Query 014492
Match_columns 423
No_of_seqs 319 out of 2797
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 12:33:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014492.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014492hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ffh_A Histidinol-phosphate am 100.0 2.2E-49 7.6E-54 385.0 40.1 350 68-422 7-362 (363)
2 1fg7_A Histidinol phosphate am 100.0 1E-49 3.5E-54 386.8 34.6 339 66-423 9-355 (356)
3 3get_A Histidinol-phosphate am 100.0 2.5E-49 8.4E-54 385.0 36.7 348 68-422 5-363 (365)
4 3ly1_A Putative histidinol-pho 100.0 1.2E-47 4.2E-52 371.3 37.1 326 93-422 14-348 (354)
5 3hdo_A Histidinol-phosphate am 100.0 2.3E-47 7.7E-52 370.6 36.1 341 66-422 5-351 (360)
6 3euc_A Histidinol-phosphate am 100.0 1.1E-46 3.9E-51 366.5 34.8 341 65-422 12-364 (367)
7 3p1t_A Putative histidinol-pho 100.0 2.2E-46 7.5E-51 359.9 34.2 318 93-422 14-333 (337)
8 1lc5_A COBD, L-threonine-O-3-p 100.0 5.4E-46 1.8E-50 361.5 35.9 344 74-422 3-356 (364)
9 1b5p_A Protein (aspartate amin 100.0 1.5E-46 5.3E-51 368.2 31.9 326 93-422 29-378 (385)
10 3ftb_A Histidinol-phosphate am 100.0 1.6E-45 5.6E-50 357.2 34.7 323 93-422 24-357 (361)
11 3fkd_A L-threonine-O-3-phospha 100.0 3.7E-45 1.3E-49 353.6 31.4 316 94-422 14-338 (350)
12 1uu1_A Histidinol-phosphate am 100.0 3.1E-45 1.1E-49 352.1 30.2 309 95-422 19-334 (335)
13 3cq5_A Histidinol-phosphate am 100.0 1.7E-44 5.9E-49 351.6 33.4 319 98-422 33-364 (369)
14 3h14_A Aminotransferase, class 100.0 1.8E-44 6.1E-49 354.0 30.4 334 83-422 19-375 (391)
15 3jtx_A Aminotransferase; NP_28 100.0 1.5E-44 5E-49 355.0 29.6 326 92-422 27-391 (396)
16 2dou_A Probable N-succinyldiam 100.0 6E-44 2.1E-48 348.4 32.1 326 92-422 22-371 (376)
17 3ezs_A Aminotransferase ASPB; 100.0 8.6E-44 2.9E-48 347.1 28.7 318 93-422 22-368 (376)
18 2x5d_A Probable aminotransfera 100.0 1.8E-43 6E-48 349.5 30.2 333 87-422 29-391 (412)
19 2o1b_A Aminotransferase, class 100.0 2.2E-43 7.4E-48 348.1 29.9 327 93-422 45-396 (404)
20 3b46_A Aminotransferase BNA3; 100.0 3E-43 1E-47 351.6 30.7 327 93-422 55-440 (447)
21 1o4s_A Aspartate aminotransfer 100.0 9.8E-43 3.4E-47 341.6 33.6 323 93-422 39-382 (389)
22 1j32_A Aspartate aminotransfer 100.0 7.4E-43 2.5E-47 342.1 32.7 349 70-422 6-380 (388)
23 1u08_A Hypothetical aminotrans 100.0 1.7E-42 5.7E-47 339.4 34.3 325 95-423 30-384 (386)
24 1gd9_A Aspartate aminotransfer 100.0 1.8E-42 6.2E-47 339.4 34.2 325 95-422 26-379 (389)
25 3dyd_A Tyrosine aminotransfera 100.0 7.9E-43 2.7E-47 346.6 30.9 327 93-422 52-417 (427)
26 3aow_A Putative uncharacterize 100.0 5.9E-43 2E-47 349.4 29.8 325 95-422 76-438 (448)
27 2z61_A Probable aspartate amin 100.0 8.6E-43 2.9E-47 339.5 30.2 318 93-422 27-364 (370)
28 3ele_A Amino transferase; RER0 100.0 1.2E-42 4E-47 341.8 31.1 320 95-422 35-389 (398)
29 1c7n_A Cystalysin; transferase 100.0 3.7E-42 1.3E-46 338.3 32.2 333 87-422 23-386 (399)
30 3g0t_A Putative aminotransfera 100.0 9E-43 3.1E-47 346.8 27.8 326 94-421 43-432 (437)
31 3fdb_A Beta C-S lyase, putativ 100.0 8.1E-43 2.8E-47 340.2 26.4 327 89-422 17-369 (377)
32 1iay_A ACC synthase 2, 1-amino 100.0 4.1E-42 1.4E-46 341.4 31.5 325 95-421 36-422 (428)
33 1xi9_A Putative transaminase; 100.0 1.2E-42 4.1E-47 342.9 27.2 333 86-422 29-396 (406)
34 3dzz_A Putative pyridoxal 5'-p 100.0 1E-41 3.4E-46 334.0 33.0 330 90-422 22-382 (391)
35 3e2y_A Kynurenine-oxoglutarate 100.0 2.9E-42 9.9E-47 340.2 29.3 325 95-422 23-406 (410)
36 1v2d_A Glutamine aminotransfer 100.0 6.1E-42 2.1E-46 334.8 31.0 319 96-422 26-364 (381)
37 3fvs_A Kynurenine--oxoglutarat 100.0 1.8E-42 6.1E-47 343.1 27.5 325 95-422 28-415 (422)
38 3kax_A Aminotransferase, class 100.0 2E-41 6.7E-46 331.0 34.4 326 94-422 23-378 (383)
39 1yiz_A Kynurenine aminotransfe 100.0 6.3E-42 2.1E-46 340.1 31.1 325 95-422 37-422 (429)
40 3k7y_A Aspartate aminotransfer 100.0 5.6E-42 1.9E-46 337.0 29.3 324 83-421 16-400 (405)
41 3qgu_A LL-diaminopimelate amin 100.0 2.3E-42 7.7E-47 345.4 25.7 320 93-422 67-433 (449)
42 3d6k_A Putative aminotransfera 100.0 4.2E-42 1.4E-46 340.8 27.0 321 97-420 34-412 (422)
43 2zyj_A Alpha-aminodipate amino 100.0 6.1E-42 2.1E-46 336.8 27.5 325 95-422 32-386 (397)
44 1bw0_A TAT, protein (tyrosine 100.0 1.3E-41 4.5E-46 336.3 29.6 325 95-422 33-406 (416)
45 2x5f_A Aspartate_tyrosine_phen 100.0 1E-41 3.6E-46 338.7 28.7 320 95-420 47-423 (430)
46 1d2f_A MALY protein; aminotran 100.0 3E-41 1E-45 331.0 31.4 324 95-422 28-382 (390)
47 2r2n_A Kynurenine/alpha-aminoa 100.0 1.5E-41 5.3E-46 337.1 29.5 347 66-422 6-417 (425)
48 2gb3_A Aspartate aminotransfer 100.0 2.5E-41 8.6E-46 333.8 30.1 348 68-422 17-395 (409)
49 4dq6_A Putative pyridoxal phos 100.0 1.2E-40 4.1E-45 326.3 33.8 330 86-422 25-386 (391)
50 1vp4_A Aminotransferase, putat 100.0 8.8E-42 3E-46 338.8 24.2 325 95-422 43-411 (425)
51 3ei9_A LL-diaminopimelate amin 100.0 2.1E-41 7.2E-46 336.7 26.7 319 94-422 55-421 (432)
52 2o0r_A RV0858C (N-succinyldiam 100.0 2.7E-41 9.3E-46 333.7 26.7 323 96-422 26-389 (411)
53 2zc0_A Alanine glyoxylate tran 100.0 4E-41 1.4E-45 331.9 27.3 325 93-420 32-398 (407)
54 3nra_A Aspartate aminotransfer 100.0 5.9E-41 2E-45 330.4 27.0 325 95-422 39-398 (407)
55 3rq1_A Aminotransferase class 100.0 2.5E-40 8.7E-45 327.4 31.5 318 95-421 38-407 (418)
56 3t18_A Aminotransferase class 100.0 1.6E-40 5.6E-45 328.2 28.8 319 95-421 37-409 (413)
57 3l8a_A METC, putative aminotra 100.0 5.7E-40 1.9E-44 325.4 30.2 326 94-422 60-415 (421)
58 3piu_A 1-aminocyclopropane-1-c 100.0 3.6E-40 1.2E-44 328.1 28.6 327 94-422 37-425 (435)
59 3ppl_A Aspartate aminotransfer 100.0 2.7E-40 9.3E-45 328.2 25.3 323 96-422 34-413 (427)
60 3op7_A Aminotransferase class 100.0 1.3E-39 4.6E-44 317.4 29.2 306 111-422 46-364 (375)
61 3asa_A LL-diaminopimelate amin 100.0 3.7E-40 1.3E-44 324.5 25.3 317 94-422 32-386 (400)
62 4f4e_A Aromatic-amino-acid ami 100.0 2.1E-39 7.1E-44 321.2 30.3 316 94-421 48-417 (420)
63 3fsl_A Aromatic-amino-acid ami 100.0 4.9E-39 1.7E-43 315.8 31.5 327 83-421 13-395 (397)
64 3ez1_A Aminotransferase MOCR f 100.0 1.7E-39 5.8E-44 322.0 26.8 323 96-422 26-408 (423)
65 3bwn_A AT1G70560, L-tryptophan 100.0 3.1E-40 1.1E-44 324.1 19.4 306 93-422 20-380 (391)
66 3b1d_A Betac-S lyase; HET: PLP 100.0 1.7E-42 5.7E-47 340.3 0.0 324 96-422 32-386 (392)
67 4eu1_A Mitochondrial aspartate 100.0 1.4E-38 4.9E-43 314.0 27.5 316 94-422 40-407 (409)
68 7aat_A Aspartate aminotransfer 100.0 9.2E-39 3.2E-43 314.4 26.0 327 83-421 15-398 (401)
69 2q7w_A Aspartate aminotransfer 100.0 2.4E-38 8.4E-43 310.7 28.1 315 95-421 26-394 (396)
70 3ihj_A Alanine aminotransferas 100.0 1.1E-38 3.9E-43 322.2 25.6 297 124-422 123-486 (498)
71 2ay1_A Aroat, aromatic amino a 100.0 2.9E-38 1E-42 310.0 27.2 317 94-422 25-392 (394)
72 3meb_A Aspartate aminotransfer 100.0 4.6E-38 1.6E-42 314.1 28.7 330 80-421 33-439 (448)
73 1ajs_A Aspartate aminotransfer 100.0 8.3E-38 2.8E-42 308.7 30.2 317 93-421 28-406 (412)
74 1yaa_A Aspartate aminotransfer 100.0 1.2E-37 4.1E-42 307.6 29.0 318 93-422 27-407 (412)
75 4h51_A Aspartate aminotransfer 100.0 9.7E-38 3.3E-42 307.1 27.4 338 70-421 20-412 (420)
76 3tcm_A Alanine aminotransferas 100.0 6.2E-38 2.1E-42 317.2 26.6 296 124-421 128-486 (500)
77 2zy4_A L-aspartate beta-decarb 100.0 1E-38 3.4E-43 325.3 20.4 320 97-420 106-516 (546)
78 3g7q_A Valine-pyruvate aminotr 100.0 2.1E-38 7.1E-43 313.3 21.9 322 95-422 31-406 (417)
79 2hox_A ALLIIN lyase 1; cystein 100.0 2.3E-39 7.9E-44 321.3 14.4 308 94-422 55-418 (427)
80 3f6t_A Aspartate aminotransfer 100.0 1.6E-38 5.4E-43 323.7 20.0 322 96-422 104-518 (533)
81 3if2_A Aminotransferase; YP_26 100.0 1.2E-37 4.3E-42 310.5 22.5 324 95-422 31-433 (444)
82 3a2b_A Serine palmitoyltransfe 100.0 2.4E-36 8.3E-41 296.8 28.4 317 93-420 41-386 (398)
83 1bs0_A Protein (8-amino-7-oxon 100.0 2.7E-36 9.1E-41 295.0 25.0 318 93-422 37-383 (384)
84 1elu_A L-cysteine/L-cystine C- 100.0 1.7E-36 5.7E-41 296.6 22.4 317 96-422 16-388 (390)
85 1vjo_A Alanine--glyoxylate ami 100.0 1.1E-35 3.7E-40 291.5 28.0 311 104-421 40-390 (393)
86 2dr1_A PH1308 protein, 386AA l 100.0 3.2E-35 1.1E-39 287.1 30.9 316 98-421 21-374 (386)
87 1t3i_A Probable cysteine desul 100.0 2.5E-35 8.4E-40 291.2 27.3 319 95-422 27-409 (420)
88 1eg5_A Aminotransferase; PLP-d 100.0 3E-35 1E-39 286.9 26.2 314 98-421 3-371 (384)
89 2ch1_A 3-hydroxykynurenine tra 100.0 3.9E-35 1.3E-39 287.7 26.6 316 100-421 20-378 (396)
90 1kmj_A Selenocysteine lyase; p 100.0 8.8E-35 3E-39 285.8 28.6 319 95-422 22-401 (406)
91 1fc4_A 2-amino-3-ketobutyrate 100.0 4.2E-35 1.4E-39 288.2 23.5 317 93-421 43-392 (401)
92 1iug_A Putative aspartate amin 100.0 8.5E-35 2.9E-39 280.5 25.3 307 104-421 7-343 (352)
93 3tqx_A 2-amino-3-ketobutyrate 100.0 1.8E-35 6.1E-40 290.3 20.6 317 94-421 42-391 (399)
94 2z9v_A Aspartate aminotransfer 100.0 3E-34 1E-38 281.0 28.9 317 97-421 9-366 (392)
95 1m32_A 2-aminoethylphosphonate 100.0 3.2E-34 1.1E-38 277.7 28.4 315 97-421 5-360 (366)
96 3zrp_A Serine-pyruvate aminotr 100.0 4.7E-34 1.6E-38 278.5 29.6 310 103-421 7-358 (384)
97 3cai_A Possible aminotransfera 100.0 1.7E-34 5.9E-39 284.2 26.2 317 96-422 26-405 (406)
98 2e7j_A SEP-tRNA:Cys-tRNA synth 100.0 9.7E-36 3.3E-40 289.4 16.9 313 95-421 7-365 (371)
99 3nnk_A Ureidoglycine-glyoxylat 100.0 7.5E-34 2.6E-38 279.8 29.6 313 104-421 19-385 (411)
100 2yrr_A Aminotransferase, class 100.0 2.8E-34 9.4E-39 276.7 25.7 310 103-421 5-348 (353)
101 2huf_A Alanine glyoxylate amin 100.0 4.5E-34 1.5E-38 279.9 26.4 316 97-421 20-378 (393)
102 4hvk_A Probable cysteine desul 100.0 6.3E-34 2.1E-38 277.1 25.6 312 98-421 2-368 (382)
103 3lvm_A Cysteine desulfurase; s 100.0 1E-33 3.5E-38 280.1 26.9 318 93-421 19-394 (423)
104 3isl_A Purine catabolism prote 100.0 2.7E-33 9.2E-38 276.3 29.3 311 104-421 17-385 (416)
105 3kgw_A Alanine-glyoxylate amin 100.0 1E-33 3.5E-38 277.0 25.6 313 103-421 28-383 (393)
106 4eb5_A Probable cysteine desul 100.0 5.5E-34 1.9E-38 277.9 23.5 314 98-421 2-368 (382)
107 2bwn_A 5-aminolevulinate synth 100.0 3.5E-34 1.2E-38 281.7 21.4 318 94-422 45-396 (401)
108 2w8t_A SPT, serine palmitoyltr 100.0 1E-33 3.6E-38 280.9 24.4 318 93-421 62-410 (427)
109 2eh6_A Acoat, acetylornithine 100.0 8.2E-34 2.8E-38 276.4 22.5 308 93-421 26-373 (375)
110 1e5e_A MGL, methionine gamma-l 100.0 3.8E-33 1.3E-37 274.8 27.5 305 98-421 21-390 (404)
111 3f9t_A TDC, L-tyrosine decarbo 100.0 1.4E-32 4.8E-37 268.9 28.3 306 107-421 40-393 (397)
112 1jg8_A L-ALLO-threonine aldola 100.0 4E-33 1.4E-37 268.6 22.4 310 95-421 3-341 (347)
113 3f0h_A Aminotransferase; RER07 100.0 8.6E-33 2.9E-37 269.1 24.1 311 103-421 24-369 (376)
114 3kki_A CAI-1 autoinducer synth 100.0 1.4E-32 4.7E-37 271.2 25.0 318 92-421 56-399 (409)
115 3ruy_A Ornithine aminotransfer 100.0 1E-32 3.5E-37 270.5 22.6 311 92-421 33-389 (392)
116 1sff_A 4-aminobutyrate aminotr 100.0 4.6E-33 1.6E-37 275.8 18.0 322 92-420 38-418 (426)
117 2dkj_A Serine hydroxymethyltra 100.0 3.3E-32 1.1E-36 267.9 23.8 317 95-421 23-383 (407)
118 2eo5_A 419AA long hypothetical 100.0 1.8E-32 6.2E-37 271.3 22.0 313 92-420 39-412 (419)
119 1s0a_A Adenosylmethionine-8-am 100.0 5.7E-32 2E-36 268.4 25.5 320 92-421 40-419 (429)
120 3i4j_A Aminotransferase, class 100.0 9.2E-33 3.1E-37 274.3 19.5 325 92-420 26-422 (430)
121 1vef_A Acetylornithine/acetyl- 100.0 2.7E-32 9.3E-37 267.7 22.3 312 93-421 43-392 (395)
122 2bkw_A Alanine-glyoxylate amin 100.0 2.5E-31 8.7E-36 259.3 28.8 312 98-421 7-379 (385)
123 3vax_A Putative uncharacterize 100.0 2.7E-33 9.3E-38 275.0 14.7 316 94-421 18-395 (400)
124 3a9z_A Selenocysteine lyase; P 100.0 2.7E-32 9.1E-37 270.9 21.9 316 95-421 17-423 (432)
125 3ffr_A Phosphoserine aminotran 100.0 4.6E-32 1.6E-36 262.2 22.5 310 97-422 5-360 (362)
126 2ord_A Acoat, acetylornithine 100.0 3.1E-32 1.1E-36 267.5 20.1 311 93-421 38-392 (397)
127 1v72_A Aldolase; PLP-dependent 100.0 5.3E-31 1.8E-35 254.3 27.1 311 94-421 6-348 (356)
128 4adb_A Succinylornithine trans 100.0 2.2E-31 7.5E-36 262.0 24.4 311 92-420 36-394 (406)
129 3nx3_A Acoat, acetylornithine 100.0 3.7E-31 1.3E-35 259.7 24.2 316 92-421 33-390 (395)
130 1zod_A DGD, 2,2-dialkylglycine 100.0 2.1E-31 7E-36 264.7 22.1 324 92-420 40-426 (433)
131 1svv_A Threonine aldolase; str 100.0 1.7E-31 5.8E-36 257.9 20.1 313 96-421 14-353 (359)
132 1b9h_A AHBA synthase, protein 100.0 2.9E-30 9.8E-35 252.6 26.9 306 103-421 5-383 (388)
133 2oga_A Transaminase; PLP-depen 100.0 7.2E-31 2.5E-35 258.1 22.1 310 95-421 30-391 (399)
134 2c0r_A PSAT, phosphoserine ami 100.0 1.7E-31 5.8E-36 258.9 17.0 305 98-422 6-357 (362)
135 2pb2_A Acetylornithine/succiny 100.0 1.2E-30 4E-35 258.4 23.0 313 92-421 54-413 (420)
136 2po3_A 4-dehydrase; external a 100.0 1.3E-30 4.5E-35 258.3 23.3 280 99-392 20-328 (424)
137 3dxv_A Alpha-amino-epsilon-cap 100.0 7.3E-31 2.5E-35 261.2 20.1 321 92-420 40-419 (439)
138 1mdo_A ARNB aminotransferase; 100.0 1.3E-29 4.3E-34 248.3 27.7 308 96-422 9-382 (393)
139 1w23_A Phosphoserine aminotran 100.0 2.3E-31 8E-36 257.5 15.0 307 97-422 4-356 (360)
140 2fyf_A PSAT, phosphoserine ami 100.0 5E-30 1.7E-34 252.0 24.6 308 96-421 40-393 (398)
141 3pj0_A LMO0305 protein; struct 100.0 8.6E-31 2.9E-35 253.5 18.7 315 96-422 14-355 (359)
142 3gju_A Putative aminotransfera 100.0 2.9E-30 9.9E-35 258.5 22.6 322 92-420 48-450 (460)
143 3l44_A Glutamate-1-semialdehyd 100.0 1.5E-30 5E-35 258.7 20.0 316 91-421 51-425 (434)
144 1qz9_A Kynureninase; kynurenin 100.0 4.7E-30 1.6E-34 253.3 23.0 306 95-421 27-397 (416)
145 3n5m_A Adenosylmethionine-8-am 100.0 6.7E-30 2.3E-34 255.3 24.2 324 92-421 46-444 (452)
146 2rfv_A Methionine gamma-lyase; 100.0 1.5E-29 5.1E-34 248.6 26.1 308 99-422 24-396 (398)
147 1ibj_A CBL, cystathionine beta 100.0 2.9E-30 1E-34 257.8 21.0 310 96-421 90-457 (464)
148 1z7d_A Ornithine aminotransfer 100.0 9.4E-30 3.2E-34 252.8 24.3 314 91-420 61-423 (433)
149 4a6r_A Omega transaminase; tra 100.0 5.4E-30 1.8E-34 256.5 22.6 320 92-420 47-443 (459)
150 2ez2_A Beta-tyrosinase, tyrosi 100.0 5.4E-29 1.8E-33 248.9 29.1 314 95-420 42-425 (456)
151 1cs1_A CGS, protein (cystathio 100.0 8.4E-29 2.9E-33 242.3 29.5 281 124-422 47-383 (386)
152 3a8u_X Omega-amino acid--pyruv 100.0 8.1E-30 2.8E-34 254.5 22.6 319 92-420 47-441 (449)
153 2oat_A Ornithine aminotransfer 100.0 3.2E-29 1.1E-33 249.4 26.7 314 91-420 72-433 (439)
154 2aeu_A Hypothetical protein MJ 100.0 4E-30 1.4E-34 250.6 19.8 308 93-421 25-366 (374)
155 3k28_A Glutamate-1-semialdehyd 100.0 3.2E-30 1.1E-34 255.9 15.9 317 92-420 50-421 (429)
156 3ndn_A O-succinylhomoserine su 100.0 9E-29 3.1E-33 243.9 25.7 280 125-421 77-411 (414)
157 3tfu_A Adenosylmethionine-8-am 100.0 2.1E-29 7.2E-34 251.8 21.2 319 93-421 71-448 (457)
158 3n0l_A Serine hydroxymethyltra 100.0 1.7E-28 5.9E-33 242.0 26.9 316 96-421 26-384 (417)
159 3lws_A Aromatic amino acid bet 100.0 1.7E-29 5.6E-34 244.4 17.4 285 124-422 41-352 (357)
160 3dod_A Adenosylmethionine-8-am 100.0 3.8E-29 1.3E-33 249.6 20.5 320 92-421 41-435 (448)
161 2fnu_A Aminotransferase; prote 100.0 8.8E-29 3E-33 240.6 22.5 299 108-421 10-367 (375)
162 4ffc_A 4-aminobutyrate aminotr 100.0 5.1E-29 1.8E-33 248.9 20.8 325 91-422 60-442 (453)
163 1wyu_B Glycine dehydrogenase s 100.0 8.1E-28 2.8E-32 241.6 29.1 317 96-421 67-436 (474)
164 3e9k_A Kynureninase; kynurenin 100.0 1.1E-28 3.6E-33 247.5 21.9 281 131-421 113-456 (465)
165 3cog_A Cystathionine gamma-lya 100.0 2.4E-28 8.3E-33 240.3 23.1 279 124-421 62-397 (403)
166 3hmu_A Aminotransferase, class 100.0 1E-28 3.5E-33 247.7 20.6 322 91-421 51-447 (472)
167 1pff_A Methionine gamma-lyase; 100.0 2.1E-27 7.1E-32 227.3 28.6 270 133-421 2-329 (331)
168 2vi8_A Serine hydroxymethyltra 100.0 1.1E-28 3.8E-33 242.4 19.7 315 95-421 24-382 (405)
169 3mad_A Sphingosine-1-phosphate 100.0 5.7E-28 2E-32 245.2 25.3 282 133-421 143-464 (514)
170 3ecd_A Serine hydroxymethyltra 100.0 6.3E-28 2.2E-32 238.5 24.8 316 96-421 33-392 (425)
171 2e7u_A Glutamate-1-semialdehyd 100.0 1.6E-28 5.5E-33 243.3 20.4 312 92-420 49-421 (424)
172 3gbx_A Serine hydroxymethyltra 100.0 5E-28 1.7E-32 238.8 23.3 316 96-421 31-391 (420)
173 3fq8_A Glutamate-1-semialdehyd 100.0 3.3E-28 1.1E-32 241.2 22.0 318 91-421 48-422 (427)
174 3oks_A 4-aminobutyrate transam 100.0 9.9E-29 3.4E-33 246.7 18.0 326 91-422 57-444 (451)
175 3acz_A Methionine gamma-lyase; 100.0 7.5E-27 2.6E-31 228.7 31.0 276 125-420 55-383 (389)
176 2dgk_A GAD-beta, GADB, glutama 100.0 2.6E-27 9E-32 236.5 28.1 310 108-421 53-429 (452)
177 2epj_A Glutamate-1-semialdehyd 100.0 2.2E-28 7.5E-33 243.0 20.0 313 92-420 53-425 (434)
178 3qhx_A Cystathionine gamma-syn 100.0 2.9E-27 1E-31 231.8 27.6 278 125-419 62-387 (392)
179 1qgn_A Protein (cystathionine 100.0 5.2E-28 1.8E-32 239.9 22.2 279 126-421 111-440 (445)
180 2c81_A Glutamine-2-deoxy-scyll 100.0 8.9E-27 3E-31 230.3 30.9 304 104-422 8-410 (418)
181 3dr4_A Putative perosamine syn 100.0 5.8E-28 2E-32 236.6 21.5 310 95-422 22-389 (391)
182 1rv3_A Serine hydroxymethyltra 100.0 9.8E-28 3.4E-32 241.4 23.4 317 95-421 44-426 (483)
183 4e77_A Glutamate-1-semialdehyd 100.0 6.8E-28 2.3E-32 239.1 21.7 320 91-421 49-424 (429)
184 2cb1_A O-acetyl homoserine sul 100.0 3E-26 1E-30 226.1 33.2 295 105-420 30-410 (412)
185 3i5t_A Aminotransferase; pyrid 100.0 1.3E-27 4.5E-32 240.0 23.2 320 91-420 50-448 (476)
186 1gc0_A Methionine gamma-lyase; 100.0 8.3E-27 2.8E-31 229.1 27.9 280 125-422 61-397 (398)
187 1o69_A Aminotransferase; struc 100.0 4.8E-27 1.6E-31 230.4 24.3 298 111-422 12-383 (394)
188 3uwc_A Nucleotide-sugar aminot 100.0 2.4E-27 8.3E-32 230.5 21.8 306 96-421 7-366 (374)
189 3mc6_A Sphingosine-1-phosphate 100.0 3.7E-27 1.3E-31 238.3 23.2 282 133-421 111-432 (497)
190 1ax4_A Tryptophanase; tryptoph 100.0 6.8E-27 2.3E-31 234.3 24.9 314 95-421 43-436 (467)
191 2cy8_A D-phgat, D-phenylglycin 100.0 1.3E-27 4.4E-32 238.8 19.0 310 92-420 54-429 (453)
192 2cjg_A L-lysine-epsilon aminot 100.0 7.1E-28 2.4E-32 240.4 16.4 316 92-420 51-442 (449)
193 1n8p_A Cystathionine gamma-lya 100.0 4.4E-27 1.5E-31 230.6 21.6 280 125-422 51-391 (393)
194 3hbx_A GAD 1, glutamate decarb 100.0 1.3E-26 4.5E-31 234.2 25.7 312 107-421 66-439 (502)
195 3h7f_A Serine hydroxymethyltra 99.9 3.9E-26 1.3E-30 227.7 26.6 317 96-421 46-409 (447)
196 3ri6_A O-acetylhomoserine sulf 99.9 5.9E-26 2E-30 224.4 26.4 280 125-421 78-427 (430)
197 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.9 7.6E-26 2.6E-30 225.0 26.4 312 94-422 30-432 (437)
198 3nyt_A Aminotransferase WBPE; 99.9 3.8E-26 1.3E-30 221.8 23.4 296 110-422 15-360 (367)
199 3frk_A QDTB; aminotransferase, 99.9 2E-26 7E-31 224.1 20.4 295 110-422 16-364 (373)
200 3ju7_A Putative PLP-dependent 99.9 2.1E-25 7.3E-30 217.3 26.0 308 101-421 6-370 (377)
201 3i16_A Aluminum resistance pro 99.9 6.4E-26 2.2E-30 223.2 20.9 268 111-386 46-355 (427)
202 2fq6_A Cystathionine beta-lyas 99.9 1.5E-25 5.2E-30 220.7 23.2 281 125-421 78-413 (415)
203 3jzl_A Putative cystathionine 99.9 7.7E-26 2.6E-30 221.9 18.7 267 111-387 32-339 (409)
204 2z67_A O-phosphoseryl-tRNA(SEC 99.9 9.4E-25 3.2E-29 218.2 25.5 283 132-421 136-453 (456)
205 3nmy_A Xometc, cystathionine g 99.9 1.3E-24 4.3E-29 213.3 25.4 279 124-420 62-393 (400)
206 3hvy_A Cystathionine beta-lyas 99.9 3.3E-25 1.1E-29 218.2 20.9 265 111-386 47-355 (427)
207 2x3l_A ORN/Lys/Arg decarboxyla 99.9 1.3E-25 4.6E-30 223.5 17.2 277 126-422 54-349 (446)
208 1wyu_A Glycine dehydrogenase ( 99.9 5.3E-25 1.8E-29 218.9 21.1 309 98-422 67-436 (438)
209 2oqx_A Tryptophanase; lyase, p 99.9 8.7E-25 3E-29 219.0 21.5 313 96-422 42-435 (467)
210 3b8x_A WBDK, pyridoxamine 5-ph 99.9 5.2E-23 1.8E-27 201.3 32.5 299 109-422 13-389 (390)
211 2ctz_A O-acetyl-L-homoserine s 99.9 1.8E-24 6.2E-29 213.9 22.1 279 126-421 55-418 (421)
212 2okj_A Glutamate decarboxylase 99.9 4.9E-24 1.7E-28 215.7 25.0 287 133-421 136-497 (504)
213 3ke3_A Putative serine-pyruvat 99.9 1.3E-23 4.5E-28 204.9 23.0 281 131-421 37-371 (379)
214 2a7v_A Serine hydroxymethyltra 99.9 2.4E-23 8.3E-28 208.0 24.6 317 96-421 55-436 (490)
215 1ohv_A 4-aminobutyrate aminotr 99.9 1E-23 3.5E-28 211.5 17.0 320 91-422 59-464 (472)
216 2qma_A Diaminobutyrate-pyruvat 99.9 3.2E-23 1.1E-27 209.3 20.9 286 133-421 144-491 (497)
217 3vp6_A Glutamate decarboxylase 99.9 2.6E-22 8.8E-27 203.1 26.6 307 114-422 113-501 (511)
218 1js3_A DDC;, DOPA decarboxylas 99.9 5.6E-23 1.9E-27 207.0 21.6 305 112-421 89-469 (486)
219 1c4k_A Protein (ornithine deca 99.9 9.8E-23 3.4E-27 212.4 23.9 288 127-422 171-562 (730)
220 2yky_A Beta-transaminase; tran 99.8 6.8E-26 2.3E-30 225.3 0.0 293 91-394 96-433 (465)
221 2jis_A Cysteine sulfinic acid 99.9 1.1E-22 3.8E-27 206.3 23.4 288 132-421 151-510 (515)
222 3ht4_A Aluminum resistance pro 99.9 2.4E-23 8.3E-28 205.8 17.9 266 111-386 38-344 (431)
223 2vyc_A Biodegradative arginine 99.9 1.8E-21 6E-26 204.6 24.5 287 127-422 203-601 (755)
224 3e77_A Phosphoserine aminotran 99.9 8.8E-22 3E-26 190.3 18.0 302 104-422 19-371 (377)
225 4e1o_A HDC, histidine decarbox 99.9 4.6E-21 1.6E-25 192.7 21.2 295 124-421 108-473 (481)
226 3k40_A Aromatic-L-amino-acid d 99.9 1.1E-20 3.8E-25 189.4 20.4 294 124-421 103-466 (475)
227 3qm2_A Phosphoserine aminotran 99.9 3.1E-21 1.1E-25 187.5 14.8 300 106-422 35-381 (386)
228 3m5u_A Phosphoserine aminotran 99.9 1.7E-20 5.8E-25 180.6 19.4 304 96-422 5-356 (361)
229 3n75_A LDC, lysine decarboxyla 99.8 1.3E-18 4.6E-23 179.9 26.1 287 127-422 193-556 (715)
230 4ao9_A Beta-phenylalanine amin 99.7 2.9E-16 1E-20 155.0 20.0 315 91-421 83-441 (454)
231 4atq_A 4-aminobutyrate transam 99.7 7.7E-15 2.6E-19 145.3 24.2 325 91-421 60-447 (456)
232 3ou5_A Serine hydroxymethyltra 99.7 1.3E-14 4.4E-19 139.6 24.2 313 97-421 56-436 (490)
233 4e3q_A Pyruvate transaminase; 99.6 2.2E-13 7.6E-18 135.4 27.4 319 91-419 63-461 (473)
234 4a0g_A Adenosylmethionine-8-am 99.6 6.6E-16 2.3E-20 163.5 9.7 316 96-420 381-822 (831)
235 3bc8_A O-phosphoseryl-tRNA(SEC 99.5 3.4E-12 1.1E-16 124.9 26.1 289 133-422 102-439 (450)
236 3hl2_A O-phosphoseryl-tRNA(SEC 99.4 3.9E-12 1.3E-16 123.1 15.7 244 143-388 130-400 (501)
237 4dqx_A Probable oxidoreductase 62.2 38 0.0013 30.0 9.3 100 144-246 25-131 (277)
238 4fgs_A Probable dehydrogenase 61.7 24 0.00083 31.5 7.8 129 147-289 30-169 (273)
239 3rwb_A TPLDH, pyridoxal 4-dehy 61.7 35 0.0012 29.6 8.8 97 147-246 7-110 (247)
240 4g81_D Putative hexonate dehyd 60.4 42 0.0014 29.6 9.0 102 142-246 5-116 (255)
241 3n74_A 3-ketoacyl-(acyl-carrie 57.4 29 0.00099 30.2 7.6 98 146-246 9-114 (261)
242 3m1a_A Putative dehydrogenase; 56.0 54 0.0019 28.8 9.2 97 147-246 6-109 (281)
243 4e6p_A Probable sorbitol dehyd 55.1 55 0.0019 28.4 9.0 97 147-246 9-112 (259)
244 3ppi_A 3-hydroxyacyl-COA dehyd 53.1 62 0.0021 28.4 9.1 98 146-246 30-139 (281)
245 3rd5_A Mypaa.01249.C; ssgcid, 51.7 36 0.0012 30.3 7.3 79 144-225 14-93 (291)
246 4fn4_A Short chain dehydrogena 51.5 57 0.0019 28.7 8.3 96 147-246 8-115 (254)
247 3gem_A Short chain dehydrogena 49.8 81 0.0028 27.5 9.2 99 143-246 24-128 (260)
248 4eso_A Putative oxidoreductase 49.7 44 0.0015 29.1 7.4 98 146-246 8-112 (255)
249 2o23_A HADH2 protein; HSD17B10 49.2 1E+02 0.0034 26.5 9.8 100 144-246 10-122 (265)
250 3grp_A 3-oxoacyl-(acyl carrier 47.9 52 0.0018 28.9 7.6 101 143-246 24-131 (266)
251 3pxx_A Carveol dehydrogenase; 47.9 59 0.002 28.6 8.1 97 147-246 11-127 (287)
252 3guy_A Short-chain dehydrogena 47.7 38 0.0013 28.8 6.5 96 148-246 3-102 (230)
253 3tpc_A Short chain alcohol deh 47.7 47 0.0016 28.8 7.3 98 146-246 7-115 (257)
254 4h1h_A LMO1638 protein; MCCF-l 47.6 79 0.0027 28.9 9.0 80 167-246 9-106 (327)
255 3gvc_A Oxidoreductase, probabl 47.2 47 0.0016 29.4 7.3 97 147-246 30-133 (277)
256 3gaf_A 7-alpha-hydroxysteroid 46.4 68 0.0023 27.8 8.1 100 144-246 10-118 (256)
257 3l77_A Short-chain alcohol deh 46.3 1.1E+02 0.0039 25.7 9.5 96 148-246 4-110 (235)
258 3h7a_A Short chain dehydrogena 46.2 1.4E+02 0.0048 25.7 10.2 97 147-246 8-113 (252)
259 4egf_A L-xylulose reductase; s 45.8 1.3E+02 0.0044 26.1 9.9 105 142-246 16-128 (266)
260 4dyv_A Short-chain dehydrogena 45.0 80 0.0027 27.7 8.4 95 148-246 30-133 (272)
261 3op4_A 3-oxoacyl-[acyl-carrier 44.8 48 0.0016 28.7 6.8 100 144-246 7-113 (248)
262 3uf0_A Short-chain dehydrogena 44.6 1E+02 0.0035 27.0 9.1 102 142-246 27-136 (273)
263 3l6e_A Oxidoreductase, short-c 43.8 55 0.0019 28.0 7.0 96 148-246 5-107 (235)
264 3gi1_A LBP, laminin-binding pr 42.9 1.4E+02 0.0048 26.5 9.7 73 169-251 178-255 (286)
265 2ew8_A (S)-1-phenylethanol deh 42.9 1.3E+02 0.0044 25.7 9.4 97 147-246 8-112 (249)
266 3f9i_A 3-oxoacyl-[acyl-carrier 42.5 90 0.0031 26.7 8.3 77 146-225 14-91 (249)
267 3tha_A Tryptophan synthase alp 41.7 1.6E+02 0.0054 25.8 9.5 26 171-196 118-146 (252)
268 3tla_A MCCF; serine protease, 41.0 1.1E+02 0.0038 28.5 8.9 80 167-246 40-137 (371)
269 3rih_A Short chain dehydrogena 40.9 1.8E+02 0.0061 25.8 10.2 101 143-246 38-149 (293)
270 4e5s_A MCCFLIKE protein (BA_56 40.9 1.4E+02 0.0046 27.4 9.4 80 167-246 9-106 (331)
271 4gkb_A 3-oxoacyl-[acyl-carrier 40.8 1E+02 0.0035 27.0 8.3 142 144-297 5-156 (258)
272 3r1i_A Short-chain type dehydr 40.6 1.8E+02 0.0063 25.3 10.3 103 141-246 27-139 (276)
273 4imr_A 3-oxoacyl-(acyl-carrier 40.6 1.7E+02 0.0057 25.6 9.9 105 142-246 29-139 (275)
274 4fc7_A Peroxisomal 2,4-dienoyl 40.2 1E+02 0.0036 26.9 8.4 97 147-246 28-135 (277)
275 1vl8_A Gluconate 5-dehydrogena 40.2 1.6E+02 0.0056 25.5 9.7 100 144-246 19-129 (267)
276 3tfo_A Putative 3-oxoacyl-(acy 40.1 1.2E+02 0.0039 26.6 8.6 95 148-246 6-111 (264)
277 4ibo_A Gluconate dehydrogenase 40.0 1.3E+02 0.0046 26.1 9.1 102 142-246 22-133 (271)
278 3tzq_B Short-chain type dehydr 39.5 98 0.0034 27.0 8.1 97 147-246 12-117 (271)
279 1ywx_A 30S ribosomal protein S 38.4 31 0.0011 25.7 3.7 26 127-152 28-53 (102)
280 3tsc_A Putative oxidoreductase 38.3 1.6E+02 0.0053 25.7 9.3 97 147-246 12-131 (277)
281 1xn9_A 30S ribosomal protein S 38.0 32 0.0011 25.6 3.7 26 127-152 28-53 (101)
282 3sju_A Keto reductase; short-c 37.7 1.5E+02 0.0053 25.8 9.2 97 147-246 25-131 (279)
283 4hp8_A 2-deoxy-D-gluconate 3-d 37.4 1E+02 0.0035 26.9 7.6 137 142-289 5-148 (247)
284 4f6o_A Metacaspase-1; rossmann 37.3 38 0.0013 31.4 5.0 47 130-176 76-134 (350)
285 3ijr_A Oxidoreductase, short c 37.2 2.1E+02 0.0071 25.2 10.0 130 146-288 47-191 (291)
286 3n0v_A Formyltetrahydrofolate 37.1 1.3E+02 0.0045 26.9 8.5 90 149-243 94-187 (286)
287 3sc4_A Short chain dehydrogena 37.1 2.1E+02 0.0073 25.0 10.8 99 145-246 8-123 (285)
288 3lyl_A 3-oxoacyl-(acyl-carrier 37.1 1.3E+02 0.0044 25.6 8.4 97 147-246 6-112 (247)
289 3rkr_A Short chain oxidoreduct 36.7 1.5E+02 0.005 25.6 8.8 98 146-246 29-137 (262)
290 1hxh_A 3BETA/17BETA-hydroxyste 36.5 1.5E+02 0.0052 25.3 8.8 97 147-246 7-110 (253)
291 2wsb_A Galactitol dehydrogenas 36.0 2E+02 0.0068 24.3 9.5 98 146-246 11-115 (254)
292 1hdc_A 3-alpha, 20 beta-hydrox 36.0 1.7E+02 0.0057 25.1 9.0 97 147-246 6-109 (254)
293 3tjr_A Short chain dehydrogena 35.8 1.9E+02 0.0064 25.6 9.5 99 145-246 30-138 (301)
294 3lou_A Formyltetrahydrofolate 35.3 1.4E+02 0.0047 26.9 8.3 90 149-243 99-192 (292)
295 2jah_A Clavulanic acid dehydro 35.1 2.1E+02 0.0072 24.3 9.6 97 147-246 8-114 (247)
296 1fmc_A 7 alpha-hydroxysteroid 34.9 2.1E+02 0.0071 24.2 10.4 99 145-246 10-117 (255)
297 3e03_A Short chain dehydrogena 34.8 1.7E+02 0.0059 25.4 9.0 99 145-246 5-120 (274)
298 3ksu_A 3-oxoacyl-acyl carrier 34.1 1.7E+02 0.0057 25.3 8.7 101 143-246 8-121 (262)
299 2xhz_A KDSD, YRBH, arabinose 5 34.0 1.4E+02 0.0048 24.0 7.8 45 133-177 37-82 (183)
300 4dmm_A 3-oxoacyl-[acyl-carrier 33.9 1.5E+02 0.005 25.9 8.3 100 144-246 26-136 (269)
301 3ak4_A NADH-dependent quinucli 33.9 1.8E+02 0.0061 25.0 8.9 100 144-246 10-116 (263)
302 3ai3_A NADPH-sorbose reductase 33.7 2.3E+02 0.0077 24.3 9.7 97 147-246 8-115 (263)
303 3ged_A Short-chain dehydrogena 33.6 1.1E+02 0.0039 26.6 7.3 95 148-246 4-105 (247)
304 3sr3_A Microcin immunity prote 33.3 1.8E+02 0.006 26.7 8.9 80 167-246 10-107 (336)
305 3gdg_A Probable NADP-dependent 33.2 1.4E+02 0.0049 25.6 8.2 102 142-246 16-131 (267)
306 3nyw_A Putative oxidoreductase 33.2 95 0.0033 26.7 6.9 97 147-246 8-116 (250)
307 3sx2_A Putative 3-ketoacyl-(ac 33.1 1.4E+02 0.0047 26.0 8.0 95 147-246 14-128 (278)
308 1nff_A Putative oxidoreductase 33.0 2.2E+02 0.0076 24.4 9.3 97 147-246 8-111 (260)
309 1ae1_A Tropinone reductase-I; 32.9 2.4E+02 0.0082 24.4 10.3 99 145-246 20-129 (273)
310 3t7c_A Carveol dehydrogenase; 32.7 2.1E+02 0.0072 25.2 9.3 99 145-246 27-148 (299)
311 3uve_A Carveol dehydrogenase ( 32.6 1.1E+02 0.0039 26.8 7.4 98 146-246 11-135 (286)
312 3lf2_A Short chain oxidoreduct 32.4 2.2E+02 0.0074 24.6 9.2 99 145-246 7-117 (265)
313 2a4k_A 3-oxoacyl-[acyl carrier 32.4 1.9E+02 0.0064 25.0 8.7 97 147-246 7-110 (263)
314 3auf_A Glycinamide ribonucleot 32.3 2.4E+02 0.0082 24.2 9.7 88 149-242 26-121 (229)
315 3qiv_A Short-chain dehydrogena 32.3 2.3E+02 0.0079 24.0 9.5 98 146-246 9-119 (253)
316 3qlj_A Short chain dehydrogena 32.3 1.3E+02 0.0044 27.1 7.8 96 147-246 28-144 (322)
317 1jr2_A Uroporphyrinogen-III sy 32.2 46 0.0016 29.6 4.7 87 141-229 130-221 (286)
318 3nav_A Tryptophan synthase alp 32.1 2.7E+02 0.0091 24.6 10.0 18 211-228 143-160 (271)
319 3tox_A Short chain dehydrogena 31.9 2E+02 0.007 25.1 9.0 96 147-246 9-116 (280)
320 2ywr_A Phosphoribosylglycinami 31.9 2.2E+02 0.0074 24.1 8.7 86 149-240 5-98 (216)
321 2v94_A RPS24, 30S ribosomal pr 31.8 35 0.0012 25.6 3.1 26 127-152 37-62 (107)
322 3v8b_A Putative dehydrogenase, 31.4 2.6E+02 0.0088 24.4 9.6 100 144-246 26-136 (283)
323 3zv4_A CIS-2,3-dihydrobiphenyl 31.4 69 0.0024 28.2 5.7 76 147-225 6-86 (281)
324 3i1j_A Oxidoreductase, short c 31.3 1.8E+02 0.0061 24.6 8.4 99 147-246 15-125 (247)
325 3vc3_A Beta-cyanoalnine syntha 31.1 35 0.0012 31.6 3.7 83 148-231 89-172 (344)
326 3v2h_A D-beta-hydroxybutyrate 31.0 2E+02 0.0068 25.1 8.8 100 144-246 23-134 (281)
327 1geg_A Acetoin reductase; SDR 30.9 2.3E+02 0.0078 24.2 9.0 96 148-246 4-109 (256)
328 4iin_A 3-ketoacyl-acyl carrier 30.6 2.3E+02 0.0078 24.5 9.0 100 144-246 27-137 (271)
329 3av3_A Phosphoribosylglycinami 30.4 2.5E+02 0.0084 23.7 9.0 88 150-243 8-103 (212)
330 3imf_A Short chain dehydrogena 30.4 2.2E+02 0.0075 24.3 8.8 96 147-246 7-113 (257)
331 1w6u_A 2,4-dienoyl-COA reducta 30.2 2.5E+02 0.0085 24.5 9.4 97 147-246 27-134 (302)
332 1yb1_A 17-beta-hydroxysteroid 29.9 2.2E+02 0.0075 24.6 8.8 99 144-245 29-137 (272)
333 3is3_A 17BETA-hydroxysteroid d 29.9 2.7E+02 0.0092 24.0 9.9 96 147-246 19-126 (270)
334 3r3s_A Oxidoreductase; structu 29.6 2.5E+02 0.0085 24.7 9.2 98 146-246 49-159 (294)
335 1vhx_A Putative holliday junct 29.6 68 0.0023 25.6 4.7 55 203-257 40-101 (150)
336 2cfc_A 2-(R)-hydroxypropyl-COM 29.5 1.9E+02 0.0067 24.3 8.3 96 148-246 4-113 (250)
337 2ae2_A Protein (tropinone redu 29.3 2.7E+02 0.0091 23.8 10.6 98 146-246 9-117 (260)
338 1iy8_A Levodione reductase; ox 29.1 2.7E+02 0.0094 23.8 9.4 98 146-246 13-123 (267)
339 3oec_A Carveol dehydrogenase ( 29.0 1.9E+02 0.0066 25.8 8.4 98 146-246 46-165 (317)
340 3ucx_A Short chain dehydrogena 28.8 1.8E+02 0.0062 25.0 8.0 97 147-246 12-119 (264)
341 3oid_A Enoyl-[acyl-carrier-pro 28.8 2.8E+02 0.0094 23.8 9.7 96 148-246 6-112 (258)
342 3rku_A Oxidoreductase YMR226C; 28.6 2.2E+02 0.0076 25.0 8.6 99 147-246 34-146 (287)
343 2g1d_A 30S ribosomal protein S 28.5 32 0.0011 25.4 2.3 26 127-152 29-54 (98)
344 3cpr_A Dihydrodipicolinate syn 28.4 1E+02 0.0036 27.7 6.4 47 199-246 28-77 (304)
345 1xq1_A Putative tropinone redu 28.3 2.8E+02 0.0095 23.6 9.4 98 146-246 14-122 (266)
346 1x1t_A D(-)-3-hydroxybutyrate 28.3 2.8E+02 0.0095 23.7 10.7 96 148-246 6-113 (260)
347 3kvo_A Hydroxysteroid dehydrog 27.8 3.5E+02 0.012 24.6 11.3 97 147-246 46-159 (346)
348 1uls_A Putative 3-oxoacyl-acyl 27.8 2.8E+02 0.0095 23.5 10.2 95 147-246 6-107 (245)
349 3re1_A Uroporphyrinogen-III sy 27.7 38 0.0013 29.9 3.2 60 169-228 13-76 (269)
350 3a28_C L-2.3-butanediol dehydr 27.6 2.5E+02 0.0084 24.0 8.7 96 148-246 4-111 (258)
351 2c07_A 3-oxoacyl-(acyl-carrier 27.6 3E+02 0.01 23.8 11.1 97 147-246 45-151 (285)
352 4had_A Probable oxidoreductase 27.3 1.6E+02 0.0055 26.7 7.7 89 150-255 28-118 (350)
353 3edm_A Short chain dehydrogena 26.7 3E+02 0.01 23.5 9.1 98 146-246 8-117 (259)
354 2rhc_B Actinorhodin polyketide 26.4 2.4E+02 0.0082 24.5 8.4 98 146-246 22-129 (277)
355 3o38_A Short chain dehydrogena 26.4 1.8E+02 0.0063 24.9 7.6 99 145-246 21-131 (266)
356 3f1l_A Uncharacterized oxidore 26.3 3E+02 0.01 23.4 8.9 99 147-246 13-123 (252)
357 2wkj_A N-acetylneuraminate lya 26.2 1E+02 0.0036 27.7 5.9 47 199-246 23-72 (303)
358 3v2g_A 3-oxoacyl-[acyl-carrier 26.1 3.2E+02 0.011 23.6 10.2 101 143-246 28-139 (271)
359 4es6_A Uroporphyrinogen-III sy 25.8 36 0.0012 29.7 2.6 60 170-229 6-69 (254)
360 3s55_A Putative short-chain de 25.5 3.3E+02 0.011 23.5 10.2 98 146-246 10-129 (281)
361 3o1l_A Formyltetrahydrofolate 25.5 1.9E+02 0.0065 26.1 7.4 88 149-243 109-202 (302)
362 3ftp_A 3-oxoacyl-[acyl-carrier 25.5 2.9E+02 0.01 23.9 8.8 97 147-246 29-135 (270)
363 3ezl_A Acetoacetyl-COA reducta 25.4 2.3E+02 0.0079 24.0 8.0 96 147-246 14-121 (256)
364 3asu_A Short-chain dehydrogena 25.3 2.7E+02 0.0092 23.7 8.4 94 149-246 3-105 (248)
365 2uvd_A 3-oxoacyl-(acyl-carrier 25.2 3.1E+02 0.011 23.1 9.2 97 147-246 5-112 (246)
366 3kcq_A Phosphoribosylglycinami 25.2 3.1E+02 0.011 23.2 10.3 85 150-242 13-102 (215)
367 3pgx_A Carveol dehydrogenase; 25.1 1.9E+02 0.0065 25.1 7.5 98 146-246 15-135 (280)
368 3u9l_A 3-oxoacyl-[acyl-carrier 25.0 3E+02 0.01 24.7 8.9 96 148-246 7-117 (324)
369 3rjz_A N-type ATP pyrophosphat 24.9 2.9E+02 0.0099 23.8 8.2 96 148-251 7-120 (237)
370 2xzm_P RPS24E; ribosome, trans 24.7 52 0.0018 26.2 3.0 26 127-152 31-56 (149)
371 4b79_A PA4098, probable short- 24.2 2.7E+02 0.0092 24.0 8.0 126 147-289 12-143 (242)
372 1meo_A Phosophoribosylglycinam 24.0 3.2E+02 0.011 22.9 8.6 87 150-242 5-99 (209)
373 2pnf_A 3-oxoacyl-[acyl-carrier 23.8 3.2E+02 0.011 22.8 9.2 97 147-246 8-115 (248)
374 1spx_A Short-chain reductase f 23.4 2.3E+02 0.0079 24.4 7.7 74 148-225 8-93 (278)
375 1oaa_A Sepiapterin reductase; 23.3 3.4E+02 0.012 23.0 8.7 95 148-246 8-125 (259)
376 3u5c_Y RP50, 40S ribosomal pro 23.3 48 0.0016 26.0 2.5 26 127-152 33-58 (135)
377 4e3z_A Putative oxidoreductase 23.3 2.9E+02 0.0098 23.8 8.3 95 148-246 28-135 (272)
378 3pk0_A Short-chain dehydrogena 23.1 2.5E+02 0.0086 24.1 7.8 100 144-246 8-118 (262)
379 1iv0_A Hypothetical protein; r 23.0 1.2E+02 0.0041 22.2 4.7 55 203-257 36-96 (98)
380 3gnn_A Nicotinate-nucleotide p 22.8 2.2E+02 0.0076 25.6 7.2 90 145-248 186-275 (298)
381 1f6k_A N-acetylneuraminate lya 22.6 1.2E+02 0.004 27.2 5.5 54 198-252 14-78 (293)
382 3mw8_A Uroporphyrinogen-III sy 22.5 50 0.0017 28.4 2.9 57 170-228 1-60 (240)
383 3sho_A Transcriptional regulat 22.5 2.3E+02 0.0078 22.7 7.0 18 147-164 40-58 (187)
384 1zk4_A R-specific alcohol dehy 22.5 3.4E+02 0.012 22.7 9.9 97 147-246 7-112 (251)
385 3t4x_A Oxidoreductase, short c 22.4 3.7E+02 0.013 23.0 10.3 97 147-246 11-115 (267)
386 3osu_A 3-oxoacyl-[acyl-carrier 22.3 3.5E+02 0.012 22.8 10.2 96 148-246 6-112 (246)
387 3h5d_A DHDPS, dihydrodipicolin 22.1 3.2E+02 0.011 24.6 8.4 89 148-255 78-171 (311)
388 2qq5_A DHRS1, dehydrogenase/re 22.1 2.7E+02 0.0091 23.8 7.8 74 148-225 7-90 (260)
389 1jkx_A GART;, phosphoribosylgl 21.9 3.6E+02 0.012 22.7 9.8 87 150-242 5-99 (212)
390 3bk2_A RNAse J, metal dependen 21.9 1.4E+02 0.0048 29.6 6.4 80 148-227 308-406 (562)
391 1jr2_A Uroporphyrinogen-III sy 21.7 53 0.0018 29.2 3.0 60 170-229 21-87 (286)
392 3cxt_A Dehydrogenase with diff 21.6 4.1E+02 0.014 23.2 9.8 100 144-246 32-141 (291)
393 3fkr_A L-2-keto-3-deoxyarabona 21.3 91 0.0031 28.2 4.5 54 198-252 19-82 (309)
394 3tl3_A Short-chain type dehydr 21.2 1.3E+02 0.0044 25.9 5.4 94 147-246 10-113 (257)
395 3awd_A GOX2181, putative polyo 21.2 3.7E+02 0.013 22.6 10.7 100 144-246 11-121 (260)
396 2o1e_A YCDH; alpha-beta protei 21.1 2.3E+02 0.0077 25.5 7.2 73 169-251 189-266 (312)
397 1xkq_A Short-chain reductase f 21.1 4E+02 0.014 22.9 9.0 97 147-246 7-120 (280)
398 2x9g_A PTR1, pteridine reducta 21.1 2.8E+02 0.0095 24.2 7.8 79 147-225 24-113 (288)
399 1xhl_A Short-chain dehydrogena 21.0 4.2E+02 0.014 23.2 9.0 100 144-246 24-138 (297)
400 4dpp_A DHDPS 2, dihydrodipicol 21.0 1.5E+02 0.0052 27.4 6.0 47 199-246 71-120 (360)
401 3ujp_A Mn transporter subunit; 21.0 2.6E+02 0.009 25.1 7.5 71 170-250 190-265 (307)
402 3gk3_A Acetoacetyl-COA reducta 20.9 3.5E+02 0.012 23.1 8.4 95 148-246 27-133 (269)
403 3b4u_A Dihydrodipicolinate syn 20.8 1.1E+02 0.0037 27.4 4.9 54 198-252 14-77 (294)
404 3r44_A Fatty acyl COA syntheta 20.6 3.3E+02 0.011 26.1 8.8 71 148-223 174-263 (517)
405 2ojp_A DHDPS, dihydrodipicolin 20.5 1.1E+02 0.0039 27.3 4.9 54 198-252 12-75 (292)
406 1zem_A Xylitol dehydrogenase; 20.4 4E+02 0.014 22.7 9.4 97 147-246 8-115 (262)
407 1wcw_A Uroporphyrinogen III sy 20.4 53 0.0018 28.6 2.7 60 169-229 7-70 (261)
408 3tqv_A Nicotinate-nucleotide p 20.4 2.6E+02 0.0089 24.9 7.1 88 145-248 175-264 (287)
409 1zl0_A Hypothetical protein PA 20.3 4.2E+02 0.014 23.8 8.7 79 167-245 14-107 (311)
No 1
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=100.00 E-value=2.2e-49 Score=384.98 Aligned_cols=350 Identities=31% Similarity=0.469 Sum_probs=306.5
Q ss_pred HHHhcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHhCCCC
Q 014492 68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLES 146 (423)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~g~~~lr~~ia~~~g~~~ 146 (423)
++.++.+.+|.+......+.+++|. .++|+|+.|+++++++|++.+++.+. ....+||+.+..++|+++++++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~lr~~la~~~~~~~ 84 (363)
T 3ffh_A 7 KKSLAGLSSYKPGKREEEVMAELGL--TKITKLSSNENPLGTSKKVAAIQANSSVETEIYPDGWASSLRKEVADFYQLEE 84 (363)
T ss_dssp CGGGTTCCC----CHHHHHHHTTTC--SCCEECSSCSCTTCCCHHHHHHHHTCBSCCCBC----CHHHHHHHHHHHTCCG
T ss_pred hHHHHhCCCCCCCCCHHHHHHhcCC--CceEEccCCCCCCCCCHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHhCCCh
Confidence 5567778888777777777776765 57899999999999999999999874 44467888888999999999999999
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcC
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTS 226 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~ 226 (423)
++|++|+|+++++..++++++++||+|+++.|+|..+...++..|++++.+|.++++.+|++++++.++ .++++|++++
T Consensus 85 ~~v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~v~~~~ 163 (363)
T 3ffh_A 85 EELIFTAGVDELIELLTRVLLDTTTNTVMATPTFVQYRQNALIEGAEVREIPLLQDGEHDLEGMLNAID-EKTTIVWICN 163 (363)
T ss_dssp GGEEEESSHHHHHHHHHHHHCSTTCEEEEEESSCHHHHHHHHHHTCEEEEEECCTTSCCCHHHHHHHCC-TTEEEEEEES
T ss_pred hhEEEeCCHHHHHHHHHHHHccCCCEEEEcCCChHHHHHHHHHcCCEEEEecCCCCCCcCHHHHHHhcc-cCCCEEEEeC
Confidence 999999999999999999999999999999999999999999999999999987788999999999997 6899999999
Q ss_pred CCCCcCcCCCHHHHHHHHcC---CCEEEEccCCccccCCC--chhhhhccCCcEEEEccChhhhcccCccccccccCHHH
Q 014492 227 PNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLE--SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI 301 (423)
Q Consensus 227 p~NPtG~~~~~~~l~~i~~~---~~~li~Deay~~~~~~~--~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~ 301 (423)
|+||||.+++.+++.+|++. |+++|+||+|.+|.++. .........+++++++|+||.+|++|+|+||+++++++
T Consensus 164 p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~ 243 (363)
T 3ffh_A 164 PNNPTGNYIELADIQAFLDRVPSDVLVVLDEAYIEYVTPQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADKEI 243 (363)
T ss_dssp SCTTTCCCCCHHHHHHHHTTSCTTSEEEEECTTGGGCSSCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEECHHH
T ss_pred CCCCcCCCcCHHHHHHHHHhCCCCcEEEEeCchHhhcCccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecCHHH
Confidence 99999999999999999986 89999999999887521 23344456789999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHH
Q 014492 302 IEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKD 381 (423)
Q Consensus 302 ~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~ 381 (423)
++.+.....+++.+.+++.++..+|++.+++++.+++++++++++.+.|+++.++.+.++.++|+|++++. +..++.+
T Consensus 244 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~ 321 (363)
T 3ffh_A 244 IRQLNIVRPPFNTTSIGQKLAIEAIKDQAFIGECRTSNANGIKQYEAFAKRFEKVKLYPANGNFVLIDLGI--EAGTIFS 321 (363)
T ss_dssp HHHHHHTCCSCCCBHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCTTCEECCCCSSEEEEECSS--CHHHHHH
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhhCCCceECCCCCeEEEEECCC--CHHHHHH
Confidence 99999988899999999999999999888999999999999999999999955577778889999999974 7899999
Q ss_pred HHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 382 DLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 382 ~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.|.++||.++++..++.++++||++++.++++++.++|+++
T Consensus 322 ~l~~~gi~v~~g~~~~~~~~iRis~~~~~~i~~~~~~l~~~ 362 (363)
T 3ffh_A 322 YLEKNGYITRSGAALGFPTAVRITIGKEEDNSAVIALLEKL 362 (363)
T ss_dssp HHHHTTEECEETTTTTCTTEEEEECCCHHHHHHHHHHHHHH
T ss_pred HHHHCCeEEEeCccCCCCCeEEEECCCHHHHHHHHHHHHHh
Confidence 99999999999887766899999999988889999988764
No 2
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=100.00 E-value=1e-49 Score=386.75 Aligned_cols=339 Identities=31% Similarity=0.535 Sum_probs=293.2
Q ss_pred hHHHHhcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHhCCC
Q 014492 66 FIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLE 145 (423)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y~~~g~~~lr~~ia~~~g~~ 145 (423)
++++.+..+.+|.+.... ...++|+|+.|+|+++++|.+ + +....+||+++..++|+++++++|++
T Consensus 9 ~~~~~~~~~~~~~~~~~~---------~~~~~i~l~~~~~~~~~~~~v--a---~~~~~~Y~~~~~~~lr~~la~~~~~~ 74 (356)
T 1fg7_A 9 LARENVRNLTPYQSARRL---------GGNGDVWLNANEYPTAVEFQL--T---QQTLNRYPECQPKAVIENYAQYAGVK 74 (356)
T ss_dssp HSCHHHHHCCCCCCCCCC---------TTTCSEECSSCCCSSCCCCCC--C---CCCTTSCCCSSCHHHHHHHHHHHTSC
T ss_pred HhhHHHHhcCCCCCCccc---------CCCceEEeeCCCCCCCCCHhH--h---hhhhccCCCccHHHHHHHHHHHhCCC
Confidence 456777788887654321 124679999999999988876 2 23346798888899999999999999
Q ss_pred CCcEEEeCCHHHHHHHHHHHhcCCC-CeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEE
Q 014492 146 SDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFL 224 (423)
Q Consensus 146 ~~~i~~t~G~~~al~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l 224 (423)
+++|++|+|+++++..++++++++| |+|+++.|+|..|...++..|++++.+|.++++.+|++++++.++ ++++|++
T Consensus 75 ~~~v~~~~G~~~ai~~~~~~~~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~--~~~~v~l 152 (356)
T 1fg7_A 75 PEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTLDNWQLDLQGISDKLD--GVKVVYV 152 (356)
T ss_dssp GGGEEEESHHHHHHHHHHHHHCCTTTCEEEECSSSCTHHHHHHHHHTCEEEECCCCTTSCCCHHHHHTSCT--TEEEEEE
T ss_pred hHHEEEcCCHHHHHHHHHHHHhCCCCCEEEEeCCChHHHHHHHHHcCCEEEEeeCCCCCCCCHHHHHHHhc--CCCEEEE
Confidence 9999999999999999999999999 999999999999999999999999999987778899999999886 7899999
Q ss_pred cCCCCCcCcCCCHHHHHHHHcC---CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHH
Q 014492 225 TSPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI 301 (423)
Q Consensus 225 ~~p~NPtG~~~~~~~l~~i~~~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~ 301 (423)
++||||||.+++.+++++|++. |+++|+||+|.+|....+.....+..+++++++|+||.||++|+|+||+++++++
T Consensus 153 ~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~ 232 (356)
T 1fg7_A 153 CSPNNPTGQLINPQDFRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANEEV 232 (356)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHHTTTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEECHHH
T ss_pred eCCCCCCCCCCCHHHHHHHHHhCCCCCEEEEEccchhhcCCCcHHHHHhhCCCEEEEecchHhhcCchhhhEEEEeCHHH
Confidence 9999999999999999998875 8999999999988732222333345688999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCcHHHHHHHHHHhCChHH--HHHHHHHHHHHHHHHHHHHccCCCC-eecCCCceEEEEEeCCCCCHHH
Q 014492 302 IEYLWRAKQPYNVSVAAEVAACAALQNPIY--LEKVKEALIKERERLFKLLKDVPFL-NPYPSYSNFILCEVTSGMDAKK 378 (423)
Q Consensus 302 ~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~-~~~p~~~~~~~~~~~~~~~~~~ 378 (423)
++.+.....+|+.|.++|.++.++|++.++ +++.+++++++++++.+.|++++.+ .+.|+.++|+|++++ +..+
T Consensus 233 ~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~---~~~~ 309 (356)
T 1fg7_A 233 INLLMKVIAPYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYILARFK---ASSA 309 (356)
T ss_dssp HHHHHHHSCSSCSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCCSSSEEEEEET---THHH
T ss_pred HHHHHHhcCCCCCCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEECCCCCeEEEEECC---CHHH
Confidence 999999888899999999999999987655 8899999999999999999988743 456888999999996 6788
Q ss_pred HHHHHHhCCcEEEe-CCCCCCCCeEEEEecChhhHHHHHHHHhhhC
Q 014492 379 LKDDLAKMGVMIRH-YNNKELKGYVRVSVGKPEHTDALMECLMHLY 423 (423)
Q Consensus 379 l~~~L~~~gI~v~~-~~~~~~~~~iRis~~~~~~~~~l~~al~~l~ 423 (423)
+.+.|.++||.+++ +..++.++++||++++.++++++.++|++++
T Consensus 310 l~~~L~~~gI~v~~~g~~~~~~~~iRis~~~~~e~~~~~~~l~~~~ 355 (356)
T 1fg7_A 310 VFKSLWDQGIILRDQNKQPSLSGCLRITVGTREESQRVIDALRAEQ 355 (356)
T ss_dssp HHHHHHHTTEECEECTTSTTCTTEEEEECCCHHHHHHHHHHHHTCC
T ss_pred HHHHHHHCCEEEEECCCCCCCCCeEEEEeCCHHHHHHHHHHHHhhc
Confidence 99999999999999 6656567899999999888999999988753
No 3
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=100.00 E-value=2.5e-49 Score=384.96 Aligned_cols=348 Identities=29% Similarity=0.505 Sum_probs=311.0
Q ss_pred HHHhcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHhCCCC
Q 014492 68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLES 146 (423)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Y~~~g~~~lr~~ia~~~g~~~ 146 (423)
++.++.+.+|.+......++++++. +++|+|+.|+++++++|.+.+++.+ +....+|+++...++|+++++++|+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~lr~~la~~~~~~~ 82 (365)
T 3get_A 5 NEFLNNLSNYEPGKDIEVIAKEYGV--KEVIKLASNENPFGTPPKAIECLRQNANKAHLYPDDSMIELKSTLAQKYKVQN 82 (365)
T ss_dssp CGGGGGSCCCCCCCCHHHHHHHTTC--SCCEECSSCCCTTCSCHHHHHHHHHHGGGTTSCCCTTCHHHHHHHHHHHTCCG
T ss_pred chhHhhcCCCCCCCCHHHHHHhcCC--CceEEecCCCCCCCCCHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHhCCCc
Confidence 4667788899888888888888776 6789999999999999999999987 344467877655899999999999999
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC-CCCCCCCHHHHHHHhhcCCceEEEEc
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR-KSDFSLNVELIADAVEREKPKCIFLT 225 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~d~~~l~~~i~~~~~~~i~l~ 225 (423)
++|++|+|+++++..++..++++||+|+++.|+|..+...++..|++++.+|. ++++ +|++++++.++ +++++|+++
T Consensus 83 ~~v~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~d~~~l~~~l~-~~~~~v~~~ 160 (365)
T 3get_A 83 ENIIIGAGSDQVIEFAIHSKLNSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQSITHNL-DEFKKLYETHK-DEIKLIFLC 160 (365)
T ss_dssp GGEEEESSHHHHHHHHHHHHCCTTCEEEECSSCCTHHHHHHHHHTCEEEECSSSSCCH-HHHHHHHHHTT-TTEEEEEEE
T ss_pred ceEEECCCHHHHHHHHHHHHhCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecCCCCC-CCHHHHHHHhC-CCCCEEEEc
Confidence 99999999999999999999999999999999999999999999999999997 6677 99999999997 789999999
Q ss_pred CCCCCcCcCCCHHHHHHHHcC---CCEEEEccCCcccc---CCC---chhhhhccCCcEEEEccChhhhcccCccccccc
Q 014492 226 SPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFS---GLE---SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA 296 (423)
Q Consensus 226 ~p~NPtG~~~~~~~l~~i~~~---~~~li~Deay~~~~---~~~---~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~ 296 (423)
+|+||||.+++.+++.+|++. |+++|+||+|.++. .+. .........+++++++|+||.+|++|+|+||++
T Consensus 161 ~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 240 (365)
T 3get_A 161 LPNNPLGECLDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGI 240 (365)
T ss_dssp SSCTTTCCCCCHHHHHHHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEE
T ss_pred CCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEE
Confidence 999999999999999999984 99999999999877 321 233344557899999999999999999999999
Q ss_pred cCHHHHHHHHHhcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCH
Q 014492 297 FPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDA 376 (423)
Q Consensus 297 ~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~ 376 (423)
+++++++.+......++.+.+++.++..+|++.+++++.+++++++++++.+.|+++ ++.+.++.++|+|+++++. +.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~~~~~~~~~-~~ 318 (365)
T 3get_A 241 ANANIISAFYKLRAPFNVSNLALKAAVAAMDDDEFTEKTLENNFSQMELYKEFAKKH-NIKIIDSYTNFITYFFDEK-NS 318 (365)
T ss_dssp ECHHHHHHHHHHSCTTCSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT-TCEECCCSSSEEEEECSSS-CH
T ss_pred cCHHHHHHHHHhcCCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEECCCCCeEEEEECCCC-CH
Confidence 999999999999888999999999999999998899999999999999999999988 4667788899999999855 88
Q ss_pred HHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 377 KKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 377 ~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.++.+.|.++||.++++..++ ++++||++++.++++++.++|+++
T Consensus 319 ~~~~~~l~~~gi~v~~g~~~~-~~~iRis~~~~~~i~~l~~~l~~~ 363 (365)
T 3get_A 319 TDLSEKLLKKGIIIRNLKSYG-LNAIRITIGTSYENEKFFTEFDKI 363 (365)
T ss_dssp HHHHHHHHTTTEECEECGGGT-CSEEEEECCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCEEEEECccCC-CCEEEEEcCCHHHHHHHHHHHHHH
Confidence 999999999999999987655 799999999988899999988764
No 4
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=100.00 E-value=1.2e-47 Score=371.33 Aligned_cols=326 Identities=25% Similarity=0.388 Sum_probs=292.8
Q ss_pred CCCCeeEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCC
Q 014492 93 KPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD 171 (423)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd 171 (423)
.++++|+|+.|++++++++++.+++.+ +....+||+++..++|+++++++|+++++|++|+|+++++..+++.++++||
T Consensus 14 ~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~l~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd 93 (354)
T 3ly1_A 14 STDNPIRINFNENPLGMSPKAQAAARDAVVKANRYAKNEILMLGNKLAAHHQVEAPSILLTAGSSEGIRAAIEAYASLEA 93 (354)
T ss_dssp CSSSCEECSSCCCSSCCCHHHHHHHHHTGGGTTSCCHHHHHHHHHHHHHHTTSCGGGEEEESHHHHHHHHHHHHHCCTTC
T ss_pred CCCceEEccCCCCCCCCCHHHHHHHHHHHhhCcCCCCCchHHHHHHHHHHhCCChHHEEEeCChHHHHHHHHHHHhCCCC
Confidence 456789999999999999999999987 3444778888889999999999999999999999999999999999999999
Q ss_pred eEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-CCceEEEEcCCCCCcCcCCCHHHHHHHHcC---C
Q 014492 172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTSPNNPDGSIINDEDLLKILEM---P 247 (423)
Q Consensus 172 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~---~ 247 (423)
+|+++.|+|..+...++..|++++.+|.+.++.+|++++++.+++ +++++|++++|+||||.+++.+++.+|++. |
T Consensus 94 ~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~ 173 (354)
T 3ly1_A 94 QLVIPELTYGDGEHFAKIAGMKVTKVKMLDNWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADVIEPWIASKPAN 173 (354)
T ss_dssp EEEEESSSCTHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHHHTCSSCEEEEEESSCTTTCCCCCHHHHHHHHHTCCTT
T ss_pred eEEECCCCchHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhccCCCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCC
Confidence 999999999999999999999999999887889999999999975 589999999999999999999999999986 8
Q ss_pred CEEEEccCCccccCCC---chhhhhccC-CcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCcHHHHHHHH
Q 014492 248 ILVVLDEAYTEFSGLE---SRMEWVKKH-DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAAC 323 (423)
Q Consensus 248 ~~li~Deay~~~~~~~---~~~~~~~~~-~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~~~~~a~~ 323 (423)
+++|+||+|.++.+.+ ......+.. +++++++|+||.+|++|+|+||+++++++++.+......++.+.+++.++.
