~~l~~~~~~~~~~~~~la~~l~~~l~~~~p~~~~~v~f~~SGsE 133 (464)
T TIGR00699 54 DVDGNRLLDLYSQISSIPIGYNNPALLKAAQSPEMATTLINRPALGNFPSKDWAKILKEGILKVAPKGQDQVWTGMSGSD 133 (464)
T ss_pred eCCCCEEEEccCCHhhhcCCCCCHHHHHHHHHHHHHHhhcccccCCcHHHHHHHHHHHHhHHhhCCCCcCEEEEeCCcHH
Confidence 45678899998763 3333 468888888752 1 1122343334456666544 33323368999999999
Q ss_pred HHHHHHHHhcC--------------------------CC---CeEEEcCCCchhhHHHHHH-CCC-----------eEEE
Q 014492 158 LIDLIMRCVLD--------------------------PG---DKIVDCPPTFTMYEFDAAV-NGA-----------AVVK 196 (423)
Q Consensus 158 al~~~~~~l~~--------------------------~g---d~Vl~~~p~y~~~~~~~~~-~g~-----------~~~~ 196 (423)
|++.+++.... +| .+|+....+|++....+.. .|- ....
T Consensus 134 AvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~~ 213 (464)
T TIGR00699 134 ANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQ 213 (464)
T ss_pred HHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCcee
Confidence 99999985421 11 2699999999754443322 121 1112
Q ss_pred ecCCC-C--C-----------CCCHHHHHHHhhc--CCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccC
Q 014492 197 VPRKS-D--F-----------SLNVELIADAVER--EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEA 255 (423)
Q Consensus 197 v~~~~-~--~-----------~~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Dea 255 (423)
+|.+. . + .-+++.+++.+.+ .++.+|++.......|.+.+ .++++++|+. |+++|+||+
T Consensus 214 ~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV 293 (464)
T TIGR00699 214 APFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEV 293 (464)
T ss_pred cCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeee
Confidence 22111 0 0 0135667777743 36788888877777898887 6667777776 999999999
Q ss_pred CccccCCCch--hhhhccC--CcEEEEccChhhhcccCccccccccCHHHHHHHH--HhcCCCCCcHHHHHHHHHHhCC-
Q 014492 256 YTEFSGLESR--MEWVKKH--DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW--RAKQPYNVSVAAEVAACAALQN- 328 (423)
Q Consensus 256 y~~~~~~~~~--~~~~~~~--~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~--~~~~~~~~~~~~~~a~~~~l~~- 328 (423)
+..|...+.. ....+.. +.+ .+++|.+|.. |+++..+. +.... .....|..++++..++.+.|+.
T Consensus 294 ~tGfGrtG~~fa~e~~gv~~~PDi---~t~gK~lg~g----G~~~~~~~-~~~~~~~~~~~T~~gnp~~~aaa~a~L~~l 365 (464)
T TIGR00699 294 QTGVGATGKFWAHEHWNLDDPPDM---VTFSKKFQTA----GYFFHDPA-FRPNKPYRQFNTWMGDPSRALILREIIQEI 365 (464)
T ss_pred eeCCCCCcchhHHHhcCCCCCCCE---EEehhhhccC----Cccccchh-ccCCCCcccccCCCCCHHHHHHHHHHHHHH
Confidence 9877543322 1111111 333 4568988523 44444322 11100 1223466788888777766643
Q ss_pred --hHHHHHHHHHHHHHHHHHHHHHccCC-CCeecC--CCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEE
Q 014492 329 --PIYLEKVKEALIKERERLFKLLKDVP-FLNPYP--SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVR 403 (423)
Q Consensus 329 --~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~p--~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iR 403 (423)
++.++...+.-+..++.|.+..++++ .+.... +.|.++-+++++...+..+.+.+.++||++...+ .+.||
T Consensus 366 ~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~~~~~~~i~~~~~~~Gvl~~~~g----~~~ir 441 (464)
T TIGR00699 366 KRKDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPDEAKRDKLLKKARNNGVNIGGCG----VKAIR 441 (464)
T ss_pred HhcCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEecCCHHHHHHHHHHHHHCCcEEecCC----CCeEE
Confidence 22333333332333333333323355 233223 6678888888643335678888899999997643 47899
Q ss_pred EEec---ChhhHHHHHHHHh
Q 014492 404 VSVG---KPEHTDALMECLM 420 (423)
Q Consensus 404 is~~---~~~~~~~l~~al~ 420 (423)
|... +.++.+.+.++++
T Consensus 442 ~~Ppl~it~~eid~~~~~l~ 461 (464)
T TIGR00699 442 LRPMLVFQKHHADIFLEIIS 461 (464)
T ss_pred EeCCCCCCHHHHHHHHHHHH
Confidence 9976 3444444444444
No 344
>PLN02880 tyrosine decarboxylase
Probab=99.56 E-value=1.8e-12 Score=130.42 Aligned_cols=288 Identities=15% Similarity=0.122 Sum_probs=180.2
Q ss_pred HHHHHHHHHhCCCCC-------cEEEeCCHHHHHHHHHHHhcC-----------CCCeEEEcCCCchhhHHHHHHCCCe-
Q 014492 133 RLRAALAKDSGLESD-------HILVGCGADELIDLIMRCVLD-----------PGDKIVDCPPTFTMYEFDAAVNGAA- 193 (423)
Q Consensus 133 ~lr~~ia~~~g~~~~-------~i~~t~G~~~al~~~~~~l~~-----------~gd~Vl~~~p~y~~~~~~~~~~g~~- 193 (423)
++.+.+++.+|.+.+ .-++|+|+++++..++.+-.+ +.-.|++.+-+|......++..|+.
T Consensus 126 ~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg~ 205 (490)
T PLN02880 126 IVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQIAGIHP 205 (490)
T ss_pred HHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHHHcCCCH
Confidence 455666666787643 367889988887665543211 1124556778899999999999984
Q ss_pred --EEEecCC--CCCCCCHHHHHHHhhcC-----CceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCC-
Q 014492 194 --VVKVPRK--SDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGL- 262 (423)
Q Consensus 194 --~~~v~~~--~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~- 262 (423)
++.||.+ .++.+|+++|++++.+. .|-+|+.+-....||.+-|+++|.++|+. |+|+++|.+|+.+...
T Consensus 206 ~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHVDaA~gg~~~~~ 285 (490)
T PLN02880 206 ENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHVDAAYAGSACIC 285 (490)
T ss_pred HHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEEehhhHHHHHhC
Confidence 7788865 36789999999998631 25667777888999999999999999998 9999999999976421
Q ss_pred Cchhhhhcc-CCcEEEEccChhhhcccCccccccccCH--HHHHHHHHh----cC-------C-----CCC---cHHHHH
Q 014492 263 ESRMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPL--SIIEYLWRA----KQ-------P-----YNV---SVAAEV 320 (423)
Q Consensus 263 ~~~~~~~~~-~~~~i~i~S~SK~~g~~G~R~G~i~~~~--~~~~~l~~~----~~-------~-----~~~---~~~~~~ 320 (423)
+.....+.. ..-.-+..+++|.+ .....+|+++.+. ...+.+... .. . +++ ..+...
T Consensus 286 ~~~~~~l~gie~aDSit~d~HKwl-~~P~~~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~al 364 (490)
T PLN02880 286 PEYRHYIDGVEEADSFNMNAHKWF-LTNFDCSLLWVKDRNALIQSLSTNPEFLKNKASQANSVVDYKDWQIPLGRRFRSL 364 (490)
T ss_pred HHHHHHhcCchhcCEEEECchhhc-CCCccEEEEEEeCHHHHHHHHccCHHHhcCccccccCCCChhccCcCCCCcccHH
Confidence 111112221 23346778899954 5777888888753 222222110 00 0 110 001111
Q ss_pred HHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCC-CCCH-------HHHHHHHHhCCcE
Q 014492 321 AACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS-GMDA-------KKLKDDLAKMGVM 389 (423)
Q Consensus 321 a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~-~~~~-------~~l~~~L~~~gI~ 389 (423)
.+...|+. .+.+.+..++.-++.+++.+.|++.+.+.+ .|...+.+.+++++ ..+. ..+.++|.+.|-.
T Consensus 365 klw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~~~iv~Fr~~~~~~~~~~~~~~n~~l~~~l~~~g~~ 444 (490)
T PLN02880 365 KLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRIFSLVCFRLVPPKNNEDNGNKLNHDLLDAVNSSGKI 444 (490)
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEEeCCCCChhhHHHHHHHHHHHHHhCCCE
Confidence 22222322 244556666666899999999988766654 45566677777752 2221 3466666655444
Q ss_pred EEeCCCCCCCCeEEEEec----ChhhHHHHHHHHhh
Q 014492 390 IRHYNNKELKGYVRVSVG----KPEHTDALMECLMH 421 (423)
Q Consensus 390 v~~~~~~~~~~~iRis~~----~~~~~~~l~~al~~ 421 (423)
........+..++|+++. +.++.+.+.+.|++
T Consensus 445 ~v~~t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~ 480 (490)
T PLN02880 445 FISHTVLSGKYVLRFAVGAPLTEERHVTAAWKVLQD 480 (490)
T ss_pred EEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHH
Confidence 433333344679999975 34555666666554
No 345
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.56 E-value=1.6e-12 Score=128.72 Aligned_cols=284 Identities=19% Similarity=0.162 Sum_probs=191.5
Q ss_pred CCHHHHHHHhc-C----CCCCCCCCcc--hHHHHHHHHHHhCCC-CCcEEEeCCHHHHHHHHHHHhcC-----C---C--
Q 014492 109 PPPEVREALGQ-L----KFPYIYPDPE--SRRLRAALAKDSGLE-SDHILVGCGADELIDLIMRCVLD-----P---G-- 170 (423)
Q Consensus 109 ~~~~v~~al~~-~----~~~~~Y~~~g--~~~lr~~ia~~~g~~-~~~i~~t~G~~~al~~~~~~l~~-----~---g-- 170 (423)
+++...+++.. + .....||... ..++-..+++.++.+ .-.-.+|+|+++++.+.+.+... . +
T Consensus 74 ~~~~a~~~~~~~~~~nl~d~~~~p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~ 153 (460)
T COG0076 74 VPPVAAELLVSALNKNLGDPDESPAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGK 153 (460)
T ss_pred CHHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 34555555543 2 2223455321 234555556667774 34678999999999877664311 0 1
Q ss_pred ----CeEEEcCCCchhhHHHHHHCCCeEEEecCCC-CCCCCHHHHHHHhhcCCce-EEEEcCCCCCcCcCCCHHHHHHHH
Q 014492 171 ----DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPK-CIFLTSPNNPDGSIINDEDLLKIL 244 (423)
Q Consensus 171 ----d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~-~i~l~~p~NPtG~~~~~~~l~~i~ 244 (423)
..|+++.-.|.++...++.+|.....+|.+. ++.+|++++++++.+.... +|+.+-++.+||.+=|+++|.+||
T Consensus 154 ~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~iDdi~~ia~ia 233 (460)
T COG0076 154 PGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPTDYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSIDDIEELADIA 233 (460)
T ss_pred cCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccCccccCHHHHHHHHHhhccCceEEEEecCCCCCccCCHHHHHHHH
Confidence 1688999999999999999999999999765 7899999999999853333 277778999999999999999999
Q ss_pred cC-CCEEEEccCCccccC--CCchhh-hhccCCcEEEEccChhhhcccCccccccccCHH-HHHHHHHhcCCCC------
Q 014492 245 EM-PILVVLDEAYTEFSG--LESRME-WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-IIEYLWRAKQPYN------ 313 (423)
Q Consensus 245 ~~-~~~li~Deay~~~~~--~~~~~~-~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~-~~~~l~~~~~~~~------ 313 (423)
+. ++++++|.||+.|.. ...... ........-+.-+++| ||+.-..+||++..++ ...+......++.
T Consensus 234 ~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK-~g~aP~~~G~il~rd~e~l~~~~~~~~~yl~~~~~~ 312 (460)
T COG0076 234 EEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHK-YGLAPIGCGVVLFRDEEALRRILIFADYYLPGGGIP 312 (460)
T ss_pred HHcCCcEEEEccccceeecccCccchhhcCCCCceEEEECccc-ccCCCCCceEEEEECHHHhhhhhhcccccCCCCCcC
Confidence 98 999999999997652 111112 1222233455678999 6778888999998554 4444443322211
Q ss_pred -------CcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCe-ecCCCceEEEEEeCCCCC-HHHHHHH
Q 014492 314 -------VSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSGMD-AKKLKDD 382 (423)
Q Consensus 314 -------~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~~~~~~~~~~~~-~~~l~~~ 382 (423)
-+.....+.+..+.. .+.+.++.++..++.+++.+.|++.+... +.++..+.+.+++++..+ ..+..++
T Consensus 313 ~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~V~fr~~~~~~~~~~~~~~ 392 (460)
T COG0076 313 NFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEPELPIVAFRLKDDEDTLADLSER 392 (460)
T ss_pred ceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCccceEEEEcCCcccchhchHHH
Confidence 112122233333332 35578888888899999999999987444 455678888899864433 4455566
Q ss_pred HHhCCcEEEeC
Q 014492 383 LAKMGVMIRHY 393 (423)
Q Consensus 383 L~~~gI~v~~~ 393 (423)
+.+.|..+...
T Consensus 393 ~~~~gw~v~~~ 403 (460)
T COG0076 393 LDRRGWQVPAQ 403 (460)
T ss_pred HHhcCceeecc
Confidence 66677777643
No 346
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.55 E-value=6.2e-12 Score=125.81 Aligned_cols=322 Identities=17% Similarity=0.175 Sum_probs=189.4
Q ss_pred CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCCC-----CCCCCcchHHHHHHHHHHhCCCC---CcEEEe-CCHHH
Q 014492 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP-----YIYPDPESRRLRAALAKDSGLES---DHILVG-CGADE 157 (423)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~-----~~Y~~~g~~~lr~~ia~~~g~~~---~~i~~t-~G~~~ 157 (423)
..+++.+||+..+. ..++ .+|+|.+++.+ +... ..++.+...+|-+.+.+...-.- +.++++ +++++
T Consensus 59 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGSE 138 (464)
T PRK06938 59 DVEGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLHTLDLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTGTD 138 (464)
T ss_pred eCCCCEEEEccCCccccccCCCCHHHHHHHHHHHHhhhcccccccCCHHHHHHHHHHHHhCcccccccceEEEeCCCcHH
Confidence 35578899997763 3344 46888888876 2211 12333334456666666553211 356554 78899
Q ss_pred HHHHHHHHhc--CCCCeEEEcCCCchhhHHHHHH-CC------------CeEEEecCCCCCC------------CCHHHH
Q 014492 158 LIDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKSDFS------------LNVELI 210 (423)
Q Consensus 158 al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g------------~~~~~v~~~~~~~------------~d~~~l 210 (423)
+++.+++... ....+|+....+|++....+.. .| ..+..+|.+..+. .+++.+
T Consensus 139 Ave~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l 218 (464)
T PRK06938 139 AVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYL 218 (464)
T ss_pred HHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHH
Confidence 9999988432 1236788888888754433222 11 0223344322111 135677
Q ss_pred HHHhhc-----CCceEEEEcCCCCCcCcCCC-HHHH---HHHHcC-CCEEEEccCCccccCCCchh--hhhccCCcEEEE
Q 014492 211 ADAVER-----EKPKCIFLTSPNNPDGSIIN-DEDL---LKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVL 278 (423)
Q Consensus 211 ~~~i~~-----~~~~~i~l~~p~NPtG~~~~-~~~l---~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~i 278 (423)
++.+.+ .++.+|++...+.-.|.+.+ .+.+ +++|+. |+++|.||++..|...+... ...+..+.+++
T Consensus 219 ~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv~PDiv~- 297 (464)
T PRK06938 219 ENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPDVVV- 297 (464)
T ss_pred HHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCCCCCEEE-
Confidence 777753 25788888766655677654 5444 455555 99999999999885433221 12223344443
Q ss_pred ccChhhhcccCccccccccCHHHHHHHHH--hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHc----c
Q 014492 279 RTFSKRAGLAGLRVGYGAFPLSIIEYLWR--AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLK----D 352 (423)
Q Consensus 279 ~S~SK~~g~~G~R~G~i~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~----~ 352 (423)
++|.+| .|+.+|.+++++++ +.+.. ....|+.++++.+++.+.|+.-+ -++..++.++.-++|.+.|+ +
T Consensus 298 --~gKglg-gG~PlsAv~~~~~~-~~~~~~~~~~T~~gnpla~Aaa~a~L~~l~-~~~l~~~~~~~G~~l~~~L~~l~~~ 372 (464)
T PRK06938 298 --LSKAIG-GSLPLAVVVYREWL-DTWQPGAHAGTFRGNQMAMAAGSATLRYIK-EHRLAEHAAAMGERLREHLRQLQRD 372 (464)
T ss_pred --eecccc-CCCceEEEeehhHh-hccCCCCCCCCCCcCHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 589998 78999999988774 43321 22346788898888888875311 11233344444444444443 3
Q ss_pred CCCCeecCCCceEEEEEeCCC--C---------C---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHH
Q 014492 353 VPFLNPYPSYSNFILCEVTSG--M---------D---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDAL 415 (423)
Q Consensus 353 ~~~~~~~p~~~~~~~~~~~~~--~---------~---~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l 415 (423)
.+.+.-..+.|.++.+++.+. . + ...+.+.+.++||++.+.+. ..+.||+... +.++.+++
T Consensus 373 ~~~i~~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g~--~~~~l~~~Ppl~it~~eid~~ 450 (464)
T PRK06938 373 YPQLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLRRGLILELGGR--HGSVVRFLPPLIITAEQIDEV 450 (464)
T ss_pred CCCeeeeeccceEEEEEeccCcccccccccCCccHHHHHHHHHHHHHCCeEEeecCC--CCCEEEEECCCccCHHHHHHH
Confidence 554443456778888877421 0 1 34567778899999986431 2468999865 44455555
Q ss_pred HHHHh
Q 014492 416 MECLM 420 (423)
Q Consensus 416 ~~al~ 420 (423)
.++++
T Consensus 451 ~~~l~ 455 (464)
T PRK06938 451 AEIFA 455 (464)
T ss_pred HHHHH
Confidence 55444
No 347
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.55 E-value=8.9e-12 Score=127.83 Aligned_cols=281 Identities=11% Similarity=0.108 Sum_probs=175.6
Q ss_pred hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC-CCC----CC
Q 014492 131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDF----SL 205 (423)
Q Consensus 131 ~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~----~~ 205 (423)
..+.++.+|+.||.+ ...+++||++.++..++.+++.+||.|++...+|-+....+.+.|++++.++.. +.+ .+
T Consensus 197 i~eAe~~aA~~fgAd-~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~n~~Gi~g~I 275 (713)
T PRK15399 197 HLEAEEYIARTFGAE-QSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTRNALGILGGI 275 (713)
T ss_pred HHHHHHHHHHHhCCC-cEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeeEEecccccccCCcCCC
Confidence 568889999999964 578899999999999999999999999999999988888888999999999743 222 34
Q ss_pred CH-----HHHHHHhhc----CCceEEEEcCCCCCcCcCCCHHHHHHHHcCCCEE-EEccCCcccc-CCC-----chhhhh
Q 014492 206 NV-----ELIADAVER----EKPKCIFLTSPNNPDGSIINDEDLLKILEMPILV-VLDEAYTEFS-GLE-----SRMEWV 269 (423)
Q Consensus 206 d~-----~~l~~~i~~----~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~l-i~Deay~~~~-~~~-----~~~~~~ 269 (423)
+. +.+++++.+ .+|++++|++|+. .|.+++.+++.+++ |+.+ ++||||..+. +.+ +.+...
T Consensus 276 ~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTY-dGi~yd~~~I~~~~--g~~~ilvDEAhgah~~F~p~~~~~sam~~~ 352 (713)
T PRK15399 276 PRREFTRDSIEEKVAATTQAQWPVHAVITNSTY-DGLLYNTDWIKQTL--DVPSIHFDSAWVPYTHFHPIYQGKSGMSGE 352 (713)
T ss_pred ChhhccHHHHHHHHHhCCCcCCceEEEEECCCC-CceeeCHHHHHHHh--CCCEEEEeccchhhhhcCcccCCcChhhCC
Confidence 55 888888864 2347899999955 89999999999888 5655 6999997643 222 111111
Q ss_pred -ccCCcEEEEccChhhhcccCcccc-ccccCH----HHHHHHHHhcCCCCCcHHHH---HHHHHHhCChHHHHHHHHHHH
Q 014492 270 -KKHDNLIVLRTFSKRAGLAGLRVG-YGAFPL----SIIEYLWRAKQPYNVSVAAE---VAACAALQNPIYLEKVKEALI 340 (423)
Q Consensus 270 -~~~~~~i~i~S~SK~~g~~G~R~G-~i~~~~----~~~~~l~~~~~~~~~~~~~~---~a~~~~l~~~~~~~~~~~~~~ 340 (423)
.....++++.|.+|.+ +|+.-+ ++.... +.++......++.+++.+.. ..+.+.++.. .-++..+...
T Consensus 353 ~~aD~~i~~tQStHKtL--~alTQaS~iHvk~~vd~~~~n~a~~m~~STSPsY~LmASLD~a~~~m~~~-~G~~l~~~~i 429 (713)
T PRK15399 353 RVPGKVIFETQSTHKML--AAFSQASLIHIKGEYDEETFNEAFMMHTSTSPSYPIVASVETAAAMLRGN-PGKRLINRSV 429 (713)
T ss_pred CCCCeeeeeeeehhccc--cccchheeeeecCCCCHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhh-hhHHHHHHHH
Confidence 1122345699999975 566544 444422 22223333334444544432 2333333321 1122233333
Q ss_pred HHHHHHHHHHccCC-----C-CeecC--------------CCc---------eE-------EEEEeC----------CCC
Q 014492 341 KERERLFKLLKDVP-----F-LNPYP--------------SYS---------NF-------ILCEVT----------SGM 374 (423)
Q Consensus 341 ~~~~~l~~~L~~~~-----~-~~~~p--------------~~~---------~~-------~~~~~~----------~~~ 374 (423)
+....+++.|.++. | +.+.. +.. .+ +++..| .|.
T Consensus 430 ~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~lDP~KltI~t~g~~~~g~~~~~Gi 509 (713)
T PRK15399 430 ERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADADHMFLDPVKVTILTPGMDEQGNMSEEGI 509 (713)
T ss_pred HHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCcccccccccccccccCCCceEEEEecCcccccccccCCC
Confidence 33333444443322 1 22221 100 01 334443 167
Q ss_pred CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEe--c-ChhhHHHHHHHHhhh
Q 014492 375 DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSV--G-KPEHTDALMECLMHL 422 (423)
Q Consensus 375 ~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~--~-~~~~~~~l~~al~~l 422 (423)
++..+.++|.++||.+...+. ..+=+-+ + +..+.+.|.++|.++
T Consensus 510 ~g~~l~~~L~e~gI~~E~~d~----~~vL~l~s~g~t~~~~~~L~~aL~~f 556 (713)
T PRK15399 510 PAALVAKFLDERGIVVEKTGP----YNLLFLFSIGIDKTKAMGLLRGLTEF 556 (713)
T ss_pred CHHHHHHHHHHcCCEEEecCC----CeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 788999999999999987662 3333333 3 455566777777654
No 348
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.55 E-value=2.3e-12 Score=123.12 Aligned_cols=321 Identities=21% Similarity=0.146 Sum_probs=196.9
Q ss_pred CCCCCCeeEcCCCCCCC--C-CCHHHHHHHhc-CCCCCCCCCcc--hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHH
Q 014492 91 GRKPEDIVKIDANENPY--G-PPPEVREALGQ-LKFPYIYPDPE--SRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (423)
Q Consensus 91 ~~~~~~~i~l~~~~~~~--~-~~~~v~~al~~-~~~~~~Y~~~g--~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~ 164 (423)
+.+++.+||+..+..+. + .+|.|.+|+.+ +..+..|+.|. .-++-+.+.+.++ ..+.|-++|++|||...+++
T Consensus 49 DvDGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~G~~fg~Pte~Ei~~Aell~~~~p-~~e~vrfvnSGTEAtmsAiR 127 (432)
T COG0001 49 DVDGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLERGLSFGAPTELEVELAELLIERVP-SIEKVRFVNSGTEATMSAIR 127 (432)
T ss_pred eCCCCEeeehhccCcccccCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcC-cccEEEEecchhHHHHHHHH
Confidence 34577888887665543 3 46889999987 45556664443 3456677777776 34789999999999988887
Q ss_pred Hh--cCCCCeEEEcCCCchhhHHHHHH-CC--CeEEE------ecCCC-C-----CCCCHHHHHHHhhcC--CceEEEEc
Q 014492 165 CV--LDPGDKIVDCPPTFTMYEFDAAV-NG--AAVVK------VPRKS-D-----FSLNVELIADAVERE--KPKCIFLT 225 (423)
Q Consensus 165 ~l--~~~gd~Vl~~~p~y~~~~~~~~~-~g--~~~~~------v~~~~-~-----~~~d~~~l~~~i~~~--~~~~i~l~ 225 (423)
.- ....|+|+..+-+|+.....+.. .| ..-.. +|.+. . ---|++.+++++++. ++.+|++.
T Consensus 128 lARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yND~~al~~~~~~~g~~IAaVIvE 207 (432)
T COG0001 128 LARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYNDLEALEEAFEEYGDDIAAVIVE 207 (432)
T ss_pred HHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCCCHHHHHHHHHHcCCcEEEEEec
Confidence 32 12248999999999865554433 22 11111 11100 0 023799999999754 78888888
Q ss_pred -CCCCCcCcCCCHHH----HHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCH
Q 014492 226 -SPNNPDGSIINDED----LLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299 (423)
Q Consensus 226 -~p~NPtG~~~~~~~----l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~ 299 (423)
-+.| .|.+.|.++ |++|++. |+++|.||+...|........ .-++-.--+.++.|.+| .|+.+|.+-++.
T Consensus 208 Pv~gn-~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq--~~~gi~PDlttlGKiIG-GGlP~ga~gGr~ 283 (432)
T COG0001 208 PVAGN-MGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQ--GYYGVEPDLTTLGKIIG-GGLPIGAFGGRA 283 (432)
T ss_pred cccCC-CCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcccc--cccCcCcchhhhhhhhc-CCcceeeeccHH
Confidence 4455 688777654 4556665 999999999987764311111 11111123456889998 999999999999
Q ss_pred HHHHHHHHhcC-----CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc----CCC-CeecCCCceEEEEE
Q 014492 300 SIIEYLWRAKQ-----PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKD----VPF-LNPYPSYSNFILCE 369 (423)
Q Consensus 300 ~~~~~l~~~~~-----~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~-~~~~p~~~~~~~~~ 369 (423)
++++.+..... .++-|+++..|..+.|+.-...+...+++.+..++|.+.|++ .+. ..+...+++|-+.-
T Consensus 284 eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~~~gsm~~i~F 363 (432)
T COG0001 284 EIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAERHGIPLTVNRVGSMFGIFF 363 (432)
T ss_pred HHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeecceEEEEe
Confidence 99997765543 256788888888887754221112455555666666665543 332 12333444443221
Q ss_pred eCC-CC-----------CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHh
Q 014492 370 VTS-GM-----------DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLM 420 (423)
Q Consensus 370 ~~~-~~-----------~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~ 420 (423)
.+. .. ....+...|+++||++.|... ...=+|.. +++++++..++++
T Consensus 364 ~~~~~~n~~da~~sd~~~~~~~~~~~l~~GV~l~ps~~----ea~flS~ahte~di~~~~~a~~ 423 (432)
T COG0001 364 TEEGVRNYADAKRSDVERFAKFFHHLLNRGVYLAPSQF----EAGFLSTAHTEEDIDRTLEAAD 423 (432)
T ss_pred cCCCCCCHHHHHhhchHHHHHHHHHHHhCCcccCCccc----cceeeecccCHHHHHHHHHHHH
Confidence 111 11 134456677899999998752 11123433 4555555555544
No 349
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.55 E-value=2.3e-12 Score=134.69 Aligned_cols=286 Identities=13% Similarity=0.101 Sum_probs=179.7
Q ss_pred HHHHHHHHHHhCCCCCcEEEeCCHHHHHHH--HHHH-hcCC----CCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCC
Q 014492 132 RRLRAALAKDSGLESDHILVGCGADELIDL--IMRC-VLDP----GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFS 204 (423)
Q Consensus 132 ~~lr~~ia~~~g~~~~~i~~t~G~~~al~~--~~~~-l~~~----gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~ 204 (423)
.++++.+++..|.+.-.+...+|++.-+.. +++. .+.+ .++|+++.-.|......+...|.+++.+|.++++.
T Consensus 546 ~elq~~l~eLtGmd~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpasa~~~GieVv~Vp~D~~G~ 625 (954)
T PRK12566 546 DELEAWLCAITGFDAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPASAQMAGMRVVIVECDPDGN 625 (954)
T ss_pred HHHHHHHHHHHCCCeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHHHHHCCCEEEEeccCCCCC
Confidence 478888899999765554444555433222 2222 1222 25778888888655556778999999999877779
Q ss_pred CCHHHHHHHhhc--CCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccC
Q 014492 205 LNVELIADAVER--EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF 281 (423)
Q Consensus 205 ~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~ 281 (423)
+|+++|++.+++ .++.+|++++|++-.+...+.+++.++++. |+++++|.++..... ........+-+++.+++
T Consensus 626 iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~---~l~~Pg~~GADi~~~s~ 702 (954)
T PRK12566 626 VDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQV---GLARPADIGADVSHMNL 702 (954)
T ss_pred cCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhcc---CCCChhhcCCCEEEecC
Confidence 999999999963 567788888998866666668888888886 999999999862211 11112245567999999
Q ss_pred hhhhccc----CccccccccCHHHHHHHHHhc---------CCCC------CcHHHHHHHHHHhCC--hHHHHHHHHHHH
Q 014492 282 SKRAGLA----GLRVGYGAFPLSIIEYLWRAK---------QPYN------VSVAAEVAACAALQN--PIYLEKVKEALI 340 (423)
Q Consensus 282 SK~~g~~----G~R~G~i~~~~~~~~~l~~~~---------~~~~------~~~~~~~a~~~~l~~--~~~~~~~~~~~~ 340 (423)
+|.|+.| |.-+|.+...+.+...+.... .... .+.....++...+.. .+ +.+......
T Consensus 703 HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa~~l~~A~~Yi~~lG~e-Lk~aa~~ai 781 (954)
T PRK12566 703 HKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVEGPDPNNGAVSAAPWGSASILPISWMYIAMMGPQ-LADASEVAI 781 (954)
T ss_pred CcccCcCccCCCCccchhhhhhhhhhhccCCCCcCCCCCCCCCCceeecccchHHHHHHHHHHHHHHCHH-HHHHHHHHH
Confidence 9988633 344555555554443333211 0011 111223333334333 23 555555556
Q ss_pred HHHHHHHHHHccCCCCeecCCCceE---EEEE---eC--CCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---Ch
Q 014492 341 KERERLFKLLKDVPFLNPYPSYSNF---ILCE---VT--SGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KP 409 (423)
Q Consensus 341 ~~~~~l~~~L~~~~~~~~~p~~~~~---~~~~---~~--~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~ 409 (423)
.+.+++.+.|.+.-.+...+..+.| ..++ ++ .+.+..++.++|.++||..... .+...+++||+.+ +.
T Consensus 782 lnAnYla~rL~~~~~v~~~~~~~~~~hEfii~~~~l~~~~g~~~~dvakRL~d~Gihapt~-~fPv~~~LmIepTE~esk 860 (954)
T PRK12566 782 LSANYLANQLGGAFPVLYRGRNERVAHECILDLRPLKAQTGISEEDVAKRLMDYGFHAPTM-SFPVPGTLMVEPTESESK 860 (954)
T ss_pred HHHHHHHHHhHhhCCCCcCCCCCCeeeEEEEEccccccccCCCHHHHHHHHHHCCcEEeEE-eeccCCEEEEEeeeeCCH
Confidence 7888999999763222222222221 1122 33 2467888999999999876543 3334789999976 56
Q ss_pred hhHHHHHHHHhhh
Q 014492 410 EHTDALMECLMHL 422 (423)
Q Consensus 410 ~~~~~l~~al~~l 422 (423)
++.|+|.++++.+
T Consensus 861 eEIDrf~eAL~~I 873 (954)
T PRK12566 861 AELDRFVEAMLSI 873 (954)
T ss_pred HHHHHHHHHHHHH
Confidence 6778888877654
No 350
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.55 E-value=7.1e-12 Score=128.59 Aligned_cols=281 Identities=11% Similarity=0.128 Sum_probs=178.9
Q ss_pred hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC-CCC----CC
Q 014492 131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDF----SL 205 (423)
Q Consensus 131 ~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~----~~ 205 (423)
..+.++.+|+.||.+ ...+++||++.++..++.+++.+||.|++...+|-+....+.+.|++++.++.. +.+ .+
T Consensus 197 i~eAe~~AA~~fgAd-~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~rn~~Gi~g~I 275 (714)
T PRK15400 197 HKEAEEYIARVFNAD-RSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGI 275 (714)
T ss_pred HHHHHHHHHHHhCCC-cEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccCCccCC
Confidence 568899999999964 578899999999999999999999999999999988888888999999999743 222 33
Q ss_pred C-----HHHHHHHhhcC-C---ceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCcccc-CCC-----chhhhh
Q 014492 206 N-----VELIADAVERE-K---PKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLE-----SRMEWV 269 (423)
Q Consensus 206 d-----~~~l~~~i~~~-~---~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~-~~~-----~~~~~~ 269 (423)
+ .+.+++++.+. + ++.++|++|+. .|.+++.+++.++++. + |++||||..+. +.+ +.+...
T Consensus 276 ~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTY-dG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p~~~~~sam~~g 352 (714)
T PRK15400 276 PQSEFQHATIAKRVKETPNATWPVHAVITNSTY-DGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEGKCGMSGG 352 (714)
T ss_pred CccccCHHHHHHHHHhCccccCccEEEEECCCC-ccEecCHHHHHHHhCCCC--EEEEccchhhhccCcccCCcChhhcC
Confidence 4 89999988642 2 33788899955 8999999999999986 5 78999998653 222 122111
Q ss_pred c-cCCcEEEEccChhhhcccCcccc-cccc----CHHHHHHHHHhcCCCCCcHHHH---HHHHHHhCChHHHHHHHHHHH
Q 014492 270 K-KHDNLIVLRTFSKRAGLAGLRVG-YGAF----PLSIIEYLWRAKQPYNVSVAAE---VAACAALQNPIYLEKVKEALI 340 (423)
Q Consensus 270 ~-~~~~~i~i~S~SK~~g~~G~R~G-~i~~----~~~~~~~l~~~~~~~~~~~~~~---~a~~~~l~~~~~~~~~~~~~~ 340 (423)
. ..+.++++.|.+|.+ +|+.-+ ++.. +.+.++......++.+++.+.. ..+.+.++.. .-++..+...
T Consensus 353 a~~~~~i~vtQStHKtL--~alTQaS~LHvkg~vd~~~~n~a~~m~~STSPsY~l~ASLD~a~~~m~~~-~G~~l~~~~i 429 (714)
T PRK15400 353 RVEGKVIYETQSTHKLL--AAFSQASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGN-AGKRLINGSI 429 (714)
T ss_pred CCCCCceEEEEchhhcc--cchhHHhHHHHcCCCCHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhh-hhHHHHHHHH
Confidence 1 124569999999975 565543 4433 2222333333334444444432 3333333321 1223333333
Q ss_pred HHHHHHHHHHccCCC------CeecCCC-----------------c--------eE-----EEEEeCC----------CC
Q 014492 341 KERERLFKLLKDVPF------LNPYPSY-----------------S--------NF-----ILCEVTS----------GM 374 (423)
Q Consensus 341 ~~~~~l~~~L~~~~~------~~~~p~~-----------------~--------~~-----~~~~~~~----------~~ 374 (423)
+....+++.|.+++. +.+.... | .+ +.+..|+ |.
T Consensus 430 ~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~Klti~tpgi~~~g~~~~~Gi 509 (714)
T PRK15400 430 ERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMKKDGTMSDFGI 509 (714)
T ss_pred HHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCcccccccccccCCceEEEEeCCCCCCccccccCC
Confidence 444444444444332 2222100 0 01 3344432 45
Q ss_pred CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEe--c-ChhhHHHHHHHHhhh
Q 014492 375 DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSV--G-KPEHTDALMECLMHL 422 (423)
Q Consensus 375 ~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~--~-~~~~~~~l~~al~~l 422 (423)
.+..+.++|.++||.+...+ ...+=+-+ + +..+.+.|.++|.++
T Consensus 510 pg~~v~~~L~e~gI~~E~~d----~~~iLfl~s~g~t~~~~~~L~~aL~~f 556 (714)
T PRK15400 510 PASIVAKYLDEHGIVVEKTG----PYNLLFLFSIGIDKTKALSLLRALTDF 556 (714)
T ss_pred CHHHHHHHHHHcCCEEEecC----CCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 68889999999999998765 23344433 3 455566677777654
No 351
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.52 E-value=8.8e-12 Score=124.67 Aligned_cols=323 Identities=14% Similarity=0.159 Sum_probs=186.2
Q ss_pred CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCCC---C--CCCCcchHHHHHHHHHHhCCC-C--CcEEEeCCHHHH
Q 014492 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP---Y--IYPDPESRRLRAALAKDSGLE-S--DHILVGCGADEL 158 (423)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~---~--~Y~~~g~~~lr~~ia~~~g~~-~--~~i~~t~G~~~a 158 (423)
..+++.+||+..+. ..++ .+|++.+++.+ +... + .++.+...++-+.+++..+-. . ..++++++++++
T Consensus 54 D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEA 133 (459)
T PRK06931 54 DVEGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPLHTLDLTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADA 133 (459)
T ss_pred eCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhhccccccccCCHHHHHHHHHHHHhCCCccccceEEEeCCCcHHH
Confidence 45678899998774 3333 46889888876 2211 1 123333456777777766422 1 234666899999
Q ss_pred HHHHHHHhc--CCCCeEEEcCCCchhhHHHHHH-CC------------CeEEEecCCCCCC--------CCHHHH----H
Q 014492 159 IDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKSDFS--------LNVELI----A 211 (423)
Q Consensus 159 l~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g------------~~~~~v~~~~~~~--------~d~~~l----~ 211 (423)
++.+++... ....+|+....+|++....+.. .| ..+..+|.++.+. -+.+.+ +
T Consensus 134 ve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (459)
T PRK06931 134 VEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFE 213 (459)
T ss_pred HHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHH
Confidence 999988432 2236788888888765544432 11 1123333222111 122333 3
Q ss_pred HHhhc-----CCceEEEEcCCCCCcCcCCC-HHH---HHHHHcC-CCEEEEccCCccccCCCchh--hhhccCCcEEEEc
Q 014492 212 DAVER-----EKPKCIFLTSPNNPDGSIIN-DED---LLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLR 279 (423)
Q Consensus 212 ~~i~~-----~~~~~i~l~~p~NPtG~~~~-~~~---l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~i~ 279 (423)
+.+.+ .++.+|++...+.-.|.+.+ .+. ++++|+. |+++|.||++..|...+... ...+..+.++
T Consensus 214 ~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv~PDiv--- 290 (459)
T PRK06931 214 NFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGIEPDII--- 290 (459)
T ss_pred HHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCCCCCEE---
Confidence 33321 34788888766665677654 443 4555665 99999999999885433221 1222233333
Q ss_pred cChhhhcccCccccccccCHHHHHHHHH--hcCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCC
Q 014492 280 TFSKRAGLAGLRVGYGAFPLSIIEYLWR--AKQPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVP 354 (423)
Q Consensus 280 S~SK~~g~~G~R~G~i~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~ 354 (423)
+++|.++ .|+.+|.++..+++ +.+.. ....|+.++++..++.+.|+. ++.++...+.-...++.|.+..++.+
T Consensus 291 t~gK~l~-gG~Pi~av~~~~~~-~~~~~~~~~~T~~gnpla~aaala~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~ 368 (459)
T PRK06931 291 VMSKAVG-GGLPLAVLGIKKEF-DAWQPGGHTGTFRGNQLAMATGLTTLKILKEENLAQNAAERGEWLKAQLAELQKRYP 368 (459)
T ss_pred Eeccccc-CCcceeeeeeHHHH-hhccCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 3589998 78999988777653 44421 223467889988888887753 23333333333333444443334455
Q ss_pred CCeecCCCceEEEEEeCCCC-----------C---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHH
Q 014492 355 FLNPYPSYSNFILCEVTSGM-----------D---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALME 417 (423)
Q Consensus 355 ~~~~~p~~~~~~~~~~~~~~-----------~---~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~ 417 (423)
.+.-....|.++.+++.+.. + ...+...+.++||++.+.+. ..+.+|+.++ +.++.+++.+
T Consensus 369 ~i~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~--~~~~l~~~Ppl~it~~eid~~~~ 446 (459)
T PRK06931 369 CIGNVRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACFENGLLLERGGR--NGNVVRLLPPLLITQAECEEFID 446 (459)
T ss_pred CeEeEecCceEEEEEEccCcccccccccCCccHHHHHHHHHHHHHCCcEEeecCC--CCCEEEEECCCCcCHHHHHHHHH
Confidence 44444567788777773210 1 24566777899999976532 2478999876 3444444444
Q ss_pred HHh
Q 014492 418 CLM 420 (423)
Q Consensus 418 al~ 420 (423)
+++
T Consensus 447 ~l~ 449 (459)
T PRK06931 447 RFE 449 (459)
T ss_pred HHH
Confidence 443
No 352
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.51 E-value=3e-11 Score=119.33 Aligned_cols=285 Identities=17% Similarity=0.163 Sum_probs=190.9
Q ss_pred chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--C----CC
Q 014492 130 ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--S----DF 203 (423)
Q Consensus 130 g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~----~~ 203 (423)
-..+.++..|+.+|.+ ...+++||++.++..++.+++.+||.|+++..+|-+.....-+.|+.++.+... + -.
T Consensus 71 ~i~eAqe~aA~~fgAd-~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np~~gi~g 149 (557)
T COG1982 71 PIKEAQELAARVFGAD-HTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNPLYGIIG 149 (557)
T ss_pred cHHHHHHHHHHHhCCC-ceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHHHcCCceEEecCCCCccccccC
Confidence 3568899999999964 477899999999999999999999999999999988888888899999988732 2 24
Q ss_pred CCCHHHHHHHhhc-CCc-eEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCc-hhhhhccCCcEEEEc
Q 014492 204 SLNVELIADAVER-EKP-KCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLES-RMEWVKKHDNLIVLR 279 (423)
Q Consensus 204 ~~d~~~l~~~i~~-~~~-~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~-~~~~~~~~~~~i~i~ 279 (423)
+++.+.+++++.+ ... |+++++||+. .|++++.+++.+.+.. ++|+.+|+++........ ........+.+++..
T Consensus 150 gI~~~~~~~~l~~~~~~~k~~vitnpTY-dGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~~~~~~~tq 228 (557)
T COG1982 150 GIPLETFKEALLAHPDAEKLAVITNPTY-DGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALNGGADFVTQ 228 (557)
T ss_pred CCCHHHHHHHHHhChhhheeEEEecCcc-ceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchhhhcCceEEEe
Confidence 6899999987753 344 7889899887 8999999999999887 999999999875442211 122222367789999
Q ss_pred cChhhhcccCcccc-ccccCH------HHHHHHHHhcCCCCCcHHHHHH---HHHHhCC--hHHHHHHHHHHHHHHHHHH
Q 014492 280 TFSKRAGLAGLRVG-YGAFPL------SIIEYLWRAKQPYNVSVAAEVA---ACAALQN--PIYLEKVKEALIKERERLF 347 (423)
Q Consensus 280 S~SK~~g~~G~R~G-~i~~~~------~~~~~l~~~~~~~~~~~~~~~a---~~~~l~~--~~~~~~~~~~~~~~~~~l~ 347 (423)
|.+|.+ +++.-+ ++..+. +-+.......+..+++.+..+. +...... ...+++.....-+.|+.+.
T Consensus 229 S~HK~l--~alSQaS~iHv~~~~~~~~~r~nea~~~h~STSPsY~l~ASlD~Ar~~~~~~G~~l~~~~~~~~i~~r~~~~ 306 (557)
T COG1982 229 STHKLL--AALSQASMIHVKDGRAVNHERFNEALMMHQSTSPSYPLMASLDVARMQEGNAGRELWQEVIDEAIDFRKALR 306 (557)
T ss_pred chhhhh--hhhhhhHHHhhCCCccCCHHHHHHHHHHHccCCchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 999976 455544 555542 2222222223333343332222 2222211 1234445566666777777
Q ss_pred HHHccCCCCeecCCC------c----------eE------EEEEeC-CCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEE
Q 014492 348 KLLKDVPFLNPYPSY------S----------NF------ILCEVT-SGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRV 404 (423)
Q Consensus 348 ~~L~~~~~~~~~p~~------~----------~~------~~~~~~-~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRi 404 (423)
+..++++|+.++... + .+ +.+..| .|..+..+..+|+++||...-.+. ....+=+
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp~~Gipg~~v~~~L~e~gii~e~~~d--~~~lll~ 384 (557)
T COG1982 307 RLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTPEFGIPGAIVAKYLREHGIIPEETGD--YSNLLLF 384 (557)
T ss_pred HHHHhcCCeeeccccccCCcccccccccccccceeccccEEEEecCCCCCcHHHHHHHHHHcCCeeeecCC--ceeeEEe
Confidence 777777766543211 1 11 334443 388999999999999998876552 1122333
Q ss_pred Eec---ChhhHHHHHHHHh
Q 014492 405 SVG---KPEHTDALMECLM 420 (423)
Q Consensus 405 s~~---~~~~~~~l~~al~ 420 (423)
+.+ .....+.|.++.+
T Consensus 385 ~~~~gk~~~lv~~L~~f~r 403 (557)
T COG1982 385 SPGIGKWQTLVDRLLEFKR 403 (557)
T ss_pred eeccchHHHHHHHHHHHHH
Confidence 333 3445566666665
No 353
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.50 E-value=1.8e-11 Score=130.88 Aligned_cols=265 Identities=15% Similarity=0.090 Sum_probs=179.2
Q ss_pred HHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh-cCC--CCeEEEcCCCchhhHHH----HHHCCCeEEEecCCCCCC
Q 014492 132 RRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDP--GDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRKSDFS 204 (423)
Q Consensus 132 ~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l-~~~--gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~~~~~ 204 (423)
.++++.++++.|.+..++.+..+++++.+.++.++ ..+ +++|++++..|+..... ++..|++++.++.+.+
T Consensus 124 ~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~d-- 201 (954)
T PRK05367 124 LNFQTMVADLTGLEIANASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAKA-- 201 (954)
T ss_pred HHHHHHHHHHHCCChhhccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCccC--
Confidence 37889999999999999999999999999888766 344 38999999999865543 4568999999996432
Q ss_pred CCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChh
Q 014492 205 LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSK 283 (423)
Q Consensus 205 ~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK 283 (423)
++ ..++.++++.+|+ -+|.+.+.+++.++++. |+++++|....-+.... .....+-++++++..|
T Consensus 202 ~~---------~~~~~~vlvq~p~-~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~l~----~pge~GaDi~vgs~qk 267 (954)
T PRK05367 202 LD---------HDDVFGVLLQYPG-TSGEVRDYTALIAAAHARGALVAVAADLLALTLLT----PPGEMGADIAVGSAQR 267 (954)
T ss_pred CC---------cccEEEEEEecCC-CCeeeccHHHHHHHHHHcCCEEEEEehhhhccCCC----ChhhcCCCEEEeeCcc
Confidence 11 2356566666775 59999999999999987 99999987553222211 1234556689999998
Q ss_pred h-----hcccCccccccccCHHHHHHHHHh-c---------C----------------CCCCcHHH---HHHHHH----H
Q 014492 284 R-----AGLAGLRVGYGAFPLSIIEYLWRA-K---------Q----------------PYNVSVAA---EVAACA----A 325 (423)
Q Consensus 284 ~-----~g~~G~R~G~i~~~~~~~~~l~~~-~---------~----------------~~~~~~~~---~~a~~~----~ 325 (423)
. ||-|| .|++.+.+++.+.+.-. . . ..+.|... ..++.+ .
T Consensus 268 fg~P~g~GGP~--aGflavr~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~ 345 (954)
T PRK05367 268 FGVPMGFGGPH--AAYFAVRDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAV 345 (954)
T ss_pred cCCCCCCCCCC--EEEEEECHHHHhhCCCCeeeeecccCCCcccccccccccccccccccccccchHHHHHHHHHHHHHH
Confidence 5 44344 89999888877655310 0 0 01111111 111111 1
Q ss_pred hCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEE
Q 014492 326 LQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVS 405 (423)
Q Consensus 326 l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis 405 (423)
+..+..+++..++...+..++.+.|++.++....+.....+.++++ .++.++.++|.++||.++... ++.+|||
T Consensus 346 ~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G~~~~~~~~f~~~~~~~~--~~~~~i~~~l~~~gi~~~~~~----~~~l~is 419 (954)
T PRK05367 346 YHGPEGLKAIARRVHRLAAILAAGLRALGLEVVHDSFFDTLTVEVG--GDAAAVLARALAAGINLRRVD----DDHVGIS 419 (954)
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHhcCcccCCCCCCCeEEEeCC--CCHHHHHHHHHHCCceecccc----CCEEEEE
Confidence 1234568888899999999999999875432222222223445553 478999999999999995543 4689999
Q ss_pred ec---ChhhHHHHHHHHh
Q 014492 406 VG---KPEHTDALMECLM 420 (423)
Q Consensus 406 ~~---~~~~~~~l~~al~ 420 (423)
+. +.++++.|.+++.