T Consensus 174 ~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 253 (354)
T 3ly1_A 174 TMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAHPTVIALMGRYVAGEKINFSGVDAAL 253 (354)
T ss_dssp EEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECCHHHHHHHGGGTTCSCCCHHHHHHHH
T ss_pred eEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecCHHHHHHHHHhcCCCCCCHHHHHHHH
Confidence 9999999999887654 333444455 889999999999999999999999999999999988888999999999999
Q ss_pred HHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEE
Q 014492 324 AALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVR 403 (423)
Q Consensus 324 ~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iR 403 (423)
++|++.+++++.+++++++++++.+.|++++ +.+.++.++|+|+++++ +..++.+.|.++||.++ +..+..++++|
T Consensus 254 ~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~gi~v~-g~~~~~~~~iR 329 (354)
T 3ly1_A 254 ASMNDSAFITYSKKSNDVSRQILLKALEDLK-LPYLPSEGNFVFHQLVV--PLKDYQTHMADAGVLIG-RAFPPADNWCR 329 (354)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHT-CCBCCCCSSEEEEECSS--CHHHHHHHHHHTTEECC-CCCTTCTTEEE
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHHHHHCC-CeECCCCceEEEEECCC--CHHHHHHHHHHCCEEEe-ecCCCCCCEEE
Confidence 9999988999999999999999999998874 55567889999999974 78899999999999998 65555788999
Q ss_pred EEecChhhHHHHHHHHhhh
Q 014492 404 VSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 404 is~~~~~~~~~l~~al~~l 422 (423)
|++++.++++++.++|+++
T Consensus 330 is~~~~~~i~~~~~~l~~~ 348 (354)
T 3ly1_A 330 ISLGTPQEMQWVADTMREF 348 (354)
T ss_dssp EECCCHHHHHHHHHHHHHH
T ss_pred EEcCCHHHHHHHHHHHHHH
Confidence 9999988888888888764
No 5
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=100.00 E-value=2.3e-47 Score=370.61 Aligned_cols=341 Identities=29% Similarity=0.468 Sum_probs=297.6
Q ss_pred hHHHHhcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcC-CC----CCCCCCcchHHHHHHHHH
Q 014492 66 FIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-KF----PYIYPDPESRRLRAALAK 140 (423)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~----~~~Y~~~g~~~lr~~ia~ 140 (423)
++++.++.+.+|.+... ...+.++|+|+.|+++++++|++.+++.+. .. ..+|++++..++|+++++
T Consensus 5 ~~~~~~~~~~~~~~~~~--------~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~lr~~la~ 76 (360)
T 3hdo_A 5 PLRQNIASMKGYIPGYQ--------PPDIASWIKLNTNENPYPPSPEVVKAILEELGPDGAALRIYPSASSQKLREVAGE 76 (360)
T ss_dssp CCCHHHHHCCCCCCCCC--------CSCCTTSEECSSCCCSSCCCHHHHHHHHHHHTTTCGGGGSCCCSSCHHHHHHHHH
T ss_pred hhHHHHHhcCCcCCCCC--------CccccceeeccCCCCCCCCCHHHHHHHHHHHhcccchhhcCCCCchHHHHHHHHH
Confidence 35677888888865432 123467899999999999999999999873 32 357888778999999999
Q ss_pred HhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCce
Q 014492 141 DSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPK 220 (423)
Q Consensus 141 ~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~ 220 (423)
++|+++++|++|+|+++++..++++++++||+|+++.|+|..+...++..|++++.+|.++++.+ +++++. .+++
T Consensus 77 ~~g~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~--~~l~~~---~~~~ 151 (360)
T 3hdo_A 77 LYGFDPSWIIMANGSDEVLNNLIRAFAAEGEEIGYVHPSYSYYGTLAEVQGARVRTFGLTGDFRI--AGFPER---YEGK 151 (360)
T ss_dssp HHTCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEESSSCTHHHHHHHHHTCEEEEECBCTTSSB--TTCCSS---BCSS
T ss_pred HhCcCcceEEEcCCHHHHHHHHHHHHhCCCCEEEEcCCChHHHHHHHHHCCCEEEEeeCCCCCCH--HHHHhh---cCCC
Confidence 99999999999999999999999999999999999999999999999999999999998766555 444332 3577
Q ss_pred EEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCH
Q 014492 221 CIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299 (423)
Q Consensus 221 ~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~ 299 (423)
++++++|+||||.+++.+++.+|++. |+++|+||+|.+|... .........+++++++|+||.+|++|+|+||+++++
T Consensus 152 ~v~i~~p~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~ 230 (360)
T 3hdo_A 152 VFFLTTPNAPLGPSFPLEYIDELARRCAGMLVLDETYAEFAES-NALELVRRHENVVVTRTLSKSYSLAGMRIGLAIARP 230 (360)
T ss_dssp EEEEESSCTTTCCCCCHHHHHHHHHHBSSEEEEECTTGGGSSC-CCTHHHHHCSSEEEEEESTTTTSCTTSCCEEEECCH
T ss_pred EEEEeCCCCCCCCCcCHHHHHHHHHHCCCEEEEECChHhhCCc-chhHHhccCCCEEEEecchHhhcCCccceeeEeeCH
Confidence 99999999999999999999999987 9999999999988543 344444567899999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHH
Q 014492 300 SIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKL 379 (423)
Q Consensus 300 ~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l 379 (423)
++++.+......++.+++++.++.++|++.+++++.+++++++++++.+.|+++ ++.+.++.++|+|++++ +.+..++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~-~~~~~~l 308 (360)
T 3hdo_A 231 EVIAALDKIRDHYNLDRLAQAACVAALRDQAYLSECCRRIRETREWFTTELRSI-GYDVIPSQGNYLFATPP-DRDGKRV 308 (360)
T ss_dssp HHHHHHHHHSCSCCSCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHT-TCEECCCSSSEEEEECT-TCCHHHH
T ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEcCCCccEEEEECC-CCCHHHH
Confidence 999999998888999999999999999998889999999999999999999988 46677888999999987 5688999
Q ss_pred HHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 380 KDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 380 ~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.+.|.++||.+++++.+..++++||++++.+++++|.++|+.+
T Consensus 309 ~~~l~~~gi~v~~~~~~~~~~~iRis~~~~~e~~~l~~al~~~ 351 (360)
T 3hdo_A 309 YDGLYARKVLVRHFSDPLLAHGMRISIGTREEMEQTLAALKEI 351 (360)
T ss_dssp HHHHHHTTEECBCCCSTTTTTSEEEECCCHHHHHHHHHHHHHH
T ss_pred HHHHHHCCEEEEECCCCCCCCEEEEEcCCHHHHHHHHHHHHHH
Confidence 9999999999999876566789999999999999999999875
No 6
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=100.00 E-value=1.1e-46 Score=366.45 Aligned_cols=341 Identities=34% Similarity=0.532 Sum_probs=300.3
Q ss_pred hhHHHHhcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCCcchHHHHHHHHHH
Q 014492 65 SFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-K--FPYIYPDPESRRLRAALAKD 141 (423)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~Y~~~g~~~lr~~ia~~ 141 (423)
.++++.+..+.+|.+. .++++|+|+.|++++++++++.+++.+. . ...+|++++..++|++++++
T Consensus 12 ~~~~~~~~~~~~~~~~------------~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~l~~~la~~ 79 (367)
T 3euc_A 12 RIIRDDVRAMGAYHVP------------DSHGLVKLDAMENPYRLPPALRSELAARLGEVALNRYPVPSSEALRAKLKEV 79 (367)
T ss_dssp HHSCHHHHHSCCSSCC------------CCTTCEECCSSCCCCCCCHHHHHHHHHHHHHHHTTCSCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCC------------CCCCeeEccCCCCCCCCCHHHHHHHHHHhhhhhhhcCCCCcHHHHHHHHHHH
Confidence 4556777777777542 2357899999999999999999998762 2 23678888889999999999
Q ss_pred hCC-CCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCce
Q 014492 142 SGL-ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPK 220 (423)
Q Consensus 142 ~g~-~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~ 220 (423)
+|+ ++++|++|+|+++++..+++.++++||+|+++.|+|..+...++..|++++.+|.+.++.+|++++++.+.+.+++
T Consensus 80 ~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~ 159 (367)
T 3euc_A 80 MQVPAGMEVLLGNGSDEIISMLALAAARPGAKVMAPVPGFVMYAMSAQFAGLEFVGVPLRADFTLDRGAMLAAMAEHQPA 159 (367)
T ss_dssp HTCCTTCEEEEEEHHHHHHHHHHHHTCCTTCEEEEEESCSCCSCHHHHTTTCEEEEEECCTTSCCCHHHHHHHHHHHCCS
T ss_pred hCCCCcceEEEcCCHHHHHHHHHHHHcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEecCCCCCCCCHHHHHHHhhccCCC
Confidence 998 7889999999999999999999999999999999999999999999999999998888899999999999744899
Q ss_pred EEEEcCCCCCcCcCCCHHHHHHHHcC------CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccc
Q 014492 221 CIFLTSPNNPDGSIINDEDLLKILEM------PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGY 294 (423)
Q Consensus 221 ~i~l~~p~NPtG~~~~~~~l~~i~~~------~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~ 294 (423)
+|++++||||||.+++.+++++|++. |+++|+||+|.+|... .....+...++++++.|+||. +++|+|+||
T Consensus 160 ~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~-~~~G~r~G~ 237 (367)
T 3euc_A 160 IVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQE-SWMSRLTDFGNLLVMRTVSKL-GLAGIRLGY 237 (367)
T ss_dssp EEEEESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSC-CSGGGGGTCTTEEEEEECCCT-TSCSCCEEE
T ss_pred EEEEcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhccc-chHHHHhhCCCEEEEecchhh-cccccCcee
Confidence 99999999999999999988888652 5999999999988743 334455567899999999998 899999999
Q ss_pred cccCHHHHHHHHHhcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCC
Q 014492 295 GAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGM 374 (423)
Q Consensus 295 i~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~ 374 (423)
+++++++++.+......++.+.+++.++..+|++.+++++.+++++++++++.+.|++++++.+.++.++|+|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~--- 314 (367)
T 3euc_A 238 VAGDPQWLEQLDKVRPPYNVNVLTEATALFALEHVAVLDEQAAQLRAERSRVAEGMAAHGGVTVFPSAANFLLARVP--- 314 (367)
T ss_dssp EEECHHHHHHHGGGCCSSCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSTTCEECCCSSSEEEEECS---
T ss_pred eeeCHHHHHHHHHhCCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEECCCCCeEEEEECC---
Confidence 99999999999888888999999999999999998889999999999999999999998767788899999999996
Q ss_pred CHHHHHHHHHhCCcEEEeCCC--CCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 375 DAKKLKDDLAKMGVMIRHYNN--KELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 375 ~~~~l~~~L~~~gI~v~~~~~--~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
+..++.+.|.++||.++++.. ...++++||++++.++++++.++|+++
T Consensus 315 ~~~~l~~~l~~~gi~v~~~~~~~~~~~~~iRis~~~~~~i~~~~~~l~~~ 364 (367)
T 3euc_A 315 DAAQTFDRLLARKVLIKNVSKMHPLLANCLRVTVSTPEENAQFLEAFAAS 364 (367)
T ss_dssp CHHHHHHHHHTTTEECEECGGGCGGGTTEEEEECCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCeEEEECCccCCCCCCEEEEecCCHHHHHHHHHHHHHH
Confidence 788999999999999998775 334789999999988899999988764
No 7
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=100.00 E-value=2.2e-46 Score=359.89 Aligned_cols=318 Identities=26% Similarity=0.359 Sum_probs=280.1
Q ss_pred CCCCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCC
Q 014492 93 KPEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD 171 (423)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd 171 (423)
...++|+|+.|+|+++++|.+.+++.+. ....+||+++..++|+++++++|+++++|++|+|+++++.+++..+ +||
T Consensus 14 ~~~~~i~l~~n~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~l~~~~~~~--~gd 91 (337)
T 3p1t_A 14 AAAQAVCLAFNENPEAVEPRVQAAIAAAAARINRYPFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF--SSM 91 (337)
T ss_dssp CCCCCEECSSCCCCSCCCHHHHHHHHHHGGGTTSCCTTHHHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHS--TTS
T ss_pred CCCCceEeeCCCCCCCCCHHHHHHHHHhhhhhccCCCCchHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHhc--CCC
Confidence 3467899999999999999999999873 3447788888999999999999999999999999999999999977 899
Q ss_pred eEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEE
Q 014492 172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILV 250 (423)
Q Consensus 172 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~l 250 (423)
+|+++.|+|..+...++..|++++.+|.++++.+|++++++. .+++++++++||||||.+++.+++.+|++. +. +
T Consensus 92 ~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~---~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~-~ 167 (337)
T 3p1t_A 92 RFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQV---SRDDCVVLANPSNPTGQALSAGELDQLRQRAGK-L 167 (337)
T ss_dssp EEEEESSSCSHHHHHHTTSCCEEEEECBCTTSSBCHHHHTTC---CTTEEEEEESSCTTTCCCCCHHHHHHHHHHCSE-E
T ss_pred eEEEeCCCcHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHhh---cCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCc-E
Confidence 999999999999999999999999999888889999999876 368999999999999999999999999997 65 6
Q ss_pred EEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCcHHHHHHHHHHhCChH
Q 014492 251 VLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPI 330 (423)
Q Consensus 251 i~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~ 330 (423)
|+||+|.+|...... .....+++++++|+||.+|++|+|+||+++++++++.+.+....++.+.+++.++..+|++.+
T Consensus 168 ivDea~~~~~~~~~~--~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~ 245 (337)
T 3p1t_A 168 LIDETYVDYSSFRAR--GLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQWFCNVGTLDLHALEAALDNDR 245 (337)
T ss_dssp EEECTTGGGSSCSSS--CCCCBTTEEEEEESSSTTCCTTTCCEEEECCHHHHHHHHTTSCTTCSCHHHHHHHHHHHTCHH
T ss_pred EEECCChhhcccccc--ccccCCCEEEEeeCchhccCcchheEEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHHHhCCHH
Confidence 779999987754321 123457889999999999999999999999999999998888888999999999999999877
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChh
Q 014492 331 YLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPE 410 (423)
Q Consensus 331 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~ 410 (423)
++++.++++.++++++.+.|++++ +.+.++.++|+|+..+ +..++.+.|.++||.++++..+..++++||++++.+
T Consensus 246 ~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~---~~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~~~~ 321 (337)
T 3p1t_A 246 AREAHIAKTLAQRRRVADALRGLG-YRVASSEANFVLVENA---AGERTLRFLRERGIQVKDAGQFGLHHHIRISIGREE 321 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT-CCBCCCSSSEEEEECT---TTHHHHHHHHHTTEECEEGGGGTCCSEEEEECCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCc-CEECCCCCeEEEEEcC---CHHHHHHHHHHCCeEEEECccCCCCCeEEEecCCHH
Confidence 777888888889999999999885 5666778889998886 346788888899999999887666899999999988
Q ss_pred hHHHHHHHHhhh
Q 014492 411 HTDALMECLMHL 422 (423)
Q Consensus 411 ~~~~l~~al~~l 422 (423)
++++|.++|+++
T Consensus 322 ~~~~l~~al~~~ 333 (337)
T 3p1t_A 322 DNDRLLAALAEY 333 (337)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999876
No 8
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=100.00 E-value=5.4e-46 Score=361.45 Aligned_cols=344 Identities=26% Similarity=0.384 Sum_probs=290.2
Q ss_pred cCCCCCCCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHhCCCCCcEEEe
Q 014492 74 LKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVG 152 (423)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t 152 (423)
+.+|.++..+..++.+++.+++++|+|+.|++++++++++.+++.+. ....+|++.+..++|+++++++++++++|++|
T Consensus 3 ~~~~~~g~~~~~~~~~~~~~~~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~l~~~la~~~~~~~~~v~~~ 82 (364)
T 1lc5_A 3 LFNTAHGGNIREPATVLGISPDQLLDFSANINPLGMPVSVKRALIDNLDCIERYPDADYFHLHQALARHHQVPASWILAG 82 (364)
T ss_dssp CCCCSSSCCCHHHHHHHTSCGGGSEECSSCCCTTCCCHHHHHHHHHTGGGGGSCCCTTCHHHHHHHHHHHTSCGGGEEEE
T ss_pred CcccCCCccHHHHHHhcCCCccceEEeccccCCCCCCHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHCcCHHHEEEC
Confidence 34455555566667778877778999999999999999999998873 33367887788999999999999988999999
Q ss_pred CCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCC-HHHHHHHhhcCCceEEEEcCCCCCc
Q 014492 153 CGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLN-VELIADAVEREKPKCIFLTSPNNPD 231 (423)
Q Consensus 153 ~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d-~~~l~~~i~~~~~~~i~l~~p~NPt 231 (423)
+|+++++..+++.+ +||+|+++.|+|..+...++..|++++.+|.+.+.+++ ++++.+.+. .+++++++++|+|||
T Consensus 83 ~g~~~al~~~~~~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~l~~~~~~~~-~~~~~v~i~~p~npt 159 (364)
T 1lc5_A 83 NGETESIFTVASGL--KPRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQLTDAILEALT-PDLDCLFLCTPNNPT 159 (364)
T ss_dssp SSHHHHHHHHHHHH--CCSEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCTTHHHHCC-TTCCEEEEESSCTTT
T ss_pred CCHHHHHHHHHHHc--CCCeEEEeCCCcHHHHHHHHHcCCeEEEEeCCcccccchhHHHHHhcc-CCCCEEEEeCCCCCC
Confidence 99999999999988 78999999999999999999999999999975422333 466666664 678999999999999
Q ss_pred CcCCCHHHHHHHHc---C-CCEEEEccCCccccCCC-chhhhhccCCcEEEEccChhhhcccCccccccc-cCHHHHHHH
Q 014492 232 GSIINDEDLLKILE---M-PILVVLDEAYTEFSGLE-SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA-FPLSIIEYL 305 (423)
Q Consensus 232 G~~~~~~~l~~i~~---~-~~~li~Deay~~~~~~~-~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~-~~~~~~~~l 305 (423)
|.+++.+++++|++ . |+++|+||+|.++.+++ ......+..+++++++|+||.+|++|+|+||++ +++++++.+
T Consensus 160 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l 239 (364)
T 1lc5_A 160 GLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARM 239 (364)
T ss_dssp CCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhhhcCcEEEEECcChhhccCccchhhHhccCCCEEEEEECchhhcCCccceEEEEECCHHHHHHH
Confidence 99999766666655 3 99999999999887643 233334456789999999999999999999999 999999999
Q ss_pred HHhcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHh
Q 014492 306 WRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAK 385 (423)
Q Consensus 306 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~ 385 (423)
......++.+++++.++.++|++.+++++.+++++++++++.+.|++++++.+.++.++|+|+++++ +..++.+.|.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~--~~~~l~~~l~~ 317 (364)
T 1lc5_A 240 RRQQMPWSVNALAALAGEVALQDSAWQQATWHWLREEGARFYQALCQLPLLTVYPGRANYLLLRCER--EDIDLQRRLLT 317 (364)
T ss_dssp HHHSCTTCSCHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHHTSTTEEECCCSSSEEEEEESC--TTCCHHHHHHT
T ss_pred HHhCCCCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcCCCCEECCCCCeEEEEECCC--cHHHHHHHHHH
Confidence 8888889999999999999999888899999999999999999999886677778889999999974 34578899999
Q ss_pred CCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 386 MGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 386 ~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
+||.++++..+ ..++++||+++..++++++.++++++
T Consensus 318 ~gi~v~~g~~~~~~~~~~iRis~~~~~~~~~l~~~l~~~ 356 (364)
T 1lc5_A 318 QRILIRSCANYPGLDSRYYRVAIRSAAQNERLLAALRNV 356 (364)
T ss_dssp TTEECEECTTSTTCCTTEEEEECCCHHHHHHHHHHHHHH
T ss_pred CCcEEeeCcccCCCCCCEEEEEeCCHHHHHHHHHHHHHH
Confidence 99999998763 23689999999988888999999875
No 9
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=100.00 E-value=1.5e-46 Score=368.19 Aligned_cols=326 Identities=24% Similarity=0.362 Sum_probs=274.2
Q ss_pred CCCCeeEcCCCCCCCCCCHHHHHHHhcC-C-CCCCCCCc-chHHHHHHHHHHh----C--CCCCcEEEeCCHHHHHHHHH
Q 014492 93 KPEDIVKIDANENPYGPPPEVREALGQL-K-FPYIYPDP-ESRRLRAALAKDS----G--LESDHILVGCGADELIDLIM 163 (423)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Y~~~-g~~~lr~~ia~~~----g--~~~~~i~~t~G~~~al~~~~ 163 (423)
.+.++|+|+.|++++++++.+.+++.+. . ....|++. |..++|+++++++ | +++++|++|+|+++++.+++
T Consensus 29 ~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~g~~~al~~~~ 108 (385)
T 1b5p_A 29 QGVDLVALTAGEPDFDTPEHVKEAARRALAQGKTKYAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLF 108 (385)
T ss_dssp TTCCCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHTTCCCCCGGGEEEESHHHHHHHHHH
T ss_pred cCCCEEEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHHEEEcCChHHHHHHHH
Confidence 3467899999999999899998887652 2 22568654 7899999999987 4 46789999999999999999
Q ss_pred HHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHH
Q 014492 164 RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL 241 (423)
Q Consensus 164 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~ 241 (423)
++++++||+|+++.|+|..|...++..|++++.+|.+ +++.+|++++++.+. .++++|++++||||||.+++.++++
T Consensus 109 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~p~NPtG~~~~~~~l~ 187 (385)
T 1b5p_A 109 QAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAIT-PRTKALVVNSPNNPTGAVYPKEVLE 187 (385)
T ss_dssp HHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCC-TTEEEEEEESSCTTTCCCCCHHHHH
T ss_pred HHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCcccCCCCCHHHHHHhcC-CCCEEEEEeCCCCCCCCCcCHHHHH
Confidence 9999999999999999999999999999999999976 367899999999996 5799999999999999999988887
Q ss_pred HHHcC----CCEEEEccCCccccCCCc--hhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC--CC
Q 014492 242 KILEM----PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YN 313 (423)
Q Consensus 242 ~i~~~----~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~--~~ 313 (423)
+|++. |++||+||+|.++.+++. ....+.. +++++++||||.||++|+|+||+++++++++.+.+.... ++
T Consensus 188 ~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~i~~~s~SK~~~~~G~RiG~~~~~~~~~~~l~~~~~~~~~~ 266 (385)
T 1b5p_A 188 ALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAP-EHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAMASVSRQSTTS 266 (385)
T ss_dssp HHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCT-TTEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHTTTCS
T ss_pred HHHHHHHHcCCEEEEEccchhcccCCCCCCHHHcCC-CCEEEEEechhhcCCcccceEEEEeCHHHHHHHHHHHhhccCC
Confidence 77664 999999999999876431 1222323 789999999999999999999999999999988876543 57
Q ss_pred CcHHHHHHHHHHhCC----hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeC-CCCCHHHHHHHHHhCCc
Q 014492 314 VSVAAEVAACAALQN----PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVT-SGMDAKKLKDDLAKMGV 388 (423)
Q Consensus 314 ~~~~~~~a~~~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~-~~~~~~~l~~~L~~~gI 388 (423)
++.++|.++.++|+. .+++++.+++++++++++.+.|+++++....|.+++|+|++++ .+.+..++.+.|.++||
T Consensus 267 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gv 346 (385)
T 1b5p_A 267 PDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPDEVRAAERLLEAGV 346 (385)
T ss_dssp CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCCSBTTEEEEECTTTCSSHHHHHHHHHHTTE
T ss_pred CCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeeEEEEEecCCCCCCHHHHHHHHHHCCe
Confidence 889999999999965 5678889999999999999999887432234667789999986 25688999999999999
Q ss_pred EEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 389 MIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 389 ~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.++++..++.++++||+++..+ +++.+++++|
T Consensus 347 ~v~~g~~f~~~~~iRis~~~~~--~~i~~~l~~l 378 (385)
T 1b5p_A 347 AVVPGTDFAAFGHVRLSYATSE--ENLRKALERF 378 (385)
T ss_dssp ECEESGGGTCTTEEEEECCSCH--HHHHHHHHHG
T ss_pred EEecccccCCCCeEEEEecCCH--HHHHHHHHHH
Confidence 9999876555789999999543 6688888876
No 10
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=100.00 E-value=1.6e-45 Score=357.17 Aligned_cols=323 Identities=27% Similarity=0.499 Sum_probs=285.6
Q ss_pred CCCCeeEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCC
Q 014492 93 KPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD 171 (423)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd 171 (423)
.++++|||+.|+++++++|++.+++.+ +....+||+.+..++|+++++++++++++|++|+|+++++..+++.+ |
T Consensus 24 ~~~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~l~~~la~~~~~~~~~i~~~~g~t~al~~~~~~~----d 99 (361)
T 3ftb_A 24 KGRELLDYSSNINPLGIPKSFLNNIDEGIKNLGVYPDVNYRRLNKSIENYLKLKDIGIVLGNGASEIIELSISLF----E 99 (361)
T ss_dssp ----CEETTCCCCTTCSCHHHHTTHHHHHHGGGSCCCTTCHHHHHHHHHHHTCCSCEEEEESSHHHHHHHHHTTC----S
T ss_pred CCCCEEEecCCCCCCCCCHHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHhCCCcceEEEcCCHHHHHHHHHHHc----C
Confidence 457789999999999999999988876 33346788888899999999999999999999999999999999976 8
Q ss_pred eEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC----C
Q 014492 172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----P 247 (423)
Q Consensus 172 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~ 247 (423)
+|+++.|+|..+...++..|++++.+|.+.+..++++++++.++ . ++++++++|+||||.+++.+++++|++. |
T Consensus 100 ~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~-~-~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~ 177 (361)
T 3ftb_A 100 KILIIVPSYAEYEINAKKHGVSVVFSYLDENMCIDYEDIISKID-D-VDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKK 177 (361)
T ss_dssp EEEEEESCCTHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHTT-T-CSEEEEETTBTTTTBCCCHHHHHHHHHHHHHHT
T ss_pred cEEEecCChHHHHHHHHHcCCeEEEeecCcccCCCHHHHHHhcc-C-CCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcC
Confidence 99999999999999999999999999987767889999999997 4 9999999999999999999998888873 9
Q ss_pred CEEEEccCCccccCC--CchhhhhccCCcEEEEccChhhhcccCccccccc-cCHHHHHHHHHhcCCCCCcHHHHHHHHH
Q 014492 248 ILVVLDEAYTEFSGL--ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA-FPLSIIEYLWRAKQPYNVSVAAEVAACA 324 (423)
Q Consensus 248 ~~li~Deay~~~~~~--~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~-~~~~~~~~l~~~~~~~~~~~~~~~a~~~ 324 (423)
+++|+||+|.++..+ ..........+++++++|+||.+|++|+|+||++ .++++++.+......++.+++++.++.+
T Consensus 178 ~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (361)
T 3ftb_A 178 KTIIIDEAFIEFTGDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKAKQNPWNINCFAEMAAIN 257 (361)
T ss_dssp CEEEEECSSGGGTCCTTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESCHHHHHHHHTTSCTTCSCHHHHHHHHH
T ss_pred CEEEEECcchhhcCCcccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCCHHHHHHHHhhCCCCCCCHHHHHHHHH
Confidence 999999999988864 2333444457889999999999999999999998 8999999999888889999999999999
Q ss_pred HhCChHHHHHHHHHHHHHHHHHHHHHccCCCCe-ecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC--CCCCe
Q 014492 325 ALQNPIYLEKVKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK--ELKGY 401 (423)
Q Consensus 325 ~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~--~~~~~ 401 (423)
+|++.+++++.+++++++++++.+.|++++++. +.++.++|+|+++++ .+..++.+.|.++||.++++..+ ..+++
T Consensus 258 ~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~ 336 (361)
T 3ftb_A 258 CLKDTNYIEESLLWIKKERKRFIEELNKIGFIKRVFSPHANFVLCRLEN-ISGEKLYDSLLKEDIVIRRCCNFIGLDDSF 336 (361)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEECCSSSEEEEEESS-SCHHHHHHHHHTTTEECEECTTSTTCCTTE
T ss_pred HhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCeEEEEEcCC-CCHHHHHHHHHHCCeEEeeCccCCCCCCCE
Confidence 999988999999999999999999999998777 778889999999984 68899999999889999998763 34689
Q ss_pred EEEEecChhhHHHHHHHHhhh
Q 014492 402 VRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 402 iRis~~~~~~~~~l~~al~~l 422 (423)
+||++++.++++++.++++++
T Consensus 337 iRis~~~~~~~~~l~~~l~~~ 357 (361)
T 3ftb_A 337 VRFAIKDEKKNTKFLRALKGV 357 (361)
T ss_dssp EEEECCCHHHHHHHHHHHHHH
T ss_pred EEEEcCCHHHHHHHHHHHHHH
Confidence 999999988889999999876
No 11
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=100.00 E-value=3.7e-45 Score=353.60 Aligned_cols=316 Identities=24% Similarity=0.377 Sum_probs=274.0
Q ss_pred CCCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCe
Q 014492 94 PEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK 172 (423)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~ 172 (423)
++++|||+.|+++++++|++.+++.+. ....+|+++...++|+++++++++++++|++|+|+++++.++++.++ ||+
T Consensus 14 g~~~id~~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~t~g~~~al~~~~~~l~--gd~ 91 (350)
T 3fkd_A 14 SSEIVNFSTTVWTDGDKDHLEKHLVENLNCIRHYPEPDAGTLRQMLAKRNSVDNNAILVTNGPTAAFYQIAQAFR--GSR 91 (350)
T ss_dssp --CCEECSCCSCCCSCCHHHHHHHHHTGGGGGSCCCTTCHHHHHHHHHHTTCCGGGEEEESHHHHHHHHHHHHTT--TCE
T ss_pred cccEEEccCCCCCCCCCHHHHHHHHHhHhHHhcCCCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHHC--CCE
Confidence 467899999999999999999998873 33367877655899999999999999999999999999999999887 999
Q ss_pred EEEcCCCchhhHHHHHHCCCeEEEecC-CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC--CCE
Q 014492 173 IVDCPPTFTMYEFDAAVNGAAVVKVPR-KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM--PIL 249 (423)
Q Consensus 173 Vl~~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~--~~~ 249 (423)
|+++.|+|..+...++..|++++.+|. ++..++++ .++++|++++|+||||.+++.+++.+|++. ..+
T Consensus 92 Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~---------~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~ 162 (350)
T 3fkd_A 92 SLIAIPSFAEYEDACRMYEHEVCFYPSNEDIGEADF---------SNMDFCWLCNPNNPDGRLLQRTEILRLLNDHPDTT 162 (350)
T ss_dssp EEEEESCCHHHHHHHHHTTCEEEEEETTSCGGGSCC---------TTCSEEEEESSCTTTCCCCCHHHHHHHHHHCTTSE
T ss_pred EEEeCCCcHHHHHHHHHcCCeEEEEecCCccccCcc---------CCCCEEEEeCCCCCcCCCCCHHHHHHHHHhCCCCE
Confidence 999999999999999999999999997 54344443 578999999999999999999999999986 479
Q ss_pred EEEccCCccccCCCc-hhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCcHHHHHHHHHHhCC
Q 014492 250 VVLDEAYTEFSGLES-RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQN 328 (423)
Q Consensus 250 li~Deay~~~~~~~~-~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~ 328 (423)
||+||+|.++.+.+. .....+..+++++++||||.+|++|+|+||+++++++++.+......++++.+++.++..+|++
T Consensus 163 li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 242 (350)
T 3fkd_A 163 FVLDQSYVSFTTEEVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANKDFMKRVAAFSTPWAVNALAIEAAKFILIH 242 (350)
T ss_dssp EEEECTTTTSCSSCCCCGGGGTTCSSEEEEEESHHHHSCGGGCCEEEECCHHHHHHHHTTCCTTCSCHHHHHHHHHHHHC
T ss_pred EEEECchhhhccCcchhhHHhhcCCCEEEEecCchhccCcchheEeEEeCHHHHHHHHHhCCCCCCCHHHHHHHHHHHhC
Confidence 999999998876443 2334456789999999999999999999999999999999999888899999999999999987
Q ss_pred hH-HHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHh-CCcEEEeCCCC--CCCCeEEE
Q 014492 329 PI-YLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAK-MGVMIRHYNNK--ELKGYVRV 404 (423)
Q Consensus 329 ~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~-~gI~v~~~~~~--~~~~~iRi 404 (423)
.+ |.++.++.. ++++++.+.|++++++.+.++.++|+|++++.. +..++.+.|.+ +||.++++..+ ..++++||
T Consensus 243 ~~~~~~~~~~~~-~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~L~~~~gi~v~~g~~f~~~~~~~iRi 320 (350)
T 3fkd_A 243 PAQFTLPIRKWQ-RNTVDFITALNRLDGVEVHPSGTTFFLLRLKKG-TAAELKKYMLEEYNMLIRDASNFRGLDESYVRI 320 (350)
T ss_dssp TTTTCCCHHHHH-HHHHHHHHHHHHSTTEEECCCSSSEEEEEESSS-CHHHHHHHHHHTTCEECEECTTSTTCCTTEEEE
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHhcCCCcEECCCCCcEEEEECCCC-CHHHHHHHHHHHCCEEEEeCccCCCCCCCEEEE
Confidence 65 555555554 889999999998877778888999999999865 88999999997 99999998764 33789999
Q ss_pred EecChhhHHHHHHHHhhh
Q 014492 405 SVGKPEHTDALMECLMHL 422 (423)
Q Consensus 405 s~~~~~~~~~l~~al~~l 422 (423)
++++.+++++|.++|+++
T Consensus 321 s~~~~~~~~~l~~al~~~ 338 (350)
T 3fkd_A 321 TTQRPAQNQLFIKALETF 338 (350)
T ss_dssp ECCCHHHHHHHHHHHHHH
T ss_pred EcCCHHHHHHHHHHHHHH
Confidence 999988889999999876
No 12
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=100.00 E-value=3.1e-45 Score=352.13 Aligned_cols=309 Identities=30% Similarity=0.469 Sum_probs=270.2
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhcCC---CCCCCCCcchHHHHHHHHHHhC---CCCCcEEEeCCHHHHHHHHHHHhcC
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQLK---FPYIYPDPESRRLRAALAKDSG---LESDHILVGCGADELIDLIMRCVLD 168 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~~---~~~~Y~~~g~~~lr~~ia~~~g---~~~~~i~~t~G~~~al~~~~~~l~~ 168 (423)
.++++|+.|++++++++++.+++.+.. ..++|++.+..++|++++++++ +++++|++|+|+++++..+++.+
T Consensus 19 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~lr~~la~~~~~~~~~~~~v~~~~G~~~al~~~~~~~-- 96 (335)
T 1uu1_A 19 RDKTYLALNENPFPFPEDLVDEVFRRLNSDALRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMF-- 96 (335)
T ss_dssp CCSEEESSCCCSSCCCHHHHHHHHHTCCGGGGGSCCCSSCHHHHHHHHHHHTCSSCCGGGEEEESSHHHHHHHHHHHS--
T ss_pred CcceECCCCCCCCCCCHHHHHHHHHHhhhhhhhcCCCCchHHHHHHHHHHcCCCCCCHHHEEEcCChHHHHHHHHHHh--
Confidence 467999999999999999999998732 2356887778999999999999 88899999999999999999977
Q ss_pred CCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-C
Q 014492 169 PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-P 247 (423)
Q Consensus 169 ~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~ 247 (423)
||+|+++ |+|..+...++..|++++.+|.++++.+|++++ .++++|++++||||||.+++.+++.+|++. |
T Consensus 97 -gd~Vl~~-p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l------~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~ 168 (335)
T 1uu1_A 97 -DRSVFFP-PTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVNV------GEGDVVFIPNPNNPTGHVFEREEIERILKTGA 168 (335)
T ss_dssp -SEEEECS-SSCHHHHHHHHHHTCEEEECCCCTTSCCCCCCC------CTTEEEEEESSCTTTCCCCCHHHHHHHHHTTC
T ss_pred -CCcEEEC-CCcHHHHHHHHHcCCeEEEeccCCCCCCCHHHc------CCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC
Confidence 8999999 999999999999999999999877778888776 478999999999999999999999999998 9
Q ss_pred CEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCcHHHHHHHHHHhC
Q 014492 248 ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQ 327 (423)
Q Consensus 248 ~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~ 327 (423)
++|+||+|.++... .....++..+++++++|+||.+|++|+|+||+++++++++.+......++.+.+++.++.++|+
T Consensus 169 -~li~De~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~ 246 (335)
T 1uu1_A 169 -FVALDEAYYEFHGE-SYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVRLPFNVSYVSQMFAKVALD 246 (335)
T ss_dssp -EEEEECTTHHHHCC-CCGGGGGTCSSEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHSCTTCSCHHHHHHHHHHHH
T ss_pred -EEEEECcchhhcch-hHHHHhhhCCCEEEEecchhhcCCcccCeEEEEeCHHHHHHHHHhcCCCCcCHHHHHHHHHHhC
Confidence 99999999987643 3333345577899999999999999999999999999999998888889999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec
Q 014492 328 NPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG 407 (423)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~ 407 (423)
+.+++++.+++++++++++.+.|++++ +.+.|++++|+|+++++ .+..++.+.|.++||.++++ ++++||+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~v~~~-----~~~iRis~~ 319 (335)
T 1uu1_A 247 HREIFEERTKFIVEERERMKSALREMG-YRITDSRGNFVFVFMEK-EEKERLLEHLRTKNVAVRSF-----REGVRITIG 319 (335)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHT-CCBCCCCSSEEEEECCT-HHHHHHHHHHHHHTEEEEEE-----TTEEEEECC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCC-cEEcCCCCeEEEEECCC-CCHHHHHHHHHHCCEEEEEC-----CCeEEEEeC
Confidence 877889999999999999999998874 45567889999999974 46778999999999999982 579999999
Q ss_pred ChhhHHHHHHHHhhh
Q 014492 408 KPEHTDALMECLMHL 422 (423)
Q Consensus 408 ~~~~~~~l~~al~~l 422 (423)
..++++++.++|+++
T Consensus 320 ~~~~i~~~~~~l~~~ 334 (335)
T 1uu1_A 320 KREENDMILRELEVF 334 (335)
T ss_dssp CHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHhh
Confidence 887777777777653
No 13
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=100.00 E-value=1.7e-44 Score=351.58 Aligned_cols=319 Identities=28% Similarity=0.473 Sum_probs=279.4
Q ss_pred eEcCCCCCCCCCCHHHHHHHhcC-C----CCCCCCCcchHHHHHHHHHH------hCCCCCcEEEeCCHHHHHHHHHHHh
Q 014492 98 VKIDANENPYGPPPEVREALGQL-K----FPYIYPDPESRRLRAALAKD------SGLESDHILVGCGADELIDLIMRCV 166 (423)
Q Consensus 98 i~l~~~~~~~~~~~~v~~al~~~-~----~~~~Y~~~g~~~lr~~ia~~------~g~~~~~i~~t~G~~~al~~~~~~l 166 (423)
|||+.|++++++++++.+++.+. . ...+|++....++|++++++ +++++++|++|+|+++++..+++++
T Consensus 33 idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~~~~~~l 112 (369)
T 3cq5_A 33 IRLNTNENPYPPSEALVADLVATVDKIATELNRYPERDAVELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAF 112 (369)
T ss_dssp EECSSCCCCSCCCHHHHHHHHHHHHHHGGGTTSCCCTTCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHH
T ss_pred eeccCCCCCCCCCHHHHHHHHHHHHhcccccccCCCccHHHHHHHHHHhhhhcccCCCChHhEEECCChHHHHHHHHHHh
Confidence 99999999999999999888762 1 13678766447999999999 5667889999999999999999999
Q ss_pred cCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC
Q 014492 167 LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM 246 (423)
Q Consensus 167 ~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~ 246 (423)
+++||+|+++.|+|+.+...++..|++++.+|.++++.+|++++++.+.+.++++|++++|+||||.+++.+++.+|++.
T Consensus 113 ~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~ 192 (369)
T 3cq5_A 113 GGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINV 192 (369)
T ss_dssp CSTTCEEEEEESSCTHHHHHHHHTTCEEEEEECCTTSSCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred cCCCCEEEEcCCChHHHHHHHHHcCCEEEEecCCcCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHh
Confidence 99999999999999999999999999999999877788999999999974379999999999999999999999999997
Q ss_pred -CCEEEEccCCccccCCCchhhhhccCC-cEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCcHHHHHHHHH
Q 014492 247 -PILVVLDEAYTEFSGLESRMEWVKKHD-NLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACA 324 (423)
Q Consensus 247 -~~~li~Deay~~~~~~~~~~~~~~~~~-~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~~~~~a~~~ 324 (423)
++++|+||+|.++....+.....+..+ +++++.|+||.+|++|+|+||+++++++++.+......++.+.+.+.++.+
T Consensus 193 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~ 272 (369)
T 3cq5_A 193 APGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPAFIDAVMLVRLPYHLSALSQAAAIV 272 (369)
T ss_dssp CSSEEEEECTTGGGCCSCCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECTHHHHHHHTTSCTTCSCHHHHHHHHH
T ss_pred CCCEEEEECCchhhcCCcchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCHHHHHHHHHcCCCCCCCHHHHHHHHH
Confidence 899999999998875433333334456 899999999999999999999999999999998888888999999999999
Q ss_pred HhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEE
Q 014492 325 ALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRV 404 (423)
Q Consensus 325 ~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRi 404 (423)
+|++.+++++.+++++++++++.+.|++.+ +.+.++.++|+|++++ .+..++.+.|.++||.+++++ .++++||
T Consensus 273 ~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~--~~~~~l~~~l~~~gi~v~~~~---~~~~iRi 346 (369)
T 3cq5_A 273 ALRHSADTLGTVEKLSVERVRVAARLEELG-YAVVPSESNFVFFGDF--SDQHAAWQAFLDRGVLIRDVG---IAGHLRT 346 (369)
T ss_dssp HHHTHHHHHTHHHHHHHHHHHHHHHHHHHT-CEEECCSSSEEEEECC--SSHHHHHHHHHHTTEECBCCS---CTTEEEE
T ss_pred HhcCHHHHHHHHHHHHHHHHHHHHHHHhCC-CEECCCCCeEEEEECC--CCHHHHHHHHHHCCEEEEECC---CCCeEEE
Confidence 998888889999999999999999998764 5556788899999986 578899999999999999872 3689999
Q ss_pred EecChhhHHHHHHHHhhh
Q 014492 405 SVGKPEHTDALMECLMHL 422 (423)
Q Consensus 405 s~~~~~~~~~l~~al~~l 422 (423)
++++.++++++.++|+++
T Consensus 347 s~~~~~~i~~~~~~l~~~ 364 (369)
T 3cq5_A 347 TIGVPEENDAFLDAAAEI 364 (369)
T ss_dssp ECCCHHHHHHHHHHHHHH
T ss_pred EeCCHHHHHHHHHHHHHH
Confidence 999888888888888764
No 14
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=100.00 E-value=1.8e-44 Score=354.04 Aligned_cols=334 Identities=20% Similarity=0.263 Sum_probs=275.5
Q ss_pred hHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcC-C-CCCCCCCc-chHHHHHHHHHHhC------CCCCcEEEeC
Q 014492 83 FEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-K-FPYIYPDP-ESRRLRAALAKDSG------LESDHILVGC 153 (423)
Q Consensus 83 ~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Y~~~-g~~~lr~~ia~~~g------~~~~~i~~t~ 153 (423)
+...+.++...++++|+|+.|+++++++|++.+++.+. . ...+|++. |..++|++++++++ +++++|++|+
T Consensus 19 ~~~~~~~~~~~g~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~v~~t~ 98 (391)
T 3h14_A 19 VMEAARRAEEAGRRIIHMEVGQPGTGAPRGAVEALAKSLETDALGYTVALGLPALRQRIARLYGEWYGVDLDPGRVVITP 98 (391)
T ss_dssp HHHHHHHHHHTTCCCEECCCSSCSSCSCHHHHHHHHHHHC----------CCHHHHHHHHHHHHHHHCCCCCGGGEEEES
T ss_pred HHHHHHHHHhcCCCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEec
Confidence 33345555556778999999999999999999998873 2 23567654 68999999999974 6789999999
Q ss_pred CHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC--CCCCCHHHHHHHhhcCCceEEEEcCCCCCc
Q 014492 154 GADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPD 231 (423)
Q Consensus 154 G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPt 231 (423)
|+++++..++++++++||+|+++.|+|..+...++..|++++.+|.+. ++.+|++++++. ++++|++++|+|||
T Consensus 99 g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~----~~~~v~i~~p~npt 174 (391)
T 3h14_A 99 GSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPADFAGL----DLAGLMVASPANPT 174 (391)
T ss_dssp SHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTSCCHHHHTTS----CCSEEEEESSCTTT
T ss_pred ChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCCCCHHHHHhc----CCeEEEECCCCCCC
Confidence 999999999999999999999999999999999999999999999753 467899999876 78999999999999
Q ss_pred CcCCCHHHHHHHHcC----CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHH
Q 014492 232 GSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR 307 (423)
Q Consensus 232 G~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~ 307 (423)
|.+++.+++++|++. |+++|+||+|.++.+++.........+++++++|+||.+|++|+|+||+++++++++.+.+
T Consensus 175 G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~ 254 (391)
T 3h14_A 175 GTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDECYVINSFSKYFSMTGWRVGWMVVPEDQVRVVER 254 (391)
T ss_dssp CCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCSSSEEEEESSSTTCCTTSCCEEEECCGGGHHHHHH
T ss_pred CccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcChhhcCCCEEEEEechhccCCccceeEEEEeCHHHHHHHHH
Confidence 999998877777653 9999999999998865543333334678899999999999999999999999999988876
Q ss_pred hcC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCC-CCCHHHHHHHH
Q 014492 308 AKQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS-GMDAKKLKDDL 383 (423)
Q Consensus 308 ~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~-~~~~~~l~~~L 383 (423)
... .++.+.+++.++.++++..+++++.+++++++++++.+.|+++++... .|.+++|+|++++. +.+..++.+.|
T Consensus 255 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 334 (391)
T 3h14_A 255 IAQNMFICAPHASQVAALAALDCDAELQANLDVYKANRKLMLERLPKAGFTRIAPPDGAFYVYADVSDLTDDSRAFAAEI 334 (391)
T ss_dssp HHHHTTCCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCBCCCCBTTEEEEECTTTCSCHHHHHHHH
T ss_pred HHhhhccCCCHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCeeEEEEEecCccCCCHHHHHHHH
Confidence 654 467899999999999988888999999999999999999998876553 56677899999986 57899999998
Q ss_pred Hh-CCcEEEeCCCCC---CCCeEEEEecChhhHHHHHHHHhhh
Q 014492 384 AK-MGVMIRHYNNKE---LKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 384 ~~-~gI~v~~~~~~~---~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
++ +||.++++..+. .++++||+++..+ +++.+++++|
T Consensus 335 ~~~~gi~v~~g~~~~~~~~~~~iRis~~~~~--~~i~~~l~~l 375 (391)
T 3h14_A 335 LEKAGVAVTPGLDFDPERGAGTLRFSYARAT--ADIEEGLDRL 375 (391)
T ss_dssp HHHHCEECEEGGGTCTTTGGGEEEEECCSCH--HHHHHHHHHH
T ss_pred HHHCCEEEcCchhhCCCCCCCeEEEEecCCH--HHHHHHHHHH
Confidence 75 599999987643 3679999998743 6677777665
No 15
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=100.00 E-value=1.5e-44 Score=355.04 Aligned_cols=326 Identities=21% Similarity=0.293 Sum_probs=274.0
Q ss_pred CCCCCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCc-chHHHHHHHHHHh----C---CCCC-cEEEeCCHHHHHHH
Q 014492 92 RKPEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDP-ESRRLRAALAKDS----G---LESD-HILVGCGADELIDL 161 (423)
Q Consensus 92 ~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~-g~~~lr~~ia~~~----g---~~~~-~i~~t~G~~~al~~ 161 (423)
.+++++|+|+.|+++++++|.+.+++.+. ....+|++. |..++|+++++++ | ++++ +|++|+|+++++..
T Consensus 27 ~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~~i~~t~g~~~al~~ 106 (396)
T 3jtx_A 27 PEGMEAVPLHIGEPKHPTPKVITDALTASLHELEKYPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREALFS 106 (396)
T ss_dssp CTTCCCEECSCCSCCSCCCHHHHHHHHHTGGGGGSCCCTTCCHHHHHHHHHHHHHHTTTCCCCTTTSEEEESSHHHHHHH
T ss_pred ccCCCeEEeCCcCCCCCCCHHHHHHHHHHhhhccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCeEEEcCCcHHHHHH
Confidence 34678999999999999999999999873 333678664 6889999999886 6 4588 99999999999999
Q ss_pred HHHHhcCCC-----CeEEEcCCCchhhHHHHHHCCCeEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCC
Q 014492 162 IMRCVLDPG-----DKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII 235 (423)
Q Consensus 162 ~~~~l~~~g-----d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~ 235 (423)
+++.++++| |+|+++.|+|..+...++..|++++.+|.+ +++.+|++++++++. .++++|++++||||||.++
T Consensus 107 ~~~~~~~~g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~g~~~d~~~l~~~~~-~~~~~v~l~~p~nptG~~~ 185 (396)
T 3jtx_A 107 FVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANCPAPSFNPDWRSISEEVW-KRTKLVFVCSPNNPSGSVL 185 (396)
T ss_dssp HHHHHCCC---CCCCEEEEEESCCHHHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHH-HTEEEEEEESSCTTTCCCC
T ss_pred HHHHHhCCCCccCCCEEEEcCCCcHhHHHHHHHcCCEEEEeecCCCCCccCHHHHHHhhc-cCcEEEEEECCCCCCCCcC
Confidence 999999997 799999999999999999999999999973 456789999999997 4899999999999999999
Q ss_pred CHHHHHHHHcC----CCEEEEccCCccccCCC-chhhhh-------ccCCcEEEEccChhhhcccCccccccccCHHHHH
Q 014492 236 NDEDLLKILEM----PILVVLDEAYTEFSGLE-SRMEWV-------KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 303 (423)
Q Consensus 236 ~~~~l~~i~~~----~~~li~Deay~~~~~~~-~~~~~~-------~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~ 303 (423)
+.+++++|++. |+++|+||+|.++.+.+ ...... ...++++++.|+||.|+++|+|+||+++++++++
T Consensus 186 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~ 265 (396)
T 3jtx_A 186 DLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDAELLK 265 (396)
T ss_dssp CHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEEEECHHHHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEeccccccCCcccceEEEEeCHHHHH
Confidence 99997777664 99999999999987654 222211 1368899999999999999999999999999999
Q ss_pred HHHHhcC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHH
Q 014492 304 YLWRAKQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKD 381 (423)
Q Consensus 304 ~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~ 381 (423)
.+..... .++.+.+++.++..+|++.+++++.+++++++++++.+.|+++. ....|.+++|+|++++. .+..++.+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~ 343 (396)
T 3jtx_A 266 NFLLYRTYHGSAMSIPVQRASIAAWDDEQHVIDNRRLYQEKFERVIPILQQVF-DVKLPDASFYIWLKVPD-GDDLAFAR 343 (396)
T ss_dssp HHHHHHHHHTCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTTS-CCCCCSSSSEEEEECTT-SCHHHHHH
T ss_pred HHHHHHhhcccCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhcC-CccCCCeeEEEEEECCC-CCHHHHHH
Confidence 8887654 47889999999999999888999999999999999999998862 22356788999999974 57889999
Q ss_pred HHH-hCCcEEEeCCCC--------CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 382 DLA-KMGVMIRHYNNK--------ELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 382 ~L~-~~gI~v~~~~~~--------~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.|. ++||.+.++..+ ...+++||+++.. .+++.+++++|
T Consensus 344 ~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~~--~~~i~~~l~~l 391 (396)
T 3jtx_A 344 NLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVAD--VATCVKAAEDI 391 (396)
T ss_dssp HHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECCSC--HHHHHHHHHHH
T ss_pred HHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEcCC--HHHHHHHHHHH
Confidence 986 679999987653 2468999999863 36677777765
No 16
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=6e-44 Score=348.43 Aligned_cols=326 Identities=18% Similarity=0.255 Sum_probs=274.3
Q ss_pred CCCCCeeEcCCCCCCCCCCHHHHHHHhcC-CC--CCCCCCc-chHHHHHHHHHHh----CCC--CC-cEEEeCCHHHHHH
Q 014492 92 RKPEDIVKIDANENPYGPPPEVREALGQL-KF--PYIYPDP-ESRRLRAALAKDS----GLE--SD-HILVGCGADELID 160 (423)
Q Consensus 92 ~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~--~~~Y~~~-g~~~lr~~ia~~~----g~~--~~-~i~~t~G~~~al~ 160 (423)
.++.++|+|+.|+++++++|.+.+++.+. .. .++|++. +..++|+++++++ |++ ++ +|++|+|+++++.
T Consensus 22 ~~g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~a~~ 101 (376)
T 2dou_A 22 ERGVGLIDLSIGSTDLPPPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQEGLA 101 (376)
T ss_dssp HTTCCCEECSSCCCCCCCCHHHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHHHHH
T ss_pred ccCCCEEeccCCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHH
Confidence 34567899999999999999999998763 22 3678774 7889999999998 864 45 9999999999999
Q ss_pred HHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHH
Q 014492 161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL 240 (423)
Q Consensus 161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l 240 (423)
.++++++++||+|+++.|+|..+...++..|++++.+|.++++.+|++++++.+. .++++|++++||||||.+++.+++
T Consensus 102 ~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~~~~l 180 (376)
T 2dou_A 102 HLLLALTEPEDLLLLPEVAYPSYFGAARVASLRTFLIPLREDGLADLKAVPEGVW-REAKVLLLNYPNNPTGAVADWGYF 180 (376)
T ss_dssp HHHHHHCCTTCEEEEESSCCHHHHHHHHHTTCEEEEECBCTTSSBCGGGSCHHHH-HHEEEEEECSSCTTTCCCCCHHHH
T ss_pred HHHHHhcCCCCEEEECCCCcHhHHHHHHHcCCEEEEeeCCCCCCCCHHHHHHhhc-cCceEEEECCCCCCcCccCCHHHH
Confidence 9999999999999999999999999999999999999986666789999999886 578999999999999999998887
Q ss_pred HHHHcC----CCEEEEccCCccccCCCc---hhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC--
Q 014492 241 LKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP-- 311 (423)
Q Consensus 241 ~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~-- 311 (423)
++|++. |+++|+||+|.++.+++. .....+..+++++++|+||.+|++|+|+||+++++++++.+......
T Consensus 181 ~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~ 260 (376)
T 2dou_A 181 EEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSEEALARLERVKGVID 260 (376)
T ss_dssp HHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEECHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecCHHHHHHHHHHHHhcc
Confidence 776653 999999999999876432 22222335789999999999999999999999999999988765543
Q ss_pred CCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeec-CCCceEEEEEeCCCCCHHHHHHHHHhCCcE
Q 014492 312 YNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPY-PSYSNFILCEVTSGMDAKKLKDDLAKMGVM 389 (423)
Q Consensus 312 ~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~ 389 (423)
++.+.+++.++.++|++ .+++++.+++++++++++.+.|+++ +.+. +.+++|+|++++++.+..++.+.|.++||.
T Consensus 261 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~ 338 (376)
T 2dou_A 261 FNQYAGVLRMGVEALKTPKEVVRGYARVYRERALGMAEALKGV--LSLLPPRATMYLWGRLPEGVDDLEFGLRLVERGVA 338 (376)
T ss_dssp CCSCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHTTT--SEECCCCBSSEEEEECCTTCCHHHHHHHHHHTTEE
T ss_pred cCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHh--cCccCCCeeEEEEEECCCCCCHHHHHHHHHHCCEE
Confidence 56789999999999988 6788999999999999999999987 4443 556789999998777888999999988999
Q ss_pred EEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014492 390 IRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 390 v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
++++..+. .++++||+++.. .+++.+++++|
T Consensus 339 v~~g~~f~~~~~~~~Ris~~~~--~~~i~~~l~~l 371 (376)
T 2dou_A 339 LAPGRGFGPGGKGFVRIALVRP--LEELLEAAKRI 371 (376)
T ss_dssp CEEGGGGCGGGTTEEEEECCSC--HHHHHHHHHHH
T ss_pred EcCchhhCCCCCCeEEEEecCC--HHHHHHHHHHH
Confidence 99876533 368999999863 36677777665
No 17
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=100.00 E-value=8.6e-44 Score=347.14 Aligned_cols=318 Identities=21% Similarity=0.250 Sum_probs=268.5
Q ss_pred CCCCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCc-chHHHHHHHHHHh----CC--CCCcEEEeCCHHHHHHHHHH
Q 014492 93 KPEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDP-ESRRLRAALAKDS----GL--ESDHILVGCGADELIDLIMR 164 (423)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~-g~~~lr~~ia~~~----g~--~~~~i~~t~G~~~al~~~~~ 164 (423)
.+ ++|+|+.|++++++++.+.+++.+. .....|++. +..++|+++++++ |+ ++++|++|+|+++++..+++
T Consensus 22 ~g-~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~t~g~~~al~~~~~ 100 (376)
T 3ezs_A 22 KK-RGLDLGIGEPQFETPKFIQDALKNHTHSLNIYPKSAFEESLRAAQRGFFKRRFKIELKENELISTLGSREVLFNFPS 100 (376)
T ss_dssp SS-CCCBCSSCCCCSCCCHHHHHHHHTTGGGGGSCCCTTCCHHHHHHHHHHHHHHHSCCCCGGGEEEESSSHHHHHHHHH
T ss_pred cC-CEEEeCCCCCCCCCCHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEECcCcHHHHHHHHH
Confidence 44 8899999999999999999999874 333678664 6889999999987 76 78999999999999999999
Q ss_pred HhcCC--CCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHH
Q 014492 165 CVLDP--GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK 242 (423)
Q Consensus 165 ~l~~~--gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~ 242 (423)
.++++ ||+|+++.|+|..+...++..|++++.+|.+++.++++ ++++.+. .++++|++++||||||.+++.+++++
T Consensus 101 ~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~l~~~~~-~~~~~v~~~~p~nptG~~~~~~~l~~ 178 (376)
T 3ezs_A 101 FVLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLMPLTKENDFTP-SLNEKEL-QEVDLVILNSPNNPTGRTLSLEELIS 178 (376)
T ss_dssp HHTTTCSSCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTSCC-CCCHHHH-HHCSEEEECSSCTTTCCCCCHHHHHH
T ss_pred HHcCCCCCCEEEEecCCcHhHHHHHHHcCCEEEEcccCCCCCcch-hHHhhhc-cCCCEEEEcCCCCCcCCCCCHHHHHH
Confidence 99999 99999999999999999999999999999765445555 6666665 47899999999999999999999888
Q ss_pred HHcC----CCEEEEccCCccccCCCchhhh---hc-----cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC
Q 014492 243 ILEM----PILVVLDEAYTEFSGLESRMEW---VK-----KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ 310 (423)
Q Consensus 243 i~~~----~~~li~Deay~~~~~~~~~~~~---~~-----~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~ 310 (423)
|++. |+++|+||+|.++.+++..... .. ..+++++++|+||.+|++|+|+||+++++++++.+.....
T Consensus 179 i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~ 258 (376)
T 3ezs_A 179 WVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGDSRLLEKYKAFRA 258 (376)
T ss_dssp HHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHHT
T ss_pred HHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhccCCccceeEEEeeCHHHHHHHHHHHh
Confidence 8663 9999999999998865432222 21 5789999999999999999999999999999999987765
Q ss_pred --CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHh-CC
Q 014492 311 --PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAK-MG 387 (423)
Q Consensus 311 --~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~-~g 387 (423)
.++.+.+++.++.+++++.+++++.+++++++++++.+.|+ + +. .|+.++|+|++++ +..++.+.|.+ +|
T Consensus 259 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~--~-~~-~~~~~~~~~~~~~---~~~~~~~~l~~~~g 331 (376)
T 3ezs_A 259 YLGYTSANAIQKASEAAWLDDRHAEFFRNIYANNLKLARKIFK--N-TL-IYPYSFYVYLPVQ---NGENFAKTLYQNEG 331 (376)
T ss_dssp TTCCCCCHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHST--T-CC-CCSBSSEEEEECS---CHHHHHHHHHHHHC
T ss_pred hhcCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhc--C-CC-CCCcceEEEEECC---CHHHHHHHHHHhCC
Confidence 47889999999999999888899999999999999999998 3 33 6788999999997 68899999986 89
Q ss_pred cEEEeCCCCC----CCCeEEEEecChhhHHHHHHHHhhh
Q 014492 388 VMIRHYNNKE----LKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 388 I~v~~~~~~~----~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
|.++++..+. .++++||+++.. .+++.+++++|
T Consensus 332 i~v~~g~~~~~~~~~~~~iRis~~~~--~~~i~~~l~~l 368 (376)
T 3ezs_A 332 IITLPALYLGRNRIGADYVRLALVYD--TPLLEKPLEII 368 (376)
T ss_dssp CBCEEGGGGCSTTTTTTEEEEECCSC--HHHHHHHHHHH
T ss_pred EEEeCcHHhCCCCCCCCeEEEEEcCC--HHHHHHHHHHH
Confidence 9999876532 578999999752 25555555544
No 18
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.8e-43 Score=349.51 Aligned_cols=333 Identities=22% Similarity=0.304 Sum_probs=270.4
Q ss_pred HHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcC-CC--CCCCC-CcchHHHHHHHHHHh----CC--CC-CcEEEeCCH
Q 014492 87 SIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-KF--PYIYP-DPESRRLRAALAKDS----GL--ES-DHILVGCGA 155 (423)
Q Consensus 87 ~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~--~~~Y~-~~g~~~lr~~ia~~~----g~--~~-~~i~~t~G~ 155 (423)
..+++..+.++|+|+.|++++++++.+.+++.+. .. .++|+ ..+..++|+++++++ |+ ++ ++|++|+|+
T Consensus 29 ~~~~~~~g~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~g~~~~~~~~v~~t~g~ 108 (412)
T 2x5d_A 29 KMAARRRGEDIIDLSMGNPDGPTPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGS 108 (412)
T ss_dssp HHHHHHTTCCCEECSSCCCCSCCCHHHHHHHHHTC---------CTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESCH
T ss_pred HHHHhhcCCCEEecCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCcCEEEcCCh
Confidence 3444455678999999999999999999998873 22 24684 567899999999998 74 66 699999999
Q ss_pred HHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC--CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCc
Q 014492 156 DELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGS 233 (423)
Q Consensus 156 ~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~ 233 (423)
++++..+++.++++||+|+++.|+|+.+...++..|++++.+|.++ ++.+|++++++.+. .++++|++++||||||.
T Consensus 109 ~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~-~~~~~v~l~~p~nptG~ 187 (412)
T 2x5d_A 109 KEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESI-PKPRMMILGFPSNPTAQ 187 (412)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHHTCEEEEEECSTTSCHHHHHHHHHHTEE-SCCSEEEEESSCTTTCC
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHhcc-cCceEEEECCCCCCCCC
Confidence 9999999999999999999999999999999999999999999754 34478999999997 68999999999999999
Q ss_pred CCCHHHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhc-cCCcEEEEccChhhhcccCccccccccCHHHHHHH
Q 014492 234 IINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYL 305 (423)
Q Consensus 234 ~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l 305 (423)
+++.+++++|++. |+++|+||+|.++.+.+. ....+. ..+++++++|+||.+|++|+|+||+++++++++.+
T Consensus 188 ~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l 267 (412)
T 2x5d_A 188 CVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGNPELVSAL 267 (412)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTSCCEEEEECHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccCCcccceEEEEcCHHHHHHH
Confidence 9998877777654 999999999999875331 122222 25789999999999999999999999999999988
Q ss_pred HHhcC--CCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCC---CHHHH
Q 014492 306 WRAKQ--PYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGM---DAKKL 379 (423)
Q Consensus 306 ~~~~~--~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~---~~~~l 379 (423)
..... .++.+.+++.++..+|+. .+++++.+++++++++++.+.|++++.....+.+++|+|++++.+. +..++
T Consensus 268 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 347 (412)
T 2x5d_A 268 ARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIARQYQQRRDVLVKGLREAGWMVENPKASMYVWAKIPEPYAHLGSLEF 347 (412)
T ss_dssp HHHHHHHCCCCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCSBSSEEEEECCTTTGGGCHHHH
T ss_pred HHHHhhhccCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEecCCCeeeEEEEEcCCccCCCCHHHH
Confidence 76544 478899999999999986 5788999999999999999999887432234555779999997665 78899
Q ss_pred HHHHH-hCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014492 380 KDDLA-KMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 380 ~~~L~-~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.+.|. ++||.++++..+. .++++||+++.. .+++.+++++|
T Consensus 348 ~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~~--~~~l~~~l~~l 391 (412)
T 2x5d_A 348 AKKLLQDAKVSVSPGIGFGDYGDDHVRFALIEN--RDRLRQAVRGI 391 (412)
T ss_dssp HHHHHHHHCEECEEGGGGCGGGTTEEEEECCSC--HHHHHHHHHHH
T ss_pred HHHHHHHCCEEEeCchhhCCCCCCeEEEEecCC--HHHHHHHHHHH
Confidence 99987 5799999886532 368999999873 36777777765
No 19
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=100.00 E-value=2.2e-43 Score=348.11 Aligned_cols=327 Identities=19% Similarity=0.260 Sum_probs=270.8
Q ss_pred CCCCeeEcCCCCCCCCCCHHHHHHHhcC-CC--CCCCCC-cchHHHHHHHHHHh----CCC--C-CcEEEeCCHHHHHHH
Q 014492 93 KPEDIVKIDANENPYGPPPEVREALGQL-KF--PYIYPD-PESRRLRAALAKDS----GLE--S-DHILVGCGADELIDL 161 (423)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~--~~~Y~~-~g~~~lr~~ia~~~----g~~--~-~~i~~t~G~~~al~~ 161 (423)
++.++|+|+.|+++++++|.+.+++.+. .. ..+|++ .+..++|+++++++ |++ + ++|++|+|+++++..
T Consensus 45 ~g~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G~~~al~~ 124 (404)
T 2o1b_A 45 GPLPLINMAVGIPDGPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNGLVA 124 (404)
T ss_dssp CSSCCEECCCCSCSSCCCHHHHHHHHHHTTCHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSHHHHHHH
T ss_pred CCCCEEecCCcCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCcccEEEcCCcHHHHHH
Confidence 4567899999999999899999998773 22 246866 47899999999998 864 4 799999999999999
Q ss_pred HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC-CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHH
Q 014492 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL 240 (423)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l 240 (423)
++++++++||+|+++.|+|..+...++..|++++.+|.+. ++.+|++++++.+. .++++|++++|+||||.+++.+++
T Consensus 125 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~~~~l 203 (404)
T 2o1b_A 125 VPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEPPHYLPDWSKVDSQII-DKTKLIYLTYPNNPTGSTATKEVF 203 (404)
T ss_dssp HHHHHCCTTCEEEEEESCCSSHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHH-HHEEEEEECSSCTTTCCCCCHHHH
T ss_pred HHHHhcCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCcccCcCCHHHHHHhhc-cCceEEEEcCCCCCCCccCCHHHH
Confidence 9999999999999999999999999999999999999764 56689999999886 578999999999999999998777
Q ss_pred HHHHc---C-CCEEEEccCCccccCCCch--hhhh-ccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC--C
Q 014492 241 LKILE---M-PILVVLDEAYTEFSGLESR--MEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--P 311 (423)
Q Consensus 241 ~~i~~---~-~~~li~Deay~~~~~~~~~--~~~~-~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~--~ 311 (423)
++|++ . |+++|+||+|.++.+++.. .... ...+++++++|+||.+|++|+|+||+++++++++.+..... .
T Consensus 204 ~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~~~ 283 (404)
T 2o1b_A 204 DEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGNKDMIQALKKYQTHTN 283 (404)
T ss_dssp HHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCCEEEEEecchhccCchhheEeEecCHHHHHHHHHHHhhcc
Confidence 66655 3 9999999999998764321 1111 12367899999999999999999999999999998876554 4
Q ss_pred CCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHH-hCCcE
Q 014492 312 YNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-KMGVM 389 (423)
Q Consensus 312 ~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~-~~gI~ 389 (423)
++.+.++|.++.++|++ .+++++.+++++++++++.+.|+++++....+.+++|+|++++++.+..++.+.|. ++||.
T Consensus 284 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~l~~~l~~~~gi~ 363 (404)
T 2o1b_A 284 AGMFGALQDAAIYALNHYDDFLEEQSNVFKTRRDRFEAMLAKADLPFVHAKGGIYVWLETPPGYDSEQFEQFLVQEKSIL 363 (404)
T ss_dssp CCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEECCCBSSEEEEECCTTCCHHHHHHHHHHHHCEE
T ss_pred CCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeecCCCcceEEEEeCCCCCCHHHHHHHHHHHCCEE
Confidence 68899999999999987 67899999999999999999999885333345567789999987778889999987 68999
Q ss_pred EEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014492 390 IRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 390 v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
++++..+. .++++||+++..+ +++.+++++|
T Consensus 364 v~~g~~f~~~~~~~iRis~~~~~--e~l~~~l~~l 396 (404)
T 2o1b_A 364 VAPGKPFGENGNRYVRISLALDD--QKLDEAAIRL 396 (404)
T ss_dssp CEESGGGCGGGTTEEEEECCSCT--THHHHHHHHH
T ss_pred EeCchhhCcCCCCeEEEEEcCCH--HHHHHHHHHH
Confidence 99986533 3689999998632 4566666654
No 20
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-43 Score=351.64 Aligned_cols=327 Identities=19% Similarity=0.317 Sum_probs=272.4
Q ss_pred CCCCeeEcCCCCCCCCCCHHHHHHHhc-CCC--CCCCCCc-chHHHHHHHHHHh----C--CCCCcEEEeCCHHHHHHHH
Q 014492 93 KPEDIVKIDANENPYGPPPEVREALGQ-LKF--PYIYPDP-ESRRLRAALAKDS----G--LESDHILVGCGADELIDLI 162 (423)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~--~~~Y~~~-g~~~lr~~ia~~~----g--~~~~~i~~t~G~~~al~~~ 162 (423)
.+.++|+|+.|.+++++++.+.+++.+ +.. ...|++. |..++|+++++++ | +++++|++|+|+++++..+
T Consensus 55 ~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~al~~~ 134 (447)
T 3b46_A 55 QGRELINLGQGFFSYSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEGILSC 134 (447)
T ss_dssp TTSCCEECCCCSCSSCCCHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHHTTTTTSCCCGGGEEEESHHHHHHHHH
T ss_pred cCCCeEEccCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHH
Confidence 345789999999999999999999876 332 2568554 7899999999997 3 4668999999999999999
Q ss_pred HHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC------------CCCCCHHHHHHHhhcCCceEEEEcCCCCC
Q 014492 163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS------------DFSLNVELIADAVEREKPKCIFLTSPNNP 230 (423)
Q Consensus 163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~------------~~~~d~~~l~~~i~~~~~~~i~l~~p~NP 230 (423)
+++++++||+|+++.|+|..+...++..|++++.+|.+. ++.+|+++|++.+. .++++|++++||||
T Consensus 135 ~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~l~~p~np 213 (447)
T 3b46_A 135 LMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAIT-SKTKAVIINTPHNP 213 (447)
T ss_dssp HHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCC-TTEEEEEEESSCTT
T ss_pred HHHHcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhc-cCCeEEEEeCCCCC
Confidence 999999999999999999999999999999999999543 46899999999997 68999999999999
Q ss_pred cCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc--hhhhh--ccCCcEEEEccChhhhcccCcccccccc-CHHH
Q 014492 231 DGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES--RMEWV--KKHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSI 301 (423)
Q Consensus 231 tG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~--~~~~~--~~~~~~i~i~S~SK~~g~~G~R~G~i~~-~~~~ 301 (423)
||.+++.+++++|++. |++||+||+|.++.+++. ....+ +..+++++++|+||.||++|+|+||+++ ++++
T Consensus 214 tG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~~~~~l 293 (447)
T 3b46_A 214 IGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSLNAEL 293 (447)
T ss_dssp TCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEECSCHHH
T ss_pred CCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEEecCchhcCCcchhhEEEEeCCHHH
Confidence 9999998888877764 999999999999876542 22222 2357899999999999999999999999 9999
Q ss_pred HHHHHHhc--CCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCC---
Q 014492 302 IEYLWRAK--QPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSG--- 373 (423)
Q Consensus 302 ~~~l~~~~--~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~--- 373 (423)
++.+.... ..++.+++.|.++.++|+. .+++++.+++++++++++.+.|+++++....|.+++|+|++++..
T Consensus 294 ~~~l~~~~~~~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~p 373 (447)
T 3b46_A 294 LSYAAKAHTRICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDELGLPYTAPEGTYFVLVDFSKVKIP 373 (447)
T ss_dssp HHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHTCCEECCSBSSEEEEECTTCCCC
T ss_pred HHHHHHHHhhccCCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeeEEEEEecccccCc
Confidence 99887654 3578899999999989976 467889999999999999999998754334577899999999742
Q ss_pred ------------CCHHHHHHHHH-hCCcEEEeCCCCC-------CCCeEEEEecChhhHHHHHHHHhhh
Q 014492 374 ------------MDAKKLKDDLA-KMGVMIRHYNNKE-------LKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 374 ------------~~~~~l~~~L~-~~gI~v~~~~~~~-------~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.+..++++.|. ++||.+.+++.+. .++++||+++.. .++|.+++++|
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iRls~~~~--~e~l~~~~~~l 440 (447)
T 3b46_A 374 EDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFAVCKD--DAYLENAVERL 440 (447)
T ss_dssp TTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEEEECCSC--HHHHHHHHHHG
T ss_pred cccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEEEEEeCC--HHHHHHHHHHH
Confidence 35668888887 6899999876532 268999999863 36788888776
No 21
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=9.8e-43 Score=341.62 Aligned_cols=323 Identities=23% Similarity=0.324 Sum_probs=269.4
Q ss_pred CCCCeeEcCCCCCCCCCCHHHHHHHhc-CC-CCCCCCC-cchHHHHHHHHHHh----CC--CCCcEEEeCCHHHHHHHHH
Q 014492 93 KPEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPD-PESRRLRAALAKDS----GL--ESDHILVGCGADELIDLIM 163 (423)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~Y~~-~g~~~lr~~ia~~~----g~--~~~~i~~t~G~~~al~~~~ 163 (423)
.++++|+|+.|++++++++.+.+++.+ +. ....|++ .+..++|+++++++ |+ ++++|++|+|+++++..++
T Consensus 39 ~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~v~~~~g~t~al~~~~ 118 (389)
T 1o4s_A 39 KGEDVINLTAGEPDFPTPEPVVEEAVRFLQKGEVKYTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAF 118 (389)
T ss_dssp TTCCCEECCCSSCSSCCCHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHHHHTCCCCGGGEEEESHHHHHHHHHH
T ss_pred cCCCEEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEecCHHHHHHHHH
Confidence 456789999999998888999998876 22 2346865 47899999999997 65 6789999999999999999
Q ss_pred HHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC--CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHH
Q 014492 164 RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL 241 (423)
Q Consensus 164 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~ 241 (423)
++++++||+|+++.|+|..+...++..|++++.+|.+. ++.+|++++++.++ .++++|++++|+||||.+++.++++
T Consensus 119 ~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~p~nptG~~~~~~~l~ 197 (389)
T 1o4s_A 119 MALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLV-GKTKAVLINSPNNPTGVVYRREFLE 197 (389)
T ss_dssp HHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCC-TTEEEEEEESSCTTTCCCCCHHHHH
T ss_pred HHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcc-cCceEEEEcCCCCCCCCCCCHHHHH
Confidence 99999999999999999999999999999999999753 57899999999997 5899999999999999999977666
Q ss_pred HHHcC----CCEEEEccCCccccCCCc--hhhhhcc-CCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC--CC
Q 014492 242 KILEM----PILVVLDEAYTEFSGLES--RMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PY 312 (423)
Q Consensus 242 ~i~~~----~~~li~Deay~~~~~~~~--~~~~~~~-~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~--~~ 312 (423)
+|++. |+++|+||+|.++.+++. ....+.. .+++++++|+||.+|++|+|+||+++++++++.+..... .+
T Consensus 198 ~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~l~~~~~~~~~l~~~~~~~~~ 277 (389)
T 1o4s_A 198 GLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEKVATAVSKIQSHTTS 277 (389)
T ss_dssp HHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHcCCEEEEEccccccccCCCCCCHhhcCCCCCcEEEEeechhhcCCcccceEEEEeCHHHHHHHHHHhhhccc
Confidence 66553 999999999998876432 2222322 578999999999999999999999999999988876654 46
Q ss_pred CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHH-hCCcEEE
Q 014492 313 NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-KMGVMIR 391 (423)
Q Consensus 313 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~-~~gI~v~ 391 (423)
+.+.+++.++.++|++. +++.+++++++++++.+.|++++.....+.+++|+|++++ .+..++.+.|. ++||.++
T Consensus 278 ~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~--~~~~~l~~~l~~~~gi~v~ 353 (389)
T 1o4s_A 278 CINTVAQYAALKALEVD--NSYMVQTFKERKNFVVERLKKMGVKFVEPEGAFYLFFKVR--GDDVKFCERLLEEKKVALV 353 (389)
T ss_dssp SCCHHHHHHHHHHTTCC--CHHHHHHHHHHHHHHHHHHHHTTCCCCCCSBSSEEEEECS--SCHHHHHHHHHHHHCEECE
T ss_pred CCCHHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHHHhcCCeeecCCcceEEEEeCC--CCHHHHHHHHHHHCCEEEe
Confidence 78899999999999875 7788899999999999999887432234566788999986 57889999997 8999999
Q ss_pred eCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 392 HYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 392 ~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
++..+..++++||+++.. .+++.+++++|
T Consensus 354 ~g~~f~~~~~~Ris~~~~--~~~l~~~l~~l 382 (389)
T 1o4s_A 354 PGSAFLKPGFVRLSFATS--IERLTEALDRI 382 (389)
T ss_dssp EGGGGTCTTEEEEECCSC--HHHHHHHHHHH
T ss_pred CchhcCCCCeEEEEEeCC--HHHHHHHHHHH
Confidence 987655567999999863 36777777765
No 22
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=100.00 E-value=7.4e-43 Score=342.07 Aligned_cols=349 Identities=21% Similarity=0.313 Sum_probs=280.1
Q ss_pred HhcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcC-C-CCCCCCCc-chHHHHHHHHHHh----
Q 014492 70 HLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-K-FPYIYPDP-ESRRLRAALAKDS---- 142 (423)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Y~~~-g~~~lr~~ia~~~---- 142 (423)
++..+.++ +...+.....+....++++++|+.|++++++++.+.+++.+. . ....|++. +..++|+++++++
T Consensus 6 ~~~~~~~~-~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~ 84 (388)
T 1j32_A 6 RVESVSPS-MTLIIDAKAKAMKAEGIDVCSFSAGEPDFNTPKHIVEAAKAALEQGKTRYGPAAGEPRLREAIAQKLQRDN 84 (388)
T ss_dssp HHHTSCCC-SSTTTHHHHHHHHTTTCCCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHH
T ss_pred HhHhCCcc-HHHHHHHHHHHHHhcCCCEEECCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhc
Confidence 34444444 233344444444445678899999999998899999888762 2 23568654 7899999999987
Q ss_pred C--CCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC--CCCCCHHHHHHHhhcCC
Q 014492 143 G--LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREK 218 (423)
Q Consensus 143 g--~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~ 218 (423)
| +++++|++|+|+++++..++++++++||+|+++.|+|+.+...++..|++++.+|.+. ++.+|++++++.++ .+
T Consensus 85 g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~-~~ 163 (388)
T 1j32_A 85 GLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAIT-PK 163 (388)
T ss_dssp CCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCC-TT
T ss_pred CCCCChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCEEEEecCCcccCCCCCHHHHHHhcC-cC
Confidence 4 4678999999999999999999999999999999999999999999999999999753 67899999999997 58
Q ss_pred ceEEEEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhc--cCCcEEEEccChhhhcccC
Q 014492 219 PKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVK--KHDNLIVLRTFSKRAGLAG 289 (423)
Q Consensus 219 ~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~--~~~~~i~i~S~SK~~g~~G 289 (423)
+++|++++|+||||.+++.+++++|++. |+++|+||+|.++.+++. ....+. ..++++++.|+||.+|++|
T Consensus 164 ~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G 243 (388)
T 1j32_A 164 TKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTG 243 (388)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTT
T ss_pred ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhccCCcc
Confidence 9999999999999999997777776654 999999999999876432 122221 1457899999999999999
Q ss_pred ccccccccCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceE
Q 014492 290 LRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNF 365 (423)
Q Consensus 290 ~R~G~i~~~~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~ 365 (423)
+|+||+++++++++.+..... .++.+.+++.++..+|+. .+++++.+++++++++++.+.|++++++.+ .+.+++|
T Consensus 244 ~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~ 323 (388)
T 1j32_A 244 WRVGFLAGPVPLVKAATKIQGHSTSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAMPGLECPKPDGAFY 323 (388)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHTCTTCBCCCCCBTTE
T ss_pred cceEEEEeCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCCeeEE
Confidence 999999999999988876544 367889999988888874 578899999999999999999998855554 4556778
Q ss_pred EEEEeCC-CCCHHHHHHHHHh-CCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 366 ILCEVTS-GMDAKKLKDDLAK-MGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 366 ~~~~~~~-~~~~~~l~~~L~~-~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
+|++++. +.+..++.+.|.+ +||.++++..+..++++||+++.. .+++.+++++|
T Consensus 324 ~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~--~~~i~~~~~~l 380 (388)
T 1j32_A 324 MFPSIAKTGRSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYATD--LDTIKRGMERL 380 (388)
T ss_dssp ECCBCGGGTCCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECCSC--HHHHHHHHHHH
T ss_pred EEEecCCCCCCHHHHHHHHHHhCCEEEeChhhhCCCCcEEEEecCC--HHHHHHHHHHH
Confidence 8888864 5678899999985 799999987655578999999853 35577776655
No 23
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=100.00 E-value=1.7e-42 Score=339.44 Aligned_cols=325 Identities=19% Similarity=0.322 Sum_probs=271.0
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhcC-CC-CCCCCCc-chHHHHHHHHHHh----C--CCCC-cEEEeCCHHHHHHHHHH
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQL-KF-PYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCGADELIDLIMR 164 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~-~~~Y~~~-g~~~lr~~ia~~~----g--~~~~-~i~~t~G~~~al~~~~~ 164 (423)
.++|+|+.+.+++++++.+.+++.+. .. ...|+.. +..++|+++++++ | ++++ +|++|+|+++++..+++
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~ 109 (386)
T 1u08_A 30 HQAINLSQGFPDFDGPRYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAIT 109 (386)
T ss_dssp TTCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHHHHHHH
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHHHHHHH
Confidence 35799999999988899999998763 22 3568654 7899999999995 6 5678 99999999999999999
Q ss_pred HhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC-CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHH
Q 014492 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243 (423)
Q Consensus 165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i 243 (423)
+++++||+|+++.|+|+.+...++..|++++.+|.+. ++.+|++++++.+. .++++|++++|+||||.+++.+++++|
T Consensus 110 ~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~~~~l~~i 188 (386)
T 1u08_A 110 ALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALLS-ERTRLVILNTPHNPSATVWQQADFAAL 188 (386)
T ss_dssp HHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCTTTCCCCHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred HhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEeecCcccCcCCHHHHHHhhc-ccCEEEEEeCCCCCCCccCCHHHHHHH
Confidence 9999999999999999999999999999999999754 57899999999996 689999999999999999998776666
Q ss_pred Hc---C-CCEEEEccCCccccCCCc---hhhhhc-cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC--CCC
Q 014492 244 LE---M-PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYN 313 (423)
Q Consensus 244 ~~---~-~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~--~~~ 313 (423)
++ . |+++|+||+|.++.+.+. ....+. ..+++++++|+||.+|++|+|+||+++++++++.+..... .++
T Consensus 189 ~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~ 268 (386)
T 1u08_A 189 WQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAPISAEIRKVHQYLTFS 268 (386)
T ss_dssp HHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCHHHHHHHHHHHHHHTSS
T ss_pred HHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcccceEEEEcCHHHHHHHHHHHHhhccC
Confidence 54 4 999999999999876432 122222 3578999999999999999999999999999988876553 578
Q ss_pred CcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCCC--CCHHHHHHHHH-hCCc
Q 014492 314 VSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTSG--MDAKKLKDDLA-KMGV 388 (423)
Q Consensus 314 ~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~~--~~~~~l~~~L~-~~gI 388 (423)
.+.+.+.++..+|+. .+++++.+++++++++++.+.|++++ +.+ .+.+++|+|+++++. .+..++.+.|. ++||
T Consensus 269 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi 347 (386)
T 1u08_A 269 VNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNESR-LEILPCEGTYFLLVDYSAVSTLDDVEFCQWLTQEHGV 347 (386)
T ss_dssp CCHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHHHHHHTTSSS-CEECCCCBSSEEEEECTTTCCSCHHHHHHHHHHHSCE
T ss_pred CChHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHCC-CeecCCCceEEEEEecCCCCCCCHHHHHHHHHHhCCE
Confidence 889999999988876 67889999999999999999999885 444 456678999999854 57889999887 7899
Q ss_pred EEEeCCCC----CCCCeEEEEecChhhHHHHHHHHhhhC
Q 014492 389 MIRHYNNK----ELKGYVRVSVGKPEHTDALMECLMHLY 423 (423)
Q Consensus 389 ~v~~~~~~----~~~~~iRis~~~~~~~~~l~~al~~l~ 423 (423)
.++++..+ ..++++||+++.. .+++.+++++|+
T Consensus 348 ~v~~g~~f~~~~~~~~~iRis~~~~--~~~i~~~~~~l~ 384 (386)
T 1u08_A 348 AAIPLSVFCADPFPHKLIRLCFAKK--ESTLLAAAERLR 384 (386)
T ss_dssp ECEEGGGGCSSCCCSCEEEEECCSC--HHHHHHHHHHHT
T ss_pred EEeCchHhCCCCCCCCEEEEEEcCC--HHHHHHHHHHHh
Confidence 99987642 3568999999863 367888877763
No 24
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=100.00 E-value=1.8e-42 Score=339.43 Aligned_cols=325 Identities=23% Similarity=0.379 Sum_probs=270.7
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhcC-C-CCCCCCCc-chHHHHHHHHHHh----C--CCCCc-EEEeCCHHHHHHHHHH
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQL-K-FPYIYPDP-ESRRLRAALAKDS----G--LESDH-ILVGCGADELIDLIMR 164 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Y~~~-g~~~lr~~ia~~~----g--~~~~~-i~~t~G~~~al~~~~~ 164 (423)
.++|+|+.+++++++++.+.+++.+. . ....|++. +..++|+++++++ | +++++ |++|+|+++++..+++
T Consensus 26 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~ 105 (389)
T 1gd9_A 26 KDVISLGIGEPDFDTPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLS 105 (389)
T ss_dssp SSCEECCCCSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHT
T ss_pred cCeEecCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEEcCChHHHHHHHHH
Confidence 46899999999998899999888762 2 23568654 7899999999998 7 46788 9999999999999999
Q ss_pred HhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC--CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHH
Q 014492 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK 242 (423)
Q Consensus 165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~ 242 (423)
+++++||+|+++.|+|+.+...++..|++++.+|.+. ++.+|++++++.+. .++++|++++|+||||.+++.+++++
T Consensus 106 ~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~~~nptG~~~~~~~l~~ 184 (389)
T 1gd9_A 106 AFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYVT-DKTRALIINSPCNPTGAVLTKKDLEE 184 (389)
T ss_dssp TTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHH
T ss_pred HhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCCccCCCCCHHHHHHhcC-cCceEEEEECCCCCCCcCCCHHHHHH
Confidence 9999999999999999999999999999999999753 57789999999997 58999999999999999999777777
Q ss_pred HHcC----CCEEEEccCCccccCCCc---hhhhhc-cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC--C
Q 014492 243 ILEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--Y 312 (423)
Q Consensus 243 i~~~----~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~--~ 312 (423)
|++. |+++|+||+|.++.+.+. ....+. ..+++++++|+||.+|++|+|+||+++++++++.+...... +
T Consensus 185 l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~ 264 (389)
T 1gd9_A 185 IADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWIIERMVKFQMYNAT 264 (389)
T ss_dssp HHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcCCcccceEEEEECHHHHHHHHHHHhhhcc
Confidence 6653 999999999999876432 122222 24679999999999999999999999999999988876553 6
Q ss_pred CCcHHHHHHHHHHhCC-hH--HHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCC-CCCHHHHHHHHH-hCC
Q 014492 313 NVSVAAEVAACAALQN-PI--YLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS-GMDAKKLKDDLA-KMG 387 (423)
Q Consensus 313 ~~~~~~~~a~~~~l~~-~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~-~~~~~~l~~~L~-~~g 387 (423)
+.+.+.+.++.++|+. .+ ++++.+++++++++++.+.|++++.....+.+++|+|+++++ +.+..++.+.|. ++|
T Consensus 265 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 344 (389)
T 1gd9_A 265 CPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMGLPTVKPKGAFYIFPRIRDTGLTSKKFSELMLKEAR 344 (389)
T ss_dssp SCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBTTEECCBCGGGTCCHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHcCCeecCCCeeeEEEEeccCCCCCHHHHHHHHHHhCC
Confidence 7899999999999987 34 788999999999999999999875323345667889999874 568899999998 899
Q ss_pred cEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014492 388 VMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 388 I~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
|.++++..+. .++++||+++.. .+++.+++++|
T Consensus 345 i~v~~g~~~~~~~~~~iRi~~~~~--~~~i~~~l~~l 379 (389)
T 1gd9_A 345 VAVVPGSAFGKAGEGYVRISYATA--YEKLEEAMDRM 379 (389)
T ss_dssp EECEEGGGGCGGGTTBEEEECCSC--HHHHHHHHHHH
T ss_pred EEEeCchhhCCCCCCeEEEEecCC--HHHHHHHHHHH
Confidence 9999876532 368999999863 36677777665
No 25
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=100.00 E-value=7.9e-43 Score=346.57 Aligned_cols=327 Identities=19% Similarity=0.292 Sum_probs=273.2
Q ss_pred CCCCeeEcCCCCCC----CCCCHHHHHHHhcC-C--CCCCC-CCcchHHHHHHHHHHhC-----CCCCcEEEeCCHHHHH
Q 014492 93 KPEDIVKIDANENP----YGPPPEVREALGQL-K--FPYIY-PDPESRRLRAALAKDSG-----LESDHILVGCGADELI 159 (423)
Q Consensus 93 ~~~~~i~l~~~~~~----~~~~~~v~~al~~~-~--~~~~Y-~~~g~~~lr~~ia~~~g-----~~~~~i~~t~G~~~al 159 (423)
+++++|+|+.|.+. +++++.+.+++.+. . ....| +..+..++|++++++++ +++++|++|+|+++++
T Consensus 52 ~~~~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~v~~t~g~t~al 131 (427)
T 3dyd_A 52 PNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGFLSSREEIASYYHCPEAPLEAKDVILTSGCSQAI 131 (427)
T ss_dssp TTSCCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSSSCCCTTCCHHHHHHHHHHHCBTTBCCCGGGEEEESSHHHHH
T ss_pred CCCCEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCCCCCCCCCcHHHHHHHHHHHhhcCCCCChHHEEEecCcHHHH
Confidence 45678999999864 67889999998763 2 23567 55689999999999998 7889999999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCH
Q 014492 160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND 237 (423)
Q Consensus 160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~ 237 (423)
.+++..++++||+|+++.|+|..+...++..|++++.+|.+ .++.+|++++++.++ .++++|++++|+||||.+++.
T Consensus 132 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~i~~p~nptG~~~~~ 210 (427)
T 3dyd_A 132 DLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEIDLKQLEYLID-EKTACLIVNNPSNPCGSVFSK 210 (427)
T ss_dssp HHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHSSCC-TTEEEEEEESSCTTTCCCCCH
T ss_pred HHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhc-cCCCEEEEECCCCCCCCCCCH
Confidence 99999999999999999999999999999999999999853 467899999999997 579999999999999999996
Q ss_pred HHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhccCCcEEEEccChhhhcccCccccccccC-------HHHHH
Q 014492 238 EDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-------LSIIE 303 (423)
Q Consensus 238 ~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~-------~~~~~ 303 (423)
+++++|++. |+++|+||+|.+|.+++. ....+....++++++|+||.|+++|+|+||++++ +++++
T Consensus 211 ~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~i~~ 290 (427)
T 3dyd_A 211 RHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRD 290 (427)
T ss_dssp HHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEEEEESTTTSSCGGGCCEEEEEECSTTSSHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEEEeeccccCCCcCcceEEEEecCcchhhHHHHHH
Confidence 666666553 999999999999876442 2333444567899999999999999999999986 46777
Q ss_pred HHHHhc-CCCCCcHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCC-----CC
Q 014492 304 YLWRAK-QPYNVSVAAEVAACAALQ--NPIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS-----GM 374 (423)
Q Consensus 304 ~l~~~~-~~~~~~~~~~~a~~~~l~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~-----~~ 374 (423)
.+.... ..++.+.++|.++.++|+ ..+++++++++++++++++.+.|++++++.+ .|++++|+|+.++. +.
T Consensus 291 ~l~~~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~p~~g~~~~~~l~~~~~~~~~ 370 (427)
T 3dyd_A 291 GLVKLSQRILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGLRPVRPSGAMYLMVGIEMEHFPEFE 370 (427)
T ss_dssp HHHHHHHHHCCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCSBTTEEEEEECGGGCTTCS
T ss_pred HHHHHHhccCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEEEEEecCHhhcCCCC
Confidence 776553 247899999999999998 4678899999999999999999999866654 68889999998862 35
Q ss_pred CHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 375 DAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 375 ~~~~l~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
+..++++.|. ++||.+.++..+..++++||+++..+ +++.+++++|
T Consensus 371 ~~~~~~~~l~~~~gV~v~~g~~~~~~~~iRis~~~~~--e~i~~~l~~l 417 (427)
T 3dyd_A 371 NDVEFTERLVAEQSVHCLPATCFEYPNFIRVVITVPE--VMMLEACSRI 417 (427)
T ss_dssp SHHHHHHHHHHHHCEECEEGGGGTCTTEEEEESCSCH--HHHHHHHHHH
T ss_pred CHHHHHHHHHHHCCEEEECCcccCCCCeEEEEECCCH--HHHHHHHHHH
Confidence 7888998886 89999999877667899999998543 5676666654
No 26
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=100.00 E-value=5.9e-43 Score=349.43 Aligned_cols=325 Identities=23% Similarity=0.375 Sum_probs=267.6
Q ss_pred CCeeEcCCCCCCCC--CCHHHHHHHhcC-CC----CCCCCC-cchHHHHHHHHHHh----CC-CCCcEEEeCCHHHHHHH
Q 014492 95 EDIVKIDANENPYG--PPPEVREALGQL-KF----PYIYPD-PESRRLRAALAKDS----GL-ESDHILVGCGADELIDL 161 (423)
Q Consensus 95 ~~~i~l~~~~~~~~--~~~~v~~al~~~-~~----~~~Y~~-~g~~~lr~~ia~~~----g~-~~~~i~~t~G~~~al~~ 161 (423)
.++|+|+.|.++.. +++++.+++.+. .. ...|+. .|..+||+++++++ |+ ++++|++|+|+++++..
T Consensus 76 ~~~i~l~~g~p~~~~~p~~~v~~a~~~~l~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~v~~t~G~~~al~~ 155 (448)
T 3aow_A 76 SDIISLAGGLPNPKTFPKEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLGKRYGISQDNDIMITSGSQQALDL 155 (448)
T ss_dssp SSSEECCCCCCCGGGSCHHHHHHHHHHHHHHSHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCTTSEEEEESSHHHHHHH
T ss_pred CCcEeCCCCCCCchhCCHHHHHHHHHHHHHhhhHHHhCCCCCCCcHHHHHHHHHHHHHhcCcCChhhEEEeCcHHHHHHH
Confidence 46899999876543 567788777652 11 146754 47899999999999 88 78899999999999999
Q ss_pred HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhh----c-CCceEEE-EcCCCCCcCcCC
Q 014492 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE----R-EKPKCIF-LTSPNNPDGSII 235 (423)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~----~-~~~~~i~-l~~p~NPtG~~~ 235 (423)
++++++++||.|+++.|+|..+...++..|++++.+|.+++ ++|+++|++.++ + .++++|+ +++|+||||.++
T Consensus 156 ~~~~l~~~Gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~ 234 (448)
T 3aow_A 156 IGRVFLNPGDIVVVEAPTYLAALQAFNFYEPQYIQIPLDDE-GMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTM 234 (448)
T ss_dssp HHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT-EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCC
T ss_pred HHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEeccCCC-CCCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCC
Confidence 99999999999999999999999999999999999997654 599999999986 3 3789985 579999999999
Q ss_pred CHHHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHh
Q 014492 236 NDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA 308 (423)
Q Consensus 236 ~~~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~ 308 (423)
+.+++++|++. |++||+||+|.++.+++. ....++..+++++++||||.++ +|+|+||+++++++++.+...
T Consensus 235 ~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~~~~~vi~~~S~SK~~~-~GlriG~v~~~~~l~~~l~~~ 313 (448)
T 3aow_A 235 NEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILA-PGFRIGWMVGDPGIIRKMEIA 313 (448)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGCTTSCEEEEEESTTTTC-GGGCCEEEEECHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhcCCCCCEEEEccchhhcc-ccccEEEEEeCHHHHHHHHHH
Confidence 99877777664 999999999999876432 2333444578999999999999 999999999999999988776
Q ss_pred cCC--CCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHcc-CC-CCee-cCCCceEEEEEeCCCCCHHHHH
Q 014492 309 KQP--YNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKD-VP-FLNP-YPSYSNFILCEVTSGMDAKKLK 380 (423)
Q Consensus 309 ~~~--~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~-~~-~~~~-~p~~~~~~~~~~~~~~~~~~l~ 380 (423)
... ++.++++|.++.++|++ .+++++.+++++++++++.+.|++ ++ ++.. .|.+|+|+|++++++.+..++.
T Consensus 314 ~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~p~~g~~~~v~~~~~~~~~~l~ 393 (448)
T 3aow_A 314 KQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWVTLPDGIDSKKML 393 (448)
T ss_dssp HHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEECCCSBSSEEEEECSTTCCHHHHH
T ss_pred HHHhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEeCCCccEEEEEEcCCCCCHHHHH
Confidence 543 67799999999999987 367888999999999999999987 45 3554 5778999999998778899999
Q ss_pred HHHHhCCcEEEeCCCC----CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 381 DDLAKMGVMIRHYNNK----ELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 381 ~~L~~~gI~v~~~~~~----~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
+.|.++||.+.++..+ ..++++||+++..+ .+++.+++++|
T Consensus 394 ~~l~~~gV~v~pg~~f~~~~~~~~~iRls~~~~~-~e~i~~~~~~L 438 (448)
T 3aow_A 394 ERAIKKGVAYVPGEAFYAHRDVKNTMRLNFTYVD-EDKIMEGIKRL 438 (448)
T ss_dssp HHHHHTTEECEEGGGGSTTCCCCSEEEEECSSSC-THHHHHHHHHH
T ss_pred HHHHHCCcEEEcchhhcCCCCCCCEEEEEeCCCC-HHHHHHHHHHH
Confidence 9999889999987653 34689999998632 25566666554
No 27
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=100.00 E-value=8.6e-43 Score=339.52 Aligned_cols=318 Identities=20% Similarity=0.283 Sum_probs=267.8
Q ss_pred CCCCeeEcCCCCCCCCCCHHHHHHHhcC-C-CCCCCCC-cchHHHHHHHHHHhC------CCCCcEEEeCCHHHHHHHHH
Q 014492 93 KPEDIVKIDANENPYGPPPEVREALGQL-K-FPYIYPD-PESRRLRAALAKDSG------LESDHILVGCGADELIDLIM 163 (423)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Y~~-~g~~~lr~~ia~~~g------~~~~~i~~t~G~~~al~~~~ 163 (423)
.++++|+|+.+++++++++.+.+++.+. . ....|++ .+..++|++++++++ +++++|++|+|+++++..++
T Consensus 27 ~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~ 106 (370)
T 2z61_A 27 EGKKVIHLEIGEPDFNTPKPIVDEGIKSLKEGKTHYTDSRGILELREKISELYKDKYKADIIPDNIIITGGSSLGLFFAL 106 (370)
T ss_dssp TTCCCEECCCCSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHSSCCCCGGGEEEESSHHHHHHHHH
T ss_pred cCCCEEEccCCCCCCCCCHHHHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEECCChHHHHHHHH
Confidence 4567899999999998899999888762 2 2356865 478999999999974 67789999999999999999
Q ss_pred HHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHH
Q 014492 164 RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243 (423)
Q Consensus 164 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i 243 (423)
++++++||+|+++.|+|+.+...++..|++++.+| +|++++++.++ .++++|++++|+||||.+++.+ +.++
T Consensus 107 ~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~------~d~~~l~~~l~-~~~~~v~~~~p~nptG~~~~~~-l~~~ 178 (370)
T 2z61_A 107 SSIIDDGDEVLIQNPCYPCYKNFIRFLGAKPVFCD------FTVESLEEALS-DKTKAIIINSPSNPLGEVIDRE-IYEF 178 (370)
T ss_dssp HHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEEC------SSHHHHHHHCC-SSEEEEEEESSCTTTCCCCCHH-HHHH
T ss_pred HHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEeC------CCHHHHHHhcc-cCceEEEEcCCCCCcCcccCHH-HHHH
Confidence 99999999999999999999999999999999998 78999999997 5899999999999999999999 9999
Q ss_pred HcC-CCEEEEccCCccccCCCch--hhhh-ccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC--CCCCcHH
Q 014492 244 LEM-PILVVLDEAYTEFSGLESR--MEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVA 317 (423)
Q Consensus 244 ~~~-~~~li~Deay~~~~~~~~~--~~~~-~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~--~~~~~~~ 317 (423)
|+. |+++|+||+|.++.+++.. ...+ +..+++++++|+||.+|++|+|+||+++++++++.+..... .++.+++
T Consensus 179 ~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (370)
T 2z61_A 179 AYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVISNDEIIEAILKLQQNLFISAPTI 258 (370)
T ss_dssp HHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHHHTSSSCHH
T ss_pred HHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcEEEEecChhccCCccceEEEEEECHHHHHHHHHHHhhcccCCCHH
Confidence 987 9999999999988764322 2222 23578999999999999999999999999999988876554 3578999
Q ss_pred HHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHH-hCCcEEEeCC
Q 014492 318 AEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-KMGVMIRHYN 394 (423)
Q Consensus 318 ~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~-~~gI~v~~~~ 394 (423)
++.++.++|+. .+++++.+++++++++++.+.|++++.....+.+++|+|+++++ +..++.+.|. ++||.++++.
T Consensus 259 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~gi~v~~g~ 336 (370)
T 2z61_A 259 SQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDFGWEVNNPIGAYYVFPNIGE--DGREFAYKLLKEKFVALTPGI 336 (370)
T ss_dssp HHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBCCCCCBTTEECCBCSS--CHHHHHHHHHHHHCEECEEGG
T ss_pred HHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHcCCeecCCCcceEEEEecCC--CHHHHHHHHHHhCCEEEeCch
Confidence 99999999985 56788899999999999999998874322345667889999874 7889999997 7899999876
Q ss_pred CCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014492 395 NKE--LKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 395 ~~~--~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.+. .++++||+++.. .+++.+++++|
T Consensus 337 ~f~~~~~~~~Ri~~~~~--~~~i~~~~~~l 364 (370)
T 2z61_A 337 GFGSKGKNYIRISYANS--YENIKEGLERI 364 (370)
T ss_dssp GGCGGGSSBEEEECCSC--HHHHHHHHHHH
T ss_pred hhCCCCCCEEEEEEeCC--HHHHHHHHHHH
Confidence 543 368999999953 36677777765
No 28
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=100.00 E-value=1.2e-42 Score=341.78 Aligned_cols=320 Identities=20% Similarity=0.317 Sum_probs=261.6
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhcC-CC-----CCCC-CCcchHHHHHHHHHHh----C--CCCCcEEEeCCHHHHHHH
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQL-KF-----PYIY-PDPESRRLRAALAKDS----G--LESDHILVGCGADELIDL 161 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~-----~~~Y-~~~g~~~lr~~ia~~~----g--~~~~~i~~t~G~~~al~~ 161 (423)
+++|+|+.|.+++++++.+.+++.+. .. ...| +..+..++|+++++++ | +++++|++|+|+++++..
T Consensus 35 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~ 114 (398)
T 3ele_A 35 ENVYDFSIGNPSIPAPQIVNDTIKELVTDYDSVALHGYTSAQGDVETRAAIAEFLNNTHGTHFNADNLYMTMGAAASLSI 114 (398)
T ss_dssp GGCEECCSCCCCSCCCHHHHHHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHH
T ss_pred CCeEEeecCCCCCCCCHHHHHHHHHHHhcCCccccCCcCCCCCcHHHHHHHHHHHHHHhCCCCChHHEEEccCHHHHHHH
Confidence 56899999988888999999988763 21 2567 4567899999999986 3 678999999999999999
Q ss_pred HHHHhcCCC-CeEEEcCCCchhhHHHHHHCCCeEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHH
Q 014492 162 IMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239 (423)
Q Consensus 162 ~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~ 239 (423)
+++.++++| |+|+++.|+|..+...++..|++++.+|.+ +++.+|++++++.+. .++++|++++||||||.+++.++
T Consensus 115 ~~~~l~~~g~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~p~nptG~~~~~~~ 193 (398)
T 3ele_A 115 CFRALTSDAYDEFITIAPYFPEYKVFVNAAGARLVEVPADTEHFQIDFDALEERIN-AHTRGVIINSPNNPSGTVYSEET 193 (398)
T ss_dssp HHHHHCCSTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCTTTSSCCHHHHHHTCC-TTEEEEEECSSCTTTCCCCCHHH
T ss_pred HHHHHcCCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhC-cCCCEEEEcCCCCCCCCCCCHHH
Confidence 999999999 999999999999999999999999999975 367899999999997 68999999999999999999888
Q ss_pred HHHHHc----------CCCEEEEccCCccccCCCchh-hhhccCCcEEEEccChhhhcccCccccccccCHHH------H
Q 014492 240 LLKILE----------MPILVVLDEAYTEFSGLESRM-EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI------I 302 (423)
Q Consensus 240 l~~i~~----------~~~~li~Deay~~~~~~~~~~-~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~------~ 302 (423)
+++|++ .|+++|+||+|.+|.+++... ......+++++++|+||.+|++|+|+||+++++++ .
T Consensus 194 l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 273 (398)
T 3ele_A 194 IKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPGERIGYVLVPDEVYDKAELY 273 (398)
T ss_dssp HHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGGGTCSSEEEEEESTTTSSCTTTCCEEEECCTTSTTHHHHH
T ss_pred HHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChHhhcCCeEEEEehhhcCCCccceeEEEEEcchhhhHHHHH
Confidence 876543 489999999999988654222 22344688999999999999999999999998763 3
Q ss_pred HHHHHh---cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHH
Q 014492 303 EYLWRA---KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKL 379 (423)
Q Consensus 303 ~~l~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l 379 (423)
+.+... ...++.+.+++.++..++++.+ .+++++++++++.+.|++++.....+.+++|+|++++. .+..++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~----~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~-~~~~~~ 348 (398)
T 3ele_A 274 AAVCGAGRALGYVCAPSLFQKMIVKCQGATG----DINAYKENRDLLYEGLTRIGYHCFKPDGAFYMFVKALE-DDSNAF 348 (398)
T ss_dssp HHHHHHHHHTTCCCSCHHHHHHHTTCTTCCC----CHHHHHHHHHHHHHHHHHHTCCEECCSBSSEEEEECSS-SCHHHH
T ss_pred HHHHHHhhhccccCCCHHHHHHHHHHhcCHH----HHHHHHHHHHHHHHHHHHcCCeecCCCeeEEEEEEcCC-CCHHHH
Confidence 333322 2346788899998888887643 35677888999999998875444556777889999984 478899
Q ss_pred HHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 380 KDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 380 ~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.+.|.++||.++++..+..++++||+++.. .+++.+++++|
T Consensus 349 ~~~l~~~gi~v~~g~~~~~~~~iRis~~~~--~e~i~~~l~~l 389 (398)
T 3ele_A 349 CEKAKEEDVLIVAADGFGCPGWVRISYCVD--REMIKHSMPAF 389 (398)
T ss_dssp HHHHHTTTEECEESGGGTCTTEEEEECCSC--HHHHHHHHHHH
T ss_pred HHHHHHCCEEEeCccccCCCCeEEEEecCC--HHHHHHHHHHH
Confidence 999999999999988766688999999853 35566665554
No 29
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=100.00 E-value=3.7e-42 Score=338.31 Aligned_cols=333 Identities=15% Similarity=0.227 Sum_probs=270.7
Q ss_pred HHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcC-C-CCCCCCCcchHHHHHHHHHHh----C--CCCCcEEEeCCHHHH
Q 014492 87 SIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-K-FPYIYPDPESRRLRAALAKDS----G--LESDHILVGCGADEL 158 (423)
Q Consensus 87 ~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Y~~~g~~~lr~~ia~~~----g--~~~~~i~~t~G~~~a 158 (423)
..++|..+.++++|+.+++++++++.+.+++.+. . ....|++. ..++|+++++++ | +++++|++|+|++++
T Consensus 23 g~~~g~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~-~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a 101 (399)
T 1c7n_A 23 YSQNPEVGNEVVPLSVADMEFKNPPELIEGLKKYLDETVLGYTGP-TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPA 101 (399)
T ss_dssp HHHCTTCCTTCCCCCSSSCSSCCCHHHHHHHHHHHHHCCCSSBCC-CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHH
T ss_pred hhhccccCCCceeeeecCCCCCCCHHHHHHHHHHHhcCCCCCCCC-cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHH
Confidence 3445543357899999999999999999988763 1 23568665 789999999985 6 678899999999999
Q ss_pred HHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC-C--CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCC
Q 014492 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-S--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSII 235 (423)
Q Consensus 159 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~ 235 (423)
+..++++++++||+|+++.|+|..+...++..|++++.+|.+ + ++.+|++++++.+++.++++|++++|+||||.++
T Consensus 102 ~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~ 181 (399)
T 1c7n_A 102 VFNAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVW 181 (399)
T ss_dssp HHHHHHHHCCTTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCC
T ss_pred HHHHHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEEcCCCCCCCcCc
Confidence 999999999999999999999999999999999999999964 2 2459999999999756899999999999999999
Q ss_pred CHHHHHHHHc---C-CCEEEEccCCccccCCCc---hhhhhcc--CCcEEEEccChhhhcccCccccccccC-HHHHHHH
Q 014492 236 NDEDLLKILE---M-PILVVLDEAYTEFSGLES---RMEWVKK--HDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYL 305 (423)
Q Consensus 236 ~~~~l~~i~~---~-~~~li~Deay~~~~~~~~---~~~~~~~--~~~~i~i~S~SK~~g~~G~R~G~i~~~-~~~~~~l 305 (423)
+.+++++|++ . |+++|+||+|.++.+++. ....+.. .++++++.|+||.+|++|+|+||++++ +++++.+
T Consensus 182 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l 261 (399)
T 1c7n_A 182 KKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDIRERF 261 (399)
T ss_dssp CHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccchheEEEEECCHHHHHHH
Confidence 9666666554 3 999999999999876432 2222222 478899999999999999999999996 6788888
Q ss_pred HHhcCCC---CCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHcc-CCCCeec-CCCceEEEEEeCC-CCCHHH
Q 014492 306 WRAKQPY---NVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKD-VPFLNPY-PSYSNFILCEVTS-GMDAKK 378 (423)
Q Consensus 306 ~~~~~~~---~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~-p~~~~~~~~~~~~-~~~~~~ 378 (423)
......+ +.+++++.++.++|+. .+++++.+++++++++++.+.|++ ++++.+. +.+++++|+++++ +.+..+
T Consensus 262 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (399)
T 1c7n_A 262 TKSRDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAPLIEGTYLQWIDFRALKMDHKA 341 (399)
T ss_dssp HHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCCCCSBSSEEEEECGGGCCCHHH
T ss_pred HHHHhhcccCCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEecCCceEEEEEEcccCCCCHHH
Confidence 7655443 6789999998888875 578899999999999999999988 7666644 4556677899975 367889
Q ss_pred HHHHHH-hCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014492 379 LKDDLA-KMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 379 l~~~L~-~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
+.+.|. ++||.++++..+. .++++||+++..+ +++.+++++|
T Consensus 342 ~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~--~~l~~~l~~l 386 (399)
T 1c7n_A 342 MEEFMIHKAQIFFDEGYIFGDGGIGFERINLAAPS--SVIQESLERL 386 (399)
T ss_dssp HHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCSCH--HHHHHHHHHH
T ss_pred HHHHHHHhCCEEEeCccccCCCCCCeEEEEeccCH--HHHHHHHHHH
Confidence 999997 7899999876532 4689999998763 5677777655
No 30
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=100.00 E-value=9e-43 Score=346.84 Aligned_cols=326 Identities=17% Similarity=0.133 Sum_probs=274.4
Q ss_pred CCCeeEcCCCCCCCCCCHHHHHHHhcC-C-CC-CCCCCc-chHHHHHHHHHHhC------CCCCcEEEeCCHHHHHHHHH
Q 014492 94 PEDIVKIDANENPYGPPPEVREALGQL-K-FP-YIYPDP-ESRRLRAALAKDSG------LESDHILVGCGADELIDLIM 163 (423)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~-~~Y~~~-g~~~lr~~ia~~~g------~~~~~i~~t~G~~~al~~~~ 163 (423)
+.++|+|+.|++++++++++.+++.+. . .. .+|++. +..++|++++++++ +++++|++|+|+++++.+++
T Consensus 43 g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~i~~t~g~t~al~~~~ 122 (437)
T 3g0t_A 43 GTKFCRMEMGVPGLPAPQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFAKLFVNIDIPARACVPTVGSMQGCFVSF 122 (437)
T ss_dssp TCCCEECCCCSCCSCCCHHHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHH
T ss_pred CCCEEeccCcCCCCCCCHHHHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHHHHhhCCCCCcccEEEeCCHHHHHHHHH
Confidence 467899999999999999999998763 2 22 568654 67899999999986 67889999999999999999
Q ss_pred HHhc--CCCC--eEEEcCCCchhhHHHHHHCCCeEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHH
Q 014492 164 RCVL--DPGD--KIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE 238 (423)
Q Consensus 164 ~~l~--~~gd--~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~ 238 (423)
++++ ++|| +|+++.|+|..+...++..|++++.+|.+ +++.+|++++++++.+.++++|++++||||||.+++.+
T Consensus 123 ~~l~~~~~gd~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~ 202 (437)
T 3g0t_A 123 LVANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFESFDLFEYRGEKLREKLESYLQTGQFCSIIYSNPNNPTWQCMTDE 202 (437)
T ss_dssp HHHTTSCTTCSCCEEEEESCCHHHHHHHHHHTCCCEEEEGGGGCTTHHHHHHHHHHTTTCCCEEEEESSCTTTCCCCCHH
T ss_pred HHHhcCCCCCccEEEEeCCCcHhHHHHHHHcCCEEEEEeecCCCCccCHHHHHHHHhcCCceEEEEeCCCCCCCCcCCHH
Confidence 9998 9999 99999999999999999999999999974 56678999999999547899999999999999999988
Q ss_pred HHHHHHcC----CCEEEEccCCccccCCCc-hh-------hhhcc-CCcEEEEccChhhhcccCccccccccCHHHHH-H
Q 014492 239 DLLKILEM----PILVVLDEAYTEFSGLES-RM-------EWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE-Y 304 (423)
Q Consensus 239 ~l~~i~~~----~~~li~Deay~~~~~~~~-~~-------~~~~~-~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~-~ 304 (423)
++++|++. |++||+||+|.++.+++. .. ..+.. .+++++++|+||.+|++|+|+||+++++++++ .
T Consensus 203 ~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~ 282 (437)
T 3g0t_A 203 ELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVLMISGKLYERE 282 (437)
T ss_dssp HHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGGCCEEEEECHHHHHCB
T ss_pred HHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCCccceeEEEEECHHHhhhh
Confidence 87777653 999999999998775421 22 23333 78899999999999999999999999999888 6
Q ss_pred -----------------HHHhcC--CCCCcHHHHHHHHHHhCChH-H---HHHHHHHHHHHHHHHHHHHccCCCCeec--
Q 014492 305 -----------------LWRAKQ--PYNVSVAAEVAACAALQNPI-Y---LEKVKEALIKERERLFKLLKDVPFLNPY-- 359 (423)
Q Consensus 305 -----------------l~~~~~--~~~~~~~~~~a~~~~l~~~~-~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~-- 359 (423)
+.+... .++.+.+++.++..+|++.+ | +++.+++++++++++.+.|++++ +.+.
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~ 361 (437)
T 3g0t_A 283 YPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARIMKKMFLDNG-FNIVYD 361 (437)
T ss_dssp CGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTTT-EEESSC
T ss_pred hhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHHHHHHHHHHHcC-CEEecc
Confidence 554433 47889999999999998754 4 88999999999999999999884 4544
Q ss_pred -----C-CCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCC--CCeEEEEec--ChhhHHHHHHHHhh
Q 014492 360 -----P-SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKEL--KGYVRVSVG--KPEHTDALMECLMH 421 (423)
Q Consensus 360 -----p-~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~--~~~iRis~~--~~~~~~~l~~al~~ 421 (423)
| .+++|+|++++ +.+..++.+.|.++||.++++..+.. ++++||+++ +.++++++.++|++
T Consensus 362 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~~L~~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~ 432 (437)
T 3g0t_A 362 KDGNEPLADGFYFTVGYK-GMDSSKLIEKFVRYGMCAITLKTTGSKRNEAMRICTSLLPESQFPDLEKRLQM 432 (437)
T ss_dssp EETTEECCSSSEEEEEET-TCCHHHHHHHHHHTTEECEESTTTTCCCTTCEEEECSSSCGGGHHHHHHHHHH
T ss_pred ccCCCCCceeEEEEEecC-CCCHHHHHHHHHHcCeEEeeccccCCCCCCEEEEEEecCCHHHHHHHHHHHHH
Confidence 6 88999999998 78899999999999999999876332 378999998 45666666666654
No 31
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=100.00 E-value=8.1e-43 Score=340.21 Aligned_cols=327 Identities=14% Similarity=0.131 Sum_probs=271.1
Q ss_pred HhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcC-CC-CCCCCCcchHHHHHHHHHHhC------CCCCcEEEeCCHHHHHH
Q 014492 89 QLGRKPEDIVKIDANENPYGPPPEVREALGQL-KF-PYIYPDPESRRLRAALAKDSG------LESDHILVGCGADELID 160 (423)
Q Consensus 89 ~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~-~~~Y~~~g~~~lr~~ia~~~g------~~~~~i~~t~G~~~al~ 160 (423)
.|+..++++|+|+.|+++++++|++.+++.+. .. ..+|++.+ .++|++++++++ +++++|++|+|+++++.
T Consensus 17 ~~d~~g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~-~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a~~ 95 (377)
T 3fdb_A 17 KWTRYGQGVLPLWVAESDFSTCPAVLQAITDAVQREAFGYQPDG-SLLSQATAEFYADRYGYQARPEWIFPIPDVVRGLY 95 (377)
T ss_dssp HHHSSCTTSEECCSSCCCSCCCHHHHHHHHHHHHTTCCSSCCSS-CCHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHH
T ss_pred eeeccCCCeeeecccCCCCCCCHHHHHHHHHHHHcCCCCCCCCC-HHHHHHHHHHHHHHhCCCCCHHHEEEeCChHHHHH
Confidence 34556788999999999999999999998763 22 36786655 889999999987 78899999999999999
Q ss_pred HHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHH
Q 014492 161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL 240 (423)
Q Consensus 161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l 240 (423)
.+++.++++||+|+++.|+|..+...++..|++++.+|.+.+ +|++++++.++ .+++++++++|+||||.+++.+++
T Consensus 96 ~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~d~~~l~~~l~-~~~~~v~i~~p~nptG~~~~~~~l 172 (377)
T 3fdb_A 96 IAIDHFTPAQSKVIVPTPAYPPFFHLLSATQREGIFIDATGG--INLHDVEKGFQ-AGARSILLCNPYNPLGMVFAPEWL 172 (377)
T ss_dssp HHHHHHSCTTCCEEEEESCCTHHHHHHHHHTCCEEEEECTTS--CCHHHHHHHHH-TTCCEEEEESSBTTTTBCCCHHHH
T ss_pred HHHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEEccCCCC--CCHHHHHHHhc-cCCCEEEEeCCCCCCCCCCCHHHH
Confidence 999999999999999999999999999999999999997665 99999999997 578999999999999999999998
Q ss_pred HHHHcC----CCEEEEccCCccccCCC--c--hhhhhccCCcEEEEccChhhhcccCcccccccc-CHHHHHHHHHhcC-
Q 014492 241 LKILEM----PILVVLDEAYTEFSGLE--S--RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQ- 310 (423)
Q Consensus 241 ~~i~~~----~~~li~Deay~~~~~~~--~--~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~-~~~~~~~l~~~~~- 310 (423)
++|++. |+++|+||+|.++.+.+ . ....+...+++++++|+||.+|++|+|+||++. ++++++.+.....
T Consensus 173 ~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~ 252 (377)
T 3fdb_A 173 NELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSNPSDAEHWQQLSPV 252 (377)
T ss_dssp HHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCSHHHHHHHHHSCHH
T ss_pred HHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEEEeCCHHHHHHHHHHHHh
Confidence 888653 99999999999987654 1 122222367889999999999999999998876 7888888876543
Q ss_pred -CCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHcc-CCCCeec-CCCceEEEEEeCCC-CCHHHHHHHHHh
Q 014492 311 -PYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKD-VPFLNPY-PSYSNFILCEVTSG-MDAKKLKDDLAK 385 (423)
Q Consensus 311 -~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~-p~~~~~~~~~~~~~-~~~~~l~~~L~~ 385 (423)
.++.+++++.++.+++++ .+++++.+++++++++++.+.|++ ++++.+. +.+++++|++++.. .+ .++.+.|.+
T Consensus 253 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~ 331 (377)
T 3fdb_A 253 IKDGASTLGLIAAEAAYRYGTDFLNQEVAYLKNNHDFLLHEIPKRIPGAKITPMQATYLMWIDFRDTTIE-GSPSEFFIE 331 (377)
T ss_dssp HHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCEECCCSBCSEEEEECTTSCCC-SCHHHHHHH
T ss_pred hcCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCeeEEEEEECcccCCC-HHHHHHHHH
Confidence 368899999998888876 578899999999999999999988 6666654 45566778999853 33 567777774
Q ss_pred -CCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014492 386 -MGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 386 -~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
+||.++++..+. .++++||+++.. .+++.+++++|
T Consensus 332 ~~gi~v~~g~~~~~~~~~~~Ris~~~~--~e~i~~~l~~l 369 (377)
T 3fdb_A 332 KAKVAMNDGAWFGEDGTGFCRLNFATS--REVLEEAIDRM 369 (377)
T ss_dssp HHCEECEEGGGGCGGGTTEEEEECCSC--HHHHHHHHHHH
T ss_pred hCCEEecCChhccCCCCCEEEEEeCCC--HHHHHHHHHHH
Confidence 599999987633 468999999863 35677776655
No 32
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=100.00 E-value=4.1e-42 Score=341.42 Aligned_cols=325 Identities=19% Similarity=0.259 Sum_probs=261.6
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhcCC-------------CCCCCCCc-chHHHHHHHHHHhC--------CCCCcEEEe
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQLK-------------FPYIYPDP-ESRRLRAALAKDSG--------LESDHILVG 152 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~~-------------~~~~Y~~~-g~~~lr~~ia~~~g--------~~~~~i~~t 152 (423)
..+|+|+.++|++++ +.+.+++.+.. ...+|+++ |..++|++++++++ +++++|++|
T Consensus 36 ~~~i~l~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~i~~~ 114 (428)
T 1iay_A 36 NGVIQMGLAENQLCL-DLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMA 114 (428)
T ss_dssp TSBEECSSCCCCSSH-HHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTSCEEE
T ss_pred CceeeeccccchhhH-HHHHHHHHhccccccccccccccHhhcCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChhhEEEc
Confidence 467999999999975 57778877421 12468766 68999999999986 778999999
Q ss_pred CCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHH-HHCCCeEEEecCC--CCCCCCHHHHHHHhhc-----CCceEEEE
Q 014492 153 CGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA-AVNGAAVVKVPRK--SDFSLNVELIADAVER-----EKPKCIFL 224 (423)
Q Consensus 153 ~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~-~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~-----~~~~~i~l 224 (423)
+|+++++..++++++++||+|+++.|+|..+...+ +..|++++.+|.+ ++|.+|++++++.+++ .++++|++
T Consensus 115 ~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l 194 (428)
T 1iay_A 115 GGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLIL 194 (428)
T ss_dssp EHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred cChHHHHHHHHHHhCCCCCeEEEccCCCcchHHHHHHhcCCEEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEE
Confidence 99999999999999999999999999999887744 4689999999975 4568899999998863 37899999
Q ss_pred cCCCCCcCcCCCHHHHHHHHc---C-CCEEEEccCCccccCCCc---hh-hhhcc-------CCcEEEEccChhhhcccC
Q 014492 225 TSPNNPDGSIINDEDLLKILE---M-PILVVLDEAYTEFSGLES---RM-EWVKK-------HDNLIVLRTFSKRAGLAG 289 (423)
Q Consensus 225 ~~p~NPtG~~~~~~~l~~i~~---~-~~~li~Deay~~~~~~~~---~~-~~~~~-------~~~~i~i~S~SK~~g~~G 289 (423)
++||||||.+++.+++++|++ . |++||+||+|.++.+.+. .. ..... .++++++.|+||.||++|
T Consensus 195 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~G 274 (428)
T 1iay_A 195 TNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPG 274 (428)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGG
T ss_pred cCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEEecchhhcCCCC
Confidence 999999999999666665554 4 999999999999765421 12 22222 588999999999999999
Q ss_pred cccccccc-CHHHHHHHHHhcCCCCCcHHHHHHHHHHhCChH----HHHHHHHHHHHHHHHHHHHHccCCCCeecC-CCc
Q 014492 290 LRVGYGAF-PLSIIEYLWRAKQPYNVSVAAEVAACAALQNPI----YLEKVKEALIKERERLFKLLKDVPFLNPYP-SYS 363 (423)
Q Consensus 290 ~R~G~i~~-~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~----~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p-~~~ 363 (423)
+|+||+++ ++++++.+.+...+++.+.++|.++..+|++.+ ++++.+++++++++++.+.|++++ +.+.+ .++
T Consensus 275 lr~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~g 353 (428)
T 1iay_A 275 FRVGIIYSFNDDVVNCARKMSSFGLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVVG-IKCLKNNAG 353 (428)
T ss_dssp GCEEEEEESCHHHHHHHHHHHTTSCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCBCCCSSS
T ss_pred ceEEEEEeCCHHHHHHHHHHHhcccCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcccCCCee
Confidence 99999998 688999888877778899999999999999865 577888999999999999999885 44444 488
Q ss_pred eEEEEEeCCCC------CHHHHHHHHHhC-CcEEEeCCCCC--CCCeEEEEec--ChhhHHHHHHHHhh
Q 014492 364 NFILCEVTSGM------DAKKLKDDLAKM-GVMIRHYNNKE--LKGYVRVSVG--KPEHTDALMECLMH 421 (423)
Q Consensus 364 ~~~~~~~~~~~------~~~~l~~~L~~~-gI~v~~~~~~~--~~~~iRis~~--~~~~~~~l~~al~~ 421 (423)
+|+|+++++.. +..++.+.|.++ ||.++++..+. .++++||+++ +.++++++.++|++
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~ 422 (428)
T 1iay_A 354 LFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRR 422 (428)
T ss_dssp SEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECSSSCHHHHHHHHHHHHH
T ss_pred EEEEEechhhcCCCchhHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHH
Confidence 99999997422 355788999865 99999876532 2579999998 45555555555443
No 33
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=100.00 E-value=1.2e-42 Score=342.89 Aligned_cols=333 Identities=24% Similarity=0.350 Sum_probs=272.6
Q ss_pred HHHHhCCCCCCeeEcCCCCC---CCCCCHHHHHHHhc-CCC-CCCCCCc-chHHHHHHHHHHh------CCCCCcEEEeC
Q 014492 86 LSIQLGRKPEDIVKIDANEN---PYGPPPEVREALGQ-LKF-PYIYPDP-ESRRLRAALAKDS------GLESDHILVGC 153 (423)
Q Consensus 86 ~~~~~~~~~~~~i~l~~~~~---~~~~~~~v~~al~~-~~~-~~~Y~~~-g~~~lr~~ia~~~------g~~~~~i~~t~ 153 (423)
.+.++...++++|+|+.+.+ ++++++.+.+++.+ +.. ...|++. +..++|+++++++ ++++++|++|+
T Consensus 29 ~~~~~~~~g~~~i~l~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~v~~t~ 108 (406)
T 1xi9_A 29 PARELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGHNYYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTA 108 (406)
T ss_dssp CHHHHHHTTCCCEECCCCCGGGTTCCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEES
T ss_pred HHHHHHHcCCCEEEecCCCCCcCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCCHHHEEEcC
Confidence 44455555677899999998 78888999888866 222 2468654 6789999999997 46778999999
Q ss_pred CHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCCc
Q 014492 154 GADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPD 231 (423)
Q Consensus 154 G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPt 231 (423)
|+++++..++++++++||+|+++.|+|..+...++..|++++.+|.+ +++.+|++++++.++ .++++|++++|+|||
T Consensus 109 g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~-~~~~~v~i~~p~npt 187 (406)
T 1xi9_A 109 AVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKIT-DRTKAIAVINPNNPT 187 (406)
T ss_dssp HHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCC-TTEEEEEEESSCTTT
T ss_pred ChHHHHHHHHHHhCCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCCCcCCcCCHHHHHHhhC-cCceEEEEECCCCCC
Confidence 99999999999999999999999999999999999999999999965 356789999999997 589999999999999
Q ss_pred CcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc--hhhhhccCCc-EEEEccChhhhcccCccccccc--cCH---
Q 014492 232 GSIINDEDLLKILEM----PILVVLDEAYTEFSGLES--RMEWVKKHDN-LIVLRTFSKRAGLAGLRVGYGA--FPL--- 299 (423)
Q Consensus 232 G~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~--~~~~~~~~~~-~i~i~S~SK~~g~~G~R~G~i~--~~~--- 299 (423)
|.+++.+++++|++. |+++|+||+|.++.+++. ....++ .++ +++++|+||.+|++|+|+||++ +++
T Consensus 188 G~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~ 266 (406)
T 1xi9_A 188 GALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLT-KDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKL 266 (406)
T ss_dssp CCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHC-SSSCEEEEEESTTTTCCGGGCCEEEEEECTTCTT
T ss_pred CCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHcC-CCceEEEEeccccccCCCccEEEEEEEecCchhH
Confidence 999997777666653 999999999999876322 233333 677 8999999999999999999999 898
Q ss_pred -HHHHHHHHhcCC-CCCcHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCC--C
Q 014492 300 -SIIEYLWRAKQP-YNVSVAAEVAACAALQ-NPIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS--G 373 (423)
Q Consensus 300 -~~~~~l~~~~~~-~~~~~~~~~a~~~~l~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~--~ 373 (423)
++++.+...... ++.+.+.+.++.++|+ ..+++++.+++++++++++.+.|++++++.+ .+.+++|+|++++. +
T Consensus 267 ~~l~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (406)
T 1xi9_A 267 SEVREAIDRLARIRLCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPKIEVGPW 346 (406)
T ss_dssp HHHHHHHHHHHHHTCCSCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBSSEECCEECSCSC
T ss_pred HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhCCCCeeecCCeeEEEEEecCccCC
Confidence 898888765433 7888899999999995 4567888999999999999999998865554 45567888888875 5
Q ss_pred CCHHHHHHHHH-hCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014492 374 MDAKKLKDDLA-KMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 374 ~~~~~l~~~L~-~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.+..++.+.|. ++||.++++..+. .++++||+++.. .+++.+++++|
T Consensus 347 ~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~~~--~~~i~~~~~~l 396 (406)
T 1xi9_A 347 KNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPP--IEILEEAMDRF 396 (406)
T ss_dssp SSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECCSC--HHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEecCC--HHHHHHHHHHH
Confidence 68899999997 8999999886543 268999999843 35677666654
No 34
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=100.00 E-value=1e-41 Score=333.98 Aligned_cols=330 Identities=20% Similarity=0.264 Sum_probs=270.2
Q ss_pred hCCCCCCeeEcCCCCCCCCCCHHHHHHHhcC-CC-CCCCCCcchHHHHHHHHHHh----C--CCCCcEEEeCCHHHHHHH
Q 014492 90 LGRKPEDIVKIDANENPYGPPPEVREALGQL-KF-PYIYPDPESRRLRAALAKDS----G--LESDHILVGCGADELIDL 161 (423)
Q Consensus 90 ~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~-~~~Y~~~g~~~lr~~ia~~~----g--~~~~~i~~t~G~~~al~~ 161 (423)
|...++++|+|+.++++++++|++.+++.+. .. .+.|+.. ..++++++++++ | +++++|++|+|+++++..
T Consensus 22 ~d~~g~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~-~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~~~ 100 (391)
T 3dzz_A 22 WGVLKEKELPMWIAEMDFKIAPEIMASMEEKLKVAAFGYESV-PAEYYKAVADWEEIEHRARPKEDWCVFASGVVPAISA 100 (391)
T ss_dssp TTTCCTTCEECCSSCCSSCCCHHHHHHHHHHHTTCCCCCBCC-CHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHHHH
T ss_pred eeccCCCceeccccCCCCCCCHHHHHHHHHHHhcCcCCCCCC-CHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHHHH
Confidence 3445668999999999999999999999873 22 3567544 466777776664 5 678899999999999999
Q ss_pred HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC---CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHH
Q 014492 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE 238 (423)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~---~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~ 238 (423)
++.+++++||+|+++.|+|..+...++..|++++.+|.+ .++.+|++++++++++.++++|++++|+||||.+++.+
T Consensus 101 ~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~~~~ 180 (391)
T 3dzz_A 101 MVRQFTSPGDQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAWSEE 180 (391)
T ss_dssp HHHHHSCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBCCCHH
T ss_pred HHHHhCCCCCeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCcccCHH
Confidence 999999999999999999999999999999999999973 23449999999999757899999999999999999998
Q ss_pred HHHHHHcC----CCEEEEccCCccccCCCc---hhhhhcc--CCcEEEEccChhhhcccCccccccccC-HHHHHHHHHh
Q 014492 239 DLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKK--HDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRA 308 (423)
Q Consensus 239 ~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~--~~~~i~i~S~SK~~g~~G~R~G~i~~~-~~~~~~l~~~ 308 (423)
++++|++. |+++|+||+|.++.+.+. ....+.. .++++++.|+||.+|++|+|+||++++ +++++.+...
T Consensus 181 ~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~ 260 (391)
T 3dzz_A 181 EVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNPDLRARAEES 260 (391)
T ss_dssp HHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECCHHHHHHHHHH
Confidence 88888664 999999999998876542 2222221 468899999999999999999999997 8888888765
Q ss_pred c---CCCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHcc-CCCCee-cCCCceEEEEEeCC-CCCHHHHHH
Q 014492 309 K---QPYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKD-VPFLNP-YPSYSNFILCEVTS-GMDAKKLKD 381 (423)
Q Consensus 309 ~---~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~-~p~~~~~~~~~~~~-~~~~~~l~~ 381 (423)
. ..++.+++++.++..+++. .+++++.+++++++++++.+.|++ ++++.+ .+.+++++|++++. +.+..++.+
T Consensus 261 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (391)
T 3dzz_A 261 FFLAGIGEPNLLAIPAAIAAYEEGHDWLRELKQVLRDNFAYAREFLAKEVPEVKVLDSNASYLAWVDISALGMNAEDFCK 340 (391)
T ss_dssp HHHHTCSSCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCCBSSEEEEECGGGCSCHHHHHH
T ss_pred HHhhccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEeccCceEEEEEehhhcCCCHHHHHH
Confidence 3 4578888898888888875 577899999999999999999998 776665 45566778899975 578999999
Q ss_pred HHH-hCCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 382 DLA-KMGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 382 ~L~-~~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.|. ++||.++++..+ ..++++||+++..+ +++.+++++|
T Consensus 341 ~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~--~~i~~~l~~l 382 (391)
T 3dzz_A 341 YLREKTGLIISAGNGYRGNGHEFVRINLACPK--ELVIDGMQRL 382 (391)
T ss_dssp HHHHHHCEECEESGGGCTTGGGEEEEECCSCH--HHHHHHHHHH
T ss_pred HHHHhCCEEEeCchhhCCCCCCEEEEEecCCH--HHHHHHHHHH
Confidence 996 899999998753 33589999998532 5566666654
No 35
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=100.00 E-value=2.9e-42 Score=340.22 Aligned_cols=325 Identities=22% Similarity=0.316 Sum_probs=270.0
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCCc-chHHHHHHHHHHhC------CCC-CcEEEeCCHHHHHHHHH
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQL-K--FPYIYPDP-ESRRLRAALAKDSG------LES-DHILVGCGADELIDLIM 163 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~Y~~~-g~~~lr~~ia~~~g------~~~-~~i~~t~G~~~al~~~~ 163 (423)
.++|+|+.|++++++++.+.+++.+. . ...+|++. +..++|++++++++ +++ ++|++|+|+++++..++
T Consensus 23 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~ 102 (410)
T 3e2y_A 23 PSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSI 102 (410)
T ss_dssp TTSEECSSCCCCSCCCHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHH
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhCccccCCCCCCChHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHH
Confidence 56799999999999999999998873 2 22578654 68999999999986 677 79999999999999999
Q ss_pred HHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC-----------CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcC
Q 014492 164 RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-----------SDFSLNVELIADAVEREKPKCIFLTSPNNPDG 232 (423)
Q Consensus 164 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-----------~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG 232 (423)
+.++++||+|+++.|+|..+...++..|++++.++.+ .++.+|++++++.+. .++++|++++|+||||
T Consensus 103 ~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~-~~~~~v~~~~p~nptG 181 (410)
T 3e2y_A 103 QGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFS-SKTKAIILNTPHNPLG 181 (410)
T ss_dssp HHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCC-TTEEEEEEESSCTTTC
T ss_pred HHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEeccccccccccccccCCcCCHHHHHhhcC-CCceEEEEeCCCCCCC
Confidence 9999999999999999999999999999999999864 345689999999996 6899999999999999
Q ss_pred cCCCHHHHHHHHcC----CCEEEEccCCccccCCCc---hhhhh-ccCCcEEEEccChhhhcccCccccccccCHHHHHH
Q 014492 233 SIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY 304 (423)
Q Consensus 233 ~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~-~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~ 304 (423)
.+++.+++++|++. |+++|+||+|.++.+.+. ....+ ...+++++++|+||.+|++|+|+||+++++++++.
T Consensus 182 ~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~ 261 (410)
T 3e2y_A 182 KVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIGPAHLIKH 261 (410)
T ss_dssp CCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGGGCCEEEECCHHHHHH
T ss_pred cCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCCceEEEEEECHHHHHH
Confidence 99998888887764 999999999998876442 12222 23578999999999999999999999999999998
Q ss_pred HHHhcC--CCCCcHHHHHHHHHHhCC--------hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCC--
Q 014492 305 LWRAKQ--PYNVSVAAEVAACAALQN--------PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS-- 372 (423)
Q Consensus 305 l~~~~~--~~~~~~~~~~a~~~~l~~--------~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~-- 372 (423)
+..... .++.+++++.++..+|++ .+++++.+++++++++++.+.|+++++....|.+++|+|++++.
T Consensus 262 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~ 341 (410)
T 3e2y_A 262 LQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNSVGLKPIVPDGGYFIIADVSSLG 341 (410)
T ss_dssp HHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHTTTCEEEBCSBSSEEEEECGGGC
T ss_pred HHHHHHhhccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCccEEEEEEchhhh
Confidence 876654 578899999999988863 56889999999999999999999986444678889999998853
Q ss_pred -CCC--------HHHHHHHHH-hCCcEEEeCCCCC-------CCCeEEEEecChhhHHHHHHHHhhh
Q 014492 373 -GMD--------AKKLKDDLA-KMGVMIRHYNNKE-------LKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 373 -~~~--------~~~l~~~L~-~~gI~v~~~~~~~-------~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
+.+ ..++.+.|+ ++||.+.+++.+. ..+++||+++.. .+++.+++++|
T Consensus 342 ~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~~--~e~l~~~l~~l 406 (410)
T 3e2y_A 342 ADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCFIKK--DSTLDAAEEIF 406 (410)
T ss_dssp CCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEEECCCC--HHHHHHHHHHH
T ss_pred cccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEEEEEcCC--HHHHHHHHHHH
Confidence 121 347777665 7899999977532 358999999873 36677777665
No 36
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=100.00 E-value=6.1e-42 Score=334.84 Aligned_cols=319 Identities=23% Similarity=0.346 Sum_probs=265.1
Q ss_pred CeeEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCc-chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeE
Q 014492 96 DIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKI 173 (423)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Y~~~-g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~V 173 (423)
++|+|+.|++++++++.+.+++.+ +.....|++. +..++|+++++++++++++|++|+|+++++..+++.++++||+|
T Consensus 26 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~V 105 (381)
T 1v2d_A 26 GAVNLGQGFPSNPPPPFLLEAVRRALGRQDQYAPPAGLPALREALAEEFAVEPESVVVTSGATEALYVLLQSLVGPGDEV 105 (381)
T ss_dssp TCEECCCCSCSSCCCHHHHHHHHHHTTTSCSCCCTTCCHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHHHHHCCTTCEE
T ss_pred CeEEecCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHHHhCCCCCEE
Confidence 479999999999999999999877 3324568655 78999999999999988999999999999999999999999999
Q ss_pred EEcCCCchhhHHHHHHCCCeEEEecCC---CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC----
Q 014492 174 VDCPPTFTMYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---- 246 (423)
Q Consensus 174 l~~~p~y~~~~~~~~~~g~~~~~v~~~---~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~---- 246 (423)
+++.|+|+.+...++..|++++.+|.+ +++.+|++++++.+. .++++|++++|+||||.+++.+++++|++.
T Consensus 106 l~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~ 184 (381)
T 1v2d_A 106 VVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKALT-PRTRALLLNTPMNPTGLVFGERELEAIARLARAH 184 (381)
T ss_dssp EEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHTTCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHT
T ss_pred EEcCCCchhHHHHHHHcCCEEEEEeCCCCCccCCcCHHHHHHhcC-cCCEEEEECCCCCCCCCccCHHHHHHHHHHHHHc
Confidence 999999999999999999999999975 567899999999996 689999999999999999997777666653
Q ss_pred CCEEEEccCCccccCCCc--hhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC--CCCCcHHHHHHH
Q 014492 247 PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAA 322 (423)
Q Consensus 247 ~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~--~~~~~~~~~~a~ 322 (423)
|+++|+||+|.++.++.. ....+ ..++++++.|+||.+|++|+|+||+++++++++.+..... .++.+.+.+.++
T Consensus 185 ~~~li~De~~~~~~~g~~~~~~~~~-~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 263 (381)
T 1v2d_A 185 DLFLISDEVYDELYYGERPRRLREF-APERTFTVGSAGKRLEATGYRVGWIVGPKEFMPRLAGMRQWTSFSAPTPLQAGV 263 (381)
T ss_dssp TCEEEEECTTTTCBSSSCCCCHHHH-CTTTEEEEEEHHHHTTCGGGCCEEEECCTTTHHHHHHHHHHHTSSCCHHHHHHH
T ss_pred CCEEEEEcCccccccCCCCCCHHHh-cCCCEEEEeechhhcCCcccceEEEEeCHHHHHHHHHHHhhcccCCCcHHHHHH
Confidence 999999999998865221 22222 5678999999999999999999999999998888876543 578899999998
Q ss_pred HHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCC--
Q 014492 323 CAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKE-- 397 (423)
Q Consensus 323 ~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~-- 397 (423)
..+|+. .+++++.+++++++++++.+.|++.++....+.+++|+|+++++. + +.+.|.++||.++++..+.
T Consensus 264 ~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~-~---~~~~l~~~gi~v~~g~~~~~~ 339 (381)
T 1v2d_A 264 AEALKLARREGFYEALREGYRRRRDLLAGGLRAMGLRVYVPEGTYFLMAELPGW-D---AFRLVEEARVALIPASAFYLE 339 (381)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTTCCEECCSBSSEEEEECTTC-C---HHHHHHHTCEECEEGGGGCSS
T ss_pred HHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHCCCEecCCCcceEEEEecChH-h---HHHHHHhCCEEEecchHhCCC
Confidence 888874 467888999999999999999988754334456688999999743 2 6666779999999876532
Q ss_pred --CCCeEEEEecChhhHHHHHHHHhhh
Q 014492 398 --LKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 398 --~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.++++||+++.. .+++.+++++|
T Consensus 340 ~~~~~~iRi~~~~~--~~~i~~~~~~l 364 (381)
T 1v2d_A 340 DPPKDLFRFAFCKT--EEELHLALERL 364 (381)
T ss_dssp SCCTTEEEEECCSC--HHHHHHHHHHH
T ss_pred CCCCCEEEEEeCCC--HHHHHHHHHHH
Confidence 468999999862 35666666554
No 37
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=100.00 E-value=1.8e-42 Score=343.15 Aligned_cols=325 Identities=19% Similarity=0.304 Sum_probs=269.6
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhcC-CC---CCCCCCc-chHHHHHHHHHHhC------CCC-CcEEEeCCHHHHHHHH
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQL-KF---PYIYPDP-ESRRLRAALAKDSG------LES-DHILVGCGADELIDLI 162 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~---~~~Y~~~-g~~~lr~~ia~~~g------~~~-~~i~~t~G~~~al~~~ 162 (423)
.++|+|+.|++++++++.+.+++.+. .. ..+|++. +..++|++++++++ +++ ++|++|+|+++++..+
T Consensus 28 ~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~i~~~~g~~~a~~~~ 107 (422)
T 3fvs_A 28 HDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTA 107 (422)
T ss_dssp SCCEECCCSSCSSCCCHHHHHHHHHHHHSCGGGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHHHHH
T ss_pred CCceEeCCCCCCCCCCHHHHHHHHHHHhCCCccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEECChHHHHHHH
Confidence 46799999999999999999998763 22 2578654 78899999999875 666 6999999999999999
Q ss_pred HHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC------------CCCCCHHHHHHHhhcCCceEEEEcCCCCC
Q 014492 163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS------------DFSLNVELIADAVEREKPKCIFLTSPNNP 230 (423)
Q Consensus 163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~------------~~~~d~~~l~~~i~~~~~~~i~l~~p~NP 230 (423)
++.++++||+|+++.|+|..+...++..|++++.+|.+. ++.+|++++++.++ .++++|++++||||
T Consensus 108 ~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~-~~~~~v~~~~p~np 186 (422)
T 3fvs_A 108 FQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFT-SRTKALVLNTPNNP 186 (422)
T ss_dssp HHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCC-TTEEEEEEESSCTT
T ss_pred HHHHcCCCCEEEEcCCCchhhHHHHHHcCCEEEEEecccccccccccccccCCCCCHHHHHhhcC-CCceEEEECCCCCC
Confidence 999999999999999999999999999999999999653 45689999999997 68999999999999
Q ss_pred cCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhc-cCCcEEEEccChhhhcccCccccccccCHHHH
Q 014492 231 DGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII 302 (423)
Q Consensus 231 tG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~ 302 (423)
||.+++.+++++|++. |+++|+||+|.++.+++. ....+. ..+++++++|+||.||++|+|+||++++++++
T Consensus 187 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~ 266 (422)
T 3fvs_A 187 LGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPDHIM 266 (422)
T ss_dssp TCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEECCHHHH
T ss_pred CCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccCcEEEEecchhccCCccceEEEEEeCHHHH
Confidence 9999988777777664 999999999999876542 222222 35789999999999999999999999999999
Q ss_pred HHHHHhcC--CCCCcHHHHHHHHHHhCC--------hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCC
Q 014492 303 EYLWRAKQ--PYNVSVAAEVAACAALQN--------PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS 372 (423)
Q Consensus 303 ~~l~~~~~--~~~~~~~~~~a~~~~l~~--------~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~ 372 (423)
+.+..... .++.+++.+.++..++++ .+++++.+++++++++++.+.|++++.....|++++|+|++++.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~ 346 (422)
T 3fvs_A 267 KHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVGLKPIIPQGSYFLITDISD 346 (422)
T ss_dssp HHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEBCSBSSEEEEECHH
T ss_pred HHHHHHHhhccCCCCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHcCCeecCCCeeeEEEEechh
Confidence 98876644 578899999999988863 56889999999999999999999986434678899999998852
Q ss_pred ---CCC----------HHHHHHHHH-hCCcEEEeCCCC-------CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 373 ---GMD----------AKKLKDDLA-KMGVMIRHYNNK-------ELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 373 ---~~~----------~~~l~~~L~-~~gI~v~~~~~~-------~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
..+ ..++++.|. ++||.+.+++.+ ...+++||+++.. .+++.+++++|
T Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~~--~e~i~~~l~~l 415 (422)
T 3fvs_A 347 FKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFVKD--EATLQAMDEKL 415 (422)
T ss_dssp HHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECCCC--HHHHHHHHHHH
T ss_pred hcccccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcCCCCCCCeEEEEecCC--HHHHHHHHHHH
Confidence 011 557888765 689999997653 3578999999873 36677776665
No 38
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=100.00 E-value=2e-41 Score=330.97 Aligned_cols=326 Identities=16% Similarity=0.231 Sum_probs=266.6
Q ss_pred CCCeeEcCCCCCCCCCCHHHHHHHhcC-CC-CCCCCCc---chHHHHHHHHHHhC--CCCCcEEEeCCHHHHHHHHHHHh
Q 014492 94 PEDIVKIDANENPYGPPPEVREALGQL-KF-PYIYPDP---ESRRLRAALAKDSG--LESDHILVGCGADELIDLIMRCV 166 (423)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~~-~~~Y~~~---g~~~lr~~ia~~~g--~~~~~i~~t~G~~~al~~~~~~l 166 (423)
++++|+|+.++++++++|++.+++.+. .. .+.|+.. -..++++.+++.+| +++++|++|+|+++++..+++.+
T Consensus 23 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~l 102 (383)
T 3kax_A 23 NEELIHAWIADMDFEVPQPIQTALKKRIEHPIFGYTLPPENIGDIICNWTKKQYNWDIQKEWIVFSAGIVPALSTSIQAF 102 (383)
T ss_dssp SSCCEECCCSSCSSCCCHHHHHHHHHHHHSCCCCCCCCCTTHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHH
T ss_pred CCCeeecccccCCCCCCHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHh
Confidence 468999999999999999999998763 22 3566543 12344445555567 67889999999999999999999
Q ss_pred cCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC---CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHH
Q 014492 167 LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS---DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243 (423)
Q Consensus 167 ~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~---~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i 243 (423)
+++||+|+++.|+|..+...++..|++++.+|.+. ++.+|++++++.+. +++++|++++|+||||.+++.+++++|
T Consensus 103 ~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~i~~p~nptG~~~~~~~l~~l 181 (383)
T 3kax_A 103 TKENESVLVQPPIYPPFFEMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQ-QGVKLMLLCSPHNPIGRVWKKEELTKL 181 (383)
T ss_dssp CCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHT-TTCCEEEEESSBTTTTBCCCHHHHHHH
T ss_pred CCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccceecCCcEEEcHHHHHHHhC-cCCeEEEEeCCCCCCCcCcCHHHHHHH
Confidence 99999999999999999999999999999999643 34599999999995 789999999999999999999999888
Q ss_pred Hc---C-CCEEEEccCCccccCCCc---hhhhhcc--CCcEEEEccChhhhcccCcccccccc-CHHHHHHHHHhcC---
Q 014492 244 LE---M-PILVVLDEAYTEFSGLES---RMEWVKK--HDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQ--- 310 (423)
Q Consensus 244 ~~---~-~~~li~Deay~~~~~~~~---~~~~~~~--~~~~i~i~S~SK~~g~~G~R~G~i~~-~~~~~~~l~~~~~--- 310 (423)
++ . |+++|+||+|.++.+.+. ....+.. .+++++++|+||.+|++|+|+||+++ ++++++.+.....
T Consensus 182 ~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~ 261 (383)
T 3kax_A 182 GSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCMAPSKTFNIAGLQASIIIIPNEKLRQAFTSIQYRQG 261 (383)
T ss_dssp HHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHCCCEEEEEccccccccCCCCceeHhhcCccccCcEEEEEEChhhccCcchhheEEEeCCHHHHHHHHHHHhhcc
Confidence 55 3 999999999999876442 2222221 47899999999999999999999998 6888888776543
Q ss_pred CCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHcc-CCCCeec-CCCceEEEEEeCC-CCCHHHHHHHHH-h
Q 014492 311 PYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKD-VPFLNPY-PSYSNFILCEVTS-GMDAKKLKDDLA-K 385 (423)
Q Consensus 311 ~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~-p~~~~~~~~~~~~-~~~~~~l~~~L~-~ 385 (423)
.++.+++++.++..++++ .+++++.+++++++++++.+.|++ ++++.+. +.+++++|++++. +.+..++.+.|. +
T Consensus 262 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 341 (383)
T 3kax_A 262 FHGLNIFAYTAMQSAYTECNDWLNEIRFYIEDNAKFACEYIKDHIPTLSVMKPEGSFLLWIDCSALNLSQDERTKLLEEK 341 (383)
T ss_dssp CCCCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEECCCSBSSEEEEECGGGCCCHHHHHHHHHHT
T ss_pred cCCCCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCceEEEEEEccccCCCHHHHHHHHHhh
Confidence 347899999999999987 577899999999999999999987 6666654 5566778899975 578999999998 7
Q ss_pred CCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 386 MGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 386 ~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
+||.++++..+ ..++++||+++..+ +++.+++++|
T Consensus 342 ~gi~v~~g~~~~~~~~~~iRi~~~~~~--~~i~~~l~~l 378 (383)
T 3kax_A 342 GKIIVEPGEKYGLGGEEHIGINIGCPR--SVLEEILNRL 378 (383)
T ss_dssp SCEECEESGGGCTTCTTEEEEECSSCH--HHHHHHHHHH
T ss_pred CCEEeECchhhcCCCCCeEEEEEcCCH--HHHHHHHHHH
Confidence 89999997653 34689999998643 5677777765
No 39
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=100.00 E-value=6.3e-42 Score=340.09 Aligned_cols=325 Identities=20% Similarity=0.277 Sum_probs=268.6
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhcC-CC----CCCCCCc-chHHHHHHHHHHh----C--CCCC-cEEEeCCHHHHHHH
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQL-KF----PYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCGADELIDL 161 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~----~~~Y~~~-g~~~lr~~ia~~~----g--~~~~-~i~~t~G~~~al~~ 161 (423)
.++|+|+.+.+++++++.+.+++.+. .. ...|+.. +..++|+++++++ | ++++ +|++|+|+++++..
T Consensus 37 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~ 116 (429)
T 1yiz_A 37 YKPLNLGQGFPDYHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYA 116 (429)
T ss_dssp HCCEECCSSSCSSCCCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHH
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcCCEEEecChHHHHHH
Confidence 35799999999999999999998762 22 2568654 6889999999986 6 5678 99999999999999
Q ss_pred HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC----------CCCCCHHHHHHHhhcCCceEEEEcCCCCCc
Q 014492 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS----------DFSLNVELIADAVEREKPKCIFLTSPNNPD 231 (423)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~----------~~~~d~~~l~~~i~~~~~~~i~l~~p~NPt 231 (423)
++++++++||+|+++.|+|+.+...++..|++++.+|.+. ++.+|++++++.+. .++++|++++|+|||
T Consensus 117 ~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~p~npt 195 (429)
T 1yiz_A 117 TIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFN-EKTKMIIINTPHNPL 195 (429)
T ss_dssp HHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCC-TTEEEEEEESSCTTT
T ss_pred HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhc-cCceEEEECCCCCCC
Confidence 9999999999999999999999999999999999999654 46799999999996 689999999999999
Q ss_pred CcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhc-cCCcEEEEccChhhhcccCccccccccCHHHHH
Q 014492 232 GSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 303 (423)
Q Consensus 232 G~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~ 303 (423)
|.+++.+++++|++. |+++|+||+|.++.+++. ....+. ..++++++.|+||.+|++|+|+||+++++++++
T Consensus 196 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~ 275 (429)
T 1yiz_A 196 GKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPEALLK 275 (429)
T ss_dssp CCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEESCHHHHH
T ss_pred CccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCCCcceEEEEeCHHHHH
Confidence 999997777776654 999999999999876432 222222 356899999999999999999999999999999
Q ss_pred HHHHhc--CCCCCcHHHHHHHHHHhCC--------hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCC
Q 014492 304 YLWRAK--QPYNVSVAAEVAACAALQN--------PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSG 373 (423)
Q Consensus 304 ~l~~~~--~~~~~~~~~~~a~~~~l~~--------~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~ 373 (423)
.+.... ..++.+++.|.++.++|+. .+++++.+++++++++++.+.|+++++....+.+++|+|+++++.
T Consensus 276 ~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~ 355 (429)
T 1yiz_A 276 NLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEVGMNPTVPQGGYFMVADWSSL 355 (429)
T ss_dssp HHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHHTCEEEECSBSSEEEEECCSS
T ss_pred HHHHHHhhcccCCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEEcccc
Confidence 887654 3578899999999988876 578899999999999999999988754334566789999999753
Q ss_pred ------------CCHHHHHHHHH-hCCcEEEeCCCCC-------CCCeEEEEecChhhHHHHHHHHhhh
Q 014492 374 ------------MDAKKLKDDLA-KMGVMIRHYNNKE-------LKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 374 ------------~~~~~l~~~L~-~~gI~v~~~~~~~-------~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.+..++.+.|. ++||.++++..+. .++++||+++.. .+++.+++++|
T Consensus 356 ~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~~--~e~i~~~l~~l 422 (429)
T 1yiz_A 356 DSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFFKK--DENLQKAAEIL 422 (429)
T ss_dssp CTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEEECCSC--HHHHHHHHHHH
T ss_pred cccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEEEecCC--HHHHHHHHHHH
Confidence 35678888887 8999999875432 268999999853 35676666655
No 40
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=100.00 E-value=5.6e-42 Score=336.99 Aligned_cols=324 Identities=15% Similarity=0.179 Sum_probs=251.1
Q ss_pred hHHHHHHhCC-CCCCeeEcCCCCC-----CCCCCHHHHHHHhcC----CCCCCC-CCcchHHHHHHHHHHh-C-----CC
Q 014492 83 FEVLSIQLGR-KPEDIVKIDANEN-----PYGPPPEVREALGQL----KFPYIY-PDPESRRLRAALAKDS-G-----LE 145 (423)
Q Consensus 83 ~~~~~~~~~~-~~~~~i~l~~~~~-----~~~~~~~v~~al~~~----~~~~~Y-~~~g~~~lr~~ia~~~-g-----~~ 145 (423)
+..+..++.. ...++|+|+.|+. ++.+++.+.++.. + ...++| |..|.++||+++++++ + ++
T Consensus 16 i~~~~~~~~~~~~~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~ 94 (405)
T 3k7y_A 16 ILKTAREFKEDTCEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYLLGNGTEDFSTLTQNLIFGNNSKYIE 94 (405)
T ss_dssp HHHHHHHHTTSSCSSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCCTTSSCHHHHHHHHHHHHCSSCTTTT
T ss_pred HHHHHHHHhcCCCcCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCCCCCCcHHHHHHHHHHHcCCCCcccc
Confidence 4444444443 2357899999962 2455788888855 3 233678 5569999999999987 2 23
Q ss_pred CCc--EEEeCCHHHHHHHHHHHhcC--CCCeEEEcCCCchhhHHHHHHCCCeEEEecC-C-CCCCCCHHHHHHHhhc-CC
Q 014492 146 SDH--ILVGCGADELIDLIMRCVLD--PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR-K-SDFSLNVELIADAVER-EK 218 (423)
Q Consensus 146 ~~~--i~~t~G~~~al~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~-~-~~~~~d~~~l~~~i~~-~~ 218 (423)
+++ |++|+|+++++.+++..++. | |+|++++|+|+.|...++..|++++.+|. + +++++|++++++.+.+ .+
T Consensus 95 ~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~ 173 (405)
T 3k7y_A 95 DKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVNMIESRGFNLKYINFFDYNLIDINYDLFLNDLRNIPN 173 (405)
T ss_dssp TTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHHHHHTTTCEEEEECCEETTTTEECHHHHHHHHHHSCS
T ss_pred ccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHHHHHcCCeEEEEeccccccCCcCHHHHHHHHHhCCC
Confidence 454 59999999999999998887 8 99999999999999999999999999996 3 3589999999999974 35
Q ss_pred ceEEEEcCC-CCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc-----hhh-hhccCCcEEEEccChhhhcc
Q 014492 219 PKCIFLTSP-NNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES-----RME-WVKKHDNLIVLRTFSKRAGL 287 (423)
Q Consensus 219 ~~~i~l~~p-~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~-----~~~-~~~~~~~~i~i~S~SK~~g~ 287 (423)
++++++++| |||||.+++.+++++|++. +++||+||+|.+|.+++. ... .....+++++++||||.|++
T Consensus 174 ~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l 253 (405)
T 3k7y_A 174 GSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIAFSVCQSFSKNMSL 253 (405)
T ss_dssp SCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTCCEEEEEECTTTSCC
T ss_pred CeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhcCCcEEEEeeCCccCCC
Confidence 678888755 8999999999999998875 999999999999986531 122 22346799999999999999
Q ss_pred cCcccccccc---CHHHHHHHH----Hh-cCCC-CCcHHHHHHHHHHhCCh----HH---HHHHHHHHHHHHHHHHHHHc
Q 014492 288 AGLRVGYGAF---PLSIIEYLW----RA-KQPY-NVSVAAEVAACAALQNP----IY---LEKVKEALIKERERLFKLLK 351 (423)
Q Consensus 288 ~G~R~G~i~~---~~~~~~~l~----~~-~~~~-~~~~~~~~a~~~~l~~~----~~---~~~~~~~~~~~~~~l~~~L~ 351 (423)
+|+|+||+++ ++++++++. .. ...+ +.+.++|.++..+|+++ .| +++++++++++|+.+.+.|+
T Consensus 254 ~GlRiG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~~~~~~~R~~l~~~L~ 333 (405)
T 3k7y_A 254 YGERAGALHIVCKNQEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWIKELSQLSQRITNNRILFFNKLE 333 (405)
T ss_dssp TTTTEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999853 666665543 22 2334 56788999999899874 23 45667789999999999999
Q ss_pred ----cCCC----CeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhh
Q 014492 352 ----DVPF----LNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG--KPEHTDALMECLMH 421 (423)
Q Consensus 352 ----~~~~----~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~ 421 (423)
+++. ....|.+|+|+|+.+++ ++++.|.++||.+.|++ |||++ ..++++++.++|++
T Consensus 334 ~~~~~~g~~~~~~~~~p~gg~f~~~~l~~-----~~~~~L~~~gV~v~p~~--------Ris~a~~~~~~i~~~~~~i~~ 400 (405)
T 3k7y_A 334 TYQKKYNLNYDWNVYKKQRGLFSFVPLLA-----KIAEHLKTHHIYIINNG--------RINVSGITKNNVDYIADKICL 400 (405)
T ss_dssp HHGGGGTCCCCGGGGSSCCSSEEECGGGG-----GGTTTTTTTTEECCTTS--------EEEGGGCCTTHHHHHHHHHHH
T ss_pred hhhhhcCCCCCCccccCCceEEEecCCCH-----HHHHHHHHCCEeecCCC--------eEEEeccCHHHHHHHHHHHHH
Confidence 7752 23467889999998752 44566678899999864 99997 35566777777665
No 41
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=100.00 E-value=2.3e-42 Score=345.37 Aligned_cols=320 Identities=17% Similarity=0.239 Sum_probs=259.3
Q ss_pred CCCCeeEcCCCCCCCCCCHHHHHHHhcC-------CCCCCCCC-cchHHHHHHHHHHh----CCCCCcEEEeCCHHHHHH
Q 014492 93 KPEDIVKIDANENPYGPPPEVREALGQL-------KFPYIYPD-PESRRLRAALAKDS----GLESDHILVGCGADELID 160 (423)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~-------~~~~~Y~~-~g~~~lr~~ia~~~----g~~~~~i~~t~G~~~al~ 160 (423)
++.++|+|+.|+++++++|.+.+++.+. ...++|+. .+..+||+++++++ ++++++|++|+|+++++.
T Consensus 67 ~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~g~~~~~~~i~~t~G~~~al~ 146 (449)
T 3qgu_A 67 PDAKIISLGIGDTTEPLPKYIADAMAKAAAGLATREGYSGYGAEQGQGALREAVASTFYGHAGRAADEIFISDGSKCDIA 146 (449)
T ss_dssp TTCCCEECSSCCCCCCCCHHHHHHHHHHHHGGGGSCCCCCSTTTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHH
T ss_pred CCCCEEEeeCCCCCCCCCHHHHHHHHHHHHhhccccCCCCCCCCCCcHHHHHHHHHHHHcCCCCCHHHEEEccCHHHHHH
Confidence 4567999999999999999999888652 12356844 67899999999998 788899999999999999
Q ss_pred HHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCe----------EEEecCCC--CCCCCHHHHHHHhhcCCceEEEEcCCC
Q 014492 161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAA----------VVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPN 228 (423)
Q Consensus 161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~----------~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~ 228 (423)
.+ ..++++||.|+++.|+|..+...++..|++ ++.+|.++ ++..|++++ .++++|++++||
T Consensus 147 ~~-~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~v~l~~p~ 219 (449)
T 3qgu_A 147 RI-QMMFGSKPTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKA------KRTDIIFFCSPN 219 (449)
T ss_dssp HH-HHHHCSSSCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGGC------CCCSEEEEESSC
T ss_pred HH-HHHhCCCCEEEEcCCCChhHHHHHHHcCCcccccccccceeEEEecccccCCcCChhHc------CCCCEEEEeCCC
Confidence 98 778999999999999999999999999998 99998654 344454321 578999999999
Q ss_pred CCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhc-cCCcEEEEccChhhhcccCccccccccCHH
Q 014492 229 NPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLS 300 (423)
Q Consensus 229 NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~ 300 (423)
||||.+++.+++++|++. |+++|+||+|.+|.+++. ....+. ..++++++.||||.||++|+|+||++++++
T Consensus 220 NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~ 299 (449)
T 3qgu_A 220 NPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWTVVPKA 299 (449)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEEECCTT
T ss_pred CCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccceeEEEecCHH
Confidence 999999999988888764 999999999999876542 222222 256789999999999999999999999887
Q ss_pred HHH--------HHHHh--cCCCCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEE
Q 014492 301 IIE--------YLWRA--KQPYNVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILC 368 (423)
Q Consensus 301 ~~~--------~l~~~--~~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~ 368 (423)
+++ .+... ...++.+.++|.++.+++++ .+++++++++++++++++.+.|+++++....+.+++|+|+
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~ 379 (449)
T 3qgu_A 300 LKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEMGFSVYGGDDAPYIWV 379 (449)
T ss_dssp CBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEESSSSSEEEE
T ss_pred HHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCeeEEEE
Confidence 764 23222 23357899999999999986 3678899999999999999999988654445677999999
Q ss_pred EeCCCCCHHHHHHHHHh-CCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 369 EVTSGMDAKKLKDDLAK-MGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 369 ~~~~~~~~~~l~~~L~~-~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
+++ +.+..++++.|++ +||.++++..+ ..++++||++... .+++.+++++|
T Consensus 380 ~~~-~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis~~~~--~e~i~~~l~~l 433 (449)
T 3qgu_A 380 GFP-GKPSWDVFAEILERCNIVTTPGSGYGPAGEGFVRASAFGS--RENILEAVRRF 433 (449)
T ss_dssp ECT-TSCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSC--HHHHHHHHHHH
T ss_pred ECC-CCCHHHHHHHHHHHCCEEEecchHhCCCCCCeEEEEecCC--HHHHHHHHHHH
Confidence 998 7889999988885 59999997653 3468999997642 24566555554
No 42
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=100.00 E-value=4.2e-42 Score=340.82 Aligned_cols=321 Identities=16% Similarity=0.175 Sum_probs=258.1
Q ss_pred eeEcCCCCCC---CCCCHHHHHHHhcC----C--CCCCCCCc-chHHHHHHHHHHhCCCCCcEEEeCCHHHHH--HHHHH
Q 014492 97 IVKIDANENP---YGPPPEVREALGQL----K--FPYIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELI--DLIMR 164 (423)
Q Consensus 97 ~i~l~~~~~~---~~~~~~v~~al~~~----~--~~~~Y~~~-g~~~lr~~ia~~~g~~~~~i~~t~G~~~al--~~~~~ 164 (423)
+|+|+.|+++ +++++.+.+++.+. . ...+|+++ |.++||+++++++++++++|++|+|+++++ .++++
T Consensus 34 ~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~i~~t~G~~~al~l~~~~~ 113 (422)
T 3d6k_A 34 SLDLTRGKPSAEQLDLSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRELWAEALGLPADLVVAQDGSSLNIMFDLISW 113 (422)
T ss_dssp CEECCCCSCCHHHHHTTGGGGGCSTTCCBCTTCCBTTSSCCSSCCHHHHHHHHHHHTCCGGGEEECSSCHHHHHHHHHHH
T ss_pred eEeCCCCCCChhhCCCcHHHHHHHHHHHhhccchhhhCCCCCCCCHHHHHHHHHHhCCChhHEEEecchHHHHHHHHHHH
Confidence 6999999998 88888888877642 1 13578765 699999999999999999999999999987 77778
Q ss_pred HhcCC------------CCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEE-EcCCCCCc
Q 014492 165 CVLDP------------GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIF-LTSPNNPD 231 (423)
Q Consensus 165 ~l~~~------------gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~-l~~p~NPt 231 (423)
.+..+ +|+|+++.|+|..|...++..|++++.+|.+++ ++|++++++.+++.++++|+ +++|||||
T Consensus 114 ~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~-g~d~~~l~~~l~~~~~~~v~~~~~~~NPt 192 (422)
T 3d6k_A 114 SYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMINVPMTDE-GPDMGVVRELVKDPQVKGMWTVPVFGNPT 192 (422)
T ss_dssp HHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT-EECHHHHHHHHTSTTEEEEEECCSSCTTT
T ss_pred HhcCcccccccccccCCCCEEEEeCCccHHHHHHHHHcCCEEEecCCCCC-CCCHHHHHHHHhcCCCeEEEEcCCCCCCC
Confidence 77765 347999999999999999999999999997654 59999999999745789988 67999999
Q ss_pred CcCCCHHHHHHHHc----C-CCEEEEccCCcc--ccCCCc---hh-hh---hccCCcEEEEccChhhhcccCcccccccc
Q 014492 232 GSIINDEDLLKILE----M-PILVVLDEAYTE--FSGLES---RM-EW---VKKHDNLIVLRTFSKRAGLAGLRVGYGAF 297 (423)
Q Consensus 232 G~~~~~~~l~~i~~----~-~~~li~Deay~~--~~~~~~---~~-~~---~~~~~~~i~i~S~SK~~g~~G~R~G~i~~ 297 (423)
|.+++.+++++|++ . |++||+||+|.+ |.+.+. .. .. .+..+++++++||||. +++|+|+||+++
T Consensus 193 G~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~GlriG~~~~ 271 (422)
T 3d6k_A 193 GVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKI-THAGSGVSFFAS 271 (422)
T ss_dssp CCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTT-SCTTSSCEEEEC
T ss_pred CCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhh-cCcccceEEEEe
Confidence 99999997777664 4 899999999985 543321 12 11 2356889999999998 779999999999
Q ss_pred CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCC-h---HHHHHHHHHHHHHHHHHHHHHcc----CCCCe-ecCCCceEE
Q 014492 298 PLSIIEYLWRAKQP--YNVSVAAEVAACAALQN-P---IYLEKVKEALIKERERLFKLLKD----VPFLN-PYPSYSNFI 366 (423)
Q Consensus 298 ~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~-~---~~~~~~~~~~~~~~~~l~~~L~~----~~~~~-~~p~~~~~~ 366 (423)
++++++.+...... ++.+.++|.++..+|++ . +++++.++.++++++++.+.|.+ ++++. ..|++++|+
T Consensus 272 ~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~ 351 (422)
T 3d6k_A 272 SKENIEWYASHANVRGIGPNKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTSPTGGYFI 351 (422)
T ss_dssp CHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEECCCSBSSCE
T ss_pred CHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceEEeCCCcceEE
Confidence 99999988876543 67899999999999998 3 56778888899999988888764 44444 467789999
Q ss_pred EEEeCCCCCHHHHHHHHHhCCcEEEeCCC-C-----CCCCeEEEEec--ChhhHHHHHHHHh
Q 014492 367 LCEVTSGMDAKKLKDDLAKMGVMIRHYNN-K-----ELKGYVRVSVG--KPEHTDALMECLM 420 (423)
Q Consensus 367 ~~~~~~~~~~~~l~~~L~~~gI~v~~~~~-~-----~~~~~iRis~~--~~~~~~~l~~al~ 420 (423)
|+++++. +...+.+.|.++||.+++++. + ..++++||+++ +.++++++.+.|+
T Consensus 352 ~~~~~~~-~~~~~~~~l~~~gV~v~~~g~~f~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~ 412 (422)
T 3d6k_A 352 SVDVVPG-TASRVVELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSLPPVAELEVAMDGFA 412 (422)
T ss_dssp EEEESTT-CHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCHHHHHHHHHHHH
T ss_pred EEECCCC-CHHHHHHHHHHCCeEEEcCccccCCCCCCCCCeEEEecCCCCHHHHHHHHHHHH
Confidence 9999854 677888888899999999432 3 24689999998 4444444444443
No 43
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=100.00 E-value=6.1e-42 Score=336.77 Aligned_cols=325 Identities=21% Similarity=0.319 Sum_probs=264.7
Q ss_pred CCeeEcCCCCCCCC--CCHHHHHHHhcC-CC----CCCCCC-cchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh
Q 014492 95 EDIVKIDANENPYG--PPPEVREALGQL-KF----PYIYPD-PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV 166 (423)
Q Consensus 95 ~~~i~l~~~~~~~~--~~~~v~~al~~~-~~----~~~Y~~-~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l 166 (423)
+++|+|+.+.++.. +++++.+++.+. .. ...|++ .+..++|+++++++|+++++|++|+|+++++..+++++
T Consensus 32 ~~~i~l~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~~l~~~la~~~g~~~~~v~~~~g~~~al~~~~~~~ 111 (397)
T 2zyj_A 32 PGILSFAGGLPAPELFPKEEAAEAAARILREKGEVALQYSPTEGYAPLRAFVAEWIGVRPEEVLITTGSQQALDLVGKVF 111 (397)
T ss_dssp TTCEEESSCCCCGGGCCHHHHHHHHHHHHHHHHHHHTSCCCTTCCHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHH
T ss_pred CCceecCCCCCCchhCCHHHHHHHHHHHHHhcchhhhCCCCCCCCHHHHHHHHHHhCCChhhEEEeccHHHHHHHHHHHh
Confidence 46799998865432 567888887652 11 256754 47899999999999988899999999999999999999
Q ss_pred cCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEE-EcCCCCCcCcCCCHHHHHHHHc
Q 014492 167 LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIF-LTSPNNPDGSIINDEDLLKILE 245 (423)
Q Consensus 167 ~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~-l~~p~NPtG~~~~~~~l~~i~~ 245 (423)
+++||+|+++.|+|+.+...++..|++++.+|.+++ ++|++++++.+++.++++|+ +++|+||||.+++.+++++|++
T Consensus 112 ~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~ 190 (397)
T 2zyj_A 112 LDEGSPVLLEAPSYMGAIQAFRLQGPRFLTVPAGEE-GPDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQ 190 (397)
T ss_dssp CCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT-EECHHHHHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHcCCEEEecCcCCC-CCCHHHHHHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHH
Confidence 999999999999999999999999999999997554 58999999999755789885 6799999999999997776665
Q ss_pred C----CCEEEEccCCccccCCCc---hhhhhccC---CcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC--CC
Q 014492 246 M----PILVVLDEAYTEFSGLES---RMEWVKKH---DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YN 313 (423)
Q Consensus 246 ~----~~~li~Deay~~~~~~~~---~~~~~~~~---~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~--~~ 313 (423)
. |+++|+||+|.++.+.+. ....++.. +++++++|+||.+| +|+|+||+++++++++.+...... ++
T Consensus 191 ~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~~~~~~l~~~~~~~~~~ 269 (397)
T 2zyj_A 191 MVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVLS-PGLRVAFAVAHPEALQKLVQAKQGADLH 269 (397)
T ss_dssp HHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCCEEEEEESTTTTC-GGGCCEEEECCHHHHHHHHHHHHHHHSS
T ss_pred HHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCCeEEEEeccccccc-ccceeEEEecCHHHHHHHHHHHHhhcCC
Confidence 3 999999999999876432 22333333 78999999999999 999999999999999888765443 56
Q ss_pred CcHHHHHHHHHHhCCh--HHHHHHHHHHHHHHHHHHHHHcc-CC-CCee-cCCCceEEEEEeCCCCCHHHHHHHHHhCCc
Q 014492 314 VSVAAEVAACAALQNP--IYLEKVKEALIKERERLFKLLKD-VP-FLNP-YPSYSNFILCEVTSGMDAKKLKDDLAKMGV 388 (423)
Q Consensus 314 ~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~-~~-~~~~-~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI 388 (423)
.+.+++.++..+|++. +++++.+++++++++++.+.|++ ++ ++.+ .|++++|+|++++++.+..++.+.|.++||
T Consensus 270 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~gi 349 (397)
T 2zyj_A 270 TPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDREVPKEVRYTRPKGGMFVWMELPKGLSAEGLFRRALEENV 349 (397)
T ss_dssp CCHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTSEECCCSBSSEEEEECSTTCCHHHHHHHHHHTTE
T ss_pred CCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEccCCccEEEEEEcCCCCCHHHHHHHHHHCCC
Confidence 7999999999999876 56888899999999999999987 45 3554 577899999999877788999999998899
Q ss_pred EEEeCCCC----CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 389 MIRHYNNK----ELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 389 ~v~~~~~~----~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.++++..+ ..++++||+++.. +.+++.+++++|
T Consensus 350 ~v~~g~~f~~~~~~~~~iRis~~~~-~~~~i~~~~~~l 386 (397)
T 2zyj_A 350 AFVPGGPFFANGGGENTLRLSYATL-DREGIAEGVRRL 386 (397)
T ss_dssp EEEESGGGCTTSCCTTEEEEECSSS-CHHHHHHHHHHH
T ss_pred EEechHHhcCCCCCCCeEEEEcCCC-CHHHHHHHHHHH
Confidence 99987653 2468999999864 234555555443
No 44
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=100.00 E-value=1.3e-41 Score=336.33 Aligned_cols=325 Identities=17% Similarity=0.211 Sum_probs=264.8
Q ss_pred CCeeEcCCCCC----CCCCCHHHHHHHhcC-C--CCCCCCC-cchHHHHHHHHHHhC------------CCCCcEEEeCC
Q 014492 95 EDIVKIDANEN----PYGPPPEVREALGQL-K--FPYIYPD-PESRRLRAALAKDSG------------LESDHILVGCG 154 (423)
Q Consensus 95 ~~~i~l~~~~~----~~~~~~~v~~al~~~-~--~~~~Y~~-~g~~~lr~~ia~~~g------------~~~~~i~~t~G 154 (423)
.++|+|+.+.+ .+++++.+.+++.+. . ...+|++ .+..++|++++++++ +++++|++|+|
T Consensus 33 ~~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~~~g 112 (416)
T 1bw0_A 33 KPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSG 112 (416)
T ss_dssp SCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEESH
T ss_pred CCeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCccCCcCCCCCCHHHHHHHHHHHHhhhcccccCCCCCCcceEEEeCC
Confidence 56899999975 578889999988762 2 2256855 478999999999998 77899999999
Q ss_pred HHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC--CCCCCHHHHHHHhhcCCceEEEEcCCCCCcC
Q 014492 155 ADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDG 232 (423)
Q Consensus 155 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG 232 (423)
+++++..++++++++||+|+++.|+|+.+...++..|++++.+|.+. ++.+|++++++.+. .+++++++++|+||||
T Consensus 113 ~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~-~~~~~v~i~~p~nptG 191 (416)
T 1bw0_A 113 GSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKD-DKTKLLIVTNPSNPCG 191 (416)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCC-TTEEEEEEESSCTTTC
T ss_pred hHHHHHHHHHHhCCCCCEEEEcCCCcHhHHHHHHHcCcEEEEeecCcccCCCCCHHHHHHHhc-cCCeEEEEeCCCCCCC
Confidence 99999999999999999999999999999999999999999998643 46799999999997 5789999999999999
Q ss_pred cCCCHHHHHHHHc---C-CCEEEEccCCccccCCCc----h---hhhhccCCcEEEEccChhhhcccCccccccccCHH-
Q 014492 233 SIINDEDLLKILE---M-PILVVLDEAYTEFSGLES----R---MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS- 300 (423)
Q Consensus 233 ~~~~~~~l~~i~~---~-~~~li~Deay~~~~~~~~----~---~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~- 300 (423)
.+++.+++++|++ . |++||+||+|.++.+.+. . ...+...+++++++|+||.|+++|+|+||++++++
T Consensus 192 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~~~~~~~ 271 (416)
T 1bw0_A 192 SNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWLLYVDPH 271 (416)
T ss_dssp CCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEECTT
T ss_pred cccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHccCCCcEEEEecchhhCCCCCceEEEEEeeCch
Confidence 9999666666655 3 999999999999875432 1 22223345689999999999999999999998653
Q ss_pred -----HHHHHHHhc-CCCCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeC
Q 014492 301 -----IIEYLWRAK-QPYNVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVT 371 (423)
Q Consensus 301 -----~~~~l~~~~-~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~ 371 (423)
+...+.+.. ..++.++++|.++.++|+. .+++++.+++++++++++.+.|++++++.+ .|.+++|+|++++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~ 351 (416)
T 1bw0_A 272 GNGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGECIGLAPTMPRGAMYLMSRID 351 (416)
T ss_dssp CSCHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCBTTEEEEEEC
T ss_pred hhHHHHHHHHHHHhccccCCCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEEEeCC
Confidence 333333322 3578899999999999985 678899999999999999999998865554 4667899999986
Q ss_pred C-----CCCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 372 S-----GMDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 372 ~-----~~~~~~l~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
. ..+..++.+.|. ++||.++++..+..++++||+++..+ +++.+++++|
T Consensus 352 ~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~iRis~~~~~--e~l~~~l~~l 406 (416)
T 1bw0_A 352 LEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTTRPV--EVYREAVERI 406 (416)
T ss_dssp GGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCSCH--HHHHHHHHHH
T ss_pred HHHcCCCCCHHHHHHHHHHHCCEEEecccccCCCCeEEEEecCCH--HHHHHHHHHH
Confidence 3 257888999885 89999999876656789999997543 5677777765
No 45
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=100.00 E-value=1e-41 Score=338.68 Aligned_cols=320 Identities=17% Similarity=0.180 Sum_probs=263.8
Q ss_pred CCeeEcCCCCC-CCCCCHHH--HHHHhcC-C--CCCCCCCc-chHHHHHHHHHHh-----CCCCCc---EEEeCCHHHHH
Q 014492 95 EDIVKIDANEN-PYGPPPEV--REALGQL-K--FPYIYPDP-ESRRLRAALAKDS-----GLESDH---ILVGCGADELI 159 (423)
Q Consensus 95 ~~~i~l~~~~~-~~~~~~~v--~~al~~~-~--~~~~Y~~~-g~~~lr~~ia~~~-----g~~~~~---i~~t~G~~~al 159 (423)
+++|+|+.|++ +++.+|.+ .+++.+. . ...+|++. |..++|+++++++ ++++++ |++|+|+++++
T Consensus 47 ~~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~~t~g~~~al 126 (430)
T 2x5f_A 47 STTYNATIGMATNKDGKMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDNPELSIDNMSRPIVTNALTHGL 126 (430)
T ss_dssp TCSEECCCSSCEETTEECCCHHHHTTBSSCCGGGTSSCCCTTCCHHHHHHHHHHHHHHCTTCCGGGBCCCEEESHHHHHH
T ss_pred CCcEEeeeeeccCCCCchhhHHHHHHHHhcCcccccccCCCCCCHHHHHHHHHHHhccCcccCCCccceEEEcCCchHHH
Confidence 56899999999 88877766 7776653 2 23678665 7899999999999 888889 99999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCchhhHHHHHH-CCCeEEEecCCC-CCCCCHHHHHHHhhcC--CceEEEEcCCCCCcCcCC
Q 014492 160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAV-NGAAVVKVPRKS-DFSLNVELIADAVERE--KPKCIFLTSPNNPDGSII 235 (423)
Q Consensus 160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~~v~~~~-~~~~d~~~l~~~i~~~--~~~~i~l~~p~NPtG~~~ 235 (423)
..++++++++||+|+++.|+|..+...++. .|++++.+|.++ ++.+|++++++.+++. +++++++++||||||.++
T Consensus 127 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~ 206 (430)
T 2x5f_A 127 SLVGDLFVNQDDTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKDGHYTTDSLVEALQSYNKDKVIMILNYPNNPTGYTP 206 (430)
T ss_dssp HHHHHHHCCTTCEEEEESSCCTHHHHHHTTTTCCEEEEECCBCTTSCBCSHHHHHHHHHCCSSEEEEEECSSCTTTCCCC
T ss_pred HHHHHHHhCCCCEEEEcCCcCccHHHHHHHhcCCeEEEEeccCccCCcCHHHHHHHHHhcCCCCEEEEEcCCCCCCCCcC
Confidence 999999999999999999999999999999 999999999654 4689999999999742 789999999999999999
Q ss_pred CHHHHHHHHc---------CCCEEEEccCCccccCCCc---hhh-hhcc-CCc---EEEEccChhhhcccCcccccccc-
Q 014492 236 NDEDLLKILE---------MPILVVLDEAYTEFSGLES---RME-WVKK-HDN---LIVLRTFSKRAGLAGLRVGYGAF- 297 (423)
Q Consensus 236 ~~~~l~~i~~---------~~~~li~Deay~~~~~~~~---~~~-~~~~-~~~---~i~i~S~SK~~g~~G~R~G~i~~- 297 (423)
+.+++++|++ .|+++|+||+|.++.+++. ... .+.. .++ +++++|+||.||++|+|+||+++
T Consensus 207 ~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~ 286 (430)
T 2x5f_A 207 THKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFMTFG 286 (430)
T ss_dssp CHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEB
T ss_pred CHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCCeEEEEEe
Confidence 9766666553 5799999999999876432 222 3333 677 99999999999999999999999
Q ss_pred --CHHHHHHHHHhc------CCCCCcHHHHHHHHHHhC-ChHHHHH---HHHHHHHHHHHHHHHHc----cCCCCee-cC
Q 014492 298 --PLSIIEYLWRAK------QPYNVSVAAEVAACAALQ-NPIYLEK---VKEALIKERERLFKLLK----DVPFLNP-YP 360 (423)
Q Consensus 298 --~~~~~~~l~~~~------~~~~~~~~~~~a~~~~l~-~~~~~~~---~~~~~~~~~~~l~~~L~----~~~~~~~-~p 360 (423)
++++++.+.... ..++.+.++|.++..+|+ +.+|.+. .+++++++++++.+.|+ +.+ +.+ .+
T Consensus 287 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g-~~~~~~ 365 (430)
T 2x5f_A 287 TSDQTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYHSH-WQAYDF 365 (430)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGTTT-EEECCC
T ss_pred cCCHHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCC-ceeeCC
Confidence 999998887654 347899999999999998 8766666 89999999999999998 554 443 45
Q ss_pred CCceEEEEEeCCCCCHHHHHHHHHh-CCcEEEeCCCCCCCCeEEEEec-C-hhhHHHHHHHHh
Q 014492 361 SYSNFILCEVTSGMDAKKLKDDLAK-MGVMIRHYNNKELKGYVRVSVG-K-PEHTDALMECLM 420 (423)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~l~~~L~~-~gI~v~~~~~~~~~~~iRis~~-~-~~~~~~l~~al~ 420 (423)
.+++|+|++++ +.+..++.+.|.+ +||.++++ .++++||+++ . .++++++.++|+
T Consensus 366 ~~g~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g----~~~~iRis~~~~~~e~i~~~~~~l~ 423 (430)
T 2x5f_A 366 NSGYFMAIKVH-DVDPEALRKHLIDKYSIGVIAL----NATDIRIAFSCVEKDDIPHVFDSIA 423 (430)
T ss_dssp CBSSEEEEEES-SSCHHHHHHHHHHHHCEECEEC----SSSEEEEEGGGSCGGGHHHHHHHHH
T ss_pred CceEEEEeCCC-CCCHHHHHHHHHHhCCEEEecC----CCCeEEEEEecCCHHHHHHHHHHHH
Confidence 56788999998 7789999999996 99999997 3689999998 4 333444444443
No 46
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=3e-41 Score=330.96 Aligned_cols=324 Identities=20% Similarity=0.240 Sum_probs=261.4
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhcC-CC-CCCCCCcchHH-HHHHHHHHh----C--CCCCcEEEeCCHHHHHHHHHHH
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQL-KF-PYIYPDPESRR-LRAALAKDS----G--LESDHILVGCGADELIDLIMRC 165 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~-~~~Y~~~g~~~-lr~~ia~~~----g--~~~~~i~~t~G~~~al~~~~~~ 165 (423)
+++|+|+.+++++++++++.+++.+. .. ...|++. ..+ +|+++++++ | +++++|++|+|+++++..++++
T Consensus 28 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~-~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~ 106 (390)
T 1d2f_A 28 ADLLPFTISDMDFATAPCIIEALNQRLMHGVFGYSRW-KNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQ 106 (390)
T ss_dssp --CEECCSSSCSSCCCHHHHHHHHHHHTTCCCCCCCS-CCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHHHH
T ss_pred CCeeEeeecCCCCCCCHHHHHHHHHHHhCCCCCCCCC-ChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHHHHHHHH
Confidence 46899999999999999999998773 22 3567665 677 999999986 5 6788999999999999999999
Q ss_pred hcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC---CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHH
Q 014492 166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS---DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK 242 (423)
Q Consensus 166 l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~---~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~ 242 (423)
++++||+|+++.|+|..+...++..|++++.+|.+. +|.+|++++++.+++.++++|++++|+||||.+++.+++++
T Consensus 107 l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~ 186 (390)
T 1d2f_A 107 WSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEI 186 (390)
T ss_dssp SSCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCCTTHHHH
T ss_pred hcCCCCEEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEEeCCCCCCCcCcCHHHHHH
Confidence 999999999999999999999999999999999643 34589999999997558999999999999999999766666
Q ss_pred HHc---C-CCEEEEccCCccccCCCch---hhhhccCCcEEEEccChhhhcccCccccccccC-HHHHHHHHHhcC---C
Q 014492 243 ILE---M-PILVVLDEAYTEFSGLESR---MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQ---P 311 (423)
Q Consensus 243 i~~---~-~~~li~Deay~~~~~~~~~---~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~-~~~~~~l~~~~~---~ 311 (423)
|++ . |+++|+||+|.++.+.+.. ...+...-... +.|+||.+|++|+|+||++++ +++++.+..... .
T Consensus 187 l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~ 265 (390)
T 1d2f_A 187 MADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWAL-LTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGRDG 265 (390)
T ss_dssp HHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEE-EECSHHHHTCGGGCCEEEEECSHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhh-ccCccHhhcccChhheEEEECCHHHHHHHHHHHhhhcc
Confidence 554 3 9999999999998764321 11121110023 999999999999999999985 788888776543 3
Q ss_pred C-CCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHcc-CCCCeec-CCCceEEEEEeCCC-CCHHHHHHHHH-h
Q 014492 312 Y-NVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKD-VPFLNPY-PSYSNFILCEVTSG-MDAKKLKDDLA-K 385 (423)
Q Consensus 312 ~-~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~-p~~~~~~~~~~~~~-~~~~~l~~~L~-~ 385 (423)
+ +.+.+++.++.++++. .+++++.+++++++++++.+.|++ ++++.+. +.+++++|+++++. .+..++.+.|. +
T Consensus 266 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 345 (390)
T 1d2f_A 266 LSSPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLNIDDNALQKALIEQ 345 (390)
T ss_dssp CCSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCCCCSBCSEEEEECGGGCCCHHHHHHHHHHT
T ss_pred cCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEEecCCccEEEEEEccccCCCHHHHHHHHHHH
Confidence 4 7899999988888875 578899999999999999999988 6655544 44556778999753 67889999998 6
Q ss_pred CCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014492 386 MGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 386 ~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
+||.++++..+. .++++||+++..+ +++.+++++|
T Consensus 346 ~gi~v~~g~~f~~~~~~~~Ris~~~~~--~~l~~~l~~l 382 (390)
T 1d2f_A 346 EKVAIMPGYTYGEEGRGFVRLNAGCPR--SKLEKGVAGL 382 (390)
T ss_dssp TCEECEEGGGGCGGGTTEEEEECCSCH--HHHHHHHHHH
T ss_pred cCEEeeCccccCCCCCCeEEEEecCCH--HHHHHHHHHH
Confidence 899999976532 4689999999753 6788887765
No 47
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=100.00 E-value=1.5e-41 Score=337.06 Aligned_cols=347 Identities=18% Similarity=0.276 Sum_probs=264.8
Q ss_pred hHHHHhcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHH--H-------------HHHHhcCCCCCCC-CCc
Q 014492 66 FIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPE--V-------------REALGQLKFPYIY-PDP 129 (423)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~--v-------------~~al~~~~~~~~Y-~~~ 129 (423)
++++++..+.++ ++..+...+... +.++|+|+.|.++....|. . .++... ...| +..