T Consensus 420 ~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 420 LDETTTREDLAALLAVFG 437 (954)
T ss_pred ecccCCHHHHHHHHHHHc
Confidence 86 4555666666553
No 354
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.49 E-value=1.5e-11 Score=117.94 Aligned_cols=304 Identities=13% Similarity=0.039 Sum_probs=199.0
Q ss_pred eEcCCCCCCCCCCHHHHHHHhc-C-C----------CCCCCCCcc--hHHHHHHHHHHhCCCC-CcE-EEeCCHHHHHHH
Q 014492 98 VKIDANENPYGPPPEVREALGQ-L-K----------FPYIYPDPE--SRRLRAALAKDSGLES-DHI-LVGCGADELIDL 161 (423)
Q Consensus 98 i~l~~~~~~~~~~~~v~~al~~-~-~----------~~~~Y~~~g--~~~lr~~ia~~~g~~~-~~i-~~t~G~~~al~~ 161 (423)
+.|+.|. ...|++|++++++ + + ..|+-+... ..++++.+.+.++++. .+| ++..|++.++++
T Consensus 6 ~nF~aGP--a~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea 83 (364)
T PRK12462 6 LNFSGGP--GALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSM 83 (364)
T ss_pred ceecCCC--cCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHH
Confidence 4555443 3346788877764 1 1 123333332 4578888888999843 245 556669999999
Q ss_pred HHHHhcCCCCeEE--EcCCCch-hhHHHHHHCCCeEEEecC----CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcC
Q 014492 162 IMRCVLDPGDKIV--DCPPTFT-MYEFDAAVNGAAVVKVPR----KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI 234 (423)
Q Consensus 162 ~~~~l~~~gd~Vl--~~~p~y~-~~~~~~~~~g~~~~~v~~----~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~ 234 (423)
+...++.+||+++ +..-.|. .+...++.+| ++..+.. +.+..++++.+ .+. .+.+.|.+|+-...||+.
T Consensus 84 ~~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~--~~~-~d~~~v~~t~NETstGv~ 159 (364)
T PRK12462 84 IPMNFSRPGAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAEL--DWD-ARAPFRHYVSNETVEGLQ 159 (364)
T ss_pred HHHHcCCCCCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHh--ccC-CCCcEEEEccCCCCceEe
Confidence 9999999999654 5555554 4445566666 4444431 12234556665 222 467889999999999999
Q ss_pred CCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHh-----
Q 014492 235 INDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA----- 308 (423)
Q Consensus 235 ~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~----- 308 (423)
++ ++.+. +.++|+|.+=..+.. +-. ++++ .++..+.-|.+|.|| ++.++.+++.+++..+.
T Consensus 160 ~~-----~~~~~~~~llvvD~sS~~~s~-pid---~~~~--dvi~agsQKnlgP~G--ltvvivs~~al~~~~~~~p~~l 226 (364)
T PRK12462 160 FP-----DAAGLPDSPLIADMSSDFMSR-PFD---VEAY--GMVYAHAQKNLGPAG--VTVAIIRRALLERVPDTLPPML 226 (364)
T ss_pred cC-----cccccCCCeEEEEcCchhhCC-CCC---hHHc--cEEEeeccccCCCCc--eEEEEECHHHHhhccccCCchh
Confidence 87 33333 889999988664332 111 2223 477777899999888 57788888887654321
Q ss_pred ---------cCCCCCcHHHHHHHHHHhCC--hH--HHHHHHHHHHHHHHHHHHHHccCCCCeec---C--CCceEEEEEe
Q 014492 309 ---------KQPYNVSVAAEVAACAALQN--PI--YLEKVKEALIKERERLFKLLKDVPFLNPY---P--SYSNFILCEV 370 (423)
Q Consensus 309 ---------~~~~~~~~~~~~a~~~~l~~--~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~---p--~~~~~~~~~~ 370 (423)
..+++++....+++..+|+. .+ .++.+.++.++..+.+++.+++.++.... + ..-+-+.+++
T Consensus 227 dy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~~~~~RS~mnv~f~~ 306 (364)
T PRK12462 227 DFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAHRAARSTMNVAFRF 306 (364)
T ss_pred hHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcCcceEEEEc
Confidence 11235667777777666553 23 67888999999999999999998744321 2 2234566777
Q ss_pred CCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEe---cChhhHHHHHHHHhhh
Q 014492 371 TSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSV---GKPEHTDALMECLMHL 422 (423)
Q Consensus 371 ~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~---~~~~~~~~l~~al~~l 422 (423)
++....++|.+.+.++|+.-..|.. .-|.+|+|+ ...+..+.|.+.++.+
T Consensus 307 ~~~~l~~~f~~~a~~~gl~~lkGhr--~vgg~Ras~yna~~~e~v~~L~~fm~~f 359 (364)
T PRK12462 307 RQPRLDTLFKEQSTEAGFCGLSGHR--SIGGIRASLYNAVSEQAVSRLCAFLKDF 359 (364)
T ss_pred CCHHHHHHHHHHHHHCCCccccCCc--ccCceEEEcCCCCCHHHHHHHHHHHHHH
Confidence 6555567788888899988766542 245699996 2566778888888765
No 355
>PLN02590 probable tyrosine decarboxylase
Probab=99.49 E-value=1.1e-11 Score=124.79 Aligned_cols=288 Identities=14% Similarity=0.092 Sum_probs=180.0
Q ss_pred HHHHHHHHHhCCCC-------CcEEEeCCHHHHHHHHHHHhcC-----------CCCeEEEcCCCchhhHHHHHHCCC--
Q 014492 133 RLRAALAKDSGLES-------DHILVGCGADELIDLIMRCVLD-----------PGDKIVDCPPTFTMYEFDAAVNGA-- 192 (423)
Q Consensus 133 ~lr~~ia~~~g~~~-------~~i~~t~G~~~al~~~~~~l~~-----------~gd~Vl~~~p~y~~~~~~~~~~g~-- 192 (423)
++.+.+++.+|++. ..-++++|+++++..++.+-.+ +.-.|++.+.+|......++..|+
T Consensus 174 ~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~ 253 (539)
T PLN02590 174 IVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACLIGGIHE 253 (539)
T ss_pred HHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHHHcCCCc
Confidence 35555566668764 2357788898887665543211 112455678889999999999988
Q ss_pred -eEEEecCC--CCCCCCHHHHHHHhhcC-----CceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccC-C
Q 014492 193 -AVVKVPRK--SDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSG-L 262 (423)
Q Consensus 193 -~~~~v~~~--~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~-~ 262 (423)
+++.||.+ .++.+|+++|+++|.+. .|-+|+.+-....||.+-|+++|.+||+. |+|+.+|.+|+.+.. .
T Consensus 254 ~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlHVDaA~GG~al~~ 333 (539)
T PLN02590 254 ENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACIC 333 (539)
T ss_pred ccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCeEEEecchhhhhhcC
Confidence 58888876 46789999999999632 35567777888899999999999999998 999999999997652 1
Q ss_pred Cchhhhhcc-CCcEEEEccChhhhcccCccccccccCH--HHHHHHHH------hcC--------C--CC--Cc-HHHHH
Q 014492 263 ESRMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPL--SIIEYLWR------AKQ--------P--YN--VS-VAAEV 320 (423)
Q Consensus 263 ~~~~~~~~~-~~~~i~i~S~SK~~g~~G~R~G~i~~~~--~~~~~l~~------~~~--------~--~~--~~-~~~~~ 320 (423)
+.....+.. ....=+...++|. +....-+|.++... .+.+.+.. ... . |+ .+ .+...
T Consensus 334 ~~~r~~~~Gie~ADSit~D~HK~-l~~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsRr~raL 412 (539)
T PLN02590 334 PEYRKFIDGIENADSFNMNAHKW-LFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRFRSL 412 (539)
T ss_pred hhhHHHhcCCccCCEEEECchhh-cCcCcCEEEEEecCHHHHHHHhhcCHHHhCCcccccccCCCccccCCCCCCchHHH
Confidence 221121211 1122455678995 45777788777753 22222210 000 0 11 11 12222
Q ss_pred HHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCC-CCC-------HHHHHHHHHhCCcE
Q 014492 321 AACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS-GMD-------AKKLKDDLAKMGVM 389 (423)
Q Consensus 321 a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~-~~~-------~~~l~~~L~~~gI~ 389 (423)
.+...|+. .+.++++.++.-++.+++.+.|++.+.+.+ .+..-+.+.+++.. +.+ ..++.++|.+.|..
T Consensus 413 klW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~l~iVcFr~~~~~~~~~~~~~ln~~l~~~l~~~G~~ 492 (539)
T PLN02590 413 KLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLVCFRLAPVDGDEDQCNERNRELLAAVNSTGKI 492 (539)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhCCCE
Confidence 23333332 345778888888899999999988876664 44455556666642 222 13566677666765
Q ss_pred EEeCCCCCCCCeEEEEecC-hhhHHHHHHHHhh
Q 014492 390 IRHYNNKELKGYVRVSVGK-PEHTDALMECLMH 421 (423)
Q Consensus 390 v~~~~~~~~~~~iRis~~~-~~~~~~l~~al~~ 421 (423)
......-.+..++|+++.. ..+.+++..+++.
T Consensus 493 ~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~ 525 (539)
T PLN02590 493 FISHTALSGKFVLRFAVGAPLTEEKHVTEAWQI 525 (539)
T ss_pred EEEeeEECCEEEEEEEecCCCCCHHHHHHHHHH
Confidence 5544433445699999852 2223444444443
No 356
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.48 E-value=2.8e-11 Score=120.60 Aligned_cols=315 Identities=14% Similarity=0.142 Sum_probs=179.7
Q ss_pred CCCCeeEcCCC--CCCCC-CCHHHHH--HHhc-CC-----CC--CCCCCcchHHHHHHHHHHhC-CCCCcEEEeCCHHHH
Q 014492 93 KPEDIVKIDAN--ENPYG-PPPEVRE--ALGQ-LK-----FP--YIYPDPESRRLRAALAKDSG-LESDHILVGCGADEL 158 (423)
Q Consensus 93 ~~~~~i~l~~~--~~~~~-~~~~v~~--al~~-~~-----~~--~~Y~~~g~~~lr~~ia~~~g-~~~~~i~~t~G~~~a 158 (423)
+++.++|+..+ ...++ .+|+|.+ ++.+ +. .. ..|......++-+.+++..+ -..+.++++++++|+
T Consensus 43 dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~~~la~~l~~~~~p~~~~~v~f~~SGsEA 122 (443)
T PRK08297 43 TGRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPSNSDVYTVEMARFVDTFARVLGDPELPHLFFVDGGALA 122 (443)
T ss_pred CCCEeeecccCHhhhcCCCCChHHhhHHHHHHHHHHhhhhccccCCcCCHHHHHHHHHHHhhcCCCCCCEEEEeCchHHH
Confidence 57788998766 33344 3678887 7765 21 11 12333344566677776652 234699999999999
Q ss_pred HHHHHHHhc----------C---C-CCeEEEcCCCchhhHHHHHH-CCCeE-----------EEecCCC------CCC--
Q 014492 159 IDLIMRCVL----------D---P-GDKIVDCPPTFTMYEFDAAV-NGAAV-----------VKVPRKS------DFS-- 204 (423)
Q Consensus 159 l~~~~~~l~----------~---~-gd~Vl~~~p~y~~~~~~~~~-~g~~~-----------~~v~~~~------~~~-- 204 (423)
++.+++... . + ..+|+....+|++....+-. .|... ..+|... +..
T Consensus 123 ve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (443)
T PRK08297 123 VENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLE 202 (443)
T ss_pred HHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCcccccc
Confidence 999998542 1 1 25799889888755443332 22110 0011000 000
Q ss_pred -------CCHHHHHHHhhc--CCceEEEEcCCCCCcCcC-CCHHHHHH---HHcC-CCEEEEccCCccccCCCchh--hh
Q 014492 205 -------LNVELIADAVER--EKPKCIFLTSPNNPDGSI-INDEDLLK---ILEM-PILVVLDEAYTEFSGLESRM--EW 268 (423)
Q Consensus 205 -------~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~-~~~~~l~~---i~~~-~~~li~Deay~~~~~~~~~~--~~ 268 (423)
-+++++++.+.+ .++.+|++...+...|.+ .|.+.+++ +|+. |+++|.||++..|...+... ..
T Consensus 203 ~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~ 282 (443)
T PRK08297 203 EVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQ 282 (443)
T ss_pred hhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchHHHHHh
Confidence 023555666642 568888888666666765 45555554 5554 99999999998875433221 12
Q ss_pred hccCCcEEEEccChhhhcccCccccccccCHHHHHHH---H----HhcCCCCCcHHHHHHHHHHhCC---hHHHHHHHHH
Q 014492 269 VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYL---W----RAKQPYNVSVAAEVAACAALQN---PIYLEKVKEA 338 (423)
Q Consensus 269 ~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l---~----~~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~ 338 (423)
.+..+.++ +++|.+++ |.++..+++.+.. . .....|+.++++..++.+.|+- ++.+++..+.
T Consensus 283 ~gv~PDiv---~~gK~l~~-----~a~l~~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~ 354 (443)
T PRK08297 283 LGVRPDIV---AFGKKTQV-----CGIMAGRRVDEVEDNVFAVSSRINSTWGGNLVDMVRARRILEVIEEDGLVENAARQ 354 (443)
T ss_pred cCCCCCEE---Eecccccc-----cceecchHHHHhhhhhccCccccCCCCCccHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 22233333 36898642 3333344332211 1 1223467788888888877763 2334444444
Q ss_pred HHHHHHHHHHHHccCCCCe-ecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC---hhhHHH
Q 014492 339 LIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK---PEHTDA 414 (423)
Q Consensus 339 ~~~~~~~l~~~L~~~~~~~-~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~---~~~~~~ 414 (423)
-+..++.|.+..++.+.+. -..+.|.++.+++++......+++.|.++||++.+.+ .+.+||+++. .++.++
T Consensus 355 g~~l~~~L~~l~~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~l~~~Gvl~~~~~----~~~lr~~P~l~~t~~eid~ 430 (443)
T PRK08297 355 GEYLLARLEELAAEFPAVVSNVRGRGLMCAFDLPTTADRDEVIRRLWEEGVLVLPCG----ERSIRFRPALTVTTEEIDA 430 (443)
T ss_pred HHHHHHHHHHHHHHCCCcceeeeccceEEEEEecCHHHHHHHHHHHHHCCEEEecCC----CCeEEEECCccCCHHHHHH
Confidence 3444444444333445332 2235678888888643345678888899999998754 3679997653 344444
Q ss_pred HHHHH
Q 014492 415 LMECL 419 (423)
Q Consensus 415 l~~al 419 (423)
+.+++
T Consensus 431 ~l~~l 435 (443)
T PRK08297 431 AIDAL 435 (443)
T ss_pred HHHHH
Confidence 44444
No 357
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.46 E-value=5.6e-12 Score=116.87 Aligned_cols=192 Identities=21% Similarity=0.267 Sum_probs=127.8
Q ss_pred HHHHHHHhcC-------C--CCCCCCCcchHHHHHHHHHHhCCCCCcEEE--eCCHHHHHHHHHHHhcCCCCeEEE-cCC
Q 014492 111 PEVREALGQL-------K--FPYIYPDPESRRLRAALAKDSGLESDHILV--GCGADELIDLIMRCVLDPGDKIVD-CPP 178 (423)
Q Consensus 111 ~~v~~al~~~-------~--~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~--t~G~~~al~~~~~~l~~~gd~Vl~-~~p 178 (423)
..|++|+++. . .+++|.|.|-+.|++-.|+.||.+ +.++= --++|+||..++..+++|||+.+. .-.
T Consensus 27 ~KVL~Af~~~~vs~~hf~~tTGYGY~D~GRd~le~iyA~vfgaE-~ALVRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG~ 105 (403)
T PF06838_consen 27 LKVLKAFQENRVSDSHFAGTTGYGYDDIGRDKLERIYADVFGAE-DALVRPQFVSGTHAIALALFGVLRPGDELLSITGK 105 (403)
T ss_dssp HHHHHHHHHTT--GGGCS---TT-TT-HHHHHHHHHHHHHCT-S-EEEEETTS-SHHHHHHHHHHHH--TT-EEEESSSS
T ss_pred HHHHHHHHHcCCChhhcCCCCcCCCCCccHHHHHHHHHHHhCch-hhhhcccccchHHHHHHHHHhcCCCCCeEEEcCCC
Confidence 4566777652 1 236678888899999999999953 23331 235678999999999999999884 444
Q ss_pred CchhhHHHH----------HHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEc-CCCCCcCcCCCHHHHHHHHcC-
Q 014492 179 TFTMYEFDA----------AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNNPDGSIINDEDLLKILEM- 246 (423)
Q Consensus 179 ~y~~~~~~~----------~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~-~p~NPtG~~~~~~~l~~i~~~- 246 (423)
-|....... +.+|++...+++.++..+|.+.++++++ +++|+++|. +--.-+=..++.++|+++++.
T Consensus 106 PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v~L~~dg~~D~~~i~~~~~-~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~v 184 (403)
T PF06838_consen 106 PYDTLEEVIGIRGNGPGSLKEFGIKYREVPLTEDGTIDWEAIKKALK-PNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFV 184 (403)
T ss_dssp --CCHHHHHTSSSSSSSSTGGGT-EEEE--B-TTSSB-HHHHHHHHH-TTEEEEEEE-S-TTSSS----HHHHHHHHHHH
T ss_pred chhhHHHHhCCCCCCCCChHHhCceeEEEeecCCCCcCHHHHHHhhc-cCceEEEEecCCCCCCCCCCCHHHHHHHHHHH
Confidence 454444333 4578999999988888999999999998 799999997 655555566889999999874
Q ss_pred -----CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCcc--ccccccCHHHHHHHHHhc
Q 014492 247 -----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLR--VGYGAFPLSIIEYLWRAK 309 (423)
Q Consensus 247 -----~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R--~G~i~~~~~~~~~l~~~~ 309 (423)
++++++|.+|.+|.....+... +..++.+|+=|..| .|+- -||+++.++++++.....
T Consensus 185 k~~~p~~iifVDNCYGEFvE~~EP~~v----GADl~aGSLIKNpG-GgiAptGGYIaGr~~lVe~~a~RL 249 (403)
T PF06838_consen 185 KEINPDVIIFVDNCYGEFVETQEPTEV----GADLMAGSLIKNPG-GGIAPTGGYIAGRKDLVERAAYRL 249 (403)
T ss_dssp HHH-TTSEEEEE-TTTTTTSSS-GGGG----T-SEEEEETTSGGG-TTT-SS-EEEEESHHHHHHHHHHH
T ss_pred HhhCCCeEEEEeCCcceeccccCcccc----chhheeccceeCCC-CCccCcCCEEechHHHHHHHHhhh
Confidence 8999999999999865443332 33499999999876 4432 379999999999876543
No 358
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.46 E-value=3.1e-11 Score=128.59 Aligned_cols=299 Identities=15% Similarity=0.130 Sum_probs=192.6
Q ss_pred CCCCCCCCCCHHHHHHHhcCC-CC---CCC-CC--cc----hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh-cC
Q 014492 101 DANENPYGPPPEVREALGQLK-FP---YIY-PD--PE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LD 168 (423)
Q Consensus 101 ~~~~~~~~~~~~v~~al~~~~-~~---~~Y-~~--~g----~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l-~~ 168 (423)
+.|..+.-.|+.+.+++.+.. .. +.| |. .| ..+++..++++.|++++++.++.|++.+.+.++.++ +.
T Consensus 109 G~G~y~~~~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~LtG~~~anaSL~d~aTAaaea~~~a~~~~ 188 (993)
T PLN02414 109 GMGYYNTHVPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAEAMAMCNNIL 188 (993)
T ss_pred CCCCCCccCCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHhCCChhhEeecCChHHHHHHHHHHHhcc
Confidence 334444445667767776532 11 334 32 12 347899999999999999999999999999887666 34
Q ss_pred CC--CeEEEcCCCchhhHHHH----HHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHH
Q 014492 169 PG--DKIVDCPPTFTMYEFDA----AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK 242 (423)
Q Consensus 169 ~g--d~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~ 242 (423)
+| ++|++++..|+.+...+ +..|++++.++.+.. + ... ..+-.+++.+|++ +|.+.+.+++.+
T Consensus 189 ~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~---~------~~~-~~v~~vlvq~P~~-~G~v~dv~~I~~ 257 (993)
T PLN02414 189 KGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDF---D------YSS-GDVCGVLVQYPAT-DGEVLDYAEFVK 257 (993)
T ss_pred cCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhh---c------ccc-CceEEEEEecCCC-CeEEcCHHHHHH
Confidence 44 78999999998665444 457999999985321 1 111 2344555556654 999999999999
Q ss_pred HHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhh---cccCccccccccCHHHHHHHH-Hhc--------
Q 014492 243 ILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRA---GLAGLRVGYGAFPLSIIEYLW-RAK-------- 309 (423)
Q Consensus 243 i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~---g~~G~R~G~i~~~~~~~~~l~-~~~-------- 309 (423)
+++. |+++++ .++..... ........+-++++++..|.. |..|-+.|++.+.+++.+.+. +..
T Consensus 258 ~ah~~GaL~iV-aad~lal~---~l~~pge~GADi~vgsgqKwg~P~G~GGP~aGflavr~~~~r~~PgriVG~s~d~~g 333 (993)
T PLN02414 258 NAHANGVKVVM-ATDLLALT---MLKPPGEWGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRLMPGRIIGVSVDSSG 333 (993)
T ss_pred HHHHcCCEEEE-EECHHHhc---CCCCHhhccCcEEEECCCccccCCCCCCCCeeEEEECHHHHhhCCCcccCcccCCCC
Confidence 9987 999998 44432111 111133455668899988843 123555899998887755432 000
Q ss_pred -C----------------CCCCcHHHHHHHHHHhC-------ChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceE
Q 014492 310 -Q----------------PYNVSVAAEVAACAALQ-------NPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNF 365 (423)
Q Consensus 310 -~----------------~~~~~~~~~~a~~~~l~-------~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~ 365 (423)
. ..+.|..+..++.+++. .+..+++..+++.++..++.+.|++.++....+....-
T Consensus 334 ~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~G~~~~~~~~f~~ 413 (993)
T PLN02414 334 KPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKLGFQVQSLPFFDT 413 (993)
T ss_pred CcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhcCCccCCCCCcCe
Confidence 0 11223322222222221 23447788899999999999999887632223322223
Q ss_pred EEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 366 ILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 366 ~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
+.++++ +..++.++|.++||.++... .+.+|+|+. +.+|++.|.+++..
T Consensus 414 vt~~~~---~~~~v~~~L~~~gI~l~~~~----~~~lrvs~~e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 414 VKVKCS---DADAIADAAAKVGINLRVVD----ANTVTVSFDETTTLEDVDKLFKVFAG 465 (993)
T ss_pred EEEecC---CHHHHHHHHHHCCCeeEEec----CCeEEEEeeccCCHHHHHHHHHHHcc
Confidence 455664 56889999999999888654 467999975 56777888877753
No 359
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.46 E-value=1.6e-11 Score=122.17 Aligned_cols=318 Identities=13% Similarity=0.135 Sum_probs=177.7
Q ss_pred CCCCeeEcCCC--CCCCC-CCHHHH--HHHhc-CCCC----C---CCCCcchHHHHHHHHHHhC-CCCCcEEEeCCHHHH
Q 014492 93 KPEDIVKIDAN--ENPYG-PPPEVR--EALGQ-LKFP----Y---IYPDPESRRLRAALAKDSG-LESDHILVGCGADEL 158 (423)
Q Consensus 93 ~~~~~i~l~~~--~~~~~-~~~~v~--~al~~-~~~~----~---~Y~~~g~~~lr~~ia~~~g-~~~~~i~~t~G~~~a 158 (423)
+++.+||+..+ ...++ .+|.+. +++.+ +... . .+......++-+.+++..+ -..+.+++++++++|
T Consensus 36 dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~f~~sGsEA 115 (431)
T TIGR03251 36 DGRRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAAVNKPSNSDVYTVAMARFVDTFARVLGDPALPHLFFIEGGALA 115 (431)
T ss_pred CCCChhhcccChhhcCCCCCChhhhHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHHHhcCCCCcCEEEEeCCcHHH
Confidence 57788888766 33344 357887 77765 2211 1 1222223445555555542 134689999999999
Q ss_pred HHHHHHHhc----------C-C---CCeEEEcCCCchhhHHHHHH-CCCe-EE------------Eec-----CCCC-CC
Q 014492 159 IDLIMRCVL----------D-P---GDKIVDCPPTFTMYEFDAAV-NGAA-VV------------KVP-----RKSD-FS 204 (423)
Q Consensus 159 l~~~~~~l~----------~-~---gd~Vl~~~p~y~~~~~~~~~-~g~~-~~------------~v~-----~~~~-~~ 204 (423)
++.+++... + + +.+|+...-+|++....+.. .|.. .. ..| .+.. ..
T Consensus 116 ve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 195 (431)
T TIGR03251 116 VENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPNLD 195 (431)
T ss_pred HHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCccccccc
Confidence 999988542 1 1 36799888888755433322 2211 00 011 0000 00
Q ss_pred -------CCHHHHHHHhh--cCCceEEEEcCCCCCcCcCC-CHHHHHH---HHcC-CCEEEEccCCccccCCCchh--hh
Q 014492 205 -------LNVELIADAVE--REKPKCIFLTSPNNPDGSII-NDEDLLK---ILEM-PILVVLDEAYTEFSGLESRM--EW 268 (423)
Q Consensus 205 -------~d~~~l~~~i~--~~~~~~i~l~~p~NPtG~~~-~~~~l~~---i~~~-~~~li~Deay~~~~~~~~~~--~~ 268 (423)
-+++++++.+. ..++.++++...+...|.+. +.+.+++ +|+. |+++|+||++..|...+... ..
T Consensus 196 ~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~ 275 (431)
T TIGR03251 196 QVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQ 275 (431)
T ss_pred hhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchHHHHHh
Confidence 12445555553 25788999887777778765 4444544 5554 99999999999775433221 12
Q ss_pred hccCCcEEEEccChhhhcccCccccccccCH--HHHHHHH----HhcCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHH
Q 014492 269 VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL--SIIEYLW----RAKQPYNVSVAAEVAACAALQN---PIYLEKVKEAL 339 (423)
Q Consensus 269 ~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~--~~~~~l~----~~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~ 339 (423)
.+..+.++ +++|.+ +. .|++.... ++..... .....|+.++++..++.++|+. .+..+...+.-
T Consensus 276 ~gv~PDi~---~~gK~~--~~--~g~~~~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g 348 (431)
T TIGR03251 276 LGVQPDIV---AFGKKT--QV--CGIMAGRRVDEVADNVFAVPSRLNSTWGGNLVDMVRATRILEIIEEERLVDNARVQG 348 (431)
T ss_pred cCCCCCEE---EecccC--cc--ceEEecchHHHhhhhcccCccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 22233333 368875 22 25554332 2222111 1223467788888888877764 23334444444
Q ss_pred HHHHHHHHHHHccCC-CCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHH
Q 014492 340 IKERERLFKLLKDVP-FLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMEC 418 (423)
Q Consensus 340 ~~~~~~l~~~L~~~~-~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~a 418 (423)
+..++.|.+..++.+ .+.-..+.|.++.+++++......+.+.|.++||++.+.+ .+.+||++....+.++++++
T Consensus 349 ~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~l~~~Gvl~~~~g----~~~lr~~P~l~~t~~eid~~ 424 (431)
T TIGR03251 349 AHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPSTADRDEVIRQLYREGVLLLGCG----ERSIRFRPPLTVTREEIDAA 424 (431)
T ss_pred HHHHHHHHHHHHhCccceecccccceeEEEEeCCHHHHHHHHHHHHhCCeEEecCC----CCeEEEECCccCCHHHHHHH
Confidence 445555544334444 2222245577888888643345678888999999997754 36799987643333445544
Q ss_pred Hhh
Q 014492 419 LMH 421 (423)
Q Consensus 419 l~~ 421 (423)
++.
T Consensus 425 l~~ 427 (431)
T TIGR03251 425 IDA 427 (431)
T ss_pred HHH
Confidence 444
No 360
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.44 E-value=4.8e-11 Score=110.96 Aligned_cols=322 Identities=16% Similarity=0.143 Sum_probs=204.3
Q ss_pred CCCCCCeeEcCCCCCC--C-CCCHHHHHHHhc-CC----CCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492 91 GRKPEDIVKIDANENP--Y-GPPPEVREALGQ-LK----FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (423)
Q Consensus 91 ~~~~~~~i~l~~~~~~--~-~~~~~v~~al~~-~~----~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~ 162 (423)
+..++.++|+-.|... . ..+|+|.+++.+ .. ....|-.+-..++-++++..+.-+-+.++++|+++||.+++
T Consensus 46 De~G~ryLD~f~Gi~tvslGHchP~v~~a~~kQl~~l~H~t~~~~~~pi~~~Ae~L~s~~P~~l~~vfF~nsGsEANela 125 (442)
T KOG1404|consen 46 DEEGRRYLDAFGGIVTVSLGHCHPDVVAAAVKQLKKLYHTTSGYLNPPIHDLAEALVSKLPGDLKVVFFVNSGSEANELA 125 (442)
T ss_pred cCCCceeehhhCCeEEEEcCCCChHHHHHHHHhhhhhEEeeccccCCcHHHHHHHHHHhCCCCceEEEEecCCchHHHHH
Confidence 4556777887776432 2 457999988876 21 12456555567888999988865567799999999999999
Q ss_pred HHHhc--CCCCeEEEcCCCchhhHH-HHHHCCCeEEEecCCCC----------------CCCC---------HHHHHHHh
Q 014492 163 MRCVL--DPGDKIVDCPPTFTMYEF-DAAVNGAAVVKVPRKSD----------------FSLN---------VELIADAV 214 (423)
Q Consensus 163 ~~~l~--~~gd~Vl~~~p~y~~~~~-~~~~~g~~~~~v~~~~~----------------~~~d---------~~~l~~~i 214 (423)
+.... ...-.++...-+|+.... .+-..|......+.+.. |+-+ .+++++.+
T Consensus 126 l~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i 205 (442)
T KOG1404|consen 126 LKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLI 205 (442)
T ss_pred HHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHH
Confidence 87432 112356666777753332 22222332222211100 0001 13444444
Q ss_pred h---cCCceEEEEcCCCCCcCcCCC-HHHH---HHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhc
Q 014492 215 E---REKPKCIFLTSPNNPDGSIIN-DEDL---LKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG 286 (423)
Q Consensus 215 ~---~~~~~~i~l~~p~NPtG~~~~-~~~l---~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 286 (423)
. .+.+.+++....+..-|++-. ..-+ .++++. |.+.|.||++..|...+ .+..++.++.+--+.|++|.+|
T Consensus 206 ~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG-~~wgfe~h~v~PDIvTmAKgiG 284 (442)
T KOG1404|consen 206 LYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTG-HMWGFESHGVVPDIVTMAKGIG 284 (442)
T ss_pred HhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhcccccc-ccccccccCCCccHHHHHhhcc
Confidence 2 245667777777877787653 3344 455555 99999999999998766 4444556666667889999999
Q ss_pred ccCccccccccCHHHHHHHHHhcC---CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccC----CCCeec
Q 014492 287 LAGLRVGYGAFPLSIIEYLWRAKQ---PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDV----PFLNPY 359 (423)
Q Consensus 287 ~~G~R~G~i~~~~~~~~~l~~~~~---~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~ 359 (423)
.|+.+|.++..+++.+-+.+... .|+.++++.+++.++|+--+ -++++++.++.-.+|.+.|.++ +.+--.
T Consensus 285 -nG~Pl~AVvtt~EIa~v~~~~~~~fnTyggnP~a~avg~aVL~Vik-ee~LqE~aa~vG~yl~~~l~~l~d~h~iIGdV 362 (442)
T KOG1404|consen 285 -NGFPLGAVVTTPEIADVLNQKSSHFNTYGGNPVACAVGLAVLKVIK-EENLQENAAEVGSYLLEKLAALKDKHPIIGDV 362 (442)
T ss_pred -CCCcceeeecCHHHHHHHHhccccccccCCCchhHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHhhcCCceeec
Confidence 89999999999999998887663 35678888888888886421 1334444455555666655543 333224
Q ss_pred CCCceEEEEEeCCCC---------CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHH
Q 014492 360 PSYSNFILCEVTSGM---------DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALME 417 (423)
Q Consensus 360 p~~~~~~~~~~~~~~---------~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~ 417 (423)
.+.|.++-+++-+.. ....+.+.++++|++|-.++..+ +.+||+.. +.+|.+.+.+
T Consensus 363 RG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i~G--~vfriaPPlciT~edi~f~~~ 430 (442)
T KOG1404|consen 363 RGRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKELGVLVGKGGIHG--NVFRIAPPLCITKEDIDFAVE 430 (442)
T ss_pred ccceeEEEEEEecccCCCCCcchHHHHHHHHHHHHhCeeeecccccc--eEEEecCCeeccHHHHHHHHH
Confidence 567888877774211 13456788889999995555332 39999864 4444444433
No 361
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.43 E-value=8.2e-11 Score=118.76 Aligned_cols=271 Identities=13% Similarity=0.083 Sum_probs=170.5
Q ss_pred EEEeCCHHHHHHHHHHHh----cC----------------------CCCeEEEcCCCchhhHHHHHHCCC---eEEEecC
Q 014492 149 ILVGCGADELIDLIMRCV----LD----------------------PGDKIVDCPPTFTMYEFDAAVNGA---AVVKVPR 199 (423)
Q Consensus 149 i~~t~G~~~al~~~~~~l----~~----------------------~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~ 199 (423)
-++|+|+++++-.++.+- +. ++..|++..-.|......++..|. +++.+|.
T Consensus 162 G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~ 241 (522)
T TIGR03799 162 GAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKT 241 (522)
T ss_pred eEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEe
Confidence 577889998876665432 11 124688888899999999999888 7899998
Q ss_pred CCCCCCCHHHHHHHhhc---CCceEEEEc--CCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCC-Cchhhhhcc-
Q 014492 200 KSDFSLNVELIADAVER---EKPKCIFLT--SPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGL-ESRMEWVKK- 271 (423)
Q Consensus 200 ~~~~~~d~~~l~~~i~~---~~~~~i~l~--~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~-~~~~~~~~~- 271 (423)
++++.+|+++|++.+.+ .+++.+.++ ..++.||.+.|++++.++|+. |+++++|.+|+..... +.....+..
T Consensus 242 d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gl 321 (522)
T TIGR03799 242 DANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGI 321 (522)
T ss_pred CCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCc
Confidence 88889999999998852 345545444 667899999999999999997 9999999999854321 111111221
Q ss_pred CCcEEEEccChhhhcccCccccccccC-HHHHHHHHHh----cC-------C--CCCcHHH-HHHHHHHhCC--hHHHHH
Q 014492 272 HDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRA----KQ-------P--YNVSVAA-EVAACAALQN--PIYLEK 334 (423)
Q Consensus 272 ~~~~i~i~S~SK~~g~~G~R~G~i~~~-~~~~~~l~~~----~~-------~--~~~~~~~-~~a~~~~l~~--~~~~~~ 334 (423)
..-..+..+.+|.++ ....+|+++.. ++..+.+... .. . +..+... ...+..+|+. .+.+++
T Consensus 322 e~aDSit~d~HK~l~-~P~g~G~llvr~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~al~lw~aL~~lG~~G~~~ 400 (522)
T TIGR03799 322 ERADSVTIDAHKQLY-VPMGAGMVLFKDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMAMLVYAGLHIIGRKGYEL 400 (522)
T ss_pred hhCCEEEEChhhcCC-cCcccEEEEEeCHHHHHHhccCcchhcCCCCCccccceeecCcchHHHHHHHHHHHHhHHHHHH
Confidence 233467788999543 44557888774 4444443221 00 0 1111111 1123333332 345788
Q ss_pred HHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEe-CCCC---------------C--H----HHHHHHHHhCCcEEE
Q 014492 335 VKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEV-TSGM---------------D--A----KKLKDDLAKMGVMIR 391 (423)
Q Consensus 335 ~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~-~~~~---------------~--~----~~l~~~L~~~gI~v~ 391 (423)
+.++..++.+++.+.|++.+.+.+ .+..-+.+.+++ |++. + . ..+.+.+.+.|....
T Consensus 401 ii~~~~~la~~l~~~L~~~~~~el~~~p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~v 480 (522)
T TIGR03799 401 LIDQSIEKAKYFADLIQQQPDFELVTEPELCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFV 480 (522)
T ss_pred HHHHHHHHHHHHHHHHhhCCCeEEecCCCccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEE
Confidence 888999999999999998876664 344445555554 3211 0 1 345566666676554
Q ss_pred eCCC-----CCC--CCeEEEEecC-hhhHHHHHHHHh
Q 014492 392 HYNN-----KEL--KGYVRVSVGK-PEHTDALMECLM 420 (423)
Q Consensus 392 ~~~~-----~~~--~~~iRis~~~-~~~~~~l~~al~ 420 (423)
.... ..+ .-.+|+++.. ..+.+++...++
T Consensus 481 s~t~l~~~~~~g~~~~~lR~~~~np~tt~~~i~~~l~ 517 (522)
T TIGR03799 481 SRTRLTPAQYDHQPTVVFRVVLANPLTTHEILQDILD 517 (522)
T ss_pred EEEEecccccCCCCcEEEEEEecCCCCCHHHHHHHHH
Confidence 3221 111 2479999863 223355555554
No 362
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.42 E-value=2.9e-10 Score=110.17 Aligned_cols=320 Identities=17% Similarity=0.172 Sum_probs=196.4
Q ss_pred CCCCeeEcCCC--CCCCC-CCHHHHHHHhc----CCCCCCC---CCcchHHHHHHHHHHhC-CCCCcEEEeCCHHHHHHH
Q 014492 93 KPEDIVKIDAN--ENPYG-PPPEVREALGQ----LKFPYIY---PDPESRRLRAALAKDSG-LESDHILVGCGADELIDL 161 (423)
Q Consensus 93 ~~~~~i~l~~~--~~~~~-~~~~v~~al~~----~~~~~~Y---~~~g~~~lr~~ia~~~g-~~~~~i~~t~G~~~al~~ 161 (423)
.++.++|--++ -+..+ ..|++.+|+.+ +.+.+.+ ..| ..+|-+.|++..+ -+-+.|++++|++++++.
T Consensus 42 ~G~r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l~~~~~~~~t~~P-a~~LA~~L~~~aP~~~l~~vFf~~sGSeAvEt 120 (449)
T COG0161 42 DGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLPHVMFGGFTHEP-AIELAEKLAELAPEGGLDHVFFTDSGSEAVET 120 (449)
T ss_pred CCCEEEecccHHHHhhcCcCCHHHHHHHHHHHHhCCchhhcccCCch-HHHHHHHHHHhCCCCCccEEEEeCCchHHHHH
Confidence 35556665443 12222 35788888765 3332222 122 5678888888886 346899999999999999
Q ss_pred HHHHhc-------CCC-CeEEEcCCCchhhHHHHHHC-C-------------CeEEEecCCC--------CCC----CCH
Q 014492 162 IMRCVL-------DPG-DKIVDCPPTFTMYEFDAAVN-G-------------AAVVKVPRKS--------DFS----LNV 207 (423)
Q Consensus 162 ~~~~l~-------~~g-d~Vl~~~p~y~~~~~~~~~~-g-------------~~~~~v~~~~--------~~~----~d~ 207 (423)
+++... +|. .+++.-...|++-...+-.. | ..+..+|.+. .+. -..
T Consensus 121 AlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a 200 (449)
T COG0161 121 ALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAA 200 (449)
T ss_pred HHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHHHHHHH
Confidence 988542 232 34888888886322222111 1 1122333211 011 225
Q ss_pred HHHHHHhhc---CCceEEEEcCCCCC-cCcCCCH----HHHHHHHcC-CCEEEEccCCccccCCCchhh--hhccCCcEE
Q 014492 208 ELIADAVER---EKPKCIFLTSPNNP-DGSIIND----EDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLI 276 (423)
Q Consensus 208 ~~l~~~i~~---~~~~~i~l~~p~NP-tG~~~~~----~~l~~i~~~-~~~li~Deay~~~~~~~~~~~--~~~~~~~~i 276 (423)
++|++.+.+ +++.++|+.....- .|.+++. +++++||+. |+++|.||+-..|...+.... ..+..+.++
T Consensus 201 ~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~PDi~ 280 (449)
T COG0161 201 DELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFACEHAGIVPDIL 280 (449)
T ss_pred HHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCchhhhhhhcCCCCCee
Confidence 677777765 56778888755544 8877765 356777877 999999999998876554322 222233333
Q ss_pred EEccChhhhcccCccccccccCHHHHHHHHHh-c------CCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHH
Q 014492 277 VLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA-K------QPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERL 346 (423)
Q Consensus 277 ~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~-~------~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l 346 (423)
+++|.+.-.=+.+|.+++.+++.+.+..- . ..|+.++++.+++.+.|+- ++++++.++.-....+.|
T Consensus 281 ---~~aKGLT~GY~Pl~a~l~~~~I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~i~e~e~l~~~~~~~~~~l~~~L 357 (449)
T COG0161 281 ---CLAKGLTGGYLPLSAVLTSDRIYEAFSDGDAGAFMHGHTYSGNPLACAAALANLDILEEEDLLERVAEIGAYLQAGL 357 (449)
T ss_pred ---eecccccccchhhHhHhhhHHHHHHHhcccCCeeccCCccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 35798763337788888899998888764 1 2367889998888877653 445555554444444455
Q ss_pred HHHHccCCCCeecCCCceEEEEEeCCCCC---------HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEe---cChhhHHH
Q 014492 347 FKLLKDVPFLNPYPSYSNFILCEVTSGMD---------AKKLKDDLAKMGVMIRHYNNKELKGYVRVSV---GKPEHTDA 414 (423)
Q Consensus 347 ~~~L~~~~~~~~~p~~~~~~~~~~~~~~~---------~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~---~~~~~~~~ 414 (423)
.+.|.+.+.+.-...-|.+.-+++....+ ...+.+.+.++|++++|.+ +.+=++. .+.++.++
T Consensus 358 ~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~g-----~~i~~~PPliit~~eid~ 432 (449)
T COG0161 358 QAALADHPLVGDVRGLGLIGAIELVADKATKTPFEARVGARVRAAALERGLLIRPLG-----DVIYLMPPLIITREEIDE 432 (449)
T ss_pred HHhcccCCcEEEeeccceEEEEEEecccccccchhhhHHHHHHHHHHHCCeEEeecC-----CEEEEcCCccCCHHHHHH
Confidence 44444444444345677777777753333 4567777889999999985 2344443 25666777
Q ss_pred HHHHHhh
Q 014492 415 LMECLMH 421 (423)
Q Consensus 415 l~~al~~ 421 (423)
+.+++++
T Consensus 433 l~~~l~~ 439 (449)
T COG0161 433 LVDALRE 439 (449)
T ss_pred HHHHHHH
Confidence 7666653
No 363
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.40 E-value=4.7e-11 Score=118.85 Aligned_cols=308 Identities=15% Similarity=0.130 Sum_probs=169.2
Q ss_pred CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCCCCCCCCc--chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHH
Q 014492 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFPYIYPDP--ESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (423)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~~~Y~~~--g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~ 164 (423)
+.+++.+||+..+. ..++ .+|++.+|+.+ +.....+..+ ...++-+.+++.+. ..+.++++++++++++.+++
T Consensus 44 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~la~~l~~~~p-~~~~v~f~~sGseA~e~Alk 122 (431)
T PRK06209 44 DVDGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGCNFTRPSAIELDAAESFLELID-GADMVKFCKNGSDATSAAVR 122 (431)
T ss_pred eCCCCEEEEccccccchhcCCCCHHHHHHHHHHHHhCcCCCCCCHHHHHHHHHHHHhCC-ccceEEEecCHHHHHHHHHH
Confidence 45678899997663 3344 46888888876 3322223222 22356778887764 23689999999999999988
Q ss_pred HhcC-CC-CeEEEc-CCCchhhHHHHH----H-CCCe------EEEecCCCCCCCCHHHHHHHhhc--CCceEEEEcCCC
Q 014492 165 CVLD-PG-DKIVDC-PPTFTMYEFDAA----V-NGAA------VVKVPRKSDFSLNVELIADAVER--EKPKCIFLTSPN 228 (423)
Q Consensus 165 ~l~~-~g-d~Vl~~-~p~y~~~~~~~~----~-~g~~------~~~v~~~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~ 228 (423)
.... .| ..|+.. ...|..+..... . .|.. +..++ .-|++++++.+.. .++.+|++....
T Consensus 123 lAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~l~~~~~~~aavi~Epv~ 197 (431)
T PRK06209 123 LARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFR-----YNDIASLEALFEDHPGRIACVILEPAT 197 (431)
T ss_pred HHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhccccccC-----CCCHHHHHHHHHhCCCCEEEEEEcccc
Confidence 4321 23 445544 233322110000 0 0100 11111 2378999988853 346677765433
Q ss_pred CCcCcCCC---HHHHHHHHcC-CCEEEEccCCccccCCCchhh-hhccCCcEEEEccChhhhcccCccccccccCHHHHH
Q 014492 229 NPDGSIIN---DEDLLKILEM-PILVVLDEAYTEFSGLESRME-WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 303 (423)
Q Consensus 229 NPtG~~~~---~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~-~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~ 303 (423)
|...+ .+++.++|+. |+++|+||++..+........ ..+..+. +.+++|.+| .|+.+|++++++++++
T Consensus 198 ---g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~~g~~~~~gv~PD---i~t~gK~lg-gG~p~~av~~~~~i~~ 270 (431)
T PRK06209 198 ---ADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHMRGAQKLYGIVPD---LSCFGKALG-NGFAVSALAGKREYME 270 (431)
T ss_pred ---CCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCcchhhHHhCCCcc---eeeehhhhc-CCcccEEEEEHHHHHh
Confidence 33444 4566666766 999999999976643221111 1222222 356799998 6889999999998887
Q ss_pred H--HHH--------hcCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEe
Q 014492 304 Y--LWR--------AKQPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEV 370 (423)
Q Consensus 304 ~--l~~--------~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~ 370 (423)
. +.. ....++.++++..++.++|+. ++..++..+.-+..++.+.+...+++........|..+.+.+
T Consensus 271 ~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~~~~~~~~~~vr~~G~~~~~~~ 350 (431)
T PRK06209 271 LGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDEDVIERLHEQGAKLAAGVNEAAAEHGLQDHVRVSGRPCCLTY 350 (431)
T ss_pred hhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeecceEEEEE
Confidence 6 211 122355677777777666643 333444444444445555444444554321121222222221
Q ss_pred ---C-CCCC----HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHh
Q 014492 371 ---T-SGMD----AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLM 420 (423)
Q Consensus 371 ---~-~~~~----~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~ 420 (423)
. .+.. ...+.+.|.++||++.+ ++|+.. +.++++++.++++
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~l~~~Gi~~p~---------l~is~~ht~~dId~~l~~l~ 400 (431)
T PRK06209 351 STLDGNGQPSQAFRTLFLQETIRRGVLMPS---------LVVSYAHGDADIERTIDAVH 400 (431)
T ss_pred ecCCcccCCcHHHHHHHHHHHHHCCccccc---------ccccccCCHHHHHHHHHHHH
Confidence 1 1111 22566778899998632 355432 4445555555554
No 364
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.37 E-value=3.5e-10 Score=119.14 Aligned_cols=316 Identities=15% Similarity=0.185 Sum_probs=188.1
Q ss_pred CeeEcCCC--CCCCC--CCHHHHHHHhc-CC-CCCC----CCCcchHHHHHHHHHHhCCC-CCcEEEeCCHHHHHHHHHH
Q 014492 96 DIVKIDAN--ENPYG--PPPEVREALGQ-LK-FPYI----YPDPESRRLRAALAKDSGLE-SDHILVGCGADELIDLIMR 164 (423)
Q Consensus 96 ~~i~l~~~--~~~~~--~~~~v~~al~~-~~-~~~~----Y~~~g~~~lr~~ia~~~g~~-~~~i~~t~G~~~al~~~~~ 164 (423)
.++|+..+ ...++ .+|++.+|+.+ +. ..+. |......+|-+.|.+..+-. .+.|++++++++|++.+++
T Consensus 366 ~ylD~~sg~w~~~lG~h~~p~I~~Ai~~Qa~rl~hv~~~~~~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeAvE~AlK 445 (817)
T PLN02974 366 QQFDACASWWTQGPDPTLQPELARAVAYAAGRYGHVMFPENVHEPALRAAELLLGGPGKGWASRVFFSDNGSTAIEVALK 445 (817)
T ss_pred eEEEcchhHHHhCCCcCCCHHHHHHHHHHHhhCCccccCccCCHHHHHHHHHHHhccCCCCCCEEEECCchHHHHHHHHH
Confidence 57777655 23444 47999988876 22 2121 12222345666666643311 3589999999999999887
Q ss_pred HhcC---------------------CCCeEEEcCCCchhhHHHHHHCCC----------e-----EEEecCC--------
Q 014492 165 CVLD---------------------PGDKIVDCPPTFTMYEFDAAVNGA----------A-----VVKVPRK-------- 200 (423)
Q Consensus 165 ~l~~---------------------~gd~Vl~~~p~y~~~~~~~~~~g~----------~-----~~~v~~~-------- 200 (423)
...+ ...+|+....+|++-...+-..+. . ...++.+
T Consensus 446 mA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~ 525 (817)
T PLN02974 446 MAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGR 525 (817)
T ss_pred HHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCcccccccc
Confidence 4421 124688888888643332222111 0 0111100
Q ss_pred ------CCC-----------C-----CC------------HHHHHHHhhc-------CCceEEEEcCC-CCCcCcCCC-H
Q 014492 201 ------SDF-----------S-----LN------------VELIADAVER-------EKPKCIFLTSP-NNPDGSIIN-D 237 (423)
Q Consensus 201 ------~~~-----------~-----~d------------~~~l~~~i~~-------~~~~~i~l~~p-~NPtG~~~~-~ 237 (423)
..+ . +| .+.+++.+.+ .++.+|++... +.-.|.+.+ .
T Consensus 526 ~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~ 605 (817)
T PLN02974 526 WNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDP 605 (817)
T ss_pred ccccCCccccccccccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCH
Confidence 000 0 01 2456666642 46778888753 676788764 4
Q ss_pred HH---HHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEEEccChhhhcccC-ccccccccCHHHHHHHHH---
Q 014492 238 ED---LLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWR--- 307 (423)
Q Consensus 238 ~~---l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~--- 307 (423)
+- ++++|+. |+++|.||++..|...+.. ....+..+.++ +++|.++ .| +.+|.+++++++.+.+..
T Consensus 606 ~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv~PDIi---~~gKgLt-gG~~Plaa~l~~~~I~~~f~~~~~ 681 (817)
T PLN02974 606 LFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGCKPDIA---CYAKLLT-GGLVPLAATLATEEVFEAFRGPSK 681 (817)
T ss_pred HHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCCCCCEE---eeccccc-CCCCccEEEEEcHHHHHhhccccc
Confidence 43 4555665 9999999999988644432 22222333333 3679987 78 699999999999988752
Q ss_pred -----hcCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHH----HHHHHHccCCCCeecCCCceEEEEEeCCCC-
Q 014492 308 -----AKQPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERE----RLFKLLKDVPFLNPYPSYSNFILCEVTSGM- 374 (423)
Q Consensus 308 -----~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~----~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~- 374 (423)
....|+.++++.+++.+.|+- ++..+...+..++..+ .+.+.|++.+.+.-...-|.++.+++.+..
T Consensus 682 ~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg~Gl~~~iel~~~~~ 761 (817)
T PLN02974 682 LDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERVVSLGTVLALELDAEGS 761 (817)
T ss_pred cCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEeeeeEEEEEEecCCc
Confidence 223577889998888877753 3333344444444433 343444556655444566788888874311
Q ss_pred -------CHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014492 375 -------DAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM 420 (423)
Q Consensus 375 -------~~~~l~~~L~-~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~ 420 (423)
-+..+.+.+. ++||++++.+ +.||+... .+++.+++.+++.
T Consensus 762 ~~~~~~~~a~~v~~~~~~~~Gl~~r~~G-----nvi~l~pP~~i~~e~l~~~~~~l~ 813 (817)
T PLN02974 762 GSGYSSLYARSVVRRLRREDGIYARPLG-----NVVYLMCGPTTSPETCTRLLRKVY 813 (817)
T ss_pred ccccchHHHHHHHHHHHHhCCEEEEecC-----CEEEEeCCCCCCHHHHHHHHHHHH
Confidence 1346778888 9999999853 67888643 4555566655554
No 365
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.31 E-value=2.1e-09 Score=103.89 Aligned_cols=312 Identities=14% Similarity=0.110 Sum_probs=192.5
Q ss_pred eeEcCCCCCCC-CCCHHHHHHHhcCCCCCCC-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcC-CCCeE
Q 014492 97 IVKIDANENPY-GPPPEVREALGQLKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLD-PGDKI 173 (423)
Q Consensus 97 ~i~l~~~~~~~-~~~~~v~~al~~~~~~~~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~-~gd~V 173 (423)
+|||-+ +... .+.++..++|..-+ ..| .++...+|++.+++++|.+ .+++|..+..+-.++++.+++ +|+.+
T Consensus 43 ~IDLrS-DTgT~apS~~m~aAM~~GD--D~Y~gdpSv~~Lee~vael~G~E--~alpthqGRgaE~Il~~~~~~~~g~e~ 117 (467)
T TIGR02617 43 FIDLLT-DSGTGAVTQSMQAAMMRGD--EAYSGSRSYYALAESVKNIFGYQ--YTIPTHQGRGAEQIYIPVLIKKREQEK 117 (467)
T ss_pred EEECcc-CCCCCCCCHHHHHHHHcCC--cccccCchHHHHHHHHHHHhCCc--eEEECCCCchHHHHHHHhhcccccccc
Confidence 578755 3333 36788888887622 346 6777889999999999964 578887778888889888888 68877
Q ss_pred EEcCC-------Cc-hhhHHHHHHCCCeEEEecC----------CCCCCCCHHHHHHHhhc---CCceEEEEc-CCCCCc
Q 014492 174 VDCPP-------TF-TMYEFDAAVNGAAVVKVPR----------KSDFSLNVELIADAVER---EKPKCIFLT-SPNNPD 231 (423)
Q Consensus 174 l~~~p-------~y-~~~~~~~~~~g~~~~~v~~----------~~~~~~d~~~l~~~i~~---~~~~~i~l~-~p~NPt 231 (423)
.+..+ .| ......+...|+.++.++. +..+.+|++++++.|++ .++-.+... ..|.--
T Consensus 118 g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~tlt~N~~G 197 (467)
T TIGR02617 118 GLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITCNSAG 197 (467)
T ss_pred cccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeeeeEEEecCC
Confidence 75443 11 2233456778999887642 12457999999999974 233333332 113235
Q ss_pred CcCCCHHHHHHHHcC----CCEEEEccCCcc----c------cCCCchhhhh----ccCCcEEEEccChhhhccc-Cccc
Q 014492 232 GSIINDEDLLKILEM----PILVVLDEAYTE----F------SGLESRMEWV----KKHDNLIVLRTFSKRAGLA-GLRV 292 (423)
Q Consensus 232 G~~~~~~~l~~i~~~----~~~li~Deay~~----~------~~~~~~~~~~----~~~~~~i~i~S~SK~~g~~-G~R~ 292 (423)
|+++|.+.++++.+. |+.+++|.+-.. | .+.+.....+ ..+ -+.+..|+||.+|.| |
T Consensus 198 Gqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~-aDsvt~slsKglgApvG--- 273 (467)
T TIGR02617 198 GQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKY-ADMLAMSAKKDAMVPMG--- 273 (467)
T ss_pred CEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhcc-CCEEEEEcCCCCCCccc---
Confidence 789999998887764 999999987532 1 1112222211 122 225566899988766 5
Q ss_pred cccccCHH----HHHHHHHhcC-------CCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCee
Q 014492 293 GYGAFPLS----IIEYLWRAKQ-------PYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNP 358 (423)
Q Consensus 293 G~i~~~~~----~~~~l~~~~~-------~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 358 (423)
|+++++++ +.++.+...- ..+++.-...|+...|.+ .+|+.....+ .++|.+.|.+.+.-.+
T Consensus 274 g~Lag~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~~~~yl~~ri~q----v~yl~~~L~~~Gvpi~ 349 (467)
T TIGR02617 274 GLLCFKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRINQ----VQYLVNGLEEIGVVCQ 349 (467)
T ss_pred ceEEecchhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhcccHHHHHHHHHH----HHHHHHHHHhCCCcEE
Confidence 66766544 2333332211 124566666666655554 4555555554 4466677776553233
Q ss_pred cCCCceEEEEEe-------C-CCCCHHHHHHHHH-hCCcEEEe-CCC-----C-------CCCCeEEEEec----ChhhH
Q 014492 359 YPSYSNFILCEV-------T-SGMDAKKLKDDLA-KMGVMIRH-YNN-----K-------ELKGYVRVSVG----KPEHT 412 (423)
Q Consensus 359 ~p~~~~~~~~~~-------~-~~~~~~~l~~~L~-~~gI~v~~-~~~-----~-------~~~~~iRis~~----~~~~~ 412 (423)
. .+|.-++++. | ....+..+...|- +.||--.. |+. + ..-..+|+++. +..++
T Consensus 350 ~-~Gghav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~~~el~RlaipRrvyt~~h~ 428 (467)
T TIGR02617 350 Q-AGGHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHM 428 (467)
T ss_pred e-cCccEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecceecccCCCCCccCCCccceeeeccccccccHhHH
Confidence 4 5555555532 2 1345778887775 78886542 111 0 11257999975 46678
Q ss_pred HHHHHHHhhh
Q 014492 413 DALMECLMHL 422 (423)
Q Consensus 413 ~~l~~al~~l 422 (423)
|.+.+++..+
T Consensus 429 d~v~~~~~~~ 438 (467)
T TIGR02617 429 DFIIEAFKHV 438 (467)
T ss_pred HHHHHHHHHH
Confidence 8888888765
No 366
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.27 E-value=2.7e-10 Score=105.92 Aligned_cols=317 Identities=15% Similarity=0.104 Sum_probs=200.9
Q ss_pred CCCeeEcCCC-CCCCCCCHHHHHH----HhcCCCC----CC-CCCcc-hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492 94 PEDIVKIDAN-ENPYGPPPEVREA----LGQLKFP----YI-YPDPE-SRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (423)
Q Consensus 94 ~~~~i~l~~~-~~~~~~~~~v~~a----l~~~~~~----~~-Y~~~g-~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~ 162 (423)
++++++|... --.+.-.+++.+. +++...+ .+ |++-. ..++++.||+++|+ ++.|+.+.|-+ ++..+
T Consensus 93 G~~~~N~aS~NfL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G~-E~aivYs~gF~-ti~S~ 170 (467)
T KOG1358|consen 93 GKDVLNFASANFLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMGT-EDAIVYSYGFS-TIESA 170 (467)
T ss_pred CceeecccchhhhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhCC-cceeeeccccc-hhhhc
Confidence 5567777553 2334445555543 3343222 22 55543 56899999999996 57888888876 66777
Q ss_pred HHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcC--------C----ceEEEEcCCCCC
Q 014492 163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE--------K----PKCIFLTSPNNP 230 (423)
Q Consensus 163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~--------~----~~~i~l~~p~NP 230 (423)
+.+++..||.|.+..-.........+...-.++.+. ..|.+.+++.+.+. + -+.|++..-.-+
T Consensus 171 ipafsKrGDIi~~de~~nfaIq~GlqlSRS~i~~Fk-----hndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N 245 (467)
T KOG1358|consen 171 IPAFSKRGDIIFVDEAVNFAIQKGLQLSRSTISYFK-----HNDMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYAN 245 (467)
T ss_pred chhhhccCcEEEEehhhhHHHHHHHhhhhheeEEec-----CCCHHHHHHhccCcchhhhhccccccceEEEEEEeeccC
Confidence 788999999998887777667776676666777765 33566666655321 1 235666677777
Q ss_pred cCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCch---h--hhhccCCcEEEEccChhhhcccCccccccccCHHHHHH
Q 014492 231 DGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESR---M--EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY 304 (423)
Q Consensus 231 tG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~---~--~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~ 304 (423)
||.+.+..++.++... ...||+||.|+...-+... . ...+..+-.++++|+.-+++..| |+..++.-++ .
T Consensus 246 ~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~G---gFc~G~~~i~-~ 321 (467)
T KOG1358|consen 246 TGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALASGG---GFCAGKSFIA-D 321 (467)
T ss_pred CCcccccHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccccccC---ceeecceeeE-e
Confidence 9999999999999987 9999999999865532211 1 11223456789999988887666 8887744333 2
Q ss_pred HHHhcC-C--C--CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCC--C--C
Q 014492 305 LWRAKQ-P--Y--NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS--G--M 374 (423)
Q Consensus 305 l~~~~~-~--~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~--~--~ 374 (423)
..+... . | +.++....++..++.-.+|-.++.+.++.....+-+.|....+..+ ....+..+.+.+.+ + .
T Consensus 322 hQrLSg~~Y~fSAslPp~la~aa~~ai~i~~~~p~~~~~L~~k~~~~H~~l~~~s~~~v~~~~~SPi~hl~l~~~~~s~e 401 (467)
T KOG1358|consen 322 HQRLSGSGYCFSASLPPYLAGAAIKAILIEEWNPEIVQPLRAKVAKFHAALSSNSGFIVSGSPESPIIHLQLERSYGSRE 401 (467)
T ss_pred eeeccccceeeeccCchhhhhhHHHHHHHHhhCcchhhhhhccccccchhhhcCCceEEecCcCCceeeeeecccccchH
Confidence 333322 2 2 4566666777777766666556666666666667777776654443 33455566666642 1 1
Q ss_pred C----HHHHHHHHHhCCcEEEeCCC------CCCCCeEEEEecChhhHHHHHHHHhh
Q 014492 375 D----AKKLKDDLAKMGVMIRHYNN------KELKGYVRVSVGKPEHTDALMECLMH 421 (423)
Q Consensus 375 ~----~~~l~~~L~~~gI~v~~~~~------~~~~~~iRis~~~~~~~~~l~~al~~ 421 (423)
+ -+++.+.+..+|+.+..... ...+..+||++......+++.++...
T Consensus 402 ~e~~lL~eivd~~i~~~~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~~~ 458 (467)
T KOG1358|consen 402 KEEKLLEEIVDKCIAEGVLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAAEL 458 (467)
T ss_pred HHHHHHHHHHHHHHhhcceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHHHHH
Confidence 1 24555665545888864322 34566899999754444555555443
No 367
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.26 E-value=2.4e-09 Score=100.44 Aligned_cols=277 Identities=19% Similarity=0.211 Sum_probs=179.9
Q ss_pred hCCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CC-CCCC---CCCcchHHHHHHHHHHhCC-CCCcEEEeCCHHHHHH
Q 014492 90 LGRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LK-FPYI---YPDPESRRLRAALAKDSGL-ESDHILVGCGADELID 160 (423)
Q Consensus 90 ~~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~-~~~~---Y~~~g~~~lr~~ia~~~g~-~~~~i~~t~G~~~al~ 160 (423)
++..+.++||+.++- ..++ ..|++.+++.+ +. ..+. |-.-..-++.+.+.+..+- ..+.|++.+++++|++
T Consensus 51 ~D~~g~EyiD~~ssw~~~~~Ghanpev~ral~~q~~k~~hs~~~~~t~eav~l~~~l~~~~~~~~~~rvff~nsGTeAne 130 (433)
T KOG1401|consen 51 FDPDGKEYIDFTSSWAVTILGHANPEVARALAEQAKKLGHSSNGYFTLEAVELEEVLSAVLGKGSAERVFFCNSGTEANE 130 (433)
T ss_pred ecCCcceeeeeccceeccccCCCCHHHHHHHHHHHhhheeccCccccHHHHHHHHHHHhcccCCCccEEEEecCCcHHHH
Confidence 445567889987652 2232 36899988876 32 1121 2111134566666666632 5789999999999999
Q ss_pred HHHHHhcC---CC-----CeEEEcCCCchhhHHHH-HHCCCeEEEecCC---CC----CCCCHHHHHHHhhcCC--ceEE
Q 014492 161 LIMRCVLD---PG-----DKIVDCPPTFTMYEFDA-AVNGAAVVKVPRK---SD----FSLNVELIADAVEREK--PKCI 222 (423)
Q Consensus 161 ~~~~~l~~---~g-----d~Vl~~~p~y~~~~~~~-~~~g~~~~~v~~~---~~----~~~d~~~l~~~i~~~~--~~~i 222 (423)
.++..-.+ .+ .+|+....+|+.-...+ ...+......|.+ ++ ..-|..++++.++.++ +.+|
T Consensus 131 ~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~~IaAV 210 (433)
T KOG1401|consen 131 TALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKGEIAAV 210 (433)
T ss_pred HHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHHhCCCceEEE
Confidence 99874321 11 24888888886433222 2233333333321 11 1236899999987543 7899
Q ss_pred EEcCCCCCcCcCC-CHHHHH---HHHcC-CCEEEEccCCccccCCCc--hhhhhccCCcEEEEccChhhhcccCcccccc
Q 014492 223 FLTSPNNPDGSII-NDEDLL---KILEM-PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYG 295 (423)
Q Consensus 223 ~l~~p~NPtG~~~-~~~~l~---~i~~~-~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i 295 (423)
|+...+---|... +++.+. .+|+. ++++|.||++-.|...+. ....+...+.+ .++.|.++ .|+.+|..
T Consensus 211 IvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~~PDI---~t~aK~L~-gGlPigA~ 286 (433)
T KOG1401|consen 211 IVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGVTPDI---TTVAKPLG-GGLPIGAT 286 (433)
T ss_pred EEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhCcCCcc---eeehhhcc-CCceeEEE
Confidence 9887777677655 444444 44555 999999999998764332 12223333333 34679988 89999999
Q ss_pred ccCHHHHHHHHHhcC-----CCCCcHHHHHHHHHHhC---ChHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEE
Q 014492 296 AFPLSIIEYLWRAKQ-----PYNVSVAAEVAACAALQ---NPIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFI 366 (423)
Q Consensus 296 ~~~~~~~~~l~~~~~-----~~~~~~~~~~a~~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~ 366 (423)
+++.++.+.+..-.. .|+.++++..++...++ ++++++++.+.-+..++.+.+.+.+.+.... .-..+.++
T Consensus 287 ~v~~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k~vs~~~k~L~~~l~e~~~~~~~~i~g~~grgl~i 366 (433)
T KOG1401|consen 287 GVRDKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPETLKNVSKIGKELRKLLDEYLKKTPNSICGGVGRGLVI 366 (433)
T ss_pred eehHHHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccCCCceeeeeeeEEEE
Confidence 999999988864332 47788888888887765 5789999999999999999999987653332 24556666
Q ss_pred EEEe
Q 014492 367 LCEV 370 (423)
Q Consensus 367 ~~~~ 370 (423)
.+.+
T Consensus 367 g~~~ 370 (433)
T KOG1401|consen 367 GFEF 370 (433)
T ss_pred EEEE
Confidence 5544
No 368
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.21 E-value=8.6e-09 Score=93.97 Aligned_cols=258 Identities=14% Similarity=0.084 Sum_probs=174.5
Q ss_pred HHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcC--CCCeEEEcC-CCch----hhHHHHHHCCCeEEEecCCCCCC
Q 014492 132 RRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLD--PGDKIVDCP-PTFT----MYEFDAAVNGAAVVKVPRKSDFS 204 (423)
Q Consensus 132 ~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~--~gd~Vl~~~-p~y~----~~~~~~~~~g~~~~~v~~~~~~~ 204 (423)
+.+-..++...|..+.+++++.+++-.++.++.+.++ +|+.||+++ -+|+ .....++..|.. .+-...
T Consensus 79 ~~lgdklApLiGA~~~Evvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~-----~~~~~~ 153 (407)
T COG3844 79 ERLGDKLAPLIGARAGEVVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG-----YDLEGV 153 (407)
T ss_pred hHHHHHhhhhhcCCCCceEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhccc-----ccceee
Confidence 4577888888999999999999999999888887754 477777654 3454 233344444433 122235
Q ss_pred CCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChh
Q 014492 205 LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSK 283 (423)
Q Consensus 205 ~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK 283 (423)
++++++++.+. .++.+|++++.|.-||+.++..++.++++. |++++-|-+|+-... ...+...+..+-|++--|
T Consensus 154 ~~P~~~~~~~~-dd~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGav----p~~Lh~~gaDfaigcsyK 228 (407)
T COG3844 154 IAPRALEEAIT-DDVAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGAV----PVDLHAAGADFAIGCSYK 228 (407)
T ss_pred eChHHHHHhhc-cceEEEEeccccccccceeeHHHHHHHHHhcCceEEeehhcccCCc----ceeecccCCCeeeeeece
Confidence 56789999997 789999999999999999999999999997 999999999984432 222334455577777778
Q ss_pred hhc-ccCccccccccCHHHHHHHHHhcC-------------------------CCCCcHHHHHHHHHHhCCh--HHHHHH
Q 014492 284 RAG-LAGLRVGYGAFPLSIIEYLWRAKQ-------------------------PYNVSVAAEVAACAALQNP--IYLEKV 335 (423)
Q Consensus 284 ~~g-~~G~R~G~i~~~~~~~~~l~~~~~-------------------------~~~~~~~~~~a~~~~l~~~--~~~~~~ 335 (423)
-++ -||- .+++...++..+....... ..+.+.++..+...+|+-. --+.++
T Consensus 229 YLNgGPGa-pa~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~l 307 (407)
T COG3844 229 YLNGGPGA-PAGLFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITEL 307 (407)
T ss_pred eccCCCCC-ceeEEeccccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHH
Confidence 653 2343 3344443333332221110 0234556666666666531 116788
Q ss_pred HHHHHHHHHHHHHHHccC-C--CCe-ecC----CCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec
Q 014492 336 KEALIKERERLFKLLKDV-P--FLN-PYP----SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG 407 (423)
Q Consensus 336 ~~~~~~~~~~l~~~L~~~-~--~~~-~~p----~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~ 407 (423)
+++--...+++++.++.. + +.. ..| ..|..+.+..| ...+++++|.++||..-.-. ++.+|+.++
T Consensus 308 R~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp---~~~~V~qaLi~rGVigD~R~----P~vlRfgft 380 (407)
T COG3844 308 RKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHP---HGYQVMQALIDRGVIGDFRE----PDVLRFGFT 380 (407)
T ss_pred HHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecC---cHHHHHHHHHHcCccccccC----CCeeeecCc
Confidence 888888888888877652 1 222 233 34667777776 67899999999999865433 678999875
No 369
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.20 E-value=1.4e-08 Score=107.36 Aligned_cols=295 Identities=16% Similarity=0.140 Sum_probs=186.7
Q ss_pred CCCCCCCCCCHHHHHHHhcCCC-CC---CC-CC--cc----hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhc--
Q 014492 101 DANENPYGPPPEVREALGQLKF-PY---IY-PD--PE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL-- 167 (423)
Q Consensus 101 ~~~~~~~~~~~~v~~al~~~~~-~~---~Y-~~--~g----~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~-- 167 (423)
+.|..+.-.|+.+.+.+.+... .. -| |. .| .-+++..++++.|.+..|.-+..+++.+.+.++.+.-
T Consensus 70 g~G~y~~~~p~~i~r~v~~~p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa~~~a~~~~ 149 (939)
T TIGR00461 70 GMGYYGTILPPVIQRNLLENPGWYTAYTPYQPEISQGRLEALLNFQTVVSDLTGLPVANASLLDEGTAAAEAMALSFNVS 149 (939)
T ss_pred CCCcCCCcCChHHHHHHHhCchhhhcCCCCChhhhhHHHHHHHHHHHHHHHHHCCChhhhhccchhhHHHHHHHHHHHhh
Confidence 4444445456777756654321 12 23 21 12 2378899999999988888888888888776665532
Q ss_pred -CCCCeEEEcCCCchhhHHHH----HHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHH
Q 014492 168 -DPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK 242 (423)
Q Consensus 168 -~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~ 242 (423)
+++++|++++-.|+.+.... +..|.+++.++ +++|++.+ ++.++++.+|+. .|.+.+.+++.+
T Consensus 150 ~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~--------~~~l~~~~---~~~~v~~q~Pn~-~G~ied~~~i~~ 217 (939)
T TIGR00461 150 KKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD--------CSDIKKAV---DVFGCLLQYPAT-DGSILDYKQLID 217 (939)
T ss_pred cCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEc--------HHHHhhcC---CEEEEEEECCCC-CeEEecHHHHHH
Confidence 23478999999998766444 46899988874 34555544 467888889987 899999999988
Q ss_pred HHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhccc----CccccccccCHHHHHHHH-----------
Q 014492 243 ILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLA----GLRVGYGAFPLSIIEYLW----------- 306 (423)
Q Consensus 243 i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~----G~R~G~i~~~~~~~~~l~----------- 306 (423)
+++. |.+++++.-...+.. .....+.+-+|++++- |.||+| |--.|++.+.+++.+.+-
T Consensus 218 ~~h~~gal~~~~ad~~al~l----l~~Pge~GaDi~vg~~-q~fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~ 292 (939)
T TIGR00461 218 ALHSHKSLVSVAADLMALTL----LTPPGHYGADIVLGSS-QRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDAL 292 (939)
T ss_pred HHHHcCCEEEEEechHHhCC----cCCHHHcCCcEEeeCC-CccCCCCCCCCCceeeeeecHhhHhhCCCCceeEEecCC
Confidence 8887 888888543222221 1112234555776654 446542 444788877776665432
Q ss_pred -----------------HhcCCCCC-cH--H-HHH-HHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCce
Q 014492 307 -----------------RAKQPYNV-SV--A-AEV-AACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSN 364 (423)
Q Consensus 307 -----------------~~~~~~~~-~~--~-~~~-a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~ 364 (423)
+.+...++ .. + +.. +++..+..++.++++.++...+..++.+.|++.+...+.+ .+
T Consensus 293 G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~G~~~~~~--~f 370 (939)
T TIGR00461 293 GNTALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLENDPHELINK--TW 370 (939)
T ss_pred CCccceeecccccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC--Cc
Confidence 00001111 11 1 111 1122333467788999999999999999999866433333 33
Q ss_pred E--EEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHH
Q 014492 365 F--ILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECL 419 (423)
Q Consensus 365 ~--~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al 419 (423)
| +.++++ ..+++++.+.|.++||.++... ++.+++|+. +.++++.|.+++
T Consensus 371 F~~~~v~~~-~~~~~~i~~~~~~~gi~l~~~~----~~~i~~s~~E~~t~~di~~l~~~~ 425 (939)
T TIGR00461 371 FDTLTVKVG-NGISSELLKAAEEFNINLRAVD----TTTVGIALDETTTKADVENLLKVF 425 (939)
T ss_pred cceEEEEeC-CCCHHHHHHHHHHCCCeeeecC----CCEEEEEeecCCCHHHHHHHHHHh
Confidence 4 445553 3568899999999999988743 468999986 455555555555
No 370
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.19 E-value=2e-09 Score=98.03 Aligned_cols=317 Identities=16% Similarity=0.152 Sum_probs=202.5
Q ss_pred hCCCCCCeeEcCCCC---CCCCCCHHHHHHHhcC-CC---C-C-CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHH
Q 014492 90 LGRKPEDIVKIDANE---NPYGPPPEVREALGQL-KF---P-Y-IYPDPESRRLRAALAKDSGLESDHILVGCGADELID 160 (423)
Q Consensus 90 ~~~~~~~~i~l~~~~---~~~~~~~~v~~al~~~-~~---~-~-~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~ 160 (423)
|+.++..++||=.+. |--..+|.+.+++.+. +. . . .|.+ -..++.+-+.+++|. +-++.++.+.|+.+
T Consensus 54 wD~eGk~ylDflsaysaVnqGhchpki~~aLqeq~~kLtlssrafYnd-~~~~f~~~vt~lf~~--~kvlpmnTGaEa~E 130 (427)
T KOG1402|consen 54 WDPEGKEYLDFLSAYSAVNQGHCHPKIIKALQEQADKLTLSSRAFYND-VLGEFAEYVTKLFGY--DKVLPMNTGAEAVE 130 (427)
T ss_pred ECCCccchhhhhhhhhhcccCCCCHHHHHHHHHHHhHhhhhhHHHhhh-hHHHHHHHHHHhcCc--ceeeecccchhHHH
Confidence 455677777775553 3345689999999862 21 1 1 1322 245778888888885 56888888899999
Q ss_pred HHHHHhc------C--CC-C-eEEEcCCCchhhHHHH----------HHCCC----eEEEecCCCCCCCCHHHHHHHhhc
Q 014492 161 LIMRCVL------D--PG-D-KIVDCPPTFTMYEFDA----------AVNGA----AVVKVPRKSDFSLNVELIADAVER 216 (423)
Q Consensus 161 ~~~~~l~------~--~g-d-~Vl~~~p~y~~~~~~~----------~~~g~----~~~~v~~~~~~~~d~~~l~~~i~~ 216 (423)
.++.... + |. . .|+.....|++-...+ +.+|- .+..|| --|.++|+.+++.
T Consensus 131 ta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~-----Y~d~eale~~l~~ 205 (427)
T KOG1402|consen 131 TACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVP-----YGDAEALEVALKS 205 (427)
T ss_pred HHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeec-----cCCHHHHHHHhcC
Confidence 9887331 1 32 2 3443444443211111 11110 011111 1268999999988
Q ss_pred CCceEEEEcCCCCCcCcCCCHH----HHHHHHcC-CCEEEEccCCccccCCCchh--hhhccCCcEEEEccChhhhcccC
Q 014492 217 EKPKCIFLTSPNNPDGSIINDE----DLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAG 289 (423)
Q Consensus 217 ~~~~~i~l~~p~NPtG~~~~~~----~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~i~S~SK~~g~~G 289 (423)
.+..++++..-+-.-|++.|.+ ...+||.. ++++|.||++......+..+ ..-...+.+++ |.|+++-.=
T Consensus 206 ~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la~d~env~PDivi---lgKalSGG~ 282 (427)
T KOG1402|consen 206 PNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLLACDYENVRPDIVI---LGKALSGGV 282 (427)
T ss_pred CCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEEEeehhhcCCCeEE---EeccccCCe
Confidence 8888999888899999988754 45667776 99999999999877544321 11112233333 459886222
Q ss_pred ccccccccCHHHHHHHHHhc--CCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCC-----CeecCCC
Q 014492 290 LRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPF-----LNPYPSY 362 (423)
Q Consensus 290 ~R~G~i~~~~~~~~~l~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-----~~~~p~~ 362 (423)
+.+..++++++++..+..-. ..|+-|+++..++.++|+--. -++..++-..+-+.++..|.+++. +....+.
T Consensus 283 ~Pvsavl~~~~im~~~~pgeHgsTyggNpLg~~vaiAalevi~-eekL~era~~lG~~l~~~L~~l~~~~p~~v~~VRGr 361 (427)
T KOG1402|consen 283 YPVSAVLADDDIMLNIKPGEHGSTYGGNPLGCAVAIAALEVIV-EEKLVERAAKLGEILRDQLNKLQKKFPHVVKEVRGR 361 (427)
T ss_pred eeeEEEEecHHHHhccCCCccccccCCChHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhccccccchhheeecc
Confidence 56777888888877655432 347889999888888885311 134555556666777777776532 2334677
Q ss_pred ceEEEEEeC----CCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 363 SNFILCEVT----SGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 363 ~~~~~~~~~----~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
|.+..+.+. .+.++-+++-.|.++|++..|.. .+-||++....-..++|.++++.+
T Consensus 362 Gl~~ai~i~~~~~~~~~aw~~cl~lk~~g~LAkptH----~~IiRfaPPL~I~e~dl~eg~e~i 421 (427)
T KOG1402|consen 362 GLLNAIVINPSKTSGQDAWDVCLALKENGLLAKPTH----GNIIRFAPPLVISEEDLREGIEAI 421 (427)
T ss_pred ceEEEEEeccccccchhHHHHHHcccccccccCCCC----CCeEEecCCcccCHHHHHHHHHHH
Confidence 888776663 24667778888889999888765 468999976444447788887765
No 371
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=99.14 E-value=5.8e-09 Score=93.91 Aligned_cols=189 Identities=20% Similarity=0.261 Sum_probs=134.0
Q ss_pred HHHHHHHhcC---------CCCCCCCCcchHHHHHHHHHHhCCCCC--cEEEeCCHHHHHHHHHHHhcCCCCeEEE-cCC
Q 014492 111 PEVREALGQL---------KFPYIYPDPESRRLRAALAKDSGLESD--HILVGCGADELIDLIMRCVLDPGDKIVD-CPP 178 (423)
Q Consensus 111 ~~v~~al~~~---------~~~~~Y~~~g~~~lr~~ia~~~g~~~~--~i~~t~G~~~al~~~~~~l~~~gd~Vl~-~~p 178 (423)
..|++|+++. ..+++|.|-|.+.|.+-.|+.+|.+.. +..+.+|+ +|+..++..+++|||+.+. .--
T Consensus 38 ~kVL~AF~~~rvs~~hf~~stGYGydD~GRdtLe~vyA~vf~aE~a~VRpq~isGT-HAI~~aLfg~LRpgDell~i~G~ 116 (416)
T COG4100 38 KKVLEAFRHHRVSESHFTGSTGYGYDDLGRDTLERVYAQVFGAEAALVRPQIISGT-HAIACALFGILRPGDELLYITGS 116 (416)
T ss_pred HHHHHHHHhcccchhccCCCCCCCccccchhHHHHHHHHHhccccceeeeeeecch-hHHHHHHHhccCCCCeEEEecCC
Confidence 4566777652 123556777888999999999997543 44466665 7999999999999999763 223
Q ss_pred CchhhHH----------HHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEc-CCCCCcCcCCCHHHHHHHHcC-
Q 014492 179 TFTMYEF----------DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNNPDGSIINDEDLLKILEM- 246 (423)
Q Consensus 179 ~y~~~~~----------~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~-~p~NPtG~~~~~~~l~~i~~~- 246 (423)
-|..... ..+.+|+....+|+..+..+|.+.++..++ +++|+|-+. +-..-.--.+++++++++.+.
T Consensus 117 PYDTLeevIG~rg~~~gSL~dfgi~Y~~v~Lt~~gkiD~~~v~~~i~-~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~v 195 (416)
T COG4100 117 PYDTLEEVIGLRGEGQGSLKDFGIKYKAVPLTADGKIDIQAVKTAIS-DRTKLIGIQRSKGYAWRPSLSIAEIEEMITFV 195 (416)
T ss_pred cchhHHHHhccCCCCcccHHHhCcceeecccccCCcccHHHHHHhcC-ccceEEEEEeccCcCCCCcccHHHHHHHHHHH
Confidence 3432222 235578889999988778999999999997 799999986 432222234677888887764
Q ss_pred -----CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCcc--ccccccCHHHHHHHH
Q 014492 247 -----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLR--VGYGAFPLSIIEYLW 306 (423)
Q Consensus 247 -----~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R--~G~i~~~~~~~~~l~ 306 (423)
++++++|.+|.+|.....+.. -+..++.+|+-|.-| .|+- -||+.+..+++++..
T Consensus 196 k~inpn~ivFVDNCYGEFvE~~EPt~----vGaDliAGSLIKNpG-GgiaktGGYiaGk~~~ve~~~ 257 (416)
T COG4100 196 KEINPNVIVFVDNCYGEFVEEKEPTH----VGADLIAGSLIKNPG-GGIAKTGGYIAGKAELVEAAA 257 (416)
T ss_pred HhcCCCEEEEEeccchhhhhccCccc----cchhhhccceeeCCC-CceeeccceeechHHHHHhhc
Confidence 899999999999985433221 233478899999755 3322 379999999988764
No 372
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.14 E-value=1.8e-09 Score=105.09 Aligned_cols=237 Identities=17% Similarity=0.103 Sum_probs=149.1
Q ss_pred HHHHHHHHHhCCCC-------CcEEEeCCHHHHHHHHHHHhcC--------CC-----C-eEEEcCCCchhhHHHHHHCC
Q 014492 133 RLRAALAKDSGLES-------DHILVGCGADELIDLIMRCVLD--------PG-----D-KIVDCPPTFTMYEFDAAVNG 191 (423)
Q Consensus 133 ~lr~~ia~~~g~~~-------~~i~~t~G~~~al~~~~~~l~~--------~g-----d-~Vl~~~p~y~~~~~~~~~~g 191 (423)
++.+.+++.+|.+. ..-++|+|+++++..++.+..+ .| . .|++.+-+|......+...|
T Consensus 83 ~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~lG 162 (373)
T PF00282_consen 83 EVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAARILG 162 (373)
T ss_dssp HHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHHHTT
T ss_pred HHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhcceee
Confidence 45556666677761 3567999999998766643311 11 2 46667778999999999999
Q ss_pred CeEEEecCCCCCCCCHHHHHHHhhcC--C---ceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccC-CCc
Q 014492 192 AAVVKVPRKSDFSLNVELIADAVERE--K---PKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSG-LES 264 (423)
Q Consensus 192 ~~~~~v~~~~~~~~d~~~l~~~i~~~--~---~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~-~~~ 264 (423)
+.++.||.++++.+|+++|++++.+. + +-+|+.+-....||.+=++++|.+|++. ++|+.+|.+|..... .+.
T Consensus 163 lg~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~ 242 (373)
T PF00282_consen 163 LGVRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAAYGGSALLSPE 242 (373)
T ss_dssp SEEEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEETTGGGGGGHCT
T ss_pred eEEEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceeeeeccccccccccccc
Confidence 99999999888899999999988531 2 3356667888999999999999999997 999999999987331 111
Q ss_pred hhhhhcc-CCcEEEEccChhhhcccCccccccccCH-HHHHHHHHhcCC-------------------CCCcH-HHHHHH
Q 014492 265 RMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWRAKQP-------------------YNVSV-AAEVAA 322 (423)
Q Consensus 265 ~~~~~~~-~~~~i~i~S~SK~~g~~G~R~G~i~~~~-~~~~~l~~~~~~-------------------~~~~~-~~~~a~ 322 (423)
....... ....=+..+++|.++ ....+|+++... ..+......... ...+. .....+
T Consensus 243 ~~~~~~gi~~adSit~d~HK~l~-~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR~~~alk~ 321 (373)
T PF00282_consen 243 YRHLLFGIERADSITIDPHKWLG-VPYGCGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYGDYTLQGSRRFRALKL 321 (373)
T ss_dssp TGGGGTTGGGESEEEEETTTTTS--SSS-EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEGSSSSSGHHHHHHH
T ss_pred ccccccccccccccccchhhhhc-CCccceeEEeecccchHHHhccChhhhcccccccccccccccccccccccchHHHH
Confidence 1111111 111134457899665 667788888754 333322111000 11222 222333
Q ss_pred HHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEe
Q 014492 323 CAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEV 370 (423)
Q Consensus 323 ~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~ 370 (423)
...++. .+.+.+..++..++.+++.+.|++.+.+.+ .+..-+.+.+++
T Consensus 322 w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~~~~vcFr~ 372 (373)
T PF00282_consen 322 WATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEPDLNIVCFRY 372 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTSSSEEEEEE
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCceEEEEEe
Confidence 333432 355778888888999999999999886664 355556665554
No 373
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.13 E-value=2.9e-09 Score=102.70 Aligned_cols=275 Identities=19% Similarity=0.202 Sum_probs=161.1
Q ss_pred CCCCCeeEcCCC--CCCCC-CCHHHHHHHhcC----CCC--CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492 92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQL----KFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (423)
Q Consensus 92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~~----~~~--~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~ 162 (423)
.+++.++|+..+ ...++ .+|++.+++.+. .+. ..+..+...+|-+.+.+.++-..+.++++++++++++.+
T Consensus 13 ~dG~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~A 92 (339)
T PF00202_consen 13 VDGREYLDFMSGYGSVNLGHNHPEIAEAIAEQANKLNYVSFSGFTHPEAAELAEKLAELFPGGLDRVFFANSGSEAVEAA 92 (339)
T ss_dssp TTSEEEEESSHHHHTTTT-BT-HHHHHHHHHHHHHCSSCSTTTSEEHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHHH
T ss_pred CCCCEEEECCCCccceecCCCccccchhHHHHhhhcccccccceeccchhhhhhhhhhccccccceeeeccCchHHHHHH
Confidence 356678999755 34454 358888888762 211 122223345788888888854557999999999999999
Q ss_pred HHHhc-------C-CCCeEEEcCCCchhhHHHHHH-C------------CCeEEEecCCCCCC-----CCHHHHH---HH
Q 014492 163 MRCVL-------D-PGDKIVDCPPTFTMYEFDAAV-N------------GAAVVKVPRKSDFS-----LNVELIA---DA 213 (423)
Q Consensus 163 ~~~l~-------~-~gd~Vl~~~p~y~~~~~~~~~-~------------g~~~~~v~~~~~~~-----~d~~~l~---~~ 213 (423)
++... . ...+|+....+|+.....+.. . ...+..+|.++... -..+.++ ..
T Consensus 93 lkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 172 (339)
T PF00202_consen 93 LKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAA 172 (339)
T ss_dssp HHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHHHHHHHHHHh
Confidence 98654 1 237899888888743322211 1 12345555322100 0011122 22
Q ss_pred hhcCCceEEEEcCCCCCcCcCCC-HHH---HHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEEEccChhhhc
Q 014492 214 VEREKPKCIFLTSPNNPDGSIIN-DED---LLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAG 286 (423)
Q Consensus 214 i~~~~~~~i~l~~p~NPtG~~~~-~~~---l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~g 286 (423)
...+++.+|++...+...|...+ .+- +.++|+. |+++|.||++..|...+.. ....+..+.+++ ++|.++
T Consensus 173 ~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv~PDiv~---~gK~l~ 249 (339)
T PF00202_consen 173 LNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFASEHYGVDPDIVT---FGKGLG 249 (339)
T ss_dssp HHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHHTSSSSEEE---EEGGGG
T ss_pred hcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCccceecccccCcccc---cccchh
Confidence 33357788888866666676554 433 4455555 9999999999988543322 222333344443 469998
Q ss_pred ccCccccccccCHHHHHHHHHh--cCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHc-cCCCCeecC
Q 014492 287 LAGLRVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLK-DVPFLNPYP 360 (423)
Q Consensus 287 ~~G~R~G~i~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~~~p 360 (423)
.|+.+|.+++++++.+.+... ...|..++++..++.+.|+. ++..+...+.-...++.|. .|. +.+.+.-..
T Consensus 250 -gG~p~sav~~~~~i~~~~~~~~~~~T~~g~p~~~aaa~~~l~~~~~~~~~~~~~~~g~~l~~~L~-~l~~~~~~i~~vr 327 (339)
T PF00202_consen 250 -GGLPISAVLGSEEIMEAFQPGSHGSTFGGNPLSCAAALATLEILEEEDLLERVRELGERLREGLR-ELAARYPLIGEVR 327 (339)
T ss_dssp -TTSSEEEEEEEHHHHTTSCTTSSTCTTTT-HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH-HHHHHTTTEEEEE
T ss_pred -hhhhcccccccchhhccccccccccccccchHhhhhhhhHHHhhccHHHHHHHHHHHHHHHHHHH-HHHHhCCCeEEEe
Confidence 779999999999988866432 24467788888888877764 2233333333333333333 222 235444445
Q ss_pred CCceEEEEEeC
Q 014492 361 SYSNFILCEVT 371 (423)
Q Consensus 361 ~~~~~~~~~~~ 371 (423)
..|.++.+++.
T Consensus 328 g~Gl~~~ie~~ 338 (339)
T PF00202_consen 328 GIGLMIGIELV 338 (339)
T ss_dssp EETTEEEEEES
T ss_pred eeCeEEEEEEE
Confidence 66777777763
No 374
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.13 E-value=1.4e-08 Score=93.85 Aligned_cols=310 Identities=18% Similarity=0.193 Sum_probs=188.2
Q ss_pred eEcCCCCCCCCCCHHHHHHHhcC---CCCCCCCC------cchHHH-----HHHHHHHhCCCCC----cEEEeCCHHHHH
Q 014492 98 VKIDANENPYGPPPEVREALGQL---KFPYIYPD------PESRRL-----RAALAKDSGLESD----HILVGCGADELI 159 (423)
Q Consensus 98 i~l~~~~~~~~~~~~v~~al~~~---~~~~~Y~~------~g~~~l-----r~~ia~~~g~~~~----~i~~t~G~~~al 159 (423)
|.|=..||-. +..|.+|+... .+.-+||. ...-+- ++..-+.|+++|+ +|..-+|+. |.
T Consensus 43 ieLIaSENFt--s~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGSP-AN 119 (477)
T KOG2467|consen 43 IELIASENFT--SRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSGSP-AN 119 (477)
T ss_pred eeEeecccch--HHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCCCc-hh
Confidence 6666666643 46788888752 23334432 222122 2222244677775 777777775 66
Q ss_pred HHHHHHhcCCCCeEEE---cCCCchh--hHHHHHHCCCeEEEe---c--CC-CCCCCCHHHHHHHhhcCCceEEEEcCCC
Q 014492 160 DLIMRCVLDPGDKIVD---CPPTFTM--YEFDAAVNGAAVVKV---P--RK-SDFSLNVELIADAVEREKPKCIFLTSPN 228 (423)
Q Consensus 160 ~~~~~~l~~~gd~Vl~---~~p~y~~--~~~~~~~~g~~~~~v---~--~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~ 228 (423)
..+..+++.|++.|.- ++-.|-. |....+.-.+.-+.+ | .+ ..+-+|.|.|++....-+||+|+.-.-.
T Consensus 120 favYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~frPk~iiaG~Sa 199 (477)
T KOG2467|consen 120 FAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTGYIDYDKLEKTATLFRPKLIIAGTSA 199 (477)
T ss_pred hHHHhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCCceehHHHHHHHHhcCCcEEEecccc
Confidence 6788889999999873 3444422 221112111222222 1 22 4567899999998777899988853322
Q ss_pred CCcCcCCCHHHHHHHHcC-CCEEEEccCCcccc-CC---CchhhhhccCCcEEEEccChhhhcccCccccccccCHHH--
Q 014492 229 NPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GL---ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI-- 301 (423)
Q Consensus 229 NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~-~~---~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~-- 301 (423)
--+.++-.++++||+. |.+++.|-+|.... .. +++...+ .|+..|.+|+ +.|-|-|.|...+.+
T Consensus 200 --Y~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey~-----DiVTTTTHKs--LRGPRg~mIFyRkGvk~ 270 (477)
T KOG2467|consen 200 --YSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEYC-----DIVTTTTHKS--LRGPRGAMIFYRKGVKS 270 (477)
T ss_pred --chhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCccccc-----ceeecccccc--ccCCcceeEEEeccCCc
Confidence 3467888999999998 99999999996432 21 2233222 3778888996 479899988864321
Q ss_pred -------------HHHHHHhcCC---CCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCC
Q 014492 302 -------------IEYLWRAKQP---YNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSY 362 (423)
Q Consensus 302 -------------~~~l~~~~~~---~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~ 362 (423)
-+++.....+ .++......++..+|.+ ++ +.+..+++..|.+.|.+.|.+.+.--+..+.
T Consensus 271 ~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpe-fk~Yq~qV~~Nakala~~l~~~Gy~lvtgGT 349 (477)
T KOG2467|consen 271 IKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPE-FKEYQKQVLKNAKALASALISRGYKLVTGGT 349 (477)
T ss_pred CCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhCCHH-HHHHHHHHHHHHHHHHHHHHHcCceEecCCc
Confidence 1222221112 23444445555556654 34 5677888889999999999988765454444
Q ss_pred ce-EEEEEeC-CCCCHHHHHHHHHhCCcEEE----eCCC-CCCCCeEEEEec-------ChhhHHHHHHHHh
Q 014492 363 SN-FILCEVT-SGMDAKKLKDDLAKMGVMIR----HYNN-KELKGYVRVSVG-------KPEHTDALMECLM 420 (423)
Q Consensus 363 ~~-~~~~~~~-~~~~~~~l~~~L~~~gI~v~----~~~~-~~~~~~iRis~~-------~~~~~~~l~~al~ 420 (423)
.+ .+++++. .|.|...+-..|..-+|.+. ||+. .-.++.|||... .++|.+++.+.|.