T Consensus 6 ~~s~~~~~~~~~-~~~~~~~~~~~~---~~~~i~l~~G~p~~~~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~Y~~~~ 78 (425)
T 2r2n_A 6 FITAASAARNPS-PIRTMTDILSRG---PKSMISLAGGLPNPNMFPFKTAVITVENGKTIQFGEEMMKR---ALQYSPSA 78 (425)
T ss_dssp GSCHHHHTCCCC-SGGGHHHHHHHS---CTTCEECCCCCCCGGGCSEEEEEEEETTSCCEEECHHHHHH---HTSCCCTT
T ss_pred HHHHHHhcCCCc-hHHHHHHHhhcC---CCCeEEcCCcCCCchhCCHHHHHHHHhhcccccccccchhh---hcCCCCCC
Confidence 445556555555 233333333322 2467999999887644331 0 011111 1357 445
Q ss_pred chHHHHHHHHHHh----CCCC---------CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEE
Q 014492 130 ESRRLRAALAKDS----GLES---------DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVK 196 (423)
Q Consensus 130 g~~~lr~~ia~~~----g~~~---------~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~ 196 (423)
|.+++|+++++++ |++. ++|++|+|+++++..++++++++||+|+++.|+|..+...++..|++++.
T Consensus 79 G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~ 158 (425)
T 2r2n_A 79 GIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIIN 158 (425)
T ss_dssp CCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHGGGTCEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEE
Confidence 8889999999885 7643 69999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCHHHHHHHhhc-----------CCceEEEE-cCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCcccc
Q 014492 197 VPRKSDFSLNVELIADAVER-----------EKPKCIFL-TSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFS 260 (423)
Q Consensus 197 v~~~~~~~~d~~~l~~~i~~-----------~~~~~i~l-~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~ 260 (423)
+|.+++ ++|+++|++.+++ .++++|++ ++||||||.+++.+++++|++. |++||+||+|.++.
T Consensus 159 v~~~~~-~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~~~~~ 237 (425)
T 2r2n_A 159 VASDES-GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQ 237 (425)
T ss_dssp ECEETT-EECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGB
T ss_pred eCcCCC-CCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCccccc
Confidence 997543 6999999998862 36888877 5999999999999977776653 99999999999887
Q ss_pred CCCc---hhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhCC------h
Q 014492 261 GLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQN------P 329 (423)
Q Consensus 261 ~~~~---~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~------~ 329 (423)
+.+. ....++..+++++++||||.++ +|+|+||+++++++++.+..... .++.+.++|.++..+|++ .
T Consensus 238 ~~g~~~~~~~~~~~~~~~i~~~s~SK~~~-~GlRiG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~ 316 (425)
T 2r2n_A 238 FNKFRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGPKPLIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFM 316 (425)
T ss_dssp SSSSCCCCTGGGCTTSCEEEEEESTTTTC-STTCCEEEEEEHHHHHHHHHHHHTTTCSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCccccCCCCCEEEEccchhhcc-CccceEEEecCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcccchHH
Confidence 6432 2333444678999999999998 99999999999999998887653 478899999999999976 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcc-CCCC-e-ecCCCceEEEEEeCCCCCHHH-HHHHHHhCCcEEEeCCCCC-----CCC
Q 014492 330 IYLEKVKEALIKERERLFKLLKD-VPFL-N-PYPSYSNFILCEVTSGMDAKK-LKDDLAKMGVMIRHYNNKE-----LKG 400 (423)
Q Consensus 330 ~~~~~~~~~~~~~~~~l~~~L~~-~~~~-~-~~p~~~~~~~~~~~~~~~~~~-l~~~L~~~gI~v~~~~~~~-----~~~ 400 (423)
+|+++++++++++++++.+.|++ ++++ . ..|++|+|+|+++++..+..+ +.+.|.++||.++++..+. ..+
T Consensus 317 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~~~ 396 (425)
T 2r2n_A 317 AHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVKGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSP 396 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSSEEEEEETTCSCCHHHHHTHHHHTTEECEEGGGGSSSTTSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceEEEEEEeCCCCCHHHHHHHHHHHCCcEEechhhhcCCCCCCCC
Confidence 56788899999999999999987 5544 3 357889999999986556556 5778889999999876532 358
Q ss_pred eEEEEecChhhHHHHHHHHhhh
Q 014492 401 YVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 401 ~iRis~~~~~~~~~l~~al~~l 422 (423)
++||+++.. +.+++.+++++|
T Consensus 397 ~iRis~~~~-~~~~i~~~~~~l 417 (425)
T 2r2n_A 397 YLRASFSSA-SPEQMDVAFQVL 417 (425)
T ss_dssp EEEEECSSC-CHHHHHHHHHHH
T ss_pred EEEEEeCCC-CHHHHHHHHHHH
Confidence 999999732 225555555544
No 48
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=2.5e-41 Score=333.80 Aligned_cols=348 Identities=20% Similarity=0.276 Sum_probs=275.4
Q ss_pred HHHhcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhc-CCC-CCCCCC-cchHHHHHHHHHHhC-
Q 014492 68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKF-PYIYPD-PESRRLRAALAKDSG- 143 (423)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~-~~~Y~~-~g~~~lr~~ia~~~g- 143 (423)
++++..+.++ +...+.....+....++++|+|+.+++++++++.+.+++ + +.. ...|++ .+..++|++++++++
T Consensus 17 ~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~-~~l~~~~~~y~~~~g~~~l~~~la~~~~~ 94 (409)
T 2gb3_A 17 SDRVLLTEES-PIRKLVPFAEMAKKRGVRIHHLNIGQPDLKTPEVFFERI-YENKPEVVYYSHSAGIWELREAFASYYKR 94 (409)
T ss_dssp CHHHHSCCCC-TTGGGHHHHHHHHHTTCEEEECSSCCCCSCCCTHHHHHH-HHTCCSSCCCCCTTCCHHHHHHHHHHHHH
T ss_pred HHHhhcCCcc-HHHHHHHHHHHHHhcCCCEEeccCCCCCCCCCHHHHHHH-HHHhcCCCCCCCCCCcHHHHHHHHHHHHH
Confidence 4444444444 233333333344344567899999999988889999999 6 432 246865 468899999999973
Q ss_pred -----CCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC--CCCCCHHHHHHHhhc
Q 014492 144 -----LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVER 216 (423)
Q Consensus 144 -----~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~ 216 (423)
+++++|++|+|+++++..++++++++||+|+++.|+|..+...++..|++++.+|.+. ++.+ +++|++.+.
T Consensus 95 ~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-~~~l~~~l~- 172 (409)
T 2gb3_A 95 RQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAI-PQNLESFIN- 172 (409)
T ss_dssp TSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCC-CTTGGGGCC-
T ss_pred HhCCCCCHHHEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCcc-HHHHHHhhC-
Confidence 5678999999999999999999999999999999999999999999999999999763 4445 889999886
Q ss_pred CCceEEEEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCchhhhhcc-CCcEEEEccChhhhcccCcc
Q 014492 217 EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVKK-HDNLIVLRTFSKRAGLAGLR 291 (423)
Q Consensus 217 ~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~~~~~~~-~~~~i~i~S~SK~~g~~G~R 291 (423)
.++++|++++|+||||.+++.+++++|++. |+++|+||+|..+.+.+.....+.. .+++++++|+||.+|++|+|
T Consensus 173 ~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r 252 (409)
T 2gb3_A 173 ERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKFSACGAR 252 (409)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTTEEEEEESTTTTTCGGGC
T ss_pred cCCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCccccCCCCEEEEecchhccCCccce
Confidence 589999999999999999998777776653 9999999999988764322222222 46799999999999999999
Q ss_pred ccccccCH-HHHHHHHHhcCCC-CCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCe-ecCCCceEEE
Q 014492 292 VGYGAFPL-SIIEYLWRAKQPY-NVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLN-PYPSYSNFIL 367 (423)
Q Consensus 292 ~G~i~~~~-~~~~~l~~~~~~~-~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~~~~ 367 (423)
+||+++++ ++++.+......+ +.+++.+.++.++|+. .+++++.+++++++++++.+.|+++++.. ..|.+++|+|
T Consensus 253 ~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~ 332 (409)
T 2gb3_A 253 VGCLITRNEELISHAMKLAQGRLAPPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEEHGLKRFTKPSGAFYIT 332 (409)
T ss_dssp CEEEECSCHHHHHHHHHHHHHSCCCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCBCCCSBSSEEE
T ss_pred EEEEEECcHHHHHHHHHHHhccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHcCceeeeCCCeeEEEE
Confidence 99999988 8988887765545 7899999999999965 57788999999999999999998875333 3466788999
Q ss_pred EEeCCCCCHHHHHHHHHhC------CcEEEeCCCC-----CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 368 CEVTSGMDAKKLKDDLAKM------GVMIRHYNNK-----ELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 368 ~~~~~~~~~~~l~~~L~~~------gI~v~~~~~~-----~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
++++ +.+..++.+.|.++ ||.++++..+ ..++++||+++..+ +++.+++++|
T Consensus 333 ~~~~-~~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~~~~--e~i~~~~~~l 395 (409)
T 2gb3_A 333 AELP-VEDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACVLEK--DLLSRAIDVL 395 (409)
T ss_dssp EECS-SSCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECCSCH--HHHHHHHHHH
T ss_pred EEeC-CCCHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeCCCH--HHHHHHHHHH
Confidence 9997 67889999999876 9999987543 23689999998432 4555555543
No 49
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=100.00 E-value=1.2e-40 Score=326.32 Aligned_cols=330 Identities=19% Similarity=0.309 Sum_probs=266.9
Q ss_pred HHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcC-CC-CCCCCCcchHHHHHHHH----HHhC--CCCCcEEEeCCHHH
Q 014492 86 LSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-KF-PYIYPDPESRRLRAALA----KDSG--LESDHILVGCGADE 157 (423)
Q Consensus 86 ~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~-~~~Y~~~g~~~lr~~ia----~~~g--~~~~~i~~t~G~~~ 157 (423)
..++++ +.++|+|+.++++++++|++.+++.+. .. .+.|+. +..+++++++ +++| +++++|++|+|+++
T Consensus 25 ~~~~~~--~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~-~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~ 101 (391)
T 4dq6_A 25 MEKKYG--TNDLLPMWVADMDFKAAPCIIDSLKNRLEQEIYGYTT-RPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIP 101 (391)
T ss_dssp HHHHHS--CSCSEECCSSSCSSCCCHHHHHHHHHHHTTCCCCCBC-CCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHH
T ss_pred cccccC--CCCceeccccCCCCCCCHHHHHHHHHHHhCCCCCCCC-CCHHHHHHHHHHHHHHhCCCCcHHHeEEcCChHH
Confidence 445565 367899999999999999999999873 22 355644 2344555555 4567 67899999999999
Q ss_pred HHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC----CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCc
Q 014492 158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK----SDFSLNVELIADAVEREKPKCIFLTSPNNPDGS 233 (423)
Q Consensus 158 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~----~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~ 233 (423)
++..++++++++||+|+++.|+|..+...++..|++++.+|.+ .++.+|++++++.+++ +++|++++|+||||.
T Consensus 102 a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~v~i~~p~nptG~ 179 (391)
T 4dq6_A 102 AISLLINELTKANDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD--VKLFILCNPHNPVGR 179 (391)
T ss_dssp HHHHHHHHHSCTTCEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT--EEEEEEESSBTTTTB
T ss_pred HHHHHHHHhCCCCCEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc--CCEEEEECCCCCCCc
Confidence 9999999999999999999999999999999999999999975 2345899999999974 999999999999999
Q ss_pred CCCHHHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhcc--CCcEEEEccChhhhcccCccccccccCH-HHHH
Q 014492 234 IINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKK--HDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIE 303 (423)
Q Consensus 234 ~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~--~~~~i~i~S~SK~~g~~G~R~G~i~~~~-~~~~ 303 (423)
+++.+++++|++. |+++|+||+|.++.+.+. ....+.. .++++++.|+||.+|++|+|+||+++++ ++++
T Consensus 180 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~ 259 (391)
T 4dq6_A 180 VWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDEKDYK 259 (391)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCSHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhccCcccceEEEEeCCHHHHH
Confidence 9999888888664 999999999999876442 2222221 4788999999999999999999999875 8888
Q ss_pred HHHHhc---CCCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHcc-CCCCeec-CCCceEEEEEeCC-CCCH
Q 014492 304 YLWRAK---QPYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKD-VPFLNPY-PSYSNFILCEVTS-GMDA 376 (423)
Q Consensus 304 ~l~~~~---~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~-p~~~~~~~~~~~~-~~~~ 376 (423)
.+.... ..++.+.+++.++..+++. .+++++.+++++++++++.+.|++ ++++.+. +.+++++|++++. +.+.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (391)
T 4dq6_A 260 LLDDAFTRIDIKRNNCFSLVATEASYNNGESWLESFLEYLESNIDFAIKYINENMPKLKVRKPEGTYLLWVDFSALGLSD 339 (391)
T ss_dssp HHHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCSBSSEEEEECGGGCCCH
T ss_pred HHHHHHHhhcCCCCCHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEecCCCccEEEEEEhhhcCCCH
Confidence 777653 3357889999988888875 577899999999999999999987 6666654 5556777899985 6789
Q ss_pred HHHHHHHHhC-CcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 377 KKLKDDLAKM-GVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 377 ~~l~~~L~~~-gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.++.+.|.++ ||.++++..+ ..++++||+++..+ +++.+++++|
T Consensus 340 ~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~--~~i~~~l~~l 386 (391)
T 4dq6_A 340 EELESILVQKGKVALNQGNSFGIGGSGYQRINLACPR--SMLEEALIRI 386 (391)
T ss_dssp HHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECCSCH--HHHHHHHHHH
T ss_pred HHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEcCCH--HHHHHHHHHH
Confidence 9999999977 9999997653 34689999998543 5677777665
No 50
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=8.8e-42 Score=338.79 Aligned_cols=325 Identities=20% Similarity=0.243 Sum_probs=263.4
Q ss_pred CCeeEcCCCCCCCC--CCHHHHHHHhcC-CC----CCCCCC-cchHHHHHHHHHHh----C---CCCCcEEEeCCHHHHH
Q 014492 95 EDIVKIDANENPYG--PPPEVREALGQL-KF----PYIYPD-PESRRLRAALAKDS----G---LESDHILVGCGADELI 159 (423)
Q Consensus 95 ~~~i~l~~~~~~~~--~~~~v~~al~~~-~~----~~~Y~~-~g~~~lr~~ia~~~----g---~~~~~i~~t~G~~~al 159 (423)
+++|+|+.+.++.. +++++.+++.+. .. ...|++ .+..++|+++++++ | +++++|++|+|+++++
T Consensus 43 ~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~v~~t~G~~~al 122 (425)
T 1vp4_A 43 KDAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQQAL 122 (425)
T ss_dssp TTCEECCCCSCCGGGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHHHHHCCCSCCGGGEEEEEHHHHHH
T ss_pred CCceeCCCCCCCcccCCHHHHHHHHHHHHhhcchhhcCCCCCCCCHHHHHHHHHHHHhccCCCCCCcccEEEeccHHHHH
Confidence 46899998876543 567888887652 21 256755 47899999999999 8 6678999999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-------CCceEEE-EcCCCCCc
Q 014492 160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-------EKPKCIF-LTSPNNPD 231 (423)
Q Consensus 160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-------~~~~~i~-l~~p~NPt 231 (423)
..++++++++||+|+++.|+|..+...++..|++++.+|.+++ ++|++++++.+++ .++++|+ +++|+|||
T Consensus 123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~npt 201 (425)
T 1vp4_A 123 DLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPLEDD-GMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPA 201 (425)
T ss_dssp HHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT-EECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTT
T ss_pred HHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEEeccCCC-CCCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCC
Confidence 9999999999999999999999999999999999999997554 5999999999874 3789985 68999999
Q ss_pred CcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHH
Q 014492 232 GSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY 304 (423)
Q Consensus 232 G~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~ 304 (423)
|.+++.+++++|++. |+++|+||+|.++.+++. ....++..+++++++|+||.+| +|+|+||+++++++++.
T Consensus 202 G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~~~~~~ 280 (425)
T 1vp4_A 202 GVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLA-PGLRIGMVAGSKEFIRK 280 (425)
T ss_dssp CCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTTC-GGGCEEEEECCHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhCCCCCEEEEeccccccc-cccceEEEeeCHHHHHH
Confidence 999998887776653 999999999999876432 2333344578999999999999 99999999999999988
Q ss_pred HHHhcCC--CCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccC-C---CCee-cCCCceEEEEEeCCCC
Q 014492 305 LWRAKQP--YNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDV-P---FLNP-YPSYSNFILCEVTSGM 374 (423)
Q Consensus 305 l~~~~~~--~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~-~---~~~~-~p~~~~~~~~~~~~~~ 374 (423)
+...... ++.++++|.++..+|++ .+++++.+++++++++++.+.|++. + ++.+ .|++++|+|++++++.
T Consensus 281 l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~g~~~~~~~~~~~ 360 (425)
T 1vp4_A 281 IVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWLTLPEGF 360 (425)
T ss_dssp HHHHHHHHHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCEECCCSBSSEEEEECCTTC
T ss_pred HHHHhhhhcCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccEEEEEEcCCCC
Confidence 8765543 56799999999999976 3678889999999999999999874 3 3554 4778999999998666
Q ss_pred CHHHHHHHHHhCCcEEEeCCCC----CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 375 DAKKLKDDLAKMGVMIRHYNNK----ELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 375 ~~~~l~~~L~~~gI~v~~~~~~----~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
+..++.+.|.++||.++++..+ ..++++||+++.. +.+++.+++++|
T Consensus 361 ~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~~-~~e~i~~~l~~l 411 (425)
T 1vp4_A 361 DTWEMFEYAKRKKVFYVPGRVFKVYDEPSPSMRLSFCLP-PDEKIVEGIKRL 411 (425)
T ss_dssp CTTTTHHHHHHHTEECEEGGGGCTTCCCCSEEEEECSSS-CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCCEEECchhhcCCCCCCCeEEEEeCCC-CHHHHHHHHHHH
Confidence 7788999999889999987653 2468999999864 224444444443
No 51
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=100.00 E-value=2.1e-41 Score=336.68 Aligned_cols=319 Identities=18% Similarity=0.260 Sum_probs=258.4
Q ss_pred CCCeeEcCCCCCCCCCCHHHHHHHhcC-C------CCCCCC-CcchHHHHHHHHHHh----CCCCCcEEEeCCHHHHHHH
Q 014492 94 PEDIVKIDANENPYGPPPEVREALGQL-K------FPYIYP-DPESRRLRAALAKDS----GLESDHILVGCGADELIDL 161 (423)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~------~~~~Y~-~~g~~~lr~~ia~~~----g~~~~~i~~t~G~~~al~~ 161 (423)
+.++|+|+.|+++++++|.+.+++.+. . ..++|+ ..+..+||+++++++ ++++++|++|+|+++++..
T Consensus 55 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~~~~~~~i~~t~G~~~al~~ 134 (432)
T 3ei9_A 55 DAQVISLGIGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAKCDISR 134 (432)
T ss_dssp TCCCEECSSCCCCSCCCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHHH
T ss_pred CCCeEEccCCCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHccCCCCcceEEECCChHHHHHH
Confidence 467899999999999999999888752 1 124674 457899999999996 7888999999999999997
Q ss_pred HHHHhcCCCCeEEEcCCCchhhHHHHHHCCC------------eEEEecCCC--CCCCCHHHHHHHhhcCCceEEEEcCC
Q 014492 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGA------------AVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSP 227 (423)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~------------~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p 227 (423)
+ ..++++||.|+++.|+|+.+...++..|. +++.+|.+. ++..|+++ ..++++|++++|
T Consensus 135 l-~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~~~~~~v~l~~p 207 (432)
T 3ei9_A 135 L-QVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLST------VGRTDIIFFCSP 207 (432)
T ss_dssp H-HHHHCTTCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCCGGG------CCCCSEEEEESS
T ss_pred H-HHHcCCCCEEEEeCCCCHHHHHHHHHcCCcccccccccccCceEEeccCcccCCcCChhh------CCCCCEEEEeCC
Confidence 5 66889999999999999999998888774 677777643 34445332 257899999999
Q ss_pred CCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCch--hhhh-ccCCcEEEEccChhhhcccCccccccccCHH
Q 014492 228 NNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESR--MEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS 300 (423)
Q Consensus 228 ~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~--~~~~-~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~ 300 (423)
|||||.+++.+++++|++. |++||+||+|.+|.+++.. .... ...+++++++||||.||++|+|+||++++++
T Consensus 208 ~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~ 287 (432)
T 3ei9_A 208 NNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKK 287 (432)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEECCTT
T ss_pred CCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCChhhcCCCCCeEEEEecchhccCCcccceEEEEEChH
Confidence 9999999999999988654 9999999999998765432 2112 2246789999999999999999999999888
Q ss_pred H--------HHHHHHhc--CCCCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEE
Q 014492 301 I--------IEYLWRAK--QPYNVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILC 368 (423)
Q Consensus 301 ~--------~~~l~~~~--~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~ 368 (423)
+ ++.+.+.. ..++.+.++|.++.+++.+ .+|+++++++++++++++.+.|+++++....+.+++|+|+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~ 367 (432)
T 3ei9_A 288 LLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSLGYDVYGGKNAPYVWV 367 (432)
T ss_dssp CBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEECSSSSEEEE
T ss_pred HhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEE
Confidence 7 66665543 3456899999999999875 3678899999999999999999988643344578999999
Q ss_pred EeCCCCCHHHHHHHHH-hCCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 369 EVTSGMDAKKLKDDLA-KMGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 369 ~~~~~~~~~~l~~~L~-~~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
+++ +.+..++++.|+ ++||.++++..+ .+++++||++...+ +++.+++++|
T Consensus 368 ~~~-~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis~~~~~--e~l~~~l~rl 421 (432)
T 3ei9_A 368 HFP-NQSSWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVSAFGHR--ENILEACRRF 421 (432)
T ss_dssp ECT-TSCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSCH--HHHHHHHHHH
T ss_pred ECC-CCCHHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEEecCCH--HHHHHHHHHH
Confidence 998 677888888887 569999998763 34789999987643 6788888876
No 52
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.7e-41 Score=333.73 Aligned_cols=323 Identities=23% Similarity=0.354 Sum_probs=264.0
Q ss_pred CeeEcCCCCCCCCCCHHHHHHHhcC-CC-CCCCCCc-chHHHHHHHHHHh----C--CCCC-cEEEeCCHHHHHHHHHHH
Q 014492 96 DIVKIDANENPYGPPPEVREALGQL-KF-PYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCGADELIDLIMRC 165 (423)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~-~~-~~~Y~~~-g~~~lr~~ia~~~----g--~~~~-~i~~t~G~~~al~~~~~~ 165 (423)
++|+|+.+++++++++.+.+++.+. .. ...|++. +..++|+++++++ | ++++ +|++|+|+++++..++++
T Consensus 26 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~~al~~~~~~ 105 (411)
T 2o0r_A 26 GAVNLGQGFPDEDGPPKMLQAAQDAIAGGVNQYPPGPGSAPLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVLG 105 (411)
T ss_dssp TCEESSCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHHHHHHHHH
T ss_pred CeeeccCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCceEEEeCCHHHHHHHHHHH
Confidence 4799999999988899999988763 22 3568654 6789999999996 6 4677 999999999999999999
Q ss_pred hcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC---CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHH
Q 014492 166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS---DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK 242 (423)
Q Consensus 166 l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~---~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~ 242 (423)
++++||+|+++.|+|..+...++..|++++.+|.+. ++.+|++++++.+. .++++|++++|+||||.+++.+++++
T Consensus 106 ~~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~-~~~~~v~l~~~~nptG~~~~~~~l~~ 184 (411)
T 2o0r_A 106 LVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDADALRRAVT-PRTRALIINSPHNPTGAVLSATELAA 184 (411)
T ss_dssp HCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHH
T ss_pred hcCCCCEEEEeCCCcHhHHHHHHHcCCEEEEeeccccccCCCCCHHHHHHhhc-cCceEEEEeCCCCCCCCCCCHHHHHH
Confidence 999999999999999999999999999999999653 46699999999997 68999999999999999999877666
Q ss_pred HHcC----CCEEEEccCCccccCCCc---hhhhhc-cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC--CC
Q 014492 243 ILEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PY 312 (423)
Q Consensus 243 i~~~----~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~--~~ 312 (423)
|++. |+++|+||+|.++.+.+. ....+. ..++++++.|+||.+|++|+|+||+++++++++.+..... .+
T Consensus 185 i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~ 264 (411)
T 2o0r_A 185 IAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACGPAELIAGVRAAKQYLSY 264 (411)
T ss_dssp HHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCTTTCEEEEECCHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcCCccceEEEEeeCHHHHHHHHHHHhhccC
Confidence 6553 999999999998876432 122222 2567999999999999999999999999999988876543 46
Q ss_pred CCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCC--CCCHHHHHHHHH-hCC
Q 014492 313 NVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS--GMDAKKLKDDLA-KMG 387 (423)
Q Consensus 313 ~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~--~~~~~~l~~~L~-~~g 387 (423)
+.+.+.+.++..+|+. .+++++.+++++++++++.+.|++++ +.+ .+.+++|+|+++++ +.+..++.+.|. ++|
T Consensus 265 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~g 343 (411)
T 2o0r_A 265 VGGAPFQPAVALALDTEDAWVAALRNSLRARRDRLAAGLTEIG-FAVHDSYGTYFLCADPRPLGYDDSTEFCAALPEKVG 343 (411)
T ss_dssp CCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHT-CEECCCCBSSEEEEECGGGTCCCHHHHHHHHHHHHS
T ss_pred CCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHcC-CEecCCCeeEEEEEecCCCCCCCHHHHHHHHHHhCC
Confidence 7788888888888875 67889999999999999999998874 443 45567799999974 257888999887 789
Q ss_pred cEEEeCCCC-C------------CCCeEEEEecChhhHHHHHHHHhhh
Q 014492 388 VMIRHYNNK-E------------LKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 388 I~v~~~~~~-~------------~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
|.++++..+ . .++++||+++.. .+++.+++++|
T Consensus 344 i~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~~~--~e~i~~~~~~l 389 (411)
T 2o0r_A 344 VAAIPMSAFCDPAAGQASQQADVWNHLVRFTFCKR--DDTLDEAIRRL 389 (411)
T ss_dssp EECEEGGGGSCCC--------CCGGGCEEEECCSC--HHHHHHHHHHH
T ss_pred EEEcChhhhCCCccccccccccCCCCeEEEEecCC--HHHHHHHHHHH
Confidence 999987542 1 357999999853 24566666554
No 53
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=100.00 E-value=4e-41 Score=331.87 Aligned_cols=325 Identities=22% Similarity=0.333 Sum_probs=261.9
Q ss_pred CCCCeeEcCCCCCCCC--CCHHHHHHHhcC-C----CCCCCCCc-chHHHHHHHHHHh----C--CCCCcEEEeCCHHHH
Q 014492 93 KPEDIVKIDANENPYG--PPPEVREALGQL-K----FPYIYPDP-ESRRLRAALAKDS----G--LESDHILVGCGADEL 158 (423)
Q Consensus 93 ~~~~~i~l~~~~~~~~--~~~~v~~al~~~-~----~~~~Y~~~-g~~~lr~~ia~~~----g--~~~~~i~~t~G~~~a 158 (423)
++.++|+|+.+.++.. +++++.+++.+. . ... |++. +..++|+++++++ | +++++|++|+|++++
T Consensus 32 ~g~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~-y~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a 110 (407)
T 2zc0_A 32 KGVKLISLAAGDPDPELIPRAVLGEIAKEVLEKEPKSVM-YTPANGIPELREELAAFLKKYDHLEVSPENIVITIGGTGA 110 (407)
T ss_dssp SSCCCEECCSCCCCTTTSCHHHHHHHHHHHHHHCGGGGS-CCCTTCCHHHHHHHHHHHHHHSCCCCCGGGEEEESHHHHH
T ss_pred CCCceEeCCCCCCCchhCCHHHHHHHHHHHHhhcccccc-CCCCCCCHHHHHHHHHHHHHhcCCCCCcceEEEecCHHHH
Confidence 3457899998876543 567788877652 1 124 7554 7899999999998 8 567899999999999
Q ss_pred HHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhh----c-CCceEEE-EcCCCCCcC
Q 014492 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE----R-EKPKCIF-LTSPNNPDG 232 (423)
Q Consensus 159 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~----~-~~~~~i~-l~~p~NPtG 232 (423)
+..++++++++||+|+++.|+|..+...++..|++++.+|.+++ ++|++++++.++ + .++++|+ +++|+||||
T Consensus 111 ~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG 189 (407)
T 2zc0_A 111 LDLLGRVLIDPGDVVITENPSYINTLLAFEQLGAKIEGVPVDND-GMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMG 189 (407)
T ss_dssp HHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT-EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTC
T ss_pred HHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCEEEEcccCCC-CCCHHHHHHHHHhhhcccCCceEEEECCCCCCCCC
Confidence 99999999999999999999999999999999999999997554 599999999986 4 3788875 679999999
Q ss_pred cCCCHHHHHHHHc---C-CCEEEEccCCccccCCCc---hhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHH
Q 014492 233 SIINDEDLLKILE---M-PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYL 305 (423)
Q Consensus 233 ~~~~~~~l~~i~~---~-~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l 305 (423)
.+++.+++++|++ . |+++|+||+|..+.+.+. ....++..+++++++|+||.++ +|+|+||+++++++++.+
T Consensus 190 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~~~~~~~ 268 (407)
T 2zc0_A 190 VTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSKVLG-TGFRIGWIIAEGEILKKV 268 (407)
T ss_dssp CCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGCSSCCEEEEEESTTTTC-TTSCCEEEECCHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcCCCCCEEEEcccccccC-CCcceEEEecCHHHHHHH
Confidence 9999996666554 4 999999999998875432 1233334468999999999999 999999999999999988
Q ss_pred HHhcCC--CCCcHHHHHHHHHHhCCh----HHHHHHHHHHHHHHHHHHHHHcc-CCCCee-cCCCceEEEEEeCCCCCHH
Q 014492 306 WRAKQP--YNVSVAAEVAACAALQNP----IYLEKVKEALIKERERLFKLLKD-VPFLNP-YPSYSNFILCEVTSGMDAK 377 (423)
Q Consensus 306 ~~~~~~--~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~-~p~~~~~~~~~~~~~~~~~ 377 (423)
...... ++.+++.+.++..+++.. +++++.+++++++++++.+.|++ .+.+.+ .|.+++|+|++++++.+..
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (407)
T 2zc0_A 269 LMQKQPIDFCAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENHLPNAEFTKPIAGMFVMFFLPEGADGI 348 (407)
T ss_dssp HHHHTTTTSSSCHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHHHHCTTSCBCCCSBSSEEEEECSTTCCHH
T ss_pred HHHHHhhcCCCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCcEEEEEEcCCCCCHH
Confidence 876655 457889999999999874 56778888999999999999987 454543 5678899999998777899
Q ss_pred HHHHHHHhC-CcEEEeCCCC----CCCCeEEEEecC--hhhHHHHHHHHh
Q 014492 378 KLKDDLAKM-GVMIRHYNNK----ELKGYVRVSVGK--PEHTDALMECLM 420 (423)
Q Consensus 378 ~l~~~L~~~-gI~v~~~~~~----~~~~~iRis~~~--~~~~~~l~~al~ 420 (423)
++.+.|.++ ||.++++..+ ..++++||+++. .++++++.++|+
T Consensus 349 ~l~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~ 398 (407)
T 2zc0_A 349 SFANELMEREGVVVVPGKPFYTDESGKNAIRLNFSRPSKEEIPIGIKKLA 398 (407)
T ss_dssp HHHHHHHHHTCEECBCSGGGCSSSCCTTEEEEECSSSCTTHHHHHHHHHH
T ss_pred HHHHHHHHhCCeEEECchhccCCCCCCCeEEEEeCCCCHHHHHHHHHHHH
Confidence 999999876 9999987653 246899999985 344555554444
No 54
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=100.00 E-value=5.9e-41 Score=330.42 Aligned_cols=325 Identities=15% Similarity=0.230 Sum_probs=264.8
Q ss_pred CCeeEcCCCC-CCCCCCHHHHHHHhcC-CC--CCCC-CCcchHHHHHHHHHH----hCCC--C-CcEEEeCCHHHHHHHH
Q 014492 95 EDIVKIDANE-NPYGPPPEVREALGQL-KF--PYIY-PDPESRRLRAALAKD----SGLE--S-DHILVGCGADELIDLI 162 (423)
Q Consensus 95 ~~~i~l~~~~-~~~~~~~~v~~al~~~-~~--~~~Y-~~~g~~~lr~~ia~~----~g~~--~-~~i~~t~G~~~al~~~ 162 (423)
.++|+|+.|. ++++++|++++++.+. .. ...| +..+..+++++++++ +|++ + ++|++|+|+++++..+
T Consensus 39 ~~~id~~~g~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~~ 118 (407)
T 3nra_A 39 GRPVDFSHGDVDAHEPTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLA 118 (407)
T ss_dssp SCCEETTSCCTTTSCCCTTHHHHHHHHHHHTHHHHSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHH
T ss_pred CceeeecCcCCCCCCCcHHHHHHHHHHHhcCCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHH
Confidence 3589999864 4588899999988763 21 1346 345667777776655 5653 4 7999999999999999
Q ss_pred HHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC------CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCC
Q 014492 163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR------KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236 (423)
Q Consensus 163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~------~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~ 236 (423)
+.+++++||+|+++.|+|..+...++..|++++.+|. ++++.+|++++++.+. .++++|++++|+||||.+++
T Consensus 119 ~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~p~nptG~~~~ 197 (407)
T 3nra_A 119 VAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFK-AGARVFLFSNPNNPAGVVYS 197 (407)
T ss_dssp HHTTCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHH-TTCCEEEEESSCTTTCCCCC
T ss_pred HHHhCCCCCEEEEcCCcccchHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHh-hCCcEEEEcCCCCCCCcccC
Confidence 9999999999999999999999999999999999997 4678899999999997 58999999999999999999
Q ss_pred HHHHHHHHc---C-CCEEEEccCCccccCCCch---hhhh--ccCCcEEEEccChhhhcccCccccccccCHHHHHHHHH
Q 014492 237 DEDLLKILE---M-PILVVLDEAYTEFSGLESR---MEWV--KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR 307 (423)
Q Consensus 237 ~~~l~~i~~---~-~~~li~Deay~~~~~~~~~---~~~~--~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~ 307 (423)
.+++++|++ . |+++|+||+|..+.+++.. ...+ ...+++++++|+||.+|++|+|+||+++++++++.+..
T Consensus 198 ~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~ 277 (407)
T 3nra_A 198 AEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGSRAIIARMEK 277 (407)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEECHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcCHHHHHHHHH
Confidence 776666655 3 9999999999988765422 2222 23678999999999999999999999999999998876
Q ss_pred hcCC--CCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCC-CCCHHHHHHH
Q 014492 308 AKQP--YNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS-GMDAKKLKDD 382 (423)
Q Consensus 308 ~~~~--~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~-~~~~~~l~~~ 382 (423)
.... ++.+++++.++..+|+. .+++++.+++++++++++.+.|++++++.+ .+.+++|+|++++. +.+..++.+.
T Consensus 278 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (407)
T 3nra_A 278 LQAIVSLRAAGYSQAVLRGWFDEAPGWMEDRIARHQAIRDELLHVLRGCEGVFARTPQAGSYLFPRLPKLAVAPAEFVKI 357 (407)
T ss_dssp HHHHHTSSSCHHHHGGGGGTTCCCTTHHHHHHHHHHHHHHHHHHHHHTSTTCBCCCCSBSSEECCBCCCBSSCHHHHHHH
T ss_pred HHhhhccCCChHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEeCCCCCCCHHHHHHH
Confidence 6543 56778888888888875 578889999999999999999999866664 56677999999986 6788999999
Q ss_pred HH-hCCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 383 LA-KMGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 383 L~-~~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
|. ++||.++++..+ ...+++||+++.. .+++.+++++|
T Consensus 358 l~~~~gi~v~~g~~~~~~~~~~iRis~~~~--~~~i~~~~~~l 398 (407)
T 3nra_A 358 LRLQAGVVVTPGTEFSPHTADSVRLNFSQD--HEAAVAAARRI 398 (407)
T ss_dssp HHHHHCEECEEGGGTCTTCTTBEEEECCSC--HHHHHHHHHHH
T ss_pred HHHhCCEEEeCchhhCCCCCCEEEEEeCCC--HHHHHHHHHHH
Confidence 97 579999987653 3578999999863 35666666654
No 55
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=100.00 E-value=2.5e-40 Score=327.41 Aligned_cols=318 Identities=17% Similarity=0.191 Sum_probs=255.7
Q ss_pred CCeeEcCCCCC-----CCCCCHHHHHHHhcCCC--CCCCC-CcchHHHHHHHHHHh-CC-CCC---cEEEeCCHHHHHHH
Q 014492 95 EDIVKIDANEN-----PYGPPPEVREALGQLKF--PYIYP-DPESRRLRAALAKDS-GL-ESD---HILVGCGADELIDL 161 (423)
Q Consensus 95 ~~~i~l~~~~~-----~~~~~~~v~~al~~~~~--~~~Y~-~~g~~~lr~~ia~~~-g~-~~~---~i~~t~G~~~al~~ 161 (423)
.++|+|+.|++ ++++++.+.+++.+... ...|+ ..|..++|+++++++ +. .++ +|++|+|+++++..
T Consensus 38 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~g~~~al~~ 117 (418)
T 3rq1_A 38 ENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDSEHVGYAPIAGIPDFLCAAEKECFGNFRPEGHIRSIATAGGTGGIHH 117 (418)
T ss_dssp GGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHHH
T ss_pred CCeEECCCCcccCCCCCccccHHHHHHHHHhcccccCCCCCCCChHHHHHHHHHHHhcccCccccccEEECCchHHHHHH
Confidence 46899999965 88889999999887432 24674 458899999999987 22 356 99999999999999
Q ss_pred HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC-CCCCCCCHHHHHHHhhcC---Cce-EEEEcCC-CCCcCcCC
Q 014492 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR-KSDFSLNVELIADAVERE---KPK-CIFLTSP-NNPDGSII 235 (423)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~d~~~l~~~i~~~---~~~-~i~l~~p-~NPtG~~~ 235 (423)
++++++++||+|+++.|+|..|...++..|++++.+|. ++++.+|++++++.+.+. +++ ++++++| |||||.++
T Consensus 118 ~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~ 197 (418)
T 3rq1_A 118 LIHNYTEPGDEVLTADWYWGAYRVICSDTGRTLVTYSLFDEHNNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSI 197 (418)
T ss_dssp HHHHHSCTTCEEEEESSCCTHHHHHHHHTTCEEEEECSBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCC
T ss_pred HHHHhcCCCCEEEECCCCchhHHHHHHHcCCEEEEEeeeCCCCCcCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCC
Confidence 99999999999999999999999999999999999996 355799999999999741 566 7888899 99999999
Q ss_pred CHHHHHHHHc---------C-CCEEEEccCCccccCCCchh-hhhc----cCCc--EEEEccChhhhcccCcccccccc-
Q 014492 236 NDEDLLKILE---------M-PILVVLDEAYTEFSGLESRM-EWVK----KHDN--LIVLRTFSKRAGLAGLRVGYGAF- 297 (423)
Q Consensus 236 ~~~~l~~i~~---------~-~~~li~Deay~~~~~~~~~~-~~~~----~~~~--~i~i~S~SK~~g~~G~R~G~i~~- 297 (423)
+.+++++|++ . |++||+||+|.+|.+.+... .... ..++ +++++||||.||++|+|+||+++
T Consensus 198 ~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~ 277 (418)
T 3rq1_A 198 EDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGI 277 (418)
T ss_dssp CHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEE
T ss_pred CHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCcCCcceEEEEE
Confidence 9999998876 5 89999999999988654321 1111 1344 58899999999999999999999
Q ss_pred --CHHHHHHHHHhcC------CCCCcHHHHHHHHHHhCChH----HH---HHHHHHHHHHHHHHHHHHccCCCCeecCCC
Q 014492 298 --PLSIIEYLWRAKQ------PYNVSVAAEVAACAALQNPI----YL---EKVKEALIKERERLFKLLKDVPFLNPYPSY 362 (423)
Q Consensus 298 --~~~~~~~l~~~~~------~~~~~~~~~~a~~~~l~~~~----~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~ 362 (423)
++++++.+..... ..+++.+++.++..+|++.+ |. ++++++++++++++.+.|+++++....+.+
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 357 (418)
T 3rq1_A 278 SDDEEIADEFFEVNKSTSRATWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQVGLPMLPYRG 357 (418)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCS
T ss_pred eCCHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCc
Confidence 8999988876532 24688999999999998853 32 356678899999999999887543345677
Q ss_pred ceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014492 363 SNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH 421 (423)
Q Consensus 363 ~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~ 421 (423)
++|+|++++ +..++++.|.++||.++++. +++||+++..+ .+++.+++++
T Consensus 358 ~~~~~~~~~---~~~~~~~~l~~~gi~v~~g~-----~~iRis~~~~~-~~~i~~~~~~ 407 (418)
T 3rq1_A 358 GFFITIPTD---SANAICEELKKEHIYVIALA-----NGIRIAACGIP-KCQMTGLAEK 407 (418)
T ss_dssp SSEEEEECT---THHHHHHHHHHTTEECEECS-----SEEEEEGGGSC-HHHHTTHHHH
T ss_pred eEEEEcCCC---CHHHHHHHHHhCCEEEecCC-----CCeEEEEecCC-HHHHHHHHHH
Confidence 888998874 68899998989999999974 78999987311 2344444443
No 56
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=100.00 E-value=1.6e-40 Score=328.24 Aligned_cols=319 Identities=19% Similarity=0.207 Sum_probs=257.6
Q ss_pred CCeeEcCCCCC-----CCCCCHHHHHHHhcCCC--CCCC-CCcchHHHHHHHHHHh-CCC-CC---cEEEeCCHHHHHHH
Q 014492 95 EDIVKIDANEN-----PYGPPPEVREALGQLKF--PYIY-PDPESRRLRAALAKDS-GLE-SD---HILVGCGADELIDL 161 (423)
Q Consensus 95 ~~~i~l~~~~~-----~~~~~~~v~~al~~~~~--~~~Y-~~~g~~~lr~~ia~~~-g~~-~~---~i~~t~G~~~al~~ 161 (423)
.++|+|+.|++ ++++++.+.+++.+... ...| +..|..++|+++++++ +.. ++ +|++|+|+++++..
T Consensus 37 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~~~~~~~~i~~t~g~~~al~~ 116 (413)
T 3t18_A 37 EAVINAALGTLLDDKGKIIALPSVYDRLDEMDRSHIASYAPIEGEKDYRKIVIDTLFGPYKPEGYISAIATPGGTGAIRS 116 (413)
T ss_dssp GGCEECCSCCCBCTTSCBCCCHHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHHH
T ss_pred cceEeccccCccCCCCCcCChHHHHHHHHhcCcccccCcCCCCCCHHHHHHHHHHHhcccCccccCcEEEcCccHHHHHH
Confidence 47899999986 88889999999887432 2467 4458899999999976 332 45 99999999999999
Q ss_pred HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC-CCCCCCCHHHHHHHhhcC---Cce-EEEEcCC-CCCcCcCC
Q 014492 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR-KSDFSLNVELIADAVERE---KPK-CIFLTSP-NNPDGSII 235 (423)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~d~~~l~~~i~~~---~~~-~i~l~~p-~NPtG~~~ 235 (423)
++++++++||+|+++.|+|..|...++..|++++.+|. ++++++|++++++.+.+. +++ ++++++| |||||.++
T Consensus 117 ~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~ 196 (413)
T 3t18_A 117 AIFSYLDEGDPLICHDYYWAPYRKICEEFGRNFKTFEFFTDDFAFNIDVYKEAIDEGIRDSDRIASLINSPGNNPTGYSL 196 (413)
T ss_dssp HHHHHCCSSCEEEEESSCCTHHHHHHHHHTCEEEEECCBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCC
T ss_pred HHHHhcCCCCEEEECCCCcccHHHHHHHhCCeEEEeeccCCCCCcCHHHHHHHHHHHhhcCCCEEEEEeCCCCCCCCCCC
Confidence 99999999999999999999999999999999999996 455799999999999742 677 7888899 99999999
Q ss_pred CHHHHHHHHc---------C-CCEEEEccCCccccCCCchh----hhhc-cCCc--EEEEccChhhhcccCcccccccc-
Q 014492 236 NDEDLLKILE---------M-PILVVLDEAYTEFSGLESRM----EWVK-KHDN--LIVLRTFSKRAGLAGLRVGYGAF- 297 (423)
Q Consensus 236 ~~~~l~~i~~---------~-~~~li~Deay~~~~~~~~~~----~~~~-~~~~--~i~i~S~SK~~g~~G~R~G~i~~- 297 (423)
+.+++.+|++ . |++||+||+|.+|.+.+... .... ..++ +++++||||.||++|+|+||+++
T Consensus 197 ~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~riG~~~~~ 276 (413)
T 3t18_A 197 SDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFFEKFSNLPRNLFVVVAFSMSKSHTAYGLRSGAAVGI 276 (413)
T ss_dssp CHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGGGGGTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEE
T ss_pred CHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHHHHHHhhcCCCeeEEEEEecCccCCCcCcCcEEEEEe
Confidence 9999998876 5 99999999999988654321 1111 1334 48899999999999999999998
Q ss_pred --CHHHHHHHHHhcC------CCCCcHHHHHHHHHHhCChH---H---HHHHHHHHHHHHHHHHHHHccCCCCeecCCCc
Q 014492 298 --PLSIIEYLWRAKQ------PYNVSVAAEVAACAALQNPI---Y---LEKVKEALIKERERLFKLLKDVPFLNPYPSYS 363 (423)
Q Consensus 298 --~~~~~~~l~~~~~------~~~~~~~~~~a~~~~l~~~~---~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~ 363 (423)
++++++.+..... ..+++.+++.++..++++.+ | .++.+++++++++.+.+.|+++++....+.++
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~ 356 (413)
T 3t18_A 277 SSSKEIIEEFEASLAHSARCNWSNGTHAAQNILIELERAENKKIYEQELVDLRNMLKSRADVFVTAAKENKLTMIPYFGG 356 (413)
T ss_dssp ESCHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCBCCCSS
T ss_pred cCCHHHHHHHHHHHHHhhhccccCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccCCCce
Confidence 9999988876532 24588999999999998754 3 44667889999999999999885433456777
Q ss_pred eEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhh---HHHHHHHHhh
Q 014492 364 NFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEH---TDALMECLMH 421 (423)
Q Consensus 364 ~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~---~~~l~~al~~ 421 (423)
+|+|+++. +..++.+.|.++||.++++ ++++||+++...+ .+.|.+++++
T Consensus 357 ~~~~~~~~---~~~~~~~~l~~~gv~v~~g-----~~~iRis~~~~~~~~~l~~l~~~l~~ 409 (413)
T 3t18_A 357 FFTFIPTD---KAFDIVKDLEKENIFTIPS-----AKGIRVAICGVGEEKIPKLVQRLAFY 409 (413)
T ss_dssp SCEEEECS---CHHHHHHHHHHTTEECEEC-----SSEEEECTTTSCGGGHHHHHHHHHHH
T ss_pred EEEEeCCC---CHHHHHHHHHhCCEEEecC-----CCceEEEEeeCCHHHHHHHHHHHHHH
Confidence 88998773 7889999999999999997 4799999874222 3444444443
No 57
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=100.00 E-value=5.7e-40 Score=325.37 Aligned_cols=326 Identities=19% Similarity=0.309 Sum_probs=266.4
Q ss_pred CCCeeEcCCCCCCCCCCHHHHHHHhcC-C-CCCCCCCcchHHHHHHHHHH----hC--CCCCcEEEeCCHHHHHHHHHHH
Q 014492 94 PEDIVKIDANENPYGPPPEVREALGQL-K-FPYIYPDPESRRLRAALAKD----SG--LESDHILVGCGADELIDLIMRC 165 (423)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Y~~~g~~~lr~~ia~~----~g--~~~~~i~~t~G~~~al~~~~~~ 165 (423)
+.++|+|+.++++++++|++.+++.+. . ..+.|+... .+++++++++ ++ +++++|++|+|++++++.+++.
T Consensus 60 g~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~-~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~~~a~~~ 138 (421)
T 3l8a_A 60 NPELLQMWVADMDFLPVPEIKEAIINYGREHIFGYNYFN-DDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQA 138 (421)
T ss_dssp CTTCEECCSSCCCSCCCHHHHHHHHHHHHHCCSSCBCCC-HHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHH
T ss_pred CCCeeecccCCCCCCCCHHHHHHHHHHHhcCCcCCCCCC-HHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHHHHHHHH
Confidence 578999999999999999999999763 2 235665432 5555555555 56 6788999999999999999999
Q ss_pred hcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC---CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHH
Q 014492 166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK 242 (423)
Q Consensus 166 l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~---~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~ 242 (423)
++++||+|+++.|+|..+...++..|.+++.+|.+ .++.+|+++|++++.++++++|++++|+||||.+++.+++++
T Consensus 139 ~~~~gd~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~nptG~~~~~~~l~~ 218 (421)
T 3l8a_A 139 FSEKGDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIK 218 (421)
T ss_dssp HSCTEEEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTTTTBCCCHHHHHH
T ss_pred hcCCCCEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCCCCCcCCHHHHHH
Confidence 99999999999999999999999999999999963 345689999999997578999999999999999999988888
Q ss_pred HHcC----CCEEEEccCCccccCCCc---hhhhhc--cCCcEEEEccChhhhcccCccccccccC-HHHHHHHHHhc---
Q 014492 243 ILEM----PILVVLDEAYTEFSGLES---RMEWVK--KHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAK--- 309 (423)
Q Consensus 243 i~~~----~~~li~Deay~~~~~~~~---~~~~~~--~~~~~i~i~S~SK~~g~~G~R~G~i~~~-~~~~~~l~~~~--- 309 (423)
|++. |+++|+||+|.++.+.+. ....+. ..++++++.|+||.+|++|+|+||++++ +++++.+....
T Consensus 219 l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~~l~~~~~~~~~~~ 298 (421)
T 3l8a_A 219 IAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLRRKFQYRQLAN 298 (421)
T ss_dssp HHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCHHHHHHHHHHHHhc
Confidence 7664 999999999999876442 222222 2478899999999999999999999998 88888877654
Q ss_pred CCCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCC-CCCHHHHHHHHH-h
Q 014492 310 QPYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS-GMDAKKLKDDLA-K 385 (423)
Q Consensus 310 ~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~-~~~~~~l~~~L~-~ 385 (423)
..++.+++++.++.++++. .+|+++.+++++++++++.+.|++++.+.+ .+.+++++|++++. +.+..++.+.|. +
T Consensus 299 ~~~~~n~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~~~~~~~~~~~~v~~~~~~~~~~~l~~~l~~~ 378 (421)
T 3l8a_A 299 NQHEVPTVGMIATQAAFQYGKPWLEELKTVIEGNIKLVIKELEAKTKIKVMEPEGTYLVWLDFSAYAIAQPQLSEKLQNE 378 (421)
T ss_dssp TCSCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSCEEECCSBSSEEEEECGGGTCCTTHHHHHHHHT
T ss_pred ccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEeCCCeeEEEEEeccccCCCHHHHHHHHHHh
Confidence 3357899999999888874 678899999999999999999988755664 45566777899975 567889999997 5
Q ss_pred CCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 386 MGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 386 ~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
+||.+.++..+ ..++++||+++.++ +++.+++++|
T Consensus 379 ~gi~v~~g~~f~~~~~~~iRi~~~~~~--~~i~~~l~~l 415 (421)
T 3l8a_A 379 AKVVLNDGAHFGKEGKYFARLNVATPK--NTVQEALSRI 415 (421)
T ss_dssp TCEECEEGGGGCGGGTTEEEEECCSCH--HHHHHHHHHH
T ss_pred CCEEEECchhhCCCCCCEEEEEecCCH--HHHHHHHHHH
Confidence 79999987653 34689999998643 6677777765
No 58
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=100.00 E-value=3.6e-40 Score=328.15 Aligned_cols=327 Identities=18% Similarity=0.253 Sum_probs=263.2
Q ss_pred CCCeeEcCCCCCCCCCCHHHHHHHhcCCC--C------------CCCCC-cchHHHHHHHHHHhC--------CCCCcEE
Q 014492 94 PEDIVKIDANENPYGPPPEVREALGQLKF--P------------YIYPD-PESRRLRAALAKDSG--------LESDHIL 150 (423)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~~~~--~------------~~Y~~-~g~~~lr~~ia~~~g--------~~~~~i~ 150 (423)
+..+|.|+.+++++. .+.+.+++.+... . .+|++ .|.++||++++++++ +++++|+
T Consensus 37 p~~~i~lg~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~~v~ 115 (435)
T 3piu_A 37 TNGIIQMGLAENQLC-FDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLV 115 (435)
T ss_dssp TTSBEECSSCCCCSS-HHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGGGEE
T ss_pred CCCeEEecccccccc-HHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHhhCCCCCCCHHHEE
Confidence 345799999999887 6777788776321 0 35754 478999999999987 6789999
Q ss_pred EeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHH-HCCCeEEEecCCC--CCCCCHHHHHHHhhc-----CCceEE
Q 014492 151 VGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA-VNGAAVVKVPRKS--DFSLNVELIADAVER-----EKPKCI 222 (423)
Q Consensus 151 ~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~v~~~~--~~~~d~~~l~~~i~~-----~~~~~i 222 (423)
+|+|+++++..++.+++++||.|+++.|+|..+...++ ..|++++.++.+. ++.+|++++++.+.+ .++++|
T Consensus 116 ~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v 195 (435)
T 3piu_A 116 LTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGV 195 (435)
T ss_dssp EEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred EcCChHHHHHHHHHHhcCCCCeEEECCCccccHHHHHHHhcCCEEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEE
Confidence 99999999999999999999999999999999888777 6899999999653 567999999999874 378999
Q ss_pred EEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc----hhhhhcc---------CCcEEEEccChhhh
Q 014492 223 FLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES----RMEWVKK---------HDNLIVLRTFSKRA 285 (423)
Q Consensus 223 ~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~----~~~~~~~---------~~~~i~i~S~SK~~ 285 (423)
++++|+||||.+++.+++++|++. |+++|+||+|..+.+.+. ....... .+++++++|+||.|
T Consensus 196 ~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~ 275 (435)
T 3piu_A 196 LVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDL 275 (435)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSS
T ss_pred EEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEeeeccc
Confidence 999999999999999888887664 999999999998665432 1122222 67889999999999
Q ss_pred cccCcccccccc-CHHHHHHHHHhcCCCCCcHHHHHHHHHHhCChH----HHHHHHHHHHHHHHHHHHHHccCCCCeecC
Q 014492 286 GLAGLRVGYGAF-PLSIIEYLWRAKQPYNVSVAAEVAACAALQNPI----YLEKVKEALIKERERLFKLLKDVPFLNPYP 360 (423)
Q Consensus 286 g~~G~R~G~i~~-~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~----~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p 360 (423)
|++|+|+||+++ ++++.+.+.+....+..+++.+.++.+++++.+ ++++.+++++++++++.+.|+++++....+
T Consensus 276 g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 355 (435)
T 3piu_A 276 GLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNG 355 (435)
T ss_dssp CCGGGCEEEEEESCHHHHHHHHHHGGGSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEECCC
T ss_pred CCCceeEEEEEeCCHHHHHHHHHHhhcCCCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCC
Confidence 999999999999 567888887777778889999999999998865 456778889999999999999885333345
Q ss_pred CCceEEEEEeCCCC------CHHHHHHHHHhC-CcEEEeCCC--CCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 361 SYSNFILCEVTSGM------DAKKLKDDLAKM-GVMIRHYNN--KELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 361 ~~~~~~~~~~~~~~------~~~~l~~~L~~~-gI~v~~~~~--~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.+++|+|++++... +..++.+.|.++ ||.+.++.. ...++++||+++.. +.+++.+++++|
T Consensus 356 ~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~-~~e~i~~~l~~l 425 (435)
T 3piu_A 356 NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANL-PERTLDLAMQRL 425 (435)
T ss_dssp CSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSSS-CHHHHHHHHHHH
T ss_pred CeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEeeCC-CHHHHHHHHHHH
Confidence 56699999997433 456788888755 999998765 34578999999763 235566666554
No 59
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=100.00 E-value=2.7e-40 Score=328.23 Aligned_cols=323 Identities=15% Similarity=0.162 Sum_probs=258.8
Q ss_pred CeeEcCCCCCCCCC---CHHHHHHH--hcC-C----CCCCCCC-cchHHHHHHHHHHhCCCCCcEEEeCCHHHHH--HHH
Q 014492 96 DIVKIDANENPYGP---PPEVREAL--GQL-K----FPYIYPD-PESRRLRAALAKDSGLESDHILVGCGADELI--DLI 162 (423)
Q Consensus 96 ~~i~l~~~~~~~~~---~~~v~~al--~~~-~----~~~~Y~~-~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al--~~~ 162 (423)
..|+|..|.++... ++.+.+++ .+. . ....|++ .|..+||+++++++++++++|++|+|+++++ +++
T Consensus 34 ~~i~~~~G~p~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~ 113 (427)
T 3ppl_A 34 LKLDLTRGKPSSEQLDFADELLALPGKGDFKAADGTDVRNYGGLDGIVDIRQIWADLLGVPVEQVLAGDASSLNIMFDVI 113 (427)
T ss_dssp CCEECCCCSCCHHHHHTTGGGGGCSCTTCCBCTTSCBTTSSCCSSCCHHHHHHHHHHHTSCGGGEEECSSCHHHHHHHHH
T ss_pred ceEecCCCCCChHHCCCcHHHHHHhhhHHHhhccchhhcCCCCCCCcHHHHHHHHHHhCCCcceEEEeCCcHHHHHHHHH
Confidence 46999998876532 23465665 432 1 1367866 4889999999999999999999999999999 588
Q ss_pred HHHhcC--C----------CCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEc-CCCC
Q 014492 163 MRCVLD--P----------GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNN 229 (423)
Q Consensus 163 ~~~l~~--~----------gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~-~p~N 229 (423)
++++++ | ||+|+++.|+|..+...++..|++++.+|.+++ ++|++++++++...++++|+++ +|||
T Consensus 114 ~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~~~g~~~~~v~~~~~-g~d~~~l~~~l~~~~~~~v~~~p~~~N 192 (427)
T 3ppl_A 114 SWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFSITERFGFEMISVPMNED-GPDMDAVEELVKNPQVKGMWVVPVFSN 192 (427)
T ss_dssp HHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHTTCEEEEEEEETT-EECHHHHHHHTTSTTEEEEEECCSSCT
T ss_pred HHHHhccCCcccccccCCCCCEEEEcCCCcHHHHHHHHHcCCEEEEeCCCCC-CCCHHHHHHHHhcCCCeEEEECCCCCC
Confidence 888877 6 899999999999999999999999999997654 5999999999965689999876 8899
Q ss_pred CcCcCCCHHHHHHHHc----C-CCEEEEccCCccccCCCc---h--hhhh----ccCCcEEEEccChhhhcccCcccccc
Q 014492 230 PDGSIINDEDLLKILE----M-PILVVLDEAYTEFSGLES---R--MEWV----KKHDNLIVLRTFSKRAGLAGLRVGYG 295 (423)
Q Consensus 230 PtG~~~~~~~l~~i~~----~-~~~li~Deay~~~~~~~~---~--~~~~----~~~~~~i~i~S~SK~~g~~G~R~G~i 295 (423)
|||.+++.+++++|++ . |++||+||+|.++.+.+. . ...+ +..+++++++||||. +++|+|+||+
T Consensus 193 PtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~G~r~G~~ 271 (427)
T 3ppl_A 193 PTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKI-TLAGAGVSFF 271 (427)
T ss_dssp TTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTT-SCTTSSCEEE
T ss_pred CCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhc-cCcCccEEEE
Confidence 9999999996666654 3 999999999998654332 1 1111 256889999999998 7799999999
Q ss_pred ccCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhCC-h---HHHHHHHHHHHHHHHHHHHHHcc----CCCCe-ecCCCce
Q 014492 296 AFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQN-P---IYLEKVKEALIKERERLFKLLKD----VPFLN-PYPSYSN 364 (423)
Q Consensus 296 ~~~~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~-~---~~~~~~~~~~~~~~~~l~~~L~~----~~~~~-~~p~~~~ 364 (423)
++++++++.+..... .++.+.+.|.++..++++ . +++++.++.++++++.+.+.|.+ ++.+. ..|++++
T Consensus 272 ~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~ 351 (427)
T 3ppl_A 272 LTSAENRKWYTGHAGIRGIGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAGGY 351 (427)
T ss_dssp ECCHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECCCSBSS
T ss_pred EcCHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeCCCccE
Confidence 999999998887654 477899999999999998 3 56778888888888888888754 33344 3678899
Q ss_pred EEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC-C-----CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 365 FILCEVTSGMDAKKLKDDLAKMGVMIRHYNN-K-----ELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 365 ~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~-~-----~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
|+|++++++ +..++.+.|.++||.+++++. + ..++++||+++.. +.+++.+++++|
T Consensus 352 ~~~~~~~~~-~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~~~-~~~~i~~~~~~l 413 (427)
T 3ppl_A 352 FISLDVVPG-TASRVAELAKEAGIALTGAGSSYPLRQDPENKNLRLAPSLP-PVEELEVAMDGV 413 (427)
T ss_dssp CEEEECSTT-CHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSS-CHHHHHHHHHHH
T ss_pred EEEEECCcc-hHHHHHHHHHHCCCEEecCcCcCCCCCCCCCCeEEEECCCC-CHHHHHHHHHHH
Confidence 999999855 788899999999999999443 2 2578999999864 236677666654
No 60
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=100.00 E-value=1.3e-39 Score=317.44 Aligned_cols=306 Identities=22% Similarity=0.303 Sum_probs=252.9
Q ss_pred HHHHHHHhcCCCCCCC-CCcchHHHHHHHHHHh-CCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHH
Q 014492 111 PEVREALGQLKFPYIY-PDPESRRLRAALAKDS-GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA 188 (423)
Q Consensus 111 ~~v~~al~~~~~~~~Y-~~~g~~~lr~~ia~~~-g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~ 188 (423)
+++.+++.... ..| +..+..++|+++++++ ++++++|++|+|+++++..++.+++++||+|+++.|+|..+...++
T Consensus 46 ~~~~~~~~~~~--~~y~~~~g~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~ 123 (375)
T 3op7_A 46 EDFYKKLQGTK--LNYGWIEGSPAFKKSVSQLYTGVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYDIPK 123 (375)
T ss_dssp HHHHHHHHTSC--CSSCCTTCCHHHHHHHHTTSSSCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHHHHH
T ss_pred HHHHHHHhcCC--cCCCCCCChHHHHHHHHHHhccCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHH
Confidence 34555554422 345 5567899999999998 5788999999999999999999999999999999999999999999
Q ss_pred HCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHH---HHHcC-CCEEEEccCCccccCC
Q 014492 189 VNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL---KILEM-PILVVLDEAYTEFSGL 262 (423)
Q Consensus 189 ~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~---~i~~~-~~~li~Deay~~~~~~ 262 (423)
..|++++.+|.+ .++.+|+++++++++ +++++|++++|+||||.+++.++++ ++|+. |+++|+||+|.++...
T Consensus 124 ~~g~~~~~v~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~ 202 (375)
T 3op7_A 124 SLGAEVDLWQIEEENGWLPDLEKLRQLIR-PTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSEL 202 (375)
T ss_dssp HTTCEEEEEEEEGGGTTEECHHHHHHHCC-TTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSS
T ss_pred HcCCEEEEEeccccCCCCCCHHHHHHhhc-cCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccc
Confidence 999999999964 456689999999997 6899999999999999999955555 45555 9999999999988765
Q ss_pred CchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCC-hHHHHHHHHHH
Q 014492 263 ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQN-PIYLEKVKEAL 339 (423)
Q Consensus 263 ~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~-~~~~~~~~~~~ 339 (423)
+ .....+..+++++++||||.+|++|+|+||+++++++++.+...... ++.+.+.+.++..+++. .+++++.++++
T Consensus 203 ~-~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 281 (375)
T 3op7_A 203 D-VPSIIEVYDKGIAVNSLSKTYSLPGIRIGWVAANHQVTDILRDYRDYTMICAGVFDDLVAQLALAHYQEILERNRHIL 281 (375)
T ss_dssp C-CCCHHHHCTTEEEEEESSSSSSCGGGCCEEEECCHHHHHHHTTTGGGTTSCCCHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred C-CCchhhhcCCEEEEeEChhhcCCcccceEEEEeCHHHHHHHHHHHhhhccCCCcHHHHHHHHHHhccHHHHHHHHHHH
Confidence 2 22223346788999999999999999999999999999998776553 56788999988888887 45778889999
Q ss_pred HHHHHHHHHHHccCCCCee-cCCCceEEEEEeCCCCCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHH
Q 014492 340 IKERERLFKLLKDVPFLNP-YPSYSNFILCEVTSGMDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALME 417 (423)
Q Consensus 340 ~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~~~~~~~l~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~ 417 (423)
+++++.+.+.|++.+++.. .|.+++++|+.++.+.+..++++.|. ++||.++++..+..++++||+++..+ +++.+
T Consensus 282 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~--~~i~~ 359 (375)
T 3op7_A 282 EENLAILDQWIEEEPLVSYIRPAVVSTSFVKIAVDMPMEDFCLQLLQEHGVLLVPGNRFERDGYVRLGFACEQ--ETLIK 359 (375)
T ss_dssp HHHHHHHHHHHHHCTTEEECCCSSSSCEEEEECCSSCHHHHHHHHHHHHCEECEEGGGGTCTTEEEECCCSCH--HHHHH
T ss_pred HHHHHHHHHHHhhCCCceEecCCCeEEEeEEcCCCCCHHHHHHHHHHhCCEEEeChhhhCCCCeEEEEecCCH--HHHHH
Confidence 9999999999998766654 46778889999887778899998885 89999999877666899999998754 55666
Q ss_pred HHhhh
Q 014492 418 CLMHL 422 (423)
Q Consensus 418 al~~l 422 (423)
++++|
T Consensus 360 ~l~~l 364 (375)
T 3op7_A 360 GLEKL 364 (375)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66554
No 61
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=100.00 E-value=3.7e-40 Score=324.46 Aligned_cols=317 Identities=22% Similarity=0.312 Sum_probs=249.5
Q ss_pred CCCeeEcCCCCCCCCCCHHHHHHHhcC----C---CCCCC-CCcchHHHHHHHHHH--hC-CCCCcEEEeCCHHHHHHHH
Q 014492 94 PEDIVKIDANENPYGPPPEVREALGQL----K---FPYIY-PDPESRRLRAALAKD--SG-LESDHILVGCGADELIDLI 162 (423)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~~----~---~~~~Y-~~~g~~~lr~~ia~~--~g-~~~~~i~~t~G~~~al~~~ 162 (423)
+.++|+|+.|+++++++|.+.+++.+. . ...+| +..+..++|++++++ +| +++++|++|+|+++++..+
T Consensus 32 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~g~~~~~~v~~~~G~~~al~~~ 111 (400)
T 3asa_A 32 QHTVINLSIGDTTQPLNASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQKLSEDFYRGFVDAKEIFISDGAKVDLFRL 111 (400)
T ss_dssp TSCCEECSSCCCCCCCCHHHHHHHHHHHHHHTSSSCCCCCCCTTCCHHHHHHHHHTTSTTSSCGGGEEEESCHHHHHHHH
T ss_pred CCceEeccCCCCCCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHcCCCCHHHEEEccChHHHHHHH
Confidence 567899999999998999988888652 1 12568 456789999999999 58 7889999999999999997
Q ss_pred HHHhcCCCCeEEEcCCCchhhHHHHHHCCCe-EEEecCCC--CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHH
Q 014492 163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAA-VVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239 (423)
Q Consensus 163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~-~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~ 239 (423)
+. ++++||+|+++.|+|..+...++..|.+ ++.+|.++ ++..|+++ + .++++|++++||||||.+++.++
T Consensus 112 ~~-~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~----~--~~~~~v~l~~p~nptG~~~~~~~ 184 (400)
T 3asa_A 112 LS-FFGPNQTVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAFFPEFPE----D--THIDILCLCSPNNPTGTVLNKDQ 184 (400)
T ss_dssp HH-HHCSSCEEEEEESCCHHHHHHHHHTTCSEEEEEECCGGGTTCCCCCT----T--CCCSEEEEESSCTTTCCCCCHHH
T ss_pred HH-HcCCCCEEEECCCCcHHHHHHHHHcCCcceEecccchhcCcccChhh----c--cCccEEEEeCCCCCCCCcCCHHH
Confidence 65 5689999999999999999999999999 99998653 23344321 1 57899999999999999999988
Q ss_pred HHHHHcC----CCEEEEccCCccccCCCc---hhhhhc-cCCcEEEEccChhhhcccCccccccccCHHH-------HHH
Q 014492 240 LLKILEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI-------IEY 304 (423)
Q Consensus 240 l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~-------~~~ 304 (423)
+++|++. |+++|+||+|.++.+++. ....++ ..+++++++|+||.||++|+|+||+++++++ ++.
T Consensus 185 l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~~~~~~~~~~~~~~ 264 (400)
T 3asa_A 185 LRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQELTYADGHFVIQ 264 (400)
T ss_dssp HHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEEEECCTTCBCTTSCBHHH
T ss_pred HHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhcCCcchheeEEeeChhhccchhhhHHH
Confidence 8777653 999999999998875432 222222 1457899999999999999999999999887 565
Q ss_pred HHHhc--CC-CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEE-eCCCCCHHHH
Q 014492 305 LWRAK--QP-YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCE-VTSGMDAKKL 379 (423)
Q Consensus 305 l~~~~--~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~-~~~~~~~~~l 379 (423)
+.... .. ++.+.++|.++..+|++. ++++.+++++++++++.+.|++++ +.+ .+.+++|+|++ ++++.+..++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (400)
T 3asa_A 265 DWERFLSTTFNGASIPAQEAGVAGLSIL-PQLEAIHYYRENSDLLRKALLATG-FEVFGGEHAPYLWVKPTQANISDRDL 342 (400)
T ss_dssp HHHHHHHHHCCCCCHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHHHHHHHTT-CEEEECSSSSEEEEECCCTTCCTTTH
T ss_pred HHHHHhccCccCCChHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHCC-CeeeCCCCceEEEEeccCCCCCHHHH
Confidence 54321 22 368999999999888765 678889999999999999998875 444 45678999999 8766677788
Q ss_pred HHHHH-hCCcEEEeCCCC--CCCCeEEEEe-cChhhHHHHHHHHhhh
Q 014492 380 KDDLA-KMGVMIRHYNNK--ELKGYVRVSV-GKPEHTDALMECLMHL 422 (423)
Q Consensus 380 ~~~L~-~~gI~v~~~~~~--~~~~~iRis~-~~~~~~~~l~~al~~l 422 (423)
.+.|. ++||.+.++..+ ..++++||++ .+.+ ++.+++++|
T Consensus 343 ~~~l~~~~gv~v~~g~~f~~~~~~~iRis~~~~~e---~i~~~l~~l 386 (400)
T 3asa_A 343 FDFFLREYHIAITPGIGFGRSGSGFVRFSSLGKRE---DILAACERL 386 (400)
T ss_dssp HHHHHHHHSEECEEGGGGCGGGTTCEEEECCSCHH---HHHHHHHHH
T ss_pred HHHHHHhCCEEEeChhHhCCCCCCEEEEEeeCCHH---HHHHHHHHH
Confidence 88887 569999987653 2468999995 3444 455555543
No 62
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=100.00 E-value=2.1e-39 Score=321.23 Aligned_cols=316 Identities=18% Similarity=0.187 Sum_probs=250.0
Q ss_pred CCCeeEcCCC---CCCCCCC--HHHHHHHhcC-C--CCCCCC-CcchHHHHHHHHHHhCC------CCC--cEEEeCCHH
Q 014492 94 PEDIVKIDAN---ENPYGPP--PEVREALGQL-K--FPYIYP-DPESRRLRAALAKDSGL------ESD--HILVGCGAD 156 (423)
Q Consensus 94 ~~~~i~l~~~---~~~~~~~--~~v~~al~~~-~--~~~~Y~-~~g~~~lr~~ia~~~g~------~~~--~i~~t~G~~ 156 (423)
..++|+|+.| +++..++ +.+.+++.+. . ..+.|+ ..|..++|+++++++.. +++ +|++|+|++
T Consensus 48 ~~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~t 127 (420)
T 4f4e_A 48 RPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGLPRGYLPIDGIAAYDASVQKLLLGDDSPLIAAGRVVTAQALGGT 127 (420)
T ss_dssp CSSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHH
T ss_pred CCCcEEeeeeeeECCCCCccCcHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHhcCCCccccccCceEEEECCccH
Confidence 3578999999 5555444 8999888762 2 235784 45889999999999732 567 899999999
Q ss_pred HHHHHHH--HHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC--CCCCCCCHHHHHHHhhc--CCceEEEEcCCCCC
Q 014492 157 ELIDLIM--RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER--EKPKCIFLTSPNNP 230 (423)
Q Consensus 157 ~al~~~~--~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~NP 230 (423)
+++..++ ..++++||+|+++.|+|..+...++..|++++.+|. ++++.+|++++++.+++ .+++++++++||||
T Consensus 128 ~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NP 207 (420)
T 4f4e_A 128 GALKIGADFLRTLNPKAKVAISDPSWENHRALFDMAGFEVVAYPYYDAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNP 207 (420)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHTTCCEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTT
T ss_pred HHHHHHHHHHHHhCCCCEEEEeCCCcHhHHHHHHHcCCeEEEeeeeccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCC
Confidence 9999994 456899999999999999999999999999999997 45788999999999964 46789999999999
Q ss_pred cCcCCCHHHHHHHHcC----CCEEEEccCCccccCCC----chh-hhhccCCcEEEEccChhhhcccCcccccccc---C
Q 014492 231 DGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE----SRM-EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF---P 298 (423)
Q Consensus 231 tG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~----~~~-~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~---~ 298 (423)
||.+++.+++++|++. |+++|+||+|.++.++. ... ......+++++++||||.||++|+|+||+++ +
T Consensus 208 tG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~~ 287 (420)
T 4f4e_A 208 TGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANLNVFVSSSFSKSFSLYGERVGALSIITDS 287 (420)
T ss_dssp TCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCEEEEEEECSS
T ss_pred CCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcCCCEEEEEeCCccCcCcCCCcEEEEEEcCC
Confidence 9999999988888764 99999999999998753 112 2223578999999999999999999999863 5
Q ss_pred HHHHHHH----HHhc--CCCCCcHHHHHHHHHHhCCh-------HHHHHHHHHHHHHHHHHHHHHccC---CCCe-ecCC
Q 014492 299 LSIIEYL----WRAK--QPYNVSVAAEVAACAALQNP-------IYLEKVKEALIKERERLFKLLKDV---PFLN-PYPS 361 (423)
Q Consensus 299 ~~~~~~l----~~~~--~~~~~~~~~~~a~~~~l~~~-------~~~~~~~~~~~~~~~~l~~~L~~~---~~~~-~~p~ 361 (423)
+++++.+ .... ...+.+.+++.++..++.+. +++++++++++++++.+.+.|+++ +++. ..|.
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~ 367 (420)
T 4f4e_A 288 KDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLKAAGIERDFSFINAQ 367 (420)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHS
T ss_pred HHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeECCC
Confidence 6655443 2221 23456788888888888873 457888999999999999999987 2333 4577
Q ss_pred CceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhh
Q 014492 362 YSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG--KPEHTDALMECLMH 421 (423)
Q Consensus 362 ~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~ 421 (423)
+++|+|+.+ +.+.+.+.|.++||.+.++. ||+++ +.++++++.++|++
T Consensus 368 ~g~~~~~~~----~~~~~~~~l~~~gI~v~~~~--------Ris~~~~~~~~i~~~~~~l~~ 417 (420)
T 4f4e_A 368 RGMFSYSGL----TSAQVDRLREEFGIYAVSTG--------RICVAALNTRNLDVVANAIAA 417 (420)
T ss_dssp CSSEEECCC----CHHHHHHHHHHHCEECCTTS--------EEEGGGCCTTTHHHHHHHHHH
T ss_pred ccEEEEeCC----CHHHHHHHHHhCCEEecCCC--------eEEEecCCHHHHHHHHHHHHH
Confidence 899999876 35666677778999999864 99998 45556666666654
No 63
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=100.00 E-value=4.9e-39 Score=315.77 Aligned_cols=327 Identities=15% Similarity=0.135 Sum_probs=253.1
Q ss_pred hHHHHHHhCC-CCCCeeEcCCC---CCCCCCC--HHHHHHHhc-C-C--CCCCCCC-cchHHHHHHHHHHhCC------C
Q 014492 83 FEVLSIQLGR-KPEDIVKIDAN---ENPYGPP--PEVREALGQ-L-K--FPYIYPD-PESRRLRAALAKDSGL------E 145 (423)
Q Consensus 83 ~~~~~~~~~~-~~~~~i~l~~~---~~~~~~~--~~v~~al~~-~-~--~~~~Y~~-~g~~~lr~~ia~~~g~------~ 145 (423)
+..+...+.. ...++|+|+.| +++..++ +.+.+++.+ . . ..+.|+. .|..++|++++++++. +
T Consensus 13 ~~~~~~~~~~~~~~~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~ 92 (397)
T 3fsl_A 13 ILTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGADHPVLK 92 (397)
T ss_dssp HHHHHHHHHTCCCSCCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHSCCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHH
T ss_pred hhhHHHHHhcCCCCCeEEEeeeEEECCCCCccCcHHHHHHHHhhccCccccccCCCCCchHHHHHHHHHHHhcCCccccc
Confidence 3334443332 34578999999 4554444 899988876 3 2 2356855 5889999999999842 6
Q ss_pred CC--cEEEeCCHHHHHHHHH--HHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC--CCCCCCCHHHHHHHhhc--C
Q 014492 146 SD--HILVGCGADELIDLIM--RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER--E 217 (423)
Q Consensus 146 ~~--~i~~t~G~~~al~~~~--~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~--~ 217 (423)
++ +|++|+|+++++..++ ..++++||+|+++.|+|..+...++..|++++.+|. ++++.+|++++++.+.+ .
T Consensus 93 ~~~~~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 172 (397)
T 3fsl_A 93 QQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLQA 172 (397)
T ss_dssp TTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHHTTCCEEEECCEETTTTEECHHHHHHHHTTCCT
T ss_pred ccceEEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHHcCCceEEEeeeeccCCcCcHHHHHHHHHhCCC
Confidence 77 8999999999999995 456799999999999999999999999999999997 45788999999999974 4
Q ss_pred CceEEEEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCC--c--hh-hhhccCCcEEEEccChhhhccc
Q 014492 218 KPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE--S--RM-EWVKKHDNLIVLRTFSKRAGLA 288 (423)
Q Consensus 218 ~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~--~--~~-~~~~~~~~~i~i~S~SK~~g~~ 288 (423)
+++++++++||||||.+++.+++++|++. |+++|+||+|.++.++. . .. ......+++++++||||.+|++
T Consensus 173 ~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 252 (397)
T 3fsl_A 173 GSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLY 252 (397)
T ss_dssp TCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCG
T ss_pred CCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEecccccccCc
Confidence 67888889999999999999988877663 99999999999998752 1 12 2224578999999999999999
Q ss_pred Ccccccccc---CHHHHHHHHHh-----cCC-CCCcHHHHHHHHHHhCC-------hHHHHHHHHHHHHHHHHHHHHHcc
Q 014492 289 GLRVGYGAF---PLSIIEYLWRA-----KQP-YNVSVAAEVAACAALQN-------PIYLEKVKEALIKERERLFKLLKD 352 (423)
Q Consensus 289 G~R~G~i~~---~~~~~~~l~~~-----~~~-~~~~~~~~~a~~~~l~~-------~~~~~~~~~~~~~~~~~l~~~L~~ 352 (423)
|+|+||+++ +++.++.+... ... .+++.+++.++..++.+ .+++++.+++++++++++.+.|++
T Consensus 253 G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 332 (397)
T 3fsl_A 253 GERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAMRQELVKVLST 332 (397)
T ss_dssp GGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCeeEEEEecCCHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999974 45666544322 123 45678889988888887 356788899999999999999988
Q ss_pred CC---CCe-ecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC--hhhHHHHHHHHhh
Q 014492 353 VP---FLN-PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK--PEHTDALMECLMH 421 (423)
Q Consensus 353 ~~---~~~-~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~--~~~~~~l~~al~~ 421 (423)
++ ++. ..|.+++|+|++++ .+.+.+.|.++||.+++++ ||+++. .++++++.++|++
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~gi~v~~g~--------Ris~~~~~~~~i~~~~~~l~~ 395 (397)
T 3fsl_A 333 EMPERNFDYLLNQRGMFSYTGLS----AAQVDRLREEFGVYLIASG--------RMCVAGLNTANVQRVAKAFAA 395 (397)
T ss_dssp HCTTSCCTHHHHCCSSEEECCCC----HHHHHHHHHTTCEECCTTC--------EEEGGGCCTTTHHHHHHHHHH
T ss_pred cCCCCCceeecCCceEEEecCCC----HHHHHHHHHhCCEEECCCC--------eEEEEecCHhhHHHHHHHHHh
Confidence 63 333 35678899998763 5666777779999999875 999874 4445555555544
No 64
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=100.00 E-value=1.7e-39 Score=321.96 Aligned_cols=323 Identities=15% Similarity=0.155 Sum_probs=257.7
Q ss_pred CeeEcCCCCCC---CCCCHHHHHHHh--cC-CC---CCCC-CC-cchHHHHHHHHHHhCCCCCcEEEeCCHHHHHH--HH
Q 014492 96 DIVKIDANENP---YGPPPEVREALG--QL-KF---PYIY-PD-PESRRLRAALAKDSGLESDHILVGCGADELID--LI 162 (423)
Q Consensus 96 ~~i~l~~~~~~---~~~~~~v~~al~--~~-~~---~~~Y-~~-~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~--~~ 162 (423)
+.|+|+.|.++ ++.++.+.+++. +. .. ...| ++ .|.++||+++++++++++++|++|+|+++++. ++
T Consensus 26 ~~i~l~~g~p~~~~~~~~~~v~~a~~~~~~~~~~~~~~~Yp~~~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~ 105 (423)
T 3ez1_A 26 LNLNMQRGQPADADFDLSNGLLTVLGAEDVRMDGLDLRNYPGGVAGLPSARALFAGYLDVKAENVLVWNNSSLELQGLVL 105 (423)
T ss_dssp CCEESCCCCCCHHHHHTTGGGGGSCCGGGCEETTEETTSSCSCTTCCHHHHHHHHHHTTSCGGGEEECSSCHHHHHHHHH
T ss_pred ceEecCCCCCChHhCCCcHHHHHHHhhhHHhhcchhhhCCCCCCCChHHHHHHHHHHhCCChhhEEEeCCcHHHHHHHHH
Confidence 35999999988 777778888885 32 21 2568 44 47899999999999999999999999999998 88
Q ss_pred HHHhcC--C---------CCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhh-cCCceEEEEc-CCCC
Q 014492 163 MRCVLD--P---------GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE-REKPKCIFLT-SPNN 229 (423)
Q Consensus 163 ~~~l~~--~---------gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~~i~l~-~p~N 229 (423)
+++++. + ||+|+++.|+|..+...++..|++++.+|.+++ ++|++++++++. ..++++|+++ +|||
T Consensus 106 ~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-g~d~~~l~~~l~~~~~~~~v~~~~~~~N 184 (423)
T 3ez1_A 106 TFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLTVDMQSD-GPDVDAVERLAGTDPSVKGILFVPTYSN 184 (423)
T ss_dssp HHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT-EECHHHHHHHHHSCTTEEEEEECSSSCT
T ss_pred HHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccCCCC-CCCHHHHHHHHhhCCCceEEEECCCCCC
Confidence 888888 8 599999999999999999999999999997654 699999999995 4689999865 8999
Q ss_pred CcCcCCCHHHHHHHHc----C-CCEEEEccCCccccCCC-------chhhh---hccCCcEEEEccChhhhcccCccccc
Q 014492 230 PDGSIINDEDLLKILE----M-PILVVLDEAYTEFSGLE-------SRMEW---VKKHDNLIVLRTFSKRAGLAGLRVGY 294 (423)
Q Consensus 230 PtG~~~~~~~l~~i~~----~-~~~li~Deay~~~~~~~-------~~~~~---~~~~~~~i~i~S~SK~~g~~G~R~G~ 294 (423)
|||.+++.+++++|++ . |++||+||+|..+.+.. +.... .+..+++++++||||. +++|+|+||
T Consensus 185 PtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~-~~~G~r~G~ 263 (423)
T 3ez1_A 185 PGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKI-TFAGAGLGF 263 (423)
T ss_dssp TTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTT-SCSSSSCEE
T ss_pred CCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhh-ccCCcceEE
Confidence 9999999997777654 3 99999999999643222 11111 1356899999999998 679999999
Q ss_pred cccCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhCC--h---HHHHHHHHHHHHHHHHHHHHHcc----CC-CCe-ecCC
Q 014492 295 GAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQN--P---IYLEKVKEALIKERERLFKLLKD----VP-FLN-PYPS 361 (423)
Q Consensus 295 i~~~~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~--~---~~~~~~~~~~~~~~~~l~~~L~~----~~-~~~-~~p~ 361 (423)
+++++++++.+..... .++.+.+.|.++..++++ . +++++.++.++++++.+.+.|.+ ++ .+. ..|+
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~p~ 343 (423)
T 3ez1_A 264 VASSEDNIRWLSKYLGAQSIGPNKVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWTLPK 343 (423)
T ss_dssp EEECHHHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSEEECCCS
T ss_pred EEeCHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCceEEeCCC
Confidence 9999999998887653 467899999999988876 3 56677777888888777776654 44 334 3578
Q ss_pred CceEEEEEeCCCCCHHHHHHHHHhCCcEEEe-CCCC-----CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 362 YSNFILCEVTSGMDAKKLKDDLAKMGVMIRH-YNNK-----ELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 362 ~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~-~~~~-----~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
+++|+|++++++ +.+.+.+.|.++||.+++ +..+ ..++++||+++.. +.+++.+++++|
T Consensus 344 ~g~~~~~~~~~~-~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~iRis~~~~-~~~~i~~~~~~l 408 (423)
T 3ez1_A 344 GGYFISLDTAEP-VADRVVKLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTRP-PVEEVRTAMQVV 408 (423)
T ss_dssp BSSCEEEEESSS-CHHHHHHHHHHTTEECCCTTTTSSTTCCSSSCEEEECCSSS-CHHHHHHHHHHH
T ss_pred ccEEEEEECCCC-cHHHHHHHHHHCCcEEecCcccccCCCCCCCCeEEEEcCCC-CHHHHHHHHHHH
Confidence 899999999855 788899999999999999 4332 2468999999853 235566666554
No 65
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=100.00 E-value=3.1e-40 Score=324.11 Aligned_cols=306 Identities=22% Similarity=0.258 Sum_probs=239.8
Q ss_pred CCCCeeEcCCCCCCCCCCHHHHHHHhcC---C---CCCCCCCc-ch-----HHHHHHHHHHhC-----CCC-CcEEEeCC
Q 014492 93 KPEDIVKIDANENPYGPPPEVREALGQL---K---FPYIYPDP-ES-----RRLRAALAKDSG-----LES-DHILVGCG 154 (423)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~---~---~~~~Y~~~-g~-----~~lr~~ia~~~g-----~~~-~~i~~t~G 154 (423)
.+.++|+|+.+++++++++.+.+++.+. . ...+|++. |. ++||++++++++ +.+ ++|++|+|
T Consensus 20 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~i~~t~G 99 (391)
T 3bwn_A 20 MSDFVVNLDHGDPTAYEEYWRKMGDRCTVTIRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHGVVGNAATEDRYIVVGTG 99 (391)
T ss_dssp TTTSCEECSSCCCGGGHHHHHHTGGGSCEEECTTTTCSSCSCTTSSSTTSCHHHHHHHHHHHHHHCSBCCSSSEEEEEEH
T ss_pred CCCCeeEcCCCCCCCCCCHHHHHhHHHHhhcCccchhhcCCCCCCcccccCHHHHHHHHHHHHhcCCCCCCCCeEEEeCC
Confidence 3467899999999987767777776431 1 22568654 66 999999999986 235 69999999
Q ss_pred HHHHHHHHHHHhcCCCC----eEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCC
Q 014492 155 ADELIDLIMRCVLDPGD----KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNP 230 (423)
Q Consensus 155 ~~~al~~~~~~l~~~gd----~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NP 230 (423)
+++++.+++++++++|| +|++++|+|..|...++..|++++.++.+.+ +++ ..++|+|++++||||
T Consensus 100 ~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~-~l~---------~~~~k~v~l~~p~NP 169 (391)
T 3bwn_A 100 STQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEETTYVRSGMYKWEGDAW-GFD---------KKGPYIELVTSPNNP 169 (391)
T ss_dssp HHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHHHHHTTCBTTEEEEEEST-TCC---------CCSCEEEEEESSCTT
T ss_pred hHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHHHHHHcCCeEEEecCCHH-HcC---------CCCCEEEEECCCCCC
Confidence 99999999999999999 9999999999999999999999998886432 222 257899999999999
Q ss_pred cCcCCCHHHHHHHHcC--C--CEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCcccccccc-CHHHHHHH
Q 014492 231 DGSIINDEDLLKILEM--P--ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYL 305 (423)
Q Consensus 231 tG~~~~~~~l~~i~~~--~--~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~-~~~~~~~l 305 (423)
||.+++ + |++. + ++||+||+|.+ ....... ...+++++++||||.||++|+|+||+++ ++++++.+
T Consensus 170 tG~~~~--~---l~~~~~~~~~~ii~De~y~~--~~~~~l~--~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~~l 240 (391)
T 3bwn_A 170 DGTIRE--T---VVNRPDDDEAKVIHDFAYYW--PHYTPIT--RRQDHDIMLFTFSKITGHAGSRIGWALVKDKEVAKKM 240 (391)
T ss_dssp TCCCCC--C---CC-----CCCEEEEECTTCS--TTTSCCC--CCBCCSEEEEEHHHHHSCGGGCEEEEEECCHHHHHHH
T ss_pred CchhHH--H---HHHHhhcCCCEEEEeCCCCC--CCCCccc--cCCCCeEEEEechhhcCCCccceEEEEecCHHHHHHH
Confidence 999997 3 3433 4 99999999984 1111111 1457899999999999999999999997 89999988
Q ss_pred HHhcC--CCCCcHHHHHHHHHHhCC-----------hHHHHHHHHHHHHHHHHHHHHHccCCCCeec-------------
Q 014492 306 WRAKQ--PYNVSVAAEVAACAALQN-----------PIYLEKVKEALIKERERLFKLLKDVPFLNPY------------- 359 (423)
Q Consensus 306 ~~~~~--~~~~~~~~~~a~~~~l~~-----------~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~------------- 359 (423)
..... .++++.++|.++..+|++ .+++++++++++++++++.+.|++++++.+.
T Consensus 241 ~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~~~~~f~~~~ 320 (391)
T 3bwn_A 241 VEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKESDAFTLPKYPEAFCNYFGKS 320 (391)
T ss_dssp HHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSEECCCCCCEEETTTTEE
T ss_pred HHHhcccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccCCcccccccccc
Confidence 87765 478899999999999975 3578999999999999999999987544321
Q ss_pred -CCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCC-CCeEEEEecChhhHHHHHHHHhhh
Q 014492 360 -PSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKEL-KGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 360 -p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~-~~~iRis~~~~~~~~~l~~al~~l 422 (423)
|.+|+|+|+++++. +.+.+.|.++||.++++..++. ++++|||++..+ +++.+++++|
T Consensus 321 ~~~~g~~~~~~~~~~---~~~~~~l~~~gV~v~pg~~fg~~~~~iRis~~~~~--e~i~~~~~~L 380 (391)
T 3bwn_A 321 LESYPAFAWLGTKEE---TDLVSELRRHKVMSRAGERCGSDKKHVRVSMLSRE--DVFNVFLERL 380 (391)
T ss_dssp ECCCCSEEEEEESSS---CCHHHHHHHTTEECEEGGGGTCCTTEEEEESCSCH--HHHHHHHHHH
T ss_pred CCCcceEEEecCCcH---HHHHHHHHHCCEEEccCCCCCCCCCEEEEEecCCH--HHHHHHHHHH
Confidence 34566999999742 3556667799999999877543 789999998633 4455555554
No 66
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=100.00 E-value=1.7e-42 Score=340.27 Aligned_cols=324 Identities=18% Similarity=0.255 Sum_probs=265.8
Q ss_pred CeeEcCCCCCCCCCCHHHHHHHhcCC--CCCCCCCcchHHHHHHHHHHh----C--CCCCcEEEeCCHHHHHHHHHHHhc
Q 014492 96 DIVKIDANENPYGPPPEVREALGQLK--FPYIYPDPESRRLRAALAKDS----G--LESDHILVGCGADELIDLIMRCVL 167 (423)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~~--~~~~Y~~~g~~~lr~~ia~~~----g--~~~~~i~~t~G~~~al~~~~~~l~ 167 (423)
++++|+.++++++++|++.+++.+.. ...+|++. ..++|+++++++ | +++++|++|+|+++++..++++++
T Consensus 32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~-~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~ 110 (392)
T 3b1d_A 32 QLLPAWIADMDFEVMPEVKQAIHDYAEQLVYGYTYA-SDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAFT 110 (392)
Confidence 78999999999999999999988732 23567765 788999999876 4 567899999999999999999999
Q ss_pred CCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC-C--CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHH
Q 014492 168 DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-S--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL 244 (423)
Q Consensus 168 ~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~ 244 (423)
++||+|+++.|+|..+...++..|++++.+|.+ . +|.+|++++++.+.+.++++|++++|+||||.+++.+++++|+
T Consensus 111 ~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~l~ 190 (392)
T 3b1d_A 111 KEGEAVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWEREVLEQIG 190 (392)
Confidence 999999999999999999999899999999864 2 3568999999998756789999999999999999977777766
Q ss_pred cC----CCEEEEccCCccccCCCc---hhhhhcc--CCcEEEEccChhhhcccCccccccccCH-HHHHHHHHhcCCC--
Q 014492 245 EM----PILVVLDEAYTEFSGLES---RMEWVKK--HDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWRAKQPY-- 312 (423)
Q Consensus 245 ~~----~~~li~Deay~~~~~~~~---~~~~~~~--~~~~i~i~S~SK~~g~~G~R~G~i~~~~-~~~~~l~~~~~~~-- 312 (423)
+. |+++|+||+|.++.+.+. ....+.. .+++++++|+||.+|++|+|+||+++++ ++++.+......+
T Consensus 191 ~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~ 270 (392)
T 3b1d_A 191 HLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENPTLCAQFKHQQLVNNH 270 (392)
Confidence 64 899999999999876432 1222222 5788999999999999999999999975 5888887776655
Q ss_pred -CCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHcc-CCCCee-cCCCceEEEEEeCC-CCCHHHHHHHHH-hC
Q 014492 313 -NVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKD-VPFLNP-YPSYSNFILCEVTS-GMDAKKLKDDLA-KM 386 (423)
Q Consensus 313 -~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~-~p~~~~~~~~~~~~-~~~~~~l~~~L~-~~ 386 (423)
+.+++++.++.++|++ .+++++.+++++++++++.+.|++ ++++.+ .+.+++++|++++. +.+..++.+.|. ++
T Consensus 271 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~l~~~~ 350 (392)
T 3b1d_A 271 HEVSSLGYIATETAYRYGKPWLVALKAVLEENIQFAVEYFAQEAPRLKVMKPQGTYLIWLDFSDYGLTDDALFTLLHDQA 350 (392)
Confidence 4688889988888876 578889999999999999999987 655554 34556667899874 356788999996 88
Q ss_pred CcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014492 387 GVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 387 gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
||.++++..+. .++++||+++..+ +++.+++++|
T Consensus 351 gi~v~~g~~f~~~~~~~iRi~~~~~~--e~i~~~l~~l 386 (392)
T 3b1d_A 351 KVILNRGSDYGSEGELHARLNIAAPK--SLVEEICKRI 386 (392)
Confidence 99999877643 4679999998753 6688887766
No 67
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=100.00 E-value=1.4e-38 Score=314.03 Aligned_cols=316 Identities=17% Similarity=0.173 Sum_probs=247.6
Q ss_pred CCCeeEcCCCCC-CCCCCHHHHHHHhcCC--CCCCC-CCcchHHHHHHHHHHh-CCC-----CCcEE--EeCCHHHHHHH
Q 014492 94 PEDIVKIDANEN-PYGPPPEVREALGQLK--FPYIY-PDPESRRLRAALAKDS-GLE-----SDHIL--VGCGADELIDL 161 (423)
Q Consensus 94 ~~~~i~l~~~~~-~~~~~~~v~~al~~~~--~~~~Y-~~~g~~~lr~~ia~~~-g~~-----~~~i~--~t~G~~~al~~ 161 (423)
..++|+|+.|++ ++..++.+.+++.+.. ..++| +..|..++|+++++++ |.. +++|. .+.|+++++..
T Consensus 40 ~~~~i~l~~g~~~d~~~~~~v~~a~~~a~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~~~~g~ga~~~ 119 (409)
T 4eu1_A 40 AKRKVNLSIGVYRDDADQPFVLECVKQATLGTNMDYAPVTGIASFVEEAQKLCFGPTCAALRDGRIASCQTLGGTGALRI 119 (409)
T ss_dssp CSSCEECCCSSCCCTTSCCCCCHHHHTCCCCSCCCCCCTTCCHHHHHHHHHHHHCSSCHHHHTTCEEEEEESHHHHHHHH
T ss_pred CcCceeeeeeEEECCCCCEeecHHHHhcCccccccCCCCCCcHHHHHHHHHHHcCCCchhhccCceeeeecccchHHHHH
Confidence 467899999986 7877777778777642 23567 5568899999999986 665 67884 48999999887
Q ss_pred H---HHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC--CCCCCCCHHHHHHHhhc--CCceEEEEcCCCCCcCcC
Q 014492 162 I---MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER--EKPKCIFLTSPNNPDGSI 234 (423)
Q Consensus 162 ~---~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~ 234 (423)
+ ++.++++||.|+++.|+|..+...++..|++++.+|. ++++.+|++++++.+++ .+++++++++||||||.+
T Consensus 120 ~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~ 199 (409)
T 4eu1_A 120 GGDLLNRFVANCNRIYGPDVGYPNHESIFAKAGMELTPYSYYDPATKGLNLAGMLECLDKAPEGSVILVHACAHNPTGVD 199 (409)
T ss_dssp HHHHGGGTSSSCCEEEEESSCCTHHHHHHHHTTCEEEEECCEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCC
T ss_pred HHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCeEEEEEeecCcCCcCcHHHHHHHHHhCCCCcEEEEECCCCCCCCCC
Confidence 5 4455789999999999999999999999999999996 45688999999999963 356677779999999999
Q ss_pred CCHHHHHHHHcC----CCEEEEccCCccccCCCc-----hhh-hhccCCcEEEEccChhhhcccCcccccc---ccCHH-
Q 014492 235 INDEDLLKILEM----PILVVLDEAYTEFSGLES-----RME-WVKKHDNLIVLRTFSKRAGLAGLRVGYG---AFPLS- 300 (423)
Q Consensus 235 ~~~~~l~~i~~~----~~~li~Deay~~~~~~~~-----~~~-~~~~~~~~i~i~S~SK~~g~~G~R~G~i---~~~~~- 300 (423)
++.+++++|++. |+++|+||+|.++.+++. ... ..+..+++++++||||.||++|+|+||+ +.+++
T Consensus 200 ~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~riG~~~~v~~~~~~ 279 (409)
T 4eu1_A 200 PTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNLIVAQSFSKNFGLYGHRCGALHISTASAEE 279 (409)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSSCCEEEEECTTTSSCGGGCCEEEEEECSSHHH
T ss_pred CCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCCcEEEEecCcccccCccCCceEEEEEeCCHHH
Confidence 999997777654 999999999999987651 122 2245678899999999999999999995 56777
Q ss_pred ---HHHHHHHhcC--CCCCcHHHHHHHHHHhCCh-------HHHHHHHHHHHHHHHHHHHHHccCCC---Ce-ecCCCce
Q 014492 301 ---IIEYLWRAKQ--PYNVSVAAEVAACAALQNP-------IYLEKVKEALIKERERLFKLLKDVPF---LN-PYPSYSN 364 (423)
Q Consensus 301 ---~~~~l~~~~~--~~~~~~~~~~a~~~~l~~~-------~~~~~~~~~~~~~~~~l~~~L~~~~~---~~-~~p~~~~ 364 (423)
+++.+..... .++.+.++|.++..+|++. +++++.+++++++++++.+.|++++. +. ..|.+++
T Consensus 280 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~ 359 (409)
T 4eu1_A 280 AKRLVSQLALLIRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKACGSVHDWSHIERQVGM 359 (409)
T ss_dssp HHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHSCSS
T ss_pred HHHHHHHHHHHHhhhcCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecCCceE
Confidence 6666655432 2567789999999999874 23677889999999999999998762 33 3567888
Q ss_pred EEEEEeCCCCCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhhh
Q 014492 365 FILCEVTSGMDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVG--KPEHTDALMECLMHL 422 (423)
Q Consensus 365 ~~~~~~~~~~~~~~l~~~L~-~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~l 422 (423)
|+|+.++ . ++...|+ ++||.+.++. ||+++ +.++++++.++|+++
T Consensus 360 ~~~~~~~----~-~~~~~ll~~~gv~v~p~~--------Ri~~~~~~~~~i~~~~~~l~~~ 407 (409)
T 4eu1_A 360 MAYTGLT----R-EQVELLRSEYHIYMTLNG--------RAAVSGLNSTNVEYVSQAIHNV 407 (409)
T ss_dssp EEECCCC----H-HHHHHHHHHHCEECCTTC--------EEEGGGCCTTTHHHHHHHHHHH
T ss_pred EEEeCCC----H-HHHHHHHHcCCEEEcCCC--------EEEEEecCHhhHHHHHHHHHHH
Confidence 8886653 3 4455655 7899999864 88886 455677777777653
No 68
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=100.00 E-value=9.2e-39 Score=314.41 Aligned_cols=327 Identities=14% Similarity=0.157 Sum_probs=247.6
Q ss_pred hHHHHHHhCCC-CCCeeEcCCCCC-CCCCC----HHHHHHHhcC---CCCCCCCC-cchHHHHHHHHHHhCC------CC
Q 014492 83 FEVLSIQLGRK-PEDIVKIDANEN-PYGPP----PEVREALGQL---KFPYIYPD-PESRRLRAALAKDSGL------ES 146 (423)
Q Consensus 83 ~~~~~~~~~~~-~~~~i~l~~~~~-~~~~~----~~v~~al~~~---~~~~~Y~~-~g~~~lr~~ia~~~g~------~~ 146 (423)
+..+...+... ..++|+|+.|.+ ++..+ +.+.+++.+. .....|+. .|.+++|++++++++. ++
T Consensus 15 i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~ 94 (401)
T 7aat_A 15 ILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSEAFKS 94 (401)
T ss_dssp HHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHT
T ss_pred hHHHHHHHhhCCCCCceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCCCCCCCHHHHHHHHHHhcCCCcccccc
Confidence 44444444333 245799999986 54322 4677777653 13467854 5889999999999853 38
Q ss_pred CcEEE--eCCHHHHHHHHHHHhc---CCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhc--C
Q 014492 147 DHILV--GCGADELIDLIMRCVL---DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVER--E 217 (423)
Q Consensus 147 ~~i~~--t~G~~~al~~~~~~l~---~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~--~ 217 (423)
++|++ |+|+++++.+++..+. ++||+|++++|+|..|...++..|++++.+|.+ +++++|++++++.+.+ .
T Consensus 95 ~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 174 (401)
T 7aat_A 95 GRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIPE 174 (401)
T ss_dssp TCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTSCT
T ss_pred CceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHHHHHHcCCeeEeeeeeccccCccCHHHHHHHHHhCCC
Confidence 89977 9999999998887664 899999999999999999999999999999963 3678999988877753 5
Q ss_pred CceEEEEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc---h--hh-hhccCCcEEEEccChhhhcc
Q 014492 218 KPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---R--ME-WVKKHDNLIVLRTFSKRAGL 287 (423)
Q Consensus 218 ~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~---~--~~-~~~~~~~~i~i~S~SK~~g~ 287 (423)
+++++++++||||||.+++.+++++|++. |+++|+||+|.++.+++. . .. .....+++++++||||.||+
T Consensus 175 ~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~ 254 (401)
T 7aat_A 175 KSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMGL 254 (401)
T ss_dssp TCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCC
T ss_pred CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcCCcEEEEecCCccccc
Confidence 68899999999999999999998888764 999999999999987542 1 11 12457889999999999999
Q ss_pred cCcccccccc---CHH----HHHHHHHhcCC--CCCcHHHHHHHHHHhCCh-------HHHHHHHHHHHHHHHHHHHHHc
Q 014492 288 AGLRVGYGAF---PLS----IIEYLWRAKQP--YNVSVAAEVAACAALQNP-------IYLEKVKEALIKERERLFKLLK 351 (423)
Q Consensus 288 ~G~R~G~i~~---~~~----~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~-------~~~~~~~~~~~~~~~~l~~~L~ 351 (423)
+|+|+||+++ +++ +.+.+...... .+.+..++.++..++++. +++++.+++++++++++.+.|+
T Consensus 255 ~G~RiG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~ 334 (401)
T 7aat_A 255 YGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLK 334 (401)
T ss_dssp GGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCceEEEEEEeCCHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999876 555 44444443332 456677888887788763 3467788899999999999998
Q ss_pred cCC---CCe-ecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhh
Q 014492 352 DVP---FLN-PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG--KPEHTDALMECLMH 421 (423)
Q Consensus 352 ~~~---~~~-~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~ 421 (423)
+++ .+. ..|.+++|+|+.++ .+.+...+.++||.+.++ +||+++ +.++++++.++|++
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ll~~~gi~v~~~--------~Ris~~~~~~~~i~~~~~~l~~ 398 (401)
T 7aat_A 335 KEGSSHNWQHITDQIGMFCFTGLK----PEQVERLTKEFSIYMTKD--------GRISVAGVASSNVGYLAHAIHQ 398 (401)
T ss_dssp HTTCCSCCHHHHHCCSSEEECCCC----HHHHHHHHHHHCEECCTT--------CEEEGGGCCTTTHHHHHHHHHH
T ss_pred hcCCCCCCceecCCcceEEecCCC----HHHHHHHHHhCCEeccCC--------CeEEeccCChhhHHHHHHHHHH
Confidence 874 233 35678888997663 455544445889999765 499997 34556777777665
No 69
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=100.00 E-value=2.4e-38 Score=310.67 Aligned_cols=315 Identities=15% Similarity=0.171 Sum_probs=247.8
Q ss_pred CCeeEcCCCC---CC--CCCCHHHHHHHhcC-C--CCCCC-CCcchHHHHHHHHHHh---C---CCCCcEEE--eCCHHH
Q 014492 95 EDIVKIDANE---NP--YGPPPEVREALGQL-K--FPYIY-PDPESRRLRAALAKDS---G---LESDHILV--GCGADE 157 (423)
Q Consensus 95 ~~~i~l~~~~---~~--~~~~~~v~~al~~~-~--~~~~Y-~~~g~~~lr~~ia~~~---g---~~~~~i~~--t~G~~~ 157 (423)
.++|+|+.|. +. ..+++.+.+++.+. . ..++| +..+..++|+++++++ + +++++|++ |+|+++
T Consensus 26 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~~~g~~~ 105 (396)
T 2q7w_A 26 PGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTG 105 (396)
T ss_dssp --CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHH
T ss_pred CCceecccccccCCCCCccCcHHHHHHHHhhcCcccccCCCCCCCCHHHHHHHHHHHhcCCCCccccccEEEEecccchh
Confidence 5679999997 22 25678999888763 1 33578 5668899999999998 3 34789998 999999
Q ss_pred HHHHHHHHh--cCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcC--CceEEEEcCCCCCc
Q 014492 158 LIDLIMRCV--LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVERE--KPKCIFLTSPNNPD 231 (423)
Q Consensus 158 al~~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~--~~~~i~l~~p~NPt 231 (423)
+++.+++.+ +.+||+|+++.|+|+.+...++..|++++.+|.+ +++.+|++++++.+.+. +++++++++|||||
T Consensus 106 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~npt 185 (396)
T 2q7w_A 106 ALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPT 185 (396)
T ss_dssp HHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTT
T ss_pred hHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHcCCceEEEecccCCCCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCC
Confidence 999998765 4699999999999999999999999999999974 56789999999999643 46788889999999
Q ss_pred CcCCCHHHHHHHHcC----CCEEEEccCCccccCCC--c--hhhhh-ccCCcEEEEccChhhhcccCcccccccc---CH
Q 014492 232 GSIINDEDLLKILEM----PILVVLDEAYTEFSGLE--S--RMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAF---PL 299 (423)
Q Consensus 232 G~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~--~--~~~~~-~~~~~~i~i~S~SK~~g~~G~R~G~i~~---~~ 299 (423)
|.+++.+++++|++. |+++|+||+|.++.+++ . ....+ ...+++++++|+||.+|++|+|+||+++ ++
T Consensus 186 G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~ 265 (396)
T 2q7w_A 186 GIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERVGACTLVAADS 265 (396)
T ss_dssp CCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGGCCEEEEEECSSH
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEeccccccccccccceEEEEcCCH
Confidence 999999988877764 99999999999988653 1 22222 2357899999999999999999999986 55
Q ss_pred ----HHHHHHHHh-cCCC-CCcHHHHHHHHHHhCCh-------HHHHHHHHHHHHHHHHHHHHHccCC---CCe-ecCCC
Q 014492 300 ----SIIEYLWRA-KQPY-NVSVAAEVAACAALQNP-------IYLEKVKEALIKERERLFKLLKDVP---FLN-PYPSY 362 (423)
Q Consensus 300 ----~~~~~l~~~-~~~~-~~~~~~~~a~~~~l~~~-------~~~~~~~~~~~~~~~~l~~~L~~~~---~~~-~~p~~ 362 (423)
++++.+... ...+ +.+.+++.++..+|++. +++++.+++++++++++.+.|++++ .+. ..|.+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~ 345 (396)
T 2q7w_A 266 ETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQN 345 (396)
T ss_dssp HHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCSCCTHHHHCC
T ss_pred HHHHHHHHHHHHHHhhccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecCCC
Confidence 455555442 2344 45899999999999875 5778888999999999999999876 233 35677
Q ss_pred ceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhh
Q 014492 363 SNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG--KPEHTDALMECLMH 421 (423)
Q Consensus 363 ~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~ 421 (423)
++|+|++++ .+.+.+.|.++||.+.++ +||+++ +.++++++.++|++
T Consensus 346 ~~~~~~~~~----~~~~~~~l~~~gv~v~~~--------~Ris~~~~~~e~i~~~~~~l~~ 394 (396)
T 2q7w_A 346 GMFSFSGLT----KEQVLRLREEFGVYAVAS--------GRVNVAGMTPDNMAPLCEAIVA 394 (396)
T ss_dssp SSEEECCCC----HHHHHHHHHHHCEECCTT--------CEEEGGGCCTTTHHHHHHHHHH
T ss_pred ceEEEecCC----HHHHHHHHHhcCeeecCC--------ceEEEeecCHHHHHHHHHHHHh
Confidence 889888764 455666666899999874 599998 66667777766654
No 70
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=322.19 Aligned_cols=297 Identities=19% Similarity=0.239 Sum_probs=234.1
Q ss_pred CCCCC-cchHHHHHHHHHHh-----CC--CCCcEEEeCCHHHHHHHHHHHhcCCCC----eEEEcCCCchhhHHHHHHCC
Q 014492 124 YIYPD-PESRRLRAALAKDS-----GL--ESDHILVGCGADELIDLIMRCVLDPGD----KIVDCPPTFTMYEFDAAVNG 191 (423)
Q Consensus 124 ~~Y~~-~g~~~lr~~ia~~~-----g~--~~~~i~~t~G~~~al~~~~~~l~~~gd----~Vl~~~p~y~~~~~~~~~~g 191 (423)
..|++ .|..++|+++++++ |+ ++++|++|+|+++++..+++.++++|| .|+++.|+|+.|...++..|
T Consensus 123 ~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~~~d~Vlv~~p~y~~~~~~~~~~g 202 (498)
T 3ihj_A 123 GSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVISELD 202 (498)
T ss_dssp -----CCSCHHHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHHCCCCGGGSEEEEEEESCCTHHHHHHHHTT
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCCCCEEEEeCCCchhHHHHHHHcC
Confidence 56854 47889999999986 44 678999999999999999999999875 99999999999999999999
Q ss_pred CeEEEecCC--CCCCCCHHHHHHHhhcC----CceEEEEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccC
Q 014492 192 AAVVKVPRK--SDFSLNVELIADAVERE----KPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSG 261 (423)
Q Consensus 192 ~~~~~v~~~--~~~~~d~~~l~~~i~~~----~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~ 261 (423)
++++.++.+ .+|.+|+++|++.+++. ++++|+++|||||||.+++.+++++|++. +++||+||+|.++.+
T Consensus 203 ~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~ 282 (498)
T 3ihj_A 203 AIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVY 282 (498)
T ss_dssp CEEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBC
T ss_pred CEEEEeeccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCcccccc
Confidence 999999965 35799999999999743 58999999999999999999998888774 999999999999876
Q ss_pred CCc--h--hhhh-c-------cCCcEEEEccChhhh-cccCccccccc---cCHHHHHHHHHhcCC-CCCcHHHHHHHHH
Q 014492 262 LES--R--MEWV-K-------KHDNLIVLRTFSKRA-GLAGLRVGYGA---FPLSIIEYLWRAKQP-YNVSVAAEVAACA 324 (423)
Q Consensus 262 ~~~--~--~~~~-~-------~~~~~i~i~S~SK~~-g~~G~R~G~i~---~~~~~~~~l~~~~~~-~~~~~~~~~a~~~ 324 (423)
++. . ...+ . ...++++++||||.| |++|+|+||++ .++++++.+.+.... ++.+.++|.++..
T Consensus 283 ~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l~~~l~~~~~~~~~~~~~~q~a~~~ 362 (498)
T 3ihj_A 283 SPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQLVKLLSVRLCPPVSGQAAMDI 362 (498)
T ss_dssp CTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHHHHHHHHHHHHSCCCCHHHHHHHHH
T ss_pred CCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHHHHHHHHHHHhccCCCCHHHHHHHHH
Confidence 532 1 1111 1 234589999999999 88999999998 689999888766543 5678899999999
Q ss_pred HhCC--------hHH---HHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCC-----------CCCHHHH-H
Q 014492 325 ALQN--------PIY---LEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS-----------GMDAKKL-K 380 (423)
Q Consensus 325 ~l~~--------~~~---~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~-----------~~~~~~l-~ 380 (423)
+++. .+| .++++++++++++++.+.|++++++.+ .|.+++|+|+++.. +.+.+++ +
T Consensus 363 ~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~p~gg~~~~~~l~~p~~~~~~~~~~g~~~~~~~~ 442 (498)
T 3ihj_A 363 VVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIHCNPLQGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYC 442 (498)
T ss_dssp HTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBSSEECCEECCCHHHHHHHHHTTSCHHHHHH
T ss_pred HhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEecCCCeEEEEEEeccCchhhhHHHHhcCCCcHHHHH
Confidence 9874 133 356778899999999999999866664 46778889977641 3455664 4
Q ss_pred HH-HHhCCcEEEeCCCC---CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 381 DD-LAKMGVMIRHYNNK---ELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 381 ~~-L~~~gI~v~~~~~~---~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.. |.++||.+++++.+ ...+++||+++.. .+++.+++++|
T Consensus 443 ~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~~~~--~e~l~~~i~~L 486 (498)
T 3ihj_A 443 MKLLEETGICVVPGSGFGQREGTYHFRMTILPP--VEKLKTVLQKV 486 (498)
T ss_dssp HHHHHHHCBCCEEGGGTCCCTTCCBEEEECCSC--HHHHHHHHHHH
T ss_pred HHHHHHCCEEEEeCcccCCCCCCCEEEEEeCCC--HHHHHHHHHHH
Confidence 44 55899999997764 3456999999743 25566655554
No 71
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=100.00 E-value=2.9e-38 Score=310.02 Aligned_cols=317 Identities=15% Similarity=0.166 Sum_probs=250.8
Q ss_pred CCCeeEcCCCCC---C--CCCCHHHHHHHhcC---CCCCCCCC-cchHHHHHHHHHHh-CC--CCCcEEE--eCCHHHHH
Q 014492 94 PEDIVKIDANEN---P--YGPPPEVREALGQL---KFPYIYPD-PESRRLRAALAKDS-GL--ESDHILV--GCGADELI 159 (423)
Q Consensus 94 ~~~~i~l~~~~~---~--~~~~~~v~~al~~~---~~~~~Y~~-~g~~~lr~~ia~~~-g~--~~~~i~~--t~G~~~al 159 (423)
+.++|+|+.|++ . ..+++.+.+++.+. ...++|++ .+..++|+++++++ +. ++++|++ |+|+++++
T Consensus 25 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~v~~~~~~g~~~a~ 104 (394)
T 2ay1_A 25 RQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELILGDGLKSETTATLATVGGTGAL 104 (394)
T ss_dssp CTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHHHHHGGGCCGGGEEEEEEEHHHHHH
T ss_pred CccccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCCCCCCCCcHHHHHHHHHHHhCCCCCcccEEEEecCCchhHH
Confidence 456899999973 2 35678999888763 13467854 57899999999997 55 7889999 99999999
Q ss_pred HHHHHHhcC--CCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcC--CceEEEEcCCCCCcCc
Q 014492 160 DLIMRCVLD--PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVERE--KPKCIFLTSPNNPDGS 233 (423)
Q Consensus 160 ~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~--~~~~i~l~~p~NPtG~ 233 (423)
+.+++.+.. +||+|+++.|+|..+...++..|++++.+|.+ +++.+|++++++.+++. +++++++++||||||.
T Consensus 105 ~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~nptG~ 184 (394)
T 2ay1_A 105 RQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGA 184 (394)
T ss_dssp HHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHHHHHHHHTCCTTCEEEEESSSCTTTCC
T ss_pred HHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCceEEEecccccCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCC
Confidence 999987754 99999999999999999999999999999974 56789999999999743 3567777999999999
Q ss_pred CCCHHHHHHHHcC----CCEEEEccCCccccCCC--c--hhhhh-ccCCcEEEEccChhhhcccCcccccccc---CHHH
Q 014492 234 IINDEDLLKILEM----PILVVLDEAYTEFSGLE--S--RMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAF---PLSI 301 (423)
Q Consensus 234 ~~~~~~l~~i~~~----~~~li~Deay~~~~~~~--~--~~~~~-~~~~~~i~i~S~SK~~g~~G~R~G~i~~---~~~~ 301 (423)
+++.+++++|++. |+++|+||+|.++.+++ . ....+ ...+++++++|+||.+|++|+|+||+++ ++++
T Consensus 185 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~ 264 (394)
T 2ay1_A 185 NLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIYRERTGCLLALCADAAT 264 (394)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTTTTTCGGGCEEEEEEECSSHHH
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCEEEEEeccCCCcCcCCccceEEEEeCCHHH
Confidence 9999988777664 99999999999988642 1 22222 2356899999999999999999999998 6665
Q ss_pred HHH----HHHh-cCCC-CCcHHHHHHHHHHhCCh-------HHHHHHHHHHHHHHHHHHHHHccCC---CCe-ecCCCce
Q 014492 302 IEY----LWRA-KQPY-NVSVAAEVAACAALQNP-------IYLEKVKEALIKERERLFKLLKDVP---FLN-PYPSYSN 364 (423)
Q Consensus 302 ~~~----l~~~-~~~~-~~~~~~~~a~~~~l~~~-------~~~~~~~~~~~~~~~~l~~~L~~~~---~~~-~~p~~~~ 364 (423)
++. +... ...+ +.+++++.++.++|++. +++++.+++++++++++.+.|++++ .+. ..|.+++
T Consensus 265 ~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~ 344 (394)
T 2ay1_A 265 RELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGELRDLSGSDRFGFVAEHRGM 344 (394)
T ss_dssp HHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTHHHHCCSS
T ss_pred HHHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeEEcCCceE
Confidence 443 3222 2334 45888999999999875 4688889999999999999998764 233 3456799
Q ss_pred EEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhhh
Q 014492 365 FILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG--KPEHTDALMECLMHL 422 (423)
Q Consensus 365 ~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~l 422 (423)
|+|++++ .+.+.+.|.++||.+.++ +||+++ +.++++++.++|+++
T Consensus 345 ~~~~~~~----~~~~~~~l~~~gi~v~~~--------~Ris~~~~~~~~i~~~~~~l~~~ 392 (394)
T 2ay1_A 345 FSRLGAT----PEQVKRIKEEFGIYMVGD--------SRINIAGLNDNTIPILARAIIEV 392 (394)
T ss_dssp EEECCCC----HHHHHHHHHHHCEECCTT--------CEEEGGGCCTTTHHHHHHHHHHH
T ss_pred EEeeCCC----HHHHHHHHHhCCEEecCC--------CeEEeecCCHhhHHHHHHHHHHc
Confidence 9998774 456666677899999875 499998 677778888777654
No 72
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=100.00 E-value=4.6e-38 Score=314.15 Aligned_cols=330 Identities=15% Similarity=0.155 Sum_probs=253.1
Q ss_pred CCchHHHHHHhCCCCC-CeeEcCCCCC-CCC----CCHHHHHHHhcC-----CCCCCC-CCcchHHHHHHHHHHh-CCC-
Q 014492 80 ILPFEVLSIQLGRKPE-DIVKIDANEN-PYG----PPPEVREALGQL-----KFPYIY-PDPESRRLRAALAKDS-GLE- 145 (423)
Q Consensus 80 ~~~~~~~~~~~~~~~~-~~i~l~~~~~-~~~----~~~~v~~al~~~-----~~~~~Y-~~~g~~~lr~~ia~~~-g~~- 145 (423)
.+++..+..++...+. +.|+|+.+.+ ++. ..+.+.+++.++ ...+.| +..|.+++|+++++++ |.+
T Consensus 33 ~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~g~~~ 112 (448)
T 3meb_A 33 PDAILNLTVLYNADTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPLFLEAAQFLMFGKDS 112 (448)
T ss_dssp CCTTHHHHHHHHHCCCTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTTCCHHHHHHHHHHHHCTTC
T ss_pred CChHHHHHHHHHhCCCCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCCCcchHHHHHHHHHHhcCCCc
Confidence 4445555555554443 4699999976 543 236777774432 233567 4468999999999997 876
Q ss_pred ----CCcEEE--eCCHHHHHHH--HHHHhcCCCCeEEEcCCCchhhHHHHH----HCCCeEEEecC-CC--CCCCCHHHH
Q 014492 146 ----SDHILV--GCGADELIDL--IMRCVLDPGDKIVDCPPTFTMYEFDAA----VNGAAVVKVPR-KS--DFSLNVELI 210 (423)
Q Consensus 146 ----~~~i~~--t~G~~~al~~--~~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~v~~-~~--~~~~d~~~l 210 (423)
+++|++ |+|+++++++ .+..++.+||+|++++|+|..+...++ ..|++++.+|. +. ++.+|++++
T Consensus 113 ~~~~~~~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~~~~~d~e~l 192 (448)
T 3meb_A 113 KAAQEGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTYLRKDGELEIDFSNT 192 (448)
T ss_dssp HHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHHHHCTTTSCCEEECCBCTTSCSSBCHHHH
T ss_pred cccCcCcEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHhhHHhCCCeEEEEeccccccCCCcCHHHH
Confidence 689999 9999999988 455678899999999999999999999 99999999996 54 489999999
Q ss_pred HHHhhc--CCceEEEEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc-----hhh-hhccCCcEEEE
Q 014492 211 ADAVER--EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES-----RME-WVKKHDNLIVL 278 (423)
Q Consensus 211 ~~~i~~--~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~-----~~~-~~~~~~~~i~i 278 (423)
++.+++ .+++++++++||||||.+++.+++++|++. |+++|+||+|.+|.+++. ... .....++++++
T Consensus 193 ~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 272 (448)
T 3meb_A 193 KKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFVDAGVEVLVA 272 (448)
T ss_dssp HHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHHHHTTCCEEEE
T ss_pred HHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchhHHHHhhcCCcEEEE
Confidence 999975 357788889999999999999998777664 999999999999987641 112 22456889999
Q ss_pred ccChhhhcccCcccccc--cc--------C-H----HHHHHHHHhcC-C-CCCcHHHHHHHHHHhCCh-------HHHHH
Q 014492 279 RTFSKRAGLAGLRVGYG--AF--------P-L----SIIEYLWRAKQ-P-YNVSVAAEVAACAALQNP-------IYLEK 334 (423)
Q Consensus 279 ~S~SK~~g~~G~R~G~i--~~--------~-~----~~~~~l~~~~~-~-~~~~~~~~~a~~~~l~~~-------~~~~~ 334 (423)
+||||.||++|+|+||+ ++ + + ++++.+..... . .+++.++|.++..+|.+. +.+++
T Consensus 273 ~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~ 352 (448)
T 3meb_A 273 QSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKTWSMSAIHGAYIVQVIVHDKRLLQMFYDNVKE 352 (448)
T ss_dssp EECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHH
T ss_pred ecccccCCCccccceeeeeeeccccccccCCHHHHHHHHHHHHHHHhcccCCccHHHHHHHHHHhcChHHHHHHHHHHHH
Confidence 99999999999999998 65 3 4 56666665332 2 467889999999999885 23778
Q ss_pred HHHHHHHHHHHHHHHHccC--CC------C-eecCCCceEEEEEeCCCCCHHHHHHHH-HhCCcEEEeCCCCCCCCeEEE
Q 014492 335 VKEALIKERERLFKLLKDV--PF------L-NPYPSYSNFILCEVTSGMDAKKLKDDL-AKMGVMIRHYNNKELKGYVRV 404 (423)
Q Consensus 335 ~~~~~~~~~~~l~~~L~~~--~~------~-~~~p~~~~~~~~~~~~~~~~~~l~~~L-~~~gI~v~~~~~~~~~~~iRi 404 (423)
++++++++++++.+.|+++ +. + ...|.+++|+|+.++ .++...| .++||.+.+|+ .||
T Consensus 353 ~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~~~ll~~~gV~v~~G~-------gRi 420 (448)
T 3meb_A 353 MSARIHRMRSLLHASLAKRKTPGPGSKGTWDHILTAIGMFTFTGLT-----PEHVDYLKEKWSIYLVKAG-------GRM 420 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHHHHCCSSEEECCCC-----HHHHHHHHHHHCEEECSGG-------GEE
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCcCcccccceeCCCceEEEecCCC-----HHHHHHHHHhCCEEEeCCC-------cEE
Confidence 8899999999999999887 32 2 245788999998763 3555555 57899999875 199
Q ss_pred EecC--hhhHHHHHHHHhh
Q 014492 405 SVGK--PEHTDALMECLMH 421 (423)
Q Consensus 405 s~~~--~~~~~~l~~al~~ 421 (423)
|++. .++++++.++|++
T Consensus 421 s~a~~~~~~i~~~~~~l~~ 439 (448)
T 3meb_A 421 SMCGLTESNCDYVAEAIHD 439 (448)
T ss_dssp EGGGCCTTTHHHHHHHHHH
T ss_pred EEecCCHHHHHHHHHHHHH
Confidence 9974 4445555555543
No 73
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=100.00 E-value=8.3e-38 Score=308.70 Aligned_cols=317 Identities=14% Similarity=0.172 Sum_probs=251.3
Q ss_pred CCCCeeEcCCCCC--C---CCCCHHHHHHHhcCC----CCCCC-CCcchHHHHHHHHHHh-CC-----CCCcEEE--eCC
Q 014492 93 KPEDIVKIDANEN--P---YGPPPEVREALGQLK----FPYIY-PDPESRRLRAALAKDS-GL-----ESDHILV--GCG 154 (423)
Q Consensus 93 ~~~~~i~l~~~~~--~---~~~~~~v~~al~~~~----~~~~Y-~~~g~~~lr~~ia~~~-g~-----~~~~i~~--t~G 154 (423)
.+.++|+|+.|.+ + ..+++.+.+++.+.. ..++| +..+..++|+++++++ +. ++++|++ |+|
T Consensus 28 ~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~t~g 107 (412)
T 1ajs_A 28 PDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLG 107 (412)
T ss_dssp CCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEH
T ss_pred CCCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccCCCCCCCCHHHHHHHHHHHhcCCCCccCCCcEEEEECCC
Confidence 3467899999974 2 245688998887632 33568 6668899999999998 54 6789999 999
Q ss_pred HHHHHHHHHH--HhcCCC-----CeEEEcCCCchhhHHHHHHCCCe-EEEecCC--CCCCCCHHHHHHHhhc--CCceEE
Q 014492 155 ADELIDLIMR--CVLDPG-----DKIVDCPPTFTMYEFDAAVNGAA-VVKVPRK--SDFSLNVELIADAVER--EKPKCI 222 (423)
Q Consensus 155 ~~~al~~~~~--~l~~~g-----d~Vl~~~p~y~~~~~~~~~~g~~-~~~v~~~--~~~~~d~~~l~~~i~~--~~~~~i 222 (423)
+++++.++++ .++++| |+|+++.|+|..+...++..|++ ++.+|.+ +++.+|++++++.+.+ .+++++
T Consensus 108 g~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v 187 (412)
T 1ajs_A 108 GTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFV 187 (412)
T ss_dssp HHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEE
T ss_pred cHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHHHHHcCCceeEEEeeecCCCCccCHHHHHHHHHhCCCCcEEE
Confidence 9999999964 456899 99999999999999999999999 9999963 5678999999999874 267788
Q ss_pred EEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCC---c--hhhhh-ccCCcEEEEccChhhhcccCccc
Q 014492 223 FLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE---S--RMEWV-KKHDNLIVLRTFSKRAGLAGLRV 292 (423)
Q Consensus 223 ~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~---~--~~~~~-~~~~~~i~i~S~SK~~g~~G~R~ 292 (423)
++++||||||.+++.+++++|++. |++||+||+|.++.+++ . ....+ ...++++++.|+||.+|++|+|+
T Consensus 188 ~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~ri 267 (412)
T 1ajs_A 188 LHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERV 267 (412)
T ss_dssp EESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCE
T ss_pred EECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHHhccCCcEEEEEecccccCCCCcce
Confidence 889999999999999988877764 99999999999988753 2 22222 24678999999999999889999
Q ss_pred ccccc---CHH----HHHHHHH-hcCCCC-CcHHHHHHHHHHhCChH-------HHHHHHHHHHHHHHHHHHHHccCC--
Q 014492 293 GYGAF---PLS----IIEYLWR-AKQPYN-VSVAAEVAACAALQNPI-------YLEKVKEALIKERERLFKLLKDVP-- 354 (423)
Q Consensus 293 G~i~~---~~~----~~~~l~~-~~~~~~-~~~~~~~a~~~~l~~~~-------~~~~~~~~~~~~~~~l~~~L~~~~-- 354 (423)
||+++ +++ +++.+.. ....+. .+.+++.++.++|++.+ ++++.+++++++++++.+.|++++
T Consensus 268 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 347 (412)
T 1ajs_A 268 GNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTP 347 (412)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEEEEecCCHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 99999 887 4554554 334454 58899999999998753 678889999999999999999876
Q ss_pred -CCe-ecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhh
Q 014492 355 -FLN-PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG--KPEHTDALMECLMH 421 (423)
Q Consensus 355 -~~~-~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~ 421 (423)
.+. ..|.+++|+|+.++ ...+...|.++||.++++ +||+++ +.++++++.++|++
T Consensus 348 ~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~gv~v~~~--------~Ris~~~~~~~~i~~~~~~l~~ 406 (412)
T 1ajs_A 348 GTWNHITDQIGMFSFTGLN----PKQVEYLINQKHIYLLPS--------GRINMCGLTTKNLDYVATSIHE 406 (412)
T ss_dssp SCCHHHHHCCSSEEECCCC----HHHHHHHHHTTCEECCTT--------SEEEGGGCCTTTHHHHHHHHHH
T ss_pred CCeeEEcCCCceEEEeCCC----HHHHHHHHHhCCEEecCC--------cEEEeeeCCHHHHHHHHHHHHH
Confidence 233 35678899998663 444555566899999874 499998 56666666655543
No 74
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=100.00 E-value=1.2e-37 Score=307.62 Aligned_cols=318 Identities=16% Similarity=0.182 Sum_probs=248.4
Q ss_pred CCCCeeEcCCCCC-CC----CCCHHHHHHHhc-CC---CCCCC-CCcchHHHHHHHHHHh-C-----CCCCcEEE--eCC
Q 014492 93 KPEDIVKIDANEN-PY----GPPPEVREALGQ-LK---FPYIY-PDPESRRLRAALAKDS-G-----LESDHILV--GCG 154 (423)
Q Consensus 93 ~~~~~i~l~~~~~-~~----~~~~~v~~al~~-~~---~~~~Y-~~~g~~~lr~~ia~~~-g-----~~~~~i~~--t~G 154 (423)
.+.++|+|+.|.+ +. .+++.+.+++.+ .. ..++| +..|..++|+++++++ + +++++|++ |+|
T Consensus 27 ~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~t~g 106 (412)
T 1yaa_A 27 QRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIFGTQSDALQEDRVISVQSLS 106 (412)
T ss_dssp CCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEH
T ss_pred CCCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccCCCCCCCcHHHHHHHHHHHhcCCCCCCCcceEEEEeccc
Confidence 3467899999874 22 467889988876 42 23568 5568899999999998 4 35789999 999
Q ss_pred HHHHHHHHH--HHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC-C-CCCCCCHHHHHHHhhcCC-ceEE-EEcCCC
Q 014492 155 ADELIDLIM--RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR-K-SDFSLNVELIADAVEREK-PKCI-FLTSPN 228 (423)
Q Consensus 155 ~~~al~~~~--~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~-~-~~~~~d~~~l~~~i~~~~-~~~i-~l~~p~ 228 (423)
+++++.+++ ..++.+||+|+++.|+|..+...++..|++++.+|. + +++.+|++++++.+.+.+ .+.+ ++++||
T Consensus 107 ~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~p~ 186 (412)
T 1yaa_A 107 GTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAH 186 (412)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEECSSC
T ss_pred hHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHHHHHHcCceEEEEeeecCCCCccCHHHHHHHHHhCCCCCEEEEeCCCC
Confidence 999999883 344579999999999999999999999999999997 3 367899999999987432 3444 458999
Q ss_pred CCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCC---c--hhhhh-ccCC---cEEEEccChhhhcccCcccccc
Q 014492 229 NPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE---S--RMEWV-KKHD---NLIVLRTFSKRAGLAGLRVGYG 295 (423)
Q Consensus 229 NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~---~--~~~~~-~~~~---~~i~i~S~SK~~g~~G~R~G~i 295 (423)
||||.+++.+++++|++. |+++|+||+|.++.+++ . ....+ ...+ ++++++|+||.+|++|+|+||+
T Consensus 187 nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~GlriG~~ 266 (412)
T 1yaa_A 187 NPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVGCF 266 (412)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEECTTTSCCGGGCEEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcCCCCcceEEEeccCCCCCCcCCcceEE
Confidence 999999999988877664 99999999999887653 2 22222 2345 8999999999999889999999
Q ss_pred c--c-----CHH----HHHHHHHh-cCCC-CCcHHHHHHHHHHhCCh-------HHHHHHHHHHHHHHHHHHHHHccCC-
Q 014492 296 A--F-----PLS----IIEYLWRA-KQPY-NVSVAAEVAACAALQNP-------IYLEKVKEALIKERERLFKLLKDVP- 354 (423)
Q Consensus 296 ~--~-----~~~----~~~~l~~~-~~~~-~~~~~~~~a~~~~l~~~-------~~~~~~~~~~~~~~~~l~~~L~~~~- 354 (423)
+ + +++ +++.+... ...+ +.+.++|.++..+|++. +++++.+++++++++++.+.|++++
T Consensus 267 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 346 (412)
T 1yaa_A 267 HLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGT 346 (412)
T ss_dssp EEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEEecCCCCCHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 8 7 566 77777763 3334 55889999999999876 3688899999999999999998875
Q ss_pred --CCe-ecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhhh
Q 014492 355 --FLN-PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG--KPEHTDALMECLMHL 422 (423)
Q Consensus 355 --~~~-~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~l 422 (423)
.+. ..|.+++|+|+.+ +...+...|.++||.+.+ ++||+++ +.++++++.++|+++
T Consensus 347 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~gi~v~~--------~~Ris~~~~~~~~i~~~~~~l~~~ 407 (412)
T 1yaa_A 347 PGNWDHIVNQCGMFSFTGL----TPQMVKRLEETHAVYLVA--------SGRASIAGLNQGNVEYVAKAIDEV 407 (412)
T ss_dssp SSCCTHHHHCCSSEEECCC----CHHHHHHHHHHHCEECCT--------TSEEEGGGCCTTTHHHHHHHHHHH
T ss_pred CCCeeeeccCceEEEeeCC----CHHHHHHHHHhCCEEecc--------CcEEEEccCCHhHHHHHHHHHHHH
Confidence 233 3567788888755 455664445588999987 4699998 667777777777653
No 75
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=100.00 E-value=9.7e-38 Score=307.06 Aligned_cols=338 Identities=15% Similarity=0.116 Sum_probs=250.8
Q ss_pred HhcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCC---CCC--CCCHHHHHHHhcC---CCCCCC-CCcchHHHHHHHHH
Q 014492 70 HLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANE---NPY--GPPPEVREALGQL---KFPYIY-PDPESRRLRAALAK 140 (423)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~---~~~--~~~~~v~~al~~~---~~~~~Y-~~~g~~~lr~~ia~ 140 (423)
++.++... |.+++..+.+++..+..+.|+|+.|. ..- +..|.|++|...+ ...+.| |..|.++||+++++
T Consensus 20 ~~~~v~~~-p~d~i~~l~~~~~~d~~~kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p~~G~p~lr~aia~ 98 (420)
T 4h51_A 20 RWQKIQAQ-APDVIFDLAKRAAAAKGPKANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLPISGYQPFIDEAVK 98 (420)
T ss_dssp HHHTCCCC-CCCHHHHHHHHHHHCCSSCEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHH
T ss_pred HHhCCCCC-CCChHHHHHHHHhcCCCCCEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCCcCChHHHHHHHHH
Confidence 45555544 55667777777766666689999983 222 3347888876552 334678 77799999999999
Q ss_pred Hh-C--CCCCc--EEEeCCHHHHHHHHHHHh----cCCCCeEEEcCCCchhhHHHHHHCCCeEE-Eec--CCCCCCCCHH
Q 014492 141 DS-G--LESDH--ILVGCGADELIDLIMRCV----LDPGDKIVDCPPTFTMYEFDAAVNGAAVV-KVP--RKSDFSLNVE 208 (423)
Q Consensus 141 ~~-g--~~~~~--i~~t~G~~~al~~~~~~l----~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~-~v~--~~~~~~~d~~ 208 (423)
++ | ...+. .+.|.|++.++...+..+ ++|||+|++++|+|+.|...++..|++.+ .++ .+.++.+|.+
T Consensus 99 ~~~g~~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~~aG~~~V~~~~~~~~~~~~~d~~ 178 (420)
T 4h51_A 99 IIYGNTVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKAAGWKNICTYAYYDPKTVSLNFE 178 (420)
T ss_dssp HHHC---CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHHHTTCCCEEEEECEEGGGTEECHH
T ss_pred HhcCCCccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHHHHcCCeEEEeeccccccccCCCHH
Confidence 85 3 23333 345888888876665543 57999999999999999999999999744 444 2356778999
Q ss_pred HHHHHhhc--CCceEEEEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCch------hhhhccCCcEE
Q 014492 209 LIADAVER--EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESR------MEWVKKHDNLI 276 (423)
Q Consensus 209 ~l~~~i~~--~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~------~~~~~~~~~~i 276 (423)
.+.+.+.. ++++++++++||||||.+++.+++++|++. ++++|+||+|.+|.+++.. ....+..++++
T Consensus 179 ~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~~~~~i 258 (420)
T 4h51_A 179 GMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARRGIEVL 258 (420)
T ss_dssp HHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCE
T ss_pred HHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhhCceEE
Confidence 98887753 466788888999999999999999999886 9999999999999876422 12234567899
Q ss_pred EEccChhhhcccCccccccccCHHHHHH-------HHHhc--CCCCCcHHHHHHHHHHhCChH-------HHHHHHHHHH
Q 014492 277 VLRTFSKRAGLAGLRVGYGAFPLSIIEY-------LWRAK--QPYNVSVAAEVAACAALQNPI-------YLEKVKEALI 340 (423)
Q Consensus 277 ~i~S~SK~~g~~G~R~G~i~~~~~~~~~-------l~~~~--~~~~~~~~~~~a~~~~l~~~~-------~~~~~~~~~~ 340 (423)
++.||||.|+++|+|+||++++.+..+. +.... ...+++..+|.++..++.+++ .++.++++++
T Consensus 259 ~~~s~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~~~~~m~~r~~ 338 (420)
T 4h51_A 259 LAQSFSKNMGLYSERAGTLSLLLKDKTKRADVKSVMDSLIREEYTCPPAHGARLAHLILSNNELRKEWEAELSAMAERIR 338 (420)
T ss_dssp EEEECTTTSCCGGGCEEEEEEECSCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHH
T ss_pred EEeccccccccccCceEEEEecccCHHHHHHHHHHHHHhhhcccCcchHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999875433222 22222 235678889999999998842 3567788999
Q ss_pred HHHHHHHHHHccCC----CCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec--ChhhHHH
Q 014492 341 KERERLFKLLKDVP----FLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG--KPEHTDA 414 (423)
Q Consensus 341 ~~~~~l~~~L~~~~----~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~ 414 (423)
++|+.+.+.|++++ |..+.++.|+|.|+.+ +. +.++.|.++||++.+++ |||++ +.+++++
T Consensus 339 ~~R~~l~~~L~~~g~~~~~~~i~~q~GmF~~~gl----s~-e~v~~L~e~~Vy~~~~g--------Ris~Agl~~~ni~~ 405 (420)
T 4h51_A 339 TMRRTVYDELLRLQTPGSWEHVINQIGMFSFLGL----SK-AQCEYCQNHNIFITVSG--------RANMAGLTHETALM 405 (420)
T ss_dssp HHHHHHHHHHHHTTCSSCCTHHHHCCSSEEECCC----CH-HHHHHHHHTTEECCTTC--------EEEGGGCCHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCeecCCCceEEecCc----CH-HHHHHHHhCCEEEcCCC--------EEEeccCCHHHHHH
Confidence 99999999998864 3334578899998755 44 44577889999988765 99997 4566677
Q ss_pred HHHHHhh
Q 014492 415 LMECLMH 421 (423)
Q Consensus 415 l~~al~~ 421 (423)
+.++|.+
T Consensus 406 ~a~aI~~ 412 (420)
T 4h51_A 406 LAQTIND 412 (420)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7666654
No 76
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=100.00 E-value=6.2e-38 Score=317.19 Aligned_cols=296 Identities=17% Similarity=0.277 Sum_probs=235.6
Q ss_pred CCCCC-cchHHHHHHHHHHhC------CCCCcEEEeCCHHHHHHHHHHHhc-CCCCeEEEcCCCchhhHHHHHHCCCeEE
Q 014492 124 YIYPD-PESRRLRAALAKDSG------LESDHILVGCGADELIDLIMRCVL-DPGDKIVDCPPTFTMYEFDAAVNGAAVV 195 (423)
Q Consensus 124 ~~Y~~-~g~~~lr~~ia~~~g------~~~~~i~~t~G~~~al~~~~~~l~-~~gd~Vl~~~p~y~~~~~~~~~~g~~~~ 195 (423)
..|++ .|..++|++++++++ +++++|++|+|+++++..++..++ ++||.|+++.|+|..|...++..|++++
T Consensus 128 ~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~ 207 (500)
T 3tcm_A 128 GAYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSASIALHGGALV 207 (500)
T ss_dssp SSCCCTTCCHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCSTTEEEEEEESCCTHHHHHHHHTTCEEE
T ss_pred CCcCCCcChHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCEEEEeCCCcHhHHHHHHHcCCEEE
Confidence 56854 578999999999873 678999999999999999999998 8999999999999999999999999999
Q ss_pred EecCCC--CCCCCHHHHHHHhhcC-----CceEEEEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc
Q 014492 196 KVPRKS--DFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES 264 (423)
Q Consensus 196 ~v~~~~--~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~ 264 (423)
.++.++ +|.+|+++|++.+++. ++++|++++|+||||.+++.+++++|++. |+++|+||+|.++.+++.
T Consensus 208 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~ 287 (500)
T 3tcm_A 208 PYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDN 287 (500)
T ss_dssp EEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTT
T ss_pred EEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCC
Confidence 999654 5799999999999742 78999999999999999999999998664 999999999999876421
Q ss_pred --h--hh----hh---ccCCcEEEEccChhhh-cccCcccccccc---CHHHHHHHHHhcC-CCCCcHHHHHHHHHHhCC
Q 014492 265 --R--ME----WV---KKHDNLIVLRTFSKRA-GLAGLRVGYGAF---PLSIIEYLWRAKQ-PYNVSVAAEVAACAALQN 328 (423)
Q Consensus 265 --~--~~----~~---~~~~~~i~i~S~SK~~-g~~G~R~G~i~~---~~~~~~~l~~~~~-~~~~~~~~~~a~~~~l~~ 328 (423)
. .. .+ ....++++++||||.| |++|+|+||+++ ++++++.+.+... .++.+.++|.++..+++.
T Consensus 288 ~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~ 367 (500)
T 3tcm_A 288 KKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIYKIASVNLCSNITGQILASLVMNP 367 (500)
T ss_dssp CCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTHHHHHHHHHHTTCCCCHHHHHHHHHHHSC
T ss_pred CCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHHHHHHHHHHhcccCCCHHHHHHHHHHhcC
Confidence 1 11 12 2234689999999998 899999999998 8999988877654 467889999999999874
Q ss_pred h-----------HHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeC--C---------CCCHHH-HH-HHH
Q 014492 329 P-----------IYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVT--S---------GMDAKK-LK-DDL 383 (423)
Q Consensus 329 ~-----------~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~--~---------~~~~~~-l~-~~L 383 (423)
. ++.++++++++++++++.+.|++++++.+ .|.+++|+|+++. . +...++ ++ +.|
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll 447 (500)
T 3tcm_A 368 PKASDESYASYKAEKDGILASLARRAKALEHAFNKLEGITCNEAEGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLL 447 (500)
T ss_dssp CCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBTTEECCEECCCHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEecCCeEEEEeeeecCchhhHHHHHhcCCCcHHHHHHHHH
Confidence 2 34567788899999999999999865654 5677888996553 1 112233 33 445
Q ss_pred HhCCcEEEeCCCC---CCCCeEEEEecChhhHHHHHHHHhh
Q 014492 384 AKMGVMIRHYNNK---ELKGYVRVSVGKPEHTDALMECLMH 421 (423)
Q Consensus 384 ~~~gI~v~~~~~~---~~~~~iRis~~~~~~~~~l~~al~~ 421 (423)
.++||.+++++.+ .+.+++||+++..+ +++.+++++
T Consensus 448 ~~~gI~v~pg~~f~~~~g~~~iRis~~~~~--e~i~~~i~~ 486 (500)
T 3tcm_A 448 ESTGIVVVPGSGFGQVPGTWHFRCTILPQE--DKIPAVISR 486 (500)
T ss_dssp HHHCEECEESTTTCCCTTCCBEEEESCSCT--TTHHHHHHH
T ss_pred HHCCEEEEeCcccCCCCCCCEEEEEECCCH--HHHHHHHHH
Confidence 5889999998774 34569999998432 334444443
No 77
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=100.00 E-value=1e-38 Score=325.34 Aligned_cols=320 Identities=16% Similarity=0.222 Sum_probs=239.7
Q ss_pred eeEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCc-chHHHHHHHHHHh-------CC---CCCcEEEeCCHHHHHHHHHHH
Q 014492 97 IVKIDANENPYGPPPEVREALGQLKFPYIYPDP-ESRRLRAALAKDS-------GL---ESDHILVGCGADELIDLIMRC 165 (423)
Q Consensus 97 ~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y~~~-g~~~lr~~ia~~~-------g~---~~~~i~~t~G~~~al~~~~~~ 165 (423)
+++|+.|++.++ ++.+.+++.+......||++ |..++|+++++.+ ++ ++++|++|+|+++++..++.+
T Consensus 106 ~i~l~~g~~~~~-~~~~~~al~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~~~I~~t~G~~eal~~~~~~ 184 (546)
T 2zy4_A 106 SLSYVRDQLGLD-PAAFLHEMVDGILGCNYPVPPRMLNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAAMAYIFES 184 (546)
T ss_dssp HHHHHHHTSCCC-HHHHHHHHHHHHHTCSCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGGEEEEEEEHHHHHHHHHHHH
T ss_pred hhecccCCCCCC-ChHHHHHHHHhhhcCCCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCcceEEEECCHHHHHHHHHHH
Confidence 688888888874 45666666552223678766 7888998887754 22 358999999999999999987
Q ss_pred -----hcCCCCeEEEcCCCchhhHHHHHH--CCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCC
Q 014492 166 -----VLDPGDKIVDCPPTFTMYEFDAAV--NGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236 (423)
Q Consensus 166 -----l~~~gd~Vl~~~p~y~~~~~~~~~--~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~ 236 (423)
++++||.|++++|+|+.|...+.. .|++++.+|.+ .+|.+|++++++.+. .++++|++|+||||||.+++
T Consensus 185 l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~k~v~l~~p~NPtG~~~~ 263 (546)
T 2zy4_A 185 LKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKD-PAIKIFFCVNPSNPPSVKMD 263 (546)
T ss_dssp HHHTTSSCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGS-TTEEEEEEESSCSSSCBCCC
T ss_pred hhhhhcCCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhC-CCCeEEEEECCCCCCCccCC
Confidence 478999999999999999988665 46899999864 357799999998875 68999999999999999999
Q ss_pred HHHHHHHH-----cC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHH-HHHHHHHh-
Q 014492 237 DEDLLKIL-----EM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-IIEYLWRA- 308 (423)
Q Consensus 237 ~~~l~~i~-----~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~-~~~~l~~~- 308 (423)
.+++++|+ +. |++||+||+|.+|.++....... ..+++++++||||.+|++|+|+||++++++ +++++.+.
T Consensus 264 ~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~~~s~~~~-~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~~l~~~~ 342 (546)
T 2zy4_A 264 QRSLERVRNIVAEHRPDLMILTDDVYGTFADDFQSLFAI-CPENTLLVYSFSKYFGATGWRLGVVAAHQQNVFDLALDKL 342 (546)
T ss_dssp HHHHHHHHHHHHHTCTTCEEEEECTTGGGSTTCCCHHHH-CGGGEEEEEESTTTTTCGGGCEEEEEEESSCHHHHHHHTS
T ss_pred HHHHHHHHHHHHhccCCcEEEEeCcchhhcccCcCHHHh-CCCCEEEEEeCccccCCCCcceEEEEECCHHHHHHHHhhc
Confidence 98877654 33 89999999999987643222222 236899999999999999999999999875 77766321
Q ss_pred ------------c-------------------------CCCCCcHHHHHHH-----HHHhCC-hHHHHHHHHHHHHHHHH
Q 014492 309 ------------K-------------------------QPYNVSVAAEVAA-----CAALQN-PIYLEKVKEALIKERER 345 (423)
Q Consensus 309 ------------~-------------------------~~~~~~~~~~~a~-----~~~l~~-~~~~~~~~~~~~~~~~~ 345 (423)
. ...+++.+.|.++ .+++++ ..|.+++++.++++++.
T Consensus 343 p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a~~a~~all~~~~~~~~~~r~~~~~r~~~ 422 (546)
T 2zy4_A 343 QESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQMALFSLFALMDEADEYKHTLKQLIRRRETT 422 (546)
T ss_dssp CHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred chhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 1 1135677877763 344554 57889999999999999
Q ss_pred HHHHHccCCCCeecCCCceEEEEEeCC----------------CCCH-HHHHHHHHhCCcEEEeCCCCC-CCCeEEEEec
Q 014492 346 LFKLLKDVPFLNPYPSYSNFILCEVTS----------------GMDA-KKLKDDLAKMGVMIRHYNNKE-LKGYVRVSVG 407 (423)
Q Consensus 346 l~~~L~~~~~~~~~p~~~~~~~~~~~~----------------~~~~-~~l~~~L~~~gI~v~~~~~~~-~~~~iRis~~ 407 (423)
+.+.|. +++....+.+++|+|++++. +.+. +.+.+.|.++||.+.||..++ .++++||+++
T Consensus 423 l~~~L~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~~~~~~~~l~~ll~~~gV~v~pG~~F~~~~~~iRis~~ 501 (546)
T 2zy4_A 423 LYRELG-MPPLRDENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQSSTGDMLFRIADETGIVLLPGRGFGSNRPSGRASLA 501 (546)
T ss_dssp HHGGGT-SSCCCCTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHSCCCEESSCTTCSSCEEEEESS
T ss_pred HHHhcC-CCcccCCCCeeEEEEEEHHHhhcccccHHHHHHhhccCCHHHHHHHHHHHCCEEEeCccccCCCCCeEEEEec
Confidence 999986 54322345677889999852 1223 335566679999999988743 4679999998
Q ss_pred C--hhhHHHHHHHHh
Q 014492 408 K--PEHTDALMECLM 420 (423)
Q Consensus 408 ~--~~~~~~l~~al~ 420 (423)
. .++.+++.++|+
T Consensus 502 ~~~~e~i~~~~~~l~ 516 (546)
T 2zy4_A 502 NLNEYEYAAIGRALR 516 (546)
T ss_dssp SSCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHH
Confidence 5 333334444444
No 78
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=100.00 E-value=2.1e-38 Score=313.32 Aligned_cols=322 Identities=17% Similarity=0.192 Sum_probs=243.2
Q ss_pred CCeeEcCCCCCCCCCC--HHHHHHHhcC-CC------CCCCCC-cchHHHHHHHHHHh------CCCCCcEEEeCCHHHH
Q 014492 95 EDIVKIDANENPYGPP--PEVREALGQL-KF------PYIYPD-PESRRLRAALAKDS------GLESDHILVGCGADEL 158 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~--~~v~~al~~~-~~------~~~Y~~-~g~~~lr~~ia~~~------g~~~~~i~~t~G~~~a 158 (423)
.++|+|+.+.++..++ +.+.+++.+. .. ...|++ .|..++|+++++++ ++++++|++|+|++++
T Consensus 31 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~t~a 110 (417)
T 3g7q_A 31 PGAIMLGGGNPAHIPAMQDYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVLLRETLGWDIEPQNIALTNGSQSA 110 (417)
T ss_dssp -CCEECSCCCCCCCHHHHHHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHH
T ss_pred CCceEecCcCCCCCChHHHHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCCcHHH
Confidence 5689999998877433 4556666553 11 136854 47899999999997 5788999999999999
Q ss_pred HHHHHHHhcCCCC-----eEEEc-CCCchhhHHHHHH------CCCeEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEc
Q 014492 159 IDLIMRCVLDPGD-----KIVDC-PPTFTMYEFDAAV------NGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLT 225 (423)
Q Consensus 159 l~~~~~~l~~~gd-----~Vl~~-~p~y~~~~~~~~~------~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~ 225 (423)
++++++.++++|| .|+++ .|+|..+...+.. .+..+..++.+ .++.+|+++++ +. +++++|+++
T Consensus 111 l~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~-~~~~~v~~~ 187 (417)
T 3g7q_A 111 FFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPEGQFKYHVDFEHLH--IG-EETGMICVS 187 (417)
T ss_dssp HHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEEGGGEEEEECCGGGCC--CC-TTEEEEEEE
T ss_pred HHHHHHHHcCCCccCCcceEEEeCCCccccchhhccchhhhccccCcccccCCcccccccCHHHhc--cc-cCceEEEEC
Confidence 9999999999987 89997 9999988766532 34455666543 24678999888 54 689999999
Q ss_pred CCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCchhh-hhccCCcEEEEccChhhhcccCccccccccCHH
Q 014492 226 SPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRME-WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS 300 (423)
Q Consensus 226 ~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~~~-~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~ 300 (423)
+||||||.+++.+++++|++. |+++|+||+|..+........ .....+++++++|||| ++++|+|+||++++++
T Consensus 188 ~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK-~~~~G~r~G~~~~~~~ 266 (417)
T 3g7q_A 188 RPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIFSEARPLWNPNIILCMSLSK-LGLPGSRCGIIIANDK 266 (417)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESGG-GTCTTSCCEEEECCHH
T ss_pred CCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccccccccccccCCCCCEEEEEechh-ccCCCcceEEEEeCHH
Confidence 999999999998777777653 999999999986432111111 1123578999999999 7889999999999999
Q ss_pred HHHHHHHhcC--CCCCcHHHHHHHHHHhCChHHHH---H-HHHHHHHHHHHHHHHHcc-CCC--Ce-ecCCCceEEEEEe
Q 014492 301 IIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLE---K-VKEALIKERERLFKLLKD-VPF--LN-PYPSYSNFILCEV 370 (423)
Q Consensus 301 ~~~~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~~---~-~~~~~~~~~~~l~~~L~~-~~~--~~-~~p~~~~~~~~~~ 370 (423)
+++.+..... .++.+.+++.++..++++.++.+ + ++++++++++.+.+.|++ ++. +. ..|.+++|+|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~ 346 (417)
T 3g7q_A 267 TITAIANMNGIISLAPGGMGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQQTIAIIRRYLSEERCLIHKPEGAIFLWLWF 346 (417)
T ss_dssp HHHHHHHHHHHHCCCCCSHHHHHHHHHHHTTCHHHHHHHTHHHHHHHHHHHHHHHHHHHCCTTTCEEECCCBSSEEEEEC
T ss_pred HHHHHHHhhcceeeCCCcHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeeCCCcceEEEEEc
Confidence 9998887654 35678899999999998765433 3 667788888888888866 442 34 3578899999999
Q ss_pred CC-CCCHHHHHHHHHhCCcEEEeCCCCC--C-------CCeEEEEecChhhHHHHHHHHhhh
Q 014492 371 TS-GMDAKKLKDDLAKMGVMIRHYNNKE--L-------KGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 371 ~~-~~~~~~l~~~L~~~gI~v~~~~~~~--~-------~~~iRis~~~~~~~~~l~~al~~l 422 (423)
+. +.+..++.+.|.++||.++++..+. . ++++||+++. +.+++.+++++|
T Consensus 347 ~~~~~~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~--~~~~i~~~~~~l 406 (417)
T 3g7q_A 347 KDLPITTELLYQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVP--EPDKIEAGVKIL 406 (417)
T ss_dssp TTCSSCHHHHHHHHHHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCS--CHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHCCEEEECchhhCCCCccccccCCCeEEEEecC--CHHHHHHHHHHH
Confidence 86 6789999999999999999876521 1 5799999986 246677777665
No 79
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=100.00 E-value=2.3e-39 Score=321.32 Aligned_cols=308 Identities=16% Similarity=0.114 Sum_probs=246.4
Q ss_pred CCCeeEcCCCCCCCCCCHHHHHHHhc-C-CC-CCC--CCCc--c---hHHHHHHHHHHhC------CCCCcEEEeCCHHH
Q 014492 94 PEDIVKIDANENPYGPPPEVREALGQ-L-KF-PYI--YPDP--E---SRRLRAALAKDSG------LESDHILVGCGADE 157 (423)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~-~~-~~~--Y~~~--g---~~~lr~~ia~~~g------~~~~~i~~t~G~~~ 157 (423)
+..+|+|+.+++++++++.+.+++.+ + .. ... |++. | ..+||++++++++ +++++|++|+|+++
T Consensus 55 ~~~~i~l~~g~~~~~~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~~iv~t~G~~~ 134 (427)
T 2hox_A 55 QGCSADVASGDGLFLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQ 134 (427)
T ss_dssp TTCCEECCSCCCGGGHHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEEESHHHH
T ss_pred CCceEEecCcCCCCCCCHHHHHhHHhhhhcCCcccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCCEEEEeCCHHH
Confidence 34679999999999877777777765 2 12 233 8654 6 7999999999985 67899999999999
Q ss_pred HHHHHHHHh--------cCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCC
Q 014492 158 LIDLIMRCV--------LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNN 229 (423)
Q Consensus 158 al~~~~~~l--------~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~N 229 (423)
++.+++.++ +++||.|+++.|+|..|...++..|++++. +.+|+++|++.+. .++|+|++++|||
T Consensus 135 al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~------~~~d~~~l~~~~~-~~~k~v~l~~p~N 207 (427)
T 2hox_A 135 LIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYV------WAGNAANYVNVSN-PEQYIEMVTSPNN 207 (427)
T ss_dssp HHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEE------EEEEGGGGTTCSC-GGGEEEEEESSCT
T ss_pred HHHHHHHHHhhccccccCCCCCEEEEeCCCcccHHHHHHHcCCeeee------ecCCHHHHHHhhc-CCceEEEEcCCCC
Confidence 999999999 899999999999999999999999988764 3467788888876 5789999999999
Q ss_pred CcCcCCCHHHHHHHHcCCCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCcccccccc-CHHHHHHHHHh
Q 014492 230 PDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRA 308 (423)
Q Consensus 230 PtG~~~~~~~l~~i~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~-~~~~~~~l~~~ 308 (423)
|||.+++ +.+ + ++..+.|++|.+ .......+. .+++++++||||.+|++|+|+||+++ ++++++++.+.
T Consensus 208 PtG~~~~-~~l----~-~~~~i~d~~~~~---~~~s~~~~~-~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~l~~~l~~~ 277 (427)
T 2hox_A 208 PEGLLRH-AVI----K-GCKSIYDMVYYW---PHYTPIKYK-ADEDILLFTMSKFTGHSGSRFGWALIKDESVYNNLLNY 277 (427)
T ss_dssp TTCCCCC-CSS----T-TCEEEEECTTCS---TTTSCCCSC-BCCSEEEEEHHHHTSCGGGCCEEEEECCHHHHHHHHHH
T ss_pred CcccccH-HHH----c-CCCEEEeecccC---CCCCccccC-CCceEEEEeChhcCCCCCceEEEEEECCHHHHHHHHHH
Confidence 9999999 533 2 567888888753 111111122 57889999999999999999999999 58999988876
Q ss_pred cCC--CCCcHHHHHHHHHHhCCh------------HHHHHHHHHHHHHHHHHHHHHccCCCCee---------------c
Q 014492 309 KQP--YNVSVAAEVAACAALQNP------------IYLEKVKEALIKERERLFKLLKDVPFLNP---------------Y 359 (423)
Q Consensus 309 ~~~--~~~~~~~~~a~~~~l~~~------------~~~~~~~~~~~~~~~~l~~~L~~~~~~~~---------------~ 359 (423)
... ++++.++|.++..+|++. +++++.+++++++++++.+.|++++++.+ .
T Consensus 278 ~~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~ 357 (427)
T 2hox_A 278 MTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMR 357 (427)
T ss_dssp HHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEE
T ss_pred HHhcCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCccccccccccccccccccC
Confidence 643 578999999998888752 35667889999999999999998743332 3
Q ss_pred CCCceEEEEEeCCCCCHHHHHHHHH-hCCcEEEeCCCCC-CCCeEEEEecChhhHHHHHHHHhhh
Q 014492 360 PSYSNFILCEVTSGMDAKKLKDDLA-KMGVMIRHYNNKE-LKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 360 p~~~~~~~~~~~~~~~~~~l~~~L~-~~gI~v~~~~~~~-~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
|.+++|+|++++. +..++++.|+ ++||.++++..++ .++++|||++.. .++|.+++++|
T Consensus 358 p~~g~f~~~~~~~--~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~Ris~~~~--~e~l~~~l~~l 418 (427)
T 2hox_A 358 PPSPSYAWVKCEW--EEDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLIKT--QDDFDQLMYYL 418 (427)
T ss_dssp CCCCSEEEEEECS--GGGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECSSC--HHHHHHHHHHH
T ss_pred CCCceEEEEECCC--cHHHHHHHHHHHCCEEEcCCCccCCCCCEEEEEecCC--HHHHHHHHHHH
Confidence 5569999999974 4566778775 8999999987644 378999999974 36788888776
No 80
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=100.00 E-value=1.6e-38 Score=323.68 Aligned_cols=322 Identities=19% Similarity=0.196 Sum_probs=247.9
Q ss_pred CeeEcCCCCCCCCCCHHHHHHHh-cCCCCCCC-CCcchHHHHHHHHHHh-----C-CC---CCcEEEeCCHHHHHHHHHH
Q 014492 96 DIVKIDANENPYGPPPEVREALG-QLKFPYIY-PDPESRRLRAALAKDS-----G-LE---SDHILVGCGADELIDLIMR 164 (423)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~-~~~~~~~Y-~~~g~~~lr~~ia~~~-----g-~~---~~~i~~t~G~~~al~~~~~ 164 (423)
++++|+.+.++++ +|++++++. .+.....| |..|..++|+++++++ + +. +++|++|+|+++++..++.
T Consensus 104 ~~i~l~~g~~~~~-~~~~v~a~~~~~~~~~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~al~~~~~ 182 (533)
T 3f6t_A 104 DAVNYCHTELGLN-RDKVVAEWVNGAVANNYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFH 182 (533)
T ss_dssp HHHHHHHHTTCCC-HHHHHHHHHHHHHTCSCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHHHHHHHH
T ss_pred hheeccCCCCCcC-CcHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHHHHHHHH
Confidence 4688888888886 455554443 33322223 4567899999999987 2 22 3699999999999999999
Q ss_pred H-----hcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC----CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCC
Q 014492 165 C-----VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR----KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII 235 (423)
Q Consensus 165 ~-----l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~----~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~ 235 (423)
+ ++++||+|+++.|+|..+...++..|++++.++. ++++.+|++++++.+. +++++|++++|+||||.++
T Consensus 183 ~l~~~~l~~~gd~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~-~~~k~v~l~~p~NPtG~~~ 261 (533)
T 3f6t_A 183 SLAENHLLKKGDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKD-PSIKALIVVNPTNPTSKEF 261 (533)
T ss_dssp HHHHTTSSCTTCEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSC-TTEEEEEEESSCTTTCBCC
T ss_pred HhhhhhccCCcCEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhC-CCCeEEEEeCCCCCCcccc
Confidence 8 7899999999999999999888889999999986 3468899999999996 6899999999999999999
Q ss_pred CHHHHHHHHc----C-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHH-----HHHHH
Q 014492 236 NDEDLLKILE----M-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-----IIEYL 305 (423)
Q Consensus 236 ~~~~l~~i~~----~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~-----~~~~l 305 (423)
+.+++++|++ . ++++|+||+|.++.++....... ..+++++++||||.+|++|+|+||++++++ +++.+
T Consensus 262 ~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~~~~~~-~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~~~~li~~l 340 (533)
T 3f6t_A 262 DTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSV-VPYNTMLVYSYSKLFGCTGWRLGVIALNEKNVFDDNIAHL 340 (533)
T ss_dssp CHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCCCHHHH-SGGGEEEEEESHHHHTCGGGCEEEEEEESSCHHHHHHHTS
T ss_pred CHHHHHHHHHHHHhCCCCEEEEcCCccccccCccCHhhc-CCCCEEEEecCcccCCCcccceEEEEECcHHHHHHHHHhc
Confidence 9997776655 5 99999999999988654333332 347899999999999999999999999765 33322
Q ss_pred --------------------------------HHhcC--CCCCcHHHHHH----HHHHhC-------ChHHHHHHHHHHH
Q 014492 306 --------------------------------WRAKQ--PYNVSVAAEVA----ACAALQ-------NPIYLEKVKEALI 340 (423)
Q Consensus 306 --------------------------------~~~~~--~~~~~~~~~~a----~~~~l~-------~~~~~~~~~~~~~ 340 (423)
.+... ..+.+.+.|.+ +..+|. ..+++++++++++
T Consensus 341 ~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~~~~g~~~~~~~~~~~~~~~~ 420 (533)
T 3f6t_A 341 DKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTSTNGGSDDPYIDIARKLVS 420 (533)
T ss_dssp CHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHTTCBGGGTBCHHHHHHHHHHH
T ss_pred chhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHH
Confidence 11111 24678888877 556664 2478899999999
Q ss_pred HHHHHHHHHHccCCCCeecCCCceEEEEEeCC------C----------CCHHHHHHHHH-hCCcEEEeCCCC-CCCCeE
Q 014492 341 KERERLFKLLKDVPFLNPYPSYSNFILCEVTS------G----------MDAKKLKDDLA-KMGVMIRHYNNK-ELKGYV 402 (423)
Q Consensus 341 ~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~------~----------~~~~~l~~~L~-~~gI~v~~~~~~-~~~~~i 402 (423)
++++.+.+.|. +++....|.+++|+|++++. + .+..++...|+ ++||.+.+++.+ ..++++
T Consensus 421 ~r~~~l~~~L~-~~~~~~~~~~g~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~ll~~~GV~v~pg~~f~~~~~~i 499 (533)
T 3f6t_A 421 ERYDQLHDAMQ-APKDETDTNTHYYSLIDIYRLAEKIYGKEFRDYLTNNFEQVDFLLKLAEKNGVVLVDGVGFGAKPGEL 499 (533)
T ss_dssp HHHHHHHHHHT-CCCCCSTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHTTSSSCTTEEECSSTTEE
T ss_pred HHHHHHHHhcC-CCccccCCCceEEEEEehHhhhhhccchHHHHHhhccCCHHHHHHHHHHhCCEEEeCCcccCCCCCEE
Confidence 99999999997 76544567889999998863 1 35667776665 889999987763 336899
Q ss_pred EEEecChhhHHHHHHHHhhh
Q 014492 403 RVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 403 Ris~~~~~~~~~l~~al~~l 422 (423)
||+++..+ .+++.+++++|
T Consensus 500 Rls~a~~~-~e~i~~~i~~L 518 (533)
T 3f6t_A 500 RVSQANLP-TEDYALIGKQV 518 (533)
T ss_dssp EEESSSSC-HHHHHHHHHHH
T ss_pred EEEEeeCC-HHHHHHHHHHH
Confidence 99998532 24566655554
No 81
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=100.00 E-value=1.2e-37 Score=310.51 Aligned_cols=324 Identities=18% Similarity=0.186 Sum_probs=248.5
Q ss_pred CCee-EcCCCCCCCCCC--HHHHHHHhcC-CC-------C------CCCCC-cchHHHHHHHHHHh------CCCCCcEE
Q 014492 95 EDIV-KIDANENPYGPP--PEVREALGQL-KF-------P------YIYPD-PESRRLRAALAKDS------GLESDHIL 150 (423)
Q Consensus 95 ~~~i-~l~~~~~~~~~~--~~v~~al~~~-~~-------~------~~Y~~-~g~~~lr~~ia~~~------g~~~~~i~ 150 (423)
+++| +|+.+.++..++ +.+.+++.+. .. . .+|++ .+.+++|+++++++ ++++++|+
T Consensus 31 ~~~i~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~ 110 (444)
T 3if2_A 31 DQPVNMLGGGNPAKIDAVNELFLETYKALGNDNDTGKANSSAIISMANYSNPQGDSAFIDALVGFFNRHYDWNLTSENIA 110 (444)
T ss_dssp SSCCEECSCCCCCCCHHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEE
T ss_pred chhhhccCCCCCCcccchHHHHHHHHHHHHhccccccccchhhhhhhccCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEE
Confidence 5679 999998877432 3455555542 22 1 45754 47899999999997 57889999
Q ss_pred EeCCHHHHHHHHHHHhcCCCC--------------eEEEc-CCCchhhHHH------HHHCCCeEEEecCCC-----CCC
Q 014492 151 VGCGADELIDLIMRCVLDPGD--------------KIVDC-PPTFTMYEFD------AAVNGAAVVKVPRKS-----DFS 204 (423)
Q Consensus 151 ~t~G~~~al~~~~~~l~~~gd--------------~Vl~~-~p~y~~~~~~------~~~~g~~~~~v~~~~-----~~~ 204 (423)
+|+|+++++++++++++++|| .|+++ .|+|..|... ....|..++.++.+. ++.
T Consensus 111 ~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 190 (444)
T 3if2_A 111 LTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYR 190 (444)
T ss_dssp EESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCSSSCCEEECCCEEEEEEETTEEEEEEEE
T ss_pred EecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhcccccchhhccCceEEecccccccCccccC
Confidence 999999999999999999988 78775 9999988763 334688888888653 257
Q ss_pred CCHHHHHHH---hhcCCceEEEEcCCCCCcCcCCCHHHHHHHHc---C-CCEEEEccCCccccCCCchhh-hhccCCcEE
Q 014492 205 LNVELIADA---VEREKPKCIFLTSPNNPDGSIINDEDLLKILE---M-PILVVLDEAYTEFSGLESRME-WVKKHDNLI 276 (423)
Q Consensus 205 ~d~~~l~~~---i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~---~-~~~li~Deay~~~~~~~~~~~-~~~~~~~~i 276 (423)
+|+++|+++ +. +++++|++++||||||.+++.+++++|++ . |++||+||+|..+........ .....++++
T Consensus 191 ~d~~~l~~~l~~~~-~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i 269 (444)
T 3if2_A 191 VDFEALENLPALKE-GRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNIIYSDAHLNWDNNTI 269 (444)
T ss_dssp CCHHHHHTCHHHHT-TCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEE
T ss_pred CCHHHHHHHHHhcC-CCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCcccccccccccccCCCCEE
Confidence 999999998 44 68999999999999999999777777654 3 999999999986432111111 012357899
Q ss_pred EEccChhhhcccCccccccccCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHH---HH-HHHHHHHHHHHHHHHH
Q 014492 277 VLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYL---EK-VKEALIKERERLFKLL 350 (423)
Q Consensus 277 ~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~---~~-~~~~~~~~~~~l~~~L 350 (423)
++.|+||. +++|+|+||+++++++++.+...... ++.+++.+.++..+++..++. .+ .+++++++++.+.+.|
T Consensus 270 ~~~S~sK~-~~~G~r~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l 348 (444)
T 3if2_A 270 LCFSLSKI-GLPGMRTGIIVADAKVIEAVSAMNAVVNLAPTRFGAAIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLL 348 (444)
T ss_dssp EEEESTTT-TCGGGCCEEEECCHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEechhhc-cCCCCceEEEEECHHHHHHHHHHHHhccCCCChHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999996 78999999999999999988776543 677889999999999875543 33 5667888888888887
Q ss_pred cc-CCC--Ce-ecCCCceEEEEEeCC-CCCHHHHHHHHHhCCcEEEeCCCC--C--------CCCeEEEEecChhhHHHH
Q 014492 351 KD-VPF--LN-PYPSYSNFILCEVTS-GMDAKKLKDDLAKMGVMIRHYNNK--E--------LKGYVRVSVGKPEHTDAL 415 (423)
Q Consensus 351 ~~-~~~--~~-~~p~~~~~~~~~~~~-~~~~~~l~~~L~~~gI~v~~~~~~--~--------~~~~iRis~~~~~~~~~l 415 (423)
.+ ++. +. ..|.+++|+|++++. +.+..++.+.|.++||.++++..+ + ..+++||+++. +.+++
T Consensus 349 ~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~--~~e~i 426 (444)
T 3if2_A 349 KQALGDYPLMIHKPEGAIFLWLWFKDLPISTLDLYERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAA--DEQTL 426 (444)
T ss_dssp HHHSSSSSEEEECCCBSSEEEEEETTCSSCHHHHHHHHHHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSS--CHHHH
T ss_pred HHhcccCCceEecCCccEEEEEEcCCCCCCHHHHHHHHHHCCeEEecchhhcCCCCCcccccCCCeEEEEEeC--CHHHH
Confidence 65 442 23 357789999999986 678999999999999999987653 1 13689999987 23667
Q ss_pred HHHHhhh
Q 014492 416 MECLMHL 422 (423)
Q Consensus 416 ~~al~~l 422 (423)
.+++++|
T Consensus 427 ~~~l~~l 433 (444)
T 3if2_A 427 IDGIKVI 433 (444)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7766654
No 82
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=100.00 E-value=2.4e-36 Score=296.81 Aligned_cols=317 Identities=16% Similarity=0.083 Sum_probs=247.6
Q ss_pred CCCCeeEcCCCCC-CCCCCHHHHHHHhcC----CCC-CCCCC-cc----hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492 93 KPEDIVKIDANEN-PYGPPPEVREALGQL----KFP-YIYPD-PE----SRRLRAALAKDSGLESDHILVGCGADELIDL 161 (423)
Q Consensus 93 ~~~~~i~l~~~~~-~~~~~~~v~~al~~~----~~~-~~Y~~-~g----~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~ 161 (423)
.+.++++|+.|++ ++++++.+.+++.+. ... ..|+. .| ..++++.+++++|. +++++|+|+++++..
T Consensus 41 ~g~~~idl~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~--~~v~~~~ggt~a~~~ 118 (398)
T 3a2b_A 41 DGRRVLMFGSNSYLGLTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVGK--EAAILFSTGFQSNLG 118 (398)
T ss_dssp TTEEEEECSCSCTTCGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHH
T ss_pred CCceEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC--CcEEEECCHHHHHHH
Confidence 3467899999987 666788888887652 111 22322 12 45678888888886 589999999999999
Q ss_pred HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcC---CceEEEEcCCCCCcCcCCCHH
Q 014492 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE---KPKCIFLTSPNNPDGSIINDE 238 (423)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~---~~~~i~l~~p~NPtG~~~~~~ 238 (423)
++++++++||.|+++.|+|..+...++..|++++.+|. +|++++++.+.+. ++++|++++|+||||.+++.+
T Consensus 119 ~~~~~~~~gd~V~~~~p~~~~~~~~~~~~g~~~~~v~~-----~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG~~~~~~ 193 (398)
T 3a2b_A 119 PLSCLMGRNDYILLDERDHASIIDGSRLSFSKVIKYGH-----NNMEDLRAKLSRLPEDSAKLICTDGIFSMEGDIVNLP 193 (398)
T ss_dssp HHHHSSCTTCEEEEETTCCHHHHHHHHHSSSEEEEECT-----TCHHHHHHHHHTSCSSSCEEEEEESBCTTTCCBCCHH
T ss_pred HHHHHhCCCCEEEECCccCHHHHHHHHHcCCceEEeCC-----CCHHHHHHHHHhhccCCceEEEEeCCCCCCCCccCHH
Confidence 99999999999999999999999999999999999984 5899999998743 789999999999999999999
Q ss_pred HHHHHHcC-CCEEEEccCCccccCCCc---hhhhhccCCc-EEEEccChhhhcccCccccccccCHHHHHHHHHhcC---
Q 014492 239 DLLKILEM-PILVVLDEAYTEFSGLES---RMEWVKKHDN-LIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--- 310 (423)
Q Consensus 239 ~l~~i~~~-~~~li~Deay~~~~~~~~---~~~~~~~~~~-~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~--- 310 (423)
++.++|+. |+++|+||+|..+.++.. .....+..++ +++++|+||.++++| ||+++++++++.+.....