T Consensus 350 DnHlvLvDLr~~G~dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi~ 421 (477)
T KOG2467|consen 350 DNHLVLVDLRPKGVDGARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMTSRGFGEEDFEKVADFID 421 (477)
T ss_pred cceEEEEeccccCCchHHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchhhcccCccHHHHHHHHHHHH
Confidence 44 4567774 47776666555555677664 4443 345789999742 3555666665554
No 375
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=98.97 E-value=1.6e-07 Score=89.00 Aligned_cols=282 Identities=16% Similarity=0.163 Sum_probs=165.1
Q ss_pred HHHHHHHHHhCCCCCcEEEeCCHHHHHH--HHHHHh-cCCC----CeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCC
Q 014492 133 RLRAALAKDSGLESDHILVGCGADELID--LIMRCV-LDPG----DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSL 205 (423)
Q Consensus 133 ~lr~~ia~~~g~~~~~i~~t~G~~~al~--~~~~~l-~~~g----d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~ 205 (423)
+|++.+++..|.+.=.+..-+|++.=+. ++++.. -..| +.+|+++..|......+.+.|.+|+.|+.++++.+
T Consensus 113 ~Lq~~L~~ITG~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G~~VV~V~~~~~G~V 192 (496)
T COG1003 113 ELQEWLKEITGMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAAMAGFKVVVVKCDENGNV 192 (496)
T ss_pred HHHHHHHHhcCCceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChhhHhhcCceEEEEecCCCCCc
Confidence 4444444555765444445556554332 223333 2223 67999999999888888899999999999888999
Q ss_pred CHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCchhhhhccCCcEEEEccC
Q 014492 206 NVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF 281 (423)
Q Consensus 206 d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~ 281 (423)
|+++|++++. +++.++.|++||. .|.. .+.|.+||+. |..|..|.+-..-..+-.. .++.+..|+=--+
T Consensus 193 DlddLk~k~~-~~~AalMiTnPsT-~GvF--E~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~r---PGd~G~DV~HlNL 265 (496)
T COG1003 193 DLDDLRAKAE-DNLAALMITNPST-LGVF--EEDIREICEIVHEAGGQVYYDGANLNAIVGLAR---PGDMGFDVVHLNL 265 (496)
T ss_pred cHHHHHHHhc-cceeEEEeccCcc-cccc--hhhHHHHHHHHHHcCCEEEecCcchhhhhcccc---ccccccceEEeec
Confidence 9999999997 7999999999986 5654 4556666654 9999999986532211110 1122223444457
Q ss_pred hhhhccc----CccccccccCHHHHHHHHH----------------------hcCCCCCcHHHHHHHHHHhC--ChHHHH
Q 014492 282 SKRAGLA----GLRVGYGAFPLSIIEYLWR----------------------AKQPYNVSVAAEVAACAALQ--NPIYLE 333 (423)
Q Consensus 282 SK~~g~~----G~R~G~i~~~~~~~~~l~~----------------------~~~~~~~~~~~~~a~~~~l~--~~~~~~ 333 (423)
+|.|+.| |-..|=+.....+...+-. ...+|+--.+ ...+..++. ..+.++
T Consensus 266 HKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~i-l~~a~~YI~~mG~~GL~ 344 (496)
T COG1003 266 HKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSASI-LPIAWAYIRMMGADGLK 344 (496)
T ss_pred ccccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCCccceeeccccCcchH-HHHHHHHHHHHhHHHHH
Confidence 8887654 3334544443333322211 0111211111 222222222 245566
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCeecCCC--ceEEEEEeC-----CCCCHHHHHHHHHhCCcEEEeCCCC-CCCCeEEEE
Q 014492 334 KVKEALIKERERLFKLLKDVPFLNPYPSY--SNFILCEVT-----SGMDAKKLKDDLAKMGVMIRHYNNK-ELKGYVRVS 405 (423)
Q Consensus 334 ~~~~~~~~~~~~l~~~L~~~~~~~~~p~~--~~~~~~~~~-----~~~~~~~l~~~L~~~gI~v~~~~~~-~~~~~iRis 405 (423)
+.-+.---+.+++.+.|+..=-+...+.. ..=+.++.. .|++..+++++|.++|+.-.....+ -..+.+=|=
T Consensus 345 ~ase~AvLNANYia~rL~~~y~~~y~~~~~~~HE~ild~r~l~~~~Gv~~~DvAKrLlD~GfHaPT~~FPliV~~tLMIE 424 (496)
T COG1003 345 QASEVAVLNANYIARRLKGYYPVPYTGENRVAHECILDARPLKKETGVRALDVAKRLLDYGFHAPTMYFPLIVAGTLMIE 424 (496)
T ss_pred HHHHHHHHhHHHHHHHhhhcCccccCCCCcceeEEEeechHhHhhcCCcHHHHHHHHHhcCCCCCcccCccccccceeec
Confidence 66666667889999999863111111221 111222222 2789999999999999766544432 246777776
Q ss_pred ecC---hhhHHHHHHHHhhh
Q 014492 406 VGK---PEHTDALMECLMHL 422 (423)
Q Consensus 406 ~~~---~~~~~~l~~al~~l 422 (423)
.+. .++.|++.+++..|
T Consensus 425 PTEsEsk~eLDrf~dami~I 444 (496)
T COG1003 425 PTESESKEELDRFIDAMIAI 444 (496)
T ss_pred CCCCCCHHHHHHHHHHHHHH
Confidence 664 34455566655544
No 376
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=98.95 E-value=2.9e-09 Score=89.68 Aligned_cols=85 Identities=25% Similarity=0.504 Sum_probs=65.6
Q ss_pred CCCeeEcCCCCCC-----------------CCCCHHHHHHHhcCCCCCCCCC-cchHHHHHHHHHHh----C----CCCC
Q 014492 94 PEDIVKIDANENP-----------------YGPPPEVREALGQLKFPYIYPD-PESRRLRAALAKDS----G----LESD 147 (423)
Q Consensus 94 ~~~~i~l~~~~~~-----------------~~~~~~v~~al~~~~~~~~Y~~-~g~~~lr~~ia~~~----g----~~~~ 147 (423)
+..+|+|+.+||. +.+++.+.+++.+. ..|++ .|..+||+++++|+ | ++++
T Consensus 42 p~G~I~lg~aEN~l~~dli~~~i~~~p~~d~~~~~~i~~~~~~~---a~Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~pd 118 (153)
T PLN02994 42 PQGIIQMGLAENQLCSDLIEEWIEENPHADICTAEGTIDSFKDI---ALFQDYHGLANFRKAIANFMAEARGGRVKFDAD 118 (153)
T ss_pred CCceEeeehhhhHhHHHHHHHHHhCCCccccCCcHHHHHHHHHH---hcCCCCCCcHHHHHHHHHHHHHHhCCCCccchh
Confidence 4456777777663 33334445555442 23644 47899999999986 4 4688
Q ss_pred cEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCch
Q 014492 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT 181 (423)
Q Consensus 148 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~ 181 (423)
+|++|+|+++++..++.++++|||.|++++|+|+
T Consensus 119 ~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~ 152 (153)
T PLN02994 119 MIVLSAGATAANEIIMFCIADPGDAFLVPTPYYA 152 (153)
T ss_pred heEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 9999999999999999999999999999999996
No 377
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=98.95 E-value=4.8e-08 Score=94.96 Aligned_cols=267 Identities=16% Similarity=0.164 Sum_probs=146.7
Q ss_pred HHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh---cCCCCeEEEcCCCchhhHHHHH----HCCCeEEEecCCCCCCC
Q 014492 133 RLRAALAKDSGLESDHILVGCGADELIDLIMRCV---LDPGDKIVDCPPTFTMYEFDAA----VNGAAVVKVPRKSDFSL 205 (423)
Q Consensus 133 ~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l---~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~v~~~~~~~~ 205 (423)
++...+++..|.+.-+.-+-.|++.+-+.++.+. -+.+++|+++.-.|+.+....+ ..|.+++.++.+++...
T Consensus 114 e~Qs~i~eLTGmdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~~~~ 193 (429)
T PF02347_consen 114 EYQSMICELTGMDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDEDGTT 193 (429)
T ss_dssp HHHHHHHHHHTSSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTTCSB
T ss_pred HHHHHHHHhhCCCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecccccCCc
Confidence 7889999999987655566667766655554433 2334689999999987776443 47999999997665555
Q ss_pred CHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhh
Q 014492 206 NVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKR 284 (423)
Q Consensus 206 d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~ 284 (423)
| .+++.+|++.+||. .|.+-+.+++.++++. |.++++ .+.- ..- ..+......+.+|++++ +|.
T Consensus 194 d---------~~~~a~v~vq~Pn~-~G~~ed~~~i~~~~h~~gal~~~-~ad~-~aL--~~l~~Pge~GADI~vg~-~Q~ 258 (429)
T PF02347_consen 194 D---------DDDTAAVMVQNPNT-FGVFEDIKEIADIAHAAGALVIV-GADP-NAL--GGLKSPGEYGADIVVGE-HQT 258 (429)
T ss_dssp ----------STTEEEEEEESS-T-TSB--THHHHHHHHHHTT-EEEE-CGGC-CGC--CTC--GGGGT-SEEEEC-CTT
T ss_pred c---------ccCeEEEEeecCCC-CceEeeHHHHHHHHHHcCCEEEE-ecCH-HHH--hCcCChhhcCccEEeeC-CCC
Confidence 5 47899999999997 8999999999999986 887776 3321 111 11122223444567776 677
Q ss_pred hccc----CccccccccCHHHHHHHH----------------------------HhcCCC--CCc-HH-HHH-HHHHHhC
Q 014492 285 AGLA----GLRVGYGAFPLSIIEYLW----------------------------RAKQPY--NVS-VA-AEV-AACAALQ 327 (423)
Q Consensus 285 ~g~~----G~R~G~i~~~~~~~~~l~----------------------------~~~~~~--~~~-~~-~~~-a~~~~l~ 327 (423)
||.| |--.|++.+.+++++.+- +-+... +.+ .+ +.. +++.++.
T Consensus 259 fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~ 338 (429)
T PF02347_consen 259 FGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQALLALAAAIYLAYL 338 (429)
T ss_dssp TT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHH
T ss_pred CcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhHHHHHHHHHHHHHHh
Confidence 7654 455788887777665432 212121 112 22 222 2223333
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceE--EEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEE
Q 014492 328 NPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNF--ILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVS 405 (423)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~--~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis 405 (423)
.++.+++..++...+..++.+.|+++. ........+| +....+ .....++.++....|+.... ...+++-|+
T Consensus 339 G~~GL~~iA~~~~~~A~yl~~~L~~~~-~~~~~~~~f~e~v~~~~~-~~~~~~l~~~~~~~gl~~~~----~~~~~~li~ 412 (429)
T PF02347_consen 339 GPEGLREIAERIHLNAHYLAERLKKIY-GLPFDNPFFFEFVVVFSK-DKEVEELLKRGIEGGLNLRY----PDDGALLIC 412 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCTT-BECSSSSSBSSEEEEESS--HHHHHHHHTT----EEEGG----G-SSEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhc-CcccCCCCceeeeeecCC-cHHHHHHHHHHHhcCCCccc----cCCCeEEEE
Confidence 467899999999999999999999972 2223333333 333332 21222334444445533322 224588888
Q ss_pred ecChhhHHHHHHHHh
Q 014492 406 VGKPEHTDALMECLM 420 (423)
Q Consensus 406 ~~~~~~~~~l~~al~ 420 (423)
++...+.++++..++
T Consensus 413 ~TE~~t~edid~lv~ 427 (429)
T PF02347_consen 413 VTETRTKEDIDRLVE 427 (429)
T ss_dssp --TT--HHHHHHHHH
T ss_pred ccCCCCHHHHHHHHh
Confidence 875444455555544
No 378
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.92 E-value=2.1e-07 Score=88.56 Aligned_cols=212 Identities=18% Similarity=0.112 Sum_probs=144.1
Q ss_pred CHHHHHHHhcC-CC---CCCCCCcc--hHHHHHHHHHHhCCC-CCcEEEeCCHHHHHHHHHHHhcCCCCeEE-----EcC
Q 014492 110 PPEVREALGQL-KF---PYIYPDPE--SRRLRAALAKDSGLE-SDHILVGCGADELIDLIMRCVLDPGDKIV-----DCP 177 (423)
Q Consensus 110 ~~~v~~al~~~-~~---~~~Y~~~g--~~~lr~~ia~~~g~~-~~~i~~t~G~~~al~~~~~~l~~~gd~Vl-----~~~ 177 (423)
.+++++++... .. ...|-..+ ..++......+.++. .+.++++|..+.++..++.++.+++..|+ ++
T Consensus 40 ~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~~~~~~~~~aea~~ivnnn~aAVll~~~al~~~~EvVis~g~lV~- 118 (395)
T COG1921 40 SPEAIEAMKEAMRAPVELETDLKTGKRGARLTELAELLCGLTGAEAAAIVNNNAAAVLLTLNALAEGKEVVVSRGELVE- 118 (395)
T ss_pred CHHHHHHHHHHhcccceeeeecccchhhHHHHHHHHHHhcccchhheeeECCcHHHHHHHHhhhccCCeEEEEcccccc-
Confidence 47777777652 11 11222222 234554444445653 57889999999999999998887555554 23
Q ss_pred CCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEc-CCCCCcCcCCCHHHHHHHHcC-CCEEEEccC
Q 014492 178 PTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNNPDGSIINDEDLLKILEM-PILVVLDEA 255 (423)
Q Consensus 178 p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~-~p~NPtG~~~~~~~l~~i~~~-~~~li~Dea 255 (423)
+..+......+..|++++.+-.. ..-...+++.+|. +++++++=. ++|-+-=-.++.+++.+|++. |+++++|.+
T Consensus 119 gg~~~v~d~~~~aG~~l~EvG~t--n~t~~~d~~~AIn-e~ta~llkV~s~~~~f~~~l~~~~l~~ia~~~~lpvivD~a 195 (395)
T COG1921 119 GGAFRVPDIIRLAGAKLVEVGTT--NRTHLKDYELAIN-ENTALLLKVHSSNYGFTGMLSEEELVEIAHEKGLPVIVDLA 195 (395)
T ss_pred CCCCChhHHHHHcCCEEEEeccc--CcCCHHHHHHHhc-cCCeeEEEEeeccccccccccHHHHHHHHHHcCCCEEEecC
Confidence 56678899999999999999842 2467899999997 677766654 444333345788999999997 999999998
Q ss_pred CccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhc--CCCCCcHHHHHHHHHHhC
Q 014492 256 YTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQ 327 (423)
Q Consensus 256 y~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~--~~~~~~~~~~~a~~~~l~ 327 (423)
-.............-..+..+++.|..|.+| |.+.|.+++.+++++++.+.. +.+.+.....++..++|+
T Consensus 196 Sg~~v~~e~~l~~~la~GaDLV~~SgdKllg--GPqaGii~GkKelI~~lq~~~l~Ralrv~K~tla~l~~aLe 267 (395)
T COG1921 196 SGALVDKEPDLREALALGADLVSFSGDKLLG--GPQAGIIVGKKELIEKLQSHPLKRALRVDKETLAALEAALE 267 (395)
T ss_pred CccccccccchhHHHhcCCCEEEEecchhcC--CCccceEechHHHHHHHHhhhhhhhhhcCcHhHHHHHHHHH
Confidence 7655432222222223455688899999765 888999999999999887653 334555555555555554
No 379
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=98.91 E-value=5.1e-08 Score=87.87 Aligned_cols=323 Identities=15% Similarity=0.124 Sum_probs=183.2
Q ss_pred CCCCCCeeEcCCCCCCC-CCCHHHHHHHhc-CC---CCCCCCCcchHHHHHHHHHHhCC--CCCcEEEeCCHHHHHHHHH
Q 014492 91 GRKPEDIVKIDANENPY-GPPPEVREALGQ-LK---FPYIYPDPESRRLRAALAKDSGL--ESDHILVGCGADELIDLIM 163 (423)
Q Consensus 91 ~~~~~~~i~l~~~~~~~-~~~~~v~~al~~-~~---~~~~Y~~~g~~~lr~~ia~~~g~--~~~~i~~t~G~~~al~~~~ 163 (423)
+.++..++|.-+|.... ..+|+|.+|... +. ...++-. .+|.+-....... +-+-++++|+++|+.++++
T Consensus 43 DE~g~~yLDCInNVaHvghchp~VV~A~~kQmat~~tN~RFlh---d~lv~cA~~l~stlPeLsvc~F~NSGSEANDLAL 119 (452)
T KOG1403|consen 43 DEEGTRYLDCINNVAHVGHCHPEVVRAGAKQMATISTNNRFLH---DELVQCARTLTSTLPELSVCFFVNSGSEANDLAL 119 (452)
T ss_pred ccCcccHHHHhhhhhhcccCCHHHHHHHHHHHhHhcccchhhH---HHHHHHHHHHhhcCCCceEEEEecCCchhhHHHH
Confidence 34455666665554444 357888877654 32 2233321 2233322222221 1357889999999999998
Q ss_pred HHh---cCCCCeEEEcCCCchhhHHH-H-----HH-CCC-----eEEEe-cCCCCC------------C---CCHHHHHH
Q 014492 164 RCV---LDPGDKIVDCPPTFTMYEFD-A-----AV-NGA-----AVVKV-PRKSDF------------S---LNVELIAD 212 (423)
Q Consensus 164 ~~l---~~~gd~Vl~~~p~y~~~~~~-~-----~~-~g~-----~~~~v-~~~~~~------------~---~d~~~l~~ 212 (423)
+.. .+..| ||+.+..|...... . +. .|. ..+.| |.++-+ . .-.+.+++
T Consensus 120 RLAR~ftkhqD-vItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~ 198 (452)
T KOG1403|consen 120 RLARNFTKHQD-VITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKE 198 (452)
T ss_pred HHHHhhcccCc-eEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhhhhHHHH
Confidence 843 33445 55556666432211 0 11 111 12222 211100 0 11233444
Q ss_pred Hhhc-----CCceEEEEcCCCCCcCcCCCHH-HHHHHHcC----CCEEEEccCCccccCCCchhhhhccCCcEEEEccCh
Q 014492 213 AVER-----EKPKCIFLTSPNNPDGSIINDE-DLLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFS 282 (423)
Q Consensus 213 ~i~~-----~~~~~i~l~~p~NPtG~~~~~~-~l~~i~~~----~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~S 282 (423)
.+.+ .++.+.+-.+-++--|.++|+. -.+++++. |.+.|.||++..|..-++.......++-+--+-++.
T Consensus 199 I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPDIVtmg 278 (452)
T KOG1403|consen 199 ICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQTYNFIPDIVTMG 278 (452)
T ss_pred HHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchhhhhhhhhccccchheec
Confidence 4432 2344555567788888888765 46677664 889999999999987666665555555444566788
Q ss_pred hhhcccCccccccccCHHHHHHHHHhc----CCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccC----C
Q 014492 283 KRAGLAGLRVGYGAFPLSIIEYLWRAK----QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDV----P 354 (423)
Q Consensus 283 K~~g~~G~R~G~i~~~~~~~~~l~~~~----~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~----~ 354 (423)
|.+| .|..++.++..+++.+.+.... ..|+.|+.+.++..+.++.-+ -+.++.+-++.-++|...|+++ .
T Consensus 279 KpmG-NGhPVa~VattkeIA~Af~atgv~YFNTyGGnPVsCAv~laVm~v~e-~E~Lq~ha~~vG~~L~~lL~~~k~kh~ 356 (452)
T KOG1403|consen 279 KPMG-NGHPVAAVATTKEIAQAFHATGVEYFNTYGGNPVSCAVGLAVMRVCE-DENLQEHAQQVGEKLEVLLRRLKQKHE 356 (452)
T ss_pred ccCC-CCCeeeEEeccHHHHHHhccccceehhccCCCchhHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 9998 9999999999999999887533 236778888888877776311 1233333334444444444432 2
Q ss_pred CCeecCCCceEEEEEeCC--------CCCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 355 FLNPYPSYSNFILCEVTS--------GMDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 355 ~~~~~p~~~~~~~~~~~~--------~~~~~~l~~~L~-~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
.+--..+.|.|+-+++-+ ...+..+..+|+ .++|++..-++ ..+-+.|-.. .+++.+++..++++
T Consensus 357 ~IGDvRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaDGP--h~NilKiKPPmCFneena~e~v~~ld~ 433 (452)
T KOG1403|consen 357 CIGDVRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSADGP--HRNILKIKPPMCFNEENADEFVLGLDE 433 (452)
T ss_pred ceeccccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecCCC--CCceeecCCCcccChhhHHHHHHHHHH
Confidence 121235678898888742 223455667777 57899876442 2345555421 23334555555544
No 380
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.85 E-value=6.7e-06 Score=78.26 Aligned_cols=301 Identities=17% Similarity=0.146 Sum_probs=185.1
Q ss_pred cCCCCCCCCCCHHHHHHHhcC-CCCCCC-C---Cc--c----hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh--
Q 014492 100 IDANENPYGPPPEVREALGQL-KFPYIY-P---DP--E----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-- 166 (423)
Q Consensus 100 l~~~~~~~~~~~~v~~al~~~-~~~~~Y-~---~~--g----~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l-- 166 (423)
++.|..+.-.|+.|.+.+.+- .....| | .- | .-++...++++.|.+-.|--+--+++.+-+.++.+.
T Consensus 80 iG~GyY~~~~P~vI~rnile~pewyTaYTPYQpEISQGrLqaLfefQtlv~dLTGm~VANASm~DeaTAaAEAm~ma~r~ 159 (450)
T COG0403 80 IGAGYYDTYTPPVILRNILENPEWYTAYTPYQPEISQGRLEALFEFQTLVADLTGLDVANASMLDEATAAAEAMLMAKRV 159 (450)
T ss_pred ccCcccCCcCcHHHHHHhhcCccccccCCCCchhhhhHHHHHHHHHHHHHHHHhCCCcccchhhhhHHHHHHHHHHHHHh
Confidence 345555555566666455542 222334 2 11 2 226778888898987666666666665555554443
Q ss_pred -cCCCCeEEEcCCCchhhHHHHHH----CCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcC-cCCCHHHH
Q 014492 167 -LDPGDKIVDCPPTFTMYEFDAAV----NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDG-SIINDEDL 240 (423)
Q Consensus 167 -~~~gd~Vl~~~p~y~~~~~~~~~----~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG-~~~~~~~l 240 (423)
-.+..+++++.-+|+.+....+- .|.+++.++.+ |++++++. ...++-++++.+|+. .| ...+..++
T Consensus 160 ~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-----d~~~l~~~-~~~~~~gv~vQyP~~-~G~~~~d~~~l 232 (450)
T COG0403 160 TKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-----DLDDLESA-DDGDVFGVLVQYPNT-FGIVEEDLRAL 232 (450)
T ss_pred hcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-----hhhhhhhc-cccCeEEEEEecCCC-CCccchhHHHH
Confidence 22357899999999877766554 57788887753 77888888 546889999999985 77 55568888
Q ss_pred HHHHcC-CCEEEE--ccCCccccCCCchhhhhccCCcEEEEccChhhhccc----CccccccccCHHHHHHH--------
Q 014492 241 LKILEM-PILVVL--DEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLA----GLRVGYGAFPLSIIEYL-------- 305 (423)
Q Consensus 241 ~~i~~~-~~~li~--Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~----G~R~G~i~~~~~~~~~l-------- 305 (423)
.++++. +.++++ |-.-. ..+......+.+|++++..- ||+| |--+||..+.+++.+++
T Consensus 233 ~~~~h~~~al~~v~aDplaL------~LL~pPGe~GADIvvG~~Qr-fGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S 305 (450)
T COG0403 233 IEAAHSAGALVIVAADPLAL------GLLKPPGEFGADIVVGSAQR-FGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVS 305 (450)
T ss_pred HHHHhhcCCEEEEEechhHh------hccCCccccCCceEEecCcc-cCCCcCCCCcceeeeeEhHhHhhcCCCceeeee
Confidence 888886 665553 21111 11222234566788888765 4543 56678888777776532
Q ss_pred --------------------HHhcCCCCCcH----HH-HHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC-CCeec
Q 014492 306 --------------------WRAKQPYNVSV----AA-EVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP-FLNPY 359 (423)
Q Consensus 306 --------------------~~~~~~~~~~~----~~-~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~ 359 (423)
++-+...++-+ .+ .+++...+..++.+.++..+..+...++.+.|++++ ++.+.
T Consensus 306 ~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~ 385 (450)
T COG0403 306 VDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELV 385 (450)
T ss_pred ecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEec
Confidence 12222222211 11 222233344467899999999999999999999765 23444
Q ss_pred CCCceE--EEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014492 360 PSYSNF--ILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM 420 (423)
Q Consensus 360 p~~~~~--~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~ 420 (423)
.+ .+| +.++++. .....+.++....|+.++... .+.+=|++. +.++++.|.+++.
T Consensus 386 ~~-~fFdt~~v~~~~-~~~~~l~~~~~~~G~~L~~~~----~~~~~ia~tEt~t~~~i~~l~~~~~ 445 (450)
T COG0403 386 FD-HFFDTFTVRVPE-EVAEALLAAAIAGGINLRRVD----ADTVLIALTETTTKEDIDALVAAFG 445 (450)
T ss_pred cc-cceeeEEEecch-hHHHHHHHHHHhcCCceeeec----CCceEEEeecccCHHHHHHHHHHHh
Confidence 33 555 4456642 345566666667888888765 235666664 4555666666554
No 381
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=98.85 E-value=9e-07 Score=90.62 Aligned_cols=197 Identities=16% Similarity=0.148 Sum_probs=125.7
Q ss_pred eEEEcCCCchhhHHHHHHCCC---eEEEecCCCCCCCCHHHHHHHhhc---C--CceEEEEcCCCCCcCcCCCHHHHHHH
Q 014492 172 KIVDCPPTFTMYEFDAAVNGA---AVVKVPRKSDFSLNVELIADAVER---E--KPKCIFLTSPNNPDGSIINDEDLLKI 243 (423)
Q Consensus 172 ~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~d~~~l~~~i~~---~--~~~~i~l~~p~NPtG~~~~~~~l~~i 243 (423)
.++++.-.|.++...+...|+ .++.||.++++.+|+++|++.+.+ . .+-+|+.+-....+|.+=|+++|.+|
T Consensus 224 ~vl~s~~aHyS~~KAa~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l 303 (608)
T TIGR03811 224 KWLVPQTKHYSWLKAADIIGIGLDQVIPVPVDSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVAL 303 (608)
T ss_pred EEEECCCccHHHHHHHHHcCCCcccEEEeecCCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHH
Confidence 477777789999999999998 589999988899999999998853 2 23456667888999999999999999
Q ss_pred Hc---C-CC--EEEEccCCcccc---CCC------------------------------chhhhhc-cCCcEEEEccChh
Q 014492 244 LE---M-PI--LVVLDEAYTEFS---GLE------------------------------SRMEWVK-KHDNLIVLRTFSK 283 (423)
Q Consensus 244 ~~---~-~~--~li~Deay~~~~---~~~------------------------------~~~~~~~-~~~~~i~i~S~SK 283 (423)
++ . |+ ++.+|.||+.+. ... .....+. .....=+.-.++|
T Consensus 304 ~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK 383 (608)
T TIGR03811 304 RNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHK 383 (608)
T ss_pred HHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCccc
Confidence 84 2 65 799999999753 100 0000111 1122334557899
Q ss_pred hhcccCccccccccCH-HHHHHHHHhcCCC-----------------CCcHHH--HHHHHHHhC----ChHHHHHHHHHH
Q 014492 284 RAGLAGLRVGYGAFPL-SIIEYLWRAKQPY-----------------NVSVAA--EVAACAALQ----NPIYLEKVKEAL 339 (423)
Q Consensus 284 ~~g~~G~R~G~i~~~~-~~~~~l~~~~~~~-----------------~~~~~~--~~a~~~~l~----~~~~~~~~~~~~ 339 (423)
. |.....+|.++... .+.+.+. ...+| ..+.+. ..++...++ ..+.+.++.++.
T Consensus 384 ~-g~~Py~~G~ll~Rd~~~~~~~~-~~a~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~ 461 (608)
T TIGR03811 384 M-GYIPYSAGGIVIQDIRMRDVIS-YFATYVFEKGADIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGAS 461 (608)
T ss_pred c-cccCCCeEEEEEeCHHHHHHHh-cCcchhccccccCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 5 45677788777754 4333221 11110 112121 222223322 234577788888
Q ss_pred HHHHHHHHHHHccCC------CCe---ecCCCceEEEEEe
Q 014492 340 IKERERLFKLLKDVP------FLN---PYPSYSNFILCEV 370 (423)
Q Consensus 340 ~~~~~~l~~~L~~~~------~~~---~~p~~~~~~~~~~ 370 (423)
.+.++++.+.|.+.+ .+. +.++.-+.+.+++
T Consensus 462 i~~A~~~~~~L~~~~~~~~~~~~el~~~~~pdlniV~Fr~ 501 (608)
T TIGR03811 462 IEGAHRFYDFLNNLEFKVGDKEIEVHPLTKPDFNMVDYVF 501 (608)
T ss_pred HHHHHHHHHHHHhcccccCCCCeeEEecCCCCcceEEEEE
Confidence 888999999887742 122 2345556565554
No 382
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=98.73 E-value=3.6e-06 Score=80.74 Aligned_cols=259 Identities=18% Similarity=0.160 Sum_probs=166.8
Q ss_pred HHHHHHHHHhCCCCC-cEEEeCCHHHHHHHHHHHh---c-C-CC---CeEEEcCCCchhhHHHHHHCCCeEEEecCC-CC
Q 014492 133 RLRAALAKDSGLESD-HILVGCGADELIDLIMRCV---L-D-PG---DKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SD 202 (423)
Q Consensus 133 ~lr~~ia~~~g~~~~-~i~~t~G~~~al~~~~~~l---~-~-~g---d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~ 202 (423)
++-..++.+++-+++ .=..|.|+++++.+..... . . .| ..++.+.-.+..+...++.++.++..||.+ .+
T Consensus 124 ~~Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~l~~V~~~~~~ 203 (491)
T KOG1383|consen 124 ECVNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVELREVPLDEGD 203 (491)
T ss_pred HHHHHHHHHhcCCccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEEEEeeeccccc
Confidence 455556666765444 2246788888854443322 1 1 23 467778888889999999999999999976 67
Q ss_pred CCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC--CCEEEEccCCccccCC--Cchhhhhc-cCCcEE-
Q 014492 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM--PILVVLDEAYTEFSGL--ESRMEWVK-KHDNLI- 276 (423)
Q Consensus 203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~--~~~li~Deay~~~~~~--~~~~~~~~-~~~~~i- 276 (423)
+.+|+.++.+.++ +++.+++..-|+.|+|..=+.+++.++.-. ++.+.+|.+-+.|.-. .......+ ..+.+-
T Consensus 204 ~~~D~~k~~~~i~-eNti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fdFr~p~V~S 282 (491)
T KOG1383|consen 204 YRVDPGKVVRMID-ENTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFDFRVPGVTS 282 (491)
T ss_pred eEecHHHHHHHhc-cceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccccccCccccccCCCCcee
Confidence 8999999999997 789999999999999999999999887654 9999999998877641 11110111 111122
Q ss_pred EEccChhhhcccCccccccccC-HHHHH-HHH-------HhcCCCC-------CcHHHHHHHHHHhCChHHHHHHHHHHH
Q 014492 277 VLRTFSKRAGLAGLRVGYGAFP-LSIIE-YLW-------RAKQPYN-------VSVAAEVAACAALQNPIYLEKVKEALI 340 (423)
Q Consensus 277 ~i~S~SK~~g~~G~R~G~i~~~-~~~~~-~l~-------~~~~~~~-------~~~~~~~a~~~~l~~~~~~~~~~~~~~ 340 (423)
+-.+-+| ||+.--.+||++-. +++.. ++. -....++ ....+|.++.--+..+. ..+..+.+.
T Consensus 283 isa~~HK-YGl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~eG-Y~~~~~~iv 360 (491)
T KOG1383|consen 283 ISADGHK-YGLAPAGSSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGEEG-YRENTQNIV 360 (491)
T ss_pred Eeeccce-eeeeecCcEEEEEcccccccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHhhHHH-HHHHHHHHH
Confidence 2223457 66655557887753 33221 111 0001111 12234444444443344 455556678
Q ss_pred HHHHHHHHHHccCCCCeecC-CCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC
Q 014492 341 KERERLFKLLKDVPFLNPYP-SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN 395 (423)
Q Consensus 341 ~~~~~l~~~L~~~~~~~~~p-~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~ 395 (423)
+....+.+.+++++++.+.. +.-.|+.+.-. ..+--++.+.|.+.|..+.....
T Consensus 361 e~~~~l~egie~i~~i~i~gkp~vs~~~~~s~-~~~i~elsd~l~~~GW~lnalq~ 415 (491)
T KOG1383|consen 361 ETARKLREGIENIKGIKIVGKPLVSFILFGSN-DVNIFELSDLLRKKGWILNALQF 415 (491)
T ss_pred HHHHHHHHhhhccccceecCCCcEEEEEccCC-ccchhhhhHHHHhcCcCccccCC
Confidence 88999999999998887643 33333333322 45667888999999998876654
No 383
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.61 E-value=1.8e-05 Score=73.53 Aligned_cols=289 Identities=17% Similarity=0.180 Sum_probs=176.9
Q ss_pred CC-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCC-----CeEEEcCCCch-hhHHHHHHCCCeEEEe
Q 014492 125 IY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPG-----DKIVDCPPTFT-MYEFDAAVNGAAVVKV 197 (423)
Q Consensus 125 ~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~g-----d~Vl~~~p~y~-~~~~~~~~~g~~~~~v 197 (423)
.| ++.+...|.+++.+.+|. +.++.|.-+..|=++++..++++| .+.++++..|. ......+..|+.++.+
T Consensus 74 AYagsrs~~~L~~avkdifGf--q~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~~ng~~~~n~ 151 (471)
T COG3033 74 AYAGSRSYYALADAVKDIFGF--QYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQINGATPRNV 151 (471)
T ss_pred hhcccccHHHHHHHHHHhcCc--eeeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHHHhcCCccccc
Confidence 46 556788999999999996 677888877777777777666554 44445555554 4445556688888777
Q ss_pred cCCC----------CCCCCHHHHHHHhhc---CCceEEEEc-CCCCCcCcCCCHHHHHHHHc---C-CCEEEEccCCc-c
Q 014492 198 PRKS----------DFSLNVELIADAVER---EKPKCIFLT-SPNNPDGSIINDEDLLKILE---M-PILVVLDEAYT-E 258 (423)
Q Consensus 198 ~~~~----------~~~~d~~~l~~~i~~---~~~~~i~l~-~p~NPtG~~~~~~~l~~i~~---~-~~~li~Deay~-~ 258 (423)
+.++ .+.+|++.|++.|++ +++-.|+++ ..|.-.|+..|.+.+++..+ . ++.++.|.+-. +
T Consensus 152 ~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaE 231 (471)
T COG3033 152 YVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAE 231 (471)
T ss_pred cccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhh
Confidence 7432 246899999999975 346667766 66777889988887776554 4 99999998742 1
Q ss_pred ---cc------CCCchhhhhc----cCCcEEEEccChhhhcccCccccccccCHH----HHHHHHHhcC-------CCCC
Q 014492 259 ---FS------GLESRMEWVK----KHDNLIVLRTFSKRAGLAGLRVGYGAFPLS----IIEYLWRAKQ-------PYNV 314 (423)
Q Consensus 259 ---~~------~~~~~~~~~~----~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~----~~~~l~~~~~-------~~~~ 314 (423)
|. +..-.+..+. .+..-+ .-|.-|. |+..+ -|++....+ +-..++...- ..++
T Consensus 232 NaYFIk~rE~gYrd~sI~~IarEm~sYaD~~-~mS~KKD-~lvnm-GGfl~~~D~~~fDvy~~~~~~~V~~eG~~tYGgl 308 (471)
T COG3033 232 NAYFIKQREPGYRDWSIEEIAREMYSYADGC-TMSAKKD-GLVNM-GGFLCFKDDSFFDVYEECRTLVVVQEGFPTYGGL 308 (471)
T ss_pred hhhhhhhcCcccccccHHHHHHHHHhhhhhh-eeecccc-ceecc-ccEEEecCccHHHHHHHHHhheEeeccccccCcc
Confidence 11 1111111110 122222 2344453 33221 166666543 3344333221 1245
Q ss_pred cHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeC--------CCCCHHHHHHHH
Q 014492 315 SVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVT--------SGMDAKKLKDDL 383 (423)
Q Consensus 315 ~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~--------~~~~~~~l~~~L 383 (423)
+.-...+....|.+ .+|+..+..+. ++|.+.|++.+--.+.|.+|.-++++.. +...++.|...|
T Consensus 309 ~GrdmealAvGL~e~~~~~yl~~Rv~Qv----~YL~~~l~~~GVpi~~paGGHavfvda~~~lphip~eqFpaqala~el 384 (471)
T COG3033 309 AGRDMEALAVGLREGVNFDYLAHRVAQV----QYLADGLEEAGVPIVQPAGGHAVFVDAGKFLPHIPAEQFPAQALACEL 384 (471)
T ss_pred cchhHHHHHHHHHHhcCcHHHHHHHHHH----HHHHHHHHhcCCeeEecCCCceEEeehhhhcCCCChhhCcHHHHHHHH
Confidence 55555555555554 46776666554 5677888887643456777776776542 134577787777
Q ss_pred H-hCCcEEEeCCC-------C------CCCCeEEEEec----ChhhHHHHHHHHhhh
Q 014492 384 A-KMGVMIRHYNN-------K------ELKGYVRVSVG----KPEHTDALMECLMHL 422 (423)
Q Consensus 384 ~-~~gI~v~~~~~-------~------~~~~~iRis~~----~~~~~~~l~~al~~l 422 (423)
- +.||-...-+. . ..-..+|+++. +.+++|.+.++++++
T Consensus 385 y~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l 441 (471)
T COG3033 385 YKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKAL 441 (471)
T ss_pred HHHhCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhHHHHHHHHHHHH
Confidence 5 88987763221 1 11247999975 466788899988876
No 384
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.49 E-value=3.3e-05 Score=73.34 Aligned_cols=289 Identities=17% Similarity=0.136 Sum_probs=175.0
Q ss_pred HHHHHHHHHhCCCC--CcEEEeCCHHHHHHHHHHHhc--CC-----C-----CeEE-EcCCCchhhHHHHHHCC---CeE
Q 014492 133 RLRAALAKDSGLES--DHILVGCGADELIDLIMRCVL--DP-----G-----DKIV-DCPPTFTMYEFDAAVNG---AAV 194 (423)
Q Consensus 133 ~lr~~ia~~~g~~~--~~i~~t~G~~~al~~~~~~l~--~~-----g-----d~Vl-~~~p~y~~~~~~~~~~g---~~~ 194 (423)
++-..+.+..|.+. +.|+--.|+.+.+..+..+-- -| | +-|+ +..-+|.+....+..+| -.+
T Consensus 145 ~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~gtd~c 224 (510)
T KOG0629|consen 145 EVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGLGTDHC 224 (510)
T ss_pred HHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhccCCcee
Confidence 44455555567655 455444444444444332211 11 2 2343 55667888888998888 578
Q ss_pred EEecCCCCCCCCHHHHHHHhhcCC-----ceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCC-chhh
Q 014492 195 VKVPRKSDFSLNVELIADAVEREK-----PKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLE-SRME 267 (423)
Q Consensus 195 ~~v~~~~~~~~d~~~l~~~i~~~~-----~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~-~~~~ 267 (423)
+.|+.++.+.+++++||+.|.+.+ |-.|-.+.-...-|..-|++.+.++|+. ++|+.+|.+|.....-. ....
T Consensus 225 ~~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGglLmS~k~R~ 304 (510)
T KOG0629|consen 225 IKVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGLLMSRKHRH 304 (510)
T ss_pred EEecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEeecccccccccChhhHh
Confidence 999988888999999999885432 3333344567888999999999999998 99999999998633211 1111
Q ss_pred hh-ccCCcEEEEccChhhhcccCccccccccCHH-HHHHHHHhcC--------CCCCcH-----HHHHH-------HHHH
Q 014492 268 WV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-IIEYLWRAKQ--------PYNVSV-----AAEVA-------ACAA 325 (423)
Q Consensus 268 ~~-~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~-~~~~l~~~~~--------~~~~~~-----~~~~a-------~~~~ 325 (423)
.+ .....--+..+.+|..| +.+.++..+...+ ++++...... .|.+|. ..|.. ..-.
T Consensus 305 kl~Giera~SvtwnpHK~~g-aplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~D~FKlWlm 383 (510)
T KOG0629|consen 305 KLTGIERANSVTWNPHKLMG-APLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHVDVFKLWLM 383 (510)
T ss_pred hccCccccCceeecHHHhhc-CcchhhHHHHHHHHHHHhhcccchhhhhccCceeecccccccchhhcCccccHHHHHHH
Confidence 11 11111234567889887 7788887776543 4443332211 122211 11110 1112
Q ss_pred hCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCe-e---cCCCceEEEEEeCCC---------------CCHHHHHHHHH
Q 014492 326 LQN--PIYLEKVKEALIKERERLFKLLKDVPFLN-P---YPSYSNFILCEVTSG---------------MDAKKLKDDLA 384 (423)
Q Consensus 326 l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~---~p~~~~~~~~~~~~~---------------~~~~~l~~~L~ 384 (423)
++. ....++...+.-++.+++.+.|++-+... + .|...++.+..+|+. .-+..+...+.
T Consensus 384 wkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw~vp~~lR~~~~~~e~~~rL~kVaPkIK~~Mm 463 (510)
T KOG0629|consen 384 WKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVCFWYVPPSLRGWQENPERDSRLVKVAPKIKERMM 463 (510)
T ss_pred HHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCceEEEeeccCchHhccCcccchhhhHHHhhCcHHHHHHH
Confidence 221 12367788888899999999999876533 2 255566666555521 12344556667
Q ss_pred hCCcEEEeCCC-CCCCCeEEEEecC----hhhHHHHHHHHhhh
Q 014492 385 KMGVMIRHYNN-KELKGYVRVSVGK----PEHTDALMECLMHL 422 (423)
Q Consensus 385 ~~gI~v~~~~~-~~~~~~iRis~~~----~~~~~~l~~al~~l 422 (423)
++|-....+.. ...++++|+.++. ..+.+.+.+-|.++
T Consensus 464 ~~Gt~Mi~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerl 506 (510)
T KOG0629|consen 464 KKGTTMIGYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERL 506 (510)
T ss_pred hccceeeEecccccccchhheecccchhhhhhHHHHHHHHHHh
Confidence 78877766554 3446799998763 45667777777665
No 385
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.42 E-value=4.7e-05 Score=71.41 Aligned_cols=276 Identities=12% Similarity=0.077 Sum_probs=162.5
Q ss_pred hHHHHHHHHHHhCCCCC-cEEE-eCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhH-HHHHHCCC--eEEEec-CCC--C
Q 014492 131 SRRLRAALAKDSGLESD-HILV-GCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE-FDAAVNGA--AVVKVP-RKS--D 202 (423)
Q Consensus 131 ~~~lr~~ia~~~g~~~~-~i~~-t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~-~~~~~~g~--~~~~v~-~~~--~ 202 (423)
..+.++.+.+.++++.+ .|++ -.|++..+.++...|+.++..-.+..-.|.... ..++..+- ++.... ... +
T Consensus 52 ~~~a~~~lreLl~iPd~Y~VlflqGGat~qf~~~p~nLl~~~~~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~ 131 (365)
T COG1932 52 LEEAEKDLRELLNIPDDYKVLFLQGGATGQFAMAPMNLLGKRGTDYVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYG 131 (365)
T ss_pred HHHHHHHHHHHhCCCCCceEEEEcCccHHHHHHHHHhhhcccCceeEeeeehhHhHHHHHHHhcccccccccceeccCcc
Confidence 34677888889999665 5555 456777788888888876543133344554322 22333443 222222 112 2
Q ss_pred CCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcCCCEEEEccCCccccCCCchhhhhccCCcEEEEccCh
Q 014492 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFS 282 (423)
Q Consensus 203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~S 282 (423)
.-++++... +. .+...|+.|+-..-+|+-++. ...+.. +.++|+|-.-.-+.. +- +-..-.++-.+.-
T Consensus 132 ~iP~~~~~~--~~-~~~ayv~~~~NeTi~Gv~v~~--~p~~~~-~~~~v~D~SS~ilsr-~i-----Dvsk~dviyagaQ 199 (365)
T COG1932 132 SIPDLSKWD--FS-DNDAYVHFCWNETISGVEVPE--LPDIGS-DGLLVADASSAILSR-PI-----DVSKYDVIYAGAQ 199 (365)
T ss_pred CCCChhhcc--cC-CCccEEEEecCCcccceEccC--CCCCCC-CceEEEecccHHhcC-CC-----ChhHcceEEEehh
Confidence 233444433 32 234447788777778887761 111111 378899976543332 11 1122236777889
Q ss_pred hhhcccCccccccccCHHHHHHHHHhcC--------------CC-CCcHHHHHHHHHHhC---ChHHHHHHHHHHHHHHH
Q 014492 283 KRAGLAGLRVGYGAFPLSIIEYLWRAKQ--------------PY-NVSVAAEVAACAALQ---NPIYLEKVKEALIKERE 344 (423)
Q Consensus 283 K~~g~~G~R~G~i~~~~~~~~~l~~~~~--------------~~-~~~~~~~~a~~~~l~---~~~~~~~~~~~~~~~~~ 344 (423)
|.+|..| ++.++.++++++++..... .+ +++.++.+....+++ ....++.+.++-++..+
T Consensus 200 KnlGpaG--ltvvIvr~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~ 277 (365)
T COG1932 200 KNLGPAG--LTVVIVRPDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQ 277 (365)
T ss_pred hccCccc--eEEEEEcHHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 9999888 7889999999998865411 12 233333333333332 22336778888899999
Q ss_pred HHHHHHccCCCCee--cC--CCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHH
Q 014492 345 RLFKLLKDVPFLNP--YP--SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALME 417 (423)
Q Consensus 345 ~l~~~L~~~~~~~~--~p--~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~ 417 (423)
.|++.+++-+|... .+ ..-+-+.+++.+..-.+.|...+.++|+..--|. ...+.+|+++. ..++.+.|.+
T Consensus 278 ~LY~~id~s~fy~~~v~~~~RS~mnV~f~~~~~~ld~~fv~eae~~gl~~lkGh--r~vgGmRasiynA~~~e~veaL~~ 355 (365)
T COG1932 278 LLYDWIDKSDFYRNLVAKANRSRMNVTFTLVDAELDKGFVAEAEAAGLIYLKGH--RSVGGLRASIYNAVPLEDVEALTD 355 (365)
T ss_pred HHHHHHHhCCccccccchhhccceeEEEEcCcHHHHHHHHHHHHHcCCceeccc--cCCCceeeeeecCCCHHHHHHHHH
Confidence 99999988776542 22 1234566777644345667777777887776653 23345999975 3556677777
Q ss_pred HHhhh
Q 014492 418 CLMHL 422 (423)
Q Consensus 418 al~~l 422 (423)
.++.+
T Consensus 356 fm~~f 360 (365)
T COG1932 356 FMDWF 360 (365)
T ss_pred HHHHH
Confidence 66643
No 386
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.39 E-value=0.00029 Score=74.95 Aligned_cols=261 Identities=15% Similarity=0.112 Sum_probs=157.7
Q ss_pred HHHHHHHHHhCCCCCcEEEeCCHHHHHH---HHHHHhcCCCCeEEEcCCCchhhHHHHH----HCCCeEEEecCCCCCCC
Q 014492 133 RLRAALAKDSGLESDHILVGCGADELID---LIMRCVLDPGDKIVDCPPTFTMYEFDAA----VNGAAVVKVPRKSDFSL 205 (423)
Q Consensus 133 ~lr~~ia~~~g~~~~~i~~t~G~~~al~---~~~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~v~~~~~~~~ 205 (423)
++...++++.|.+-.|--+--|++.+-+ ++.+.--.+..+|+++.-.|+.+....+ ..|++++.
T Consensus 128 e~Qtmi~~LtGm~vaNASl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~--------- 198 (954)
T PRK12566 128 NFQQMTIDLTGLDLANASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV--------- 198 (954)
T ss_pred HHHHHHHHHhCchhhhhhhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE---------
Confidence 7888889999987555445455554433 3333211224679999999987665443 46777664
Q ss_pred CHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhh
Q 014492 206 NVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKR 284 (423)
Q Consensus 206 d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~ 284 (423)
+++++.+. .++.++++.+||. .|.+.+.+++.++++. |.++| +.+.- +.. ..+...+..+.+|++++. +.
T Consensus 199 --~~~~~~~~-~~~~~v~vq~P~~-~G~i~d~~~i~~~~h~~gal~~-~~~d~-laL--~ll~~Pge~GADI~vG~~-Q~ 269 (954)
T PRK12566 199 --DAVDNLAA-HAVFGALLQYPDT-HGEIRDLRPLIDQLHGQQALAC-VAADL-LSL--LVLTPPGELGADVVLGST-QR 269 (954)
T ss_pred --cchhhcCC-CCEEEEEEECCCC-ceEEccHHHHHHHHHHcCCEEE-EEeCH-HHH--hCCCChhhcCCcEEeeCC-Cc
Confidence 23334443 4688999999986 8999999999888887 77655 32211 110 111222345566777753 33
Q ss_pred hcc----cCccccccccCHHHHHHHH----------------------------HhcCCCCCcH----HHH-HHHHHHhC
Q 014492 285 AGL----AGLRVGYGAFPLSIIEYLW----------------------------RAKQPYNVSV----AAE-VAACAALQ 327 (423)
Q Consensus 285 ~g~----~G~R~G~i~~~~~~~~~l~----------------------------~~~~~~~~~~----~~~-~a~~~~l~ 327 (423)
||+ .|--.||+.+.+++.+++- +-+...++-+ .+. .+.+.++.
T Consensus 270 fGvp~~~GGP~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~ 349 (954)
T PRK12566 270 FGVPMGYGGPHAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFYAVYH 349 (954)
T ss_pred CCCCCCCCCCCeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHHh
Confidence 443 3445788887777665431 1122222111 122 22223444
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceE--EEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEE
Q 014492 328 NPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNF--ILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVS 405 (423)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~--~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis 405 (423)
.++.++++.++...+..++.+.|++.+ +.+... .+| +.+++ +.++.++.+...++||-++..+ ++.+.||
T Consensus 350 Gp~Gl~~ia~~~~~~a~~l~~~l~~~g-~~~~~~-~fF~~~~v~~--~~~~~~~~~~a~~~~~n~r~~~----~~~~~~s 421 (954)
T PRK12566 350 GPEGLKRIAQRVHRLTAILAAGLEAKG-IKRLNR-HFFDTLTLEV--GGAQAAIIESAEAARINLRILG----RGRLGVS 421 (954)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhcC-CccccC-CccceEEEEc--cCCHHHHHHHHHHCCCeeEEeC----CCeEEEE
Confidence 567788999999999999999999865 443222 445 33444 2257788888889999999875 4678888
Q ss_pred ecChhhHHHHHHHH
Q 014492 406 VGKPEHTDALMECL 419 (423)
Q Consensus 406 ~~~~~~~~~l~~al 419 (423)
+....+.+++...+
T Consensus 422 ~de~~~~~~~~~~~ 435 (954)
T PRK12566 422 LDETCDEATVARLF 435 (954)
T ss_pred eCCCCCHHHHHHHH
Confidence 86433334444433
No 387
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.32 E-value=6e-07 Score=84.78 Aligned_cols=214 Identities=19% Similarity=0.170 Sum_probs=50.8
Q ss_pred hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCch------hhHHHHHHCCCeEEEecCCCCCC
Q 014492 131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT------MYEFDAAVNGAAVVKVPRKSDFS 204 (423)
Q Consensus 131 ~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~------~~~~~~~~~g~~~~~v~~~~~~~ 204 (423)
+..+.+.++...|. +..+++|+...++.+++.+++. |.+|++..-.-. .+....+..|++++.|-..+ .
T Consensus 49 ~~~v~~ll~~ltgA--eaA~VvNnnaAAv~L~l~~la~-~~EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVGttN--~ 123 (367)
T PF03841_consen 49 YAHVEELLCELTGA--EAALVVNNNAAAVLLALNTLAK-GKEVIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTTN--R 123 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccc--cccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccc--c
Confidence 34577777777774 4567777777898888887764 566776543322 24456677899999987432 4
Q ss_pred CCHHHHHHHhhcCCceEEEEcCCCCCc--C--cCCCHHHHHHHHcC-CCEEEEccCCcccc--------CCCchhhhhcc
Q 014492 205 LNVELIADAVEREKPKCIFLTSPNNPD--G--SIINDEDLLKILEM-PILVVLDEAYTEFS--------GLESRMEWVKK 271 (423)
Q Consensus 205 ~d~~~l~~~i~~~~~~~i~l~~p~NPt--G--~~~~~~~l~~i~~~-~~~li~Deay~~~~--------~~~~~~~~~~~ 271 (423)
-.+++.+++|. +++.+++-.+++|-. | .-.+.+++.+|++. ++++|+|-.-..+. ..++....+ .
T Consensus 124 t~~~Dye~AI~-e~Ta~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~-~ 201 (367)
T PF03841_consen 124 THLSDYEKAIT-ENTAALLKVHTSNFRIQGFTGEVSLEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYL-A 201 (367)
T ss_dssp --------------------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT----------CC-C
T ss_pred ccccccccccc-ccccccccccccccccccccccccHHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHh-h
Confidence 45788999997 788888777877763 2 13488899999987 99999998753221 112222222 3
Q ss_pred CCcEEEEccChhhhcccCccccccccCHHHHHHHHHh--cCCCCCcHHHHHHHHHHhCC---h----------HHHHHHH
Q 014492 272 HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQN---P----------IYLEKVK 336 (423)
Q Consensus 272 ~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~l~~---~----------~~~~~~~ 336 (423)
.+..+++.|-.|.+| |-..|.+++.+++++++++. .+.+-+.-....++.+.|+. + ..+.+..
T Consensus 202 ~GaDlV~fSGdKlLG--GPQaGiI~Gkk~lI~~lk~~pl~RalrvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~ 279 (367)
T PF03841_consen 202 AGADLVTFSGDKLLG--GPQAGIIVGKKELIEKLKKHPLGRALRVDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSL 279 (367)
T ss_dssp CT-SEEEEETTSSSS--S-S-EEEEEEHHHHHHHHHHHHTTT-B--HHHHHHHHHHHHH---------------------
T ss_pred cCCCEEEEECCCcCC--CCCeEEEEeCHHHHHHHhhCCCcceEeeCHHHHHHHHHHHHHHHHhhcccccccccccccccc
Confidence 455688899999876 56689999999999998764 34456666665555555541 1 1244455
Q ss_pred HHHHHHHHHHHHHHccC
Q 014492 337 EALIKERERLFKLLKDV 353 (423)
Q Consensus 337 ~~~~~~~~~l~~~L~~~ 353 (423)
+.++++.+++...|+..
T Consensus 280 ~~L~~rA~~l~~~l~~~ 296 (367)
T PF03841_consen 280 EELRARAERLAAQLKAA 296 (367)
T ss_dssp -----------------
T ss_pred ccccccccccccccccc
Confidence 66777777777777654
No 388
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=97.92 E-value=0.0022 Score=61.55 Aligned_cols=278 Identities=17% Similarity=0.065 Sum_probs=142.1
Q ss_pred HhCCC-CCcEEEeCCHHHH-HHHHHHHhc--CCCCeEEEcCCCchhhHHHHHHCCCeEEEecC---CCCCCCCHHHHHHH
Q 014492 141 DSGLE-SDHILVGCGADEL-IDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR---KSDFSLNVELIADA 213 (423)
Q Consensus 141 ~~g~~-~~~i~~t~G~~~a-l~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~---~~~~~~d~~~l~~~ 213 (423)
..|+. ....++.+.+|.. +.+.+.++. ..++.|+.+.-.+-.....+..+|.+++.||. .+....|.+.+++.
T Consensus 68 ~~G~~~~~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d~l~td~~~ie~~ 147 (389)
T PF05889_consen 68 LAGLRSVKSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEGDELITDLEAIEAK 147 (389)
T ss_dssp HTTHTTHCEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETTEEEEHHHHHHHH
T ss_pred HcCCccccceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEeeccCCCCeeeccHHHHHHH
Confidence 34764 3556777766633 334444443 34688888777776666667779999999992 23334568888888
Q ss_pred hhc--CCceEEEEcCCCCCcCcCCC-HHHHHHHHcC-CCEEEEccCCccccCCCchhhhh----ccCCcEEEEccChhhh
Q 014492 214 VER--EKPKCIFLTSPNNPDGSIIN-DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWV----KKHDNLIVLRTFSKRA 285 (423)
Q Consensus 214 i~~--~~~~~i~l~~p~NPtG~~~~-~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~----~~~~~~i~i~S~SK~~ 285 (423)
+++ .++.+.++++++---|..-+ .+++.+||+. |+..|+-.||+-=.. .....+ ....-.+++.|.-|.|
T Consensus 148 i~~~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~--~~~~~i~~a~~~GRvda~vqS~dkNF 225 (389)
T PF05889_consen 148 IEELGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSS--KCMHLIQQAWRVGRVDAFVQSTDKNF 225 (389)
T ss_dssp HHHHCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-H--HHHHHHHHHHHHSTCSEEEEEHHHHH
T ss_pred HHHhCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHH--HHHHHHHHHHhcCCcceeeeecCCCE
Confidence 864 34567777777655667776 8889999987 999999999983110 011111 1123347899999999
Q ss_pred cccCcccccccc-CHHHHHHHHHhcCCCCCcHHHHHHHHHHhCCh--HH---HHHHHHHHHHHHHHHHHHHccCCCCe-e
Q 014492 286 GLAGLRVGYGAF-PLSIIEYLWRAKQPYNVSVAAEVAACAALQNP--IY---LEKVKEALIKERERLFKLLKDVPFLN-P 358 (423)
Q Consensus 286 g~~G~R~G~i~~-~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~--~~---~~~~~~~~~~~~~~l~~~L~~~~~~~-~ 358 (423)
-. +..-+.+.+ .+..+..+.+.-..-....+.......++.-+ .| +.++.+-+....+++.+.-++.+... .
T Consensus 226 ~V-PvGgai~As~~~~~i~~vs~~YpGRas~sp~ld~~itLl~LG~~g~~~ll~~r~~~f~~l~erl~~~aee~~e~ll~ 304 (389)
T PF05889_consen 226 MV-PVGGAIMASFDPSGILAVSKEYPGRASASPSLDLFITLLSLGCTGYGALLKERKASFPYLKERLKKWAEEVGERLLE 304 (389)
T ss_dssp CE-ESSHEEEEESSHHHHHHHHHTSHSHBTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEBSS
T ss_pred Ee-cCCCcEEEecCHHHHHHHHHHhhhhhhcccchHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcC
Confidence 54 332333433 56777777654322112222223333333321 11 22333333333333333333333111 1
Q ss_pred cCCCceEEEEEeCC--C---CCHHHHHHHHHhCCc---EE-EeCCC-------CCCCCeEEEEe--c-ChhhHHHHHHHH
Q 014492 359 YPSYSNFILCEVTS--G---MDAKKLKDDLAKMGV---MI-RHYNN-------KELKGYVRVSV--G-KPEHTDALMECL 419 (423)
Q Consensus 359 ~p~~~~~~~~~~~~--~---~~~~~l~~~L~~~gI---~v-~~~~~-------~~~~~~iRis~--~-~~~~~~~l~~al 419 (423)
.|....-+.+.++. . .+...|...|..+|| .+ .+... .....|+-++- + +.+|.|.+.+.|
T Consensus 305 ~p~N~is~a~tl~~l~~~~~k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~AsaiG~~~eevd~~v~rL 384 (389)
T PF05889_consen 305 TPRNHISMAFTLDTLYEISQKDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYPCPYLTAASAIGMTREEVDYFVKRL 384 (389)
T ss_dssp STT-SSEEEEE-TTCCTCCSSHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--SSSEEEEEE-TT--HHHHHHHHHHH
T ss_pred CCCCCeeEEEECccchhhccchhhhHHHHHHhCCcccceeeccCCCcccccCCCCchHHHHHHHHhCCCHHHHHHHHHHH
Confidence 24343334445441 1 234678888887765 32 22211 01126788853 3 455666666666
Q ss_pred hh
Q 014492 420 MH 421 (423)
Q Consensus 420 ~~ 421 (423)
++
T Consensus 385 ~k 386 (389)
T PF05889_consen 385 DK 386 (389)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 389
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.88 E-value=0.0022 Score=64.30 Aligned_cols=282 Identities=16% Similarity=0.133 Sum_probs=154.6
Q ss_pred HHHHHHHHHhCCCCCcEEEeCCHH---HHHHHHHHHhcCCCC----eEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCC
Q 014492 133 RLRAALAKDSGLESDHILVGCGAD---ELIDLIMRCVLDPGD----KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSL 205 (423)
Q Consensus 133 ~lr~~ia~~~g~~~~~i~~t~G~~---~al~~~~~~l~~~gd----~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~ 205 (423)
+|++.+++..|.+.-.+..-+|++ .++..+-..+...|+ ..+++...|......+.++|.++++|..+.++.+
T Consensus 586 ~Le~~Lc~iTG~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~MagmkvvpV~~~~~G~i 665 (1001)
T KOG2040|consen 586 ELEKDLCEITGFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGMKVVPVGCDANGNI 665 (1001)
T ss_pred HHHHHhheeecccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhhHHhcCCEEEEeeccCCCCc
Confidence 455555555575433333334443 334333333334442 3567888888777888899999999999888899
Q ss_pred CHHHHHHHhhc--CCceEEEEcCCCCCcCcC-CCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccC
Q 014492 206 NVELIADAVER--EKPKCIFLTSPNNPDGSI-INDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF 281 (423)
Q Consensus 206 d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~-~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~ 281 (423)
|..+|++..++ ++..++.++.|+. .|+. -.++++.++.+. |.-|..|.+-..-.-+-. ..++.+..+.=--+
T Consensus 666 d~~dLk~kaekh~~~Laa~MvTYPST-~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqVGlc---~pGd~GaDV~HLNL 741 (1001)
T KOG2040|consen 666 DMVDLKAKAEKHKDNLAALMVTYPST-HGVFEEGIDDICDIIHEHGGQVYLDGANMNAQVGLC---RPGDIGADVCHLNL 741 (1001)
T ss_pred cHHHHHHHHHHhhhhhheeEEecccc-cccccccHHHHHHHHHhcCCEEEecCCCccceeccc---CCccccccceeecc
Confidence 99999988764 3567888888875 3543 244555555544 888999988643211100 01123333444457
Q ss_pred hhhhccc----CccccccccCHHHHHHHHHh------------------cCCCCCcHHHHHHHHHHhC--ChHHHHHHHH
Q 014492 282 SKRAGLA----GLRVGYGAFPLSIIEYLWRA------------------KQPYNVSVAAEVAACAALQ--NPIYLEKVKE 337 (423)
Q Consensus 282 SK~~g~~----G~R~G~i~~~~~~~~~l~~~------------------~~~~~~~~~~~~a~~~~l~--~~~~~~~~~~ 337 (423)
+|.|.+| |-.+|=|...+.+...+-.. ..+|+.+. ......++++ ....+...-+
T Consensus 742 HKTFcIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~-ILpISwaYikmMG~~GL~~as~ 820 (1001)
T KOG2040|consen 742 HKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSAL-ILPISWAYIKMMGSGGLKDASK 820 (1001)
T ss_pred cceeeecCCCCCCCCCccchhhhccccCCCCCccCCCCCCCCCCccceeccCCCcce-eehhHHHHHHHhcccccchhhH
Confidence 7887665 22233333333332222110 01121111 1111122222 1122333333
Q ss_pred HHHHHHHHHHHHHccCCCCeecCCCce----EEEEEe-----CCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC
Q 014492 338 ALIKERERLFKLLKDVPFLNPYPSYSN----FILCEV-----TSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK 408 (423)
Q Consensus 338 ~~~~~~~~l~~~L~~~~~~~~~p~~~~----~~~~~~-----~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~ 408 (423)
.---+.+++.++|+..-.+......+. |+ +++ ..++.+.+++++|.++|.--...+ .+..+++-|-.+.
T Consensus 821 ~AiLNaNYMakRLe~hYkil~~~~~~~vaHEFI-lD~r~fK~~agieavDvAKRL~DYgFHaPTms-wPV~gtLMIEPTE 898 (1001)
T KOG2040|consen 821 IAILNANYMAKRLESHYKILFRGENGLVAHEFI-LDLRPFKKTAGIEAVDVAKRLMDYGFHAPTMS-WPVAGTLMIEPTE 898 (1001)
T ss_pred HHhhhhHHHHHHHhhccceeEecCCcceeeeee-eechhhccccCCcHHHHHHHHHhccCCCCccc-cccCCceEeccCc
Confidence 333467788888976422222222221 22 222 246889999999999986655444 3456788888776
Q ss_pred hhhHHHHHHHHhh
Q 014492 409 PEHTDALMECLMH 421 (423)
Q Consensus 409 ~~~~~~l~~al~~ 421 (423)
.++.+++++.++.
T Consensus 899 SE~k~ElDRfcdA 911 (1001)
T KOG2040|consen 899 SEDKAELDRFCDA 911 (1001)
T ss_pred cccHHHHHHHHHH
Confidence 6655666655544
No 390
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=97.80 E-value=0.0033 Score=57.64 Aligned_cols=280 Identities=16% Similarity=0.103 Sum_probs=165.9
Q ss_pred hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCC---CeEEEcCCCch----hhHHHHHHCCCeE----EEec-
Q 014492 131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPG---DKIVDCPPTFT----MYEFDAAVNGAAV----VKVP- 198 (423)
Q Consensus 131 ~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~g---d~Vl~~~p~y~----~~~~~~~~~g~~~----~~v~- 198 (423)
.+..-..++...|...++|.+.|+-+-.++.++..+.+|- -+|+++.-.|+ .+...++..|..+ +.+.
T Consensus 113 De~il~l~~~iVGA~e~EvavmNsLTvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~ieP 192 (465)
T KOG3846|consen 113 DEPILPLLAPIVGAQENEVAVMNSLTVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEP 192 (465)
T ss_pred chhhhhhhhhhccCCchhhhhHhhhhhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecc
Confidence 4567788888999988999999999999999999998775 46888877775 5566777788764 2332
Q ss_pred CCCCCCCCHHHHHHHhhcC--CceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcE
Q 014492 199 RKSDFSLNVELIADAVERE--KPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNL 275 (423)
Q Consensus 199 ~~~~~~~d~~~l~~~i~~~--~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~ 275 (423)
.+.+..+-.+++.+.|+++ .+.+|+++..+.-||+.++...|..--+. |++|=.|-+|+.. .....+..++..
T Consensus 193 REGEetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvg----NVpL~LHdWgVD 268 (465)
T KOG3846|consen 193 REGEETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVG----NVPLQLHDWGVD 268 (465)
T ss_pred cccccchhHHHHHHHHHhcCCeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhhhhc----CCceEEeecCCc
Confidence 2223456778888888643 45667777899999999999998855555 8999899888722 222233355555
Q ss_pred EEEccChhhhcccCcc-ccccccCHHH----HHHHH---------HhcC-----------CC---CCcHHHHHHHHHHhC
Q 014492 276 IVLRTFSKRAGLAGLR-VGYGAFPLSI----IEYLW---------RAKQ-----------PY---NVSVAAEVAACAALQ 327 (423)
Q Consensus 276 i~i~S~SK~~g~~G~R-~G~i~~~~~~----~~~l~---------~~~~-----------~~---~~~~~~~~a~~~~l~ 327 (423)
+-|+---| ++.+|-. +|-+...+.. ..++. +.++ .| +++.+...+....|+
T Consensus 269 FACWCSYK-YlnaGaGgIgGlFvHekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe 347 (465)
T KOG3846|consen 269 FACWCSYK-YLNAGAGGIGGLFVHEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLE 347 (465)
T ss_pred eEEEeeec-ccccCCCccceeeeehhhhcchhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHH
Confidence 66655556 3334422 3333332221 12221 0000 01 334444444444443
Q ss_pred Ch--HHHHHHHHHHHHHHHHHHHHHccCC-----------CCe-ecC----CCceEEEEEeCCCCCHHHHHHHHHhCCcE
Q 014492 328 NP--IYLEKVKEALIKERERLFKLLKDVP-----------FLN-PYP----SYSNFILCEVTSGMDAKKLKDDLAKMGVM 389 (423)
Q Consensus 328 ~~--~~~~~~~~~~~~~~~~l~~~L~~~~-----------~~~-~~p----~~~~~~~~~~~~~~~~~~l~~~L~~~gI~ 389 (423)
-- --+++.+++---...++...++... ++. +.| +.|.-+.+.+. .+.+.++++|.++|+.
T Consensus 348 ~F~q~~~~~lRkrS~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fs--sp~~~vfqeL~krGv~ 425 (465)
T KOG3846|consen 348 LFAQFNINELRKRSLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFS--SPTPKVFQELHKRGVI 425 (465)
T ss_pred HHHHhhHHHHhhhhhhHHhHHHHHHHHhcccCchhhhcceeEEEeCCcccccccceEEEEeC--CCchHHHHHHHHcCee
Confidence 21 1134444443333333333332211 111 122 23445555553 2457899999999998
Q ss_pred EEeCCCCCCCCeEEEEec----ChhhHHHHHHHHhh
Q 014492 390 IRHYNNKELKGYVRVSVG----KPEHTDALMECLMH 421 (423)
Q Consensus 390 v~~~~~~~~~~~iRis~~----~~~~~~~l~~al~~ 421 (423)
+-... ++.||+... +-.+.-.+..+|..
T Consensus 426 ~DkR~----PNvIRvAPvpLYN~f~Dvy~f~n~L~e 457 (465)
T KOG3846|consen 426 GDKRR----PNVIRVAPVPLYNTFSDVYIFVNALNE 457 (465)
T ss_pred ccccC----CCceEeecchhhccHHHHHHHHHHHHH
Confidence 75543 678999853 44455555555543
No 391
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=97.80 E-value=0.00091 Score=62.35 Aligned_cols=198 Identities=17% Similarity=0.155 Sum_probs=110.5
Q ss_pred HHHHHHHhhcC-----CceEEEEcCCCCCcCc-CCCHHHHHH---HHcC-CCEEEEccCCccccCCCchhh----hhccC
Q 014492 207 VELIADAVERE-----KPKCIFLTSPNNPDGS-IINDEDLLK---ILEM-PILVVLDEAYTEFSGLESRME----WVKKH 272 (423)
Q Consensus 207 ~~~l~~~i~~~-----~~~~i~l~~p~NPtG~-~~~~~~l~~---i~~~-~~~li~Deay~~~~~~~~~~~----~~~~~ 272 (423)
++++++.|.+. .+.++++..-+..-|. ..+.+.++. |++. ++.+|+||++......+..+. .++..
T Consensus 255 l~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~P 334 (484)
T KOG1405|consen 255 LAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSP 334 (484)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCC
Confidence 45666666432 2456676666777775 446665554 4444 999999999976543332211 11122
Q ss_pred CcEEEEccChhhhcccCccccccccCHHHH-HHHHHhcCCCCCcHHHHHHHH---HHhCChHHHHHHHHHHHHHHHHHHH
Q 014492 273 DNLIVLRTFSKRAGLAGLRVGYGAFPLSII-EYLWRAKQPYNVSVAAEVAAC---AALQNPIYLEKVKEALIKERERLFK 348 (423)
Q Consensus 273 ~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~-~~l~~~~~~~~~~~~~~~a~~---~~l~~~~~~~~~~~~~~~~~~~l~~ 348 (423)
. -+.+|||-|- .| ||.. +++++ ..-.+.-..|...+.-...+. ..+.+++.+++.. +.-+.|.+
T Consensus 335 p---D~vTFSKK~q-~g---Gffh-~~~frpn~pYrifNTWmGdP~k~lll~~vv~~I~~~~Ll~n~~----~vG~~l~~ 402 (484)
T KOG1405|consen 335 P---DVVTFSKKFQ-TG---GFFH-DEEFRPNEPYRIFNTWMGDPSKNLLLEEVVQEIKREDLLNNVA----HVGKALLK 402 (484)
T ss_pred c---cceehhhhhh-cC---cccc-CcccCCCchHHHhhhhcCChHHHHHHHHHHHHHhHHHHHHHHH----HHHHHHHH
Confidence 2 2346899885 55 6554 33332 112222234543333222222 3333334344333 33344444
Q ss_pred HHc----cCCC-CeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014492 349 LLK----DVPF-LNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM 420 (423)
Q Consensus 349 ~L~----~~~~-~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~ 420 (423)
.|. +.+. +.-..+.|.|+.+++|.+.-.+.++..++-+||-+-.++ ...||+-.+ ...+.+-+.+.++
T Consensus 403 gL~~Lq~~~p~~~~~~RGrGTF~a~d~ps~~~Rdk~i~~~~~nGv~~GGCg----~~siRfRPsLvf~~~Ha~i~l~~~~ 478 (484)
T KOG1405|consen 403 GLLELQAKYPGKINNLRGRGTFIAWDCPSGSIRDKLILIARLNGVNLGGCG----DKSIRFRPSLVFRKHHADIFLDIFD 478 (484)
T ss_pred HHHHHHHhCchhhhcccccceEEEEeCCChHHHHHHHHHHHHcCceecccc----cceeeeccceeehhhhHHHHHHHHH
Confidence 443 3443 223456899999999987778889998989999887766 467788654 2233344444444
No 392
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=97.73 E-value=0.015 Score=56.39 Aligned_cols=248 Identities=9% Similarity=0.018 Sum_probs=128.3
Q ss_pred eEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCC----ceEEEEcCCC-CCcCcCCCHHHHHHHHcC
Q 014492 172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREK----PKCIFLTSPN-NPDGSIINDEDLLKILEM 246 (423)
Q Consensus 172 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~----~~~i~l~~p~-NPtG~~~~~~~l~~i~~~ 246 (423)
.+.+.+-++.+.+..+...|+++..++.+.+++++.+.|+++|.+.. +-.+++.+.. .-+-..-.++++..+|+.
T Consensus 184 V~Y~SDqahssveka~~i~~VklR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l~elg~Vc~~ 263 (511)
T KOG0628|consen 184 VAYCSDQAHSSVEKACLIAGVKLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDELEELGPVCRE 263 (511)
T ss_pred eEEecCcccchHHHhHhhcceeEEEeecccCcCCCHHHHHHHHHHHHhCCCccEEEEEeecCccccccccHHHhcchhhh
Confidence 34567788889999999999999999988899999999999997532 2233333332 112233467778888887
Q ss_pred -CCEEEEccCCccccCCCc-hhhhhccCC-cEEEEccChhhhcccCccccccc------------cCHHHHHHH-HHhcC
Q 014492 247 -PILVVLDEAYTEFSGLES-RMEWVKKHD-NLIVLRTFSKRAGLAGLRVGYGA------------FPLSIIEYL-WRAKQ 310 (423)
Q Consensus 247 -~~~li~Deay~~~~~~~~-~~~~~~~~~-~~i~i~S~SK~~g~~G~R~G~i~------------~~~~~~~~l-~~~~~ 310 (423)
|+|+.+|.+|++-++.-. .......-+ ..=+....||. ++.-.-+.-+. .++..++.- .....
T Consensus 264 ~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~-~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~~~~~~~ 342 (511)
T KOG0628|consen 264 EGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKW-LLVNFDCSPLWVKDGTKLSRAFNVDPLYLKHAYQGSAP 342 (511)
T ss_pred cCEEEEeehhhccccccCHHHHHHhhcchhhccccCChhhe-eEEeeeeecceeecCceeeeeeecChHhhcchhhccCC
Confidence 999999999995443211 111110000 00112223442 22222111111 122222111 11111
Q ss_pred C---CCCcHHH-HHHHHHH--hCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCe-ecCCCceEEEEEeCC-CCCHHHHH
Q 014492 311 P---YNVSVAA-EVAACAA--LQN--PIYLEKVKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTS-GMDAKKLK 380 (423)
Q Consensus 311 ~---~~~~~~~-~~a~~~~--l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~~~~~~~~~-~~~~~~l~ 380 (423)
. |.++..- -.++..+ ++. .+.+++..++..+..+.+.+.+.+-+... +.+..-..+.+++.+ +...+.|.
T Consensus 343 Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~~~lgLvcFRlk~~N~~ne~Ll 422 (511)
T KOG0628|consen 343 DYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVNKRILGLVCFRLKGDNEINEALL 422 (511)
T ss_pred CccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeecccccceeEEeecCCcHHHHHHH
Confidence 1 2222110 0111111 111 12233333333445555555554443333 344444556677753 34567788
Q ss_pred HHHH-hCCcEEEeCCCCCCCCeEEEEecC-hhhHHHHHHHHhh
Q 014492 381 DDLA-KMGVMIRHYNNKELKGYVRVSVGK-PEHTDALMECLMH 421 (423)
Q Consensus 381 ~~L~-~~gI~v~~~~~~~~~~~iRis~~~-~~~~~~l~~al~~ 421 (423)
+++. ...|.+.+.. ..+.-.||++++. ..+.+++.++.+.
T Consensus 423 ~~in~~g~i~l~~~~-l~gk~vlRf~V~s~~t~~~di~~a~~~ 464 (511)
T KOG0628|consen 423 NRLNSSGRIHLVPAS-LHGKFVLRFAVCSPLTNESDIDEAWKI 464 (511)
T ss_pred HHHHhcCcEEEEEee-ecceEEEEEEecCCCCcHHHHHHHHHH
Confidence 8887 5678787765 3345579999863 2233555555443
No 393
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.07 E-value=0.32 Score=49.41 Aligned_cols=264 Identities=17% Similarity=0.194 Sum_probs=146.9
Q ss_pred HHHHHHHHHhCCCCCc-EEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHH----CCCeEEEecCCCCCCCCH
Q 014492 133 RLRAALAKDSGLESDH-ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV----NGAAVVKVPRKSDFSLNV 207 (423)
Q Consensus 133 ~lr~~ia~~~g~~~~~-i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~----~g~~~~~v~~~~~~~~d~ 207 (423)
.....+++..|++-.+ -++--|+..+=.+++..-..++.++++..-+|+-....++- +|++++..+ +
T Consensus 167 NyQTmi~dlTGL~~aNASLLDEgTAaaEAm~l~~~~~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~~--------~ 238 (1001)
T KOG2040|consen 167 NYQTMITDLTGLPMANASLLDEGTAAAEAMALCNRINKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVSD--------I 238 (1001)
T ss_pred hhHHhhhhccCCcccchhhhccchhHHHHHHHHHhhcccceEEecCCCCcchhhhhhccccccceeEEecC--------H
Confidence 3456667777876543 34444544443333333345667799999999865555432 344433322 2
Q ss_pred HHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhc
Q 014492 208 ELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG 286 (423)
Q Consensus 208 ~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 286 (423)
++...- ..+...+++..|.. .|.+.+.+++.++++. +.++++-.--..+ ..+......+..|.++|--. ||
T Consensus 239 ~~~~~s--~~~v~gvlvQYP~t-~G~i~d~~el~~~a~~~~s~vv~atDLLaL----tiLrpPgefGaDIavGSsQR-FG 310 (1001)
T KOG2040|consen 239 KEADYS--SKDVSGVLVQYPDT-EGSVLDFDELVELAHANGSLVVMATDLLAL----TILRPPGEFGADIAVGSSQR-FG 310 (1001)
T ss_pred HHhhcc--ccceeEEEEEcCCC-CCcccCHHHHHHHhhccCceEEEeehhhHH----HccCChhhcCceeeeccccc-cC
Confidence 222221 24677888888877 6999999999999998 6555432111111 11222234566688888544 55
Q ss_pred cc----CccccccccCHHHHHHH----------------------------HHhcCCCCCcHH-----HHHHHHHHhCCh
Q 014492 287 LA----GLRVGYGAFPLSIIEYL----------------------------WRAKQPYNVSVA-----AEVAACAALQNP 329 (423)
Q Consensus 287 ~~----G~R~G~i~~~~~~~~~l----------------------------~~~~~~~~~~~~-----~~~a~~~~l~~~ 329 (423)
+| |--.||....+++.+.+ ++-+...++-.. ...|..+.+..+
T Consensus 311 VPlGYGGPHAaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDKATSNICTAQALLANmaAmyaiYHGp 390 (1001)
T KOG2040|consen 311 VPLGYGGPHAAFFAVSESLVRMMPGRIIGVTKDALGKEAYRLALQTREQHIRRDKATSNICTAQALLANMAAMYAIYHGP 390 (1001)
T ss_pred ccccCCCchHHHHHHHHHHHhhCCCceEeeeecccccHHHHHHHHHHHHHhhhhccchhhhHHHHHHHHHHHHHhhhcCc
Confidence 44 22233333333322211 011111111110 122333444446
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec--
Q 014492 330 IYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-- 407 (423)
Q Consensus 330 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~-- 407 (423)
..++++.+++....-.|...|++.+- .+. ...+|=.+++.-+-+.+++.++..+++|-++... ++.|-+++-
T Consensus 391 ~gL~~IArrvh~~T~~l~~~l~~agh-el~-~k~fFDTLkI~~~~s~~~~l~rA~~~~iNlr~~e----d~tigvslDET 464 (1001)
T KOG2040|consen 391 HGLKEIARRVHNLTLILAEGLKNAGH-ELQ-HKPFFDTLKIRCGCSAEEVLDRAAKRQINLRLVE----DGTIGVSLDET 464 (1001)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcch-hhc-cccccceEEEEecCcHHHHHHHHHhhcCceEEee----cCceEEeeccc
Confidence 77889999999999999999987662 221 2235544444324478999999888889888776 566777774
Q ss_pred -ChhhHHHHHHH
Q 014492 408 -KPEHTDALMEC 418 (423)
Q Consensus 408 -~~~~~~~l~~a 418 (423)
+..|.++|...
T Consensus 465 v~~~DvddLl~v 476 (1001)
T KOG2040|consen 465 VTEKDVDDLLWV 476 (1001)
T ss_pred ccHHHHHHHHHH
Confidence 34444555443
No 394
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=95.73 E-value=0.68 Score=42.49 Aligned_cols=272 Identities=11% Similarity=0.074 Sum_probs=146.8
Q ss_pred HHHHHHHHHHhCCCCC--cEEEeCCHHHHHHHHHHHhc--CCC---CeEEEcCCCch--hhHHHHHHCCCe-EEEecCCC
Q 014492 132 RRLRAALAKDSGLESD--HILVGCGADELIDLIMRCVL--DPG---DKIVDCPPTFT--MYEFDAAVNGAA-VVKVPRKS 201 (423)
Q Consensus 132 ~~lr~~ia~~~g~~~~--~i~~t~G~~~al~~~~~~l~--~~g---d~Vl~~~p~y~--~~~~~~~~~g~~-~~~v~~~~ 201 (423)
.+.+..+.++++++.+ -+++-.|++.-+..+...|+ +.| |-|++ -+|. .+..+.+ +|.. .+..+...
T Consensus 55 ~~tes~lreLlniPdn~~vlf~QGGGt~qFaAv~lNL~glK~g~~AdYiVT--GsWS~KA~~EAkk-~~~~~~V~~~~k~ 131 (370)
T KOG2790|consen 55 NDTESLLRELLNIPDNYKVLFLQGGGTGQFAAVPLNLIGLKHGRCADYVVT--GSWSAKAAEEAKK-YGTPNIVIPKLKS 131 (370)
T ss_pred HHHHHHHHHHHcCCCceeEEEEeCCCcccccccchhhhccccCCccceEEe--ccccHHHHHHHHh-hCCceEEeccccc
Confidence 4566667778888543 44566677777777766676 344 44554 3453 4444444 4433 33333211
Q ss_pred -C--CCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEE
Q 014492 202 -D--FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIV 277 (423)
Q Consensus 202 -~--~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~ 277 (423)
. --+|.+.++. +++.+.++.|.--...|+-++.-- +-+- +.++|.|-.-- |...+- +.....++
T Consensus 132 y~ygkvPd~~~w~~---~~da~yvyyCaNETVHGVEf~~~P---~~~~~~~vlVaDmSSn-flSrpv-----Dvsk~gvi 199 (370)
T KOG2790|consen 132 YTYGKVPDPSTWEL---NPDASYVYYCANETVHGVEFDFIP---VNDPKGAVLVADMSSN-FLSRPV-----DVSKFGVI 199 (370)
T ss_pred cccCcCCChhhccc---CCCccEEEEecCceeeceecCCCC---CCCCCCceEEEecccc-hhcCCc-----cchhcceE
Confidence 1 2345555543 245668888866666676554322 1122 77888886533 322221 12233477
Q ss_pred EccChhhhcccCccccccccCHHHHHHHHHhcC-------------CC-CCcHHHHHHHHHHh---CChHHHHHHHHHHH
Q 014492 278 LRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ-------------PY-NVSVAAEVAACAAL---QNPIYLEKVKEALI 340 (423)
Q Consensus 278 i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~-------------~~-~~~~~~~~a~~~~l---~~~~~~~~~~~~~~ 340 (423)
+.+.-|.+|.+|+ -.++..++++........ .| +++.+..++.--.+ .....+..+.+.-.
T Consensus 200 ~aGAQKN~G~aG~--Tvvivr~dllg~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~ 277 (370)
T KOG2790|consen 200 FAGAQKNVGPAGV--TVVIVRKDLLGNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQ 277 (370)
T ss_pred EeccccccCcccc--EEEEEehhhhcccccCCccccceeeeccccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHH
Confidence 7888999999985 446667887765543321 12 23333333222222 22233667777777
Q ss_pred HHHHHHHHHHccCCCCeec---CC--CceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhH
Q 014492 341 KERERLFKLLKDVPFLNPY---PS--YSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHT 412 (423)
Q Consensus 341 ~~~~~l~~~L~~~~~~~~~---p~--~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~ 412 (423)
+..+.+++.+.+..+...- |. .-+-+.+++.+..-.++|.....+++..-..|. ..-|.+|-|+= +-++.
T Consensus 278 ~KskllYd~iD~s~gfy~cpVe~~~RS~MNV~Fri~~d~Le~eFLkeA~~~~mv~LKGh--RSVGGiRASlYNAisv~~~ 355 (370)
T KOG2790|consen 278 EKSKLLYDAIDNSNGFYRCPVEPSVRSRMNVPFRIEKDELEAEFLKEAAKEHMVQLKGH--RSVGGIRASLYNAISVEEV 355 (370)
T ss_pred HHHHHHHHHHHhcCCeEEcccchhhhhhcccceeecchHHHHHHHHHHHHhhhhccccc--cccccchhhhhccccHHHH
Confidence 8888899999876433322 22 234566666432223445544444443322222 22456888852 34556
Q ss_pred HHHHHHHhhh
Q 014492 413 DALMECLMHL 422 (423)
Q Consensus 413 ~~l~~al~~l 422 (423)
++|...++.+
T Consensus 356 q~L~~~m~~F 365 (370)
T KOG2790|consen 356 QKLAAFMKEF 365 (370)
T ss_pred HHHHHHHHHH
Confidence 7787777654
No 395
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=93.15 E-value=0.65 Score=42.07 Aligned_cols=120 Identities=14% Similarity=0.100 Sum_probs=69.1
Q ss_pred HHCCCeEEEec--CC-CCCCCCHHHHHHHhhcCCceEEEEcCCC----CCcCcCCCHHHHHHHHcC-CCEEEEccCCccc
Q 014492 188 AVNGAAVVKVP--RK-SDFSLNVELIADAVEREKPKCIFLTSPN----NPDGSIINDEDLLKILEM-PILVVLDEAYTEF 259 (423)
Q Consensus 188 ~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~----NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~ 259 (423)
-.+|.+++.+. .+ +...-|++.+++.+++-....|...+-. -| -..-..+++..||.. +++-|+..+|..-
T Consensus 121 ~~agfepiiie~i~d~d~l~tdleav~~~iee~g~dcilci~sttscfap-r~pd~leaiaaica~~diphivnnayglq 199 (432)
T KOG3843|consen 121 IHAGFEPIIIENILDGDELITDLEAVEAIIEELGEDCILCIHSTTSCFAP-RSPDNLEAIAAICAAHDIPHIVNNAYGLQ 199 (432)
T ss_pred HhcCCCceeeeccccchHHHHhHHHHHHHHHHhCCceEEEEeecccccCC-CCCchHHHHHHHHHccCchhhhccccccc
Confidence 34788888776 22 2334589999999876566644432211 11 122345677777776 9999999999732
Q ss_pred cCCC-chhhhhcc-CCcEEEEccChhhhcccCcccccccc--CHHHHHHHHHhcC
Q 014492 260 SGLE-SRMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAF--PLSIIEYLWRAKQ 310 (423)
Q Consensus 260 ~~~~-~~~~~~~~-~~~~i~i~S~SK~~g~~G~R~G~i~~--~~~~~~~l~~~~~ 310 (423)
...- ..+..... .....++.|+-|.|..|= -|.+++ +..+++.+.+...
T Consensus 200 see~i~~iaa~~~~grida~vqsldknf~vpv--ggaiia~fk~n~iq~iak~yp 252 (432)
T KOG3843|consen 200 SEECIHKIAAAAECGRIDAFVQSLDKNFMVPV--GGAIIAAFKDNFIQEIAKMYP 252 (432)
T ss_pred hHHHHHHHHHHhhhccHHHHHHHhhhcceeec--chhHhhHhHHHHHHHHHHhCC
Confidence 2100 01111111 222357889999987652 144443 6777777766543
No 396
>PLN02672 methionine S-methyltransferase
Probab=87.41 E-value=7.2 Score=43.36 Aligned_cols=172 Identities=19% Similarity=0.252 Sum_probs=96.8
Q ss_pred CCcchHHHHHHHHHHh----C--CCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCc---hhhHHHHHHCC------
Q 014492 127 PDPESRRLRAALAKDS----G--LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF---TMYEFDAAVNG------ 191 (423)
Q Consensus 127 ~~~g~~~lr~~ia~~~----g--~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y---~~~~~~~~~~g------ 191 (423)
|..|...+|..||.++ + +.+++|++.++-..+++.+++.+ .|-=.++-..-+- .-|.......|
T Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (1082)
T PLN02672 424 PPAGSKRFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRLF-SPRLAIVDEHLTRWLPKKWLTSLAIENATSDSK 502 (1082)
T ss_pred CCccchHHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHhh-ChHHHhhhhhhhccCCHHHHhHhhhhcccccCc
Confidence 4568889999999875 3 57899999999999999998843 3321111000111 11111111111
Q ss_pred ----CeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHc---C-CCEEEEccCC-ccccCC
Q 014492 192 ----AAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE---M-PILVVLDEAY-TEFSGL 262 (423)
Q Consensus 192 ----~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~---~-~~~li~Deay-~~~~~~ 262 (423)
+.|+.-|. . .+.+.+.+++-++++|+..-.. +-..+...++.|.+ . |.+++.|..- .++...
T Consensus 503 ~~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 573 (1082)
T PLN02672 503 SDDVITVIEAPR----Q--SDLVIELIKKLKPQVVVTGMAD---FEMRTSTAFEHLLNVTAEIGARLFLDISDHLELSSL 573 (1082)
T ss_pred cCCeEEEEeCCC----c--chHHHHHHHhCCCeEEEEeccc---hhhhhHHHHHHHHHHHHhhCcEEEEehhhheeeccC
Confidence 22333331 1 1355666666788988865333 22233444444443 3 9999999873 334432
Q ss_pred Cc---hhhhhcc---CCcEEEEccChhhhcccCcccccccc-CHHHHHHHHHh
Q 014492 263 ES---RMEWVKK---HDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRA 308 (423)
Q Consensus 263 ~~---~~~~~~~---~~~~i~i~S~SK~~g~~G~R~G~i~~-~~~~~~~l~~~ 308 (423)
+. ..+.+.. ..+..++.++-|.-=.+-+-+.+++. +..+.+.+.+.
T Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (1082)
T PLN02672 574 PGSNGVLKYLAGHPLPSHAAIICGLVKNQVYSDLEVAFVISENEAVLKALSKT 626 (1082)
T ss_pred CCcccHHHHhcCCCCCcchhHhhhhhhccccccceEEEEecCcHHHHHHHHHH
Confidence 22 2233322 34456666777765457888888887 44555555543
No 397
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=86.95 E-value=12 Score=33.32 Aligned_cols=155 Identities=18% Similarity=0.231 Sum_probs=89.4
Q ss_pred cEEEeCCHHHHHHHHHHHhcCCCCeEE----E--cCC--------CchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHH
Q 014492 148 HILVGCGADELIDLIMRCVLDPGDKIV----D--CPP--------TFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADA 213 (423)
Q Consensus 148 ~i~~t~G~~~al~~~~~~l~~~gd~Vl----~--~~p--------~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~ 213 (423)
-+.+-+|+......+..++ +.|..|. + .++ ........++..|..++.........-..+++.++
T Consensus 3 ~~aL~SGGKDS~~Al~~a~-~~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g~~e~eve~L~~~ 81 (223)
T COG2102 3 VIALYSGGKDSFYALYLAL-EEGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSGEEEREVEELKEA 81 (223)
T ss_pred EEEEEecCcHHHHHHHHHH-HcCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCccchhhHHHHHHH
Confidence 3567778777776666644 4553322 1 122 11234456777899998888654344467888888
Q ss_pred hhcCCceEEEEcCCCCCcCcCCCHHHH---HHHHcC-CCEEEEccCCccccCCCc--hhhhhccCCcEEEEccChhhhcc
Q 014492 214 VEREKPKCIFLTSPNNPDGSIINDEDL---LKILEM-PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVLRTFSKRAGL 287 (423)
Q Consensus 214 i~~~~~~~i~l~~p~NPtG~~~~~~~l---~~i~~~-~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~i~S~SK~~g~ 287 (423)
+..-+...|+ +|.+++..+. +.+|+. |+- +|.+++...+ .....-..+--+.+-+-|| .|+
T Consensus 82 l~~l~~d~iv-------~GaI~s~yqk~rve~lc~~lGl~-----~~~PLWg~d~~ell~e~~~~Gf~~~Iv~Vsa-~gL 148 (223)
T COG2102 82 LRRLKVDGIV-------AGAIASEYQKERVERLCEELGLK-----VYAPLWGRDPEELLEEMVEAGFEAIIVAVSA-EGL 148 (223)
T ss_pred HHhCcccEEE-------EchhhhHHHHHHHHHHHHHhCCE-----EeecccCCCHHHHHHHHHHcCCeEEEEEEec-cCC
Confidence 8765666787 7999887664 556766 774 3555553222 1111112222244444555 455
Q ss_pred cCccccccccCHHHHHHHHHhcCCCCCcHH
Q 014492 288 AGLRVGYGAFPLSIIEYLWRAKQPYNVSVA 317 (423)
Q Consensus 288 ~G~R~G~i~~~~~~~~~l~~~~~~~~~~~~ 317 (423)
+..=+|.- .+.+.++.+......|++++.
T Consensus 149 ~~~~lGr~-i~~~~~e~l~~l~~~ygi~~~ 177 (223)
T COG2102 149 DESWLGRR-IDREFLEELKSLNRRYGIHPA 177 (223)
T ss_pred ChHHhCCc-cCHHHHHHHHHHHHhcCCCcc
Confidence 54334433 367788888777666665543
No 398
>PF08247 ENOD40: ENOD40 protein; InterPro: IPR013186 The soybean early nodulin 40 (ENOD40) mRNA contains two short overlapping ORFs; in vitro translation yields two peptides of 12 and 24 amino acids []. The putative role of the ENOD40 genes has been in favour of organogenesis, such as induction of the cortical cell divisions that lead to initiation of nodule primordia, in developing lateral roots and embryonic tissues. This supports the hypothesis for a role of ENOD40 in lateral organ development [].
Probab=84.03 E-value=0.41 Score=21.22 Aligned_cols=10 Identities=50% Similarity=0.610 Sum_probs=8.0
Q ss_pred ccccccCCCC
Q 014492 12 LCLLKSNFSS 21 (423)
Q Consensus 12 ~~~~~~~~~~ 21 (423)
|||.|+.+-|
T Consensus 3 l~wqksihgs 12 (12)
T PF08247_consen 3 LCWQKSIHGS 12 (12)
T ss_pred eeEeeeecCC
Confidence 7999998753
No 399
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=78.19 E-value=20 Score=33.42 Aligned_cols=84 Identities=17% Similarity=0.154 Sum_probs=52.2
Q ss_pred hcCCCCeEE-EcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHH
Q 014492 166 VLDPGDKIV-DCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL 244 (423)
Q Consensus 166 l~~~gd~Vl-~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~ 244 (423)
|.+.|-.|. +....-.......+..|..++.++...++.-|.+++.+.+.+.++.++++.+. -++.+..+.+.
T Consensus 27 l~~~g~~v~f~~~~~~~~~~~~i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~d~vV~D~y------~~~~~~~~~~k 100 (279)
T TIGR03590 27 LHAQGAEVAFACKPLPGDLIDLLLSAGFPVYELPDESSRYDDALELINLLEEEKFDILIVDHY------GLDADWEKLIK 100 (279)
T ss_pred HHHCCCEEEEEeCCCCHHHHHHHHHcCCeEEEecCCCchhhhHHHHHHHHHhcCCCEEEEcCC------CCCHHHHHHHH
Confidence 334554443 33332223345556788888888754445567888888888678899998776 34555555555
Q ss_pred cC-CCEEEEccC
Q 014492 245 EM-PILVVLDEA 255 (423)
Q Consensus 245 ~~-~~~li~Dea 255 (423)
.. ..++++||-
T Consensus 101 ~~~~~l~~iDD~ 112 (279)
T TIGR03590 101 EFGRKILVIDDL 112 (279)
T ss_pred HhCCeEEEEecC
Confidence 44 355666664
No 400
>PRK08265 short chain dehydrogenase; Provisional
Probab=64.04 E-value=70 Score=29.11 Aligned_cols=97 Identities=16% Similarity=0.107 Sum_probs=51.4
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CCceE
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKC 221 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~ 221 (423)
..+++|.|+...=..+...|.+.|..|++..-.-.......+..+.++..++.|-. |.+.+++.+.+ .++..
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~---~~~~~~~~~~~~~~~~g~id~ 83 (261)
T PRK08265 7 KVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDIT---DDAAIERAVATVVARFGRVDI 83 (261)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCC---CHHHHHHHHHHHHHHhCCCCE
Confidence 45666655544444555567788888876654433333444444656666664432 44555444432 35666
Q ss_pred EEEcCC-CCCcCcCCCHHHHHHHHcC
Q 014492 222 IFLTSP-NNPDGSIINDEDLLKILEM 246 (423)
Q Consensus 222 i~l~~p-~NPtG~~~~~~~l~~i~~~ 246 (423)
++-+.. ..+.+...+.+++.+..+.
T Consensus 84 lv~~ag~~~~~~~~~~~~~~~~~~~~ 109 (261)
T PRK08265 84 LVNLACTYLDDGLASSRADWLAALDV 109 (261)
T ss_pred EEECCCCCCCCcCcCCHHHHHHHHhH
Confidence 665422 2223334566667666654
No 401
>KOG1546 consensus Metacaspase involved in regulation of apoptosis [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=57.19 E-value=1.1e+02 Score=29.02 Aligned_cols=105 Identities=20% Similarity=0.244 Sum_probs=57.9
Q ss_pred HHHHHHHHHHhCCCCCcEEEeCC---------HHHHHHHHHHHh---cCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC
Q 014492 132 RRLRAALAKDSGLESDHILVGCG---------ADELIDLIMRCV---LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR 199 (423)
Q Consensus 132 ~~lr~~ia~~~g~~~~~i~~t~G---------~~~al~~~~~~l---~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~ 199 (423)
...++.|-+.||.+.++|++-.- +-..|..+++.| +++||..++.=..|. .+.-....
T Consensus 88 ~~M~~~Lv~rfGFs~ddI~~LtDt~~s~~~~PT~~Nir~Al~wLV~~aq~gD~LvfHYSGHG----------tr~~~~~g 157 (362)
T KOG1546|consen 88 HRMRKLLVERFGFSEDDILMLTDTDESPVRIPTGKNIRRALRWLVESAQPGDSLVFHYSGHG----------TRQPDTNG 157 (362)
T ss_pred HHHHHHHHHhhCCChhheEEEecCCCcccccCcHHHHHHHHHHHHhcCCCCCEEEEEecCCC----------CcCCCCCC
Confidence 35677777888988888775432 123566666666 467886665433332 22222222
Q ss_pred CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-----CCEEEEccCCcccc
Q 014492 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-----PILVVLDEAYTEFS 260 (423)
Q Consensus 200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-----~~~li~Deay~~~~ 260 (423)
++..+.| ..|+ --=+|-.|.+++.+..+.+++- .+..|+|.+|+...