T Consensus 194 ~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~G---G~~~~~~~~~~~l~~~~~~~~ 270 (398)
T 3a2b_A 194 ELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLASLG---GFVAGDADVIDFLKHNARSVM 270 (398)
T ss_dssp HHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEECHHHHHHHHHHCHHHH
T ss_pred HHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecccccccCCC---cEEEeCHHHHHHHHHhcccce
Confidence 99999998 999999999998765321 1122222234 599999999999778 999999999988876421
Q ss_pred CCCCcHHHH-HHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcE
Q 014492 311 PYNVSVAAE-VAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVM 389 (423)
Q Consensus 311 ~~~~~~~~~-~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~ 389 (423)
..+.+.+.+ .++..+|+..+++++.+++++++++++.+.|++++ +.+.++.++|+|+.++++.+..++.+.|.++||.
T Consensus 271 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~g~~~~~~~~~~~~~~~l~~~l~~~gi~ 349 (398)
T 3a2b_A 271 FSASMTPASVASTLKALEIIQNEPEHIEKLWKNTDYAKAQLLDHG-FDLGATESPILPIFIRSNEKTFWVTKMLQDDGVF 349 (398)
T ss_dssp SSBCCCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHTT-CCBCSCCSSEEEEECCCHHHHHHHHHHHHHTTEE
T ss_pred ecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHhcC-CCcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCcE
Confidence 122333444 45667776655567888999999999999999884 4545566899999997555678899999988999
Q ss_pred EEeCCCCC---CCCeEEEEec---ChhhHHHHHHHHh
Q 014492 390 IRHYNNKE---LKGYVRVSVG---KPEHTDALMECLM 420 (423)
Q Consensus 390 v~~~~~~~---~~~~iRis~~---~~~~~~~l~~al~ 420 (423)
++++..+. .++++||+++ +.++++++.++|+
T Consensus 350 v~~~~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~ 386 (398)
T 3a2b_A 350 VNPVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMV 386 (398)
T ss_dssp CEEECTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHH
T ss_pred EEeeCCCCCCCCCceEEEEEeCCCCHHHHHHHHHHHH
Confidence 99887542 3689999998 4555555555554
No 83
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=100.00 E-value=2.7e-36 Score=295.04 Aligned_cols=318 Identities=15% Similarity=0.111 Sum_probs=251.3
Q ss_pred CCCCeeEcCCCCC-CCCCCHHHHHHHhcC----CC---CCCCCC---cchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492 93 KPEDIVKIDANEN-PYGPPPEVREALGQL----KF---PYIYPD---PESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (423)
Q Consensus 93 ~~~~~i~l~~~~~-~~~~~~~v~~al~~~----~~---~~~Y~~---~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~ 161 (423)
++.+++||+.+++ ++++++++.+++.+. .. ...|+. .+..++|+++++++|++ +.|++++| ++++..
T Consensus 37 ~g~~~id~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sG-t~a~~~ 114 (384)
T 1bs0_A 37 DDRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLGYS-RALLFISG-FAANQA 114 (384)
T ss_dssp TTEEEEECSCCCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTCS-EEEEESCH-HHHHHH
T ss_pred CCceEEEeeccCccCCCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhCCC-cEEEeCCc-HHHHHH
Confidence 3567899999886 556788988888652 11 123432 45789999999999985 56666666 789999
Q ss_pred HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcC--CceEEEEcCCCCCcCcCCCHHH
Q 014492 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE--KPKCIFLTSPNNPDGSIINDED 239 (423)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~--~~~~i~l~~p~NPtG~~~~~~~ 239 (423)
+++.++++||.|+++.|+|..+...++..|++++.+|. .|++++++.+++. +++++++++|+||||.+++.++
T Consensus 115 ~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~v~~~~~~nptG~~~~l~~ 189 (384)
T 1bs0_A 115 VIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAH-----NDVTHLARLLASPCPGQQMVVTEGVFSMDGDSAPLAE 189 (384)
T ss_dssp HHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEECT-----TCHHHHHHHHHSCCSSCEEEEEESBCTTTCCBCCHHH
T ss_pred HHHHhCCCCcEEEEcccccHHHHHHHHHcCCCEEEeCC-----CCHHHHHHHHHhcCCCCeEEEEeCCCCCCCCccCHHH
Confidence 99999999999999999999999999999999999983 5799999998743 3788888999999999999999
Q ss_pred HHHHHcC-CCEEEEccCCccccCC---CchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC----
Q 014492 240 LLKILEM-PILVVLDEAYTEFSGL---ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP---- 311 (423)
Q Consensus 240 l~~i~~~-~~~li~Deay~~~~~~---~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~---- 311 (423)
+.++|+. |+++|+||+|..+..+ .......+. +..++++|+||.+|++| ||+++++++++.+......
T Consensus 190 i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~di~~~s~sK~~~~~G---G~~~~~~~~~~~l~~~~~~~~~~ 265 (384)
T 1bs0_A 190 IQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKV-KPELLVVTFGKGFGVSG---AAVLCSSTVADYLLQFARHLIYS 265 (384)
T ss_dssp HHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTC-CCSEEEEESSSTTSSCC---EEEEECHHHHHHHHHHCHHHHSS
T ss_pred HHHHHHHcCcEEEEECCcccceecCCCCchHHhcCC-CCcEEEeeccchhhccC---cEEEeCHHHHHHHHHhchhhhcC
Confidence 9999987 9999999999876532 111222222 23489999999999777 9999999999888764322
Q ss_pred CCCcHHHHHHHHHHhCChH--HHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcE
Q 014492 312 YNVSVAAEVAACAALQNPI--YLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVM 389 (423)
Q Consensus 312 ~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~ 389 (423)
.+.+++.+.++.++++..+ +.++.+++++++++++.+.|++++ +.+.++.++|+|++++++.+..++.+.|.++||.
T Consensus 266 ~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~ 344 (384)
T 1bs0_A 266 TSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLP-FTLADSCSAIQPLIVGDNSRALQLAEKLRQQGCW 344 (384)
T ss_dssp BCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTSS-CEECSCCSSBCCEEEESHHHHHHHHHHHHHTTEE
T ss_pred CCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhcC-CcccCCCCCEEEEEeCCHHHHHHHHHHHHHCCcE
Confidence 2578888888888887644 778889999999999999999885 5666677888899887555678899999989999
Q ss_pred EEeCCCCC---CCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492 390 IRHYNNKE---LKGYVRVSVG---KPEHTDALMECLMHL 422 (423)
Q Consensus 390 v~~~~~~~---~~~~iRis~~---~~~~~~~l~~al~~l 422 (423)
++++..+. ..+++||+++ +.++++++.++|+++
T Consensus 345 v~~~~~~~~~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 345 VTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp CCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred EEeecCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 99876532 3479999998 566666666666654
No 84
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=100.00 E-value=1.7e-36 Score=296.61 Aligned_cols=317 Identities=15% Similarity=0.115 Sum_probs=248.7
Q ss_pred CeeEcCCCCCCCCCCHHHHHHHhcC-CC----C-C---CCCC--cchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHH
Q 014492 96 DIVKIDANENPYGPPPEVREALGQL-KF----P-Y---IYPD--PESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (423)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~-~~----~-~---~Y~~--~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~ 164 (423)
+.++|+.+.. .+.++.+.+++.+. .. + . .|++ .+..++|+++++++|+++++|++|+|+++++..+++
T Consensus 16 ~~i~l~~~~~-~~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~ 94 (390)
T 1elu_A 16 NKTYFNFGGQ-GILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETFNVDPNTITITDNVTTGCDIVLW 94 (390)
T ss_dssp TSEECCTTTC-CCCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHTTSCGGGEEEESSHHHHHHHHHH
T ss_pred CeEEecCCcc-CCCCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHcCCCHHHEEEeCChHHHHHHHHh
Confidence 4689988763 34567888888652 11 1 1 4655 567899999999999988899999999999999999
Q ss_pred Hh-cCCCCeEEEcCCCchhhHHH----HHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCH
Q 014492 165 CV-LDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND 237 (423)
Q Consensus 165 ~l-~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~ 237 (423)
++ +++||+|+++.|+|..+... ++..|++++.+|.+ +++.+|++++++.+. .++++|++++|+||||.+++.
T Consensus 95 ~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~-~~~~~v~~~~~~nptG~~~~~ 173 (390)
T 1elu_A 95 GLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLG-PKTRLVILSHLLWNTGQVLPL 173 (390)
T ss_dssp HSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCC-TTEEEEEEESBCTTTCCBCCH
T ss_pred CCCCCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcC-CCceEEEEeccccCCceecCH
Confidence 98 89999999999999986643 56679999999975 577899999999997 689999999999999999999
Q ss_pred HHHHHHHc----C-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHh----
Q 014492 238 EDLLKILE----M-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA---- 308 (423)
Q Consensus 238 ~~l~~i~~----~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~---- 308 (423)
+++.++|+ . |+++|+||+|..... .. .+...+.++++.|+||.+ .+|.++||+++++++++.+...
T Consensus 174 ~~i~~l~~~~~~~~~~~li~Dea~~~g~~---~~-~~~~~~~d~~~~s~~K~~-~~~~g~G~~~~~~~~~~~~~~~~~g~ 248 (390)
T 1elu_A 174 AEIMAVCRRHQGNYPVRVLVDGAQSAGSL---PL-DFSRLEVDYYAFTGHKWF-AGPAGVGGLYIHGDCLGEINPTYVGW 248 (390)
T ss_dssp HHHHHHHHHCCSSSCCEEEEECTTTBTTB---CC-CTTTSCCSEEEEESSSTT-CCCTTCEEEEECTTTGGGCCCCSCCT
T ss_pred HHHHHHHhhhhhhcCcEEEEEcccccCCc---CC-ChhhcCCCEEEccccccc-cCCCceEEEEECHHhHhhcCCccccC
Confidence 99999999 7 999999999984321 11 122345568999999933 3567799999998887765431
Q ss_pred --------------------cCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeec---CCC
Q 014492 309 --------------------KQPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPY---PSY 362 (423)
Q Consensus 309 --------------------~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~---p~~ 362 (423)
...++.+...+.++..+++. .+++++.+++++++++++.+.|++++++.+. ++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~ 328 (390)
T 1elu_A 249 RSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHVHCLATSAPQ 328 (390)
T ss_dssp TTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTTEEESCSSCCS
T ss_pred CcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhcCCcEEecCcccc
Confidence 12345676777666665543 3457889999999999999999988555554 456
Q ss_pred ceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEe---cChhhHHHHHHHHhhh
Q 014492 363 SNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSV---GKPEHTDALMECLMHL 422 (423)
Q Consensus 363 ~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~---~~~~~~~~l~~al~~l 422 (423)
++|++++++++.+..++.+.|.++||.++++. .++++||++ .+.++++++.++|+++
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~---~~~~iRis~~~~~~~~~i~~~~~~l~~~ 388 (390)
T 1elu_A 329 AGLVSFTVDSPLGHRAIVQKLEEQRIYLRTIA---DPDCIRACCHYITDEEEINHLLARLADF 388 (390)
T ss_dssp SSEEEEEECSSSCHHHHHHHHHHTTEECEEET---TTTEEEEECCTTCCHHHHHHHHHHHTTC
T ss_pred ccEEEEEcCCCCCHHHHHHHHHHCCEEEEecC---CCCeEEEecccCCCHHHHHHHHHHHHhh
Confidence 77887899767788999999999999999876 358999998 4566666666666554
No 85
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=100.00 E-value=1.1e-35 Score=291.49 Aligned_cols=311 Identities=16% Similarity=0.146 Sum_probs=250.3
Q ss_pred CCCCCCCHHHHHHHhcCCCCCCCCCc---chHHHHHHHHHHhCCCCC-cEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCC
Q 014492 104 ENPYGPPPEVREALGQLKFPYIYPDP---ESRRLRAALAKDSGLESD-HILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179 (423)
Q Consensus 104 ~~~~~~~~~v~~al~~~~~~~~Y~~~---g~~~lr~~ia~~~g~~~~-~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~ 179 (423)
.++.+.++++.+++.+... ..|+.. ...++++.+++++|++++ +|++|+|+++++..++.+++++||+|+++.|+
T Consensus 40 ~~~~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~al~~~~~~~~~~gd~Vl~~~~~ 118 (393)
T 1vjo_A 40 PGPSNAHPSVLQAMNVSPV-GHLDPAFLALMDEIQSLLRYVWQTENPLTIAVSGTGTAAMEATIANAVEPGDVVLIGVAG 118 (393)
T ss_dssp SSCCCCCHHHHHHHSSCCC-CTTSHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEESS
T ss_pred CCCCCCCHHHHHHHhcccc-cccCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCchHHHHHHHHHhccCCCCEEEEEcCC
Confidence 4566778999999987433 245432 245788888888999888 99999999999999999999999999999999
Q ss_pred chh--hHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCC
Q 014492 180 FTM--YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAY 256 (423)
Q Consensus 180 y~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay 256 (423)
|.. +...++..|++++.+|.+.++.+|++++++.+.+.++++|++++|+||||.+++.+++.++|+. |+++|+||+|
T Consensus 119 ~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~ 198 (393)
T 1vjo_A 119 YFGNRLVDMAGRYGADVRTISKPWGEVFSLEELRTALETHRPAILALVHAETSTGARQPLEGVGELCREFGTLLLVDTVT 198 (393)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTT
T ss_pred hhHHHHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHhhCCceEEEEeccCCCcceeccHHHHHHHHHHcCCEEEEECCc
Confidence 998 8888899999999999877778999999999973278999999999999999999999999998 9999999999
Q ss_pred ccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHh---------------------cCCC-CC
Q 014492 257 TEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA---------------------KQPY-NV 314 (423)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~---------------------~~~~-~~ 314 (423)
. +...+ . .+...+.++++.|+||.++.+| |+||+++++++++.+... ...+ +.
T Consensus 199 ~-~g~~~--~-~~~~~~~di~~~s~sK~l~~~~-~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 273 (393)
T 1vjo_A 199 S-LGGVP--I-FLDAWGVDLAYSCSQKGLGCSP-GASPFTMSSRAIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTA 273 (393)
T ss_dssp T-TTTSC--C-CTTTTTCSEEECCSSSTTCSCS-SCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCC
T ss_pred c-ccCcC--C-cccccCccEEEEcCcccccCCC-ceEEEEECHHHHHHHhccCCCCCceecCcHhhhhhhccCCCCCCCC
Confidence 9 32211 1 1223456799999999998777 999999999998887532 1223 67
Q ss_pred cHHHHHHHHHHhCCh--HHHHHHHHHHHHHHHHHHHHHccCCCCeecCCC----ceEEEEEeCCCCCHHHHHHHHHhC-C
Q 014492 315 SVAAEVAACAALQNP--IYLEKVKEALIKERERLFKLLKDVPFLNPYPSY----SNFILCEVTSGMDAKKLKDDLAKM-G 387 (423)
Q Consensus 315 ~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~----~~~~~~~~~~~~~~~~l~~~L~~~-g 387 (423)
+.+.+.++..+++.. +++++.+++++++++++.+.|++++ +.+.++. ++++++.++.+.+..++.+.|.++ |
T Consensus 274 ~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 352 (393)
T 1vjo_A 274 PINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDIG-LSLHVEKEYRLPTLTTVCIPDGVDGKAVARRLLNEHN 352 (393)
T ss_dssp CHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCBSSCGGGBCSSEEEEECCTTCCHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcC-CcccCCccccCCcEEEEEcCCCCCHHHHHHHHHhhCC
Confidence 888999888888762 3477889999999999999998874 4443333 367888887677899999999976 9
Q ss_pred cEEEeCCCCCCCCeEEEEe-c--Chh-hHHHHHHHHhh
Q 014492 388 VMIRHYNNKELKGYVRVSV-G--KPE-HTDALMECLMH 421 (423)
Q Consensus 388 I~v~~~~~~~~~~~iRis~-~--~~~-~~~~l~~al~~ 421 (423)
|.++++..+..++++||++ + ..+ +.+++.++|++
T Consensus 353 i~v~~g~~~~~~~~iRis~~~~~~~~~~i~~~~~~l~~ 390 (393)
T 1vjo_A 353 IEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQ 390 (393)
T ss_dssp EECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHH
T ss_pred EEEecCccccCCCEEEEeCCccCChHHHHHHHHHHHHH
Confidence 9999987655678999994 3 333 35566666554
No 86
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=3.2e-35 Score=287.07 Aligned_cols=316 Identities=16% Similarity=0.133 Sum_probs=251.6
Q ss_pred eEcCCCCCCCCCCHHHHHHHhcCCCCCCCCC---cchHHHHHHHHHHhCCC-CCcEEEeCCHHHHHHHHHHHhcCCCCeE
Q 014492 98 VKIDANENPYGPPPEVREALGQLKFPYIYPD---PESRRLRAALAKDSGLE-SDHILVGCGADELIDLIMRCVLDPGDKI 173 (423)
Q Consensus 98 i~l~~~~~~~~~~~~v~~al~~~~~~~~Y~~---~g~~~lr~~ia~~~g~~-~~~i~~t~G~~~al~~~~~~l~~~gd~V 173 (423)
+.++. ..+...++++.+++.+... ..|+. .-..++++.+++++|++ ++++++|+|+++++..++.+++++||+|
T Consensus 21 ~~l~~-~~~~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~v 98 (386)
T 2dr1_A 21 YKLFT-AGPVACFPEVLEIMKVQMF-SHRSKEYRKVHMDTVERLREFLEVEKGEVLLVPSSGTGIMEASIRNGVSKGGKV 98 (386)
T ss_dssp SEECC-SSSCCCCHHHHHHTTSCCC-CTTSHHHHHHHHHHHHHHHHHHTCSSSEEEEESSCHHHHHHHHHHHHSCTTCEE
T ss_pred ceeec-CCCcCCcHHHHHHHhcccc-cccCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHHHhhcCCCeE
Confidence 34443 3345667899999987433 24532 23567888888899987 6789999999999999999999999999
Q ss_pred EEcCCCchh--hHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-CCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCE
Q 014492 174 VDCPPTFTM--YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PIL 249 (423)
Q Consensus 174 l~~~p~y~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~ 249 (423)
+++.|+|.. +...++..|++++.++.+.++.+|++++++.+++ .++++|++++|+||||.+.+.+++.++|+. |++
T Consensus 99 l~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~ 178 (386)
T 2dr1_A 99 LVTIIGAFGKRYKEVVESNGRKAVVLEYEPGKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNPLPELAKVAKEHDKL 178 (386)
T ss_dssp EEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHTTCE
T ss_pred EEEcCCchhHHHHHHHHHhCCceEEEecCCCCCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCCHHHHHHHHHHcCCe
Confidence 999999987 8888889999999999877778999999999953 589999999999999999999999999987 999
Q ss_pred EEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHH----------------H----hc
Q 014492 250 VVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW----------------R----AK 309 (423)
Q Consensus 250 li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~----------------~----~~ 309 (423)
+|+||+|..+..... +...+.++++.|+||.++.++ ++||+++++++++.+. . ..
T Consensus 179 li~D~a~~~~~~~~~----~~~~~~di~~~s~sK~~~~~~-g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (386)
T 2dr1_A 179 VFVDAVSAMGGADIK----FDKWGLDVVFSSSQKAFGVPP-GLAIGAFSERFLEIAEKMPERGWYFDIPLYVKYLKEKES 253 (386)
T ss_dssp EEEECTTTBTTBCCC----TTTTTCSEEEEETTSTTCCCS-SCEEEEECHHHHHHHTTCTTCCSTTCHHHHHHHHHHHSS
T ss_pred EEEEccccccCcccc----ccccCCcEEEEeccccccCCC-ceEEEEECHHHHHHHhcCCCCceEEeHHHHHHhhccCCC
Confidence 999999997653211 223456799999999998652 4899999999887662 1 13
Q ss_pred CCCCCcHHHHHHHHHHhCCh-H--HHHHHHHHHHHHHHHHHHHHccCCCCeecCC----CceEEEEEeCCCCCHHHHHHH
Q 014492 310 QPYNVSVAAEVAACAALQNP-I--YLEKVKEALIKERERLFKLLKDVPFLNPYPS----YSNFILCEVTSGMDAKKLKDD 382 (423)
Q Consensus 310 ~~~~~~~~~~~a~~~~l~~~-~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~----~~~~~~~~~~~~~~~~~l~~~ 382 (423)
..++.+.+.+.++..+|+.. + ++++.+++++++++++.+.|++++ +.+.++ .++++|++++.+.+..++.+.
T Consensus 254 ~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (386)
T 2dr1_A 254 TPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVREIG-LDILAEPGHESPTITAVLTPPGIKGDEVYEA 332 (386)
T ss_dssp CSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CCBSSCTTCBCSSEEEEECCTTCCHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-CeeCcCccccCCceEEEEcCCCCCHHHHHHH
Confidence 34678888998888888652 2 367889999999999999999874 444333 478899999877789999999
Q ss_pred HHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 383 LAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 383 L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
|.++||.++++..+..++++||+++ +.++++++.++|++
T Consensus 333 l~~~gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 374 (386)
T 2dr1_A 333 MRKRGFELAKGYGSVKEKTFRIGHMGYMKFEDIQEMLDNLRE 374 (386)
T ss_dssp HHHTTEECEECCGGGTTTEEEEECCSSCCHHHHHHHHHHHHH
T ss_pred HHHCCeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 9988999999875445689999998 55555666555543
No 87
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=100.00 E-value=2.5e-35 Score=291.15 Aligned_cols=319 Identities=19% Similarity=0.203 Sum_probs=250.0
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhcC-CC--------CCCCCC---cchHHHHHHHHHHhCC-CCCcEEEeCCHHHHHHH
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQL-KF--------PYIYPD---PESRRLRAALAKDSGL-ESDHILVGCGADELIDL 161 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~--------~~~Y~~---~g~~~lr~~ia~~~g~-~~~~i~~t~G~~~al~~ 161 (423)
+++++|+.++++ +.++.+.+++.+. .. .+.|+. .+..++|+++++++|. ++++|++|+|+++++..
T Consensus 27 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~ 105 (420)
T 1t3i_A 27 HPLVYLDNAATS-QKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINARSPREIVYTRNATEAINL 105 (420)
T ss_dssp EECEECBTTTCC-CCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHH
T ss_pred CceEEecCCccC-CCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEcCChHHHHHH
Confidence 357999999988 6778898888752 11 123442 4578899999999998 78899999999999999
Q ss_pred HHHHh----cCCCCeEEEcCCCchh----hHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCc
Q 014492 162 IMRCV----LDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS 233 (423)
Q Consensus 162 ~~~~l----~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~ 233 (423)
++.++ +++||+|+++.|+|+. +...++..|++++.+|.++++.+|++++++++. .++++|++++|+||||.
T Consensus 106 ~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~-~~~~~v~~~~~~nptG~ 184 (420)
T 1t3i_A 106 VAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLLS-EKTKLVTVVHISNTLGC 184 (420)
T ss_dssp HHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCTTSSBCHHHHHHHCC-TTEEEEEEESBCTTTCB
T ss_pred HHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccCCCCCcCHHHHHHhhC-CCceEEEEeCCcccccC
Confidence 99999 8999999999999987 566777889999999987778899999999997 68999999999999999
Q ss_pred CCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC-
Q 014492 234 IINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP- 311 (423)
Q Consensus 234 ~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~- 311 (423)
+++.+++.++|+. |+++|+||+|..+..... .. ..+.++++.|+||.+|.+| +||+++++++++.+......
T Consensus 185 ~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~-~~---~~~~di~~~s~sK~~~~~g--~G~~~~~~~~~~~~~~~~~~~ 258 (420)
T 1t3i_A 185 VNPAEEIAQLAHQAGAKVLVDACQSAPHYPLD-VQ---LIDCDWLVASGHKMCAPTG--IGFLYGKEEILEAMPPFFGGG 258 (420)
T ss_dssp BCCHHHHHHHHHHTTCEEEEECTTTTTTSCCC-HH---HHTCSEEEEEGGGTTSCTT--CEEEEECHHHHHHSCCCSCST
T ss_pred cCCHHHHHHHHHHcCCEEEEEhhhccCCccCc-hh---hcCCCEEEEehhhhcCCCc--eEEEEEchHHHhhcCceecCC
Confidence 9999999999987 999999999986543211 11 2245689999999888777 89999999988877654321
Q ss_pred ---------------------CCCcHHHHHHHHH-HhCCh--HHHHHHHHHHHHHHHHHHHHHccCCCCeec-CC-----
Q 014492 312 ---------------------YNVSVAAEVAACA-ALQNP--IYLEKVKEALIKERERLFKLLKDVPFLNPY-PS----- 361 (423)
Q Consensus 312 ---------------------~~~~~~~~~a~~~-~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~----- 361 (423)
.+.+.+.+.++.. +++.. .++++.+++++++++++.+.|++++++.+. +.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~ 338 (420)
T 1t3i_A 259 EMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKHGD 338 (420)
T ss_dssp TSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCTTEEEESCCGGGSC
T ss_pred CccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCccccc
Confidence 1244455544333 44331 236788889999999999999988656543 32
Q ss_pred CceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC--------CCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492 362 YSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN--------KELKGYVRVSVG---KPEHTDALMECLMHL 422 (423)
Q Consensus 362 ~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~--------~~~~~~iRis~~---~~~~~~~l~~al~~l 422 (423)
.++++++.++ +.+..++.+.|.++||.++++.. .+.++++||+++ +.++++++.++|+++
T Consensus 339 ~~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~g~~~~iRis~~~~~~~~~i~~~~~~l~~~ 409 (420)
T 1t3i_A 339 RAALASFNVA-GLHASDVATMVDQDGIAIRSGHHCTQPLHRLFDASGSARASLYFYNTKEEIDLFLQSLQAT 409 (420)
T ss_dssp BCSEEEEEET-TBCHHHHHHHHHTTTEECBCSCTTCHHHHHHTTCCCCEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred cCCEEEEEEC-CCCHHHHHHHHHHCCeEEeeccccchHHHHhcCCCCeEEEecCCCCCHHHHHHHHHHHHHH
Confidence 3777777887 46788899999999999998743 123689999998 566677777777653
No 88
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=100.00 E-value=3e-35 Score=286.91 Aligned_cols=314 Identities=20% Similarity=0.217 Sum_probs=242.0
Q ss_pred eEcCCCCCCCCCCHHHHHHHhcC-CCCC-------C--C-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh
Q 014492 98 VKIDANENPYGPPPEVREALGQL-KFPY-------I--Y-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV 166 (423)
Q Consensus 98 i~l~~~~~~~~~~~~v~~al~~~-~~~~-------~--Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l 166 (423)
+.|+.+.+. ++++++.+++.+. ...+ . | +..+..++++++++++|+++++|++|+|+++++..+++++
T Consensus 3 ~yld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~ 81 (384)
T 1eg5_A 3 VYFDNNATT-RVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGVSPSEIFFTSCATESINWILKTV 81 (384)
T ss_dssp EECBTTTCC-CCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTSCGGGEEEESCHHHHHHHHHHHH
T ss_pred EEEecCccC-CCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHHhh
Confidence 677777776 6788999888763 2111 0 1 1123578999999999998899999999999999999998
Q ss_pred c----CCCCeEEEcCCCchhhHHHH---HHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHH
Q 014492 167 L----DPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239 (423)
Q Consensus 167 ~----~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~ 239 (423)
+ ++||+|+++.|+|+.+...+ +..|++++.+|.+.++.+|++++++.+. .++++|++++|+||||.+++.++
T Consensus 82 ~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~v~~~~~~nptG~~~~~~~ 160 (384)
T 1eg5_A 82 AETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVD-EDTFLVSIMAANNEVGTIQPVED 160 (384)
T ss_dssp HHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCC-TTEEEEEEESBCTTTCBBCCHHH
T ss_pred hhhccCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCCCCccCHHHHHHHhC-CCCeEEEEECCCCCcccccCHHH
Confidence 7 79999999999998776655 6789999999987778899999999997 58999999999999999999999
Q ss_pred HHHHHcC-C--CEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHH--HHHHHHh-----c
Q 014492 240 LLKILEM-P--ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI--IEYLWRA-----K 309 (423)
Q Consensus 240 l~~i~~~-~--~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~--~~~l~~~-----~ 309 (423)
+.++|+. | ++||+||+|. +...+ . .+...+.++++.|+||.+|++| +||+++++++ ...+... .
T Consensus 161 i~~l~~~~~~~~~li~Dea~~-~~~~~--~-~~~~~~~di~~~s~sK~~g~~G--~G~~~~~~~~~~~~~~~~~~~~~~~ 234 (384)
T 1eg5_A 161 VTRIVKKKNKETLVHVDAVQT-IGKIP--F-SLEKLEVDYASFSAHKFHGPKG--VGITYIRKGVPIRPLIHGGGQERGL 234 (384)
T ss_dssp HHHHHHHHCTTCEEEEECTTT-TTTSC--C-CCTTTCCSEEEEEGGGGTSCTT--CEEEEECTTSCCCCSBCSSCTTTTT
T ss_pred HHHHHHhcCCceEEEEEhhhh-cCCcc--c-CchhcCCCEEEecHHHhcCCCc--eEEEEEcCCCccccccccCcccccc
Confidence 9999987 8 9999999998 22111 1 1222356789999999998888 7999998875 2222111 1
Q ss_pred CCCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeec-CC---CceEEEEEeCCCCCHHHHHHHHH
Q 014492 310 QPYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPY-PS---YSNFILCEVTSGMDAKKLKDDLA 384 (423)
Q Consensus 310 ~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~---~~~~~~~~~~~~~~~~~l~~~L~ 384 (423)
..++.+.+.+.++..+|+. .+++++.+++++++++++.+.|++.+ +.+. +. .+.++++.++ +.+..++.+.|.
T Consensus 235 ~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~ 312 (384)
T 1eg5_A 235 RSGTQNVPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGLMNLG-AHIITPLEISLPNTLSVSFP-NIRGSTLQNLLS 312 (384)
T ss_dssp BCSCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTT-CEECSCTTSBCTTEEEEECT-TCCHHHHHHHHH
T ss_pred cCCCCChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCC-eEEeCCcccCCCCEEEEEeC-CCCHHHHHHHHh
Confidence 2357888899888888876 45678899999999999999998843 4443 22 2457778777 467889999999
Q ss_pred hCCcEEEeCCCCC-------------------CCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 385 KMGVMIRHYNNKE-------------------LKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 385 ~~gI~v~~~~~~~-------------------~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
++||.++++..+. ..+++||+++ +.++++++.++|++
T Consensus 313 ~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 371 (384)
T 1eg5_A 313 GYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEE 371 (384)
T ss_dssp HTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred hCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCCCCHHHHHHHHHHHHH
Confidence 9999999865321 1379999998 56666666666654
No 89
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=100.00 E-value=3.9e-35 Score=287.71 Aligned_cols=316 Identities=16% Similarity=0.156 Sum_probs=247.1
Q ss_pred cCCCCCCCCCCHHHHHHHhcCCCCCCCCC--cchHHHHHHHHHHhCCCCC-cEEEeCCHHHHHHHHHHHhcCCCCeEEEc
Q 014492 100 IDANENPYGPPPEVREALGQLKFPYIYPD--PESRRLRAALAKDSGLESD-HILVGCGADELIDLIMRCVLDPGDKIVDC 176 (423)
Q Consensus 100 l~~~~~~~~~~~~v~~al~~~~~~~~Y~~--~g~~~lr~~ia~~~g~~~~-~i~~t~G~~~al~~~~~~l~~~gd~Vl~~ 176 (423)
+..++++.+.++++.+++.+....+.++. ....++|+++++++|.+++ +|++|+|+++++..++.+++++||+|+++
T Consensus 20 ~~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~ 99 (396)
T 2ch1_A 20 IMMGPGPSNCSKRVLTAMTNTVLSNFHAELFRTMDEVKDGLRYIFQTENRATMCVSGSAHAGMEAMLSNLLEEGDRVLIA 99 (396)
T ss_dssp BCCSSSSCCCCHHHHHHTTSCCCCTTCHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEE
T ss_pred eeecCCCCCCCHHHHHHhccccccCCChhHHHHHHHHHHHHHHHhCCCCCcEEEECCcHHHHHHHHHHHhcCCCCeEEEE
Confidence 34567788889999999987433222232 2378899999999999888 89999999999999999999999999999
Q ss_pred CCCchhhH--HHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEc
Q 014492 177 PPTFTMYE--FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLD 253 (423)
Q Consensus 177 ~p~y~~~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~D 253 (423)
.|+|..+. ..++..|++++.++.+.++.+|++++++.+++.++++|++++|+||||.+++.+++.++|+. |+++|+|
T Consensus 100 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~D 179 (396)
T 2ch1_A 100 VNGIWAERAVEMSERYGADVRTIEGPPDRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVD 179 (396)
T ss_dssp ESSHHHHHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEE
T ss_pred cCCcccHHHHHHHHHcCCceEEecCCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEE
Confidence 99999885 46788999999999877788999999999974379999999999999999999999999987 9999999
Q ss_pred cCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHh-------------------------
Q 014492 254 EAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA------------------------- 308 (423)
Q Consensus 254 eay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~------------------------- 308 (423)
|+|.... .+ . .+...+..+++.|++|.++ ++.++|++++++++++.+...
T Consensus 180 ea~~~g~-~~--~-~~~~~~~d~~~~s~~K~~~-~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (396)
T 2ch1_A 180 AVASLCG-VP--F-YMDKWEIDAVYTGAQKVLG-APPGITPISISPKALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPK 254 (396)
T ss_dssp CTTTBTT-BC--C-CTTTTTCCEEECCCC-CCC-CCSSCEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCC
T ss_pred ccccccC-Cc--c-chhhcCcCEEEEcCCcccc-CCCCeEEEEECHHHHHhhhhccCcccceEechHHHHHhhhhhcccC
Confidence 9998321 11 1 1222333577789999765 344569999999888877531
Q ss_pred cCCCCCcHHHHHHHHHHhCCh--HHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCc-----eEEEEEeCCCCCHHHHHH
Q 014492 309 KQPYNVSVAAEVAACAALQNP--IYLEKVKEALIKERERLFKLLKDVPFLNPYPSYS-----NFILCEVTSGMDAKKLKD 381 (423)
Q Consensus 309 ~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~-----~~~~~~~~~~~~~~~l~~ 381 (423)
...++.+..++.++.++++.. +++++.+++++++++++.+.|++++ +.+.++.+ .+++++++++.+..++.+
T Consensus 255 ~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (396)
T 2ch1_A 255 RYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKMG-LDIFVKDPRHRLPTVTGIMIPKGVDWWKVSQ 333 (396)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHT-CCBSSCSGGGBCTTEEEEECCTTCCHHHHHH
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCC-CeeccCCccccCCceEEEEcCCCCCHHHHHH
Confidence 112457788888888888652 4577889999999999999998874 44444333 488999976778999999
Q ss_pred HHHh-CCcEEEeCCCCCCCCeEEEEe-c---ChhhHHHHHHHHhh
Q 014492 382 DLAK-MGVMIRHYNNKELKGYVRVSV-G---KPEHTDALMECLMH 421 (423)
Q Consensus 382 ~L~~-~gI~v~~~~~~~~~~~iRis~-~---~~~~~~~l~~al~~ 421 (423)
.|.+ +||.++++..+..++++||++ + +.++++++.++|++
T Consensus 334 ~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~ 378 (396)
T 2ch1_A 334 YAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKE 378 (396)
T ss_dssp HHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHH
T ss_pred HHHHhCCEEEecCccccCCCEEEEECCCCcCCHHHHHHHHHHHHH
Confidence 9985 599999876544578999998 4 45566676666654
No 90
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=100.00 E-value=8.8e-35 Score=285.77 Aligned_cols=319 Identities=17% Similarity=0.172 Sum_probs=248.9
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhcC-C-C---CCCC-------CCcchHHHHHHHHHHhCC-CCCcEEEeCCHHHHHHH
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQL-K-F---PYIY-------PDPESRRLRAALAKDSGL-ESDHILVGCGADELIDL 161 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~---~~~Y-------~~~g~~~lr~~ia~~~g~-~~~~i~~t~G~~~al~~ 161 (423)
.++++|+.+.++ +.++++.+++.+. . . .+.| +..+..++|+++++++|. ++++|++|+|+++++..
T Consensus 22 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~ 100 (406)
T 1kmj_A 22 LPLAYLDSAASA-QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEGINL 100 (406)
T ss_dssp EECEECCTTTCC-CCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHH
T ss_pred CceEEecCCccC-CCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEeCChhHHHHH
Confidence 357999999887 5678888888652 1 1 1211 233567899999999998 67899999999999999
Q ss_pred HHHHh----cCCCCeEEEcCCCchh----hHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCc
Q 014492 162 IMRCV----LDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS 233 (423)
Q Consensus 162 ~~~~l----~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~ 233 (423)
++.++ +++||+|+++.|+|+. +...++..|++++.+|.++++.+|++++++.+. .++++|++++|+||||.
T Consensus 101 ~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~~~nptG~ 179 (406)
T 1kmj_A 101 VANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFD-EKTRLLAITHVSNVLGT 179 (406)
T ss_dssp HHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTTSCBCGGGHHHHCC-TTEEEEEEESBCTTTCC
T ss_pred HHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCCCCCcCHHHHHHHhc-cCCeEEEEeCCCccccC
Confidence 99999 8999999999999864 445567789999999987778899999999997 68999999999999999
Q ss_pred CCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC-
Q 014492 234 IINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP- 311 (423)
Q Consensus 234 ~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~- 311 (423)
+++.+++.++|+. |+++|+||+|..+..... +...+.++++.|+||.+|++| +||+++++++++.+......
T Consensus 180 ~~~l~~i~~l~~~~~~~li~D~~~~~g~~~~~----~~~~~~d~~~~s~~K~~g~~G--~G~~~~~~~~~~~~~~~~~~~ 253 (406)
T 1kmj_A 180 ENPLAEMITLAHQHGAKVLVDGAQAVMHHPVD----VQALDCDFYVFSGHKLYGPTG--IGILYVKEALLQEMPPWEGGG 253 (406)
T ss_dssp BCCHHHHHHHHHHTTCEEEEECTTTTTTSCCC----HHHHTCSEEEEEGGGTTSCTT--CEEEEECHHHHHHCCCSSCST
T ss_pred cCCHHHHHHHHHHcCCEEEEEchhhcCCCCCc----ccccCCCEEEEEchhccCCCC--cEEEEEeHHHHhhcCCcccCC
Confidence 9999999999987 999999999986542111 122346689999999998888 89999999988877543311
Q ss_pred ----------------------CCCcHHHHHHHH-HHhCCh--HHHHHHHHHHHHHHHHHHHHHccCCCCeecCC--Cce
Q 014492 312 ----------------------YNVSVAAEVAAC-AALQNP--IYLEKVKEALIKERERLFKLLKDVPFLNPYPS--YSN 364 (423)
Q Consensus 312 ----------------------~~~~~~~~~a~~-~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~--~~~ 364 (423)
.+.+.+.+.++. .+++.. .++++.+++++++++++.+.|++++++.+.++ .++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~ 333 (406)
T 1kmj_A 254 SMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLG 333 (406)
T ss_dssp TSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTSTTEEEESCTTCCS
T ss_pred CceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCcCC
Confidence 123444444433 455432 25678888999999999999999865665444 577
Q ss_pred EEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC--------CCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492 365 FILCEVTSGMDAKKLKDDLAKMGVMIRHYNN--------KELKGYVRVSVG---KPEHTDALMECLMHL 422 (423)
Q Consensus 365 ~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~--------~~~~~~iRis~~---~~~~~~~l~~al~~l 422 (423)
|+++.++ +.+..++.+.|.++||.++++.. .+.++++||+++ +.++++++.++|+++
T Consensus 334 ~~~~~~~-~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~g~~~~iRis~~~~~t~~~i~~~~~~l~~~ 401 (406)
T 1kmj_A 334 VIAFNLG-KHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRI 401 (406)
T ss_dssp EEEEEET-TCCHHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred EEEEEEC-CCCHHHHHHHHhhCCcEEEeccccchHHHHhcCCCCeEEEEeecCCCHHHHHHHHHHHHHH
Confidence 7777886 56788899999999999998763 233689999998 666777787777653
No 91
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=100.00 E-value=4.2e-35 Score=288.19 Aligned_cols=317 Identities=17% Similarity=0.198 Sum_probs=247.9
Q ss_pred CCCCeeEcCCCCCCCC--CCHHHHHHHhcC-C-CC-----CCCC---CcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHH
Q 014492 93 KPEDIVKIDANENPYG--PPPEVREALGQL-K-FP-----YIYP---DPESRRLRAALAKDSGLESDHILVGCGADELID 160 (423)
Q Consensus 93 ~~~~~i~l~~~~~~~~--~~~~v~~al~~~-~-~~-----~~Y~---~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~ 160 (423)
++.++|||+.+ ++++ ++|++.+++.+. . ++ +.|+ ..+..++|+++++++|++ ++|++++| ++++.
T Consensus 43 ~g~~~id~~~~-~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sG-s~a~~ 119 (401)
T 1fc4_A 43 DGSHVINFCAN-NYLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLGME-DAILYSSC-FDANG 119 (401)
T ss_dssp TSCEEEECCCS-CTTSCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHHTCS-EEEEESCH-HHHHH
T ss_pred CCccEEEeecc-CcccccCCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHhCCC-cEEEeCCh-HHHHH
Confidence 45678999998 5676 489998888762 1 11 1232 345789999999999987 67777666 56888
Q ss_pred HHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcC-----CceEEEEcCCCCCcCcCC
Q 014492 161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSII 235 (423)
Q Consensus 161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~ 235 (423)
.++++++++||.|+++.|+|..+...++..|++++.++ ..|++++++.+++. ++++|++++|+||||.++
T Consensus 120 ~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~-----~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~ 194 (401)
T 1fc4_A 120 GLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYA-----NNDMQELEARLKEAREAGARHVLIATDGVFSMDGVIA 194 (401)
T ss_dssp TTHHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEEC-----TTCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEEC
T ss_pred HHHHHHcCCCCEEEEcchhHHHHHHHHHHcCCceEEEC-----CCCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCC
Confidence 89999999999999999999888888888999999998 35789999888631 789999999999999999
Q ss_pred CHHHHHHHHcC-CCEEEEccCCc-cccC-CCch-hhhhc-cCCcEEEEccChhhh-cccCccccccccCHHHHHHHHHhc
Q 014492 236 NDEDLLKILEM-PILVVLDEAYT-EFSG-LESR-MEWVK-KHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYLWRAK 309 (423)
Q Consensus 236 ~~~~l~~i~~~-~~~li~Deay~-~~~~-~~~~-~~~~~-~~~~~i~i~S~SK~~-g~~G~R~G~i~~~~~~~~~l~~~~ 309 (423)
+.+++.++|+. |+++|+||+|+ ++.+ .+.. ....+ ..+.+++++|+||.+ |.+| ||+++++++++.+....
T Consensus 195 ~~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~di~~~s~sK~~~~~~g---G~~~~~~~~~~~l~~~~ 271 (401)
T 1fc4_A 195 NLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGGASG---GYTAARKEVVEWLRQRS 271 (401)
T ss_dssp CHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSSSC---EEEEECHHHHHHHHHHC
T ss_pred CHHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCcCCcEEEecchhhccCCCC---EEEEcCHHHHHHHHHhC
Confidence 99999999987 99999999995 7653 2222 21122 124569999999998 5555 99999999999887654
Q ss_pred C----CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHh
Q 014492 310 Q----PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAK 385 (423)
Q Consensus 310 ~----~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~ 385 (423)
. .++.+.+.+.++.++|+..+..++.+++++++++++.+.|++++ +.+.++.++|+|++++++.+..++.+.|.+
T Consensus 272 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 350 (401)
T 1fc4_A 272 RPYLFSNSLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAAG-FTLAGADHAIIPVMLGDAVVAQKFARELQK 350 (401)
T ss_dssp HHHHHSCCCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTT-CCBCCSSSSEEEEEEECHHHHHHHHHHHHH
T ss_pred cCceeCCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC-CcccCCCCCEEEEEcCChHHHHHHHHHHHH
Confidence 2 34788999999888886533346788899999999999999885 455578899999999754567889999999
Q ss_pred CCcEEEeCCCCC---CCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 386 MGVMIRHYNNKE---LKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 386 ~gI~v~~~~~~~---~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
+||.++++..+. ..+++||+++ +.++++++.++|++
T Consensus 351 ~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 392 (401)
T 1fc4_A 351 EGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTR 392 (401)
T ss_dssp TTEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred CCcEEeeecCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 999999876532 3468999998 56666666666554
No 92
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=100.00 E-value=8.5e-35 Score=280.52 Aligned_cols=307 Identities=15% Similarity=0.128 Sum_probs=239.6
Q ss_pred CCCCCCCHHHHHHHhcCCCCCCCCCc--chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCch
Q 014492 104 ENPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT 181 (423)
Q Consensus 104 ~~~~~~~~~v~~al~~~~~~~~Y~~~--g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~ 181 (423)
.++.++++++.+++.+....+.|+.. ...++|+++++++|+++++|++|+|+++++..++++++++||+|+++.|+|+
T Consensus 7 ~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~ 86 (352)
T 1iug_A 7 PGPVRLHPKALEALARPQLHHRTEAAREVFLKARGLLREAFRTEGEVLILTGSGTLAMEALVKNLFAPGERVLVPVYGKF 86 (352)
T ss_dssp SSSCCCCHHHHHHHHSCCCCTTSHHHHHHHHHHHHHHHHHHTCSSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEECSHH
T ss_pred CCCCCCCHHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHhCCCCceEEEcCchHHHHHHHHHhccCCCCeEEEEeCCch
Confidence 45677889999999874332344432 4678999999999998889999999999999999999999999999999998
Q ss_pred hhH--HHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC---CCEEEEccCC
Q 014492 182 MYE--FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PILVVLDEAY 256 (423)
Q Consensus 182 ~~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~---~~~li~Deay 256 (423)
.+. ..++..|++++.+|.+.++.+|++++++ +++++|++++|+||||.+++.+++.++|+. |+++|+||+|
T Consensus 87 ~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~----~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~~~li~D~a~ 162 (352)
T 1iug_A 87 SERFYEIALEAGLVVERLDYPYGDTPRPEDVAK----EGYAGLLLVHSETSTGALADLPALARAFKEKNPEGLVGADMVT 162 (352)
T ss_dssp HHHHHHHHHHTTCEEEEEECCTTCCCCTTTSCC----SSCSEEEEESEETTTTEECCHHHHHHHHHHHCTTCEEEEECTT
T ss_pred hHHHHHHHHHcCCceEEEeCCCCCCCCHHHHhc----cCCcEEEEEEecCCcceecCHHHHHHHHHhhCCCCEEEEECCc
Confidence 865 4456689999999987777789888876 478999999999999999999999999974 8999999999
Q ss_pred ccccCCCchhhhhccCCcEEEEccChhh-hcccCccccccccCHHHHHH---------HH-------HhcCCCCCcHHHH
Q 014492 257 TEFSGLESRMEWVKKHDNLIVLRTFSKR-AGLAGLRVGYGAFPLSIIEY---------LW-------RAKQPYNVSVAAE 319 (423)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~i~i~S~SK~-~g~~G~R~G~i~~~~~~~~~---------l~-------~~~~~~~~~~~~~ 319 (423)
..... + .. +...+..+++.|+||. +|.+| +||++++++.++. +. .....++.+...+
T Consensus 163 ~~~~~-~--~~-~~~~~~d~~~~s~~K~~~~~~g--~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (352)
T 1iug_A 163 SLLVG-E--VA-LEAMGVDAAASGSQKGLMCPPG--LGFVALSPRALERLKPRGYYLDLARELKAQKEGESAWTPAINLV 236 (352)
T ss_dssp TBTTB-C--CC-SGGGTCSEEEEESSSTTCCCSC--EEEEEECHHHHHTCCCCSSTTCHHHHHHHHTTTCCSSCCCHHHH
T ss_pred cccCc-c--ee-ccccCeeEEEecCcccccCCCc--eeEEEECHHHHHHhhCCCceeeHHHHHhhcccCCCCCCCCHHHH
Confidence 73221 1 11 1122455889999995 44334 7999999987654 22 1122356778888
Q ss_pred HHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCC--CceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC
Q 014492 320 VAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYPS--YSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK 396 (423)
Q Consensus 320 ~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~--~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~ 396 (423)
.++.++++. .+++++.+++++++++++.+.|+++ ++.+.++ .++++|++++++.+..++.+.|.++||.++++..+
T Consensus 237 ~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~ 315 (352)
T 1iug_A 237 LAVAAVLEEVLPRLEEHLALKAWQNALLYGVGEEG-GLRPVPKRFSPAVAAFYLPEGVPYARVKEAFAQRGAVIAGGQGP 315 (352)
T ss_dssp HHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHT-TCEESCSSBCTTCEEEECCTTCCHHHHHHHHHTTTEECEECCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccccccCCeEEEEEcCCCCCHHHHHHHHHHCCEEEEeCCCc
Confidence 777777764 2347888999999999999999987 4555443 67899999986778999999999899999988744
Q ss_pred CCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 397 ELKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 397 ~~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
..++++||+++ +.++++++.++|++
T Consensus 316 ~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 343 (352)
T 1iug_A 316 LKGKVFRLSLMGAYDRYEALGVAGMFRE 343 (352)
T ss_dssp GTTTEEEECCCSSCCHHHHHHHHHHHHH
T ss_pred cCCCEEEEEccccCCHHHHHHHHHHHHH
Confidence 45689999998 45666666666654
No 93
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=100.00 E-value=1.8e-35 Score=290.31 Aligned_cols=317 Identities=16% Similarity=0.168 Sum_probs=246.2
Q ss_pred CCCeeEcCCCCCCC--CCCHHHHHHHhcC----CC---CCCCC--C-cchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492 94 PEDIVKIDANENPY--GPPPEVREALGQL----KF---PYIYP--D-PESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (423)
Q Consensus 94 ~~~~i~l~~~~~~~--~~~~~v~~al~~~----~~---~~~Y~--~-~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~ 161 (423)
+.++|||+.+ +++ .++|++.+++.+. .. ..+|+ . ....++++++++++|.+ ++|++++| ++++..
T Consensus 42 g~~~id~~~~-~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~-~~i~~~sG-t~a~~~ 118 (399)
T 3tqx_A 42 EKEVLNFCAN-NYLGLADHPALIKTAQTVVEQYGFGMASVRFICGTQTIHKELEKDISEFLGTD-DTILYSSC-FDANGG 118 (399)
T ss_dssp TEEEEECSSC-CTTSCTTCHHHHHHHHHHHHHHCSCCCSCCCCCCCBHHHHHHHHHHHHHHTCS-EEEEESCH-HHHHHT
T ss_pred CeeEEEeecc-CcccccCCHHHHHHHHHHHHHhCCCCCCcCccccCchHHHHHHHHHHHHHCCC-cEEEECch-HHHHHH
Confidence 4678999998 444 4578888877652 11 12222 2 24689999999999975 57777666 679999
Q ss_pred HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcC-----CceEEEEcCCCCCcCcCCC
Q 014492 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIIN 236 (423)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~ 236 (423)
++.+++++||.|+++.|+|..+...++..|++++.+|. .|++++++.+++. ++++|++++|+||||.+++
T Consensus 119 ~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~ 193 (399)
T 3tqx_A 119 LFETLLGPEDAIISDELNHASIIDGIRLCKAQRYRYKN-----NAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIAD 193 (399)
T ss_dssp THHHHCCTTCEEEEETTCCHHHHHHHHSCCSEEEEECT-----TCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECC
T ss_pred HHHHhcCCCCEEEECCcccHHHHHHHHHcCCceeEeCC-----CCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCC
Confidence 99999999999999999999999999999999999984 4667888877631 7999999999999999999
Q ss_pred HHHHHHHHcC-CCEEEEccCCccccCCC---chhhhhc-cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC
Q 014492 237 DEDLLKILEM-PILVVLDEAYTEFSGLE---SRMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP 311 (423)
Q Consensus 237 ~~~l~~i~~~-~~~li~Deay~~~~~~~---~~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~ 311 (423)
.+++.++|+. |+++|+||+|.....+. ......+ ..+.+++++|+||.++ |++.||+++++++++.+......
T Consensus 194 l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~--g~~gG~~~~~~~~~~~~~~~~~~ 271 (399)
T 3tqx_A 194 LKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALG--GASGGYTSGHKEIIEWLRNRSRP 271 (399)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSC--SSCCEEEEECHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcc--cCceEEEEcCHHHHHHHHHhCcc
Confidence 9999999987 99999999996332221 1122222 1355699999999987 44559999999999988775432
Q ss_pred ----CCCcHHHHHHHHHHhCCh-HHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhC
Q 014492 312 ----YNVSVAAEVAACAALQNP-IYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKM 386 (423)
Q Consensus 312 ----~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~ 386 (423)
.+.+...+.++..+++.. ++.++.+++++++++++.+.|++++ +.+.++.++|+|+.+++..+..++.+.|.++
T Consensus 272 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 350 (399)
T 3tqx_A 272 YLFSNTVAPVIVATSLKVLELLKTEGPQLRKQLQENSRYFRAGMEKLG-FQLVPGNHPIIPVMLGDAQLATNMADHLLQE 350 (399)
T ss_dssp HHSSCCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHT-CCBCCCSSSEEEEEEECHHHHHHHHHHHHHT
T ss_pred eeccCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcC-CCcCCCCCCEEEEEeCCHHHHHHHHHHHHHC
Confidence 367888888888888765 6678999999999999999999885 4445788899999997655778999999999
Q ss_pred CcEEEeCCC---CCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 387 GVMIRHYNN---KELKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 387 gI~v~~~~~---~~~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
||.++++.. ...++++||+++ +.++++++.++|++
T Consensus 351 gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 391 (399)
T 3tqx_A 351 GIYVVGFSYPVVPMGKARIRVQMSAVHTQQQLDRAIEAFGQ 391 (399)
T ss_dssp TEECCEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred CCEEeeeCCCCCCCCCceEEEEeecCCCHHHHHHHHHHHHH
Confidence 999997654 234579999997 55555555555543
No 94
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=100.00 E-value=3e-34 Score=281.02 Aligned_cols=317 Identities=14% Similarity=0.105 Sum_probs=244.6
Q ss_pred eeEcCCCCCCCCCCHHHHHHHhcCCCCCCCCC--cchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEE
Q 014492 97 IVKIDANENPYGPPPEVREALGQLKFPYIYPD--PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIV 174 (423)
Q Consensus 97 ~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y~~--~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl 174 (423)
.+.|+.+ ++.++++.+.+++.+....+.|+. ....++|+++++++|+++++|++|+|+++++..++++++++||+|+
T Consensus 9 ~~yl~~~-~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~t~g~t~a~~~~~~~~~~~gd~Vl 87 (392)
T 2z9v_A 9 PVITLTA-GPVNAYPEVLRGLGRTVLYDYDPAFQLLYEKVVDKAQKAMRLSNKPVILHGEPVLGLEAAAASLISPDDVVL 87 (392)
T ss_dssp CSEECSS-SCCCCCHHHHHHTTSCCCCTTSHHHHHHHHHHHHHHHHHTTCSSCCEEESSCTHHHHHHHHHHHCCTTCCEE
T ss_pred cceeecC-CCcCCCHHHHHHHhccccccccHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCchHHHHHHHHHhcCCCCEEE
Confidence 3667665 356778999999987433233332 2467899999999999889999999999999999999999999999
Q ss_pred EcCCCchhh--HHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-CCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEE
Q 014492 175 DCPPTFTMY--EFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILV 250 (423)
Q Consensus 175 ~~~p~y~~~--~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~l 250 (423)
++.|+|+.+ ...++..|++++.+|.+.++.+|++++++.+++ .++++|++++|+||||.+++.+++.++|+. |+++
T Consensus 88 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~l 167 (392)
T 2z9v_A 88 NLASGVYGKGFGYWAKRYSPHLLEIEVPYNEAIDPQAVADMLKAHPEITVVSVCHHDTPSGTINPIDAIGALVSAHGAYL 167 (392)
T ss_dssp EEESSHHHHHHHHHHHHHCSCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEEGGGTEECCHHHHHHHHHHTTCEE
T ss_pred EecCCcccHHHHHHHHHcCCceEEeeCCCCCCCCHHHHHHHHhcCCCCcEEEEeccCCCCceeccHHHHHHHHHHcCCeE
Confidence 999999865 344455799999999877777999999999953 579999999999999999999999999987 9999
Q ss_pred EEccCCccccCCCchhhhhccCCcEEEEccChhhh-cccCccccccccCHHHHHHHHHhc--------------------
Q 014492 251 VLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYLWRAK-------------------- 309 (423)
Q Consensus 251 i~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~-g~~G~R~G~i~~~~~~~~~l~~~~-------------------- 309 (423)
|+||+|..... + .. +...+..+++.|+||.+ |.+| +||+++++++++.+....
T Consensus 168 i~D~a~~~g~~-~--~~-~~~~~~d~~~~s~sK~~~~~~g--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~ 241 (392)
T 2z9v_A 168 IVDAVSSFGGM-K--TH-PEDCKADIYVTGPNKCLGAPPG--LTMMGVSERAWAKMKANPLAPRASMLSIVDWENAWSRD 241 (392)
T ss_dssp EEECTTTBTTB-S--CC-GGGGTCSEEEECSSSTTCCCSC--CEEEEECHHHHHHHHTCTTSCCSSTTCSGGGTTTTSTT
T ss_pred EEEcccccCCc-c--cc-cccccceEEEecCcccccCCCc--eeEEEECHHHHHHhhhccCCCCceeccHHHHHhhhccc
Confidence 99999984221 1 11 12234558899999954 4455 599999999988876421
Q ss_pred --CCCCCcHHHHHHHHHHhCC-hHH-HHHHHHHHHHHHHHHHHHHccCCCCeecC-C----CceEEEEEeCCCCCHHHHH
Q 014492 310 --QPYNVSVAAEVAACAALQN-PIY-LEKVKEALIKERERLFKLLKDVPFLNPYP-S----YSNFILCEVTSGMDAKKLK 380 (423)
Q Consensus 310 --~~~~~~~~~~~a~~~~l~~-~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~p-~----~~~~~~~~~~~~~~~~~l~ 380 (423)
..++.+...+.++..+++. .++ +++.+++++++++++.+.|++++ +.+.+ . .+++++++++++.+..++.
T Consensus 242 ~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 320 (392)
T 2z9v_A 242 KPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTAMG-LSVWAASDSIASPTTTAVRTPDGVDEKALR 320 (392)
T ss_dssp SCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCBSSSSGGGBCTTEEEEECCTTCCHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHcC-CeeccCCccccCCceEEEECCCCCCHHHHH
Confidence 1234566777766667654 233 67888999999999999998874 44433 3 4678899997677889999
Q ss_pred HHHHhC-CcEEEeCCCCCCCCeEEEEe-c---ChhhHHHHHHHHhh
Q 014492 381 DDLAKM-GVMIRHYNNKELKGYVRVSV-G---KPEHTDALMECLMH 421 (423)
Q Consensus 381 ~~L~~~-gI~v~~~~~~~~~~~iRis~-~---~~~~~~~l~~al~~ 421 (423)
+.|.++ ||.++++..+..++++||++ + +.++++++.++|++
T Consensus 321 ~~L~~~~gi~v~~g~~~~~~~~lRi~~~~~~~~~~~i~~~~~~l~~ 366 (392)
T 2z9v_A 321 QAARARYGVVFSSGRGETLGKLTRIGHMGPTAQPIYAIAALTALGG 366 (392)
T ss_dssp HHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHH
T ss_pred HHHHhcCCEEEecCCCCCCCCeEEEeCcccccCHHHHHHHHHHHHH
Confidence 999976 99999887545578999994 5 55566666665553
No 95
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=100.00 E-value=3.2e-34 Score=277.70 Aligned_cols=315 Identities=10% Similarity=0.033 Sum_probs=245.6
Q ss_pred eeEcCCCCCCCCCCHHHHHHHhcCCCCCCCCC---cchHHHHHHHHHHhCCC--CCcEEEeCCHHHHHHHHHHHhcCCCC
Q 014492 97 IVKIDANENPYGPPPEVREALGQLKFPYIYPD---PESRRLRAALAKDSGLE--SDHILVGCGADELIDLIMRCVLDPGD 171 (423)
Q Consensus 97 ~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y~~---~g~~~lr~~ia~~~g~~--~~~i~~t~G~~~al~~~~~~l~~~gd 171 (423)
+++|+.| +++++|++.+++.+. ..+.|+. .+..++|+++++++|.+ ++++++|+|+++++..++++++++||
T Consensus 5 ~~~~~~g--p~~~~~~v~~a~~~~-~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd 81 (366)
T 1m32_A 5 YLLLTPG--PLTTSRTVKEAMLFD-SCTWDDDYNIGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSALGPQD 81 (366)
T ss_dssp CEECSSS--SCCCCHHHHHTTCCC-CCTTSHHHHTTTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHHHHHSCCTTC
T ss_pred cccccCC--CcCCCHHHHHHHhhh-hcCCCHHHHHHHHHHHHHHHHHHhCCCCcCcEEEEecChHHHHHHHHHHhcCCCC
Confidence 5788777 567889999999874 2244543 56789999999999932 24799999999999999999999999
Q ss_pred eEEEcC-CCchh-hHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcC-CceEEEEcCCCCCcCcCCCHHHHHHHHcC-C
Q 014492 172 KIVDCP-PTFTM-YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-KPKCIFLTSPNNPDGSIINDEDLLKILEM-P 247 (423)
Q Consensus 172 ~Vl~~~-p~y~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~ 247 (423)
+|++.+ ++|+. +...++..|++++.+|.+.++.+|++++++.+++. ++++|++++|+||||.+++.+++.++|+. |
T Consensus 82 ~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~ 161 (366)
T 1m32_A 82 KVLIVSNGAYGARMVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNADPTISHIAMVHSETTTGMLNPIDEVGALAHRYG 161 (366)
T ss_dssp CEEEEESSHHHHHHHHHHHHHTCCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHHT
T ss_pred eEEEEeCCCccHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCCeEEEEEecccCCcceecCHHHHHHHHHHcC
Confidence 987765 66654 66677788999999998777789999999999753 68999999999999999999999999998 9
Q ss_pred CEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhc------------------
Q 014492 248 ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK------------------ 309 (423)
Q Consensus 248 ~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~------------------ 309 (423)
+++|+||+|..+..... +...+.++++.|+||.++ .+.++||+++++++++.+....
T Consensus 162 ~~li~Dea~~~~~~~~~----~~~~~~di~~~s~~K~~~-~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (366)
T 1m32_A 162 KTYIVDAMSSFGGIPMD----IAALHIDYLISSANKCIQ-GVPGFAFVIAREQKLAACKGHSRSLSLDLYAQWRCMEDNH 236 (366)
T ss_dssp CEEEEECTTTTTTSCCC----TTTTTCSEEEEESSSTTC-CCSSEEEEEEEHHHHTTCTTCCSCSTTCHHHHHHHHHHTT
T ss_pred CEEEEECCccccCcCcc----ccccCccEEEecCccccc-CCCceEEEEECHHHHHhhcCCCCCccccHHHHHhhhcccC
Confidence 99999999985432111 222345689999999763 2344799999998876554321
Q ss_pred --CCCCCcHHHHHHHHHHhCCh-HH--HHHHHHHHHHHHHHHHHHHccCCCCeec-C---CCceEEEEEeCC--CCCHHH
Q 014492 310 --QPYNVSVAAEVAACAALQNP-IY--LEKVKEALIKERERLFKLLKDVPFLNPY-P---SYSNFILCEVTS--GMDAKK 378 (423)
Q Consensus 310 --~~~~~~~~~~~a~~~~l~~~-~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p---~~~~~~~~~~~~--~~~~~~ 378 (423)
..++.+..++.++.++++.. ++ +++.+++++++++++.+.|++++ +.+. + ..++++|+++++ +.+..+
T Consensus 237 ~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (366)
T 1m32_A 237 GKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRALG-FNTLLDDELHSPIITAFYSPEDPQYRFSE 315 (366)
T ss_dssp TCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTT-CCBSSCGGGBCSSEEEEECCCCTTCCHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHCC-CeeccCchhcCceEEEEEcCccCCCCHHH
Confidence 12567788887777777652 33 67788999999999999998874 4433 2 245689999986 678899
Q ss_pred HHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 379 LKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 379 l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
+.+.|.++||.++++..+ ..+++||+++ +.++++++.++|++
T Consensus 316 ~~~~l~~~gi~v~~~~~~-~~~~iRi~~~~~~~~~~i~~~~~~l~~ 360 (366)
T 1m32_A 316 FYRRLKEQGFVIYPGKVS-QSDCFRIGNIGEVYAADITALLTAIRT 360 (366)
T ss_dssp HHHHHHHTTEECEECCCS-SSCEEEEECCSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHCCEEEECCcCC-CCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence 999999999999987654 4689999998 56666666666654
No 96
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=100.00 E-value=4.7e-34 Score=278.46 Aligned_cols=310 Identities=13% Similarity=0.067 Sum_probs=242.9
Q ss_pred CCCCCCCCHHHHHHHhcCCCCCCCC--CcchHHHHHHHHHHhCCCC--CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCC
Q 014492 103 NENPYGPPPEVREALGQLKFPYIYP--DPESRRLRAALAKDSGLES--DHILVGCGADELIDLIMRCVLDPGDKIVDCPP 178 (423)
Q Consensus 103 ~~~~~~~~~~v~~al~~~~~~~~Y~--~~g~~~lr~~ia~~~g~~~--~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p 178 (423)
+..+.++++++.+++.+....+.++ .....++++++++++|+++ ++|++|+|+++++. ++..++++||+|+++.|
T Consensus 7 ~~gp~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~v~~~~g~t~al~-~~~~~~~~gd~vi~~~~ 85 (384)
T 3zrp_A 7 HVGPTTIKEDVLVAGLENNVGFTSKEFVEALAYSLKGLRYVMGASKNYQPLIIPGGGTSAME-SVTSLLKPNDKILVVSN 85 (384)
T ss_dssp CSSCSCCCHHHHHHTTCCSCCTTSHHHHHHHHHHHHHHHHHHTCCTTSEEEEEESCHHHHHH-HGGGGCCTTCEEEEECS
T ss_pred cCCCCCCCHHHHHHhhccccccccHHHHHHHHHHHHHHHHHhCCCCCCcEEEEcCCcHHHHH-HHHhhcCCCCEEEEecC
Confidence 3456777899999998743222222 2246789999999999987 89999999999999 99989999999999999
Q ss_pred Cchh--hHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccC
Q 014492 179 TFTM--YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEA 255 (423)
Q Consensus 179 ~y~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Dea 255 (423)
+|.. +...++..|++++.+|.+.++.+|++++++.+.+.++++|++++|+||||.+++.+++.++|+. |+++|+|++
T Consensus 86 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a 165 (384)
T 3zrp_A 86 GVFGDRWEQIFKRYPVNVKVLRPSPGDYVKPGEVEEEVRKSEYKLVALTHVETSTGVREPVKDVINKIRKYVELIVVDGV 165 (384)
T ss_dssp SHHHHHHHHHHTTSSCEEEEECCSTTCCCCHHHHHHHHHHSCEEEEEEESEETTTTEECCHHHHHHHHGGGEEEEEEECT
T ss_pred CcchHHHHHHHHHcCCcEEEecCCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCCceECcHHHHHHHHHhcCCEEEEECc
Confidence 9965 5566677899999999887888999999999986589999999999999999999999999998 999999999
Q ss_pred CccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHH-------------HH-----------hcCC
Q 014492 256 YTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYL-------------WR-----------AKQP 311 (423)
Q Consensus 256 y~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l-------------~~-----------~~~~ 311 (423)
|....... .....+.++++.|+||.++ ++.++||+++++++++.+ .. ....
T Consensus 166 ~~~~~~~~----~~~~~~~d~~~~s~~K~~~-~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (384)
T 3zrp_A 166 SSVGAEEV----KAEEWNVDVYLTASQKALG-SAAGLGLLLLSPKALSILDSQNSIAGYYLDLRNWLPVMRGAEEGKAAY 240 (384)
T ss_dssp TTTTTSCC----CTTTTTCSEEEEETTSTTC-CCSSEEEEEECHHHHHHHHHCCCSCCSTTCHHHHHHHHHHHHTTCCCC
T ss_pred ccccCccc----cccccCCCEEEecCccccc-CCCceEEEEECHHHHHHhcCCCCCCcccccHHHHHHHHHhhcccCCCc
Confidence 98543211 1123345689999999875 334589999999988777 11 1222
Q ss_pred C-CCcHHHHHHHHHHhCC-h-HHHHHHHHHHHHHHHHHHHHHccCCCCeecCC-----CceEEEEEeCCCCCHHHHHHHH
Q 014492 312 Y-NVSVAAEVAACAALQN-P-IYLEKVKEALIKERERLFKLLKDVPFLNPYPS-----YSNFILCEVTSGMDAKKLKDDL 383 (423)
Q Consensus 312 ~-~~~~~~~~a~~~~l~~-~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~-----~~~~~~~~~~~~~~~~~l~~~L 383 (423)
+ +.+...+.++..+++. . ..+++.+++++++++++.+.|++++ +.+.+. .++++++.+++ .+..++.+.|
T Consensus 241 ~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l 318 (384)
T 3zrp_A 241 FATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEALG-LEIVARRPESYSNTVTGVILKV-ADPQKVLAGT 318 (384)
T ss_dssp SSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCBSCSSGGGBCSSEEEEECSS-SCHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHCC-CeEccCcccccCccEEEEECCC-CCHHHHHHHH
Confidence 3 5677777766666654 2 2367889999999999999999884 444433 36788899985 7899999999
Q ss_pred HhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 384 AKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 384 ~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
.++||.++++..... +++||++. +.++++++.++|++
T Consensus 319 ~~~gi~v~~g~~~~~-~~iRi~~~~~~~~e~i~~~~~~l~~ 358 (384)
T 3zrp_A 319 VNEGVEFAPGVHPAF-KYFRIGHMGWVTPNDAIIAISVIER 358 (384)
T ss_dssp HTTTCCCEECCCTTC-CEEEEECCSSCCHHHHHHHHHHHHH
T ss_pred HHCCEEEecCCCCCc-CEEEEeccccCCHHHHHHHHHHHHH
Confidence 988999998774323 89999987 55666666666654
No 97
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.7e-34 Score=284.19 Aligned_cols=317 Identities=15% Similarity=0.126 Sum_probs=244.6
Q ss_pred CeeEcCCCCCCCCCCHHHHHHHhcC-CC----C-CCCC-----CcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHH
Q 014492 96 DIVKIDANENPYGPPPEVREALGQL-KF----P-YIYP-----DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (423)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~-~~----~-~~Y~-----~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~ 164 (423)
+.++|+.+.+. ++++++.+++.+. .. . ..|+ .....++|+++++++|+++++|++|+|+++++.+++.
T Consensus 26 ~~~~ld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~~~~ 104 (406)
T 3cai_A 26 GWVHFDAPAGM-LIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLVNADPGGVVLGADRAVLLSLLAE 104 (406)
T ss_dssp SCEECBGGGCC-CCCHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHHH
T ss_pred CeEEEeCCCcC-CCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCChHHHHHHHHH
Confidence 46899988877 6788888888752 11 1 1242 2346789999999999988999999999999999999
Q ss_pred Hh---cCCCCeEEEcCCCchhhHHHHH----HCCCeEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCC
Q 014492 165 CV---LDPGDKIVDCPPTFTMYEFDAA----VNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236 (423)
Q Consensus 165 ~l---~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~ 236 (423)
++ +++||+|+++.|+|..+...+. ..|++++.+|.+ +++.+|++++++.++ +++++|++++|+||||.+++
T Consensus 105 ~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~~~nptG~~~~ 183 (406)
T 3cai_A 105 ASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIETGELPTWQWESLIS-KSTRLVAVNSASGTLGGVTD 183 (406)
T ss_dssp HTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCTTTCCCCGGGHHHHCC-TTEEEEEEESBCTTTCBBCC
T ss_pred HHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCcccCCcCHHHHHHHhC-CCceEEEEeCCcCCccccCC
Confidence 87 7899999999999986544433 379999999976 667889999999997 68999999999999999999
Q ss_pred HHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCcccc-ccccCHHHHHHHHHhcC----
Q 014492 237 DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVG-YGAFPLSIIEYLWRAKQ---- 310 (423)
Q Consensus 237 ~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G-~i~~~~~~~~~l~~~~~---- 310 (423)
.+++.++|+. |+++|+|++|........ .. ..+.++++.|+||.+| ++ +| |+++++++++++.....
T Consensus 184 l~~i~~l~~~~~~~li~D~a~~~g~~~~~-~~---~~~~d~~~~s~~K~~g-~~--~G~~~~~~~~~~~~l~~~~~~~~~ 256 (406)
T 3cai_A 184 LRAMTKLVHDVGALVVVDHSAAAPYRLLD-IR---ETDADVVTVNAHAWGG-PP--IGAMVFRDPSVMNSFGSVSTNPYA 256 (406)
T ss_dssp CHHHHHHHHHTTCEEEEECTTTTTTCCCC-HH---HHCCSEEEEEGGGGTS-CS--CEEEEESCHHHHHTSCCCCSCTTC
T ss_pred HHHHHHHHHHcCCEEEEEcccccCCCCCC-ch---hcCCCEEEeehhhhcC-CC--cCeEEEEehHHHhhcCCcccCCCC
Confidence 9999999987 999999999984322111 11 2245688999999776 44 89 99999988877654421
Q ss_pred -------CCCCcHHHHHHHHHHhCCh-H---------------HHHHHHHHHHHHHHHHHHHHccCCCCeecCC---Cce
Q 014492 311 -------PYNVSVAAEVAACAALQNP-I---------------YLEKVKEALIKERERLFKLLKDVPFLNPYPS---YSN 364 (423)
Q Consensus 311 -------~~~~~~~~~~a~~~~l~~~-~---------------~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~---~~~ 364 (423)
.++.+...+.++..+++.. + ++++.+++++++++++.+.|++++++.+.++ .++
T Consensus 257 ~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~ 336 (406)
T 3cai_A 257 TGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLPLVMLIGRPEAQIP 336 (406)
T ss_dssp CGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECCCCSSBCS
T ss_pred CccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCccccCC
Confidence 3456666665555555421 1 5788899999999999999998866655433 255
Q ss_pred EEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC---------CCCCCeEEEEecC---hhhHHHHHHHHhhh
Q 014492 365 FILCEVTSGMDAKKLKDDLAKMGVMIRHYNN---------KELKGYVRVSVGK---PEHTDALMECLMHL 422 (423)
Q Consensus 365 ~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~---------~~~~~~iRis~~~---~~~~~~l~~al~~l 422 (423)
++++.++ +.+..++.+.|.++||.++++.. ....+++||+++. .++++++.++|+++
T Consensus 337 ~~~~~~~-~~~~~~~~~~L~~~gi~v~~g~~~~~~~~~g~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~ 405 (406)
T 3cai_A 337 VVSFAVH-KVPADRVVQRLADNGILAIANTGSRVLDVLGVNDVGGAVTVGLAHYSTMAEVDQLVRALASL 405 (406)
T ss_dssp EEEEEET-TBCHHHHHHHHHHTTEECEECCSCHHHHHHTTTTTTCCEEEECCTTCCHHHHHHHHHHHHTC
T ss_pred EEEEEEC-CcCHHHHHHHHHHCCcEEecCChHHHHHHcCCCCCCCeEEEEeecCCCHHHHHHHHHHHHHh
Confidence 7888887 46788999999999999998761 1235899999984 66677777777654
No 98
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=100.00 E-value=9.7e-36 Score=289.36 Aligned_cols=313 Identities=15% Similarity=0.136 Sum_probs=242.2
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhcC-CCC----------CCC-CCcchHHHHHH-HHHHhCCCCCcEEEeCCHHHHHHH
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQL-KFP----------YIY-PDPESRRLRAA-LAKDSGLESDHILVGCGADELIDL 161 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~~----------~~Y-~~~g~~~lr~~-ia~~~g~~~~~i~~t~G~~~al~~ 161 (423)
+++++|+.+.+..++++++.+++.+. ... ..| +..+..+++++ +++++|.+ +|++|+|+++++..
T Consensus 7 ~~~i~ld~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~~~~--~v~~~~g~t~a~~~ 84 (371)
T 2e7j_A 7 KDFINIDPLQTGGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLGCD--VARVTNGAREAKFA 84 (371)
T ss_dssp -CCEECCHHHHTCCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTTSS--EEEEESSHHHHHHH
T ss_pred CCcEEecccccCCCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHcCCC--EEEEeCChHHHHHH
Confidence 45789998777777889999999873 211 112 55678999999 99999986 99999999999999
Q ss_pred HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEec--CCCCCCCCHHHHHHHhhc----CCceEEEEcCCCCCcCcCC
Q 014492 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAVER----EKPKCIFLTSPNNPDGSII 235 (423)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~--~~~~~~~d~~~l~~~i~~----~~~~~i~l~~p~NPtG~~~ 235 (423)
++.+++++||+|+++.|+|..+...++..|++++.+| .++++.+|++++++.+++ +++++|++++|+||||.++
T Consensus 85 ~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~~~~nptG~~~ 164 (371)
T 2e7j_A 85 VMHSLAKKDAWVVMDENCHYSSYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLP 164 (371)
T ss_dssp HHHHHCCTTCEEEEETTCCHHHHHHHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCC
T ss_pred HHHHHhCCCCEEEEccCcchHHHHHHHHcCCeEEEeecccCCCCCcCHHHHHHHHHhhcccCCeEEEEEECCCCCCcccC
Confidence 9999999999999999999999988999999999999 777789999999999963 5789999999999999999
Q ss_pred CHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHH-HHHhcC---
Q 014492 236 NDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY-LWRAKQ--- 310 (423)
Q Consensus 236 ~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~-l~~~~~--- 310 (423)
+.+++.++|+. |+++|+||+|..+..... .. ..+..+++.|+||.++. |.|+||+++++++++. +.....
T Consensus 165 ~~~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~---~~~~di~~~s~sK~~~~-~~~~G~~~~~~~~~~~~~~~~~~~~~ 239 (371)
T 2e7j_A 165 DVKKIAKVCSEYDVPLLVNGAYAIGRMPVS-LK---EIGADFIVGSGHKSMAA-SGPIGVMGMKEEWAEIVLRRSEKYKN 239 (371)
T ss_dssp CHHHHHHHHHTTTCCEEEECTTTBTTBCCC-HH---HHTCSEEEEEHHHHSSC-CSSCEEEEECTTTTTTTTCBCSSCTT
T ss_pred CHHHHHHHHHHcCCeEEEECccccCCCCCC-hh---hcCCCEEEecCCcCCCC-CCCcEEEEEechhhhhhccccccCcc
Confidence 99999999998 999999999997654211 11 12344899999999874 4599999999988776 654433
Q ss_pred ------CCCCcHHHHHHHHHHhCChHHHHHHHHHH--HHHHHHHHHHHccCCCCeec-CC--CceEEEEEeCCCCCHHHH
Q 014492 311 ------PYNVSVAAEVAACAALQNPIYLEKVKEAL--IKERERLFKLLKDVPFLNPY-PS--YSNFILCEVTSGMDAKKL 379 (423)
Q Consensus 311 ------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~--~~~~~~l~~~L~~~~~~~~~-p~--~~~~~~~~~~~~~~~~~l 379 (423)
.++.+...+.++..+++..+. +..+++ +++++++.+.|+++ ++.+. +. .++++|++++ +..++
T Consensus 240 ~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~ 313 (371)
T 2e7j_A 240 KEVELLGCTARGATIITLMASFPHVRE--RIKRWDEEVEKARRFAAEMEKL-GIKQLGDNPHNHDLMFFHAE---VLYEI 313 (371)
T ss_dssp SBGGGTTCCCCSHHHHHHHHHHHHHHH--HGGGHHHHHHHHHHHHHHHHHT-TCEEESSSSCCSSEEEEECH---HHHHH
T ss_pred cccccccCCcCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHc-CcEEecCCCccCceEEEECC---CHHHH
Confidence 345566666666666643221 566777 88999999999887 45543 32 4779999986 67889
Q ss_pred HHHHHhCCcEEEeCCCC-----C-CCCeEE-EEecC----hhhHHHHHHHHhh
Q 014492 380 KDDLAKMGVMIRHYNNK-----E-LKGYVR-VSVGK----PEHTDALMECLMH 421 (423)
Q Consensus 380 ~~~L~~~gI~v~~~~~~-----~-~~~~iR-is~~~----~~~~~~l~~al~~ 421 (423)
.+.|.++||.+.+ ..+ + .++++| |+++. .++++++.++|++
T Consensus 314 ~~~l~~~gi~~~~-~~~~~~~~g~~~~~iRii~~~~~~~~~~~i~~~~~~l~~ 365 (371)
T 2e7j_A 314 SKKAKGGRFFLYR-ELKSRKIHGIKPGLTRYFKLSTYGLSDEEVDYVLNAFKE 365 (371)
T ss_dssp HHHSSSGGGHHHH-HHHHTTEECSCTTCCSEEEEECTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHCCEEEEe-ccccccccCCCCCceEEEEeeccCCCHHHHHHHHHHHHH
Confidence 9998899999987 321 1 168999 99873 4455555555543
No 99
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=100.00 E-value=7.5e-34 Score=279.83 Aligned_cols=313 Identities=14% Similarity=0.047 Sum_probs=246.5
Q ss_pred CCCCCCCHHHHHHHhcCCCCCCCCCc--chHHHHHHHHHHhCCCCCc-EEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCc
Q 014492 104 ENPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLESDH-ILVGCGADELIDLIMRCVLDPGDKIVDCPPTF 180 (423)
Q Consensus 104 ~~~~~~~~~v~~al~~~~~~~~Y~~~--g~~~lr~~ia~~~g~~~~~-i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y 180 (423)
..|.++++++.+++.+....+.++.. ...++++.+++++|.+.++ +++++|+++++..++..++++||+|+++.|+|
T Consensus 19 pgp~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~sgt~al~~~~~~~~~~gd~Vl~~~~~~ 98 (411)
T 3nnk_A 19 PGPINADPRVLRAMSSQLIGQYDPAMTHYMNEVMALYRGVFRTENRWTMLVDGTSRAGIEAILVSAIRPGDKVLVPVFGR 98 (411)
T ss_dssp SSCCCCCHHHHHHHTSCCCCTTCHHHHHHHHHHHHHHHHHHTCCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEECSH
T ss_pred CCCCCCCHHHHHHhhccccccccHHHHHHHHHHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHHHhcCCCCEEEEecCCc
Confidence 46778889999999874332333321 2578999999999987765 88899999999999999999999999999999
Q ss_pred hh--hHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCc
Q 014492 181 TM--YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYT 257 (423)
Q Consensus 181 ~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~ 257 (423)
.. +...++..|++++.+|.+.++.+|++++++.+.+.++++|++++|+||||.+.+.+++.++|+. |+++|+||+|.
T Consensus 99 ~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~ 178 (411)
T 3nnk_A 99 FGHLLCEIARRCRAEVHTIEVPWGEVFTPDQVEDAVKRIRPRLLLTVQGDTSTTMLQPLAELGEICRRYDALFYTDATAS 178 (411)
T ss_dssp HHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTT
T ss_pred hHHHHHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHhhCCCeEEEEeCCCCCcceeccHHHHHHHHHHcCCEEEEECCcc
Confidence 76 8888889999999999888888999999999974589999999999999999999999999997 99999999987
Q ss_pred cccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhc----------------------------
Q 014492 258 EFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK---------------------------- 309 (423)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~---------------------------- 309 (423)
..... ......+.++++.|++|.++ ++.++||+++++++++.+....
T Consensus 179 ~~~~~----~~~~~~~~d~~~~s~~K~l~-~~~g~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~ 253 (411)
T 3nnk_A 179 LGGNP----LETDVWGLDAVSAGMQKCLG-GPSGTSPITLSARMEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGM 253 (411)
T ss_dssp BTTBC----CCTTTTTCSEEECCSTTTTC-CCSSEEEEEECHHHHHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHH
T ss_pred cCCcc----cchhccCCcEEEecCccccC-CCCceEEEEECHHHHHHHhhcccccccccccccccccCCCCcccccchHH
Confidence 43211 11122345689999999743 3446899999999998887643
Q ss_pred ----------CCCCCcHHHHHHHHHHhCC-hHH-HHHHHHHHHHHHHHHHHHHccCCCCeecCC---CceEEEEEeCCCC
Q 014492 310 ----------QPYNVSVAAEVAACAALQN-PIY-LEKVKEALIKERERLFKLLKDVPFLNPYPS---YSNFILCEVTSGM 374 (423)
Q Consensus 310 ----------~~~~~~~~~~~a~~~~l~~-~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~---~~~~~~~~~~~~~ 374 (423)
..++.+..++.++..+++. .++ +++.+++++++++++.+.|++++.....+. .++++++.+|++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~ 333 (411)
T 3nnk_A 254 VMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGIARHKLHGDALVKGIQAMGLETFGDLKHKMNNVLGVVIPQGI 333 (411)
T ss_dssp HHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBCSCGGGBCSSEEEEECCTTC
T ss_pred HHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCEeCCCcccccccEEEEECCCCC
Confidence 1245677777777777764 233 788899999999999999998753222232 3678899998778
Q ss_pred CHHHHHHHHHhC-CcEEEeCCCCCCCCeEEEEe-c---ChhhHHHHHHHHhh
Q 014492 375 DAKKLKDDLAKM-GVMIRHYNNKELKGYVRVSV-G---KPEHTDALMECLMH 421 (423)
Q Consensus 375 ~~~~l~~~L~~~-gI~v~~~~~~~~~~~iRis~-~---~~~~~~~l~~al~~ 421 (423)
+..++.+.|.++ ||.++++.....++++||++ + +.++++++.++|++
T Consensus 334 ~~~~l~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~ 385 (411)
T 3nnk_A 334 NGDQARKLMLEDFGIEIGTSFGPLHGKVWRIGTMGYNARKDCVMTTLSALEA 385 (411)
T ss_dssp CHHHHHHHHHHHHSEEEEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhcCeEEeCccCCCCCCEEEEeCccCcCCHHHHHHHHHHHHH
Confidence 899999999865 99999875544568999998 5 34556666665554
No 100
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=100.00 E-value=2.8e-34 Score=276.74 Aligned_cols=310 Identities=16% Similarity=0.080 Sum_probs=241.4
Q ss_pred CCCCCCCCHHHHHHHhcCCCCCCCCCc--chHHHHHHHHHHhCCC--CCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCC
Q 014492 103 NENPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLE--SDHILVGCGADELIDLIMRCVLDPGDKIVDCPP 178 (423)
Q Consensus 103 ~~~~~~~~~~v~~al~~~~~~~~Y~~~--g~~~lr~~ia~~~g~~--~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p 178 (423)
+.+++++++++.+++.+....+.|+.. ...++|+++++++|++ +++|++|+|+++++..+++.+++ |+|+++.|
T Consensus 5 ~~gp~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~--d~vl~~~~ 82 (353)
T 2yrr_A 5 TPGPTPIPERVQKALLRPMRGHLDPEVLRVNRAIQERLAALFDPGEGALVAALAGSGSLGMEAGLANLDR--GPVLVLVN 82 (353)
T ss_dssp SSSSCCCCHHHHGGGGSCCCCTTCHHHHHHHHHHHHHHHHHHCCCTTCEEEEESSCHHHHHHHHHHTCSC--CCEEEEEC
T ss_pred CCCCCCCCHHHHHHHhcccccccCHHHHHHHHHHHHHHHHHhCCCCCCceEEEcCCcHHHHHHHHHHhcC--CcEEEEcC
Confidence 346677889999999874332455432 4789999999999985 67899999999999999998876 88999999
Q ss_pred Cchhh--HHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccC
Q 014492 179 TFTMY--EFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEA 255 (423)
Q Consensus 179 ~y~~~--~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Dea 255 (423)
+|+.+ ...++..|++++.+|.++++.+|++++++.+++.++++|++++|+||||.+++.+++.++|+. |+++|+||+
T Consensus 83 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~D~a 162 (353)
T 2yrr_A 83 GAFSQRVAEMAALHGLDPEVLDFPPGEPVDPEAVARALKRRRYRMVALVHGETSTGVLNPAEAIGALAKEAGALFFLDAV 162 (353)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEECCTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECT
T ss_pred CCchHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHHhCCCCEEEEEccCCCcceecCHHHHHHHHHHcCCeEEEEcC
Confidence 99874 455677899999999877778999999999974389999999999999999999999999998 999999999
Q ss_pred CccccCCCchhhhhccCCcEEEEccChhhh-cccCccccccccCHHHHHHHH-----------------HhcCCCCCcHH
Q 014492 256 YTEFSGLESRMEWVKKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYLW-----------------RAKQPYNVSVA 317 (423)
Q Consensus 256 y~~~~~~~~~~~~~~~~~~~i~i~S~SK~~-g~~G~R~G~i~~~~~~~~~l~-----------------~~~~~~~~~~~ 317 (423)
|..... +.... ..+..+++.|++|.+ |.+| +||+++++++++.+. .....++.+..