T Consensus 158 De~dG~D-------------E~I~-P~D~~t~G~iIdDe~~r~lV~plp~G~~lt~I~DSCHSGgl 209 (362)
T KOG1546|consen 158 DEVDGYD-------------ETIV-PCDHNTQGPIIDDEIFRILVRPLPKGCKLTAISDSCHSGGL 209 (362)
T ss_pred CCCCCCc-------------ceee-cccccccccccchHHHHHHHhccCCCceEEEEeecccCCCc
Confidence 2222221 1233 1124556777777777777764 45677777776543
No 402
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=53.18 E-value=1.2e+02 Score=29.99 Aligned_cols=101 Identities=24% Similarity=0.365 Sum_probs=63.4
Q ss_pred HHHhC-CCCCc-EEEeCCHHHHHHHHHHHhcCCC-CeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhh
Q 014492 139 AKDSG-LESDH-ILVGCGADELIDLIMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE 215 (423)
Q Consensus 139 a~~~g-~~~~~-i~~t~G~~~al~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~ 215 (423)
.+.+| ++..+ ++++.|- ...++...|.+.| ..|.+.+-++......++..|++++. ++++...+.
T Consensus 170 ~~~~~~L~~~~vlvIGAGe--m~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~~----------l~el~~~l~ 237 (414)
T COG0373 170 KRIFGSLKDKKVLVIGAGE--MGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAVA----------LEELLEALA 237 (414)
T ss_pred HHHhcccccCeEEEEcccH--HHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeeec----------HHHHHHhhh
Confidence 34455 44443 4455554 4556788888888 78999999999888888888855554 345555554
Q ss_pred cCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccC
Q 014492 216 REKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEA 255 (423)
Q Consensus 216 ~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Dea 255 (423)
...+|+.+ -..| -.+++.+.++...+. .-++++|=+
T Consensus 238 --~~DvViss-Tsa~-~~ii~~~~ve~a~~~r~~~livDia 274 (414)
T COG0373 238 --EADVVISS-TSAP-HPIITREMVERALKIRKRLLIVDIA 274 (414)
T ss_pred --hCCEEEEe-cCCC-ccccCHHHHHHHHhcccCeEEEEec
Confidence 34555544 1111 235667777776664 226777754
No 403
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=52.73 E-value=62 Score=31.12 Aligned_cols=71 Identities=24% Similarity=0.293 Sum_probs=48.5
Q ss_pred CCCeEEEcCCCc-hhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEc-CCCCCcCcCCCHHHHHHHHcC
Q 014492 169 PGDKIVDCPPTF-TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNNPDGSIINDEDLLKILEM 246 (423)
Q Consensus 169 ~gd~Vl~~~p~y-~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~-~p~NPtG~~~~~~~l~~i~~~ 246 (423)
++.+|++.+-.. ....+.+...|+++..||. ..+.+++.+ .+++.|+|+ .|-+|.-.-.-++.+++++..
T Consensus 178 ~~~~Vv~iD~GvK~nIlr~L~~rg~~vtVVP~----~t~~eeIl~----~~pDGiflSNGPGDP~~~~~~i~~ik~l~~~ 249 (368)
T COG0505 178 PGKHVVVIDFGVKRNILRELVKRGCRVTVVPA----DTSAEEILA----LNPDGIFLSNGPGDPAPLDYAIETIKELLGT 249 (368)
T ss_pred CCcEEEEEEcCccHHHHHHHHHCCCeEEEEcC----CCCHHHHHh----hCCCEEEEeCCCCChhHHHHHHHHHHHHhcc
Confidence 345666655444 3555666668999999995 334566544 477889987 889996666666777777765
Q ss_pred C
Q 014492 247 P 247 (423)
Q Consensus 247 ~ 247 (423)
.
T Consensus 250 ~ 250 (368)
T COG0505 250 K 250 (368)
T ss_pred C
Confidence 3
No 404
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=50.95 E-value=65 Score=30.37 Aligned_cols=98 Identities=19% Similarity=0.270 Sum_probs=52.1
Q ss_pred CCCCc-EEEeCCHHHHHHHHHHHhcCCCCeEEEcCC-Cc-hhhHHHHHHCCCeEEEecCCCCCCC-CHHHHHHHhhcCCc
Q 014492 144 LESDH-ILVGCGADELIDLIMRCVLDPGDKIVDCPP-TF-TMYEFDAAVNGAAVVKVPRKSDFSL-NVELIADAVEREKP 219 (423)
Q Consensus 144 ~~~~~-i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p-~y-~~~~~~~~~~g~~~~~v~~~~~~~~-d~~~l~~~i~~~~~ 219 (423)
+.+.. |+=.+++.-++.+++-+-. .|-++++.-| +. .......+.+|++++.+|...++.. -.+.+++... ..+
T Consensus 59 l~pG~tIVE~TSGNTGI~LA~vaa~-~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~~~g~~~~a~~~a~el~~-~~p 136 (300)
T COG0031 59 LKPGGTIVEATSGNTGIALAMVAAA-KGYRLIIVMPETMSQERRKLLRALGAEVILTPGAPGNMKGAIERAKELAA-EIP 136 (300)
T ss_pred CCCCCEEEEcCCChHHHHHHHHHHH-cCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCCCCCchHHHHHHHHHHHH-hCC
Confidence 45554 4434444446666655433 3654443333 44 3666788889999999996333221 1333333443 444
Q ss_pred e-EEEEc---CCCCCcCcCC-CHHHHHHH
Q 014492 220 K-CIFLT---SPNNPDGSII-NDEDLLKI 243 (423)
Q Consensus 220 ~-~i~l~---~p~NPtG~~~-~~~~l~~i 243 (423)
. +++++ ||.||-.... .-.||.+-
T Consensus 137 ~~~~~~~Qf~NpaN~~aH~~tT~~EI~~~ 165 (300)
T COG0031 137 GYAVWLNQFENPANPEAHYETTGPEIWQQ 165 (300)
T ss_pred CceEchhhcCCCccHHHHHhhhHHHHHHH
Confidence 4 77764 6667665442 33344433
No 405
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=50.74 E-value=34 Score=28.35 Aligned_cols=53 Identities=19% Similarity=0.235 Sum_probs=41.1
Q ss_pred CCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHH-HHHHHcC-----CC-EEEEccCCc
Q 014492 205 LNVELIADAVEREKPKCIFLTSPNNPDGSIINDED-LLKILEM-----PI-LVVLDEAYT 257 (423)
Q Consensus 205 ~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~-l~~i~~~-----~~-~li~Deay~ 257 (423)
.|.+.+.+.+.+.++..|++--|.|+.|...+..+ .+++++. ++ .++.||-..
T Consensus 40 ~~~~~l~~li~~~~~~~vVVGlP~~m~g~~~~~~~~~~~f~~~L~~r~~lpv~l~DERlt 99 (141)
T COG0816 40 QDFNALLKLVKEYQVDTVVVGLPLNMDGTEGPRAELARKFAERLKKRFNLPVVLWDERLS 99 (141)
T ss_pred hhHHHHHHHHHHhCCCEEEEecCcCCCCCcchhHHHHHHHHHHHHHhcCCCEEEEcCccC
Confidence 58999999998889999999999999999888553 4555553 54 456787654
No 406
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=49.17 E-value=1.5e+02 Score=28.24 Aligned_cols=96 Identities=14% Similarity=0.090 Sum_probs=49.0
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCC-C-eEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEE
Q 014492 147 DHILVGCGADELIDLIMRCVLDPG-D-KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFL 224 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~g-d-~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l 224 (423)
..|+..+++..+..++..+- ..| + .|+++.-.-..-....+.+|++++.++.+ +.-+..++.+.+.+.++...++
T Consensus 52 ~~vv~aSsGN~g~alA~~a~-~~G~~~~iv~p~~~~~~k~~~l~~~GA~v~~~~~~--~~~~~~~~~~~l~~~~~~~~~~ 128 (316)
T cd06448 52 VHVVCSSGGNAGLAAAYAAR-KLGVPCTIVVPESTKPRVVEKLRDEGATVVVHGKV--WWEADNYLREELAENDPGPVYV 128 (316)
T ss_pred CeEEEeCCcHHHHHHHHHHH-HcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCc--hHHHHHHHHHHHHhccCCcEEe
Confidence 45666666666766665543 234 2 34444433345567778899999998732 1111233344444333355666
Q ss_pred cCCCCCcCcCCCHHHHHHHHc
Q 014492 225 TSPNNPDGSIINDEDLLKILE 245 (423)
Q Consensus 225 ~~p~NPtG~~~~~~~l~~i~~ 245 (423)
..-+||.+.---..--.||.+
T Consensus 129 ~~~~n~~~~~g~~t~~~Ei~~ 149 (316)
T cd06448 129 HPFDDPLIWEGHSSMVDEIAQ 149 (316)
T ss_pred CCCCCchhhccccHHHHHHHH
Confidence 533455543222222344444
No 407
>PF01282 Ribosomal_S24e: Ribosomal protein S24e; InterPro: IPR001976 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This family contains the S24e ribosomal proteins from eukaryotes and archaebacteria. These proteins have 101 to 148 amino acids.; GO: 0003735 structural constituent of ribosome, 0006412 translation, 0005622 intracellular, 0005840 ribosome; PDB: 2V94_B 1YWX_A 2G1D_A 3IZ6_U 1XN9_A 2XZM_P 2XZN_P 3U5G_Y 3J16_D 3IZB_U ....
Probab=49.05 E-value=22 Score=26.57 Aligned_cols=26 Identities=31% Similarity=0.493 Sum_probs=20.9
Q ss_pred CCcchHHHHHHHHHHhCCCCCcEEEe
Q 014492 127 PDPESRRLRAALAKDSGLESDHILVG 152 (423)
Q Consensus 127 ~~~g~~~lr~~ia~~~g~~~~~i~~t 152 (423)
|.+.-.++++.||+.++++++.|++-
T Consensus 11 ~Tpsr~ei~~klA~~~~~~~~~ivv~ 36 (84)
T PF01282_consen 11 PTPSRKEIREKLAAMLNVDPDLIVVF 36 (84)
T ss_dssp SS--HHHHHHHHHHHHTSTGCCEEEE
T ss_pred CCCCHHHHHHHHHHHhCCCCCeEEEe
Confidence 55667899999999999999988864
No 408
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain. Proteins with this uncharacterized domain include two apparent ortholog families in the Archaea, one of which is universal among the first four completed archaeal genomes, and YLR143W, a much longer protein from Saccharomyces cerevisiae. The domain comprises the full length of the archaeal proteins and the first third of the yeast protein.
Probab=49.03 E-value=2e+02 Score=25.86 Aligned_cols=93 Identities=10% Similarity=0.128 Sum_probs=56.8
Q ss_pred EEEeCCHHHHHHHHHHHhcCCCCeEEE----cCC--Cc-------hhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhh
Q 014492 149 ILVGCGADELIDLIMRCVLDPGDKIVD----CPP--TF-------TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE 215 (423)
Q Consensus 149 i~~t~G~~~al~~~~~~l~~~gd~Vl~----~~p--~y-------~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~ 215 (423)
++..+|+......+..+.-+ -+.+.+ +.. .| .....+++..|+.++.++.+....--.+++.+.+.
T Consensus 4 ~~l~SGGKDS~~al~~a~~~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~~~~e~~~e~l~~~l~ 82 (223)
T TIGR00290 4 AALISGGKDSCLALYHALKE-HEVISLVNIMPENEESYMFHGVNAHLTDLQAESIGIPLIKLYTEGTEEDEVEELKGILH 82 (223)
T ss_pred EEEecCcHHHHHHHHHHHHh-CeeEEEEEEecCCCCcccccccCHHHHHHHHHHcCCCeEEeecCCCccHHHHHHHHHHH
Confidence 45677887777777776655 432221 111 11 23446677899998887643332333677777776
Q ss_pred cCCceEEEEcCCCCCcCcCCCHHH---HHHHHcC-CCE
Q 014492 216 REKPKCIFLTSPNNPDGSIINDED---LLKILEM-PIL 249 (423)
Q Consensus 216 ~~~~~~i~l~~p~NPtG~~~~~~~---l~~i~~~-~~~ 249 (423)
+.++..++ +|.+.+... ++.+|+. |+.
T Consensus 83 ~~gv~~vv-------~GdI~s~~qr~~~e~v~~~lgl~ 113 (223)
T TIGR00290 83 TLDVEAVV-------FGAIYSEYQKTRIERVCRELGLK 113 (223)
T ss_pred HcCCCEEE-------ECCcccHHHHHHHHHHHHhcCCE
Confidence 56777777 788887654 4555655 763
No 409
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=48.20 E-value=87 Score=29.43 Aligned_cols=138 Identities=14% Similarity=0.131 Sum_probs=71.1
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCc-h--hhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-CCc
Q 014492 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF-T--MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKP 219 (423)
Q Consensus 144 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y-~--~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~ 219 (423)
+..+-+++|.|+...=..+..-+.+.|-++++.+-.- . .+....+..| ++..+-.|-...-++.++.+.+++ .+.
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis~~eei~~~a~~Vk~e~G~ 114 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDISDREEIYRLAKKVKKEVGD 114 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 3445677777776555555566888887665443322 2 3333334345 666655443323334555555543 223
Q ss_pred eEEEEcCCCCCcC---cCCCHHHHHHHHcCCCEEEEccCCccccCCCchhhh-h-ccCCcEEEEccChhhhcccC
Q 014492 220 KCIFLTSPNNPDG---SIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEW-V-KKHDNLIVLRTFSKRAGLAG 289 (423)
Q Consensus 220 ~~i~l~~p~NPtG---~~~~~~~l~~i~~~~~~li~Deay~~~~~~~~~~~~-~-~~~~~~i~i~S~SK~~g~~G 289 (423)
--|++||..=.+| --.+.+++++..+.|+ .+.|..-....+. . ...+++|.+.|..=-+|.+|
T Consensus 115 V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~-------~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~g 182 (300)
T KOG1201|consen 115 VDILVNNAGIVTGKKLLDCSDEEIQKTFDVNT-------IAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAG 182 (300)
T ss_pred ceEEEeccccccCCCccCCCHHHHHHHHHHhh-------HHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCcc
Confidence 3345566543333 3357888888877644 1222211111111 1 14677888887755566666
No 410
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=47.66 E-value=86 Score=27.94 Aligned_cols=62 Identities=18% Similarity=0.206 Sum_probs=36.7
Q ss_pred HHHHHhcCCCCeE-EEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCC
Q 014492 161 LIMRCVLDPGDKI-VDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNN 229 (423)
Q Consensus 161 ~~~~~l~~~gd~V-l~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~N 229 (423)
.++..|+.++-.| ++..+.-......++..|++++..+. -|.+.|.++++ +...|+++.+.+
T Consensus 13 ~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~-----~~~~~l~~al~--g~d~v~~~~~~~ 75 (233)
T PF05368_consen 13 SVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADY-----DDPESLVAALK--GVDAVFSVTPPS 75 (233)
T ss_dssp HHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-T-----T-HHHHHHHHT--TCSEEEEESSCS
T ss_pred HHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeeccc-----CCHHHHHHHHc--CCceEEeecCcc
Confidence 4555566666444 34444422333445668999887653 27899999996 566677665533
No 411
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=46.87 E-value=2.3e+02 Score=25.93 Aligned_cols=111 Identities=22% Similarity=0.180 Sum_probs=62.4
Q ss_pred HHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhc----------------C-CCCeEEEcCCCch--hhHHHHHHCCCe
Q 014492 133 RLRAALAKDSGLESDHILVGCGADELIDLIMRCVL----------------D-PGDKIVDCPPTFT--MYEFDAAVNGAA 193 (423)
Q Consensus 133 ~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~----------------~-~gd~Vl~~~p~y~--~~~~~~~~~g~~ 193 (423)
.+.+++...-.....+|++|.|+.+.-...-.... + +.+.++...|-|. .-....+.+++.
T Consensus 117 ~~~eA~~~l~~~~~~~iflttGsk~L~~f~~~~~~~~r~~~RvLp~~~~~~g~~~~~iia~~GPfs~e~n~al~~~~~i~ 196 (249)
T PF02571_consen 117 SYEEAAELLKELGGGRIFLTTGSKNLPPFVPAPLPGERLFARVLPTPESALGFPPKNIIAMQGPFSKELNRALFRQYGID 196 (249)
T ss_pred CHHHHHHHHhhcCCCCEEEeCchhhHHHHhhcccCCCEEEEEECCCccccCCCChhhEEEEeCCCCHHHHHHHHHHcCCC
Confidence 34444444434345799999999866544320010 0 1234444444443 333456668888
Q ss_pred EEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcC--CCHHHHHHHHc
Q 014492 194 VVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI--INDEDLLKILE 245 (423)
Q Consensus 194 ~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~--~~~~~l~~i~~ 245 (423)
++--... +..-..+.++.+.. -+..+|+|.-|.-|.|.. -+.+++.+.++
T Consensus 197 ~lVtK~S-G~~g~~eKi~AA~~-lgi~vivI~RP~~~~~~~~~~~~~e~l~~l~ 248 (249)
T PF02571_consen 197 VLVTKES-GGSGFDEKIEAARE-LGIPVIVIKRPPEPYGDPVVETIEELLDWLE 248 (249)
T ss_pred EEEEcCC-CchhhHHHHHHHHH-cCCeEEEEeCCCCCCCCcccCCHHHHHHHHh
Confidence 7776632 22223466666654 688889988887765544 46777665543
No 412
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=46.82 E-value=1.1e+02 Score=27.90 Aligned_cols=95 Identities=16% Similarity=0.160 Sum_probs=58.7
Q ss_pred cEEEeCCHHHHHHHH-HHHhcCCCCeEEEcCCCchhhHHHHHHCC-CeEEEecCCCCCCCCHHHHHHHhhc-----CCce
Q 014492 148 HILVGCGADELIDLI-MRCVLDPGDKIVDCPPTFTMYEFDAAVNG-AAVVKVPRKSDFSLNVELIADAVER-----EKPK 220 (423)
Q Consensus 148 ~i~~t~G~~~al~~~-~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g-~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~ 220 (423)
.|++.+|+++++..+ .+.|.+.|-+|++..---......+...+ .++..+.+| .-|.+.+++.+.. .++.
T Consensus 7 kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~D---VtD~~~~~~~i~~~~~~~g~iD 83 (246)
T COG4221 7 KVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALD---VTDRAAVEAAIEALPEEFGRID 83 (246)
T ss_pred cEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeec---cCCHHHHHHHHHHHHHhhCccc
Confidence 567777888888554 55678899888887766667777777777 455555544 2355555544431 3566
Q ss_pred EEEEcCCCCCcCcC---CCHHHHHHHHcC
Q 014492 221 CIFLTSPNNPDGSI---INDEDLLKILEM 246 (423)
Q Consensus 221 ~i~l~~p~NPtG~~---~~~~~l~~i~~~ 246 (423)
+++ +|..-.-|.. .+.+++....+.
T Consensus 84 iLv-NNAGl~~g~~~~~~~~~dw~~Mid~ 111 (246)
T COG4221 84 ILV-NNAGLALGDPLDEADLDDWDRMIDT 111 (246)
T ss_pred EEE-ecCCCCcCChhhhCCHHHHHHHHHH
Confidence 666 4443333333 355666666665
No 413
>PRK06500 short chain dehydrogenase; Provisional
Probab=46.13 E-value=2e+02 Score=25.55 Aligned_cols=100 Identities=11% Similarity=0.077 Sum_probs=48.8
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc--CCceEEEE
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER--EKPKCIFL 224 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~--~~~~~i~l 224 (423)
..+++|.++...=..+.+.+.+.|..|++....-.......+..|.++..+..|....-+.+.+.+.+.+ .++..++-
T Consensus 7 k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 86 (249)
T PRK06500 7 KTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAVFI 86 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEE
Confidence 3566665555444556666778887777654433333333344566666666442211123333333321 35677775
Q ss_pred cCCCCCcC--cCCCHHHHHHHHcC
Q 014492 225 TSPNNPDG--SIINDEDLLKILEM 246 (423)
Q Consensus 225 ~~p~NPtG--~~~~~~~l~~i~~~ 246 (423)
+......+ .-.+.+++.+..+.
T Consensus 87 ~ag~~~~~~~~~~~~~~~~~~~~~ 110 (249)
T PRK06500 87 NAGVAKFAPLEDWDEAMFDRSFNT 110 (249)
T ss_pred CCCCCCCCChhhCCHHHHHHHHHH
Confidence 53221112 12355666655553
No 414
>PF13552 DUF4127: Protein of unknown function (DUF4127)
Probab=45.29 E-value=3.6e+02 Score=27.63 Aligned_cols=24 Identities=38% Similarity=0.492 Sum_probs=18.2
Q ss_pred hCCCCCcEEEeCCHHHHHHHHHHHh
Q 014492 142 SGLESDHILVGCGADELIDLIMRCV 166 (423)
Q Consensus 142 ~g~~~~~i~~t~G~~~al~~~~~~l 166 (423)
+++ .+.+.+.+|+.|.-..++.-.
T Consensus 224 ~~l-~~rv~i~pGADEvg~~LlaRa 247 (497)
T PF13552_consen 224 LGL-SDRVMIYPGADEVGLLLLARA 247 (497)
T ss_pred cCC-CCceeeeCChhHHHHHHHHHH
Confidence 455 789999999999866655544
No 415
>COG0514 RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair]
Probab=45.22 E-value=78 Score=32.89 Aligned_cols=103 Identities=16% Similarity=0.200 Sum_probs=62.3
Q ss_pred cEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHH---HHHHCCCeEEEecCCCCCCCC---HHHHHHHhhcCCceE
Q 014492 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF---DAAVNGAAVVKVPRKSDFSLN---VELIADAVEREKPKC 221 (423)
Q Consensus 148 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~d---~~~l~~~i~~~~~~~ 221 (423)
.|+.|.|+.++...+-. ++.+|- .++.+|--..... .++..|+++..+.. .++ ...+...+.....++
T Consensus 37 vvmPTGgGKSlCyQiPA-ll~~G~-TLVVSPLiSLM~DQV~~l~~~Gi~A~~lnS----~l~~~e~~~v~~~l~~g~~kl 110 (590)
T COG0514 37 VVMPTGGGKSLCYQIPA-LLLEGL-TLVVSPLISLMKDQVDQLEAAGIRAAYLNS----TLSREERQQVLNQLKSGQLKL 110 (590)
T ss_pred EEccCCCCcchHhhhHH-HhcCCC-EEEECchHHHHHHHHHHHHHcCceeehhhc----ccCHHHHHHHHHHHhcCceeE
Confidence 56678899988877776 556775 4455666654333 34457877666652 333 344555555567899
Q ss_pred EEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccC
Q 014492 222 IFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSG 261 (423)
Q Consensus 222 i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~ 261 (423)
+|++ |- ...+..-++.|.+. -.++++||||.-..+
T Consensus 111 Lyis-PE----rl~~~~f~~~L~~~~i~l~vIDEAHCiSqW 146 (590)
T COG0514 111 LYIS-PE----RLMSPRFLELLKRLPISLVAIDEAHCISQW 146 (590)
T ss_pred EEEC-ch----hhcChHHHHHHHhCCCceEEechHHHHhhc
Confidence 9975 31 11222344445544 568999999964433
No 416
>PRK09189 uroporphyrinogen-III synthase; Validated
Probab=44.58 E-value=1.7e+02 Score=26.37 Aligned_cols=85 Identities=13% Similarity=0.142 Sum_probs=50.4
Q ss_pred hCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCch--hhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcC
Q 014492 142 SGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVERE 217 (423)
Q Consensus 142 ~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~--~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~ 217 (423)
+|+. .++...+..+++...+..-..+|.+|++....-. ......+..|+++..++.- ..-..+.+.+.+.+.+.
T Consensus 92 ~G~~--~~~~~~~~~e~L~~~~~~~~~~~~~vL~~rg~~~r~~l~~~L~~~G~~v~~~~vY~~~~~~~~~~~~~~~l~~~ 169 (240)
T PRK09189 92 LGFR--HVIEGGGDGVRLAETVAAALAPTARLLYLAGRPRAPVFEDRLAAAGIPFRVAECYDMLPVMYSPATLSAILGGA 169 (240)
T ss_pred cCCC--CCcCCCCCHHHHHHHHHHhcCCCCcEEEeccCcccchhHHHHHhCCCeeEEEEEEEeecCCCChHHHHHHHhcC
Confidence 4654 2344456666665444433346778887766543 4555666788887766621 11123456677777656
Q ss_pred CceEEEEcCCC
Q 014492 218 KPKCIFLTSPN 228 (423)
Q Consensus 218 ~~~~i~l~~p~ 228 (423)
++..|++.+|.
T Consensus 170 ~~d~i~f~S~~ 180 (240)
T PRK09189 170 PFDAVLLYSRV 180 (240)
T ss_pred CCCEEEEeCHH
Confidence 78888877765
No 417
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=44.08 E-value=2.6e+02 Score=25.80 Aligned_cols=55 Identities=13% Similarity=0.157 Sum_probs=29.2
Q ss_pred HHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC
Q 014492 184 EFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM 246 (423)
Q Consensus 184 ~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~ 246 (423)
...+...|+.-+.+|...- -..+.+.+.+++.+.+.+.+.+|+. +.++++.|++.
T Consensus 112 ~~~~~~aGvdgviipDLP~--ee~~~~~~~~~~~gi~~I~lv~PtT------~~eri~~i~~~ 166 (263)
T CHL00200 112 IKKISQAGVKGLIIPDLPY--EESDYLISVCNLYNIELILLIAPTS------SKSRIQKIARA 166 (263)
T ss_pred HHHHHHcCCeEEEecCCCH--HHHHHHHHHHHHcCCCEEEEECCCC------CHHHHHHHHHh
Confidence 3344456666666662110 1134444555555666666666664 25666666665
No 418
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=44.04 E-value=92 Score=27.93 Aligned_cols=67 Identities=16% Similarity=0.187 Sum_probs=43.9
Q ss_pred CcEEEeCCHHHHHHHHHHHh--cCCCCeEEEcCCCchhhHH-----HHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCc
Q 014492 147 DHILVGCGADELIDLIMRCV--LDPGDKIVDCPPTFTMYEF-----DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKP 219 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l--~~~gd~Vl~~~p~y~~~~~-----~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~ 219 (423)
--|++|+|.+.......... +.++|.++ ..|-|+.+.. ..-..|+.++.++ .+|++.+.+.+++.++
T Consensus 153 a~l~yTsg~~~~~~~~~~~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~~-----rFd~~~~l~~i~~~~v 226 (227)
T TIGR03089 153 ALVAGGGEWTGAELVAAARAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLVT-----HPDPARLDQIAETERV 226 (227)
T ss_pred eeeeccccccHHHHHHHHhhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEec-----CCCHHHHHHHHHhhcC
Confidence 35677887765543332222 46789999 8888874443 2223689988875 5688999998876554
No 419
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=43.84 E-value=1.1e+02 Score=29.99 Aligned_cols=83 Identities=16% Similarity=0.117 Sum_probs=46.9
Q ss_pred cEEEeCCHHHHHHHHHHHhcCCCC--eEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEc
Q 014492 148 HILVGCGADELIDLIMRCVLDPGD--KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT 225 (423)
Q Consensus 148 ~i~~t~G~~~al~~~~~~l~~~gd--~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~ 225 (423)
.|+-.+++..++.++..+- ..|- .|+++.-.-..-....+.+|++++.++...+..-..+..++..+ .++..++++
T Consensus 113 ~vV~aSsGN~G~alA~~a~-~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~~~~~~~~~~~a~~l~~-~~~~~~~~~ 190 (368)
T PLN02556 113 TLIEPTSGNMGISLAFMAA-MKGYKMILTMPSYTSLERRVTMRAFGAELVLTDPTKGMGGTVKKAYELLE-STPDAFMLQ 190 (368)
T ss_pred EEEEeCCchHHHHHHHHHH-HcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCCCCccHHHHHHHHHHH-hcCCCCccC
Confidence 4666777777777766643 2353 34444433345566778899999998742222223344444443 345566655
Q ss_pred CCCCCcC
Q 014492 226 SPNNPDG 232 (423)
Q Consensus 226 ~p~NPtG 232 (423)
..+||.+
T Consensus 191 q~~np~~ 197 (368)
T PLN02556 191 QFSNPAN 197 (368)
T ss_pred CCCCHHH
Confidence 4456644
No 420
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=43.18 E-value=2e+02 Score=25.91 Aligned_cols=108 Identities=14% Similarity=0.031 Sum_probs=53.4
Q ss_pred HHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCch--hhHHHHHHCCCeEEEecCCCCCCCCHHHHHHH
Q 014492 136 AALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRKSDFSLNVELIADA 213 (423)
Q Consensus 136 ~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~--~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~ 213 (423)
+....++......+++|.|+...=..+.+.|.+.|..|++..-.-. .........+.++..++.|-. |.+.+++.
T Consensus 5 ~~~~~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~---~~~~i~~~ 81 (258)
T PRK06935 5 KFSMDFFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVTFVQVDLT---KPESAEKV 81 (258)
T ss_pred hhccccccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCC---CHHHHHHH
Confidence 3444455555556777766655445566667788987765543321 111222234556655654322 34444444
Q ss_pred hhc-----CCceEEEEcCC-CCCcC-cCCCHHHHHHHHcC
Q 014492 214 VER-----EKPKCIFLTSP-NNPDG-SIINDEDLLKILEM 246 (423)
Q Consensus 214 i~~-----~~~~~i~l~~p-~NPtG-~~~~~~~l~~i~~~ 246 (423)
+.+ .+++.++.+.. ..+.- ...+.+++++..+.
T Consensus 82 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~ 121 (258)
T PRK06935 82 VKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDI 121 (258)
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 431 25677775522 22111 12345566655553
No 421
>PLN02591 tryptophan synthase
Probab=42.16 E-value=2.8e+02 Score=25.47 Aligned_cols=72 Identities=21% Similarity=0.266 Sum_probs=41.2
Q ss_pred HHHHHHHHhcCCC-CeEEEcCCCch---hhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCc
Q 014492 158 LIDLIMRCVLDPG-DKIVDCPPTFT---MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS 233 (423)
Q Consensus 158 al~~~~~~l~~~g-d~Vl~~~p~y~---~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~ 233 (423)
+++..+..+.+.| |.|++++--+. .+...++.+|...+.+-.+ ..+.+.+++... .....||+.+-...||.
T Consensus 94 G~~~F~~~~~~aGv~GviipDLP~ee~~~~~~~~~~~gl~~I~lv~P---tt~~~ri~~ia~-~~~gFIY~Vs~~GvTG~ 169 (250)
T PLN02591 94 GIDKFMATIKEAGVHGLVVPDLPLEETEALRAEAAKNGIELVLLTTP---TTPTERMKAIAE-ASEGFVYLVSSTGVTGA 169 (250)
T ss_pred HHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeCC---CCCHHHHHHHHH-hCCCcEEEeeCCCCcCC
Confidence 4455555555555 77777776653 4455566677776665421 223445555444 45566776665666775
No 422
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=42.15 E-value=93 Score=28.52 Aligned_cols=67 Identities=22% Similarity=0.166 Sum_probs=42.3
Q ss_pred cEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHH---CCCeEEEecCCCCCCC-CHHHHHHHhhcCCceEEE
Q 014492 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV---NGAAVVKVPRKSDFSL-NVELIADAVEREKPKCIF 223 (423)
Q Consensus 148 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~---~g~~~~~v~~~~~~~~-d~~~l~~~i~~~~~~~i~ 223 (423)
+|++-.|++++-.++-. |.+.|. |++.- ...|...... .+.+++. +.+ |.++|++.+.++++++|+
T Consensus 2 ~ILvlgGTtE~r~la~~-L~~~g~-v~~sv--~t~~g~~~~~~~~~~~~v~~------G~lg~~~~l~~~l~~~~i~~vI 71 (249)
T PF02571_consen 2 KILVLGGTTEGRKLAER-LAEAGY-VIVSV--ATSYGGELLKPELPGLEVRV------GRLGDEEGLAEFLRENGIDAVI 71 (249)
T ss_pred EEEEEechHHHHHHHHH-HHhcCC-EEEEE--EhhhhHhhhccccCCceEEE------CCCCCHHHHHHHHHhCCCcEEE
Confidence 58899999999876665 777777 54332 2222222211 1222221 356 899999999888898888
Q ss_pred E
Q 014492 224 L 224 (423)
Q Consensus 224 l 224 (423)
=
T Consensus 72 D 72 (249)
T PF02571_consen 72 D 72 (249)
T ss_pred E
Confidence 3
No 423
>PRK08589 short chain dehydrogenase; Validated
Probab=41.34 E-value=2.3e+02 Score=25.87 Aligned_cols=96 Identities=9% Similarity=0.077 Sum_probs=47.7
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHH---HHCCCeEEEecCCCCCCCCHHHHHHHhh---c--CC
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVE---R--EK 218 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~d~~~l~~~i~---~--~~ 218 (423)
..+++|.|+...=..+...|.+.|..|++.... ....... +..+.++..+..|-. |.+.+++.+. + .+
T Consensus 7 k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~---~~~~~~~~~~~~~~~~g~ 82 (272)
T PRK08589 7 KVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDIS---DEQQVKDFASEIKEQFGR 82 (272)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecC---CHHHHHHHHHHHHHHcCC
Confidence 355665555443344555678889888776554 3322222 223556666654422 3444443332 1 34
Q ss_pred ceEEEEcCCC-CCcCc--CCCHHHHHHHHcC
Q 014492 219 PKCIFLTSPN-NPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 219 ~~~i~l~~p~-NPtG~--~~~~~~l~~i~~~ 246 (423)
+..++-+... .+.+. ..+.+++.+..+.
T Consensus 83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~ 113 (272)
T PRK08589 83 VDVLFNNAGVDNAAGRIHEYPVDVFDKIMAV 113 (272)
T ss_pred cCEEEECCCCCCCCCCcccCCHHHHHHHHHH
Confidence 6666655222 22222 2355666665553
No 424
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=40.61 E-value=1.7e+02 Score=23.16 Aligned_cols=17 Identities=18% Similarity=0.384 Sum_probs=9.1
Q ss_pred cEEEeCCHHHHHHHHHH
Q 014492 148 HILVGCGADELIDLIMR 164 (423)
Q Consensus 148 ~i~~t~G~~~al~~~~~ 164 (423)
-++++.|.+..+..-++
T Consensus 16 i~i~g~g~s~~~a~~~~ 32 (139)
T cd05013 16 IYIFGVGSSGLVAEYLA 32 (139)
T ss_pred EEEEEcCchHHHHHHHH
Confidence 34556666655544443
No 425
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=40.05 E-value=3.1e+02 Score=25.41 Aligned_cols=131 Identities=24% Similarity=0.275 Sum_probs=0.0
Q ss_pred hHHHHHHCCCeEEEec-CCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC--CCEEEEccCCccc
Q 014492 183 YEFDAAVNGAAVVKVP-RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM--PILVVLDEAYTEF 259 (423)
Q Consensus 183 ~~~~~~~~g~~~~~v~-~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~--~~~li~Deay~~~ 259 (423)
+...++..|+.-+-+| ++.+.. +.+.....+...+.|+++.|+.| .+.++++++. |.
T Consensus 114 F~~~~~~~GvdGlivpDLP~ee~---~~~~~~~~~~gi~~I~lvaPtt~------~~rl~~i~~~a~GF----------- 173 (265)
T COG0159 114 FLRRAKEAGVDGLLVPDLPPEES---DELLKAAEKHGIDPIFLVAPTTP------DERLKKIAEAASGF----------- 173 (265)
T ss_pred HHHHHHHcCCCEEEeCCCChHHH---HHHHHHHHHcCCcEEEEeCCCCC------HHHHHHHHHhCCCc-----------
Q ss_pred cCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC-----CCCcHHHHHHHHHHhCCh-----
Q 014492 260 SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP-----YNVSVAAEVAACAALQNP----- 329 (423)
Q Consensus 260 ~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~-----~~~~~~~~~a~~~~l~~~----- 329 (423)
+|..|. .|..|.|......-++.++++++.... |+++...+........+.
T Consensus 174 ----------------iY~vs~---~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~vGFGIs~~e~~~~v~~~ADGVIVGS 234 (265)
T COG0159 174 ----------------IYYVSR---MGVTGARNPVSADVKELVKRVRKYTDVPVLVGFGISSPEQAAQVAEAADGVIVGS 234 (265)
T ss_pred ----------------EEEEec---ccccCCCcccchhHHHHHHHHHHhcCCCeEEecCcCCHHHHHHHHHhCCeEEEcH
Q ss_pred ---HHHHH-----HHHHHHHHHHHHHHHHcc
Q 014492 330 ---IYLEK-----VKEALIKERERLFKLLKD 352 (423)
Q Consensus 330 ---~~~~~-----~~~~~~~~~~~l~~~L~~ 352 (423)
+.+++ ..+.+++..+.+.+.+++
T Consensus 235 AiV~~i~~~~~~~~~~~~~~l~~~l~~~~~~ 265 (265)
T COG0159 235 AIVKIIEEGLDEEALEELRALVKELKAALRE 265 (265)
T ss_pred HHHHHHHhccchhhHHHHHHHHHHHHHHhcC
No 426
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=39.30 E-value=3.2e+02 Score=25.35 Aligned_cols=100 Identities=12% Similarity=0.089 Sum_probs=57.0
Q ss_pred EEEeCCHHHHHHHHH-HHhcCCCCeEEEcCCCchhhH----HHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcC--CceE
Q 014492 149 ILVGCGADELIDLIM-RCVLDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPRKSDFSLNVELIADAVERE--KPKC 221 (423)
Q Consensus 149 i~~t~G~~~al~~~~-~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~--~~~~ 221 (423)
-++.+|++.+|...+ ..|.+.|..+++..-.-.... ......|.++..++.|-...-+++.+...+.+. .+.+
T Consensus 8 ~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~~Idv 87 (265)
T COG0300 8 TALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGGPIDV 87 (265)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCCcccE
Confidence 345566667776554 446788877776655554333 333346778877776544344566666666543 4555
Q ss_pred EEEcCCCCCcC--cCCCHHHHHHHHcCCC
Q 014492 222 IFLTSPNNPDG--SIINDEDLLKILEMPI 248 (423)
Q Consensus 222 i~l~~p~NPtG--~~~~~~~l~~i~~~~~ 248 (423)
++=|--..-.| .-.+.++.+++.+.|+
T Consensus 88 LVNNAG~g~~g~f~~~~~~~~~~mi~lN~ 116 (265)
T COG0300 88 LVNNAGFGTFGPFLELSLDEEEEMIQLNI 116 (265)
T ss_pred EEECCCcCCccchhhCChHHHHHHHHHHH
Confidence 55332233344 3346667777666543
No 427
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=38.19 E-value=1.3e+02 Score=27.62 Aligned_cols=71 Identities=21% Similarity=0.079 Sum_probs=45.7
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCC-CchhhHHHHHHCCCeEEEecCCCCCCC-CHHHHHHHhhcCCceEEEE
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPP-TFTMYEFDAAVNGAAVVKVPRKSDFSL-NVELIADAVEREKPKCIFL 224 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p-~y~~~~~~~~~~g~~~~~v~~~~~~~~-d~~~l~~~i~~~~~~~i~l 224 (423)
..|++-.|++++-.++-. |.+.|..|++..- .|.. ....+..++. +.+ |.+.+++.+.++++++|+=
T Consensus 3 ~~IlvlgGT~egr~la~~-L~~~g~~v~~Svat~~g~----~~~~~~~v~~------G~l~~~~~l~~~l~~~~i~~VID 71 (248)
T PRK08057 3 PRILLLGGTSEARALARA-LAAAGVDIVLSLAGRTGG----PADLPGPVRV------GGFGGAEGLAAYLREEGIDLVID 71 (248)
T ss_pred ceEEEEechHHHHHHHHH-HHhCCCeEEEEEccCCCC----cccCCceEEE------CCCCCHHHHHHHHHHCCCCEEEE
Confidence 468999999999876654 6566766654333 3333 1222333322 367 8999999998889998883
Q ss_pred -cCCC
Q 014492 225 -TSPN 228 (423)
Q Consensus 225 -~~p~ 228 (423)
+||.
T Consensus 72 ATHPf 76 (248)
T PRK08057 72 ATHPY 76 (248)
T ss_pred CCCcc
Confidence 2543
No 428
>PF05127 Helicase_RecD: Helicase; InterPro: IPR007807 This domain is about 350 amino acid residues long and appears to have a P-loop motif, suggesting this is an ATPase. This domain is often N-terminal to a GCN5-related N-acetyltransferase domain IPR000182 from INTERPRO and C-terminal to IPR013562 from INTERPRO.; PDB: 2ZPA_B.
Probab=37.54 E-value=17 Score=31.37 Aligned_cols=117 Identities=13% Similarity=0.118 Sum_probs=47.4
Q ss_pred CCHHHHHHHHHHHhcCCCC-eEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCc
Q 014492 153 CGADELIDLIMRCVLDPGD-KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPD 231 (423)
Q Consensus 153 ~G~~~al~~~~~~l~~~gd-~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPt 231 (423)
.|=+.++.+++..+...|. .|++..|.........+........+..+. +.. ........ ...++.+
T Consensus 8 RGKSa~lGl~~a~l~~~~~~~I~vtAP~~~~~~~lf~~~~~~l~~~~~~~---------~~~--~~~~~~~~-~~~~~~~ 75 (177)
T PF05127_consen 8 RGKSAALGLAAAALIQKGKIRILVTAPSPENVQTLFEFAEKGLKALGYKE---------EKK--KRIGQIIK-LRFNKQR 75 (177)
T ss_dssp SSHHHHHHHCCCCSSS-----EEEE-SS--S-HHHHHCC--------------------------------------CCC
T ss_pred CCHHHHHHHHHHHHHHhcCceEEEecCCHHHHHHHHHHHHhhcccccccc---------ccc--cccccccc-cccccce
Confidence 4677788888887777764 799999999887777766543333322111 000 00111111 1122333
Q ss_pred CcCCCHHHHHHHHcCCCEEEEccCCccccCCCchhhhhccCCcEEEEccChh
Q 014492 232 GSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSK 283 (423)
Q Consensus 232 G~~~~~~~l~~i~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK 283 (423)
=..++.+++.......-++|+||+=+--. +.....+..+.++++..|.+-
T Consensus 76 i~f~~Pd~l~~~~~~~DlliVDEAAaIp~--p~L~~ll~~~~~vv~stTi~G 125 (177)
T PF05127_consen 76 IEFVAPDELLAEKPQADLLIVDEAAAIPL--PLLKQLLRRFPRVVFSTTIHG 125 (177)
T ss_dssp --B--HHHHCCT----SCEEECTGGGS-H--HHHHHHHCCSSEEEEEEEBSS
T ss_pred EEEECCHHHHhCcCCCCEEEEechhcCCH--HHHHHHHhhCCEEEEEeeccc
Confidence 34456666654443345799999855110 011223345677776655543
No 429
>COG1197 Mfd Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription]
Probab=37.41 E-value=6.7e+02 Score=28.53 Aligned_cols=168 Identities=17% Similarity=0.191 Sum_probs=89.9
Q ss_pred CCCCCcEEE---eCCHHH-HHHHHHHHhcCCCCeEEEcCCCch----hhHHHHHH---CCCeEEEecCCCCCCC--CHHH
Q 014492 143 GLESDHILV---GCGADE-LIDLIMRCVLDPGDKIVDCPPTFT----MYEFDAAV---NGAAVVKVPRKSDFSL--NVEL 209 (423)
Q Consensus 143 g~~~~~i~~---t~G~~~-al~~~~~~l~~~gd~Vl~~~p~y~----~~~~~~~~---~g~~~~~v~~~~~~~~--d~~~ 209 (423)
+...|+++. +-|=|| |+.+++.++. .|..|.+..|+=- -|....+. +++++-.+. .|.- ...+
T Consensus 613 ~kpMDRLiCGDVGFGKTEVAmRAAFkAV~-~GKQVAvLVPTTlLA~QHy~tFkeRF~~fPV~I~~LS---RF~s~kE~~~ 688 (1139)
T COG1197 613 GKPMDRLICGDVGFGKTEVAMRAAFKAVM-DGKQVAVLVPTTLLAQQHYETFKERFAGFPVRIEVLS---RFRSAKEQKE 688 (1139)
T ss_pred CCcchheeecCcCCcHHHHHHHHHHHHhc-CCCeEEEEcccHHhHHHHHHHHHHHhcCCCeeEEEec---ccCCHHHHHH
Confidence 345577764 345555 3455555443 4666776667653 22222222 233333332 2221 1233
Q ss_pred HHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHc----C-C-CEEEEccCCccccCCCchhhhhccCCcEEEEccC--
Q 014492 210 IADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE----M-P-ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF-- 281 (423)
Q Consensus 210 l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~----~-~-~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~-- 281 (423)
+.+.+.+.++.+||=+| +|.. + + .++|+||=+...+.....++.+...-+++.+...
T Consensus 689 il~~la~G~vDIvIGTH---------------rLL~kdv~FkdLGLlIIDEEqRFGVk~KEkLK~Lr~~VDvLTLSATPI 753 (1139)
T COG1197 689 ILKGLAEGKVDIVIGTH---------------RLLSKDVKFKDLGLLIIDEEQRFGVKHKEKLKELRANVDVLTLSATPI 753 (1139)
T ss_pred HHHHHhcCCccEEEech---------------HhhCCCcEEecCCeEEEechhhcCccHHHHHHHHhccCcEEEeeCCCC
Confidence 44445556777777332 2222 1 2 4789999998777655556655443333333111
Q ss_pred --hhhhcccCcc-ccccccCHHHHHHHHHhcCCCCCcHHHHHHHHHHhCCh
Q 014492 282 --SKRAGLAGLR-VGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNP 329 (423)
Q Consensus 282 --SK~~g~~G~R-~G~i~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~ 329 (423)
+=.++|.|+| +..+..||.-.-.+..+..+++...+-.+......+.+
T Consensus 754 PRTL~Msm~GiRdlSvI~TPP~~R~pV~T~V~~~d~~~ireAI~REl~RgG 804 (1139)
T COG1197 754 PRTLNMSLSGIRDLSVIATPPEDRLPVKTFVSEYDDLLIREAILRELLRGG 804 (1139)
T ss_pred cchHHHHHhcchhhhhccCCCCCCcceEEEEecCChHHHHHHHHHHHhcCC
Confidence 1135678988 78888888765555555556666666666666666653
No 430
>PLN03013 cysteine synthase
Probab=36.81 E-value=1.8e+02 Score=29.07 Aligned_cols=81 Identities=14% Similarity=0.099 Sum_probs=44.9
Q ss_pred cEEEeCCHHHHHHHHHHHhcCCC--CeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEc
Q 014492 148 HILVGCGADELIDLIMRCVLDPG--DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT 225 (423)
Q Consensus 148 ~i~~t~G~~~al~~~~~~l~~~g--d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~ 225 (423)
.|+-.+++..++.++..+-. .| -.|+++.-.-..-....+.+|++++.++.+.++.-..+..++... .....++++
T Consensus 177 ~VVeaSSGN~G~ALA~~a~~-~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v~~~~~~~~a~~~A~ela~-~~~g~~~~~ 254 (429)
T PLN03013 177 VLVEPTSGNTGIGLAFIAAS-RGYRLILTMPASMSMERRVLLKAFGAELVLTDPAKGMTGAVQKAEEILK-NTPDAYMLQ 254 (429)
T ss_pred EEEEECCcHHHHHHHHHHHH-cCCCEEEEECCCCcHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHh-hcCCeEeCC
Confidence 36666677777776665432 34 344455555556677888899999999743221111233333333 233455544
Q ss_pred CCCCC
Q 014492 226 SPNNP 230 (423)
Q Consensus 226 ~p~NP 230 (423)
.-+||
T Consensus 255 qy~Np 259 (429)
T PLN03013 255 QFDNP 259 (429)
T ss_pred CCCCH
Confidence 33465
No 431
>PRK05928 hemD uroporphyrinogen-III synthase; Reviewed
Probab=36.37 E-value=1.8e+02 Score=25.97 Aligned_cols=87 Identities=14% Similarity=0.077 Sum_probs=45.9
Q ss_pred hCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCch--hhHHHHHHCCCeEEEecCCCC--CCCCHHHHHHHhhcC
Q 014492 142 SGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRKSD--FSLNVELIADAVERE 217 (423)
Q Consensus 142 ~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~--~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~ 217 (423)
+|+.+.. +...+..+.+...+......|.+|++..+.-. ......+..|+++..++.-.. ...+.+.....+...
T Consensus 98 ~G~~~~~-~~~~~~~~~l~~~l~~~~~~~~~ili~~~~~~~~~l~~~L~~~G~~v~~~~~Y~~~~~~~~~~~~~~~~~~~ 176 (249)
T PRK05928 98 LGGKVVF-VPEDGESSELLLELPELLLKGKRVLYLRGNGGREVLGDTLEERGAEVDECEVYERVPPKLDGAELLARLQSG 176 (249)
T ss_pred cCCCccc-cCCCCcChHHHHhChhhhcCCCEEEEECCCCCHHHHHHHHHHCCCEEeEEEEEEeeCCCCChHHHHHHHHhC
Confidence 5654332 22333334333333222235788888877664 455566678999888873111 111233333333235
Q ss_pred CceEEEEcCCCC
Q 014492 218 KPKCIFLTSPNN 229 (423)
Q Consensus 218 ~~~~i~l~~p~N 229 (423)
+..+|++++|+.