T Consensus 163 ~~~~~~-~~~~~---~~~~d~~~~s~~K~~~~~~g--~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (353)
T 2yrr_A 163 TTLGML-PFSMR---AMGVDYAFTGSQKCLSAPPG--LAPIAASLEARKAFTGKRGWYLDLARVAEHWERGGYHHTTPVL 236 (353)
T ss_dssp TTTTTS-CCCHH---HHTCSEEECCTTSTTCCCSS--CEEEEECHHHHHHCCCCSCSTTCHHHHHHHHTTCCCSSCCCHH
T ss_pred cccccc-ccccc---ccCceEEEecCcccccCCCc--eEEEEECHHHHHHhccCCCccccHHHHhhhhhcCCCCCCCCHH
Confidence 963322 11111 223347888999954 4456 799999999887653 11223567777
Q ss_pred HHHHHHHHhCCh-HH-HHHHHHHHHHHHHHHHHHHccCCCCeecCC---CceEEEEEeCCCCCHHHHHHHHHhCCcEEEe
Q 014492 318 AEVAACAALQNP-IY-LEKVKEALIKERERLFKLLKDVPFLNPYPS---YSNFILCEVTSGMDAKKLKDDLAKMGVMIRH 392 (423)
Q Consensus 318 ~~~a~~~~l~~~-~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~---~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~ 392 (423)
.+.++.++++.. ++ +++.+++++++++++.+.|+++ ++.+.++ .+++++++++++.+..++.+.|.++||.+++
T Consensus 237 ~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~ 315 (353)
T 2yrr_A 237 LHYALLEALDLVLEEGVAARERRAREVYAWVLEELKAR-GFRPYPKASPLPTVLVVRPPEGVDADRLVRALYAEGVAVAG 315 (353)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCEESCSSSBCTTEEEEECCTTCCHHHHHHHHHHTTEECEE
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCccccCccCCCeEEEEECCCCCCHHHHHHHHHHCCEEEeC
Confidence 777777777542 22 6788899999999999999887 4554433 4566789987677899999999999999998
Q ss_pred CCCCCCCCeEEEEe---cChhhHH-HHHHHHhh
Q 014492 393 YNNKELKGYVRVSV---GKPEHTD-ALMECLMH 421 (423)
Q Consensus 393 ~~~~~~~~~iRis~---~~~~~~~-~l~~al~~ 421 (423)
+..+..++++||++ .+.++.+ ++.++|++
T Consensus 316 g~~~~~~~~iRi~~~~~~~~~~~~~~~~~~l~~ 348 (353)
T 2yrr_A 316 GIGPTRGQVLRLGLMGEGARREAYQAFLKALDR 348 (353)
T ss_dssp CCGGGTTTCEEEECSGGGSCHHHHHHHHHHHHH
T ss_pred CccccCCCeEEEecCccCCHHHHHHHHHHHHHH
Confidence 87655578999998 4566666 67676654
No 101
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=100.00 E-value=4.5e-34 Score=279.86 Aligned_cols=316 Identities=17% Similarity=0.147 Sum_probs=243.9
Q ss_pred eeEcCCCCCCCCCCHHHHHHHhcCCCCCCCC--CcchHHHHHHHHHHhCCCCC-cEEEeCCHHHHHHHHHHHhcCCCCeE
Q 014492 97 IVKIDANENPYGPPPEVREALGQLKFPYIYP--DPESRRLRAALAKDSGLESD-HILVGCGADELIDLIMRCVLDPGDKI 173 (423)
Q Consensus 97 ~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y~--~~g~~~lr~~ia~~~g~~~~-~i~~t~G~~~al~~~~~~l~~~gd~V 173 (423)
.+.+.. +++++++++.+++.+....+.++ .....++++++++++|++++ +|++|+|+++++..++.+++++||+|
T Consensus 20 ~~~~~~--g~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~v 97 (393)
T 2huf_A 20 KLLMGP--GPSNAPQRVLDAMSRPILGHLHPETLKIMDDIKEGVRYLFQTNNIATFCLSASGHGGMEATLCNLLEDGDVI 97 (393)
T ss_dssp CEECSS--SCCCCCHHHHHHTTSCCCCTTSHHHHHHHHHHHHHHHHHHTCCCSEEEEESSCHHHHHHHHHHHHCCTTCEE
T ss_pred eEEecC--CCCCCCHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEcCcHHHHHHHHHHHHhCCCCEE
Confidence 345544 46778899999998743322222 23578999999999999876 89999999999999999999999999
Q ss_pred EEcCCCchhhH--HHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEE
Q 014492 174 VDCPPTFTMYE--FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILV 250 (423)
Q Consensus 174 l~~~p~y~~~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~l 250 (423)
+++.|+|+.+. ..++..|++++.+|.+.++.+|++++++.+++.++++|++++|+||||.+++.+++.++|+. |+++
T Consensus 98 l~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~l 177 (393)
T 2huf_A 98 LIGHTGHWGDRSADMATRYGADVRVVKSKVGQSLSLDEIRDALLIHKPSVLFLTQGDSSTGVLQGLEGVGALCHQHNCLL 177 (393)
T ss_dssp EEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEE
T ss_pred EEECCCcchHHHHHHHHHcCCeeEEEeCCCCCCCCHHHHHHHHhccCCcEEEEEccCCCccccCCHHHHHHHHHHcCCEE
Confidence 99999998743 34566899999999877778999999999973379999999999999999999999999987 9999
Q ss_pred EEccCCccccCCCchhhhhccCCcEEEEccChhh-hcccCccccccccCHHHHHHHHHhc---CC---------------
Q 014492 251 VLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKR-AGLAGLRVGYGAFPLSIIEYLWRAK---QP--------------- 311 (423)
Q Consensus 251 i~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~-~g~~G~R~G~i~~~~~~~~~l~~~~---~~--------------- 311 (423)
|+||+|..... ... +...+.++++.|+||. +|++|+ ||+++++++++.+.+.. .+
T Consensus 178 i~D~a~~~~~~---~~~-~~~~~~d~~~~s~sK~l~g~~G~--G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (393)
T 2huf_A 178 IVDTVASLGGA---PMF-MDRWEIDAMYTGSQKVLGAPPGI--TPVSFSHRAVERYKRRNTKVKVYYWDMSLVGDYWGCF 251 (393)
T ss_dssp EEECTTTBTTB---CCC-TTTTTCSEEECCSSSTTCCCSSC--EEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCS
T ss_pred EEEcccccCCC---Ccc-hhhcCccEEEECCCcccccCCCe--EEEEECHHHHHHHhhcCCCCceEEEchHHHHhhhccc
Confidence 99999863221 111 2234567899999997 456776 99999999998887541 11
Q ss_pred -------CCCcHHHHHHHHHHhCCh-H-HHHHHHHHHHHHHHHHHHHHccCCCCeecCC----CceEEEEEeCCCCCHHH
Q 014492 312 -------YNVSVAAEVAACAALQNP-I-YLEKVKEALIKERERLFKLLKDVPFLNPYPS----YSNFILCEVTSGMDAKK 378 (423)
Q Consensus 312 -------~~~~~~~~~a~~~~l~~~-~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~----~~~~~~~~~~~~~~~~~ 378 (423)
.+.+..++.++.++++.. + .+++.+++++++++++.+.|++++ +.+.++ .+++++++++.+.+..+
T Consensus 252 ~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (393)
T 2huf_A 252 GRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRGLQDAG-FELYADPKDRLSTVTTIKVPQGVDWLK 330 (393)
T ss_dssp SSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCBSSCGGGBCTTEEEEECCTTCCHHH
T ss_pred cccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcC-CeeccCccccCCcEEEEEcCCCCCHHH
Confidence 245667777676677542 2 367888999999999999998874 444332 24588899876778899
Q ss_pred HHHHHHh-CCcEEEeCCCCCCCCeEEEEe-c---ChhhHHHHHHHHhh
Q 014492 379 LKDDLAK-MGVMIRHYNNKELKGYVRVSV-G---KPEHTDALMECLMH 421 (423)
Q Consensus 379 l~~~L~~-~gI~v~~~~~~~~~~~iRis~-~---~~~~~~~l~~al~~ 421 (423)
+.+.|.+ +||.++++..+..++++||++ + +.++++++.++|++
T Consensus 331 ~~~~L~~~~gi~v~~g~~~~~~~~~Ri~~~~~~~~~e~i~~~~~~l~~ 378 (393)
T 2huf_A 331 AAQYAMKTYLVEISGGLGPTAGQVFRIGLMGQNATTERVDRVLQVFQE 378 (393)
T ss_dssp HHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEecCcccccCCEEEEEcccCcCCHHHHHHHHHHHHH
Confidence 9999985 599999876554578999999 4 34456666666654
No 102
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=100.00 E-value=6.3e-34 Score=277.07 Aligned_cols=312 Identities=16% Similarity=0.108 Sum_probs=234.5
Q ss_pred eEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCc----------chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh
Q 014492 98 VKIDANENPYGPPPEVREALGQL-KFPYIYPDP----------ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV 166 (423)
Q Consensus 98 i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~----------g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l 166 (423)
++|+.+.+ .++++.+.+++.+. .....+|.. ...++++++++++|+++++|++|+|+++++.++++++
T Consensus 2 iyld~~~~-~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~~ 80 (382)
T 4hvk_A 2 AYFDYTSA-KPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGY 80 (382)
T ss_dssp CBCBTTTC-CCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEESSHHHHHHHHHHHH
T ss_pred EeecCCCc-CCCCHHHHHHHHHHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHcCCCcCeEEEECCchHHHHHHHHHh
Confidence 45665544 35678888888762 221222221 2348999999999998889999999999999999998
Q ss_pred c----CCCCeEEEcCCCchhhHHHHHH---CCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHH
Q 014492 167 L----DPGDKIVDCPPTFTMYEFDAAV---NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239 (423)
Q Consensus 167 ~----~~gd~Vl~~~p~y~~~~~~~~~---~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~ 239 (423)
+ ++||.|+++.++|+.+...++. .|++++.+|.++++.+|++++++.+. +++++|++++|+||||.+++.++
T Consensus 81 ~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~v~~~~~~nptG~~~~~~~ 159 (382)
T 4hvk_A 81 AMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLR-DDTILVSVQHANNEIGTIQPVEE 159 (382)
T ss_dssp HHHHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBCTTSCBCHHHHHHHCC-TTEEEEECCSBCTTTCBBCCHHH
T ss_pred hhhhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccCCCCCcCHHHHHHHhc-cCceEEEEECCCCCceeeCCHHH
Confidence 8 9999999999999987765544 69999999988888899999999997 68999999999999999999999
Q ss_pred HHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHh---------c
Q 014492 240 LLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA---------K 309 (423)
Q Consensus 240 l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~---------~ 309 (423)
+.++|+. |+ +|+|++|........ ....+.++++.|+||.+|.+| +|+++++++. .+... .
T Consensus 160 i~~l~~~~~~-li~D~a~~~~~~~~~----~~~~~~d~~~~s~~K~~g~~g--~g~~~~~~~~--~~~~~~~~~~~~~~~ 230 (382)
T 4hvk_A 160 ISEVLAGKAA-LHIDATASVGQIEVD----VEKIGADMLTISSNDIYGPKG--VGALWIRKEA--KLQPVILGGGQENGL 230 (382)
T ss_dssp HHHHHSSSSE-EEEECTTTBTTBCCC----HHHHTCSEEEEESGGGTSCTT--CEEEEEETTC--CCCCSSCSSCTGGGT
T ss_pred HHHHHHHcCE-EEEEhHHhcCCCCCC----chhcCCCEEEEeHHHhcCCCc--eEEEEEcCcc--CcCcccccCCCcCcc
Confidence 9999998 99 999999874321111 112234589999999877666 6777765543 11111 1
Q ss_pred CCCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCC----ceEEEEEeCCCCCHHHHHHHHH
Q 014492 310 QPYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSY----SNFILCEVTSGMDAKKLKDDLA 384 (423)
Q Consensus 310 ~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~----~~~~~~~~~~~~~~~~l~~~L~ 384 (423)
..++.+...+.++.++++. .+++++.+++++++++++.+.|++++++.+.+.. ++++++.++ +.+..++.+.|.
T Consensus 231 ~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~ 309 (382)
T 4hvk_A 231 RSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFS-YIEGESIVLSLD 309 (382)
T ss_dssp SCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEET-TCCHHHHHHHHH
T ss_pred ccCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCCEEEEEEC-CCCHHHHHHHHH
Confidence 1344567777777666653 3577889999999999999999988766654332 357778886 678899999999
Q ss_pred hCCcEEEeCCCCCC-------------------CCeEEEEec---ChhhHHHHHHHHhh
Q 014492 385 KMGVMIRHYNNKEL-------------------KGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 385 ~~gI~v~~~~~~~~-------------------~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
++||.++++..+.. ++++||+++ +.++++++.++|++
T Consensus 310 ~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~ 368 (382)
T 4hvk_A 310 MAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPG 368 (382)
T ss_dssp HTTCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred HCCEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHH
Confidence 99999998754211 589999998 56666777766654
No 103
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=100.00 E-value=1e-33 Score=280.14 Aligned_cols=318 Identities=15% Similarity=0.103 Sum_probs=245.2
Q ss_pred CCCCeeEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCCc-----------chHHHHHHHHHHhCCCCCcEEEeCCHHHH
Q 014492 93 KPEDIVKIDANENPYGPPPEVREALGQL-K--FPYIYPDP-----------ESRRLRAALAKDSGLESDHILVGCGADEL 158 (423)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~Y~~~-----------g~~~lr~~ia~~~g~~~~~i~~t~G~~~a 158 (423)
++.+.++|+.+.+. ++++++.+++.+. . ....+|.. ...++++++++++|+++++|++|+|++++
T Consensus 19 ~~~~~iyld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggt~a 97 (423)
T 3lvm_A 19 AMKLPIYLDYSATT-PVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPREIVFTSGATES 97 (423)
T ss_dssp -CCSSEECBTTTCC-CCCHHHHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESSHHHH
T ss_pred ccCCCEeecCCCcC-CCCHHHHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHcCCCCCeEEEeCChHHH
Confidence 45678999987775 6789999999873 3 12222221 23689999999999988999999999999
Q ss_pred HHHHHHHhcC----CCCeEEEcCCCchhhHHHH---HHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCc
Q 014492 159 IDLIMRCVLD----PGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPD 231 (423)
Q Consensus 159 l~~~~~~l~~----~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPt 231 (423)
+.++++++++ +||.|+++.|+|+.+...+ +..|++++.+|.+.++.+|++++++.+. +++++|++++|+|||
T Consensus 98 ~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~v~~~~~~npt 176 (423)
T 3lvm_A 98 DNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMR-DDTILVSIMHVNNEI 176 (423)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHCC-TTEEEEECCSBCTTT
T ss_pred HHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCCCCccCHHHHHHhcC-CCcEEEEEeCCCCCC
Confidence 9999998874 7999999999999887766 4459999999988888899999999997 689999999999999
Q ss_pred CcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhc-
Q 014492 232 GSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK- 309 (423)
Q Consensus 232 G~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~- 309 (423)
|.+++.++|.++|+. |++||+||+|...... ......+.++++.|+||.+|.+| +||++++++.++.+....
T Consensus 177 G~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~----~~~~~~~~di~~~s~sK~~g~~g--~G~~~~~~~~~~~~~~~~~ 250 (423)
T 3lvm_A 177 GVVQDIAAIGEMCRARGIIYHVDATQSVGKLP----IDLSQLKVDLMSFSGHKIYGPKG--IGALYVRRKPRVRIEAQMH 250 (423)
T ss_dssp CBBCCHHHHHHHHHHHTCEEEEECTTTTTTSC----CCTTTSCCSEEEEESTTTTSCSS--CEEEEECBTTBCCCCCSSC
T ss_pred ccccCHHHHHHHHHHcCCEEEEEhhhhcCCCC----cChhhcCCCEEEechHHhcCCCC--eEEEEEeccccCCCCcccc
Confidence 999999999999988 9999999998753321 11123345689999999887666 899999877665554332
Q ss_pred --------CCCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCC----ceEEEEEeCCCCCH
Q 014492 310 --------QPYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSY----SNFILCEVTSGMDA 376 (423)
Q Consensus 310 --------~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~----~~~~~~~~~~~~~~ 376 (423)
..++.+...+.++..+++. .+++++.+++++++++++.+.|++++++.+.+.. ++++++.++ +.+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 329 (423)
T 3lvm_A 251 GGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSFN-YVEG 329 (423)
T ss_dssp SSCTTTTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEESCSTTBCTTEEEEEET-TSCH
T ss_pred CCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEeC-CCCH
Confidence 2345677777777666654 3457888999999999999999998766654333 356777775 6788
Q ss_pred HHHHHHHHhCCcEEEeCCCCCC-------------------CCeEEEEec---ChhhHHHHHHHHhh
Q 014492 377 KKLKDDLAKMGVMIRHYNNKEL-------------------KGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 377 ~~l~~~L~~~gI~v~~~~~~~~-------------------~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
.++.+.|.+ |.++++..+.. .+++||+++ +.++++++.++|++
T Consensus 330 ~~l~~~l~~--i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~ 394 (423)
T 3lvm_A 330 ESLIMALKD--LAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRK 394 (423)
T ss_dssp HHHHHHTTT--EECBCCCC-----CCCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhh--heeccCccccCCCccccHHHHHhCCCccccCceEEEECCCCCCHHHHHHHHHHHHH
Confidence 889888876 88877653111 489999998 55666777666654
No 104
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=100.00 E-value=2.7e-33 Score=276.30 Aligned_cols=311 Identities=13% Similarity=0.043 Sum_probs=244.9
Q ss_pred CCCCCCCHHHHHHHhcCCCCCCCCC---cchHHHHHHHHHHhCCCCCcEE-EeCCHHHHHHHHHHHhcCCCCeEEEcCCC
Q 014492 104 ENPYGPPPEVREALGQLKFPYIYPD---PESRRLRAALAKDSGLESDHIL-VGCGADELIDLIMRCVLDPGDKIVDCPPT 179 (423)
Q Consensus 104 ~~~~~~~~~v~~al~~~~~~~~Y~~---~g~~~lr~~ia~~~g~~~~~i~-~t~G~~~al~~~~~~l~~~gd~Vl~~~p~ 179 (423)
..+.+.++.+.+++.+... ..|+. ....++++++++++|.++++++ +++|+++++..++.+++++||+|+++.|+
T Consensus 17 p~p~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~l~~~la~~~g~~~~~~~~~~~s~t~al~~~~~~l~~~gd~Vl~~~~~ 95 (416)
T 3isl_A 17 PGPVEVDPRVLRVMSTPVV-GQFDPAFTGIMNETMEMLRELFQTKNRWAYPIDGTSRAGIEAVLASVIEPEDDVLIPIYG 95 (416)
T ss_dssp SSSCCCCHHHHHHTTSCCC-CTTSHHHHHHHHHHHHHHHHHTTCCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEESS
T ss_pred CCCcCcCHHHHHHhcccCC-CCccHHHHHHHHHHHHHHHHHhCCCCCcEEEecCcHHHHHHHHHHHhcCCCCEEEEecCC
Confidence 3566678899998877432 22322 2367899999999999877665 88999999999999999999999999999
Q ss_pred chh--hHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCC
Q 014492 180 FTM--YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAY 256 (423)
Q Consensus 180 y~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay 256 (423)
|.. +...++..|++++.+|.+.++.+|++++++++++.++++|++++|+||||.+++.+++.++|+. |+++|+|++|
T Consensus 96 ~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~ 175 (416)
T 3isl_A 96 RFGYLLTEIAERYGANVHMLECEWGTVFDPEDIIREIKKVKPKIVAMVHGETSTGRIHPLKAIGEACRTEDALFIVDAVA 175 (416)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCHHHHHHHHHTTCEEEEECTT
T ss_pred cccHHHHHHHHhcCCeeEEEecCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCceecCHHHHHHHHHHcCCEEEEECCc
Confidence 987 7777888999999999887888999999999975589999999999999999999999999987 9999999998
Q ss_pred ccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhc---------------------------
Q 014492 257 TEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK--------------------------- 309 (423)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~--------------------------- 309 (423)
....... .....+.++++.|++|.++ ++.++|++++++++++.+...+
T Consensus 176 ~~~~~~~----~~~~~~~d~~~~s~~K~l~-g~~g~g~~~~~~~~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~ 250 (416)
T 3isl_A 176 TIGGCEV----KVDEWKIDAAIGGTQKCLS-VPSGMAPITYNERVADVIAARKKVERGIATQADRAALSGNRPITSNYFD 250 (416)
T ss_dssp TTTTSCC----CTTTTTCSEEECCSSSTTC-CCSSEEEEEECHHHHHHHHTC------------------CCCCSCSTTC
T ss_pred cccCCCc----chhhcCCCEEEecCccccC-CCCCeEEEEECHHHHHHhhccccccccccccccchhccCCCCCCccccc
Confidence 7433211 1122345689999999743 3445899999999988876421
Q ss_pred -------------CCCCCcHHHHHHHHHHhCC-hHH-HHHHHHHHHHHHHHHHHHHccCCCCeecCC-C---ceEEEEEe
Q 014492 310 -------------QPYNVSVAAEVAACAALQN-PIY-LEKVKEALIKERERLFKLLKDVPFLNPYPS-Y---SNFILCEV 370 (423)
Q Consensus 310 -------------~~~~~~~~~~~a~~~~l~~-~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~-~---~~~~~~~~ 370 (423)
..++.+...+.++.++++. .++ +++.+++++++++++.+.|++++ +.+.+. . ++++++.+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~ 329 (416)
T 3isl_A 251 LSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLETRFERHRHHEAALAAGIKAMG-LRLFGDDSCKMPVVTCVEI 329 (416)
T ss_dssp HHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCBCSCGGGBCTTEEEEEC
T ss_pred hHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcC-CEeccCccccCCcEEEEeC
Confidence 1235677777777777765 334 78899999999999999999874 443332 2 57888999
Q ss_pred CCCCCHHHHHHHHHhC-CcEEEeCCCCCCCCeEEEEe---cChhh-HHHHHHHHhh
Q 014492 371 TSGMDAKKLKDDLAKM-GVMIRHYNNKELKGYVRVSV---GKPEH-TDALMECLMH 421 (423)
Q Consensus 371 ~~~~~~~~l~~~L~~~-gI~v~~~~~~~~~~~iRis~---~~~~~-~~~l~~al~~ 421 (423)
+++.+..++.+.|.++ ||.++++..+..++++||++ .+.++ ++++.++|++
T Consensus 330 ~~~~~~~~l~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~ 385 (416)
T 3isl_A 330 PGGIDGESVRDMLLAQFGIEIASSFGPLAGKIWRIGTMGYSCRKENVLFVLAGLEA 385 (416)
T ss_dssp CTTCCHHHHHHHHHHHHCEECBCCCSTTTTTEEEEECCGGGCSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhCCEEEecCCCCCCCCEEEEecccCCCcHHHHHHHHHHHHH
Confidence 8778899999999865 99999877555678999999 45554 6666666654
No 105
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=100.00 E-value=1e-33 Score=276.96 Aligned_cols=313 Identities=14% Similarity=0.131 Sum_probs=244.5
Q ss_pred CCCCCCCCHHHHHHHhcCCCCCCCCC--cchHHHHHHHHHHhCCCCC-cEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCC
Q 014492 103 NENPYGPPPEVREALGQLKFPYIYPD--PESRRLRAALAKDSGLESD-HILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179 (423)
Q Consensus 103 ~~~~~~~~~~v~~al~~~~~~~~Y~~--~g~~~lr~~ia~~~g~~~~-~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~ 179 (423)
+..+.++++++.+++.+....+.++. ....+++++++++++.+.+ +|++|+|+++++..++++++++||+|+++.++
T Consensus 28 ~p~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~~al~~~~~~~~~~gd~vl~~~~~ 107 (393)
T 3kgw_A 28 GPGPSNLAPRVLAAGSLRMIGHMQKEMLQIMEEIKQGIQYVFQTRNPLTLVVSGSGHCAMETALFNLLEPGDSFLTGTNG 107 (393)
T ss_dssp SSSCCCCCHHHHHHTTCCCCCTTSHHHHHHHHHHHHHHHHHHTCCCSEEEEESCCTTTHHHHHHHHHCCTTCEEEEEESS
T ss_pred cCCCCCCCHHHHHHhcccccCcccHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCcHHHHHHHHHhcCCCCCEEEEEeCC
Confidence 34677788999999987433233333 2356899999999998655 59999999999999999999999999999888
Q ss_pred ch--hhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCC
Q 014492 180 FT--MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAY 256 (423)
Q Consensus 180 y~--~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay 256 (423)
|. .+...++..|++++.+|.+.++.+|++++++.+++.++++|++++|+||||.+++.+++.++|+. |+++|+||+|
T Consensus 108 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~ 187 (393)
T 3kgw_A 108 IWGMRAAEIADRIGARVHQMIKKPGEHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQPLDGFGELCHRYQCLLLVDSVA 187 (393)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTT
T ss_pred chhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCcEEEEeccCCcchhhccHHHHHHHHHHcCCEEEEECCc
Confidence 85 34667788999999999877778999999999984489999999999999999999999999987 9999999999
Q ss_pred ccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC-------------------------C
Q 014492 257 TEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ-------------------------P 311 (423)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~-------------------------~ 311 (423)
....... .....+..+++.|+||.++ ++.++||+++++++++.+..... .
T Consensus 188 ~~g~~~~----~~~~~~~d~~~~s~sK~~~-~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (393)
T 3kgw_A 188 SLGGVPI----YMDQQGIDIMYSSSQKVLN-APPGISLISFNDKAKYKVYSRKTKPVSFYTDITYLAKLWGCEGETRVIH 262 (393)
T ss_dssp TTTTSCC----CTTTTTCCEEEEESSSTTC-CCSSCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCCCC
T ss_pred cccCccc----chhhcCCCEEEecCccccc-CCCceeEEEECHHHHHHHhccCCCCCceeecHHHHHHhhhhccccCCCC
Confidence 7432111 1123345688899999764 33448999999999988865332 2
Q ss_pred CCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeec-CC----CceEEEEEeCCCCCHHHHHHHHH
Q 014492 312 YNVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPY-PS----YSNFILCEVTSGMDAKKLKDDLA 384 (423)
Q Consensus 312 ~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~----~~~~~~~~~~~~~~~~~l~~~L~ 384 (423)
++.+..++.++.++++. .+++++.+++++++++++.+.|++++ +.+. +. .+.++++.++++.+..++.+.|.
T Consensus 263 ~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 341 (393)
T 3kgw_A 263 HTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHLQEMG-LKFFVKDPEIRLPTITTVTVPAGYNWRDIVSYVL 341 (393)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCBSSSSGGGBCSSEEEEECCTTBCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcC-CeeccCChhhcCCeEEEEeCCCCCCHHHHHHHHH
Confidence 35677777777777764 23478889999999999999999884 4433 22 24677889887788999999998
Q ss_pred hC-CcEEEeCCCCCCCCeEEEEe-c---ChhhHHHHHHHHhh
Q 014492 385 KM-GVMIRHYNNKELKGYVRVSV-G---KPEHTDALMECLMH 421 (423)
Q Consensus 385 ~~-gI~v~~~~~~~~~~~iRis~-~---~~~~~~~l~~al~~ 421 (423)
++ ||.++++..+..++++||++ + +.++++++.++|++
T Consensus 342 ~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~ 383 (393)
T 3kgw_A 342 DHFSIEISGGLGPTEERVLRIGLLGYNATTENVDRVAEALRE 383 (393)
T ss_dssp HHHCEECBCCCGGGTTTEEEEECCGGGCCHHHHHHHHHHHHH
T ss_pred HhCCEEEeCCcccCCCCEEEEEecccCCCHHHHHHHHHHHHH
Confidence 76 99999887655678999998 4 45566666666554
No 106
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=100.00 E-value=5.5e-34 Score=277.93 Aligned_cols=314 Identities=16% Similarity=0.118 Sum_probs=237.8
Q ss_pred eEcCCCCCCCCCCHHHHHHHhcC-CC----CC-CCCC-----cchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh
Q 014492 98 VKIDANENPYGPPPEVREALGQL-KF----PY-IYPD-----PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV 166 (423)
Q Consensus 98 i~l~~~~~~~~~~~~v~~al~~~-~~----~~-~Y~~-----~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l 166 (423)
+.|+.+.+. ++++.+++++.+. .. .+ .|+. ....++|+++++++|+++++|++|+|+++++.+++.++
T Consensus 2 ~yld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~l 80 (382)
T 4eb5_A 2 AYFDYTSAK-PVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGY 80 (382)
T ss_dssp CBCBTTTCC-CCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCTTEEEEEESSHHHHHHHHHHHH
T ss_pred eeeccCCCC-CCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcCchHHHHHHHHHHH
Confidence 456665554 5788998888762 21 11 2421 24578999999999998889999999999999999998
Q ss_pred c----CCCCeEEEcCCCchhhHHHHHH---CCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHH
Q 014492 167 L----DPGDKIVDCPPTFTMYEFDAAV---NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239 (423)
Q Consensus 167 ~----~~gd~Vl~~~p~y~~~~~~~~~---~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~ 239 (423)
. ++||+|++++|+|+.+...++. .|++++.+|.++++.+|++++++.++ .++++|++++|+||||.+++.++
T Consensus 81 ~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~v~~~~~~nptG~~~~l~~ 159 (382)
T 4eb5_A 81 AMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLR-DDTILVSVQHANNEIGTIQPVEE 159 (382)
T ss_dssp HHHHGGGCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCTTSCBCHHHHHHHCC-TTEEEEECCSBCTTTCBBCCHHH
T ss_pred HhhccCCCCEEEECCCcchHHHHHHHHHHhCCcEEEEeccCCCCccCHHHHHHHhc-CCCeEEEEeccCCCccccCCHHH
Confidence 8 8999999999999987766653 69999999987777899999999997 58999999999999999999999
Q ss_pred HHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHH-HHHHH------HhcCC
Q 014492 240 LLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI-IEYLW------RAKQP 311 (423)
Q Consensus 240 l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~-~~~l~------~~~~~ 311 (423)
+.++|+. |++ |+||+|..... +.. +...+.++++.|+||.+|.+| +||++++++. +.... .....
T Consensus 160 i~~l~~~~~~~-i~D~a~~~g~~-~~~---~~~~~~di~~~s~sK~~g~~g--~G~~~~~~~~~l~~~~~~~~~~~~~~~ 232 (382)
T 4eb5_A 160 ISEVLAGKAAL-HIDATASVGQI-EVD---VEKIGADMLTISSNDIYGPKG--VGALWIRKEAKLQPVILGGGQENGLRS 232 (382)
T ss_dssp HHHHHTTSSEE-EEECTTTBTTB-CCC---HHHHTCSEEEEETGGGTCCSS--CEEEEEETTCCCCCSSCSSCTGGGTSC
T ss_pred HHHHHHHCCCE-EEEcchhcCCc-ccC---ccccCCCEEEeehHHhcCCCc--eEEEEEccccccCceecCCCccccccC
Confidence 9999998 999 99999983211 111 112245689999999887666 6898887663 21110 11123
Q ss_pred CCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCC----ceEEEEEeCCCCCHHHHHHHHHhC
Q 014492 312 YNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSY----SNFILCEVTSGMDAKKLKDDLAKM 386 (423)
Q Consensus 312 ~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~----~~~~~~~~~~~~~~~~l~~~L~~~ 386 (423)
++.+...+.++..+++. .+++++.+++++++++++.+.|++++++.+.++. ++++++.++ +.+..++.+.|.++
T Consensus 233 ~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~ 311 (382)
T 4eb5_A 233 GSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFS-YIEGESIVLSLDMA 311 (382)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEET-TSCHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCcccCCCCEEEEEeC-CcCHHHHHHHHHHC
Confidence 45666666666666654 3457888999999999999999988655554332 568888887 67889999999999
Q ss_pred CcEEEeCCCC--------------C-----CCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 387 GVMIRHYNNK--------------E-----LKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 387 gI~v~~~~~~--------------~-----~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
||.++++..+ + .++++||+++ +.++++++.++|++
T Consensus 312 gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 368 (382)
T 4eb5_A 312 GIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPG 368 (382)
T ss_dssp TCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred CEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECCCCCCHHHHHHHHHHHHH
Confidence 9999987531 1 2579999998 55666666666554
No 107
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=100.00 E-value=3.5e-34 Score=281.74 Aligned_cols=318 Identities=19% Similarity=0.124 Sum_probs=240.9
Q ss_pred CCCeeEcCCCCC-CCCCCHHHHHHHhcC----CC-----CCCCCCc-chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492 94 PEDIVKIDANEN-PYGPPPEVREALGQL----KF-----PYIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (423)
Q Consensus 94 ~~~~i~l~~~~~-~~~~~~~v~~al~~~----~~-----~~~Y~~~-g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~ 162 (423)
+++++++..+++ .++++|++.+++.+. .. ...|+.. +..++|+++++++|. +++|++++|++ ++..+
T Consensus 45 g~~~i~~~~~~~~~~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~-~~~i~~~sG~~-a~~~~ 122 (401)
T 2bwn_A 45 KQDITVWCGNDYLGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQK-EAALVFSSAYN-ANDAT 122 (401)
T ss_dssp EEEEEECSCSCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTTC-SEEEEESCHHH-HHHHH
T ss_pred CCcEEEeeCCCcccCCCCHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHhCC-CcEEEECCcHH-HHHHH
Confidence 355788887766 566788888888652 11 1234443 678999999999996 57899988887 66666
Q ss_pred HHHhc--CCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc---CCceEEEEcCCCCCcCcCCCH
Q 014492 163 MRCVL--DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIIND 237 (423)
Q Consensus 163 ~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~ 237 (423)
+..++ .+||.|+++.|+|+.+...++..|++++.+|.+ |++++++.+.. +++++|++++|+||||.+++.
T Consensus 123 ~~~l~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~le~~l~~~~~~~~~~v~~~~~~nptG~~~~l 197 (401)
T 2bwn_A 123 LSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRHN-----DVAHLRELIAADDPAAPKLIAFESVYSMDGDFGPI 197 (401)
T ss_dssp HHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEECTT-----CHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCCH
T ss_pred HHHHhcCCCCCEEEECchhhHHHHHHHHHcCCeEEEEcCC-----CHHHHHHHHHhhccCCceEEEEecCcCCCCCcCCH
Confidence 66553 589999999999999999899999999999963 78888888753 478999999999999999999
Q ss_pred HHHHHHHcC-CCEEEEccCCccccCCCc---hhhhhcc-CCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC-
Q 014492 238 EDLLKILEM-PILVVLDEAYTEFSGLES---RMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP- 311 (423)
Q Consensus 238 ~~l~~i~~~-~~~li~Deay~~~~~~~~---~~~~~~~-~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~- 311 (423)
+++.++|+. |+++|+||+|..+.+++. .....+. .+.+++++|+||.+|++| ||+++++++++.+......
T Consensus 198 ~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G---G~~~~~~~~~~~l~~~~~~~ 274 (401)
T 2bwn_A 198 KEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG---GYIAASARMVDAVRSYAPGF 274 (401)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC---EEEEECHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccCCC---CEEecCHHHHHHHHHhCcCc
Confidence 999999998 999999999995443221 1111111 123688999999999888 9999999998887654321
Q ss_pred ---CCCcHHHHHHHHHHhCCh--HHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHH-h
Q 014492 312 ---YNVSVAAEVAACAALQNP--IYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-K 385 (423)
Q Consensus 312 ---~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~-~ 385 (423)
.+.+++.+.++.++++.. ..+++.+++++++++++.+.|++++ +.+.++.++++|+.++++.+..++.+.|. +
T Consensus 275 ~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 353 (401)
T 2bwn_A 275 IFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKALG-MPIIDHGSHIVPVVIGDPVHTKAVSDMLLSD 353 (401)
T ss_dssp HTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHT-CCBCCCSSSCEEEECCCHHHHHHHHHHHHHH
T ss_pred eecCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHCC-CcccCCCCCeEEEEeCChHHHHHHHHHHHhc
Confidence 234557777777777542 2247888899999999999998874 45445556799999975456788999996 8
Q ss_pred CCcEEEeCCCCC---CCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492 386 MGVMIRHYNNKE---LKGYVRVSVG---KPEHTDALMECLMHL 422 (423)
Q Consensus 386 ~gI~v~~~~~~~---~~~~iRis~~---~~~~~~~l~~al~~l 422 (423)
+||.++++..+. +.+++||+++ +.++++++.++|+++
T Consensus 354 ~gi~v~~~~~~~~~~~~~~iRis~~~~~t~~~i~~~~~~l~~~ 396 (401)
T 2bwn_A 354 YGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLL 396 (401)
T ss_dssp HCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHH
T ss_pred CCEEEeecCCCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHH
Confidence 899998876533 2369999998 566667777666653
No 108
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=100.00 E-value=1e-33 Score=280.89 Aligned_cols=318 Identities=15% Similarity=0.089 Sum_probs=243.5
Q ss_pred CCCCeeEcCCCCC-CCCCCHHHHHHHhcC-C-CCCC---C----C-CcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492 93 KPEDIVKIDANEN-PYGPPPEVREALGQL-K-FPYI---Y----P-DPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (423)
Q Consensus 93 ~~~~~i~l~~~~~-~~~~~~~v~~al~~~-~-~~~~---Y----~-~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~ 161 (423)
++.++|||+.|.+ .+.++|++.+++.+. . ++.. | + .....++++.+++++|.+ +.+ +++++++++..
T Consensus 62 ~g~~~id~~~~~~lg~~~~~~v~~a~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~la~~~g~~-~~i-~~~sGs~a~~~ 139 (427)
T 2w8t_A 62 RGKDTILLGTYNYMGMTFDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRDFYGTT-GAI-VFSTGYMANLG 139 (427)
T ss_dssp TTEEEEECSCCCTTCGGGCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHHHHHTCS-EEE-EESCHHHHHHH
T ss_pred CCceEEEEECcccccCCCCHHHHHHHHHHHHHhCCCCcccccccCCcHHHHHHHHHHHHHhCCC-ceE-EecCcHHHHHH
Confidence 4567899999864 445788888887652 1 1111 2 1 233578999999999974 444 45555568888
Q ss_pred HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcC---CceEEEEcCCCCCcCcCCCHH
Q 014492 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE---KPKCIFLTSPNNPDGSIINDE 238 (423)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~---~~~~i~l~~p~NPtG~~~~~~ 238 (423)
++.+++++||.|+++.|+|..+...++..|++++.+| ..|++++++.+.+. ++++|++++++||||.+++.+
T Consensus 140 al~~l~~~gd~vl~~~~~h~~~~~~~~~~g~~~~~~~-----~~d~~~le~~l~~~~~~~~~~v~~~~~~n~tG~~~~l~ 214 (427)
T 2w8t_A 140 IISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRFR-----HNSVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIAPLK 214 (427)
T ss_dssp HHHHHSCTTCEEEEETTCCHHHHHHHHHSCSEEEEEC-----TTCHHHHHHHHHTSCSSSCEEEEEESEETTTTEECCHH
T ss_pred HHHHhcCCCCEEEECCcccHHHHHHHHHcCCeeEEeC-----CCCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHH
Confidence 8998999999999999999999999999999999988 36899999998742 789999999999999999999
Q ss_pred HHHHHHcC-CCEEEEccCCccccCCC---chhhhhc-cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhc----
Q 014492 239 DLLKILEM-PILVVLDEAYTEFSGLE---SRMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK---- 309 (423)
Q Consensus 239 ~l~~i~~~-~~~li~Deay~~~~~~~---~~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~---- 309 (423)
+|.++|+. |+++|+||+|..+..+. ......+ ..+.+++++||||.+|++| ||+++++++++.+....
T Consensus 215 ~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g~~g---G~v~~~~~l~~~l~~~~~~~~ 291 (427)
T 2w8t_A 215 EMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVGTVG---GFVVSNHPKFEAVRLACRPYI 291 (427)
T ss_dssp HHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSCC---EEEEECCTTGGGGGGTCHHHH
T ss_pred HHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhccCC---CEEEeCHHHHHHHHHhccccc
Confidence 99999987 99999999999876542 1222122 2345799999999998777 99999988887765432
Q ss_pred CCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeec-CC-CceEEEEEeCCCCCHHHHHHHHHhCC
Q 014492 310 QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPY-PS-YSNFILCEVTSGMDAKKLKDDLAKMG 387 (423)
Q Consensus 310 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~-~~~~~~~~~~~~~~~~~l~~~L~~~g 387 (423)
..++.++..+.++.++|+..+..++.+++++++++++.+.|++++ +.+. ++ .++++|+.++++.+..++.+.|.++|
T Consensus 292 ~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G 370 (427)
T 2w8t_A 292 FTASLPPSVVATATTSIRKLMTAHEKRERLWSNARALHGGLKAMG-FRLGTETCDSAIVAVMLEDQEQAAMMWQALLDGG 370 (427)
T ss_dssp SSCCCCHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHT-CEESCSSCCSSEEEEEESSHHHHHHHHHHHHHTT
T ss_pred ccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC-CcccCCCCCCCEEEEEECCHHHHHHHHHHHHHCC
Confidence 234677777777777776533357788899999999999998874 4444 55 77899999975456788999999899
Q ss_pred cEEEeCCCCC---CCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 388 VMIRHYNNKE---LKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 388 I~v~~~~~~~---~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
|.+.++..+. ..+++||+++ +.++++++.++|++
T Consensus 371 i~v~~~~~~~~~~~~~~lRi~~~~~~t~e~i~~~~~~l~~ 410 (427)
T 2w8t_A 371 LYVNMARPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQA 410 (427)
T ss_dssp EECEEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred eEEeeeCCCCCCCCCeEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 9999876532 3469999998 45555555555543
No 109
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=100.00 E-value=8.2e-34 Score=276.36 Aligned_cols=308 Identities=14% Similarity=0.158 Sum_probs=233.9
Q ss_pred CCCCeeEcCCCC--CCCC-CCHHHHHHHhcC-C----CCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHH
Q 014492 93 KPEDIVKIDANE--NPYG-PPPEVREALGQL-K----FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (423)
Q Consensus 93 ~~~~~i~l~~~~--~~~~-~~~~v~~al~~~-~----~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~ 164 (423)
.+..++||+.+. ++++ +++.+.+++.+. . ....|++.+..++++++++++|+ +++|++|+|+++++..++.
T Consensus 26 ~g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~l~~~la~~~g~-~~~v~~~~g~t~a~~~~~~ 104 (375)
T 2eh6_A 26 EGKEYLDFVSGIGVNSLGHAYPKLTEALKEQVEKLLHVSNLYENPWQEELAHKLVKHFWT-EGKVFFANSGTESVEAAIK 104 (375)
T ss_dssp TCCEEEESSHHHHTCTTCBSCHHHHHHHHHHHHHCSCCCTTBCCHHHHHHHHHHHHTSSS-CEEEEEESSHHHHHHHHHH
T ss_pred CCCEEEEcCCcccccccCCCCHHHHHHHHHHHHhccccCcccCCHHHHHHHHHHHhhcCC-CCeEEEeCchHHHHHHHHH
Confidence 456789998875 5777 789998888762 1 12467777788999999999998 4899999999999999987
Q ss_pred H---hc---CCC-CeEEEcCCCchhhHHHHHHCCCe-------------EEEecCCCCCCCCHHHHHHHhhcCCceEEEE
Q 014492 165 C---VL---DPG-DKIVDCPPTFTMYEFDAAVNGAA-------------VVKVPRKSDFSLNVELIADAVEREKPKCIFL 224 (423)
Q Consensus 165 ~---l~---~~g-d~Vl~~~p~y~~~~~~~~~~g~~-------------~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l 224 (423)
. ++ ++| |+|++++|+|+.+...+...+.. +..+|. .|++++++.++ +++++|++
T Consensus 105 ~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~-~~~~~v~~ 178 (375)
T 2eh6_A 105 LARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKL-----NDIDSVYKLLD-EETAGIII 178 (375)
T ss_dssp HHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECT-----TCHHHHHTTCC-TTEEEEEE
T ss_pred HHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCC-----chHHHHHHHhc-CCeEEEEE
Confidence 4 35 788 99999999998776655443322 333331 58999999997 68999999
Q ss_pred cCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEEEccChhhhcccCcccccccc
Q 014492 225 TSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF 297 (423)
Q Consensus 225 ~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~ 297 (423)
++|+||||.+.+ .+++.++|+. |+++|+||+|.+|...+.. ....+...+++ ||||.++ +|+|+||+++
T Consensus 179 ~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~d~~---s~SK~~~-~g~~~G~~~~ 254 (375)
T 2eh6_A 179 EVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFNLKPDVI---ALAKGLG-GGVPIGAILA 254 (375)
T ss_dssp CSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE---EECGGGG-TTSCCEEEEE
T ss_pred eCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcchhhhhcCCCCCEE---EEccccc-CCCCeEEEEE
Confidence 999999999976 5666666665 9999999999977543321 22222223433 7889998 7999999999
Q ss_pred CHHHHHHHHH--hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCC
Q 014492 298 PLSIIEYLWR--AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMD 375 (423)
Q Consensus 298 ~~~~~~~l~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~ 375 (423)
++++++.+.. ....++.+++.+.++.++|+..+ +..++++++++++.+.|++++. ...++.++|+|+++++ +
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~l~~~L~~~~~-~~~~~~g~~~~~~~~~--~ 328 (375)
T 2eh6_A 255 REEVAQSFTPGSHGSTFGGNPLACRAGTVVVDEVE---KLLPHVREVGNYFKEKLKELGK-GKVKGRGLMLGLELER--E 328 (375)
T ss_dssp EHHHHTTCCTTSCCCSSTTCHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHTTS-SEEEEETTEEEEECSS--C
T ss_pred cHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhc-CCceEEEEEEEEEEcC--c
Confidence 9988877655 23346778888888888875433 6778888999999999988765 3345678999999963 5
Q ss_pred HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 376 AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 376 ~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
..++++.|.++||.+.++. ++++||+++ +.++++++.++|++
T Consensus 329 ~~~~~~~l~~~gi~~~~~~----~~~iRi~~~~~~~~~~i~~~~~~l~~ 373 (375)
T 2eh6_A 329 CKDYVLKALEKGLLINCTA----GKVLRFLPPLIIQKEHIDRAISVLRE 373 (375)
T ss_dssp CHHHHHHHHHTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 6789999999999999864 689999965 45555555555554
No 110
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=100.00 E-value=3.8e-33 Score=274.76 Aligned_cols=305 Identities=16% Similarity=0.117 Sum_probs=228.0
Q ss_pred eEcCCCCCCCCCCHHHH----HHHh---cCCCCCCCCCcch---HHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhc
Q 014492 98 VKIDANENPYGPPPEVR----EALG---QLKFPYIYPDPES---RRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL 167 (423)
Q Consensus 98 i~l~~~~~~~~~~~~v~----~al~---~~~~~~~Y~~~g~---~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~ 167 (423)
..++.+++++.+++.+. +++. .-...++|+..+. .++++++++++|.+ ++++++|+++++..++.+++
T Consensus 21 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~~~~~~~l~~~ia~~~g~~--~~i~~~~g~~ai~~~~~~l~ 98 (404)
T 1e5e_A 21 QFGAAIPPIYQTSTFVFDNCQQGGNRFAGQESGYIYTRLGNPTVSNLEGKIAFLEKTE--ACVATSSGMGAIAATVLTIL 98 (404)
T ss_dssp TTCCSSCCCCCCSBCCCSSHHHHHHHHTTSSCSCCBTTTCCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHHC
T ss_pred CCCCcCCCCcCCCccccCCHHHHHHhhcCCcCCccccCCcChHHHHHHHHHHHHhCCC--cEEEeCChHHHHHHHHHHHh
Confidence 45677788887665433 3332 1122356755443 48999999999974 67777888899999999999
Q ss_pred CCCCeEEEcCCCchhhHH----HHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHH
Q 014492 168 DPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243 (423)
Q Consensus 168 ~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i 243 (423)
++||.|+++.|+|..+.. .++..|++++.+|.+ |++++++.++ +++++|++++|+||||.+++.+++.++
T Consensus 99 ~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~-~~t~~v~l~~p~NptG~v~~l~~i~~l 172 (404)
T 1e5e_A 99 KAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTA-----IPGEVKKHMK-PNTKIVYFETPANPTLKIIDMERVCKD 172 (404)
T ss_dssp CTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-----STTHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred CCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-----CHHHHHHhcC-CCCcEEEEECCCCCCCcccCHHHHHHH
Confidence 999999999999998877 678899999999864 7889999997 689999999999999999999999999
Q ss_pred HcC--CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccc-cccccCHHHHH-HHHHhcCCC---CCcH
Q 014492 244 LEM--PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRV-GYGAFPLSIIE-YLWRAKQPY---NVSV 316 (423)
Q Consensus 244 ~~~--~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~-G~i~~~~~~~~-~l~~~~~~~---~~~~ 316 (423)
|+. |+++|+||+|..+.+.. .. ..++++++.|+||.|+++|+|+ ||+++++++++ .+......+ +.++
T Consensus 173 a~~~~~~~li~De~~~~~~~~~-~~----~~~~di~~~S~sK~~~~~g~ri~G~~~~~~~~~~~~l~~~~~~~~g~~~~~ 247 (404)
T 1e5e_A 173 AHSQEGVLVIADNTFCSPMITN-PV----DFGVDVVVHSATKYINGHTDVVAGLICGKADLLQQIRMVGIKDITGSVISP 247 (404)
T ss_dssp HHTSTTCEEEEECTTTCTTTCC-GG----GGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTCCCCCCCCCCCH
T ss_pred HHhhcCCEEEEECCCchhhhCC-cc----ccCCEEEEEcCccccCCCCCCeEEEEEECHHHHHHHHHHHHHhCCCCCCCH
Confidence 976 89999999999877532 22 2367799999999999999998 99999999888 777766554 5788
Q ss_pred HHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCC--------------eec----CCCceEEEEEeCCCCCHHH
Q 014492 317 AAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFL--------------NPY----PSYSNFILCEVTSGMDAKK 378 (423)
Q Consensus 317 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~--------------~~~----p~~~~~~~~~~~~~~~~~~ 378 (423)
+.+.++..+++.. ....++..++.+.+.+.|++.+.+ .+. .+.++|+.+++++ ..++
T Consensus 248 ~~~~~~~~~l~~~---~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~--~~~~ 322 (404)
T 1e5e_A 248 HDAWLITRGLSTL---NIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILKS--GFEG 322 (404)
T ss_dssp HHHHHHHHHHTTH---HHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEETT--HHHH
T ss_pred HHHHHHHHhHhHH---HHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEeCC--CHHH
Confidence 8898888888763 334444556666666666554311 111 1236666668863 1344
Q ss_pred HHHHHHhCCcEEEeCCCC------------------------CC--CCeEEEEecChhhHHHHHHHHhh
Q 014492 379 LKDDLAKMGVMIRHYNNK------------------------EL--KGYVRVSVGKPEHTDALMECLMH 421 (423)
Q Consensus 379 l~~~L~~~gI~v~~~~~~------------------------~~--~~~iRis~~~~~~~~~l~~al~~ 421 (423)
+.+.|.+.||.+...+.. .+ ++++|||++. ++++++.+.|++
T Consensus 323 ~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~-e~~~~li~~l~~ 390 (404)
T 1e5e_A 323 AKKLLDNLKLITLAVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGI-EDADELIADFKQ 390 (404)
T ss_dssp HHHHHHTCSSSEESSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECCS-SCHHHHHHHHHH
T ss_pred HHHHHHhCCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCC-CCHHHHHHHHHH
Confidence 556666889955532110 11 5899999998 667888888765
No 111
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=1.4e-32 Score=268.93 Aligned_cols=306 Identities=19% Similarity=0.133 Sum_probs=234.8
Q ss_pred CCCCHHHHHHHhcC-CCCCCCCC--cc----hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCC----------
Q 014492 107 YGPPPEVREALGQL-KFPYIYPD--PE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDP---------- 169 (423)
Q Consensus 107 ~~~~~~v~~al~~~-~~~~~Y~~--~g----~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~---------- 169 (423)
.+++|++.+++.+. ......+. ++ ..++++.+++++|+++++|++|+|+++++..++.+++.+
T Consensus 40 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~ 119 (397)
T 3f9t_A 40 SNVLPITRKIVDIFLETNLGDPGLFKGTKLLEEKAVALLGSLLNNKDAYGHIVSGGTEANLMALRCIKNIWREKRRKGLS 119 (397)
T ss_dssp CCCCTHHHHHHHHHTTCCTTSGGGBHHHHHHHHHHHHHHHHHTTCTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCcHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhhccc
Confidence 34567888888763 22111111 11 346889999999999999999999999999999988776
Q ss_pred ---CCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC
Q 014492 170 ---GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM 246 (423)
Q Consensus 170 ---gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~ 246 (423)
||+|+++.|+|..+...++..|++++.+|.++++.+|++++++.+.+.++++|++++|+||||.+.+.+++.++|+.
T Consensus 120 ~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~ 199 (397)
T 3f9t_A 120 KNEHPKIIVPITAHFSFEKGREMMDLEYIYAPIKEDYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDNIEELSKIAKE 199 (397)
T ss_dssp CCSSCEEEEETTCCTHHHHHHHHHTCEEEEECBCTTSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCCHHHHHHHHHH
T ss_pred CCCCeEEEECCcchhHHHHHHHHcCceeEEEeeCCCCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999888888999999999984489999999999999999999999999998
Q ss_pred -CCEEEEccCCccccCC--Cc--------hhhhhccCCcEEEEccChhhhcccCccccccccCHH-HHHHHHHhcCC---
Q 014492 247 -PILVVLDEAYTEFSGL--ES--------RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-IIEYLWRAKQP--- 311 (423)
Q Consensus 247 -~~~li~Deay~~~~~~--~~--------~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~-~~~~l~~~~~~--- 311 (423)
|+++|+||+|..+... +. ....... +..+++.|++|.++ +|.|+|+++++++ +.+.+......
T Consensus 200 ~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~K~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 277 (397)
T 3f9t_A 200 NNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSL-GVDSITIDPHKMGH-CPIPSGGILFKDIGYKRYLDVDAPYLTE 277 (397)
T ss_dssp HTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGG-TCSEEECCTTTTTC-CCSSCEEEEESSGGGGGGTCEECTTSSS
T ss_pred hCCeEEEEccccchhhhhcccccccccccccccccc-cCCeEEEccccccC-CCCCceEEEEeCHHHHHhhccCCccccC
Confidence 9999999999865421 11 0111122 45688999999654 7889999888554 44433221111
Q ss_pred ----------CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHH
Q 014492 312 ----------YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKD 381 (423)
Q Consensus 312 ----------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~ 381 (423)
...+..++.++...+. ..++++..++++++++++.+.|++++...+.++.++++++.++ +..++.+
T Consensus 278 ~~~~~~~~~~~~~~~~~~~a~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~---~~~~~~~ 353 (397)
T 3f9t_A 278 TRQATILGTRVGFGGACTYAVLRYLG-REGQRKIVNECMENTLYLYKKLKENNFKPVIEPILNIVAIEDE---DYKEVCK 353 (397)
T ss_dssp SEECSSCSSCCSHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHTTCCBSSCCSSSEEEEECT---THHHHHH
T ss_pred CCccccccccccchHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEcCCCccEEEEEeC---CHHHHHH
Confidence 1124456666666553 3556788888899999999999988543356677889999886 3788999
Q ss_pred HHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 382 DLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 382 ~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
.|.++||.++++.. ++++||+++ +.++++++.++|++
T Consensus 354 ~l~~~gi~v~~~~~---~~~~Ri~~~~~~~~e~i~~~~~~l~~ 393 (397)
T 3f9t_A 354 KLRDRGIYVSVCNC---VKALRIVVMPHIKREHIDNFIEILNS 393 (397)
T ss_dssp HHHHTTCBCEECSS---SSEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred HHHhCCeEEeccCC---CCEEEEEEcCCCCHHHHHHHHHHHHH
Confidence 99999999998763 589999998 55666666666654
No 112
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=100.00 E-value=4e-33 Score=268.61 Aligned_cols=310 Identities=17% Similarity=0.197 Sum_probs=223.0
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhcCCC-CCCC-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCe
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQLKF-PYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK 172 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~~~-~~~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~ 172 (423)
.++|+|+.+.+++ +++.+.+++.+... ...| ++++..+||+++++++|.+ ++++++|+++++.+++.+++++||+
T Consensus 3 ~~~i~~~~~~~~~-p~~~~~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~g~~--~~~~~~~gt~a~~~~~~~~~~~gd~ 79 (347)
T 1jg8_A 3 HMMIDLRSDTVTK-PTEEMRKAMAQAEVGDDVYGEDPTINELERLAAETFGKE--AALFVPSGTMGNQVSIMAHTQRGDE 79 (347)
T ss_dssp --CEECSCGGGCC-CCHHHHHHHHTCCCCCGGGTCCHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHHCCTTCE
T ss_pred ceEEEeccccCCC-CCHHHHHHHhcCCCCCcccCCChHHHHHHHHHHHHhCCc--eEEEecCcHHHHHHHHHHhcCCCCE
Confidence 5679999999988 67899999976422 2245 6778889999999999963 6777888889999999999999999
Q ss_pred EEEcCCCchh-hH--HHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CCceEEEEcCCCCCc-CcCCCHHHHHHH
Q 014492 173 IVDCPPTFTM-YE--FDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKCIFLTSPNNPD-GSIINDEDLLKI 243 (423)
Q Consensus 173 Vl~~~p~y~~-~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~i~l~~p~NPt-G~~~~~~~l~~i 243 (423)
|+++.|+|.. |. ..++..|++++.+ .++++.+|++++++++++ .++++|++++||||| |.+++.+++++|
T Consensus 80 Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~~l~~i 158 (347)
T 1jg8_A 80 VILEADSHIFWYEVGAMAVLSGVMPHPV-PGKNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEI 158 (347)
T ss_dssp EEEETTCHHHHSSTTHHHHHTCCEEEEE-CEETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHHH
T ss_pred EEEcCcchhhhccccchhhccCeEEEEe-cCCCCccCHHHHHHHhccccccccCceEEEEeccccccCCccCcHHHHHHH
Confidence 9999999964 33 2567789999998 545566899999999974 268999999999999 999999877766
Q ss_pred HcC----CCEEEEccCCcccc--C-CCchhhhhccCCcEEEEccChhhhcccCcccc-ccccCHHHHHHHHHhcCC----
Q 014492 244 LEM----PILVVLDEAYTEFS--G-LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVG-YGAFPLSIIEYLWRAKQP---- 311 (423)
Q Consensus 244 ~~~----~~~li~Deay~~~~--~-~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G-~i~~~~~~~~~l~~~~~~---- 311 (423)
++. |+++|+||+|..+. . +..........+. ++.|+||.++++ +| |++.++++++++.+.+..
T Consensus 159 ~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~--~~~s~sK~l~~~---~G~~~~~~~~~~~~~~~~~~~~~~~ 233 (347)
T 1jg8_A 159 CTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADS--VMFCLSKGLCAP---VGSVVVGDRDFIERARKARKMLGGG 233 (347)
T ss_dssp HHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCSE--EEEESSSTTCCS---SCEEEEECHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHCCCEEEeehhhhhcchhhcCCChHHhcccccE--EEEecccccCCC---ceEEEEcCHHHHHHHHHHHHHcCCc
Confidence 553 99999999985321 1 1122222222343 345899988743 67 566788888877654322
Q ss_pred CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCee--cCCCceEEEEEeCC-CCCHHHHHHHHHhCCc
Q 014492 312 YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNP--YPSYSNFILCEVTS-GMDAKKLKDDLAKMGV 388 (423)
Q Consensus 312 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~p~~~~~~~~~~~~-~~~~~~l~~~L~~~gI 388 (423)
...+...+.++..+++. +.+.+. +..++++++.+.|++++ +.+ .+..++|+|++++. +.+..++.+.|.++||
T Consensus 234 ~~~~~~~~~~~~~~l~~--~~~~~~-~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi 309 (347)
T 1jg8_A 234 MRQAGVLAAAGIIALTK--MVDRLK-EDHENARFLALKLKEIG-YSVNPEDVKTNMVILRTDNLKVNAHGFIEALRNSGV 309 (347)
T ss_dssp CSSTHHHHHHHHHHHHH--SSTTHH-HHHHHHHHHHHHHHHHT-CBCCGGGCCSSEEEEECTTSSSCHHHHHHHHHHHTE
T ss_pred hhHHHHHHHHHHHHHHH--HHHHHH-HHHHHHHHHHHHHHhcC-ceeccCCCcceEEEEEcccccCCHHHHHHHHHHCCC
Confidence 23455555555555542 111222 22346677788887663 332 45678899999974 5678999999999999
Q ss_pred EEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 389 MIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 389 ~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
.+++++ .+++||++. +.++++++.++|++
T Consensus 310 ~v~~~~----~~~iRl~~~~~~~~e~i~~~~~~l~~ 341 (347)
T 1jg8_A 310 LANAVS----DTEIRLVTHKDVSRNDIEEALNIFEK 341 (347)
T ss_dssp ECEEEE----TTEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred EEecCC----CCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 999864 578999986 56666666666554
No 113
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=100.00 E-value=8.6e-33 Score=269.14 Aligned_cols=311 Identities=10% Similarity=0.064 Sum_probs=232.2
Q ss_pred CCCCCCCCHHHHHHHhcCCCCCCCCCc--chHHHHHHHHHHhCCCC--CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCC
Q 014492 103 NENPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLES--DHILVGCGADELIDLIMRCVLDPGDKIVDCPP 178 (423)
Q Consensus 103 ~~~~~~~~~~v~~al~~~~~~~~Y~~~--g~~~lr~~ia~~~g~~~--~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p 178 (423)
+..+.+.++++.+++.+....+.++.. ...++++.+++++|++. +.+++|+|++++++.++++++++||+|+++.|
T Consensus 24 ~pgp~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~~~~~gd~vi~~~~ 103 (376)
T 3f0h_A 24 TVGPVMSSEEVRAIGAEQVPYFRTTEFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMNCFTKKDKVLVIDG 103 (376)
T ss_dssp SSSSCCCCHHHHHHHTSCCCCCSSHHHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHHHCCTTCCEEEEES
T ss_pred cCCCCCCcHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHhccCCCCeEEEEeC
Confidence 345677889999999874333344432 24678999999999865 34555999999999999999999999999998
Q ss_pred CchhhH--HHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccC
Q 014492 179 TFTMYE--FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEA 255 (423)
Q Consensus 179 ~y~~~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Dea 255 (423)
.|.... ..+...|++++.++.+.++.+|++++++.+. +++++|++++|+||||.+++.+++.++|+. |+++|+|++
T Consensus 104 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~-~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~ 182 (376)
T 3f0h_A 104 GSFGHRFVQLCEIHEIPYVALKLEHGKKLTKEKLYEYDN-QNFTGLLVNVDETSTAVLYDTMMIGEFCKKNNMFFVCDCV 182 (376)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEECCTTCCCCHHHHHTTTT-SCCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECT
T ss_pred ChhhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHhhc-cCceEEEEecccCCcceecCHHHHHHHHHHcCCEEEEEcC
Confidence 776543 3466789999999988788999999999876 789999999999999999999999999987 999999999
Q ss_pred CccccCCCchhhhhccCCcEEEEccChhhhc-ccCccccccccCHHHHHHHHHhc-------------------CCCCCc
Q 014492 256 YTEFSGLESRMEWVKKHDNLIVLRTFSKRAG-LAGLRVGYGAFPLSIIEYLWRAK-------------------QPYNVS 315 (423)
Q Consensus 256 y~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g-~~G~R~G~i~~~~~~~~~l~~~~-------------------~~~~~~ 315 (423)
|..+..... ....+.++++.|+||.++ .+| +|++++++++++.+.... .+++.+
T Consensus 183 ~~~~~~~~~----~~~~~~d~~~~s~~K~l~~~~G--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (376)
T 3f0h_A 183 SAFLADPFN----MNECGADVMITGSQKVLACPPG--ISVIVLAPRGVERVEKSKVRTMYFDLKDALKNQERGQTPFTPA 256 (376)
T ss_dssp TTTTTSCCC----HHHHTCSEEEEETTTTTCCCSS--CEEEEECHHHHHHHHTCCCCCSTTCHHHHHHHHTTTCCSSCCC
T ss_pred ccccCcccc----ccccCccEEEecCcccccCCCc--eEEEEECHHHHHHhhcCCCCceeecHHHHHhhcccCCCCCCCc
Confidence 986543211 112234588999999997 556 688899999988876422 123455
Q ss_pred HHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeecC-CCceEEEEEeCCCCCHHHHHHHHHhC-CcEE
Q 014492 316 VAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPYP-SYSNFILCEVTSGMDAKKLKDDLAKM-GVMI 390 (423)
Q Consensus 316 ~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p-~~~~~~~~~~~~~~~~~~l~~~L~~~-gI~v 390 (423)
...+.++.++++. ...+++.+++++++++++.+.|++++ +.+.+ ...++++...+.+.+..++.+.|.++ ||.+
T Consensus 257 ~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v 335 (376)
T 3f0h_A 257 VGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKDLP-FELVSESPANGVTSVHPTTANAYDIFLKLKDEYGIWI 335 (376)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTSS-EEECCSSBBTTEEEEEESSSCHHHHHHHHHHHSSEEC
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-CccCccccCceEEEEeCCCCCHHHHHHHHHHhCCEEE
Confidence 5444445555442 22578889999999999999999886 33332 22333332224467899999999976 9999
Q ss_pred EeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 391 RHYNNKELKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 391 ~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
+++.....++++||++. +.++++++.++|++
T Consensus 336 ~~g~~~~~~~~lRis~~~~~t~e~i~~~~~~l~~ 369 (376)
T 3f0h_A 336 CPNGGEMKDTIFRVGHIGALTHEDNTTLVNAFKD 369 (376)
T ss_dssp EECCGGGTTTCEEEECCSSCCHHHHHHHHHHHHH
T ss_pred ecCccccCCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence 98854445789999985 45566666666654
No 114
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=100.00 E-value=1.4e-32 Score=271.16 Aligned_cols=318 Identities=14% Similarity=0.100 Sum_probs=241.2
Q ss_pred CCCCCeeEcCCCC-CCCCCCHHHHHHHhcC--CCC---CCC----CC-cchHHHHHHHHHHhCCCCCcEEEeCCHHHHHH
Q 014492 92 RKPEDIVKIDANE-NPYGPPPEVREALGQL--KFP---YIY----PD-PESRRLRAALAKDSGLESDHILVGCGADELID 160 (423)
Q Consensus 92 ~~~~~~i~l~~~~-~~~~~~~~v~~al~~~--~~~---~~Y----~~-~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~ 160 (423)
.++++++||+.+. ..++++|++.+++.+. .++ ..| +. ....++++++++++|.+. .+++ +++++++.
T Consensus 56 ~~g~~~ld~~s~~~l~~~~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~-~i~~-~sGt~a~~ 133 (409)
T 3kki_A 56 QASPDDIILQSNDYLALANHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFTGFDE-CLLS-QSGWNANV 133 (409)
T ss_dssp CCCTTSEECCCSCTTCCTTCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHHTCSE-EEEE-SCHHHHHH
T ss_pred CCCCceEEeeccCccCCcCCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHhCCCe-EEEe-cchHHHHH
Confidence 3467899998874 2356789998888762 111 111 11 235689999999999753 4555 45569999
Q ss_pred HHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHH
Q 014492 161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL 240 (423)
Q Consensus 161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l 240 (423)
.++.+++++||.|+++.|+|..+...++..|++++.++. .|++++++.+.+.++++|++++|+||||.+++.+++
T Consensus 134 ~~l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~vi~~~~~nptG~~~~l~~l 208 (409)
T 3kki_A 134 GLLQTICQPNTNVYIDFFAHMSLWEGARYANAQAHPFMH-----NNCDHLRMLIQRHGPGIIVVDSIYSTLGTIAPLAEL 208 (409)
T ss_dssp HHHHHHCCTTCEEEEETTSCHHHHHHHHHTTCEEEEECT-----TCHHHHHHHHHHHCSCEEEEESBCTTTCCBCCHHHH
T ss_pred HHHHHhcCCCCEEEECCCcCHHHHHHHHHcCCeEEEecC-----CCHHHHHHHHHhcCCeEEEECCCCCCCCCcCCHHHH
Confidence 999999999999999999999999999999999999873 689999999975568999999999999999999999
Q ss_pred HHHHcC-CCEEEEccCCccccCCCc---hhhhhcc-CCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC----
Q 014492 241 LKILEM-PILVVLDEAYTEFSGLES---RMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP---- 311 (423)
Q Consensus 241 ~~i~~~-~~~li~Deay~~~~~~~~---~~~~~~~-~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~---- 311 (423)
.++|+. |++||+||+|..+.++.. .....+. .+.++++.|+||.++++| ||+++++++++.+......
T Consensus 209 ~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~~g---g~v~~~~~~~~~~~~~~~~~~~~ 285 (409)
T 3kki_A 209 VNISKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFAYRA---GAIWCNNEVNRCVPFISYPAIFS 285 (409)
T ss_dssp HHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEESSSGGGTHHHHCHHHHHS
T ss_pred HHHHHHcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhCCCc---eEEEECHHHHHHHHHhCcCcccc
Confidence 999998 999999999987543321 1122211 234588999999998665 9999999888777654332
Q ss_pred CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEE
Q 014492 312 YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIR 391 (423)
Q Consensus 312 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~ 391 (423)
...++..+.++.++++..+..++.+++++++++++.+.|+++++ .+. +.++++|+.++...+..++.+.|.++||.+.
T Consensus 286 ~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~-~~~~~~~~~~~~~~~~~~~~~~L~~~Gv~v~ 363 (409)
T 3kki_A 286 STLLPYEAAGLETTLEIIESADNRRQHLDRMARKLRIGLSQLGL-TIR-SESQIIGLETGDERNTEKVRDYLESNGVFGS 363 (409)
T ss_dssp BCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTTC-CCC-CSSSEEEEEEESHHHHHHHHHHHHHTTEECE
T ss_pred CCCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcCC-ccC-CCCCEEEEEeCCHHHHHHHHHHHHHCCceEe
Confidence 24567777777777765444467888999999999999998864 333 5788999998754456789999998999998
Q ss_pred eCCC---CCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 392 HYNN---KELKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 392 ~~~~---~~~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
++.. +...+++||+++ +.++++++.++|++
T Consensus 364 ~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~ 399 (409)
T 3kki_A 364 VFCRPATSKNKNIIRLSLNSDVNDEQIAKIIEVCSD 399 (409)
T ss_dssp EECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred eeCCCCcCCCCcEEEEEccCCCCHHHHHHHHHHHHH
Confidence 7554 234679999997 45555555555543
No 115
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=100.00 E-value=1e-32 Score=270.46 Aligned_cols=311 Identities=15% Similarity=0.213 Sum_probs=235.6
Q ss_pred CCCCCeeEcCCCCCCCC---CCHHHHHHHhcC-C---CC-CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492 92 RKPEDIVKIDANENPYG---PPPEVREALGQL-K---FP-YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (423)
Q Consensus 92 ~~~~~~i~l~~~~~~~~---~~~~v~~al~~~-~---~~-~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~ 163 (423)
..+++++|+..+.++.. .+|++.+++.+. . +. ..|+++...++++.+++++| ++++++++|+++++..++
T Consensus 33 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g--~~~v~~~~~gt~a~~~al 110 (392)
T 3ruy_A 33 PEGNRYMDLLSAYSAVNQGHRHPKIINALIDQANRVTLTSRAFHSDQLGPWYEKVAKLTN--KEMVLPMNTGAEAVETAI 110 (392)
T ss_dssp TTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSCCCTTSEETTHHHHHHHHHHHHT--CSEEEEESSHHHHHHHHH
T ss_pred CCCCEEEEcCCChhhhccCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhcC--CCEEEEeCcHHHHHHHHH
Confidence 45677899988755543 579999888762 2 11 22445567899999999998 689999999999999999
Q ss_pred HHhcCC----------CCeEEEcCCCchhhHHHHHHCCC-------------eEEEecCCCCCCCCHHHHHHHhhcCCce
Q 014492 164 RCVLDP----------GDKIVDCPPTFTMYEFDAAVNGA-------------AVVKVPRKSDFSLNVELIADAVEREKPK 220 (423)
Q Consensus 164 ~~l~~~----------gd~Vl~~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~d~~~l~~~i~~~~~~ 220 (423)
+.+..+ +|.|++..|+|+.+...+...+. .+..++. .|++++++.++ .+++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~-~~~~ 184 (392)
T 3ruy_A 111 KTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPY-----GDLEALKAAIT-PNTA 184 (392)
T ss_dssp HHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECT-----TCHHHHHHHCC-TTEE
T ss_pred HHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCc-----ccHHHHHHHhc-cCeE
Confidence 977644 67999999999766555544322 2444442 27999999997 7899
Q ss_pred EEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCchh--hhhccCCcEEEEccChhhhcccC-ccc
Q 014492 221 CIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAG-LRV 292 (423)
Q Consensus 221 ~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~i~S~SK~~g~~G-~R~ 292 (423)
+|++++|+||||.+++ .+++.++|+. |+++|+||+|.+|...+... ...+...+++ |+||.++ +| +|+
T Consensus 185 ~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~---~~SK~l~-gG~~~~ 260 (392)
T 3ruy_A 185 AFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFACDWDNVTPDMY---ILGKALG-GGVFPI 260 (392)
T ss_dssp EEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE---EECGGGG-TTTSCC
T ss_pred EEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccchhhhccCCCCCEE---EEchhhh-CChhhh
Confidence 9999999999999998 8888888887 99999999998776543222 2222223433 6789875 46 999
Q ss_pred cccccCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC--CCeecCCCceEEEE
Q 014492 293 GYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP--FLNPYPSYSNFILC 368 (423)
Q Consensus 293 G~i~~~~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~~~~p~~~~~~~~ 368 (423)
||+++++++++.+..... .++.+++++.++.++++..+. ++.+++++++++++.+.|++++ .+...++.++|+++
T Consensus 261 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~ 339 (392)
T 3ruy_A 261 SCAAANRDILGVFEPGSHGSTFGGNPLACAVSIAALEVLEE-EKLTERSLQLGEKLVGQLKEIDNPMITEVRGKGLFIGI 339 (392)
T ss_dssp EEEEECHHHHTTCCTTSSCCSSTTCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHTTCCCTTEEEEEEETTEEEE
T ss_pred EEEEECHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHhcCCCceEEEeeeeEEEE
Confidence 999999998887765443 478899999999999875433 6778889999999999999874 33344556888888
Q ss_pred EeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 369 EVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 369 ~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
.+++ +..++.+.|.++||.+++++ ++++||+++ +.++++++.++|++
T Consensus 340 ~~~~--~~~~l~~~l~~~gi~v~~~~----~~~iRi~~~~~~~~~~i~~~~~~l~~ 389 (392)
T 3ruy_A 340 ELNE--PARPYCEQLKAAGLLCKETH----ENVIRIAPPLVISEEDLEWAFQKIKA 389 (392)
T ss_dssp EESS--CSHHHHHHHHTTTEECCCBT----TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred EEcc--hHHHHHHHHHHCCcEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 8874 77899999999999999876 689999944 45555555555554
No 116
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=100.00 E-value=4.6e-33 Score=275.80 Aligned_cols=322 Identities=13% Similarity=0.100 Sum_probs=225.2
Q ss_pred CCCCCeeEcCCCCC--CCC-CCHHHHHHHhc-CCC-C----CCCCCcchHHHHHHHHHHh-CCCCCcEEEeCCHHHHHHH
Q 014492 92 RKPEDIVKIDANEN--PYG-PPPEVREALGQ-LKF-P----YIYPDPESRRLRAALAKDS-GLESDHILVGCGADELIDL 161 (423)
Q Consensus 92 ~~~~~~i~l~~~~~--~~~-~~~~v~~al~~-~~~-~----~~Y~~~g~~~lr~~ia~~~-g~~~~~i~~t~G~~~al~~ 161 (423)
..+.+++|+..+.+ +++ ++|++.+++.+ +.. . ..|+..+..+|++++++++ +-.+++|++|+|+++++..
T Consensus 38 ~~g~~~id~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~ 117 (426)
T 1sff_A 38 VEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVEN 117 (426)
T ss_dssp TTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHH
T ss_pred CCCCEEEEcccChhhcccCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCcccccEEEEeCchHHHHHH
Confidence 34567899987754 555 67889998876 321 1 1246667889999999999 5224899999999999999
Q ss_pred HHH---HhcCCCCeEEEcCCCchhhH-HHHHHCCCe-------------EEEecCCC-----CCCCCHHHHHHHhhc---
Q 014492 162 IMR---CVLDPGDKIVDCPPTFTMYE-FDAAVNGAA-------------VVKVPRKS-----DFSLNVELIADAVER--- 216 (423)
Q Consensus 162 ~~~---~l~~~gd~Vl~~~p~y~~~~-~~~~~~g~~-------------~~~v~~~~-----~~~~d~~~l~~~i~~--- 216 (423)
+++ .++++| .|++.+|+|+.+. ......|.+ ++.+|.+. ++.+|++++++.+++
T Consensus 118 ~~~~a~~~~~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~ 196 (426)
T 1sff_A 118 AVKIARAATKRS-GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAA 196 (426)
T ss_dssp HHHHHHHHHTCC-EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHhhCCC-eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhccC
Confidence 988 677776 8999999997644 455556653 67777543 223689999998863
Q ss_pred -CCceEEEEc-CCCCCcC-cCCCHHHHHHH---HcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccC
Q 014492 217 -EKPKCIFLT-SPNNPDG-SIINDEDLLKI---LEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAG 289 (423)
Q Consensus 217 -~~~~~i~l~-~p~NPtG-~~~~~~~l~~i---~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G 289 (423)
.++++|+++ +++| || .+++.+++++| |+. |++||+||+|.+|.+.+... ..+..+..+.+.||||.+|. |
T Consensus 197 ~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~~~di~s~sK~~~~-G 273 (426)
T 1sff_A 197 PEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLF-AMEQMGVAPDLTTFAKSIAG-G 273 (426)
T ss_dssp GGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGTTSCCSEEEECGGGGT-S
T ss_pred CCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccchh-hhhhcCCCCCEEEEcccccC-C
Confidence 467788875 6678 99 55565555555 444 99999999999876533211 11122222334499999996 9
Q ss_pred ccccccccCHHHHHHHHHh--cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc----CCCCeecCCCc
Q 014492 290 LRVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKD----VPFLNPYPSYS 363 (423)
Q Consensus 290 ~R~G~i~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~p~~~ 363 (423)
+|+||+++++++++.+... ...++.+++++.++.++|+..+. +...++++++++++.+.|++ ++.+...++.|
T Consensus 274 lriG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~aal~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g 352 (426)
T 1sff_A 274 FPLAGVTGRAEVMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQ-ENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRGLG 352 (426)
T ss_dssp SCCEEEEEEHHHHTTSCTTSBCCSSSSCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEET
T ss_pred CceEEEEEcHHHHhhhccCCcCcCCCCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEE
Confidence 9999999999988776532 23467899999998887753211 23456667777777777755 44333233458
Q ss_pred eEEEEEeC--------CCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014492 364 NFILCEVT--------SGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM 420 (423)
Q Consensus 364 ~~~~~~~~--------~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~ 420 (423)
+|+|++++ .+.+..++.+.|.++||.++++.. .++++||+++ +.++++++.++|+
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~--~~~~iRi~~~~~~~~~~i~~~~~~l~ 418 (426)
T 1sff_A 353 AMIAIELFEDGDHNKPDAKLTAEIVARARDKGLILLSCGP--YYNVLRILVPLTIEDAQIRQGLEIIS 418 (426)
T ss_dssp TEEEEEEBGGGCTTSBCHHHHHHHHHHHHHTTEECEEEST--TSCEEEECCCTTCCHHHHHHHHHHHH
T ss_pred EEEEEEEecCccccCCChHHHHHHHHHHHHCCcEEecCCC--CCCEEEEECCccCCHHHHHHHHHHHH
Confidence 99999984 223567899999999999999764 2689999986 4555555555444
No 117
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=100.00 E-value=3.3e-32 Score=267.86 Aligned_cols=317 Identities=15% Similarity=0.169 Sum_probs=240.1
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCCc----chH---HHH----HHHHHHhCCCCCcEEEeCCHHHHHH
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQL-K--FPYIYPDP----ESR---RLR----AALAKDSGLESDHILVGCGADELID 160 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~Y~~~----g~~---~lr----~~ia~~~g~~~~~i~~t~G~~~al~ 160 (423)
.++++|..+++++ +|.+.+++.+. . ...+||+. |.+ .++ +.+++++|.++++|++++|+. ++.
T Consensus 23 ~~~i~~~~~~~~~--~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g~~~~~i~~~sGt~-a~~ 99 (407)
T 2dkj_A 23 REGLELIASENFV--SKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGAAWANVQPHSGSQ-ANM 99 (407)
T ss_dssp HTSEECCTTCCCC--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHH-HHH
T ss_pred hcceeeccCCCCC--CHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhCCCcceEEecchHH-HHH
Confidence 3579999999988 79999999873 2 23456543 222 233 488899998876777788765 999
Q ss_pred HHHHHhcCCCCeEEEcCCCchhh---HHHHHHCCC--eEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcC
Q 014492 161 LIMRCVLDPGDKIVDCPPTFTMY---EFDAAVNGA--AVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI 234 (423)
Q Consensus 161 ~~~~~l~~~gd~Vl~~~p~y~~~---~~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~ 234 (423)
.+++.++++||+|+++.|+|+.+ ...++..|. ..+.++.+ +++.+|++++++.+.+.++++|++++|+|| .+
T Consensus 100 ~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~p~~~--~~ 177 (407)
T 2dkj_A 100 AVYMALMEPGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALEHRPKVIVAGASAYP--RF 177 (407)
T ss_dssp HHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCTTTSSCCHHHHHHHHHHHCCSEEEECCSSCC--SC
T ss_pred HHHHHhcCCCCEEEEecccccCccchHHHHHhcCceEEEEecCCCcccCccCHHHHHHHHhhcCCeEEEEeccccC--CC
Confidence 99999999999999999999877 333444455 45555543 367899999999997447999999999997 78
Q ss_pred CCHHHHHHHHcC-CCEEEEccCCcc-ccCCCchhhhhccCCcEEEEccChhhhcccCccccccccC-HHHHHHHHHhcCC
Q 014492 235 INDEDLLKILEM-PILVVLDEAYTE-FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP 311 (423)
Q Consensus 235 ~~~~~l~~i~~~-~~~li~Deay~~-~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~-~~~~~~l~~~~~~ 311 (423)
.+.+++.++|+. |+++|+||+|.. +.+.+....... ..++++.|+||. ++|.|+||++++ +++++.+......
T Consensus 178 ~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~--~~di~~~s~sK~--l~g~~~G~~~~~~~~~~~~l~~~~~~ 253 (407)
T 2dkj_A 178 WDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLP--YAHVVTSTTHKT--LRGPRGGLILSNDPELGKRIDKLIFP 253 (407)
T ss_dssp CCHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCTT--TCSEEEEESSGG--GCCCSCEEEEESCHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHcCCEEEEEccccccccccCccCCccc--cccEEEEecccc--CCCCCceEEEECCHHHHHHHHhhhcc
Confidence 899999999988 999999999987 432221111111 246889999994 468999999999 8999888776654
Q ss_pred C---CCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeec--CCCceEEEEEeCC-CCCHHHHHHHH
Q 014492 312 Y---NVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPY--PSYSNFILCEVTS-GMDAKKLKDDL 383 (423)
Q Consensus 312 ~---~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~--p~~~~~~~~~~~~-~~~~~~l~~~L 383 (423)
+ +.+.....++.++++. .+++++.+++++++++++.+.|++++ +.+. ++.++|+|+++++ +.+..++.+.|
T Consensus 254 ~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 332 (407)
T 2dkj_A 254 GIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARRG-YRIVTGGTDNHLFLVDLRPKGLTGKEAEERL 332 (407)
T ss_dssp TTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTT-CEEGGGSCSSSEEEEECGGGTCCHHHHHHHH
T ss_pred cccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhCC-ceeecCCCCceEEEEECcccCCCHHHHHHHH
Confidence 3 3444444455666654 35778899999999999999999884 5544 5688999999974 45788999999
Q ss_pred HhCCcEEEeCCC------CCCCCeEEEEe-------cChhhHHHHHHHHhh
Q 014492 384 AKMGVMIRHYNN------KELKGYVRVSV-------GKPEHTDALMECLMH 421 (423)
Q Consensus 384 ~~~gI~v~~~~~------~~~~~~iRis~-------~~~~~~~~l~~al~~ 421 (423)
.++||.++++.. ...++++||++ .+.++++++.++|++
T Consensus 333 ~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~ 383 (407)
T 2dkj_A 333 DAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDR 383 (407)
T ss_dssp HHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHH
T ss_pred HHcCceecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHHHHH
Confidence 999999998753 22467999998 467777888777765
No 118
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=100.00 E-value=1.8e-32 Score=271.27 Aligned_cols=313 Identities=16% Similarity=0.171 Sum_probs=222.2
Q ss_pred CCCCCeeEcCCCC--CCCCC--CHHHHHHHhc-CCCC-----CCCCCcchHHHHHHHHHHhCCC-CCcEEEeCCHHHHHH
Q 014492 92 RKPEDIVKIDANE--NPYGP--PPEVREALGQ-LKFP-----YIYPDPESRRLRAALAKDSGLE-SDHILVGCGADELID 160 (423)
Q Consensus 92 ~~~~~~i~l~~~~--~~~~~--~~~v~~al~~-~~~~-----~~Y~~~g~~~lr~~ia~~~g~~-~~~i~~t~G~~~al~ 160 (423)
..+..++|+..+. ++++. +|++.+++.+ +... ..|+++...++++.+++++|++ +++|++|+|+++++.