T Consensus 177 ~~d~ivftS~~~ 188 (249)
T PRK05928 177 EVDAVIFTSPST 188 (249)
T ss_pred CCCEEEECCHHH
Confidence 778888877654
No 432
>PRK05872 short chain dehydrogenase; Provisional
Probab=36.29 E-value=3.6e+02 Score=25.04 Aligned_cols=98 Identities=13% Similarity=0.121 Sum_probs=50.8
Q ss_pred CCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHC--CCeEEEecCCCCCCCCHHHHHHHhhc-----CC
Q 014492 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVN--GAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (423)
Q Consensus 146 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~--g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~ 218 (423)
...+++|.|+...=..+...+.+.|..|++..-.-.......+.. +.++..+..| --|.+++++.+.+ .+
T Consensus 9 gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~D---v~d~~~v~~~~~~~~~~~g~ 85 (296)
T PRK05872 9 GKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVAD---VTDLAAMQAAAEEAVERFGG 85 (296)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEec---CCCHHHHHHHHHHHHHHcCC
Confidence 346666666554444555567788888877655444333333333 3455555443 2245555554432 35
Q ss_pred ceEEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 219 PKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 219 ~~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
+..++.+......+. ..+.+++++..+.
T Consensus 86 id~vI~nAG~~~~~~~~~~~~~~~~~~~~v 115 (296)
T PRK05872 86 IDVVVANAGIASGGSVAQVDPDAFRRVIDV 115 (296)
T ss_pred CCEEEECCCcCCCcCcccCCHHHHHHHHHH
Confidence 677775532222222 2355666665553
No 433
>PRK10892 D-arabinose 5-phosphate isomerase; Provisional
Probab=36.24 E-value=2.4e+02 Score=26.77 Aligned_cols=99 Identities=16% Similarity=0.102 Sum_probs=45.3
Q ss_pred HHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHH-HhcCCCCeEEEcCCCchhhHHHHHH-CCCeEEEecCCCCCCCCHHHH
Q 014492 133 RLRAALAKDSGLESDHILVGCGADELIDLIMR-CVLDPGDKIVDCPPTFTMYEFDAAV-NGAAVVKVPRKSDFSLNVELI 210 (423)
Q Consensus 133 ~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~-~l~~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~~v~~~~~~~~d~~~l 210 (423)
++.+++.........=++++.|++..+..-++ .|..-|..+....+.+..+...... .+--++.+.. .+..-++-+.
T Consensus 35 ~l~~~~~~l~~a~~~I~i~G~G~S~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~d~~I~iS~-sG~t~~~~~~ 113 (326)
T PRK10892 35 DFTLACEKMFWCKGKVVVMGMGKSGHIGRKMAATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISN-SGESSEILAL 113 (326)
T ss_pred HHHHHHHHHHhcCCeEEEEeCcHhHHHHHHHHHHHhcCCceeEEeChHHhhccccccCCCCCEEEEEeC-CCCCHHHHHH
Confidence 45554444344222234467776665543333 3445566666544433322111111 1222333332 2333344444
Q ss_pred HHHhhcCCceEEEEc-CCCCCcC
Q 014492 211 ADAVEREKPKCIFLT-SPNNPDG 232 (423)
Q Consensus 211 ~~~i~~~~~~~i~l~-~p~NPtG 232 (423)
.+..++.+.+.|.++ +++||.+
T Consensus 114 ~~~ak~~g~~vi~iT~~~~s~la 136 (326)
T PRK10892 114 IPVLKRLHVPLICITGRPESSMA 136 (326)
T ss_pred HHHHHHCCCcEEEEECCCCCccc
Confidence 444444667777776 6777744
No 434
>PLN02565 cysteine synthase
Probab=36.04 E-value=1.8e+02 Score=27.82 Aligned_cols=50 Identities=14% Similarity=-0.001 Sum_probs=32.5
Q ss_pred EEEeCCHHHHHHHHHHHhcCCC--CeEEEcCCCchhhHHHHHHCCCeEEEecC
Q 014492 149 ILVGCGADELIDLIMRCVLDPG--DKIVDCPPTFTMYEFDAAVNGAAVVKVPR 199 (423)
Q Consensus 149 i~~t~G~~~al~~~~~~l~~~g--d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~ 199 (423)
|+-.+++..++.++..+-. -| -.|+++.-+-..-....+.+|++++.++.
T Consensus 70 vv~aSsGN~g~alA~~a~~-~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~ 121 (322)
T PLN02565 70 LIEPTSGNTGIGLAFMAAA-KGYKLIITMPASMSLERRIILLAFGAELVLTDP 121 (322)
T ss_pred EEEECCChHHHHHHHHHHH-cCCeEEEEeCCCCcHHHHHHHHHcCCEEEEeCC
Confidence 6666667677766665432 34 33445554455666778889999999874
No 435
>PF14097 SpoVAE: Stage V sporulation protein AE1
Probab=35.78 E-value=1.5e+02 Score=25.34 Aligned_cols=86 Identities=26% Similarity=0.392 Sum_probs=45.3
Q ss_pred HHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCcccc-CCCchhhhhccCCcEEEEc---
Q 014492 208 ELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFS-GLESRMEWVKKHDNLIVLR--- 279 (423)
Q Consensus 208 ~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~-~~~~~~~~~~~~~~~i~i~--- 279 (423)
..+|.+..+-.-+.|-. +..||| .++-+++.++.+. .++|.+|+.=.... .++..+..+..++.+=+++
T Consensus 14 ravE~aa~~iGgRCIS~-S~GNPT--~lsG~elV~lIk~a~~DPV~VMfDD~G~~g~G~GE~Al~~v~~h~~IeVLG~iA 90 (180)
T PF14097_consen 14 RAVEIAAKNIGGRCISQ-SAGNPT--PLSGEELVELIKQAPHDPVLVMFDDKGFIGEGPGEQALEYVANHPDIEVLGAIA 90 (180)
T ss_pred HHHHHHHHHhCcEEEec-cCCCCC--cCCHHHHHHHHHhCCCCCEEEEEeCCCCCCCCccHHHHHHHHcCCCceEEEEEE
Confidence 34444443233444442 566775 4677888887764 67888888743222 2334444544444432222
Q ss_pred cChhhhcccCccccccc
Q 014492 280 TFSKRAGLAGLRVGYGA 296 (423)
Q Consensus 280 S~SK~~g~~G~R~G~i~ 296 (423)
=.|+..+..|.|+-+-+
T Consensus 91 VASnT~~~~g~~VD~si 107 (180)
T PF14097_consen 91 VASNTHGAEGTKVDVSI 107 (180)
T ss_pred EEecCCCCCceEeEEEE
Confidence 23555555666665444
No 436
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=35.68 E-value=1.3e+02 Score=27.75 Aligned_cols=71 Identities=13% Similarity=0.105 Sum_probs=41.9
Q ss_pred cEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEc
Q 014492 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT 225 (423)
Q Consensus 148 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~ 225 (423)
.|++..|++++-.++- .|.+.|..|+...-+-..-.. ....|...+.. ..+|.+.+.+.+.+.++++|+-.
T Consensus 2 ~ILvlGGT~egr~la~-~L~~~g~~v~~s~~t~~~~~~-~~~~g~~~v~~-----g~l~~~~l~~~l~~~~i~~VIDA 72 (256)
T TIGR00715 2 TVLLMGGTVDSRAIAK-GLIAQGIEILVTVTTSEGKHL-YPIHQALTVHT-----GALDPQELREFLKRHSIDILVDA 72 (256)
T ss_pred eEEEEechHHHHHHHH-HHHhCCCeEEEEEccCCcccc-ccccCCceEEE-----CCCCHHHHHHHHHhcCCCEEEEc
Confidence 4888999888665544 466778766643322211111 11233333332 25778889888887788877743
No 437
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=35.27 E-value=3.1e+02 Score=24.68 Aligned_cols=96 Identities=14% Similarity=0.047 Sum_probs=45.2
Q ss_pred CcEEEeCCHH-HHH-HHHHHHhcCCCCeEEEcCCCchhhHHH-HHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CC
Q 014492 147 DHILVGCGAD-ELI-DLIMRCVLDPGDKIVDCPPTFTMYEFD-AAVNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (423)
Q Consensus 147 ~~i~~t~G~~-~al-~~~~~~l~~~gd~Vl~~~p~y~~~~~~-~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~ 218 (423)
..+++|.|+. .+| ..+...|.+.|..|++.... ...... .+..+.++..++.|- -|.+++++.++. .+
T Consensus 8 k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~-~~~~~~~~~~~~~~~~~~~~Dl---~~~~~v~~~~~~~~~~~g~ 83 (252)
T PRK06079 8 KKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQN-DRMKKSLQKLVDEEDLLVECDV---ASDESIERAFATIKERVGK 83 (252)
T ss_pred CEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCc-hHHHHHHHhhccCceeEEeCCC---CCHHHHHHHHHHHHHHhCC
Confidence 4566666552 233 44455577889888765432 111111 222233445555432 244555443321 35
Q ss_pred ceEEEEcC-CCCCc---Cc--CCCHHHHHHHHcC
Q 014492 219 PKCIFLTS-PNNPD---GS--IINDEDLLKILEM 246 (423)
Q Consensus 219 ~~~i~l~~-p~NPt---G~--~~~~~~l~~i~~~ 246 (423)
..+++.+. ...+. +. -.+.++++...+.
T Consensus 84 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~i 117 (252)
T PRK06079 84 IDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDI 117 (252)
T ss_pred CCEEEEcccccccccccCCcccCCHHHHHHHhCc
Confidence 66666442 12221 21 2355666666554
No 438
>PRK07063 short chain dehydrogenase; Provisional
Probab=35.15 E-value=3.3e+02 Score=24.39 Aligned_cols=98 Identities=21% Similarity=0.192 Sum_probs=48.3
Q ss_pred CCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHH-----CCCeEEEecCCCCCCCCHHHHHHHhhc----
Q 014492 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV-----NGAAVVKVPRKSDFSLNVELIADAVER---- 216 (423)
Q Consensus 146 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~-----~g~~~~~v~~~~~~~~d~~~l~~~i~~---- 216 (423)
...+++|.|+...=..+...|++.|..|++..-.-.......+. .+.++..++.|-. |.+++++.+.+
T Consensus 7 ~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~---~~~~~~~~~~~~~~~ 83 (260)
T PRK07063 7 GKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVT---DAASVAAAVAAAEEA 83 (260)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCC---CHHHHHHHHHHHHHH
Confidence 34566666655444455666788888777654433322222221 3455666654422 34444444321
Q ss_pred -CCceEEEEcCCCCCcC--cCCCHHHHHHHHcC
Q 014492 217 -EKPKCIFLTSPNNPDG--SIINDEDLLKILEM 246 (423)
Q Consensus 217 -~~~~~i~l~~p~NPtG--~~~~~~~l~~i~~~ 246 (423)
.++..++-+....+.+ ...+.+++++..+.
T Consensus 84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~ 116 (260)
T PRK07063 84 FGPLDVLVNNAGINVFADPLAMTDEDWRRCFAV 116 (260)
T ss_pred hCCCcEEEECCCcCCCCChhhCCHHHHHHHHHh
Confidence 3566666542222112 22455666665554
No 439
>COG2004 RPS24A Ribosomal protein S24E [Translation, ribosomal structure and biogenesis]
Probab=35.12 E-value=52 Score=25.72 Aligned_cols=26 Identities=27% Similarity=0.548 Sum_probs=22.2
Q ss_pred CCcchHHHHHHHHHHhCCCCCcEEEe
Q 014492 127 PDPESRRLRAALAKDSGLESDHILVG 152 (423)
Q Consensus 127 ~~~g~~~lr~~ia~~~g~~~~~i~~t 152 (423)
++|.-.++|+.||+.+|.+.+.|++-
T Consensus 30 ~TPSr~evrekla~~l~~d~e~VvV~ 55 (107)
T COG2004 30 PTPSRKEVREKLAAMLGADKELVVVD 55 (107)
T ss_pred CCCCHHHHHHHHHHHHCCCcceEEEE
Confidence 56677899999999999999888774
No 440
>PRK08862 short chain dehydrogenase; Provisional
Probab=34.68 E-value=1.9e+02 Score=25.72 Aligned_cols=76 Identities=14% Similarity=0.154 Sum_probs=40.9
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHH---HHHCCCeEEEecCCCCCCCCHHHHHHHhh---c--C-
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVE---R--E- 217 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~---~--~- 217 (423)
..+++|.|+...=..+...|.+.|..|++....-...... .+..|.++..+..|. -|.+++++.++ + .
T Consensus 6 k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~g~ 82 (227)
T PRK08862 6 SIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKD---FSQESIRHLFDAIEQQFNR 82 (227)
T ss_pred eEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccC---CCHHHHHHHHHHHHHHhCC
Confidence 3556665555333445555788898888765444332222 223466666666543 24555554442 1 2
Q ss_pred CceEEEEc
Q 014492 218 KPKCIFLT 225 (423)
Q Consensus 218 ~~~~i~l~ 225 (423)
++..++.+
T Consensus 83 ~iD~li~n 90 (227)
T PRK08862 83 APDVLVNN 90 (227)
T ss_pred CCCEEEEC
Confidence 56766644
No 441
>PF02702 KdpD: Osmosensitive K+ channel His kinase sensor domain; InterPro: IPR003852 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. Signal transducing histidine kinases are the key elements in two-component signal transduction systems, which control complex processes such as the initiation of development in microorganisms [, ]. Examples of histidine kinases are EnvZ, which plays a central role in osmoregulation [], and CheA, which plays a central role in the chemotaxis system []. Histidine kinases usually have an N-terminal ligand-binding domain and a C-terminal kinase domain, but other domains may also be present. The kinase domain is responsible for the autophosphorylation of the histidine with ATP, the phosphotransfer from the kinase to an aspartate of the response regulator, and (with bifunctional enzymes) the phosphotransfer from aspartyl phosphate back to ADP or to water []. The kinase core has a unique fold, distinct from that of the Ser/Thr/Tyr kinase superfamily. HKs can be roughly divided into two classes: orthodox and hybrid kinases [, ]. Most orthodox HKs, typified by the Escherichia coli EnvZ protein, function as periplasmic membrane receptors and have a signal peptide and transmembrane segment(s) that separate the protein into a periplasmic N-terminal sensing domain and a highly conserved cytoplasmic C-terminal kinase core. Members of this family, however, have an integral membrane sensor domain. Not all orthodox kinases are membrane bound, e.g., the nitrogen regulatory kinase NtrB (GlnL) is a soluble cytoplasmic HK []. Hybrid kinases contain multiple phosphodonor and phosphoacceptor sites and use multi-step phospho-relay schemes instead of promoting a single phosphoryl transfer. In addition to the sensor domain and kinase core, they contain a CheY-like receiver domain and a His-containing phosphotransfer (HPt) domain. This entry represents the N-terminal domain found in KdpD sensor kinase proteins, which regulate the kdpFABC operon responsible for potassium transport []. The N-terminal domain forms part of the cytoplasmic region of the protein, which may be the sensor domain responsible for sensing turgor pressure [].; GO: 0000155 two-component sensor activity, 0004673 protein histidine kinase activity, 0000160 two-component signal transduction system (phosphorelay), 0016020 membrane; PDB: 2R8R_B.
Probab=34.55 E-value=1.3e+02 Score=26.72 Aligned_cols=96 Identities=19% Similarity=0.281 Sum_probs=49.0
Q ss_pred eCCHHHHHHHHHHHhcCCC-CeEEEcCCCchhhHHHHHHCCCeEEEecC---C--CCCCCCHHHHHHHhhcCCceEEEEc
Q 014492 152 GCGADELIDLIMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPR---K--SDFSLNVELIADAVEREKPKCIFLT 225 (423)
Q Consensus 152 t~G~~~al~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~---~--~~~~~d~~~l~~~i~~~~~~~i~l~ 225 (423)
+.|-|.++-.-.+.+.+.| |.|+-.--+|..-.-.+...|.++++-.. . .-..+|++++.+ .+|.++++.
T Consensus 15 GVGKTy~ML~ea~~l~~~G~DVViG~vethgR~et~~l~~gLe~iP~~~i~y~g~~~~E~DldaiL~----R~P~vvLVD 90 (211)
T PF02702_consen 15 GVGKTYAMLQEAHRLKEQGVDVVIGYVETHGRPETEALLEGLEVIPRKKIEYRGRTLEEMDLDAILA----RRPQVVLVD 90 (211)
T ss_dssp TSSHHHHHHHHHHHHHHTT--EEEEE---TT-HHHHHHHCTS-B---EEEEETTEEEEE--HHHHHH----H--SEEEES
T ss_pred CCCHHHHHHHHHHHHHHCCCCEEEEEecCCCcHHHHHHHcCCCcCCCeeEeeCCEecccCCHHHHHh----cCCCEEEeC
Confidence 4577777766666677777 66665444554444444556776554331 0 112578777655 467888886
Q ss_pred --CCCCCcCcCCC--HHHHHHHHcCCCEEE
Q 014492 226 --SPNNPDGSIIN--DEDLLKILEMPILVV 251 (423)
Q Consensus 226 --~p~NPtG~~~~--~~~l~~i~~~~~~li 251 (423)
...|+-|.-.. .+++++|.+.|+-|+
T Consensus 91 ELAHtN~pgsr~~kR~qDVeeLL~aGIdV~ 120 (211)
T PF02702_consen 91 ELAHTNAPGSRHKKRYQDVEELLDAGIDVY 120 (211)
T ss_dssp -TT-B--TT-SSSBHHHHHHHHHHTT-EEE
T ss_pred cccccCCCCCCCcccHHhHHHHHHCCCeEE
Confidence 55688887654 467888888877554
No 442
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=34.28 E-value=3.3e+02 Score=24.01 Aligned_cols=97 Identities=20% Similarity=0.144 Sum_probs=48.6
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CCceE
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKC 221 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~ 221 (423)
..+++|.|+...=..+...|++.|..|.+...............+.++..++.|- -|.+.+++.+.+ .++..
T Consensus 7 ~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~~~id~ 83 (245)
T PRK12936 7 RKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANL---SDRDEVKALGQKAEADLEGVDI 83 (245)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccC---CCHHHHHHHHHHHHHHcCCCCE
Confidence 4566665554433445666788888776654443333333333344555554332 244555544321 35677
Q ss_pred EEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 222 IFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 222 i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
++-+....+.+. ..+.+++.+..+.
T Consensus 84 vi~~ag~~~~~~~~~~~~~~~~~~~~~ 110 (245)
T PRK12936 84 LVNNAGITKDGLFVRMSDEDWDSVLEV 110 (245)
T ss_pred EEECCCCCCCCccccCCHHHHHHHHhh
Confidence 776533322222 2355566655554
No 443
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=34.11 E-value=2.5e+02 Score=25.82 Aligned_cols=72 Identities=13% Similarity=0.161 Sum_probs=44.9
Q ss_pred CCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCH---HHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHc
Q 014492 169 PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNV---ELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE 245 (423)
Q Consensus 169 ~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~---~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~ 245 (423)
++..+++..+.| ...++.+|.+++.+.. ++..+.+ .++.+.+++.++++|+.. ++.+ ...++.|++
T Consensus 169 ~~~~~v~~H~af---~Y~~~~ygl~~~~~~~-~~~eps~~~l~~l~~~ik~~~v~~if~e-~~~~------~~~~~~la~ 237 (266)
T cd01018 169 KQRAFMVYHPAW---GYFARDYGLTQIPIEE-EGKEPSPADLKRLIDLAKEKGVRVVFVQ-PQFS------TKSAEAIAR 237 (266)
T ss_pred CCCeEEEECchh---HHHHHHcCCEEEecCC-CCCCCCHHHHHHHHHHHHHcCCCEEEEc-CCCC------cHHHHHHHH
Confidence 345677755554 5667889999887642 3445644 555556666789988865 3322 244667777
Q ss_pred C-CCEEE
Q 014492 246 M-PILVV 251 (423)
Q Consensus 246 ~-~~~li 251 (423)
. |+.++
T Consensus 238 ~~g~~v~ 244 (266)
T cd01018 238 EIGAKVV 244 (266)
T ss_pred HcCCeEE
Confidence 5 76554
No 444
>PRK06484 short chain dehydrogenase; Validated
Probab=33.86 E-value=2.1e+02 Score=29.14 Aligned_cols=128 Identities=10% Similarity=0.082 Sum_probs=63.0
Q ss_pred cEEEeCCHHHHHH-HHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CCceE
Q 014492 148 HILVGCGADELID-LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKC 221 (423)
Q Consensus 148 ~i~~t~G~~~al~-~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~ 221 (423)
.+++|.| +.+|. .+...|.+.|..|++..-.-.......+..+.++..++.|- -|.+.+++.+.+ .++..
T Consensus 271 ~~lItGa-s~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~g~id~ 346 (520)
T PRK06484 271 VVAITGG-ARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADI---TDEAAVESAFAQIQARWGRLDV 346 (520)
T ss_pred EEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccC---CCHHHHHHHHHHHHHHcCCCCE
Confidence 4455544 44554 44555778888887765443344444444566666665432 244555544432 35666
Q ss_pred EEEcCCCC-CcC--cCCCHHHHHHHHcCCC---EEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccC
Q 014492 222 IFLTSPNN-PDG--SIINDEDLLKILEMPI---LVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAG 289 (423)
Q Consensus 222 i~l~~p~N-PtG--~~~~~~~l~~i~~~~~---~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G 289 (423)
++-|.-.. +.+ .-.+.+++++..+.|+ +.+.-.+ .......++++.+.|.+-..+.+|
T Consensus 347 li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~----------~~~~~~~g~iv~isS~~~~~~~~~ 410 (520)
T PRK06484 347 LVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAA----------ARLMSQGGVIVNLGSIASLLALPP 410 (520)
T ss_pred EEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHH----------HHHhccCCEEEEECchhhcCCCCC
Confidence 66442211 111 1235566666665432 1111111 111123457788888765444444
No 445
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=33.47 E-value=1.9e+02 Score=22.73 Aligned_cols=15 Identities=20% Similarity=0.306 Sum_probs=7.9
Q ss_pred EEeCCHHHHHHHHHH
Q 014492 150 LVGCGADELIDLIMR 164 (423)
Q Consensus 150 ~~t~G~~~al~~~~~ 164 (423)
+++.|++..+...+.
T Consensus 5 i~G~G~S~~~a~~~~ 19 (128)
T cd05014 5 VTGVGKSGHIARKIA 19 (128)
T ss_pred EEeCcHhHHHHHHHH
Confidence 456666655544443
No 446
>PRK04210 phosphoenolpyruvate carboxykinase; Provisional
Probab=33.21 E-value=4.5e+02 Score=27.38 Aligned_cols=85 Identities=14% Similarity=0.153 Sum_probs=59.4
Q ss_pred hHHHHHHHHHHhCC-CCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCch-------hhHHHHHHCCCeEEEecCC--
Q 014492 131 SRRLRAALAKDSGL-ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT-------MYEFDAAVNGAAVVKVPRK-- 200 (423)
Q Consensus 131 ~~~lr~~ia~~~g~-~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~-------~~~~~~~~~g~~~~~v~~~-- 200 (423)
.++|++.+++...+ .|+.|+++.|+.+=...+...+++.|..+-+..+-|+ .....++.-..+.+..+..
T Consensus 10 n~~l~~wv~e~~~l~~Pd~v~~cdGS~ee~~~l~~~~v~~G~~~~L~~~k~~~~~~~rsdp~DvARve~rTfI~s~~~~d 89 (601)
T PRK04210 10 NPKLLEWVAEVAELTQPDRVVWCDGSEEEYDRLRDQAVEAGTEIKLNPEKRPNSFLARSDPSDVARVEDRTFICSEKEED 89 (601)
T ss_pred CHHHHHHHHHHHHhhCCCEEEEeCCCHHHHHHHHHHHHHcCCEeeccCCCCCceeeccCChhhhhhcccceEEecCchhh
Confidence 46788888887754 7999999999999999999988888877666544432 3345566555555555421
Q ss_pred ---CCCCCCHHHHHHHhh
Q 014492 201 ---SDFSLNVELIADAVE 215 (423)
Q Consensus 201 ---~~~~~d~~~l~~~i~ 215 (423)
.+.-.|++++.+.+.
T Consensus 90 agp~nnw~~p~e~~~~l~ 107 (601)
T PRK04210 90 AGPTNNWMDPAEMRETLK 107 (601)
T ss_pred cCCccCcCCHHHHHHHHH
Confidence 123467888887774
No 447
>PF01902 ATP_bind_4: ATP-binding region; InterPro: IPR002761 This domain is about 200 amino acids long with a strongly conserved motif SGGKD at the N-terminal. The structure of Q8U2K6 from SWISSPROT from Pyrococcus furiosus has been resolved to 2.7A and is suggested to be a putative N-type pytophosphatase. In some members of the family e.g. Q12429 from SWISSPROT, this domain is associated with IPR006175 from INTERPRO, another domain of unknown function. Proteins with this uncharacterised domain include two apparent ortholog families in the archaea, one of which is universal among the first four completed archaeal genomes. The domain comprises the full length of the archaeal proteins and the first third of fungal proteins.; PDB: 3RK0_A 3RK1_A 3RJZ_A 2D13_D.
Probab=33.13 E-value=3e+02 Score=24.62 Aligned_cols=94 Identities=15% Similarity=0.178 Sum_probs=48.3
Q ss_pred EEEeCCHHHHHHHHHHHhcCCCCeEE----Ec-C----CCc----hhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhh
Q 014492 149 ILVGCGADELIDLIMRCVLDPGDKIV----DC-P----PTF----TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE 215 (423)
Q Consensus 149 i~~t~G~~~al~~~~~~l~~~gd~Vl----~~-~----p~y----~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~ 215 (423)
+++-+|+......+.+++-+ .+.+. .+ . ..| .....+++..|+.++.++......--.+++.+.++
T Consensus 4 v~l~SGGKDS~lAl~~a~~~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~g~~~~~~~~l~~~l~ 82 (218)
T PF01902_consen 4 VALWSGGKDSCLALYRALRQ-HEVVCLLTMVPEEEDSYMFHGVNIELIEAQAEALGIPLIEIPTSGDEEDYVEDLKEALK 82 (218)
T ss_dssp EEE--SSHHHHHHHHHHHHT--EEEEEEEEEESTTT-SSS-STTGTCHHHHHHHHT--EEEEEE---CCCHHHHHHHHHC
T ss_pred EEEEcCcHHHHHHHHHHHHh-CCccEEEEeccCCCCcccccccCHHHHHHHHHHCCCCEEEEEccCccchhhHHHHHHHH
Confidence 55667777777677666544 33211 11 1 111 24556778899999988864222223688888887
Q ss_pred cCCceEEEEcCCCCCcCcCCCHHH---HHHHHcC-CCEE
Q 014492 216 REKPKCIFLTSPNNPDGSIINDED---LLKILEM-PILV 250 (423)
Q Consensus 216 ~~~~~~i~l~~p~NPtG~~~~~~~---l~~i~~~-~~~l 250 (423)
+-++..++ +|.+.+... ++.+|+. |+-.
T Consensus 83 ~~~v~~vv-------~GdI~~~~~r~~~e~vc~~lGl~~ 114 (218)
T PF01902_consen 83 ELKVEAVV-------FGDIDSEYQRNWVERVCERLGLEA 114 (218)
T ss_dssp TC--SEEE---------TTS-HHHHHHHHHHHHHCT-EE
T ss_pred HcCCCEEE-------ECcCCcHHHHHHHHHHHHHcCCEE
Confidence 66777777 788887744 4555654 7743
No 448
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=33.09 E-value=1.8e+02 Score=27.60 Aligned_cols=71 Identities=17% Similarity=0.126 Sum_probs=43.5
Q ss_pred cEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEE
Q 014492 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIF 223 (423)
Q Consensus 148 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~ 223 (423)
.|++|.|+--.=......|++.|..|++.+.-..+........-++.+. +.-.|-+.|.+.+.+.++.+|+
T Consensus 2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~-----gDi~D~~~L~~vf~~~~idaVi 72 (329)
T COG1087 2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYE-----GDLLDRALLTAVFEENKIDAVV 72 (329)
T ss_pred eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEE-----eccccHHHHHHHHHhcCCCEEE
Confidence 4788888776666777778889966555444333333333221123333 2356778888888877877765
No 449
>TIGR00289 conserved hypothetical protein TIGR00289. Homologous proteins related to MJ0570 of Methanococcus jannaschii include both the apparent orthologs found by this model above the trusted cutoff, the much longer protein YLR143W from Saccharomyces cerevisiae, and second homologous proteins from Archaeoglobus fulgidus and Pyrococcus horikoshii that appear to represent a second orthologous group.
Probab=32.89 E-value=3.7e+02 Score=24.18 Aligned_cols=96 Identities=14% Similarity=0.195 Sum_probs=0.0
Q ss_pred EEEeCCHHHHHHHHHHHhcCCCCeEEEc-------------CCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhh
Q 014492 149 ILVGCGADELIDLIMRCVLDPGDKIVDC-------------PPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE 215 (423)
Q Consensus 149 i~~t~G~~~al~~~~~~l~~~gd~Vl~~-------------~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~ 215 (423)
++..+|+......+..++-+ .+.+.+. .+.......+++..|+.++.+.......--.+++.+.+.
T Consensus 4 ~vl~SGGKDS~lAl~~~~~~-~~V~~L~~~~~~~~~s~~~h~~~~~~~~~qA~algiPl~~~~~~~~~e~~~~~l~~~l~ 82 (222)
T TIGR00289 4 AVLYSGGKDSILALYKALEE-HEVISLVGVFSENEESYMFHSPNLHLTDLVAEAVGIPLIKLYTSGEEEKEVEDLAGQLG 82 (222)
T ss_pred EEEecCcHHHHHHHHHHHHc-CeeEEEEEEcCCCCCccccccCCHHHHHHHHHHcCCCeEEEEcCCchhHHHHHHHHHHH
Q ss_pred cCCceEEEEcCCCCCcCcCCCH---HHHHHHHcC-CCEEEE
Q 014492 216 REKPKCIFLTSPNNPDGSIIND---EDLLKILEM-PILVVL 252 (423)
Q Consensus 216 ~~~~~~i~l~~p~NPtG~~~~~---~~l~~i~~~-~~~li~ 252 (423)
+.++..|+ +|.+.+. ..++.+|+. |+..+.
T Consensus 83 ~~gv~~vv-------~GdI~s~~qr~~~e~vc~~~gl~~~~ 116 (222)
T TIGR00289 83 ELDVEALC-------IGAIESNYQKSRIDKVCRELGLKSIA 116 (222)
T ss_pred HcCCCEEE-------ECccccHHHHHHHHHHHHHcCCEEec
No 450
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=32.33 E-value=3.8e+02 Score=24.18 Aligned_cols=100 Identities=10% Similarity=0.009 Sum_probs=51.1
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHH---HHHCCCeEEEecCCCCCCCCHHHHHHHhhc----
Q 014492 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVER---- 216 (423)
Q Consensus 144 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---- 216 (423)
++...+++|.|+...=..+...|.+.|..|++....-...... .+..|.++..++.|- -|.+.+++.+.+
T Consensus 8 ~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl---~~~~~~~~~~~~~~~~ 84 (265)
T PRK07097 8 LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDV---TDEDGVQAMVSQIEKE 84 (265)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCC---CCHHHHHHHHHHHHHh
Confidence 3334566666655444455556777887777654433322222 222466777776543 245555554432
Q ss_pred -CCceEEEEcCCCCCcC--cCCCHHHHHHHHcC
Q 014492 217 -EKPKCIFLTSPNNPDG--SIINDEDLLKILEM 246 (423)
Q Consensus 217 -~~~~~i~l~~p~NPtG--~~~~~~~l~~i~~~ 246 (423)
.++..++.+......+ ...+.+++.+..+.
T Consensus 85 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~ 117 (265)
T PRK07097 85 VGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDI 117 (265)
T ss_pred CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHh
Confidence 3467777653322111 12345566665554
No 451
>cd06578 HemD Uroporphyrinogen-III synthase (HemD) catalyzes the asymmetrical cyclization of tetrapyrrole (linear) to uroporphyrinogen-III, the fourth step in the biosynthesis of heme. This ubiquitous enzyme is present in eukaryotes, bacteria and archaea. Mutations in the human uroporphyrinogen-III synthase gene cause congenital erythropoietic porphyria, a recessive inborn error of metabolism also known as Gunther disease.
Probab=32.24 E-value=2.4e+02 Score=24.86 Aligned_cols=61 Identities=16% Similarity=0.064 Sum_probs=34.7
Q ss_pred CCCeEEEcCCCc--hhhHHHHHHCCCeEEEecCCC-CCCCCHHHHHHHhhcCCceEEEEcCCCC
Q 014492 169 PGDKIVDCPPTF--TMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNN 229 (423)
Q Consensus 169 ~gd~Vl~~~p~y--~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~N 229 (423)
.+..|++....- ..+....+..|+++..++.-. ....+.+...+.+.+.....|++++++.
T Consensus 121 ~~~~il~~~g~~~~~~l~~~L~~~g~~v~~~~~Y~~~~~~~~~~~~~~l~~~~~~~iiftS~~~ 184 (239)
T cd06578 121 KGKRILRPRGGRAREDLAEALRERGAEVDEVEVYRTVPPDLDAELLELLEEGAIDAVLFTSPST 184 (239)
T ss_pred CCCEEEEEcCcchhHHHHHHHHHCCCEEEEEEEEEEECCCCcHHHHHHHHcCCCcEEEEeCHHH
Confidence 466777766554 355555666788888887311 1111224555656544455777777654
No 452
>CHL00197 carA carbamoyl-phosphate synthase arginine-specific small subunit; Provisional
Probab=32.04 E-value=1.8e+02 Score=28.55 Aligned_cols=67 Identities=19% Similarity=0.183 Sum_probs=40.1
Q ss_pred CCeEEEcCCCch-hhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEc-CCCCCcCcCCCHHHHHHHH
Q 014492 170 GDKIVDCPPTFT-MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNNPDGSIINDEDLLKIL 244 (423)
Q Consensus 170 gd~Vl~~~p~y~-~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~-~p~NPtG~~~~~~~l~~i~ 244 (423)
+.+|++.+-.+. .....++..|++++.+|.+ .+.+.++. .++.+|+++ .|.+|.......+.++++.
T Consensus 192 ~~~I~viD~g~k~ni~~~L~~~G~~v~vvp~~----~~~~~i~~----~~~dgIilSgGPg~p~~~~~~i~~i~~~~ 260 (382)
T CHL00197 192 QLKIIVIDFGVKYNILRRLKSFGCSITVVPAT----SPYQDILS----YQPDGILLSNGPGDPSAIHYGIKTVKKLL 260 (382)
T ss_pred CCEEEEEECCcHHHHHHHHHHCCCeEEEEcCC----CCHHHHhc----cCCCEEEEcCCCCChhHHHHHHHHHHHHH
Confidence 346666655553 4556667789999999843 24555532 367888887 7788754322233344443
No 453
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=31.54 E-value=1e+02 Score=25.19 Aligned_cols=56 Identities=25% Similarity=0.282 Sum_probs=41.9
Q ss_pred CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHH-HHHHHHcC------CCE-EEEccCCc
Q 014492 202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE-DLLKILEM------PIL-VVLDEAYT 257 (423)
Q Consensus 202 ~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~-~l~~i~~~------~~~-li~Deay~ 257 (423)
+...+++.|.+.+.+.++..+++-.|-|..|..-+.. .+++.++. ++. ..+||-|.
T Consensus 35 ~~~~~~~~l~~li~~~~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~T 98 (135)
T PF03652_consen 35 NREKDIEELKKLIEEYQIDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDERLT 98 (135)
T ss_dssp CCCCCHHHHHHHHHHCCECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCS
T ss_pred CCchHHHHHHHHHHHhCCCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChh
Confidence 3467899999999989999999999999989876543 34444432 554 66899886
No 454
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=31.21 E-value=2.5e+02 Score=25.80 Aligned_cols=57 Identities=26% Similarity=0.244 Sum_probs=34.9
Q ss_pred hhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC
Q 014492 182 MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM 246 (423)
Q Consensus 182 ~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~ 246 (423)
.|...+..+|+.-+.+|.... -..+.+.+.+++...+.+++++|+.| .++++++++.
T Consensus 106 ~f~~~~~~aGvdgviipDlp~--ee~~~~~~~~~~~gl~~i~lv~P~T~------~eri~~i~~~ 162 (256)
T TIGR00262 106 EFYAKCKEVGVDGVLVADLPL--EESGDLVEAAKKHGVKPIFLVAPNAD------DERLKQIAEK 162 (256)
T ss_pred HHHHHHHHcCCCEEEECCCCh--HHHHHHHHHHHHCCCcEEEEECCCCC------HHHHHHHHHh
Confidence 344455567877777772211 12445555566567777777777753 6777777776
No 455
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=31.13 E-value=4.8e+02 Score=25.88 Aligned_cols=97 Identities=15% Similarity=0.169 Sum_probs=49.0
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEE
Q 014492 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIF 223 (423)
Q Consensus 144 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~ 223 (423)
.+...+++|.|+...=..+...+.+.|.+|++....-..........+..+..+..| --|.+++.+.+. ++..++
T Consensus 176 l~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~D---vsd~~~v~~~l~--~IDiLI 250 (406)
T PRK07424 176 LKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQ---VGQEAALAELLE--KVDILI 250 (406)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEee---CCCHHHHHHHhC--CCCEEE
Confidence 344567776555444444455677888777654322111111111112223333322 124667776663 677777
Q ss_pred EcCCCCCcCcCCCHHHHHHHHcC
Q 014492 224 LTSPNNPDGSIINDEDLLKILEM 246 (423)
Q Consensus 224 l~~p~NPtG~~~~~~~l~~i~~~ 246 (423)
.+...++.+ -.+.+++.+..+.
T Consensus 251 nnAGi~~~~-~~s~e~~~~~~~v 272 (406)
T PRK07424 251 INHGINVHG-ERTPEAINKSYEV 272 (406)
T ss_pred ECCCcCCCC-CCCHHHHHHHHHH
Confidence 664444433 3566666666654
No 456
>PRK10494 hypothetical protein; Provisional
Probab=31.08 E-value=1.5e+02 Score=27.31 Aligned_cols=69 Identities=10% Similarity=0.117 Sum_probs=41.1
Q ss_pred hHHHHHHHHHHhCCCCCcEEEeC---CHHHHHHHHHHHhcCCCCeEEEcCCCch-hhHHHHHHCCCeEEEecCC
Q 014492 131 SRRLRAALAKDSGLESDHILVGC---GADELIDLIMRCVLDPGDKIVDCPPTFT-MYEFDAAVNGAAVVKVPRK 200 (423)
Q Consensus 131 ~~~lr~~ia~~~g~~~~~i~~t~---G~~~al~~~~~~l~~~gd~Vl~~~p~y~-~~~~~~~~~g~~~~~v~~~ 200 (423)
..++-+.++..+|+++++|++-+ .+.|....... +++....++++++.|. .-...++..|.+++++|.+
T Consensus 138 EA~~~~~~l~~lGVp~~~Ii~e~~s~nT~eNa~~~~~-~~~~~~iiLVTsa~Hm~RA~~~f~~~Gl~v~p~Ptd 210 (259)
T PRK10494 138 TAEVGARVAQSLGVPREDIITLDLPKDTEEEAAAVKQ-AIGDAPFLLVTSASHLPRAMIFFQQEGLNPLPAPAN 210 (259)
T ss_pred HHHHHHHHHHHcCCCHHHeeeCCCCCCHHHHHHHHHH-HhCCCCEEEECCHHHHHHHHHHHHHcCCceeecCCc
Confidence 34555666667899988888632 23333333333 4443334566665553 3335567799999999953
No 457
>COG1587 HemD Uroporphyrinogen-III synthase [Coenzyme metabolism]
Probab=30.82 E-value=4e+02 Score=24.15 Aligned_cols=78 Identities=15% Similarity=0.097 Sum_probs=50.3
Q ss_pred EeCCHHHHHHHHHHHhcCCCCeEEEcCCCch--hhHHHHHHCCCeEEEecCCCC--CCCCHHHHHHHhhcCCceEEEEcC
Q 014492 151 VGCGADELIDLIMRCVLDPGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRKSD--FSLNVELIADAVEREKPKCIFLTS 226 (423)
Q Consensus 151 ~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~--~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~i~l~~ 226 (423)
...+.++++...+......|++|++....-. .........|+++..++.-.. -..+.+.+...+...+..+|++++
T Consensus 104 p~~~~~~~l~~~l~~~~~~~~~vl~~~~~~~r~~l~~~L~~~G~~v~~~~~Y~~~~~~~~~~~~~~~~~~~~~d~v~ftS 183 (248)
T COG1587 104 PEDGDSEGLLEELPELLKGGKRVLILRGNGGREVLEEKLEERGAEVREVEVYRTEPPPLDEATLIELLKLGEVDAVVFTS 183 (248)
T ss_pred CCccchHHHHHHhhhhccCCCeEEEEcCCCchHHHHHHHHhCCCEEEEEeeeeecCCCccHHHHHHHHHhCCCCEEEEeC
Confidence 3457777777777766655788887665543 355666778999988883211 123355556666657788888866
Q ss_pred CC
Q 014492 227 PN 228 (423)
Q Consensus 227 p~ 228 (423)
+.
T Consensus 184 ~~ 185 (248)
T COG1587 184 SS 185 (248)
T ss_pred HH
Confidence 43
No 458
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=30.82 E-value=3.4e+02 Score=24.97 Aligned_cols=60 Identities=10% Similarity=-0.023 Sum_probs=33.9
Q ss_pred HHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCc--CcCCCHHHHHHHHc
Q 014492 185 FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPD--GSIINDEDLLKILE 245 (423)
Q Consensus 185 ~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPt--G~~~~~~~l~~i~~ 245 (423)
...+.+|+.++-.....+-+-..++++.+.. -+..+|++..|.-|. ..+.+.+++.+.++
T Consensus 191 al~~~~~i~~lVtK~SG~~Gg~~eKi~AA~~-lgi~vivI~RP~~~~~~~~~~~~~el~~~l~ 252 (256)
T TIGR00715 191 ALLREYRIDAVVTKASGEQGGELEKVKAAEA-LGINVIRIARPQTIPGVAIFDDISQLNQFVA 252 (256)
T ss_pred HHHHHcCCCEEEEcCCCCccchHHHHHHHHH-cCCcEEEEeCCCCCCCCccCCCHHHHHHHHH
Confidence 4455567666665532121233566666554 577778877775443 35567777665543
No 459
>TIGR01137 cysta_beta cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.
Probab=30.76 E-value=2.7e+02 Score=27.82 Aligned_cols=52 Identities=21% Similarity=0.103 Sum_probs=33.3
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCC--eEEEcCCCchhhHHHHHHCCCeEEEecC
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGD--KIVDCPPTFTMYEFDAAVNGAAVVKVPR 199 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd--~Vl~~~p~y~~~~~~~~~~g~~~~~v~~ 199 (423)
+.|+-++++..+..++..+- .-|- .|+++...-..-....+.+|++++.++.
T Consensus 63 ~~vv~~ssGN~g~alA~~a~-~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~ 116 (454)
T TIGR01137 63 DTIIEPTSGNTGIGLALVAA-IKGYKCIIVLPEKMSNEKVDVLKALGAEIVRTPT 116 (454)
T ss_pred CEEEEeCCcHHHHHHHHHHH-HcCCeEEEEeCCCcCHHHHHHHHHCCCEEEEcCC
Confidence 45777777777776666543 2343 3445544434555667889999999984
No 460
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=30.75 E-value=4e+02 Score=23.90 Aligned_cols=97 Identities=8% Similarity=0.020 Sum_probs=48.9
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCch-hhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CCce
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT-MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPK 220 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~-~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~ 220 (423)
..+++|.|+...=..+...|++.|..|++....-. ......+..+.++..+..|- -|.+++++.+++ .++.
T Consensus 9 k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl---~~~~~~~~~~~~~~~~~g~iD 85 (251)
T PRK12481 9 KVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADL---IQQKDIDSIVSQAVEVMGHID 85 (251)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCC---CCHHHHHHHHHHHHHHcCCCC
Confidence 45566666554445555667888988876533211 11222233566666666442 345555544432 3567
Q ss_pred EEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 221 CIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 221 ~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
.++-+....+.+. -.+.+++.+..+.
T Consensus 86 ~lv~~ag~~~~~~~~~~~~~~~~~~~~v 113 (251)
T PRK12481 86 ILINNAGIIRRQDLLEFGNKDWDDVINI 113 (251)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHhee
Confidence 6664422222222 2345666665554
No 461
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=30.69 E-value=1.1e+02 Score=28.61 Aligned_cols=48 Identities=10% Similarity=0.117 Sum_probs=30.7
Q ss_pred cCCCCCCCCHHHHHHHhh---cCCceEEEEcCCCCCcCcCCCHHHHHHHHcC
Q 014492 198 PRKSDFSLNVELIADAVE---REKPKCIFLTSPNNPDGSIINDEDLLKILEM 246 (423)
Q Consensus 198 ~~~~~~~~d~~~l~~~i~---~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~ 246 (423)
|.++++.+|.+.+++.++ +...+.|+++ -++--+..++.+|.+++++.
T Consensus 11 Pf~~dg~iD~~~l~~l~~~l~~~Gv~gi~v~-GstGE~~~Ls~eEr~~l~~~ 61 (289)
T cd00951 11 HFDADGSFDEDAYRAHVEWLLSYGAAALFAA-GGTGEFFSLTPDEYAQVVRA 61 (289)
T ss_pred CCCCCCCcCHHHHHHHHHHHHHcCCCEEEEC-cCCcCcccCCHHHHHHHHHH
Confidence 345566788888777664 2467777754 23334567788888777763
No 462
>PRK01178 rps24e 30S ribosomal protein S24e; Reviewed
Probab=30.52 E-value=68 Score=24.75 Aligned_cols=26 Identities=19% Similarity=0.348 Sum_probs=21.3
Q ss_pred CCcchHHHHHHHHHHhCCCCCcEEEe
Q 014492 127 PDPESRRLRAALAKDSGLESDHILVG 152 (423)
Q Consensus 127 ~~~g~~~lr~~ia~~~g~~~~~i~~t 152 (423)
+.+.-.++++.||+.++.+++.|++.
T Consensus 29 ~tpsr~eirekLa~~~~~~~~~vvv~ 54 (99)
T PRK01178 29 ATPSRKDVRKKLAAMLNADKELVVVR 54 (99)
T ss_pred CCCCHHHHHHHHHHHHCcCCCEEEEE
Confidence 45567899999999999888887764
No 463
>KOG3424 consensus 40S ribosomal protein S24 [Translation, ribosomal structure and biogenesis]
Probab=30.50 E-value=70 Score=25.34 Aligned_cols=26 Identities=23% Similarity=0.273 Sum_probs=21.8
Q ss_pred CCCcchHHHHHHHHHHhCCCCCcEEE
Q 014492 126 YPDPESRRLRAALAKDSGLESDHILV 151 (423)
Q Consensus 126 Y~~~g~~~lr~~ia~~~g~~~~~i~~ 151 (423)
-++..-.++||.|++.|..++|.|++
T Consensus 32 ~a~vsK~EirEKla~mYkt~~d~V~v 57 (132)
T KOG3424|consen 32 KANVSKTEIREKLAKMYKTTPDAVFV 57 (132)
T ss_pred CCCCCHHHHHHHHHHHhcCCcceEEE
Confidence 35556789999999999999998875
No 464
>PRK05867 short chain dehydrogenase; Provisional
Probab=30.50 E-value=3.8e+02 Score=23.96 Aligned_cols=99 Identities=9% Similarity=0.071 Sum_probs=49.9
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHH---HHCCCeEEEecCCCCCCCCHHHHHHHhhc-----
Q 014492 145 ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVER----- 216 (423)
Q Consensus 145 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~d~~~l~~~i~~----- 216 (423)
+...+++|.|+...=..+...|.+.|..|++..-.-....... +..+.++..+..|- -|.+.+++.+.+
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~ 84 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDV---SQHQQVTSMLDQVTAEL 84 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccC---CCHHHHHHHHHHHHHHh
Confidence 3345666666554444555567788888876544333222222 22455666665432 345555544431
Q ss_pred CCceEEEEcC-CCCCcC-cCCCHHHHHHHHcC
Q 014492 217 EKPKCIFLTS-PNNPDG-SIINDEDLLKILEM 246 (423)
Q Consensus 217 ~~~~~i~l~~-p~NPtG-~~~~~~~l~~i~~~ 246 (423)
.++..++.+. ...+.. .-.+.+++++..+.
T Consensus 85 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~ 116 (253)
T PRK05867 85 GGIDIAVCNAGIITVTPMLDMPLEEFQRLQNT 116 (253)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHh
Confidence 3677777552 222111 12355666665554
No 465
>PLN00011 cysteine synthase
Probab=30.40 E-value=2.6e+02 Score=26.60 Aligned_cols=52 Identities=13% Similarity=-0.008 Sum_probs=35.3
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCC--CeEEEcCCCchhhHHHHHHCCCeEEEecC
Q 014492 147 DHILVGCGADELIDLIMRCVLDPG--DKIVDCPPTFTMYEFDAAVNGAAVVKVPR 199 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~g--d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~ 199 (423)
+.|+..+++..++.++..+-. -| -.|+++...-..-....+.+|++++.++.
T Consensus 70 ~~vv~aSsGN~g~alA~~a~~-~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~ 123 (323)
T PLN00011 70 STLIEATAGNTGIGLACIGAA-RGYKVILVMPSTMSLERRIILRALGAEVHLTDQ 123 (323)
T ss_pred cEEEEeCCChHHHHHHHHHHH-cCCeEEEEeCCCCCHHHHHHHHHcCCEEEEECC
Confidence 457777777777766665432 34 34555655555666778889999999884
No 466
>cd00408 DHDPS-like Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stablilzes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.
Probab=30.36 E-value=1.3e+02 Score=27.90 Aligned_cols=58 Identities=14% Similarity=0.230 Sum_probs=0.0
Q ss_pred EEEecCCCCCCCCHHHHHHHhhc---CCceEEEEcCCCCCcCcCCCHHHHHHHHcC-------CCEEEE
Q 014492 194 VVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDEDLLKILEM-------PILVVL 252 (423)
Q Consensus 194 ~~~v~~~~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-------~~~li~ 252 (423)
....|.++++.+|.+.+++.++. ...+.|+ .+-++--+..++.+|.+++++. ++.||+
T Consensus 4 a~~TPf~~dg~iD~~~~~~~i~~l~~~Gv~gi~-~~GstGE~~~ls~~Er~~l~~~~~~~~~~~~~vi~ 71 (281)
T cd00408 4 ALVTPFTADGEVDLDALRRLVEFLIEAGVDGLV-VLGTTGEAPTLTDEERKEVIEAVVEAVAGRVPVIA 71 (281)
T ss_pred CeeCCcCCCCCcCHHHHHHHHHHHHHcCCCEEE-ECCCCcccccCCHHHHHHHHHHHHHHhCCCCeEEE
No 467
>PRK06841 short chain dehydrogenase; Provisional
Probab=30.14 E-value=4e+02 Score=23.73 Aligned_cols=100 Identities=14% Similarity=0.116 Sum_probs=48.3
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CC
Q 014492 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (423)
Q Consensus 144 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~ 218 (423)
++...+++|.++...=..+...|.+.|..|++...............+.++..++.|- -|.+++++.+.+ .+
T Consensus 13 ~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl---~~~~~~~~~~~~~~~~~~~ 89 (255)
T PRK06841 13 LSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDV---SDSQSVEAAVAAVISAFGR 89 (255)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecC---CCHHHHHHHHHHHHHHhCC
Confidence 3344566665544333445555778888877655443322222222344444555432 245555554432 25
Q ss_pred ceEEEEcCCCCCcC--cCCCHHHHHHHHcC
Q 014492 219 PKCIFLTSPNNPDG--SIINDEDLLKILEM 246 (423)
Q Consensus 219 ~~~i~l~~p~NPtG--~~~~~~~l~~i~~~ 246 (423)
...++-+....+.+ ...+.+++++..+.
T Consensus 90 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~ 119 (255)
T PRK06841 90 IDILVNSAGVALLAPAEDVSEEDWDKTIDI 119 (255)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 67777653222111 12345566555543
No 468
>PF00290 Trp_syntA: Tryptophan synthase alpha chain; InterPro: IPR002028 Tryptophan synthase (4.2.1.20 from EC) catalyzes the last step in the biosynthesis of tryptophan [, ]: L-serine + 1-(indol-3-yl)glycerol 3-phosphate = L-tryptophan + glyceraldehyde 3-phosphate + H2O It has two functional domains, each found in bacteria and plants on a separate subunit. In Escherichia coli, the 2 subunits, A and B, are encoded by the trpA and trpB genes respectively. The alpha chain is for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate and the beta chain IPR006653 from INTERPRO is for the synthesis of tryptophan from indole and serine. In fungi the two domains are fused together in a single multifunctional protein, in the order: (NH2-A-B-COOH) [, ]. The two domains of the Neurospora crassa polypeptide are linked by a connector of 54-amino acid residues that has less than 25% identity to the 45-residue connector of the Saccharomyces cerevisiae (Baker's yeast) polypeptide. Two acidic residues are believed to serve as proton donors/acceptors in the enzyme's catalytic mechanism.; GO: 0004834 tryptophan synthase activity, 0006568 tryptophan metabolic process; PDB: 1TJR_B 1RD5_B 1K8X_A 1QOQ_A 1KFE_A 1KFB_A 2CLO_A 1TTP_A 2RH9_A 1K7F_A ....
Probab=30.06 E-value=3.9e+02 Score=24.65 Aligned_cols=60 Identities=17% Similarity=0.114 Sum_probs=23.8
Q ss_pred CeEEEcCCCch---hhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcC
Q 014492 171 DKIVDCPPTFT---MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI 234 (423)
Q Consensus 171 d~Vl~~~p~y~---~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~ 234 (423)
|.+++++--+. .+...++..|..++.+-.+ .-..+.+++... .....||+.+-...||.-
T Consensus 117 dGlIipDLP~ee~~~~~~~~~~~gl~~I~lv~p---~t~~~Ri~~i~~-~a~gFiY~vs~~GvTG~~ 179 (259)
T PF00290_consen 117 DGLIIPDLPPEESEELREAAKKHGLDLIPLVAP---TTPEERIKKIAK-QASGFIYLVSRMGVTGSR 179 (259)
T ss_dssp EEEEETTSBGGGHHHHHHHHHHTT-EEEEEEET---TS-HHHHHHHHH-H-SSEEEEESSSSSSSTT
T ss_pred CEEEEcCCChHHHHHHHHHHHHcCCeEEEEECC---CCCHHHHHHHHH-hCCcEEEeeccCCCCCCc
Confidence 45555554332 3333344455554444311 112333433332 233445544444555543
No 469
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=29.93 E-value=4.1e+02 Score=23.77 Aligned_cols=97 Identities=13% Similarity=0.093 Sum_probs=50.3
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CCceE
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKC 221 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~ 221 (423)
..+++|.|+...=..+.+.|.+.|.+|++...............+.++..+..| --|.+.+++.+.+ .++..
T Consensus 7 ~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D---~~~~~~~~~~~~~~~~~~~~id~ 83 (257)
T PRK07067 7 KVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLD---VTRQDSIDRIVAAAVERFGGIDI 83 (257)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEcc---CCCHHHHHHHHHHHHHHcCCCCE
Confidence 356666655544455566677889888776655544444333334455555543 2345555554432 35677
Q ss_pred EEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 222 IFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 222 i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
++-+......+. -.+.+++++..+.
T Consensus 84 li~~ag~~~~~~~~~~~~~~~~~~~~~ 110 (257)
T PRK07067 84 LFNNAALFDMAPILDISRDSYDRLFAV 110 (257)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHh
Confidence 775532211121 2245556555443
No 470
>COG0036 Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]
Probab=29.89 E-value=3.4e+02 Score=24.31 Aligned_cols=58 Identities=19% Similarity=0.123 Sum_probs=30.5
Q ss_pred hhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEE-c-CCCCCcCcCCCHHHHHHHHc
Q 014492 182 MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFL-T-SPNNPDGSIINDEDLLKILE 245 (423)
Q Consensus 182 ~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l-~-~p~NPtG~~~~~~~l~~i~~ 245 (423)
......+..|++.=-+= ++ .-.++.++..+. +..+|.+ + ||.. .|+-+-.+-+++|.+
T Consensus 100 r~i~~Ik~~G~kaGv~l-nP--~Tp~~~i~~~l~--~vD~VllMsVnPGf-gGQ~Fi~~~l~Ki~~ 159 (220)
T COG0036 100 RTIQLIKELGVKAGLVL-NP--ATPLEALEPVLD--DVDLVLLMSVNPGF-GGQKFIPEVLEKIRE 159 (220)
T ss_pred HHHHHHHHcCCeEEEEE-CC--CCCHHHHHHHHh--hCCEEEEEeECCCC-cccccCHHHHHHHHH
Confidence 44455566676642221 11 223566666665 3443333 2 6655 577777666666654
No 471
>PRK06194 hypothetical protein; Provisional
Probab=29.80 E-value=4.3e+02 Score=24.07 Aligned_cols=97 Identities=13% Similarity=0.073 Sum_probs=49.8
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHH---HHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CC
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~ 218 (423)
..+++|.|+...=..+...|.+.|..|++..-.-....... ...|.++..+..|- -|.+.+++.+.. .+
T Consensus 7 k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~---~d~~~~~~~~~~~~~~~g~ 83 (287)
T PRK06194 7 KVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDV---SDAAQVEALADAALERFGA 83 (287)
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCC---CCHHHHHHHHHHHHHHcCC
Confidence 45666665543334555567788887776544322222222 22366676666442 345566555432 25
Q ss_pred ceEEEEcCCCCCcCcC--CCHHHHHHHHcC
Q 014492 219 PKCIFLTSPNNPDGSI--INDEDLLKILEM 246 (423)
Q Consensus 219 ~~~i~l~~p~NPtG~~--~~~~~l~~i~~~ 246 (423)
+..|+-+......|.. .+.+++.+..+.
T Consensus 84 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~ 113 (287)
T PRK06194 84 VHLLFNNAGVGAGGLVWENSLADWEWVLGV 113 (287)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhh
Confidence 6777755333222322 355666655554
No 472
>PRK11337 DNA-binding transcriptional repressor RpiR; Provisional
Probab=29.76 E-value=3.4e+02 Score=25.21 Aligned_cols=12 Identities=33% Similarity=0.454 Sum_probs=6.8
Q ss_pred EEEeCCHHHHHH
Q 014492 149 ILVGCGADELID 160 (423)
Q Consensus 149 i~~t~G~~~al~ 160 (423)
.+++.|++..+.
T Consensus 144 ~i~G~G~S~~~A 155 (292)
T PRK11337 144 DLYGAGGSAAIA 155 (292)
T ss_pred EEEEecHHHHHH
Confidence 356667665543
No 473
>TIGR00683 nanA N-acetylneuraminate lyase. N-acetylneuraminate lyase is also known as N-acetylneuraminic acid aldolase, sialic acid aldolase, or sialate lyase. It is an intracellular enzyme. The structure of this homotetrameric enzyme related to dihydrodipicolinate synthase is known. In Clostridium tertium, the enzyme appears to be in an operon with a secreted sialidase that releases sialic acid from host sialoglycoconjugates. In several E. coli strains, however, this enzyme is responsible for N-acetyl-D-neuraminic acid synthesis for capsule production by condensing N-acetyl-D-mannosamine and pyruvate.
Probab=29.69 E-value=3.2e+02 Score=25.58 Aligned_cols=87 Identities=16% Similarity=0.214 Sum_probs=48.5
Q ss_pred EEEeCC---HHHHHHHHHHHhcCCC-CeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcC-CceEEE
Q 014492 149 ILVGCG---ADELIDLIMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-KPKCIF 223 (423)
Q Consensus 149 i~~t~G---~~~al~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-~~~~i~ 223 (423)
|+++.| ..+++.++-. ..+-| |.|++..|.|...... + - .+-+.+..+.. +..+++
T Consensus 73 vi~gv~~~~t~~~i~la~~-a~~~Gad~v~v~~P~y~~~~~~---------------~-i--~~yf~~v~~~~~~lpv~l 133 (290)
T TIGR00683 73 LIAQVGSVNLKEAVELGKY-ATELGYDCLSAVTPFYYKFSFP---------------E-I--KHYYDTIIAETGGLNMIV 133 (290)
T ss_pred EEEecCCCCHHHHHHHHHH-HHHhCCCEEEEeCCcCCCCCHH---------------H-H--HHHHHHHHhhCCCCCEEE
Confidence 555543 4455544444 33345 8888888887532110 0 0 11122222212 344555
Q ss_pred EcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccC
Q 014492 224 LTSPNNPDGSIINDEDLLKILEM-PILVVLDEA 255 (423)
Q Consensus 224 l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Dea 255 (423)
-++|.. ||..++.+.+.+|++. ++.-|=|.+
T Consensus 134 Yn~P~~-tg~~l~~~~i~~L~~~pnv~giK~s~ 165 (290)
T TIGR00683 134 YSIPFL-TGVNMGIEQFGELYKNPKVLGVKFTA 165 (290)
T ss_pred EeCccc-cccCcCHHHHHHHhcCCCEEEEEeCC
Confidence 466654 8999999999999987 666666643
No 474
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=29.69 E-value=2.8e+02 Score=25.85 Aligned_cols=52 Identities=21% Similarity=0.089 Sum_probs=32.9
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCC--CeEEEcCCCchhhHHHHHHCCCeEEEecC
Q 014492 147 DHILVGCGADELIDLIMRCVLDPG--DKIVDCPPTFTMYEFDAAVNGAAVVKVPR 199 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~g--d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~ 199 (423)
..|+..+++..+..++..+- .-| -.|+++.-.-..-....+.+|++++.++.
T Consensus 54 ~~vv~~SsGN~g~alA~~a~-~~G~~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~ 107 (291)
T cd01561 54 TTIIEPTSGNTGIGLAMVAA-AKGYRFIIVMPETMSEEKRKLLRALGAEVILTPE 107 (291)
T ss_pred CEEEEeCCChHHHHHHHHHH-HcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 34666777777766555542 223 34555544445566777889999999984
No 475
>PF07179 SseB: SseB protein N-terminal domain; InterPro: IPR009839 This family consists of several SseB proteins, which appear to be found exclusively in Enterobacteria. SseB is known to enhance serine-sensitivity in Escherichia coli [] and is part of the Salmonella pathogenicity island 2 (SPI-2) translocon [].
Probab=29.63 E-value=71 Score=25.09 Aligned_cols=64 Identities=17% Similarity=0.329 Sum_probs=39.2
Q ss_pred CCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCC-CCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHH
Q 014492 169 PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDF-SLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243 (423)
Q Consensus 169 ~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~-~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i 243 (423)
.|...+ |.|.......+..+ .- ... .++.+++.+.+.+.+...|+| ||..+.|..++.+.++.|
T Consensus 60 dg~~~l---pvFTs~e~l~~~~~-~~------~~~~~~~~~~l~~~~~~~~~~givi-NP~~~~~~~l~~~~i~~l 124 (124)
T PF07179_consen 60 DGERYL---PVFTSWEELEKWYP-DE------RPIIVVPFEDLLEMLLNNEGDGIVI-NPGTPSGFVLPREEIEAL 124 (124)
T ss_pred CCCEEE---EEECCHHHHHhhhc-cc------CceecccHHHHHHHhhcCCCcEEEE-ECCCCceEEECHHHHhhC
Confidence 344443 55666666555443 10 111 456777877775334455654 788888899999998764
No 476
>PRK11557 putative DNA-binding transcriptional regulator; Provisional
Probab=29.59 E-value=4.2e+02 Score=24.34 Aligned_cols=14 Identities=36% Similarity=0.529 Sum_probs=6.9
Q ss_pred EEeCCHHHHHHHHH
Q 014492 150 LVGCGADELIDLIM 163 (423)
Q Consensus 150 ~~t~G~~~al~~~~ 163 (423)
+++.|.+..+..-+
T Consensus 133 i~G~G~s~~~A~~~ 146 (278)
T PRK11557 133 LTGIGASGLVAQNF 146 (278)
T ss_pred EEecChhHHHHHHH
Confidence 45556555443333
No 477
>PRK08339 short chain dehydrogenase; Provisional
Probab=29.56 E-value=4.3e+02 Score=23.93 Aligned_cols=97 Identities=10% Similarity=0.102 Sum_probs=46.3
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHH----HCCCeEEEecCCCCCCCCHHHHHHHhhc----CC
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA----VNGAAVVKVPRKSDFSLNVELIADAVER----EK 218 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~v~~~~~~~~d~~~l~~~i~~----~~ 218 (423)
..+++|.|+...=..+...|.+.|..|++..-.-.......+ ..+.++..+..|-. |.+++++.+.+ .+
T Consensus 9 k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~---~~~~i~~~~~~~~~~g~ 85 (263)
T PRK08339 9 KLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLT---KREDLERTVKELKNIGE 85 (263)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCC---CHHHHHHHHHHHHhhCC
Confidence 345555555433344555678889888765543332222221 12555555554322 34444444431 34
Q ss_pred ceEEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 219 PKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 219 ~~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
+..++.+.-....+. -.+.+++.+..+.
T Consensus 86 iD~lv~nag~~~~~~~~~~~~~~~~~~~~~ 115 (263)
T PRK08339 86 PDIFFFSTGGPKPGYFMEMSMEDWEGAVKL 115 (263)
T ss_pred CcEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 666654421111121 2456777666654
No 478
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=29.24 E-value=2.7e+02 Score=21.48 Aligned_cols=91 Identities=18% Similarity=0.227 Sum_probs=52.9
Q ss_pred EEeCCHHHHHHHHHHHhcCCCCe-EEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCC
Q 014492 150 LVGCGADELIDLIMRCVLDPGDK-IVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPN 228 (423)
Q Consensus 150 ~~t~G~~~al~~~~~~l~~~gd~-Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~ 228 (423)
+++.|...........-..++-. +.+.++.-......++.+|.. .+. | +++.+...++.+++++.|+
T Consensus 5 iiG~G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~~~--~~~-------~---~~~ll~~~~~D~V~I~tp~ 72 (120)
T PF01408_consen 5 IIGAGSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKYGIP--VYT-------D---LEELLADEDVDAVIIATPP 72 (120)
T ss_dssp EESTSHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTSE--EES-------S---HHHHHHHTTESEEEEESSG
T ss_pred EECCcHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHhccc--chh-------H---HHHHHHhhcCCEEEEecCC
Confidence 56666663333211111223433 446677666666667778877 222 2 3444444678999999887
Q ss_pred CCcCcCCCHHHHHHHHcCCCEEEEccCCc
Q 014492 229 NPDGSIINDEDLLKILEMPILVVLDEAYT 257 (423)
Q Consensus 229 NPtG~~~~~~~l~~i~~~~~~li~Deay~ 257 (423)
.- -.+-..+.++.|..++++=.-.
T Consensus 73 ~~-----h~~~~~~~l~~g~~v~~EKP~~ 96 (120)
T PF01408_consen 73 SS-----HAEIAKKALEAGKHVLVEKPLA 96 (120)
T ss_dssp GG-----HHHHHHHHHHTTSEEEEESSSS
T ss_pred cc-----hHHHHHHHHHcCCEEEEEcCCc
Confidence 42 3445666777788888886543
No 479
>PRK05717 oxidoreductase; Validated
Probab=29.08 E-value=3.6e+02 Score=24.15 Aligned_cols=76 Identities=13% Similarity=-0.012 Sum_probs=39.8
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CCceE
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKC 221 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~ 221 (423)
..+++|.|+...=..+...|.+.|.+|++............+..+.++..++.|- -|.+++++.+++ .++..
T Consensus 11 k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl---~~~~~~~~~~~~~~~~~g~id~ 87 (255)
T PRK05717 11 RVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDV---ADEAQVAAGVAEVLGQFGRLDA 87 (255)
T ss_pred CEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccC---CCHHHHHHHHHHHHHHhCCCCE
Confidence 4566666654444455666778887887765443323333333454555555432 244444433321 25677
Q ss_pred EEEc
Q 014492 222 IFLT 225 (423)
Q Consensus 222 i~l~ 225 (423)
++-+
T Consensus 88 li~~ 91 (255)
T PRK05717 88 LVCN 91 (255)
T ss_pred EEEC
Confidence 7755
No 480
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=28.82 E-value=4.6e+02 Score=24.05 Aligned_cols=141 Identities=11% Similarity=0.073 Sum_probs=70.9
Q ss_pred HHhCCCCCCeeEcCCC-CCCCCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHH-hCCCCCcEEEeCC-HHHHHHHHH
Q 014492 88 IQLGRKPEDIVKIDAN-ENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKD-SGLESDHILVGCG-ADELIDLIM 163 (423)
Q Consensus 88 ~~~~~~~~~~i~l~~~-~~~~~~~~~v~~al~~~-~~~~~Y~~~g~~~lr~~ia~~-~g~~~~~i~~t~G-~~~al~~~~ 163 (423)
+.+...+-|+|-++.- ..|..--|.+.++-... .. +..-...-++-+++++. ..++-......|- -..++...+
T Consensus 31 ~~l~~~Gad~iElGiPfsDP~aDGpvIq~a~~~al~~--G~~~~~~~~~v~~ir~~~~~~plv~m~Y~Npi~~~G~e~f~ 108 (256)
T TIGR00262 31 KTLIEAGADALELGVPFSDPLADGPTIQAADLRALRA--GMTPEKCFELLKKVRQKHPNIPIGLLTYYNLIFRKGVEEFY 108 (256)
T ss_pred HHHHHcCCCEEEECCCCCCCCCcCHHHHHHHHHHHHc--CCCHHHHHHHHHHHHhcCCCCCEEEEEeccHHhhhhHHHHH
Confidence 3344445666666642 12233346666554432 22 11111223444445543 3443232222221 122445555
Q ss_pred HHhcCCC-CeEEEcCCCch---hhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcC
Q 014492 164 RCVLDPG-DKIVDCPPTFT---MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI 234 (423)
Q Consensus 164 ~~l~~~g-d~Vl~~~p~y~---~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~ 234 (423)
..+.+.| |.|++++-.+. .+...++..|...+.+-.+ .-+.+.++.... .....|++.+.+.-||.-
T Consensus 109 ~~~~~aGvdgviipDlp~ee~~~~~~~~~~~gl~~i~lv~P---~T~~eri~~i~~-~~~gfiy~vs~~G~TG~~ 179 (256)
T TIGR00262 109 AKCKEVGVDGVLVADLPLEESGDLVEAAKKHGVKPIFLVAP---NADDERLKQIAE-KSQGFVYLVSRAGVTGAR 179 (256)
T ss_pred HHHHHcCCCEEEECCCChHHHHHHHHHHHHCCCcEEEEECC---CCCHHHHHHHHH-hCCCCEEEEECCCCCCCc
Confidence 6566666 77887765553 4555667789887644322 234677776665 334466665556778874
No 481
>PRK00109 Holliday junction resolvase-like protein; Reviewed
Probab=28.35 E-value=1.6e+02 Score=24.24 Aligned_cols=54 Identities=17% Similarity=0.242 Sum_probs=39.2
Q ss_pred CCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHH-HHHHHHc----C-CC-EEEEccCCc
Q 014492 204 SLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE-DLLKILE----M-PI-LVVLDEAYT 257 (423)
Q Consensus 204 ~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~-~l~~i~~----~-~~-~li~Deay~ 257 (423)
..+.+.|.+.+.+.++..|++--|-|+.|..-+.. .++++++ . ++ +..+||-|.
T Consensus 40 ~~~~~~l~~~i~~~~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~~v~~~DEr~T 100 (138)
T PRK00109 40 TPDWDRLEKLIKEWQPDGLVVGLPLNMDGTEGPRTERARKFANRLEGRFGLPVVLVDERLS 100 (138)
T ss_pred chHHHHHHHHHHHhCCCEEEEeccCCCCCCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCcC
Confidence 34688999999888999999999999999875532 2333333 2 44 567899887
No 482
>cd01137 PsaA Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=28.24 E-value=4.1e+02 Score=24.81 Aligned_cols=71 Identities=15% Similarity=0.177 Sum_probs=44.6
Q ss_pred CCeEEEcCCCchhhHHHHHHCCCeEEEec-CCCCCCCCHHHHHH---HhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHc
Q 014492 170 GDKIVDCPPTFTMYEFDAAVNGAAVVKVP-RKSDFSLNVELIAD---AVEREKPKCIFLTSPNNPDGSIINDEDLLKILE 245 (423)
Q Consensus 170 gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~-~~~~~~~d~~~l~~---~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~ 245 (423)
+..+++..|.|. ..++.+|.+++.+- ..++..+.+.+|.+ .+++.++++|+.. |+.+ ...++.|++
T Consensus 177 ~~~~v~~H~af~---Y~~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e-~~~~------~~~~~~ia~ 246 (287)
T cd01137 177 KRKLVTSEGAFS---YFAKAYGLKEAYLWPINTEEEGTPKQVATLIEQVKKEKVPAVFVE-STVN------DRLMKQVAK 246 (287)
T ss_pred cCEEEEecccHH---HHHHHcCCeEeecccCCCCCCCCHHHHHHHHHHHHHhCCCEEEEe-CCCC------hHHHHHHHH
Confidence 456777666654 56677999988754 33444566655554 5556789988854 3322 255677777
Q ss_pred C-CCEE
Q 014492 246 M-PILV 250 (423)
Q Consensus 246 ~-~~~l 250 (423)
. |+.+
T Consensus 247 ~~gv~v 252 (287)
T cd01137 247 ETGAKI 252 (287)
T ss_pred HhCCcc
Confidence 6 6654
No 483
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=28.15 E-value=2.1e+02 Score=24.94 Aligned_cols=98 Identities=18% Similarity=0.067 Sum_probs=54.0
Q ss_pred hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCc----------hhhHHHHHHCCCeEEEecCC
Q 014492 131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF----------TMYEFDAAVNGAAVVKVPRK 200 (423)
Q Consensus 131 ~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y----------~~~~~~~~~~g~~~~~v~~~ 200 (423)
+++..++|.+|....-.-.+.++|+..|-.+++.. ...||---+.+-.| .+|...++..|+....+-.-
T Consensus 105 ypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fgh-s~agdL~~lfsGyfDttiG~KrE~~SY~kIa~~iGl~p~eilFL 183 (229)
T COG4229 105 YPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGH-SDAGDLNSLFSGYFDTTIGKKRESQSYAKIAGDIGLPPAEILFL 183 (229)
T ss_pred CHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcc-cccccHHhhhcceeeccccccccchhHHHHHHhcCCCchheEEe
Confidence 56778888888643334456678888777777663 34454222222222 36777777777665554411
Q ss_pred CCCCCCHHHHHHHhhcCCceEEEEcCC-CCCcCc
Q 014492 201 SDFSLNVELIADAVEREKPKCIFLTSP-NNPDGS 233 (423)
Q Consensus 201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p-~NPtG~ 233 (423)
. -++++|.++-. ...+.+.+..| +.|++.
T Consensus 184 S---Dn~~EL~AA~~-vGl~t~l~~R~g~~P~~d 213 (229)
T COG4229 184 S---DNPEELKAAAG-VGLATGLAVRPGNAPVPD 213 (229)
T ss_pred c---CCHHHHHHHHh-cchheeeeecCCCCCCCC
Confidence 1 13566666543 34444444433 455554
No 484
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=27.90 E-value=4.3e+02 Score=23.35 Aligned_cols=97 Identities=13% Similarity=0.108 Sum_probs=48.4
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHC--CCeEEEecCCCCCCCCHHHHHHHhhc-----CCc
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVN--GAAVVKVPRKSDFSLNVELIADAVER-----EKP 219 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~--g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~ 219 (423)
..+++|.|+...=..+...|++.|..|++..-.-.......... +.++..+..| -.|.+.+.+.+.+ .++
T Consensus 6 ~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D---~~~~~~~~~~~~~~~~~~~~~ 82 (251)
T PRK07231 6 KVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAAD---VSDEADVEAAVAAALERFGSV 82 (251)
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECC---CCCHHHHHHHHHHHHHHhCCC
Confidence 45666655544444456667778877765543332222222211 3455555543 3456666655432 356
Q ss_pred eEEEEcCCCCCcCc---CCCHHHHHHHHcC
Q 014492 220 KCIFLTSPNNPDGS---IINDEDLLKILEM 246 (423)
Q Consensus 220 ~~i~l~~p~NPtG~---~~~~~~l~~i~~~ 246 (423)
..|+.+...++.+. -.+.+.+++..+.
T Consensus 83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~ 112 (251)
T PRK07231 83 DILVNNAGTTHRNGPLLDVDEAEFDRIFAV 112 (251)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHhh
Confidence 77776643322222 2345555555543
No 485
>KOG4132 consensus Uroporphyrinogen III synthase UROS/HEM4 [Coenzyme transport and metabolism]
Probab=27.81 E-value=86 Score=28.12 Aligned_cols=49 Identities=22% Similarity=0.247 Sum_probs=36.9
Q ss_pred chhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-CCceEEEEcCCC
Q 014492 180 FTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTSPN 228 (423)
Q Consensus 180 y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~~i~l~~p~ 228 (423)
...|...++.+|.+.+.||.-.-...++++|.+.+.+ ++...||+++|-
T Consensus 16 ~D~Y~~~l~~~~~epifIP~l~f~f~~l~~lr~kL~~p~kY~giIfTSpR 65 (260)
T KOG4132|consen 16 IDPYEEELRSYGLEPIFIPVLSFTFVNLQQLRAKLNNPPKYAGIIFTSPR 65 (260)
T ss_pred CCHHHHHHHhcCCCceeecceeeeeccHHHHHHHhcCchhhceeEEeChH
Confidence 4589999999999999999544335679999998864 345567767663
No 486
>PRK03170 dihydrodipicolinate synthase; Provisional
Probab=27.79 E-value=1.6e+02 Score=27.50 Aligned_cols=58 Identities=12% Similarity=0.248 Sum_probs=0.0
Q ss_pred EEEecCCCCCCCCHHHHHHHhhc---CCceEEEEcCCCCCcCcCCCHHHHHHHHcC-------CCEEEE
Q 014492 194 VVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDEDLLKILEM-------PILVVL 252 (423)
Q Consensus 194 ~~~v~~~~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-------~~~li~ 252 (423)
...-|.++++.+|.+.+++.++. ...+.++++.-.- -+..++.+|..++++. ++.|+.
T Consensus 8 ~~~TPf~~dg~iD~~~l~~~i~~l~~~Gv~gi~~~Gs~G-E~~~ls~~Er~~~~~~~~~~~~~~~~vi~ 75 (292)
T PRK03170 8 ALVTPFKEDGSVDFAALRKLVDYLIANGTDGLVVVGTTG-ESPTLTHEEHEELIRAVVEAVNGRVPVIA 75 (292)
T ss_pred eeeCCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECCcCC-ccccCCHHHHHHHHHHHHHHhCCCCcEEe
No 487
>PHA02678 hypothetical protein; Provisional
Probab=27.78 E-value=1e+02 Score=22.86 Aligned_cols=73 Identities=15% Similarity=0.227 Sum_probs=42.0
Q ss_pred CCeEEEcCCC--chhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-
Q 014492 170 GDKIVDCPPT--FTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM- 246 (423)
Q Consensus 170 gd~Vl~~~p~--y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~- 246 (423)
.+++++-.|+ |+.. .-....+.+..|..+...++ + .+. ...+.|.+.||+ ..+|..++.-
T Consensus 5 DnTlIVy~~g~~WP~~---L~~~~gk~l~fps~nS~tf~--~---~I~-~d~~svLLVNPT--------~~qLl~~~~~~ 67 (89)
T PHA02678 5 SDTVIVAVPGTRFPEG---LFDRQGRPLGPGSTPTMEYE--D---SVP-RDARALLLVNPT--------AGQLAAVAAGA 67 (89)
T ss_pred CCeEEEeecCCCCCcc---eEcCCCCCcCCCCCCceeec--c---ccC-cccceEEEECCC--------HHHHHHhhcCC
Confidence 3566665444 5521 11134566666644443333 2 444 577888888776 3456666553
Q ss_pred ----CCEEEEccCCccc
Q 014492 247 ----PILVVLDEAYTEF 259 (423)
Q Consensus 247 ----~~~li~Deay~~~ 259 (423)
.+++++|-.|.+.
T Consensus 68 ~~~~~~~~~~~~~~~~~ 84 (89)
T PHA02678 68 PAGVRVLVLVDVARCDM 84 (89)
T ss_pred CCCcEEEEEEEeeeecC
Confidence 5688899988754
No 488
>PRK11070 ssDNA exonuclease RecJ; Provisional
Probab=27.72 E-value=7.2e+02 Score=25.98 Aligned_cols=94 Identities=17% Similarity=0.250 Sum_probs=54.4
Q ss_pred eCCHHHHHHHHHHHhcCCCCeEEEcCCCc-h------hhHHHHHHCCC-eE-EEec--CCCCCCCCHHHHHHHhhcCCce
Q 014492 152 GCGADELIDLIMRCVLDPGDKIVDCPPTF-T------MYEFDAAVNGA-AV-VKVP--RKSDFSLNVELIADAVEREKPK 220 (423)
Q Consensus 152 t~G~~~al~~~~~~l~~~gd~Vl~~~p~y-~------~~~~~~~~~g~-~~-~~v~--~~~~~~~d~~~l~~~i~~~~~~ 220 (423)
-.+...+...+..++. .+.+|++..-.- . ......+..|+ .+ ..+| ..++++++.+.+++... ..++
T Consensus 52 l~~m~~a~~ri~~ai~-~~e~I~I~gDyD~DGitstail~~~L~~~g~~~~~~~IP~R~~eGYGl~~~~i~~~~~-~~~~ 129 (575)
T PRK11070 52 LSGIEKAVELLYNALR-EGTRIIVVGDFDADGATSTALSVLALRSLGCSNVDYLVPNRFEDGYGLSPEVVDQAHA-RGAQ 129 (575)
T ss_pred hhCHHHHHHHHHHHHH-CCCEEEEEEecCccHHHHHHHHHHHHHHcCCCceEEEeCCCCcCCCCCCHHHHHHHHh-cCCC
Confidence 3667777777777554 345555433211 1 12233455676 34 4566 46788899888888765 4677
Q ss_pred EEEEcCCCCCcCcCCCHHHHHHHHcCCCEEEE
Q 014492 221 CIFLTSPNNPDGSIINDEDLLKILEMPILVVL 252 (423)
Q Consensus 221 ~i~l~~p~NPtG~~~~~~~l~~i~~~~~~li~ 252 (423)
+|+.+- | |.. +.++++...+.|+-+|+
T Consensus 130 LiItvD--~--Gi~-~~e~i~~a~~~gidvIV 156 (575)
T PRK11070 130 LIVTVD--N--GIS-SHAGVAHAHALGIPVLV 156 (575)
T ss_pred EEEEEc--C--CcC-CHHHHHHHHHCCCCEEE
Confidence 777653 2 222 56666666666654443
No 489
>PRK07478 short chain dehydrogenase; Provisional
Probab=27.66 E-value=4.2e+02 Score=23.61 Aligned_cols=97 Identities=10% Similarity=0.037 Sum_probs=48.1
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHH---HHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CC
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~ 218 (423)
..+++|.|+...=..+.+.|.+.|..|++..-.-...... .+..|.++..++.|- -|.+.+++.+++ .+
T Consensus 7 k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~~~ 83 (254)
T PRK07478 7 KVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDV---RDEAYAKALVALAVERFGG 83 (254)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCC---CCHHHHHHHHHHHHHhcCC
Confidence 3566665544333444556778888877654332222222 223456666666542 245555544431 25
Q ss_pred ceEEEEcCCC-CCcCc--CCCHHHHHHHHcC
Q 014492 219 PKCIFLTSPN-NPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 219 ~~~i~l~~p~-NPtG~--~~~~~~l~~i~~~ 246 (423)
+..++.+... .+.+. ..+.+++.+..+.
T Consensus 84 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~ 114 (254)
T PRK07478 84 LDIAFNNAGTLGEMGPVAEMSLEGWRETLAT 114 (254)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHH
Confidence 6777655322 12222 2345566655553
No 490
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=27.49 E-value=3.4e+02 Score=24.44 Aligned_cols=76 Identities=24% Similarity=0.259 Sum_probs=37.9
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CCceE
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKC 221 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~ 221 (423)
..+++|.|+...=..+.+.|.+.|.+|++..-.-..........+.++..++.|- -|.+.+.+.+.+ .++..
T Consensus 6 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~g~id~ 82 (262)
T TIGR03325 6 EVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDV---RSLDDHKEAVARCVAAFGKIDC 82 (262)
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEecc---CCHHHHHHHHHHHHHHhCCCCE
Confidence 4566655544333445556788898887754333222333233354555555332 234444443321 35666
Q ss_pred EEEc
Q 014492 222 IFLT 225 (423)
Q Consensus 222 i~l~ 225 (423)
++-+
T Consensus 83 li~~ 86 (262)
T TIGR03325 83 LIPN 86 (262)
T ss_pred EEEC
Confidence 6644
No 491
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=27.40 E-value=2.8e+02 Score=25.69 Aligned_cols=92 Identities=15% Similarity=0.238 Sum_probs=56.8
Q ss_pred HHHHHHHHhcCCC-CeEEEcCCCch---hhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCc
Q 014492 158 LIDLIMRCVLDPG-DKIVDCPPTFT---MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS 233 (423)
Q Consensus 158 al~~~~~~l~~~g-d~Vl~~~p~y~---~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~ 233 (423)
+++..+..+.+.| |.|++++--+. .+...++.+|...+.+-.+. -+.+.++...+ .....||+.+....||.
T Consensus 107 G~e~F~~~~~~aGvdgviipDLP~ee~~~~~~~~~~~gi~~I~lv~Pt---T~~eri~~i~~-~a~gFIY~vS~~GvTG~ 182 (263)
T CHL00200 107 GINKFIKKISQAGVKGLIIPDLPYEESDYLISVCNLYNIELILLIAPT---SSKSRIQKIAR-AAPGCIYLVSTTGVTGL 182 (263)
T ss_pred CHHHHHHHHHHcCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEEECCC---CCHHHHHHHHH-hCCCcEEEEcCCCCCCC
Confidence 4455566566666 88888876664 55567788899887765322 24567776665 34457777677778997
Q ss_pred CCC-HHHHHHHHcC-----CCEEEEc
Q 014492 234 IIN-DEDLLKILEM-----PILVVLD 253 (423)
Q Consensus 234 ~~~-~~~l~~i~~~-----~~~li~D 253 (423)
--. .+++.++.+. +..+.+|
T Consensus 183 ~~~~~~~~~~~i~~ir~~t~~Pi~vG 208 (263)
T CHL00200 183 KTELDKKLKKLIETIKKMTNKPIILG 208 (263)
T ss_pred CccccHHHHHHHHHHHHhcCCCEEEE
Confidence 422 2334444432 6666654
No 492
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=27.36 E-value=2.4e+02 Score=28.63 Aligned_cols=75 Identities=17% Similarity=0.212 Sum_probs=44.8
Q ss_pred CCCcEEEeCCHHHH---------------HHHHHHHhcCCCCeEEEcCCCchhhHH-----HHHHCCCeEEEecCCCCCC
Q 014492 145 ESDHILVGCGADEL---------------IDLIMRCVLDPGDKIVDCPPTFTMYEF-----DAAVNGAAVVKVPRKSDFS 204 (423)
Q Consensus 145 ~~~~i~~t~G~~~a---------------l~~~~~~l~~~gd~Vl~~~p~y~~~~~-----~~~~~g~~~~~v~~~~~~~ 204 (423)
++-+|.+|+|++.. +....+.=.+..+.+.++.|-|+.+.. .+-..|+.++.-. -.
T Consensus 235 d~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~g~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~----~~ 310 (596)
T KOG1177|consen 235 DAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARAGYNEKHRICIPNPLYHCFGCVLGVMAALMHGATIVFPA----PS 310 (596)
T ss_pred CceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHhCcCcceEEEecCchHHHHHHHHHHHHHHHhCcEEEeeC----CC
Confidence 34489999998753 212222113333577889999975442 2334677776622 25
Q ss_pred CCHHHHHHHhhcCCceEEE
Q 014492 205 LNVELIADAVEREKPKCIF 223 (423)
Q Consensus 205 ~d~~~l~~~i~~~~~~~i~ 223 (423)
+|+.+..+++.+++...++
T Consensus 311 f~~k~alqai~~ekcT~l~ 329 (596)
T KOG1177|consen 311 FDPKDALQAISNEKCTTLY 329 (596)
T ss_pred CChHHHHHHHHhhceEEEe
Confidence 6777777777766655544
No 493
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=27.30 E-value=4.5e+02 Score=23.44 Aligned_cols=98 Identities=6% Similarity=0.024 Sum_probs=49.5
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHH---HHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----
Q 014492 145 ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF---DAAVNGAAVVKVPRKSDFSLNVELIADAVER----- 216 (423)
Q Consensus 145 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~----- 216 (423)
+...+++|.|+...=..+...|++.|-+|++....-..... ..+..|.++..+..|- -|.+.+++.+.+
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~ 85 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDV---TDHDAVRAAIDAFEAEI 85 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccC---CCHHHHHHHHHHHHHhc
Confidence 33567777665544445556677888888765443222222 2223466676666542 244555554432
Q ss_pred CCceEEEEcCCCCCcCc--CCCHHHHHHHHc
Q 014492 217 EKPKCIFLTSPNNPDGS--IINDEDLLKILE 245 (423)
Q Consensus 217 ~~~~~i~l~~p~NPtG~--~~~~~~l~~i~~ 245 (423)
.+++.++.+....+.+. ..+.+++++..+
T Consensus 86 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~ 116 (255)
T PRK07523 86 GPIDILVNNAGMQFRTPLEDFPADAFERLLR 116 (255)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 24667765532222221 234555555444
No 494
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=27.21 E-value=4.8e+02 Score=23.69 Aligned_cols=78 Identities=12% Similarity=0.066 Sum_probs=40.3
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHH---HHCCCeEEEecCCCCCCCCHHHHHHHhhc-----
Q 014492 145 ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVER----- 216 (423)
Q Consensus 145 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~d~~~l~~~i~~----- 216 (423)
+...+++|.|+...=..+...|.+.|..|++....-....... +..|.++..+..|-. |.+.+.+.+.+
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~---~~~~v~~~~~~~~~~~ 85 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVL---DKESLEQARQQILEDF 85 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCC---CHHHHHHHHHHHHHHc
Confidence 3345666665544435555667788887776554332222222 224566666665422 34444443321
Q ss_pred CCceEEEEc
Q 014492 217 EKPKCIFLT 225 (423)
Q Consensus 217 ~~~~~i~l~ 225 (423)
.++..++-+
T Consensus 86 g~id~li~~ 94 (278)
T PRK08277 86 GPCDILING 94 (278)
T ss_pred CCCCEEEEC
Confidence 356777655
No 495
>COG0656 ARA1 Aldo/keto reductases, related to diketogulonate reductase [General function prediction only]
Probab=27.16 E-value=5.2e+02 Score=24.16 Aligned_cols=22 Identities=14% Similarity=0.412 Sum_probs=17.1
Q ss_pred hHHHHHHHHHHhCCCCCcEEEeC
Q 014492 131 SRRLRAALAKDSGLESDHILVGC 153 (423)
Q Consensus 131 ~~~lr~~ia~~~g~~~~~i~~t~ 153 (423)
.+.+-++|++ .|++.+++++|+
T Consensus 54 E~~VG~aI~~-s~v~ReelFitt 75 (280)
T COG0656 54 EEEVGEAIKE-SGVPREELFITT 75 (280)
T ss_pred HHHHHHHHHh-cCCCHHHeEEEe
Confidence 3567788888 778778999886
No 496
>cd01017 AdcA Metal binding protein AcdA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AcdA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).
Probab=26.97 E-value=4.1e+02 Score=24.63 Aligned_cols=72 Identities=14% Similarity=0.181 Sum_probs=44.6
Q ss_pred CCCeEEEcCCCchhhHHHHHHCCCeEEEec-CCCCCCCCHHHHH---HHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHH
Q 014492 169 PGDKIVDCPPTFTMYEFDAAVNGAAVVKVP-RKSDFSLNVELIA---DAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL 244 (423)
Q Consensus 169 ~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~-~~~~~~~d~~~l~---~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~ 244 (423)
++..+++..|.|. ..++.+|.+++.+. ..++..+.+..|. +.+++.++++|+...-.+ ....+.|+
T Consensus 170 ~~~~~v~~H~af~---Y~~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~-------~~~~~~la 239 (282)
T cd01017 170 KGKTFVTQHAAFG---YLARRYGLKQIAIVGVSPEVEPSPKQLAELVEFVKKSDVKYIFFEENAS-------SKIAETLA 239 (282)
T ss_pred CCCeEEEecccHH---HHHHHCCCeEEecccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCC-------hHHHHHHH
Confidence 3566777766664 56677999988764 3344456555554 455667899888653222 24456677
Q ss_pred cC-CCEE
Q 014492 245 EM-PILV 250 (423)
Q Consensus 245 ~~-~~~l 250 (423)
+. |+.+
T Consensus 240 ~~~g~~v 246 (282)
T cd01017 240 KETGAKL 246 (282)
T ss_pred HHcCCcE
Confidence 65 6544
No 497
>PRK06114 short chain dehydrogenase; Provisional
Probab=26.93 E-value=4.6e+02 Score=23.42 Aligned_cols=101 Identities=10% Similarity=0.099 Sum_probs=49.6
Q ss_pred CCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCC-chhhH---HHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc--
Q 014492 143 GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT-FTMYE---FDAAVNGAAVVKVPRKSDFSLNVELIADAVER-- 216 (423)
Q Consensus 143 g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~-y~~~~---~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-- 216 (423)
.++...+++|.|+...=..+...|.+.|..|++.... -.... ...+..+.++..++.|- -|.+.+++.+.+
T Consensus 5 ~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~---~~~~~i~~~~~~~~ 81 (254)
T PRK06114 5 DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADV---TSKADLRAAVARTE 81 (254)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCC---CCHHHHHHHHHHHH
Confidence 3444566666655544455556677888777665432 11112 22233455666666442 244555544432
Q ss_pred ---CCceEEEEcCC-CCCc-CcCCCHHHHHHHHcC
Q 014492 217 ---EKPKCIFLTSP-NNPD-GSIINDEDLLKILEM 246 (423)
Q Consensus 217 ---~~~~~i~l~~p-~NPt-G~~~~~~~l~~i~~~ 246 (423)
.++..++.+.. .++. -...+.+++.+..+.
T Consensus 82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~ 116 (254)
T PRK06114 82 AELGALTLAVNAAGIANANPAEEMEEEQWQTVMDI 116 (254)
T ss_pred HHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhh
Confidence 34666665422 2211 122355666665554
No 498
>PRK12564 carbamoyl phosphate synthase small subunit; Reviewed
Probab=26.82 E-value=2.5e+02 Score=27.35 Aligned_cols=55 Identities=25% Similarity=0.314 Sum_probs=36.2
Q ss_pred CCeEEEcCCCc-hhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEc-CCCCCcC
Q 014492 170 GDKIVDCPPTF-TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNNPDG 232 (423)
Q Consensus 170 gd~Vl~~~p~y-~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~-~p~NPtG 232 (423)
+.+|++.+-.. ..+.+..+..|++++.+|.+ .+++++.. .++..|+++ .|.+|..
T Consensus 177 ~~~I~viD~G~k~nivr~L~~~G~~v~vvp~~----~~~~~i~~----~~~DGIvLSgGPgdp~~ 233 (360)
T PRK12564 177 KYKVVAIDFGVKRNILRELAERGCRVTVVPAT----TTAEEILA----LNPDGVFLSNGPGDPAA 233 (360)
T ss_pred CCEEEEEeCCcHHHHHHHHHHCCCEEEEEeCC----CCHHHHHh----cCCCEEEEeCCCCChHH
Confidence 34677766554 35666777789999999853 24555533 357788887 5777743
No 499
>PRK06139 short chain dehydrogenase; Provisional
Probab=26.69 E-value=3.7e+02 Score=25.62 Aligned_cols=95 Identities=11% Similarity=0.106 Sum_probs=47.6
Q ss_pred CcEEEeCCHHHHHH-HHHHHhcCCCCeEEEcCCCchhhH---HHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----C
Q 014492 147 DHILVGCGADELID-LIMRCVLDPGDKIVDCPPTFTMYE---FDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----E 217 (423)
Q Consensus 147 ~~i~~t~G~~~al~-~~~~~l~~~gd~Vl~~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~ 217 (423)
..+++|.+ +.++. .+...|.+.|..|++..-.-.... ..++..|.++..++.|- -|.+++++.+++ .
T Consensus 8 k~vlITGA-s~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv---~d~~~v~~~~~~~~~~~g 83 (330)
T PRK06139 8 AVVVITGA-SSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDV---TDADQVKALATQAASFGG 83 (330)
T ss_pred CEEEEcCC-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeC---CCHHHHHHHHHHHHHhcC
Confidence 34555544 44554 444557788888776544333222 22334577776666542 245555554431 3
Q ss_pred CceEEEEcCCCCCcCcC--CCHHHHHHHHc
Q 014492 218 KPKCIFLTSPNNPDGSI--INDEDLLKILE 245 (423)
Q Consensus 218 ~~~~i~l~~p~NPtG~~--~~~~~l~~i~~ 245 (423)
++..++-+......|.. .+.++++++.+
T Consensus 84 ~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~ 113 (330)
T PRK06139 84 RIDVWVNNVGVGAVGRFEETPIEAHEQVIQ 113 (330)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 56766655322222322 24455555444
No 500
>PRK05752 uroporphyrinogen-III synthase; Validated
Probab=26.64 E-value=1e+02 Score=28.22 Aligned_cols=60 Identities=10% Similarity=0.018 Sum_probs=37.0
Q ss_pred CCeEEEcCCCch--hhHHHHHHCCCeEEEecCC-CCCCCCHHHHHHHhhc-CCceEEEEcCCCC
Q 014492 170 GDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVER-EKPKCIFLTSPNN 229 (423)
Q Consensus 170 gd~Vl~~~p~y~--~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~-~~~~~i~l~~p~N 229 (423)
|.+|++..|.-. .....++..|.+++.+|+- -....+.+.+...+.+ .+...|+++++|-
T Consensus 3 g~~vlvTRp~~~~~~l~~~l~~~G~~~~~~P~i~i~p~~~~~~~~~~l~~l~~~d~iifTS~na 66 (255)
T PRK05752 3 GWRLLLTRPAEECAALAASLAEAGIFSSSLPLLAIEPLPETPEQRALLLELDRYCAVIVVSKPA 66 (255)
T ss_pred CCEEEECCcHHHHHHHHHHHHHcCCCEEEcCcEEEeeCCCCHHHHHHHhcCCCCCEEEEECHHH
Confidence 678999888775 4555667789999999831 1111122334333322 3567888888764
Done!