T Consensus 39 ~~g~~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~ea~~ 118 (419)
T 2eo5_A 39 VDGNKYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKLAHAAANDFYNIPQLELAKKLVTYSPGNFQKKVFFSNSGTEAIE 118 (419)
T ss_dssp TTSCEEEESSGGGGTTTTCBSCCHHHHHHHHHHHTTSCCCSCSCSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHH
T ss_pred CCCCEEEEccCChhhhccCCCCCHHHHHHHHHHHhhCccccccccCCHHHHHHHHHHHHhCCCCcCCEEEEeCchHHHHH
Confidence 3456789998876 56765 6999998876 2211 2366655678999999999987 789999999999999
Q ss_pred HHHHHhcC-CCCeEEEcCCCchhhHHH-HHHCC-------------CeEEEecCCCCCC----------------CCHHH
Q 014492 161 LIMRCVLD-PGDKIVDCPPTFTMYEFD-AAVNG-------------AAVVKVPRKSDFS----------------LNVEL 209 (423)
Q Consensus 161 ~~~~~l~~-~gd~Vl~~~p~y~~~~~~-~~~~g-------------~~~~~v~~~~~~~----------------~d~~~ 209 (423)
.+++.+.. +||+|++..|+|+.+... ....| ..++.+|.++++. +|+++
T Consensus 119 ~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 198 (419)
T 2eo5_A 119 ASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVIEF 198 (419)
T ss_dssp HHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccccccchhhHHHHHHH
Confidence 99987654 389999999999754433 22222 3577777654432 36889
Q ss_pred HH-HHhhc----CCceEEEEcCC-CCCcCcCC-C---HHHHHHHHcC-CCEEEEccCCccccCCCc--hhhhhccCCcEE
Q 014492 210 IA-DAVER----EKPKCIFLTSP-NNPDGSII-N---DEDLLKILEM-PILVVLDEAYTEFSGLES--RMEWVKKHDNLI 276 (423)
Q Consensus 210 l~-~~i~~----~~~~~i~l~~p-~NPtG~~~-~---~~~l~~i~~~-~~~li~Deay~~~~~~~~--~~~~~~~~~~~i 276 (423)
++ +.+++ .++++|+ ++| |||||.+. + .+++.++|+. |+++|+||+|.+|...+. ........++++
T Consensus 199 l~~~~i~~~~~~~~~~~vi-~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~~~d~~ 277 (419)
T 2eo5_A 199 IEDYIFVNLVPPEEVAGIF-FEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLFAIENFNTVPDVI 277 (419)
T ss_dssp HHHTHHHHTCCGGGEEEEE-ECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE
T ss_pred HHHHHHhhccCCCCEEEEE-EeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchhhHHhcCCCCCEE
Confidence 99 88863 2455555 555 56789755 5 4455555554 999999999998864332 122223334433
Q ss_pred EEccChhhhcccC-ccccccccCHHHHHHHH-HhcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC
Q 014492 277 VLRTFSKRAGLAG-LRVGYGAFPLSIIEYLW-RAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP 354 (423)
Q Consensus 277 ~i~S~SK~~g~~G-~R~G~i~~~~~~~~~l~-~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 354 (423)
||||.++ +| +|+||++++++++ .+. ....+++.+++++.++.++|+. .++.+++++++++++.+.|+++
T Consensus 278 ---t~sK~~~-~G~~riG~~~~~~~~~-~~~~~~~~t~~~n~~~~~aa~aal~~---~~~~~~~~~~~~~~l~~~L~~~- 348 (419)
T 2eo5_A 278 ---TLAKALG-GGIMPIGATIFRKDLD-FKPGMHSNTFGGNALACAIGSKVIDI---VKDLLPHVNEIGKIFAEELQGL- 348 (419)
T ss_dssp ---EECGGGG-TTTSCCEEEEEEGGGC-CC------CCCCCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHTTS-
T ss_pred ---Eeccccc-CCccceEEEEEchHhh-cCCcccCCCCCCCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHh-
Confidence 7999999 59 9999999998877 552 2234578899999999999864 2337888999999999999887
Q ss_pred CCeecCCCceEEEEEeC-CCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014492 355 FLNPYPSYSNFILCEVT-SGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM 420 (423)
Q Consensus 355 ~~~~~p~~~~~~~~~~~-~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~ 420 (423)
+...++.|+|+++++. ...... +.+.|.++||.+++++ ++++||+++ +.++++++.++|+
T Consensus 349 -~~~~~~~g~~~~i~~~~~~~~~~-~~~~l~~~Gv~v~~~~----~~~lRis~~~~~t~e~i~~~l~~l~ 412 (419)
T 2eo5_A 349 -ADDVRGIGLAWGLEYNEKKVRDR-IIGESFKRGLLLLPAG----RSAIRVIPPLVISEEEAKQGLDILK 412 (419)
T ss_dssp -SSEEEEETTEEEEECSCHHHHHH-HHHHHHHTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred -hhheEeeeEEEEEEEecCccHHH-HHHHHHHCCCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHH
Confidence 3333567889999983 212345 8888889999999875 579999865 4555555555544
No 119
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=100.00 E-value=5.7e-32 Score=268.43 Aligned_cols=320 Identities=13% Similarity=0.134 Sum_probs=227.6
Q ss_pred CCCCCeeEcCCCC--CCCC-CCHHHHHHHhcC-C-CC----CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492 92 RKPEDIVKIDANE--NPYG-PPPEVREALGQL-K-FP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (423)
Q Consensus 92 ~~~~~~i~l~~~~--~~~~-~~~~v~~al~~~-~-~~----~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~ 162 (423)
..+..++|+..+. ++++ .+|++.+++.+. . .. .+|+.....++++++++++++++++|++|+|++++++.+
T Consensus 40 ~~g~~ylD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggtea~~~a 119 (429)
T 1s0a_A 40 SDGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVA 119 (429)
T ss_dssp TTSCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHHCSCCCCSSEECHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHH
T ss_pred CCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHH
Confidence 3456789998876 5666 579999888762 1 11 245555567899999999998889999999999999999
Q ss_pred HHHhc---C----CCCeEEEcCCCchhhHHHHHH-C---------------CCeEEEecCC---CCC-CCCHHHHHHHhh
Q 014492 163 MRCVL---D----PGDKIVDCPPTFTMYEFDAAV-N---------------GAAVVKVPRK---SDF-SLNVELIADAVE 215 (423)
Q Consensus 163 ~~~l~---~----~gd~Vl~~~p~y~~~~~~~~~-~---------------g~~~~~v~~~---~~~-~~d~~~l~~~i~ 215 (423)
++.+. + |||+|++..|+|+.+...+.. . +...+.++.. +.+ .+|++++++.++
T Consensus 120 i~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~ 199 (429)
T 1s0a_A 120 MKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMA 199 (429)
T ss_dssp HHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHH
T ss_pred HHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHH
Confidence 98653 2 689999999999865443322 1 2344444321 133 489999999986
Q ss_pred c--CCceEEEEcCC-CCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCc--hhhhhccCCcEEEEccChhhh
Q 014492 216 R--EKPKCIFLTSP-NNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVLRTFSKRA 285 (423)
Q Consensus 216 ~--~~~~~i~l~~p-~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~i~S~SK~~ 285 (423)
+ .++++|+++.+ +||||.+.+ .+++.++|+. |+++|+||+|.+|...+. .........+++ |+||.+
T Consensus 200 ~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~~~~~~~~~~d~~---t~sK~l 276 (429)
T 1s0a_A 200 AHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDIL---CLGKAL 276 (429)
T ss_dssp HHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE---EECGGG
T ss_pred hCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHHHhhhcCCCCCEE---Eecccc
Confidence 4 45666665444 699997665 5555566665 999999999998754332 122222233433 789999
Q ss_pred cccC-ccccccccCHHHHHHHHHh-------cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccC---C
Q 014492 286 GLAG-LRVGYGAFPLSIIEYLWRA-------KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDV---P 354 (423)
Q Consensus 286 g~~G-~R~G~i~~~~~~~~~l~~~-------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~---~ 354 (423)
+ +| +|+||+++++++++.+... ...++.|++++.++.++++..+- +...++++++++++.+.|+++ +
T Consensus 277 ~-~G~~~iG~~~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~ 354 (429)
T 1s0a_A 277 T-GGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILES-GDWQQQVADIEVQLREQLAPARDAE 354 (429)
T ss_dssp G-TSSSCCEEEEECHHHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHHHHGGGGGCT
T ss_pred c-CCCccceEEEeCHHHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHhcCC
Confidence 8 68 9999999999999888763 23467899999988888863110 245677778888999888775 3
Q ss_pred CCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 355 FLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 355 ~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
.+...++.|+|+|++++++.+..++.+.|.++||.++++ .+++||+++ +.++++++.++|++
T Consensus 355 ~~~~~~~~g~~~~~~~~~~~~~~~l~~~l~~~Gi~v~~~-----~~~iRis~~~~~t~e~i~~~~~~l~~ 419 (429)
T 1s0a_A 355 MVADVRVLGAIGVVETTHPVNMAALQKFFVEQGVWIRPF-----GKLIYLMPPYIILPQQLQRLTAAVNR 419 (429)
T ss_dssp TEEEEEEETTEEEEEESSCBCHHHHHHHHHHTTEECCCB-----TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred CEEEEEEeeEEEEEEECCcccHHHHHHHHHHCCCEEecc-----CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 333334567899999976567889999999999999875 279999954 55566666666554
No 120
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=100.00 E-value=9.2e-33 Score=274.25 Aligned_cols=325 Identities=14% Similarity=0.097 Sum_probs=214.4
Q ss_pred CCCCCeeEcCCC--CCCCCC-CHHHHHHHhc-CC-CC----CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492 92 RKPEDIVKIDAN--ENPYGP-PPEVREALGQ-LK-FP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (423)
Q Consensus 92 ~~~~~~i~l~~~--~~~~~~-~~~v~~al~~-~~-~~----~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~ 162 (423)
..++.++|+..+ .++++. +|++.+++.+ +. .. ..|+++...+++++++++++.++++|++|+|+++++..+
T Consensus 26 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~a 105 (430)
T 3i4j_A 26 DAGRRYLDGSSGALVANIGHGRAEVGERMAAQAARLPFVHGSQFSSDVLEEYAGRLARFVGLPTFRFWAVSGGSEATESA 105 (430)
T ss_dssp TTSCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCCCCCTTTCEEHHHHHHHHHHHHHTTCTTCEEEEESSHHHHHHHH
T ss_pred CCCCEEEECCCchhccccCCCCHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHH
Confidence 345778999887 667765 8899888865 21 11 234555567899999999998889999999999999999
Q ss_pred HHHhc--------CCCCeEEEcCCCchhhHHHHHHCCC---------------eEEEecCCCC---CCCCHHHHHHHhhc
Q 014492 163 MRCVL--------DPGDKIVDCPPTFTMYEFDAAVNGA---------------AVVKVPRKSD---FSLNVELIADAVER 216 (423)
Q Consensus 163 ~~~l~--------~~gd~Vl~~~p~y~~~~~~~~~~g~---------------~~~~v~~~~~---~~~d~~~l~~~i~~ 216 (423)
++.++ .+++.|++.+|+|+.+...+...+. .+..+|.++. ...|+++|++.+++
T Consensus 106 l~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~ 185 (430)
T 3i4j_A 106 VKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLER 185 (430)
T ss_dssp HHHHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEECCCCTTSCHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHh
Confidence 99876 3478999999999877765544333 2233332222 12366888888863
Q ss_pred ---CCceEEEEcCCCC-CcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch--hhhh-ccCCcEEEEccChhh
Q 014492 217 ---EKPKCIFLTSPNN-PDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWV-KKHDNLIVLRTFSKR 284 (423)
Q Consensus 217 ---~~~~~i~l~~p~N-PtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~-~~~~~~i~i~S~SK~ 284 (423)
.++++|+++.++| ++|...+ .+++.++|+. |++||+||+|.+|...+.. .... +..++ +.+|||.
T Consensus 186 ~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~~~~d---i~t~sK~ 262 (430)
T 3i4j_A 186 EGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPLALSRWSGVTPD---IAVLGKG 262 (430)
T ss_dssp HCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTTCCCS---EEEECGG
T ss_pred cCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhhhhcCCCCc---EEEEccc
Confidence 3455666556667 8998665 5556666666 9999999999988654322 1222 22233 3368999
Q ss_pred hcccC-ccccccccCHHHHHHHHHh------cCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCC
Q 014492 285 AGLAG-LRVGYGAFPLSIIEYLWRA------KQPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVP 354 (423)
Q Consensus 285 ~g~~G-~R~G~i~~~~~~~~~l~~~------~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~ 354 (423)
++ +| +|+||+++++++++.+.+. ..+++.+++++.++.++|+. +++.++.++..+..++.+.+.+++++
T Consensus 263 l~-~G~~r~G~~~~~~~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 341 (430)
T 3i4j_A 263 LA-AGYAPLAGLLAAPQVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVEREDLTGAAKERGAQLLAGLQALQARFP 341 (430)
T ss_dssp GT-TTSSCCEEEEECHHHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred cc-CCccccEEEEECHHHHHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 98 59 9999999999999999863 34578899999999998874 34455555555555566666555666
Q ss_pred CCeecCCCceEEEEEeCCC---------CCHHHHHHHHHhCCcEEEeCCC---CCCCCeEEEEec---ChhhHHHHHHHH
Q 014492 355 FLNPYPSYSNFILCEVTSG---------MDAKKLKDDLAKMGVMIRHYNN---KELKGYVRVSVG---KPEHTDALMECL 419 (423)
Q Consensus 355 ~~~~~p~~~~~~~~~~~~~---------~~~~~l~~~L~~~gI~v~~~~~---~~~~~~iRis~~---~~~~~~~l~~al 419 (423)
.+...++.|+|+++.+++. ....++++.|.++||.++++.. ...++++||+++ +.++++++.++|
T Consensus 342 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l 421 (430)
T 3i4j_A 342 QMMQVRGTGLLLGVVLGDLATGQAFETPGIASRIGAAALKRGLITYPGSGAEPNGRGDHLLLGPPLSITAAEVDGLLALL 421 (430)
T ss_dssp TEEEEEEETTEEEEEEC------------CHHHHHHHHHHTTEECC-----------CEEEECCCTTCCHHHHHHHHHHH
T ss_pred CeEEEEEEEEEEEEEeccccccCCCccHHHHHHHHHHHHhCCCEEEecccccCCCCCCEEEEECCCCCCHHHHHHHHHHH
Confidence 6665667788999988521 1236789999999999998732 223679999976 344444444444
Q ss_pred h
Q 014492 420 M 420 (423)
Q Consensus 420 ~ 420 (423)
+
T Consensus 422 ~ 422 (430)
T 3i4j_A 422 A 422 (430)
T ss_dssp H
T ss_pred H
Confidence 3
No 121
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=100.00 E-value=2.7e-32 Score=267.66 Aligned_cols=312 Identities=17% Similarity=0.167 Sum_probs=232.4
Q ss_pred CCCCeeEcCCCC--CCCC-CCHHHHHHHhcC----CC-CCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHH
Q 014492 93 KPEDIVKIDANE--NPYG-PPPEVREALGQL----KF-PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (423)
Q Consensus 93 ~~~~~i~l~~~~--~~~~-~~~~v~~al~~~----~~-~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~ 164 (423)
.+..++|++.+. ++++ ++|.+.+++.+. .. ...|+.+...++++++++++++++++|++|+|+++++..+++
T Consensus 43 ~g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~~a~~~al~ 122 (395)
T 1vef_A 43 EGNEYIDCVGGYGVANLGHGNPEVVEAVKRQAETLMAMPQTLPTPMRGEFYRTLTAILPPELNRVFPVNSGTEANEAALK 122 (395)
T ss_dssp TSCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCCCCCTTSCCHHHHHHHHHHHHTSCTTEEEEEEESSHHHHHHHHHH
T ss_pred CCCEEEEccCccccccCCCCCHHHHHHHHHHHHhCCCCccccCCHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHH
Confidence 456789998875 6776 789998888762 11 123566667899999999998888899999999999999998
Q ss_pred Hhc--CCCCeEEEcCCCchh-hHHHHHHCCCe------------EEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCC
Q 014492 165 CVL--DPGDKIVDCPPTFTM-YEFDAAVNGAA------------VVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNN 229 (423)
Q Consensus 165 ~l~--~~gd~Vl~~~p~y~~-~~~~~~~~g~~------------~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~N 229 (423)
++. .+||.|++.+|+|+. +...++..|.+ +..++ ..|++++++.++ .++++|++++++|
T Consensus 123 ~~~~~~~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~-----~~d~~~l~~~i~-~~~~~v~~~~~~~ 196 (395)
T 1vef_A 123 FARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIP-----YNDVEALKRAVD-EETAAVILEPVQG 196 (395)
T ss_dssp HHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEEC-----TTCHHHHHHHCC-TTEEEEEECSEET
T ss_pred HHHHHhCCCeEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeC-----CCcHHHHHHHhc-cCEEEEEEeCccC
Confidence 764 578999999999964 44455666765 33333 248999999997 6889988877789
Q ss_pred CcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEEEccChhhhcccCccccccccCHHHH
Q 014492 230 PDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII 302 (423)
Q Consensus 230 PtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~ 302 (423)
|||.+++ .+++.++|+. |++||+||+|.++...+.. ....+...+++ ||||.++. |+|+||++++++++
T Consensus 197 ~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~d~~---s~sK~~~~-g~~~G~~~~~~~~~ 272 (395)
T 1vef_A 197 EGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGIVPDIL---TLAKALGG-GVPLGVAVMREEVA 272 (395)
T ss_dssp TTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE---EECGGGGT-TSSCEEEEEEHHHH
T ss_pred CCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchhHhhhcCCCCCEE---EEcccccC-CCceEEEEehHHHH
Confidence 9999876 6667777776 9999999999976533221 22222233433 78999995 99999999999887
Q ss_pred HHHHH--hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCC--CeecCCCceEEEEEeCCCCCHHH
Q 014492 303 EYLWR--AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPF--LNPYPSYSNFILCEVTSGMDAKK 378 (423)
Q Consensus 303 ~~l~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~--~~~~p~~~~~~~~~~~~~~~~~~ 378 (423)
+.+.. ....++.+++++.++.++++..+. +...++++++++++.+.|++++. +...++.++|+|+++++ +..+
T Consensus 273 ~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~g~~~~~~~~~--~~~~ 349 (395)
T 1vef_A 273 RSMPKGGHGTTFGGNPLAMAAGVAAIRYLER-TRLWERAAELGPWFMEKLRAIPSPKIREVRGMGLMVGLELKE--KAAP 349 (395)
T ss_dssp HTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH-HTTHHHHHHHHHHHHHHHHTSCCTTEEEEEEETTEEEEEESS--CSHH
T ss_pred hhhccCCcCCCcCCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHhhcCceEEEEEEEEEEEEEEcC--hHHH
Confidence 76654 233467889999888888864332 45678888999999999988754 12234567899999974 3678
Q ss_pred HHHHHH-hCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 379 LKDDLA-KMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 379 l~~~L~-~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
+.+.|. ++||.+++++ ++++||+++ +.++++++.++|++
T Consensus 350 l~~~l~~~~gi~v~~~~----~~~iRi~~~~~~~~~~i~~~~~~l~~ 392 (395)
T 1vef_A 350 YIARLEKEHRVLALQAG----PTVIRFLPPLVIEKEDLERVVEAVRA 392 (395)
T ss_dssp HHHHHHHHHCEECEESS----TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCeEEecCC----CCEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 999999 9999999864 689999875 44455555555543
No 122
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=100.00 E-value=2.5e-31 Score=259.32 Aligned_cols=312 Identities=15% Similarity=0.100 Sum_probs=237.2
Q ss_pred eEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCc--chHHHHHHHHHHhCC----CCCcEEEeCCHHHHHHHHHHHhc---C
Q 014492 98 VKIDANENPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGL----ESDHILVGCGADELIDLIMRCVL---D 168 (423)
Q Consensus 98 i~l~~~~~~~~~~~~v~~al~~~~~~~~Y~~~--g~~~lr~~ia~~~g~----~~~~i~~t~G~~~al~~~~~~l~---~ 168 (423)
+.|.. .+.+.++++.+++.+....+++|.. ...+++++++++++. ++++|++|+|+++++..++.+++ +
T Consensus 7 ~~~~p--~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~~~ 84 (385)
T 2bkw_A 7 TLLIP--GPIILSGAVQKALDVPSLGHTSPEFVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILSKA 84 (385)
T ss_dssp EECSS--SSCCCCHHHHHTTSCCCCCTTSHHHHHHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHSCTTC
T ss_pred eeecC--CCcCchHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHhCCCCCCCCceEEEcCchHHHHHHHHHHHhccCC
Confidence 55554 4566789999999874332334432 356788999998864 46899999999999999999987 8
Q ss_pred CCCeEEEc-CCCchhh-HHHHHHCCCeEEEecC-CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHc
Q 014492 169 PGDKIVDC-PPTFTMY-EFDAAVNGAAVVKVPR-KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE 245 (423)
Q Consensus 169 ~gd~Vl~~-~p~y~~~-~~~~~~~g~~~~~v~~-~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~ 245 (423)
+||+|++. .|.|..+ ...++..|++++.+|. +.++.+|++++++++++.++++|++++|+||||.+++.+++.++|+
T Consensus 85 ~gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~~~~ 164 (385)
T 2bkw_A 85 PNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSDLKAISQAIK 164 (385)
T ss_dssp SCCEEEEECSSHHHHHHHHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHH
T ss_pred CCCeEEEEcCCcchHHHHHHHHHcCCceEEEecCCCCCCCCHHHHHHHHhcCCCCEEEEEccCCCcCeEcCHHHHHHHHH
Confidence 99999877 5566655 3667789999999998 7777899999999997447999999999999999999999999998
Q ss_pred C---CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhc-ccCccccccccCHHHHH-HHH--------------
Q 014492 246 M---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG-LAGLRVGYGAFPLSIIE-YLW-------------- 306 (423)
Q Consensus 246 ~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g-~~G~R~G~i~~~~~~~~-~l~-------------- 306 (423)
. |+++|+||+|..... + .. +...+.++++.|+||.++ .+| +||++++++.++ .+.
T Consensus 165 ~~~~~~~li~D~a~~~~~~-~--~~-~~~~~~d~~~~s~~K~~~~~~G--~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 238 (385)
T 2bkw_A 165 QTSPETFFVVDAVCSIGCE-E--FE-FDEWGVDFALTASQKAIGAPAG--LSISLCSSRFMDYALNDSKNGHVHGYFSSL 238 (385)
T ss_dssp HHCTTSEEEEECTTTTTTS-C--CC-TTTTTCSEEEEESSSTTCCCSC--EEEEEECHHHHHHHTCHHHHCCCSCSTTCH
T ss_pred hhCCCCEEEEECccccCCc-c--cc-ccccCceEEEecCccccccCCc--ceEEEEcHHHHHHHHhhccCCCCCceeecH
Confidence 5 899999999974321 1 11 223345688999999654 566 499999988776 431
Q ss_pred --------HhcC-----CCCCcHHHHHHHHHHhCCh-HH-HHHHHHHHHHHHHHHHHHH-ccCCCCeecC------CCce
Q 014492 307 --------RAKQ-----PYNVSVAAEVAACAALQNP-IY-LEKVKEALIKERERLFKLL-KDVPFLNPYP------SYSN 364 (423)
Q Consensus 307 --------~~~~-----~~~~~~~~~~a~~~~l~~~-~~-~~~~~~~~~~~~~~l~~~L-~~~~~~~~~p------~~~~ 364 (423)
.... .++.+..++.++..+++.. ++ +++.+++++++++++.+.| ++++ +.+.+ ..++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g-~~~~~~~~~~~~~~~ 317 (385)
T 2bkw_A 239 RRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGLQ-LTSVSRYPSNMSAHG 317 (385)
T ss_dssp HHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTTC-CEESSCSSSTTBCSS
T ss_pred HHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhcC-ceecccCcccccCCc
Confidence 1111 2467777777777777642 23 6778889999999999999 8884 55442 2478
Q ss_pred EEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC-CCCCeEEEE-ec------ChhhHHHHHHHHhh
Q 014492 365 FILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK-ELKGYVRVS-VG------KPEHTDALMECLMH 421 (423)
Q Consensus 365 ~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~-~~~~~iRis-~~------~~~~~~~l~~al~~ 421 (423)
++++.+++ ..++.+.|.++||.++++..+ ...+++||+ ++ +.++++++.++|++
T Consensus 318 ~~~~~~~~---~~~~~~~l~~~gi~v~~g~~~~~~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~ 379 (385)
T 2bkw_A 318 LTAVYVAD---PPDVIAFLKSHGVVIAGGIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDLIKL 379 (385)
T ss_dssp CEEEECSC---HHHHHHHHHHTTEECBCCCCTTTGGGEEEECCCGGGTSSTTCTHHHHHHHHHHH
T ss_pred eEEEecCC---HHHHHHHHHHCCeEEeCCCCcccCCCEEEEEccccccccCCHHHHHHHHHHHHH
Confidence 89999873 788999999999999987652 346799999 65 56667777777664
No 123
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=100.00 E-value=2.7e-33 Score=274.97 Aligned_cols=316 Identities=16% Similarity=0.060 Sum_probs=225.8
Q ss_pred CCCeeEcCCCCCCCCCCHHHHHHHhcC-C----CCC-CCC-----CcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492 94 PEDIVKIDANENPYGPPPEVREALGQL-K----FPY-IYP-----DPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (423)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~----~~~-~Y~-----~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~ 162 (423)
..+.++|+.+.+. ++++++.+++.+. . ... .|. .....++++++++++|+++++|++|+|+++++.++
T Consensus 18 ~~~~iyld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~g~t~al~~~ 96 (400)
T 3vax_A 18 GSHMTYLDAAATT-RVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTVSAEPDELIFTSGATESNNIA 96 (400)
T ss_dssp ----CCCCCCCCS-SSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEESCHHHHHHHH
T ss_pred cCCcEEecCCCCC-CCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeCCHHHHHHHH
Confidence 3556888887765 6678888888762 1 111 111 12256899999999999889999999999999999
Q ss_pred HHHhc----CCCC-eEEEcCCCchhhHHHHHH---CCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcC
Q 014492 163 MRCVL----DPGD-KIVDCPPTFTMYEFDAAV---NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI 234 (423)
Q Consensus 163 ~~~l~----~~gd-~Vl~~~p~y~~~~~~~~~---~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~ 234 (423)
+++++ ++|| .|+++.++|+.+...+.. .|++++.+|.+.++.+|++++++++. +++++|++++|+||||.+
T Consensus 97 ~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~v~~~~~~nptG~~ 175 (400)
T 3vax_A 97 LLGLAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGPSGRISVEGVMERLR-PDTLLVSLMHVNNETGVI 175 (400)
T ss_dssp HHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCCTTCCCCHHHHHTTCC-TTEEEEECCSBCTTTCBB
T ss_pred HHHHHHhhccCCCCEEEECccccHhHHHHHHHHHhcCCeEEEEccCCCCCcCHHHHHHhcC-CCceEEEEECCCCCceee
Confidence 99887 8999 999999999877655544 69999999988888899999999997 689999999999999999
Q ss_pred CCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccc-cCH-HHH---HHHHH-
Q 014492 235 INDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA-FPL-SII---EYLWR- 307 (423)
Q Consensus 235 ~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~-~~~-~~~---~~l~~- 307 (423)
++.++|.++|+. |+++|+||+|..... .. .+... ..+++.|+||.+|.+| +|+++ +++ ++. ..+..
T Consensus 176 ~~l~~i~~la~~~~~~li~D~a~~~~~~---~~-~~~~~-~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~ 248 (400)
T 3vax_A 176 QPVAELAQQLRATPTYLHVDAAQGYGKV---PG-DLTTP-IDMISISGHKIGAPKG--VGALVTRRREEMDDERVPLEPI 248 (400)
T ss_dssp CCHHHHHHHHTTSSCEEEEECTTTTTTS---GG-GGGSC-CSEEEEETGGGTSCSS--CEEEEECBCSSSTTCBCCCCCS
T ss_pred CcHHHHHHHHHhcCCEEEEEhhhhcCCC---Cc-Chhhc-CcEEEEeHHHhCCCCc--eEEEEEecchhccccccccCce
Confidence 999999999998 999999999984332 11 12222 4588999999777656 56666 544 111 11111
Q ss_pred --------hcCCCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCC----ceEEEEEeCCCC
Q 014492 308 --------AKQPYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSY----SNFILCEVTSGM 374 (423)
Q Consensus 308 --------~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~----~~~~~~~~~~~~ 374 (423)
....++.+...+.++..+++. .+++++.+++++++++++.+.|+ .+++.+.+.. ++++++.++ +.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~~~~~~~~~~~~~~~~~~-~~ 326 (400)
T 3vax_A 249 MFGGGQERKLRPGTLPVPLIMGLAEAAKIFEAEHAQWQVAAQDLRSRLLAGLA-STSFQVNGDQDHVVPHILNLSFE-DV 326 (400)
T ss_dssp SCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHT-TTTCEECSCTTSBCTTEEEEECT-TC
T ss_pred ecCCCceeeeecCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhC-CCCEEEeCCcccCCCCEEEEEeC-CC
Confidence 112345677777777676654 34578899999999999999998 7666654333 367888887 57
Q ss_pred CHHHHHHHHHhCCcEEEeCCCC--------------CC-----CCeEEEEe-c---ChhhHHHHHHHHhh
Q 014492 375 DAKKLKDDLAKMGVMIRHYNNK--------------EL-----KGYVRVSV-G---KPEHTDALMECLMH 421 (423)
Q Consensus 375 ~~~~l~~~L~~~gI~v~~~~~~--------------~~-----~~~iRis~-~---~~~~~~~l~~al~~ 421 (423)
+.+++.+.|. +||.++++..+ +. ++++||++ + +.++++++.++|++
T Consensus 327 ~~~~l~~~L~-~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~ 395 (400)
T 3vax_A 327 DAEAFLVTLK-DLVAVATGSASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVAK 395 (400)
T ss_dssp CHHHHHHHHH-HHHHHTTTTEEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC----------------
T ss_pred CHHHHHHHHh-cCcEEEecccccCCCCCccHHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHHH
Confidence 8899999999 99998876421 11 48999999 6 34455556655554
No 124
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=100.00 E-value=2.7e-32 Score=270.90 Aligned_cols=316 Identities=19% Similarity=0.117 Sum_probs=220.0
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCcc----------hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPE----------SRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~g----------~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~ 163 (423)
.+.++|+.+.+. ++++.+++++.+. ....+||... ..++|+++++++|+++++|++|+|+++++..++
T Consensus 17 ~~~~~Ld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~ 95 (432)
T 3a9z_A 17 NRKVYMDYNATT-PLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKPQDIIFTSGGTESNNLVI 95 (432)
T ss_dssp -CCEECBTTTCC-CCCHHHHHHHHHHHHHCCSCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHH
T ss_pred CCcEEeeCCccC-CCCHHHHHHHHHHHHHhcCCCccCcHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEeCChHHHHHHHH
Confidence 456899998887 6789999888762 2223444322 358999999999998899999999999999999
Q ss_pred HHhc--------CCCCeEEEcCCCchhh-----------------HHHHHHCCCeEEEecCCC-CCCCCHHHHHHHhhcC
Q 014492 164 RCVL--------DPGDKIVDCPPTFTMY-----------------EFDAAVNGAAVVKVPRKS-DFSLNVELIADAVERE 217 (423)
Q Consensus 164 ~~l~--------~~gd~Vl~~~p~y~~~-----------------~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~ 217 (423)
.+++ ++||+|+++.|+|..+ ...++..|++++.+|.+. ++.+|++++++++. .
T Consensus 96 ~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~i~-~ 174 (432)
T 3a9z_A 96 HSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVR-P 174 (432)
T ss_dssp HHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTTTSSCCHHHHHHTCC-T
T ss_pred HHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcccCCcCHHHHHHhcc-C
Confidence 9886 5899999999999765 344556799999999764 66799999999997 6
Q ss_pred CceEEEEcCCCCCcCcCCCHHHHHHHHcC-C----------CEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhc
Q 014492 218 KPKCIFLTSPNNPDGSIINDEDLLKILEM-P----------ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG 286 (423)
Q Consensus 218 ~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~----------~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 286 (423)
++++|++++|+||||.+++.+++.++|+. + +++|+||+|..+..... ... ... .+++.|+||.+
T Consensus 175 ~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~~~~-~~~--~~~-d~~~~s~~K~~- 249 (432)
T 3a9z_A 175 TTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVD-VED--LGV-DFLTIVGHKFY- 249 (432)
T ss_dssp TEEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTSCCC-HHH--HCC-SEEEEEGGGTT-
T ss_pred CceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEEEchhhhCCcccC-hhh--cCC-CEEEEehhHhc-
Confidence 89999999999999999999999999987 7 99999999986532111 111 122 26689999966
Q ss_pred ccCccccccccCHHH-HHHHH---------HhcCCCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCC
Q 014492 287 LAGLRVGYGAFPLSI-IEYLW---------RAKQPYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPF 355 (423)
Q Consensus 287 ~~G~R~G~i~~~~~~-~~~l~---------~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~ 355 (423)
|.|+||++++++. ...+. +....++.+..++.++.++++. .+++++.+++++++++++.+.|+++.+
T Consensus 250 --g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 327 (432)
T 3a9z_A 250 --GPRIGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVSENCETYEAHMRDIRDYLEERLEAEFG 327 (432)
T ss_dssp --CCSCEEEEETTBTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHG
T ss_pred --CCcceEEEEccccccCCcCceeecCCccccccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccC
Confidence 4569999998765 22222 1123356788888777777764 456788899999999999999987532
Q ss_pred Cee---cC-----CCceEEEEEeCC-CCCHHHHHHHHHhCCcEEEeCCC---------------CCC-----CCeEEEEe
Q 014492 356 LNP---YP-----SYSNFILCEVTS-GMDAKKLKDDLAKMGVMIRHYNN---------------KEL-----KGYVRVSV 406 (423)
Q Consensus 356 ~~~---~p-----~~~~~~~~~~~~-~~~~~~l~~~L~~~gI~v~~~~~---------------~~~-----~~~iRis~ 406 (423)
..+ .+ ..+..+++.+++ +.+..++.+.+ .++.++.+.. .+. .+++||++
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~~~G~~~~~~~~~~~~~~l~~~g~~~~~~~~~iRis~ 405 (432)
T 3a9z_A 328 KRIHLNSRFPGVERLPNTCNFSIQGSQLRGYMVLAQC--QTLLASVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSV 405 (432)
T ss_dssp GGEEESSCCTTCCBCTTEEEEEECSTTCCHHHHHHHC--SSEECBSSCGGGGGGTTSCCHHHHHTTCCHHHHTTEEEEEC
T ss_pred CcEEEeCCCCcccCCCCEEEEEeCCCCCcHHHHHHHh--cCeEEeccccccCCCCCCccHHHHhcCCCccccCceEEEEc
Confidence 222 12 123456666764 34566676655 3666665422 111 37999999
Q ss_pred c---ChhhHHHHHHHHhh
Q 014492 407 G---KPEHTDALMECLMH 421 (423)
Q Consensus 407 ~---~~~~~~~l~~al~~ 421 (423)
+ +.++++++.++|++
T Consensus 406 ~~~~t~eei~~~~~~l~~ 423 (432)
T 3a9z_A 406 GRSTTRAEVDLIVQDLKQ 423 (432)
T ss_dssp CTTCCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHH
Confidence 8 56677777776654
No 125
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=4.6e-32 Score=262.21 Aligned_cols=310 Identities=13% Similarity=0.056 Sum_probs=235.9
Q ss_pred eeEcCCCCCCCCCCHHHHHHHhc----CC--CCCCCCCc--chHHHHHHHHHHhCCC-CCcEEEeCCHHHHHHHHHHHhc
Q 014492 97 IVKIDANENPYGPPPEVREALGQ----LK--FPYIYPDP--ESRRLRAALAKDSGLE-SDHILVGCGADELIDLIMRCVL 167 (423)
Q Consensus 97 ~i~l~~~~~~~~~~~~v~~al~~----~~--~~~~Y~~~--g~~~lr~~ia~~~g~~-~~~i~~t~G~~~al~~~~~~l~ 167 (423)
.+.|.. .+.+.++++.+++.+ -. ..+.|+.. ...++++.+++++|.+ +++|++|+|+++++.+++.+++
T Consensus 5 ~~~~~p--~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~al~~~~~~l~ 82 (362)
T 3ffr_A 5 KIYFTP--GPSELYPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLLELPSNYEVLFLASATEIWERIIQNCV 82 (362)
T ss_dssp CEEECS--SSCCCCTTHHHHHHHHHHTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTEEEEEESCHHHHHHHHHHHHC
T ss_pred ceeccC--CCcCCCHHHHHHHHHHhcCCccCcCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCchHHHHHHHHhcc
Confidence 355544 455566777755543 11 12233332 2467899999999884 6789999999999999999999
Q ss_pred CCCCeEEEcCCCch-hhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC
Q 014492 168 DPGDKIVDCPPTFT-MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM 246 (423)
Q Consensus 168 ~~gd~Vl~~~p~y~-~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~ 246 (423)
++ +.+++..+.|. .+...++..|++++.++.++++.+|+++++ +. +++++|++++|+||||.+++.+++.++|+.
T Consensus 83 ~~-~~i~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~--~~-~~~~~v~~~~~~nptG~~~~l~~i~~la~~ 158 (362)
T 3ffr_A 83 EK-KSFHCVNGSFSKRFYEFAGELGREAYKEEAAFGKGFYPADIT--VP-ADAEIICLTHNETSSGVSMPVEDINTFRDK 158 (362)
T ss_dssp SS-EEEEEECSHHHHHHHHHHHHTTCEEEEEECCTTCCCCGGGCC--CC-TTCCEEEEESEETTTTEECCHHHHTTSGGG
T ss_pred CC-cEEEEcCcHHHHHHHHHHHHhCCCeEEEecCCCCCCCHHHHh--cc-CCccEEEEEcCCCCcceeCCHHHHHHHHHh
Confidence 88 55666666666 334566778999999998878899999998 54 789999999999999999999999999974
Q ss_pred --CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhc-ccCccccccccCHHHHHHHHHhcC-------------
Q 014492 247 --PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG-LAGLRVGYGAFPLSIIEYLWRAKQ------------- 310 (423)
Q Consensus 247 --~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g-~~G~R~G~i~~~~~~~~~l~~~~~------------- 310 (423)
|+++|+|++|..+..... . ....+++.|+||.++ ++| +|++++++++++++.....
T Consensus 159 ~p~~~li~D~a~~~~~~~~~-~-----~~~d~~~~s~~K~~~~~~G--~g~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~ 230 (362)
T 3ffr_A 159 NKDALIFVDAVSSLPYPKFD-W-----TKIDSVFFSVQKCFGLPAG--LGVWILNDRVIEKSKALLAKRKSIGTYHTIPS 230 (362)
T ss_dssp STTSEEEEECTTTTTSSCCC-T-----TSCSEEEEETTSTTCCCSC--CEEEEEEHHHHHHHHHHHHTTCCCCSTTSHHH
T ss_pred CCCCEEEEecccccCCcccC-h-----hHCcEEEEecccccCCCCc--eEEEEECHHHHHHhhhccccCCCCcccccHHH
Confidence 899999999986542211 1 113488999999998 677 5778889998887776542
Q ss_pred ----------CCCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeecC-----CCceEEEEEeCCC
Q 014492 311 ----------PYNVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPYP-----SYSNFILCEVTSG 373 (423)
Q Consensus 311 ----------~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p-----~~~~~~~~~~~~~ 373 (423)
.++.+..++.++..+++. ...+++.+++++++++++.+.|++++++.+.+ ..+.++++.+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~- 309 (362)
T 3ffr_A 231 MLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYIESSKVFSFGVEDAKLRSMTTIVANTTM- 309 (362)
T ss_dssp HHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCSSEEESSSCGGGBCSSEEEEEESS-
T ss_pred HHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccCceeccCChhhcCCceEEEecCC-
Confidence 456777777777777753 22267888999999999999999986666544 235678888875
Q ss_pred CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492 374 MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL 422 (423)
Q Consensus 374 ~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l 422 (423)
+..++.+.|.++||.++++..+..++++||+++ +.++++++.++|+++
T Consensus 310 -~~~~~~~~l~~~gi~~~~g~~~~~~~~iRis~~~~~~~e~i~~l~~~l~~~ 360 (362)
T 3ffr_A 310 -LPGEINKILEPFDMAVGAGYGSKKETQIRIANFPAHSLEQVHKLVQTLKEK 360 (362)
T ss_dssp -CHHHHHHHHGGGTEEEEECSGGGTTTEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHCCeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 889999999988999998765556789999987 566777777777764
No 126
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=100.00 E-value=3.1e-32 Score=267.50 Aligned_cols=311 Identities=14% Similarity=0.130 Sum_probs=230.4
Q ss_pred CCCCeeEcCCC--CCCCC-CCHHHHHHHhcC-C---C-CCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHH
Q 014492 93 KPEDIVKIDAN--ENPYG-PPPEVREALGQL-K---F-PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (423)
Q Consensus 93 ~~~~~i~l~~~--~~~~~-~~~~v~~al~~~-~---~-~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~ 164 (423)
.+..++|++.+ .++++ ++|++.+++.+. . . ...|+.+...++++.+++++| +++|++++|+++++..+++
T Consensus 38 ~g~~~ld~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g--~~~v~~~~gg~~a~~~al~ 115 (397)
T 2ord_A 38 KGNAYLDFTSGIAVNVLGHSHPRLVEAIKDQAEKLIHCSNLFWNRPQMELAELLSKNTF--GGKVFFANTGTEANEAAIK 115 (397)
T ss_dssp TCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCSCCCTTSEEHHHHHHHHHHHHTTT--SCEEEEESSHHHHHHHHHH
T ss_pred CCCEEEECCccccccccCCCCHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHhcC--CCeEEEeCCHHHHHHHHHH
Confidence 45678899876 35555 478888888762 1 1 123554557889999999998 5799999999999999999
Q ss_pred HhcC------C-CCeEEEcCCCchh-hHHHHHHCCCe------------EEEecCCCCCCCCHHHHHHHhhcCCceEEEE
Q 014492 165 CVLD------P-GDKIVDCPPTFTM-YEFDAAVNGAA------------VVKVPRKSDFSLNVELIADAVEREKPKCIFL 224 (423)
Q Consensus 165 ~l~~------~-gd~Vl~~~p~y~~-~~~~~~~~g~~------------~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l 224 (423)
.+.. + ++.|++.+|+|+. +...++..|.+ ++.+|. .|++++++.++ +++++|++
T Consensus 116 ~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-----~d~~~l~~~l~-~~~~~v~~ 189 (397)
T 2ord_A 116 IARKYGKKKSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEF-----NNVEDLRRKMS-EDVCAVFL 189 (397)
T ss_dssp HHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECT-----TCHHHHHHHCC-TTEEEEEE
T ss_pred HHHHHhhcCCCCCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecC-----CCHHHHHHHhh-cCeEEEEE
Confidence 8763 5 4789999999964 44466777776 777774 28999999997 68999999
Q ss_pred cCCCCCcCc-CCCHHHHHHHHcC----CCEEEEccCCccccCCCch--hhhhccCCcEEEEccChhhhcccCcccccccc
Q 014492 225 TSPNNPDGS-IINDEDLLKILEM----PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF 297 (423)
Q Consensus 225 ~~p~NPtG~-~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~ 297 (423)
++|+||||. +++.+++++|++. |+++|+||+|.++.+.+.. ....+...+++ ||||.++ +|+|+||+++
T Consensus 190 ~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~---s~sK~~~-~G~r~G~~~~ 265 (397)
T 2ord_A 190 EPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKLFAYQKYGVVPDVL---TTAKGLG-GGVPIGAVIV 265 (397)
T ss_dssp CSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE---EECGGGG-TTSCCEEEEE
T ss_pred ecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccchhhhhhCCCCCee---eeccccC-CCcCeEEEEE
Confidence 999999999 8888888877664 9999999999977643322 22233223333 7899999 8999999999
Q ss_pred CHHHHHHHHH--hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccC----CCCeecCCCceEEEEEeC
Q 014492 298 PLSIIEYLWR--AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDV----PFLNPYPSYSNFILCEVT 371 (423)
Q Consensus 298 ~~~~~~~l~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~p~~~~~~~~~~~ 371 (423)
+++++ .+.. ....++.+++++.++.++|+..+. ++.+++++++++++.+.|+++ +.+...++.++|++++++
T Consensus 266 ~~~~~-~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~ 343 (397)
T 2ord_A 266 NERAN-VLEPGDHGTTFGGNPLACRAGVTVIKELTK-EGFLEEVEEKGNYLMKKLQEMKEEYDVVADVRGMGLMIGIQFR 343 (397)
T ss_dssp CSTTC-CCCTTSSCCSSTTCHHHHHHHHHHHHHHTS-TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEC
T ss_pred chHhc-ccCCCCcCCCCCCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHhCCceEEEEEEeEEEEEEEC
Confidence 88876 5542 223467889999888888864222 456778888888888888764 322223456789999998
Q ss_pred CCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 372 SGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 372 ~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
+..+..++.+.|.++||.+++++ ++++||+++ +.++++++.++|++
T Consensus 344 ~~~~~~~l~~~l~~~gi~v~~~~----~~~iRis~~~~~~~e~i~~~~~~l~~ 392 (397)
T 2ord_A 344 EEVSNREVATKCFENKLLVVPAG----NNTIRFLPPLTVEYGEIDLAVETLKK 392 (397)
T ss_dssp TTSCHHHHHHHHHHTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHCCCEEccCC----CCEEEEECCcCCCHHHHHHHHHHHHH
Confidence 65678999999999999999874 679999954 45555555555543
No 127
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=100.00 E-value=5.3e-31 Score=254.32 Aligned_cols=311 Identities=16% Similarity=0.141 Sum_probs=228.9
Q ss_pred CCCeeEcCCCCCCCCCCHHHHHHHhcCCC--CCCCC-CcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCC
Q 014492 94 PEDIVKIDANENPYGPPPEVREALGQLKF--PYIYP-DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPG 170 (423)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~~~~--~~~Y~-~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~g 170 (423)
.+++|||+.+ ++.+++|++.+++.+... ...|+ ++...++++.+++++| .+++|++|+|+++++..++..++++|
T Consensus 6 ~~~~id~~~~-~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~la~~~g-~~~~v~~~~~gt~a~~~al~~~~~~g 83 (356)
T 1v72_A 6 RPPALGFSSD-NIAGASPEVAQALVKHSSGQAGPYGTDELTAQVKRKFCEIFE-RDVEVFLVPTGTAANALCLSAMTPPW 83 (356)
T ss_dssp CCCCCBCSCG-GGCCCCHHHHHHHHHTTSSCCCSTTCSHHHHHHHHHHHHHHT-SCCEEEEESCHHHHHHHHHHTSCCTT
T ss_pred CCceEeeccC-CccCCCHHHHHHHHhhccCcccccccchHHHHHHHHHHHHhC-CCCcEEEeCCccHHHHHHHHHhcCCC
Confidence 3567999986 456778999999987432 34564 3456789999999999 55569999999999999999999999
Q ss_pred CeEEEcCCCchhhHHH--HHHC--CCeEEEecCCCCCCCCHHHHHH-HhhcC------CceEEEEcCCCCCcCcCCCHHH
Q 014492 171 DKIVDCPPTFTMYEFD--AAVN--GAAVVKVPRKSDFSLNVELIAD-AVERE------KPKCIFLTSPNNPDGSIINDED 239 (423)
Q Consensus 171 d~Vl~~~p~y~~~~~~--~~~~--g~~~~~v~~~~~~~~d~~~l~~-~i~~~------~~~~i~l~~p~NPtG~~~~~~~ 239 (423)
|.|+++.|+|..+... ++.. |++++.+|.+ ++.+|++++++ .+.+. ++++|++++|+| ||.+++.++
T Consensus 84 d~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-tG~~~~~~~ 161 (356)
T 1v72_A 84 GNIYCHPASHINNDECGAPEFFSNGAKLMTVDGP-AAKLDIVRLRERTREKVGDVHTTQPACVSITQATE-VGSIYTLDE 161 (356)
T ss_dssp EEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCG-GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCT-TSCCCCHHH
T ss_pred CEEEEcCccchhhhhchHHHHHhCCcEEEEecCC-CCeEcHHHHHHHhhhcchhhccCCceEEEEEcCCC-CCccCCHHH
Confidence 9999999999765443 5555 9999999975 46899999999 88641 689999999987 999999888
Q ss_pred HHHHHcC----CCEEEEccCCccccC--CCchhhhh--ccCCcEEEEccChhhhcccCcccc--ccccCHHHHHHHHHhc
Q 014492 240 LLKILEM----PILVVLDEAYTEFSG--LESRMEWV--KKHDNLIVLRTFSKRAGLAGLRVG--YGAFPLSIIEYLWRAK 309 (423)
Q Consensus 240 l~~i~~~----~~~li~Deay~~~~~--~~~~~~~~--~~~~~~i~i~S~SK~~g~~G~R~G--~i~~~~~~~~~l~~~~ 309 (423)
+++|++. |+++|+|++|..+.. .+...... ..... +++.|+||. | .|+| |+++++++++++....
T Consensus 162 l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~d-~~~~s~sK~-g---~~~G~g~~~~~~~~~~~~~~~~ 236 (356)
T 1v72_A 162 IEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVD-ALSFGATKN-G---VLAAEAIVLFNTSLATEMSYRR 236 (356)
T ss_dssp HHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCC-EEEECCGGG-T---CSSCEEEEESSGGGHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhhhhhcCC-EEEEecccC-C---CcCccEEEEECHHHHhhHHHHh
Confidence 8877664 999999999975421 11111111 11222 445689996 3 3556 8888988887765442
Q ss_pred C---C-CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCCCCCHHHHHHHHH
Q 014492 310 Q---P-YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTSGMDAKKLKDDLA 384 (423)
Q Consensus 310 ~---~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~~~~~~~l~~~L~ 384 (423)
. . ...+..++.++...+++ +.+.+..++++++++++.+.|++++++.+ .|..++|+|++++ .++.+.|.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~-----~~~~~~l~ 310 (356)
T 1v72_A 237 KRAGHLSSKMRFLSAQIDAYLTD-DLWLRNARKANAAAQRLAQGLEGLGGVEVLGGTEANILFCRLD-----SAMIDALL 310 (356)
T ss_dssp HHTTCCCSSTHHHHHHHHHHTST-THHHHHHHHHHHHHHHHHHHHTTCTTEEEESCCCSSEEEEEEC-----HHHHHHHH
T ss_pred hccCchhhhHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHhhCCCcEEccCCCccEEEEEcC-----HHHHHHHH
Confidence 1 1 12233444445566665 33455677788999999999988755554 5788899999986 37899999
Q ss_pred hCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 385 KMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 385 ~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
++||.++++. ++ ++++||+++ +.++++++.++|++
T Consensus 311 ~~gi~v~~g~-~~-~~~iRi~~~~~~~~~~i~~~~~~l~~ 348 (356)
T 1v72_A 311 KAGFGFYHDR-WG-PNVVRFVTSFATTAEDVDHLLNQVRL 348 (356)
T ss_dssp HTTCBCBCSS-SS-TTEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred hcCeEEeccc-cC-CCeEEEEecCCCCHHHHHHHHHHHHH
Confidence 9999999866 33 789999986 45566666666654
No 128
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=100.00 E-value=2.2e-31 Score=261.97 Aligned_cols=311 Identities=16% Similarity=0.215 Sum_probs=230.2
Q ss_pred CCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-CCC----CCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492 92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (423)
Q Consensus 92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~----~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~ 163 (423)
..+++++|+..+ .++++ .+|++.+++.+ +.. ...|+++...++++.++++++. ++|++|+|+++++..++
T Consensus 36 ~~g~~~lD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~--~~v~~~~gg~~a~~~al 113 (406)
T 4adb_A 36 QQGKEYIDFAGGIAVNALGHAHPELREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFA--DRVFFCNSGAEANEAAL 113 (406)
T ss_dssp TTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSCCCTTSCCHHHHHHHHHHHHHSSC--SEEEEESSHHHHHHHHH
T ss_pred CCCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhcccccCCcCCHHHHHHHHHHHhhCCC--CeEEEeCcHHHHHHHHH
Confidence 456778999877 34454 47888888876 221 1345666678999999999985 49999999999999999
Q ss_pred HHhcC-------CC-CeEEEcCCCchhhHHHHHHCCC-------------eEEEecCCCCCCCCHHHHHHHhhcCCceEE
Q 014492 164 RCVLD-------PG-DKIVDCPPTFTMYEFDAAVNGA-------------AVVKVPRKSDFSLNVELIADAVEREKPKCI 222 (423)
Q Consensus 164 ~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i 222 (423)
+.++. +| |.|++.+|+|+.+...+...+. .+..+|. .|++++++.+. .++++|
T Consensus 114 ~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~-~~~~~v 187 (406)
T 4adb_A 114 KLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAY-----NDINSASALID-DSTCAV 187 (406)
T ss_dssp HHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECT-----TCHHHHHTTCS-TTEEEE
T ss_pred HHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCC-----CcHHHHHHHhc-CCeEEE
Confidence 98765 66 9999999999877655544443 3444442 47999999997 789999
Q ss_pred EEcCCCCCcCcCC--CHHHHHHHHcC----CCEEEEccCCccccCCCch--hhhhccCCcEEEEccChhhhcccCccccc
Q 014492 223 FLTSPNNPDGSII--NDEDLLKILEM----PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGY 294 (423)
Q Consensus 223 ~l~~p~NPtG~~~--~~~~l~~i~~~----~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~g~~G~R~G~ 294 (423)
+++ |+||||.++ +.+++++|++. |++||+||+|.+|...+.. ....+...+++ ||||.++ +|+|+||
T Consensus 188 ~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~---t~sK~~~-~G~r~G~ 262 (406)
T 4adb_A 188 IVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDLL---TTAKALG-GGFPVGA 262 (406)
T ss_dssp EEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE---EECGGGG-TTSCCEE
T ss_pred EEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhHHHHhcCCCCCEE---Eechhhc-CCCCeEE
Confidence 988 999999988 77777666553 9999999999977654332 22333344444 6799999 9999999
Q ss_pred cccCHHHHHHHHHhc--CCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC----CCeecCCCceEEEE
Q 014492 295 GAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP----FLNPYPSYSNFILC 368 (423)
Q Consensus 295 i~~~~~~~~~l~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~----~~~~~p~~~~~~~~ 368 (423)
+++++++++.+.... ..++.+++++.++.++|+..+. ++..++++++++++.+.|+++. .....++.++++++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~ 341 (406)
T 4adb_A 263 LLATEECARVMTVGTHGTTYGGNPLASAVAGKVLELINT-PEMLNGVKQRHDWFVERLNTINHRYGLFSEVRGLGLLIGC 341 (406)
T ss_dssp EEECHHHHHTCCTTSSCCSSTTCHHHHHHHHHHHHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEEE
T ss_pred EEEcHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEEEEEEEE
Confidence 999999988876554 3467899999999888864221 5677778888888888887642 22223456889999
Q ss_pred EeCCCC--CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014492 369 EVTSGM--DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM 420 (423)
Q Consensus 369 ~~~~~~--~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~ 420 (423)
.+++.. +..++.+.|.++||.+++++ ++++||+++ +.++++++.++|+
T Consensus 342 ~~~~~~~~~~~~~~~~l~~~gi~v~~~~----~~~iRi~~~~~~~~e~i~~~~~~l~ 394 (406)
T 4adb_A 342 VLNADYAGQAKQISQEAAKAGVMVLIAG----GNVVRFAPALNVSEEEVTTGLDRFA 394 (406)
T ss_dssp EECTTTTTCHHHHHHHHHHTTEECEESS----TTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred EEeCCcHHHHHHHHHHHHHCCcEEeecC----CCeEEEECCCCCCHHHHHHHHHHHH
Confidence 997543 68899999999999999875 689999654 3444444444443
No 129
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.98 E-value=3.7e-31 Score=259.68 Aligned_cols=316 Identities=16% Similarity=0.149 Sum_probs=228.6
Q ss_pred CCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-CCC-CC---CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492 92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKF-PY---IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (423)
Q Consensus 92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~-~~---~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~ 163 (423)
..+++++||..| .++++ .+|++.+++.+ +.. .+ .|+++...++++++++++| +++|++++|+++++..++
T Consensus 33 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~--~~~v~~~~gg~ea~~~al 110 (395)
T 3nx3_A 33 DKAKKYLDFSSGIGVCALGYNHAKFNAKIKAQVDKLLHTSNLYYNENIAAAAKNLAKASA--LERVFFTNSGTESIEGAM 110 (395)
T ss_dssp TTCCEEEESSHHHHTCTTCBSCHHHHHHHHHHHTTCSCCCTTSBCHHHHHHHHHHHHHHT--CSEEEEESSHHHHHHHHH
T ss_pred CCCCEEEECCCcHHhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhcC--CCeEEEeCCHHHHHHHHH
Confidence 456789999988 67776 47899988876 222 12 2455557789999999998 589999999999999999
Q ss_pred HHhc-------CCCCeEEEcCCCchhhHHHHHHCC-------------CeEEEecCCCCCCCCHHHHHHHhhcCCceEEE
Q 014492 164 RCVL-------DPGDKIVDCPPTFTMYEFDAAVNG-------------AAVVKVPRKSDFSLNVELIADAVEREKPKCIF 223 (423)
Q Consensus 164 ~~l~-------~~gd~Vl~~~p~y~~~~~~~~~~g-------------~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~ 223 (423)
+.+. .+++.|++.+|+|+.+...+...+ ..+..+|. .|++++++.++ +++++|+
T Consensus 111 ~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~-~~~~~v~ 184 (395)
T 3nx3_A 111 KTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKY-----NDISSVEKLVN-EKTCAII 184 (395)
T ss_dssp HHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECT-----TCHHHHHTTCC-TTEEEEE
T ss_pred HHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCC-----CCHHHHHHhcc-CCeEEEE
Confidence 8765 357999999999986654443322 34555552 27999999997 6889999
Q ss_pred EcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccC
Q 014492 224 LTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP 298 (423)
Q Consensus 224 l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~ 298 (423)
+++++|++|.+.+ .+++.++|+. |+++|+||+|.+|...+.... ....+....+.|+||.++ +|+|+||++++
T Consensus 185 ~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~-~~~~~~~~d~~t~sK~~~-~G~~~G~~~~~ 262 (395)
T 3nx3_A 185 LESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFFA-YEHAQILPDIMTSAKALG-CGLSVGAFVIN 262 (395)
T ss_dssp EESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSG-GGGGTCCCSEEEECGGGT-TTSCCEEEEEC
T ss_pred EeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcchh-HHhcCCCCCEEEeccccc-CCCceEEEEEc
Confidence 8888888898765 5555566665 999999999998764332111 111121222447899998 59999999999
Q ss_pred HHH-HHHHHHhc--CCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCC
Q 014492 299 LSI-IEYLWRAK--QPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS 372 (423)
Q Consensus 299 ~~~-~~~l~~~~--~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~ 372 (423)
+++ ++.+.... ..++.+++++.++.++|+. +++.++.++..+..++.+.+.+.+++.+...++.++|+++.+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~ 342 (395)
T 3nx3_A 263 QKVASNSLEAGDHGSTYGGNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELINEFDFCKKRKGLGFMQGLSLDK 342 (395)
T ss_dssp HHHHHHHSCTTCCSSCBSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEECT
T ss_pred hhhhhhhcCCcccCCCCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeEEEEEEEEeCC
Confidence 998 77775543 3477899999999888863 34455555555555556655555566555556778999999986
Q ss_pred CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 373 GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 373 ~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
..+..++.+.|.++||.+++++ ++++||+++ +.++++++.++|++
T Consensus 343 ~~~~~~~~~~l~~~Gi~v~~~~----~~~iRi~~~~~~t~e~i~~~l~~l~~ 390 (395)
T 3nx3_A 343 SVKVAKVIQKCQENALLLISCG----ENDLRFLPPLILQKEHIDEMSEKLRK 390 (395)
T ss_dssp TSCHHHHHHHHHHTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHCCCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 6678999999999999999875 689999854 44555555555543
No 130
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.98 E-value=2.1e-31 Score=264.72 Aligned_cols=324 Identities=16% Similarity=0.123 Sum_probs=221.1
Q ss_pred CCCCCeeEcCCCCC--CCCC-CHHHHHHHhcC-C----CCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492 92 RKPEDIVKIDANEN--PYGP-PPEVREALGQL-K----FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (423)
Q Consensus 92 ~~~~~~i~l~~~~~--~~~~-~~~v~~al~~~-~----~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~ 163 (423)
..++.++|+..+.+ +++. +|++.+++.+. . ...+|+.....++++.++++++.++++|++|+|+++++..++
T Consensus 40 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~a~ 119 (433)
T 1zod_A 40 ADGRAILDFTSGQMSAVLGHCHPEIVSVIGEYAGKLDHLFSEMLSRPVVDLATRLANITPPGLDRALLLSTGAESNEAAI 119 (433)
T ss_dssp TTCCEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCCCCCTTCCCHHHHHHHHHHHHHSCTTCCEEEEESCHHHHHHHHH
T ss_pred CCCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCcccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHH
Confidence 34567889876643 5553 78898888652 1 123566555678999999999988899999999999999999
Q ss_pred HHhc--CCCCeEEEcCCCchhhHHHHHHC--------------CCeEEEecCC--CCCC--------CCHHHHHHHhhc-
Q 014492 164 RCVL--DPGDKIVDCPPTFTMYEFDAAVN--------------GAAVVKVPRK--SDFS--------LNVELIADAVER- 216 (423)
Q Consensus 164 ~~l~--~~gd~Vl~~~p~y~~~~~~~~~~--------------g~~~~~v~~~--~~~~--------~d~~~l~~~i~~- 216 (423)
+.+. ..++.|++.+|+|+.+...+... |+..+.+|.. ..++ +|++++++.+++
T Consensus 120 ~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~ 199 (433)
T 1zod_A 120 RMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQ 199 (433)
T ss_dssp HHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHH
T ss_pred HHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhc
Confidence 8653 23578999999997655433321 3344433321 1122 369999999864
Q ss_pred --CCceEEEEcCCCCCcCcCC-C---HHHHHHHHcC-CCEEEEccCCccccCCCc--hhhhhccCCcEEEEccChhhhcc
Q 014492 217 --EKPKCIFLTSPNNPDGSII-N---DEDLLKILEM-PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVLRTFSKRAGL 287 (423)
Q Consensus 217 --~~~~~i~l~~p~NPtG~~~-~---~~~l~~i~~~-~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~i~S~SK~~g~ 287 (423)
.++++|+++..+||||.+. + .+++.++|+. |+++|+||+|.+|...+. .........+ +.||||.|+.
T Consensus 200 ~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~~~~d---i~s~sK~~~~ 276 (433)
T 1zod_A 200 SSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGVTPD---ILTLSKTLGA 276 (433)
T ss_dssp CCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCS---EEEECHHHHT
T ss_pred CCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchHhHHhhcCCCCC---EEEecccccC
Confidence 4566666544468899755 4 5555566665 999999999998764332 1222222333 3489999994
Q ss_pred cCccccccccCHHHHHHHHHh--c--CCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc----CCCCeec
Q 014492 288 AGLRVGYGAFPLSIIEYLWRA--K--QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKD----VPFLNPY 359 (423)
Q Consensus 288 ~G~R~G~i~~~~~~~~~l~~~--~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~ 359 (423)
|+|+||+++++++++.+... . ..++.+++++.++.++|+..+- +...++++++++++.+.|++ ++.+...
T Consensus 277 -G~~ig~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~~~~~-~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~ 354 (433)
T 1zod_A 277 -GLPLAAIVTSAAIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQR-DGLVARANVMGDRLRRGLLDLMERFDCIGDV 354 (433)
T ss_dssp -TSSCEEEEECHHHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE
T ss_pred -CCCeeEEEEhHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE
Confidence 99999999999999988763 2 4467799999988888863111 23456666667777776655 3544444
Q ss_pred CCCceEEEEEeCCC--------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014492 360 PSYSNFILCEVTSG--------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM 420 (423)
Q Consensus 360 p~~~~~~~~~~~~~--------~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~ 420 (423)
++.|+|+|+++++. .+..++.+.|.++||.+.++..++.++++||+++ +.++++++.++|+
T Consensus 355 ~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~lRi~~~~~~t~~~i~~~l~~l~ 426 (433)
T 1zod_A 355 RGRGLLLGVEIVKDRRTKEPADGLGAKITRECMNLGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLLG 426 (433)
T ss_dssp EEETTEEEEEEEEETTTTEECTTHHHHHHHHHHHTTEECCEECCTTSCCEEEECCCTTCCHHHHHHHHHHHH
T ss_pred EEEEEEEEEEEecCccccCCChHHHHHHHHHHHHCCCeEeccCCCCCCCEEEEECCcCCCHHHHHHHHHHHH
Confidence 56788999988631 2367899999999999998775444589999865 3444444444443
No 131
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.98 E-value=1.7e-31 Score=257.93 Aligned_cols=313 Identities=12% Similarity=0.081 Sum_probs=223.7
Q ss_pred CeeEcCCCCCCCCCCHHHHHHHhcCCCCC--CCC-CcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCe
Q 014492 96 DIVKIDANENPYGPPPEVREALGQLKFPY--IYP-DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK 172 (423)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~--~Y~-~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~ 172 (423)
++++|+.+.+. ++++++.+++.+....+ .++ ..-..++++.+++++|.++++|++|+|+++++..+++.++++||+
T Consensus 14 ~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~g~~~~~~~~~~~l~~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~gd~ 92 (359)
T 1svv_A 14 KPYSFVNDYSV-GMHPKILDLMARDNMTQHAGYGQDSHCAKAARLIGELLERPDADVHFISGGTQTNLIACSLALRPWEA 92 (359)
T ss_dssp -CEECSCSCSS-CCCHHHHHHHHHHTTCCCCSTTCSHHHHHHHHHHHHHHTCTTSEEEEESCHHHHHHHHHHHHCCTTEE
T ss_pred eeEEecCCCcC-CCCHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHhCCCCccEEEeCCchHHHHHHHHHHhCCCCE
Confidence 46999997776 77899999998732211 111 223567888888889988899999999999999999999999999
Q ss_pred EEEcCCCchhhHH--HHHHCCCeEEEecCCCCCCCCHHHHHHHhhcC------CceEEEEcCCCCCcCcCCCHHHHHHHH
Q 014492 173 IVDCPPTFTMYEF--DAAVNGAAVVKVPRKSDFSLNVELIADAVERE------KPKCIFLTSPNNPDGSIINDEDLLKIL 244 (423)
Q Consensus 173 Vl~~~p~y~~~~~--~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~------~~~~i~l~~p~NPtG~~~~~~~l~~i~ 244 (423)
|+++.|+|..+.. .++..|++++.+|.+ ++.+|++++++.+++. ++++|++++| ||||.+++.+++++|+
T Consensus 93 vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~~~~~~l~~i~ 170 (359)
T 1svv_A 93 VIATQLGHISTHETGAIEATGHKVVTAPCP-DGKLRVADIESALHENRSEHMVIPKLVYISNT-TEVGTQYTKQELEDIS 170 (359)
T ss_dssp EEEETTSHHHHSSTTHHHHTTCCEEEECCT-TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSCCCCHHHHHHHH
T ss_pred EEEcccchHHHHHHHHHhcCCCeeEEEeCC-CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CCCceecCHHHHHHHH
Confidence 9999999998776 477899999999975 6789999999999754 3899999999 7999999966655554
Q ss_pred ---cC-CCEEEEccCCccccCC--Cchhhhhc-cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhc--CC--CC
Q 014492 245 ---EM-PILVVLDEAYTEFSGL--ESRMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK--QP--YN 313 (423)
Q Consensus 245 ---~~-~~~li~Deay~~~~~~--~~~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~--~~--~~ 313 (423)
+. |+++|+||+|..|..+ +.....+. .....+++.|++|..+ ..++|+++.++++++.+.... .. +.
T Consensus 171 ~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~g~--~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 248 (359)
T 1svv_A 171 ASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKAGG--MFGEALIILNDALKPNARHLIKQRGALMA 248 (359)
T ss_dssp HHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTTTC--SSCEEEEECSGGGCTTHHHHHHHTTCCCT
T ss_pred HHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhcCCEEEEecccCCC--CCceEEEEEcccHHHHHHHHHhcCCcccc
Confidence 44 9999999999554211 11001000 0112267778899533 345788888888877665432 22 22
Q ss_pred CcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCCCCCHHHHHHHHHhC-CcEEE
Q 014492 314 VSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTSGMDAKKLKDDLAKM-GVMIR 391 (423)
Q Consensus 314 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~~~~~~~l~~~L~~~-gI~v~ 391 (423)
.+.....++..++++ +.+++.+++++++++++.+.| +.+++.+ .|.+++|+|++++ .++.+.|.++ ||.+.
T Consensus 249 ~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~l~~~L-~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~gi~v~ 321 (359)
T 1svv_A 249 KGWLLGIQFEVLMKD-NLFFELGAHSNKMAAILKAGL-EACGIRLAWPSASNQLFPILE-----NTMIAELNNDFDMYTV 321 (359)
T ss_dssp TTHHHHHHHHHHTST-THHHHHHHHHHHHHHHHHHHH-HHTTCCBSSCCSSSEECBEEE-----HHHHHHHTTTEECEEE
T ss_pred cchhhHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHh-ccCCeEEccCCccceEEEEcC-----HHHHHHHHHhcCEEEE
Confidence 233333334456665 446788889999999999999 4444454 4778899998885 5788999877 99994
Q ss_pred eCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 392 HYNNKELKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 392 ~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
+.. +..++++||+++ +.++++++.++|++
T Consensus 322 ~~~-~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 353 (359)
T 1svv_A 322 EPL-KDGTCIMRLCTSWATEEKECHRFVEVLKR 353 (359)
T ss_dssp EEE-TTTEEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred ecc-cCCCceEEEEccCcCCHHHHHHHHHHHHH
Confidence 321 234679999875 34455555555543
No 132
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.97 E-value=2.9e-30 Score=252.63 Aligned_cols=306 Identities=18% Similarity=0.168 Sum_probs=230.0
Q ss_pred CCCCCCC-C---HHHHHHHhcC-CCC-CCC-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCeEE
Q 014492 103 NENPYGP-P---PEVREALGQL-KFP-YIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIV 174 (423)
Q Consensus 103 ~~~~~~~-~---~~v~~al~~~-~~~-~~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vl 174 (423)
.+++|++ | +++.+++.+. ..+ ..| +.++..++|+++++++|.+ ++|++++| ++++.+++.++ +++||+|+
T Consensus 5 ~~p~f~~~p~~~~~~~~a~~~~l~~~~~~~~~~~~~~~l~~~la~~~~~~-~~i~~~sG-t~al~~~l~~l~~~~gd~Vi 82 (388)
T 1b9h_A 5 KAPEFPAWPQYDDAERNGLVRALEQGQWWRMGGDEVNSFEREFAAHHGAA-HALAVTNG-THALELALQVMGVGPGTEVI 82 (388)
T ss_dssp CCCCCCCSSCCCHHHHHHHHHHHHTSCCBTTTCSHHHHHHHHHHHHTTCS-EEEEESCH-HHHHHHHHHHTTCCTTCEEE
T ss_pred cCCCCCCCCCCCHHHHHHHHHHHHcCCeeecCCHHHHHHHHHHHHHhCCC-eEEEeCCH-HHHHHHHHHHcCCCCcCEEE
Confidence 3556665 5 7888888762 221 234 6667899999999999975 67878877 89999999998 89999999
Q ss_pred EcCCCchhhHHHHHHCCCeEEEecCCC-CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEE
Q 014492 175 DCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVL 252 (423)
Q Consensus 175 ~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~ 252 (423)
++.|+|..+...++..|++++.++.+. ++.+|++++++.++ .++++|+ |+||||.+.+.+++.++|+. |++||+
T Consensus 83 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~-~~~~~v~---~~n~tG~~~~l~~i~~la~~~~~~li~ 158 (388)
T 1b9h_A 83 VPAFTFISSSQAAQRLGAVTVPVDVDAATYNLDPEAVAAAVT-PRTKVIM---PVHMAGLMADMDALAKISADTGVPLLQ 158 (388)
T ss_dssp EESSSCTHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCC-TTEEEEC---CBCGGGCCCCHHHHHHHHHHHTCCBCE
T ss_pred ECCCccHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcC-cCceEEE---EeCCccCcCCHHHHHHHHHHcCCEEEE
Confidence 999999999999999999999999764 47899999999996 6788777 99999999999999999998 999999
Q ss_pred ccCCcccc-CCCchhhhhccCCcEEEEccChhhhcccCccccccccCHH-H--HHHHHHhcC-----------------C
Q 014492 253 DEAYTEFS-GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-I--IEYLWRAKQ-----------------P 311 (423)
Q Consensus 253 Deay~~~~-~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~-~--~~~l~~~~~-----------------~ 311 (423)
|++|..+. +.+.... ..+ ++.+.||||..+++|.|+||++++++ + ++.+..... .
T Consensus 159 D~a~~~g~~~~~~~~~---~~~-~i~~~S~s~~K~l~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 234 (388)
T 1b9h_A 159 DAAHAHGARWQGKRVG---ELD-SIATFSFQNGKLMTAGEGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSN 234 (388)
T ss_dssp ECTTCTTCEETTEEGG---GSS-SCEEEECCTTSSSCSSSCEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCCCCSCCCB
T ss_pred ecchhcCCccCCeecc---ccc-ceEEEEccCCCcccCCCeEEEEECCHHHHHHHHHHHHHhCCCCccCccceeeccccc
Confidence 99998643 2222222 222 57889999776777789999998875 6 566644321 0
Q ss_pred CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecC-------CCceEEEEEeCCC--CCHHHHHHH
Q 014492 312 YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYP-------SYSNFILCEVTSG--MDAKKLKDD 382 (423)
Q Consensus 312 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p-------~~~~~~~~~~~~~--~~~~~l~~~ 382 (423)
+.++.+...++...+ +++++..++++++++++.+.|++++++.+.+ ..++++|+++++. .+.+++.+.
T Consensus 235 ~~~~~~~~a~~~~~~---~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 311 (388)
T 1b9h_A 235 MRLNEFSASVLRAQL---ARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLTEERRNALVDR 311 (388)
T ss_dssp CBCBHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTCCHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEEEEEEeCCcCcccHHHHHHH
Confidence 124555444433333 4567788888899999999999886666542 3478999999742 257889999
Q ss_pred HHhCCcEEEeCCCCC----------------------C-------CCeEEEEec----ChhhHHHHHHHHhh
Q 014492 383 LAKMGVMIRHYNNKE----------------------L-------KGYVRVSVG----KPEHTDALMECLMH 421 (423)
Q Consensus 383 L~~~gI~v~~~~~~~----------------------~-------~~~iRis~~----~~~~~~~l~~al~~ 421 (423)
|.++||.++.+..+. . .+.|||++. +.++++++.++|++
T Consensus 312 L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~~~~~~l~~ 383 (388)
T 1b9h_A 312 LVEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHATAEIIAD 383 (388)
T ss_dssp HHHTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHH
T ss_pred HHHCCCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCCCCCCCHHHHHHHHHHHHH
Confidence 999999998764321 0 135999975 45566777777665
No 133
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.97 E-value=7.2e-31 Score=258.08 Aligned_cols=310 Identities=15% Similarity=0.168 Sum_probs=236.5
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhcCCCCCCC-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCe
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQLKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDK 172 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l-~~~gd~ 172 (423)
.+++||+.+.++++ +++.+++.+......| +..+..++|+++++++|.+ ++++++|+++++..+++++ +++||+
T Consensus 30 ~~~id~~~~~~~~~--~~v~~a~~~~~~~~~y~~~~~~~~l~~~la~~~~~~--~~v~~~~Gt~a~~~~l~~~~~~~gd~ 105 (399)
T 2oga_A 30 VPFLDLKAAYEELR--AETDAAIARVLDSGRYLLGPELEGFEAEFAAYCETD--HAVGVNSGMDALQLALRGLGIGPGDE 105 (399)
T ss_dssp BCSCCHHHHHHHTH--HHHHHHHHHHHHHTCCSSSHHHHHHHHHHHHHTTSS--EEEEESCHHHHHHHHHHHTTCCTTCE
T ss_pred CcccccCcCCCCCC--HHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHCCC--eEEEecCHHHHHHHHHHHhCCCCcCE
Confidence 45788888887765 8888888763211245 4567889999999999975 5677777799999999998 899999
Q ss_pred EEEcCCCchhhHHHHHHCCCeEEEecCCC-CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEE
Q 014492 173 IVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILV 250 (423)
Q Consensus 173 Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~l 250 (423)
|+++.|+|..+...++..|++++.+|.++ ++.+|++++++.++ .++++|+ |+||||.+.+.+++.++|+. |+++
T Consensus 106 vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~-~~~~~v~---~~n~tG~~~~l~~i~~l~~~~~~~l 181 (399)
T 2oga_A 106 VIVPSHTYIASWLAVSATGATPVPVEPHEDHPTLDPLLVEKAIT-PRTRALL---PVHLYGHPADMDALRELADRHGLHI 181 (399)
T ss_dssp EEEESSSCTHHHHHHHHTTCEEEEECBCSSSSSBCHHHHHHHCC-TTEEEEC---CBCGGGCCCCHHHHHHHHHHHTCEE
T ss_pred EEECCCccHHHHHHHHHCCCEEEEEecCCCCCCcCHHHHHHhcC-CCCeEEE---EeCCcCCccCHHHHHHHHHHcCCEE
Confidence 99999999999999999999999999765 57899999999997 5788877 67899999999999999998 9999
Q ss_pred EEccCCcccc-CCCchhhhhccCCcEEEEccC--hhhhcccCccccccccC-HHHHHHHHHhcCC--------------C
Q 014492 251 VLDEAYTEFS-GLESRMEWVKKHDNLIVLRTF--SKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP--------------Y 312 (423)
Q Consensus 251 i~Deay~~~~-~~~~~~~~~~~~~~~i~i~S~--SK~~g~~G~R~G~i~~~-~~~~~~l~~~~~~--------------~ 312 (423)
|+||+|..+. +...... .. ..+++.|+ ||.+|.+| |.||++.+ +++++++...... +
T Consensus 182 i~Dea~~~g~~~~~~~~~---~~-~di~~~S~~~sK~~~~~G-~~g~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~g~~~ 256 (399)
T 2oga_A 182 VEDAAQAHGARYRGRRIG---AG-SSVAAFSFYPGKNLGCFG-DGGAVVTGDPELAERLRMLRNYGSRQKYSHETKGTNS 256 (399)
T ss_dssp CEECTTCTTCEETTEETT---CT-TCEEEEECCTTSSSCCSS-CCEEEEESCHHHHHHHHHHHBTTCSSTTCCCSCCCBC
T ss_pred EEECcccccCccCCeecc---cc-cCEEEEeCCCCccCCcCC-ceEEEEeCCHHHHHHHHHHHhcCccccccccccccCC
Confidence 9999998663 2222111 11 24888888 79999779 99999986 8888877654321 3
Q ss_pred CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCee--cCCCceEEE--EEeCCCCCHHHHHHHHHhCCc
Q 014492 313 NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNP--YPSYSNFIL--CEVTSGMDAKKLKDDLAKMGV 388 (423)
Q Consensus 313 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~p~~~~~~~--~~~~~~~~~~~l~~~L~~~gI 388 (423)
.++.+.+.++.++++. +++..++.+++++++.+.|++++++.+ .|+.++++| +.+. ..+..++.+.|.++||
T Consensus 257 ~~~~~~~a~~~~~l~~---~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~L~~~gI 332 (399)
T 2oga_A 257 RLDEMQAAVLRIRLAH---LDSWNGRRSALAAEYLSGLAGLPGIGLPVTAPDTDPVWHLFTVR-TERRDELRSHLDARGI 332 (399)
T ss_dssp CCCHHHHHHHHHHHHT---HHHHHHHHHHHHHHHHHHTTTCTTCBCCCCCTTEECCCSSEEEE-CSSHHHHHHHHHHTTB
T ss_pred CcCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCcceeEEEEEE-CCCHHHHHHHHHHCCC
Confidence 4577777777777754 345566667788889999988765543 345566665 3332 2478899999999999
Q ss_pred EEEeCCCCC----------------C-------CCeEEEEec---ChhhHHHHHHHHhh
Q 014492 389 MIRHYNNKE----------------L-------KGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 389 ~v~~~~~~~----------------~-------~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
.++++.... . .+++||++. +.++++++.++|++
T Consensus 333 ~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~ 391 (399)
T 2oga_A 333 DTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPIGPHLERPQALRVIDAVRE 391 (399)
T ss_dssp CCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHH
T ss_pred ceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEccCCCCCCHHHHHHHHHHHHH
Confidence 998743210 0 268999987 67777777777765
No 134
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.97 E-value=1.7e-31 Score=258.91 Aligned_cols=305 Identities=15% Similarity=0.079 Sum_probs=223.1
Q ss_pred eEcCCCCCCCCCCHHHHHHHhcCC------------CCCCCCCc--chHHHHHHHHHHhCCCCC-c-EEEeCCHHHHHHH
Q 014492 98 VKIDANENPYGPPPEVREALGQLK------------FPYIYPDP--ESRRLRAALAKDSGLESD-H-ILVGCGADELIDL 161 (423)
Q Consensus 98 i~l~~~~~~~~~~~~v~~al~~~~------------~~~~Y~~~--g~~~lr~~ia~~~g~~~~-~-i~~t~G~~~al~~ 161 (423)
+.+..+ +.++++.+++++.+.. ..++|+.. -.+++++.+++++|++++ + +++|+|+++++..
T Consensus 6 ~l~~~~--~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~i~~t~g~t~a~~~ 83 (362)
T 2c0r_A 6 YNFNAG--PAALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTGYKVLFIQGGASTQFAM 83 (362)
T ss_dssp EECCSS--SCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSSEEEEEESSHHHHHHHH
T ss_pred eeccCC--CCCCCHHHHHHHHHHHhhhhhcCccccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCchHHHHH
Confidence 444443 5778899999987632 12233332 245789999999999764 6 5788999999999
Q ss_pred HHHHhcCCCCeEEEcCCCchh--hHHHHHHCCCeEEEecCC--CCCC--CCHHHHHHHhhcCCceEEEEcCCCCCcCcCC
Q 014492 162 IMRCVLDPGDKIVDCPPTFTM--YEFDAAVNGAAVVKVPRK--SDFS--LNVELIADAVEREKPKCIFLTSPNNPDGSII 235 (423)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~--~~~~~~~~g~~~~~v~~~--~~~~--~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~ 235 (423)
++.+++++||+|++..+.+.. +...++..| +++.++.+ .+++ +|.++++ ++ +++|+|++++|+||||.++
T Consensus 84 ~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~-~~t~~v~~~~~~n~tG~~~ 159 (362)
T 2c0r_A 84 IPMNFLKEGQTANYVMTGSWASKALKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQ-DNAAYLHLTSNETIEGAQF 159 (362)
T ss_dssp HHHHHCCTTCEEEEEECSHHHHHHHHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CC-TTEEEEEEESEETTTTEEC
T ss_pred HHHhcCCCCCeEEEEecCcHhHHHHHHHHHhC-CeEEEecccccccccCCCHHHcc--cC-CCcCEEEEeCCcCccceec
Confidence 999999999999887766443 245667789 99999865 2233 4666553 54 6899999999999999974
Q ss_pred CHHHHHHHHcCCCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHh-------
Q 014492 236 NDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA------- 308 (423)
Q Consensus 236 ~~~~l~~i~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~------- 308 (423)
+ ++++| .|+++|+|++|..+..... +... .+++.|+||.+|++| +||+++++++++.+.+.
T Consensus 160 ~--~l~~i--~~~~vivD~a~~~~~~~~~----~~~~--d~~~~s~~K~~g~~G--~G~l~~~~~~~~~l~~~~~~~~~~ 227 (362)
T 2c0r_A 160 K--AFPDT--GSVPLIGDMSSDILSRPFD----LNQF--GLVYAGAQKNLGPSG--VTVVIVREDLVAESPKHLPTMLRY 227 (362)
T ss_dssp S--SCCCC--TTSCEEEECTTTTTSSCCC----GGGC--SEEEEETTTTTCCSS--CEEEEEEGGGSSSCCTTSCGGGCH
T ss_pred c--ccccc--CCCEEEEEChhhccCCccc----hhHC--cEEEEeccccccCcC--cEEEEEcHHHHhhccccCchHHhH
Confidence 4 23333 6999999999986643211 2223 377889999999888 89999988876555321
Q ss_pred -------cCCCCCcHHHHHHHHHHhCC-hH--HHHHHHHHHHHHHHHHHHHHccCCCC-eec----CCCceEEEEEeCCC
Q 014492 309 -------KQPYNVSVAAEVAACAALQN-PI--YLEKVKEALIKERERLFKLLKDVPFL-NPY----PSYSNFILCEVTSG 373 (423)
Q Consensus 309 -------~~~~~~~~~~~~a~~~~l~~-~~--~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~----p~~~~~~~~~~~~~ 373 (423)
...++++...+.++..+|+. .+ ++++.+++++++++++.+.|++++.+ .+. ...+.++++.++++
T Consensus 228 ~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (362)
T 2c0r_A 228 DTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRLASE 307 (362)
T ss_dssp HHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSSEEEEECSCH
T ss_pred HHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCChHHcCCcEEEEEcCCc
Confidence 23467888888888888875 22 57889999999999999999988733 432 12345678888755
Q ss_pred CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492 374 MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL 422 (423)
Q Consensus 374 ~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l 422 (423)
.+..++.+.|.++||.+.++... .+++|||++ +.++++++.++|+++
T Consensus 308 ~~~~~~~~~L~~~gi~~~~g~~~--~~~iRis~~~~~~~e~i~~l~~~l~~~ 357 (362)
T 2c0r_A 308 ELEKEFVKASEQEGFVGLKGHRS--VGGLRASIYNAVPYESCEALVQFMEHF 357 (362)
T ss_dssp HHHHHHHHHHHHTTEESCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHCCCeeccCCCC--CCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 56788999999999988776533 468999997 577777777777653
No 135
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.97 E-value=1.2e-30 Score=258.40 Aligned_cols=313 Identities=15% Similarity=0.196 Sum_probs=227.5
Q ss_pred CCCCCeeEcCCCC--CCCC-CCHHHHHHHhcC-CC----CCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492 92 RKPEDIVKIDANE--NPYG-PPPEVREALGQL-KF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (423)
Q Consensus 92 ~~~~~~i~l~~~~--~~~~-~~~~v~~al~~~-~~----~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~ 163 (423)
..++.++||..+. ++++ .+|++.+++.+. .. ...|+.+...++++.+++++| .++|++++|+++++..++
T Consensus 54 ~~g~~~lD~~~~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g--~~~v~~~~ggteA~~~al 131 (420)
T 2pb2_A 54 QQGKEYIDFAGGIAVTALGHCHPALVEALKSQGETLWHTSNVFTNEPALRLGRKLIDATF--AERVLFMNSGTEANETAF 131 (420)
T ss_dssp TTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCCCCCTTSCCHHHHHHHHHHHHHSS--CSEEEEESSHHHHHHHHH
T ss_pred CCCCEEEEccccccccccCCCCHHHHHHHHHHHHhcccccCccCCHHHHHHHHHHHhhCC--CCeEEEeCCHHHHHHHHH
Confidence 4567789998763 5555 478888888762 21 123555556789999999998 579999999999999999
Q ss_pred HHhcC-------CC-CeEEEcCCCchhhHH-HHHHCCCe------------EEEecCCCCCCCCHHHHHHHhhcCCceEE
Q 014492 164 RCVLD-------PG-DKIVDCPPTFTMYEF-DAAVNGAA------------VVKVPRKSDFSLNVELIADAVEREKPKCI 222 (423)
Q Consensus 164 ~~l~~-------~g-d~Vl~~~p~y~~~~~-~~~~~g~~------------~~~v~~~~~~~~d~~~l~~~i~~~~~~~i 222 (423)
+.+.. +| +.|++.+|+|+.+.. .....|.+ +..+|. .|++++++.+. +++++|
T Consensus 132 ~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-----~d~~~le~~i~-~~~~~v 205 (420)
T 2pb2_A 132 KLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPF-----NDLHAVKAVMD-DHTCAV 205 (420)
T ss_dssp HHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECT-----TCHHHHHHHCC-TTEEEE
T ss_pred HHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecC-----CCHHHHHHHhc-cCceEE
Confidence 98765 67 589999999976543 34445543 555553 38999999997 689999
Q ss_pred EEcCCCCCcCc-CCCHHHHHHHHcC----CCEEEEccCCccccCCCch--hhhhccCCcEEEEccChhhhcccCcccccc
Q 014492 223 FLTSPNNPDGS-IINDEDLLKILEM----PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYG 295 (423)
Q Consensus 223 ~l~~p~NPtG~-~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i 295 (423)
++++++|++|. +++.+.+++|++. |+++|+||+|.+|...+.. ....+..++++ ||||.++ +|+|+||+
T Consensus 206 i~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~~~~~~~~~~dii---t~sK~l~-~G~~iG~~ 281 (420)
T 2pb2_A 206 VVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGVTPDIL---TSAKALG-GGFPVSAM 281 (420)
T ss_dssp EECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE---EECGGGG-TTSCCEEE
T ss_pred EEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHHHHHhcCCCCCeE---Eeccccc-CCCceEEE
Confidence 99988998884 5787777666553 9999999999877654332 22233334444 6899999 89999999
Q ss_pred ccCHHHHHHHHH--hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccC----CCCeecCCCceEEEEE
Q 014492 296 AFPLSIIEYLWR--AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDV----PFLNPYPSYSNFILCE 369 (423)
Q Consensus 296 ~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~p~~~~~~~~~ 369 (423)
++++++++.+.. ....++.+++++.++.++|+..+. ++..++++++++++.+.|+++ +.+...++.|+|++++
T Consensus 282 ~~~~~l~~~l~~~~~~~t~~~~~~~~aa~~a~L~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~v~ 360 (420)
T 2pb2_A 282 LTTQEIASAFHVGSHGSTYGGNPLACAVAGAAFDIINT-PEVLQGIHTKRQQFVQHLQAIDEQFDIFSDIRGMGLLIGAE 360 (420)
T ss_dssp EECHHHHTTCC----CCEECCCHHHHHHHHHHHHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEEEE
T ss_pred EEhHHHHHhhcCCCcCcccCcCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecceEEEEE
Confidence 999988776654 233467899999988888764221 456677788888888888664 4333334568899999
Q ss_pred eCCCC--CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 370 VTSGM--DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 370 ~~~~~--~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
+++.. +..++.+.|.++||.+.+++ ++++||+++ +.++++++.+.|++
T Consensus 361 ~~~~~~~~~~~l~~~l~~~Gi~v~~~~----~~~iRl~~~~~~t~eei~~~~~~l~~ 413 (420)
T 2pb2_A 361 LKPKYKGRARDFLYAGAEAGVMVLNAG----ADVMRFAPSLVVEEADIHEGMQRFAQ 413 (420)
T ss_dssp ECGGGTTCHHHHHHHHHHTTEECEESS----TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred ECCCchHHHHHHHHHHHHCCCEEEeCC----CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 87432 68889999999999999875 579999954 45555555555543
No 136
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.97 E-value=1.3e-30 Score=258.30 Aligned_cols=280 Identities=14% Similarity=0.106 Sum_probs=218.4
Q ss_pred EcCCCCCCCCCCHHHHHHHhcCCCCCCCCC--cchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEc
Q 014492 99 KIDANENPYGPPPEVREALGQLKFPYIYPD--PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDC 176 (423)
Q Consensus 99 ~l~~~~~~~~~~~~v~~al~~~~~~~~Y~~--~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~ 176 (423)
+|+.+++++++++++.+++.+......|++ .+..++|++++++++. ++|++|+|+++++..++.++. +||+|+++
T Consensus 20 ~l~~~~p~~~~p~~~~~a~~~~~~~~~y~~~~~~~~~l~~~la~~~~~--~~v~~~~ggt~al~~~l~~l~-~gd~Vlv~ 96 (424)
T 2po3_A 20 PLLVGRPNRIDRARLYERLDRALDSQWLSNGGPLVREFEERVAGLAGV--RHAVATCNATAGLQLLAHAAG-LTGEVIMP 96 (424)
T ss_dssp CEETTCCCCCCHHHHHHHHHHHHHHTCCSSSCHHHHHHHHHHHHHHTS--SEEEEESCHHHHHHHHHHHHT-CCSEEEEE
T ss_pred cccccCCCCCChHHHHHHHHHHHhcCCcccCCHHHHHHHHHHHHHhCC--CeEEEeCCHHHHHHHHHHHcC-CCCEEEEC
Confidence 678889999988899888876321135765 5789999999999996 589999999999999999875 78999999
Q ss_pred CCCchhhHHHHHHCCCeEEEecCCC-CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEcc
Q 014492 177 PPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDE 254 (423)
Q Consensus 177 ~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~De 254 (423)
.|+|..+...++..|++++.++.+. ++.+|++++++.+. .++++|++++ |||...+.+++.++|+. |++||+||
T Consensus 97 ~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~-~~~~~v~~~~---~tG~~~~l~~i~~la~~~~~~li~De 172 (424)
T 2po3_A 97 SMTFAATPHALRWIGLTPVFADIDPDTGNLDPDQVAAAVT-PRTSAVVGVH---LWGRPCAADQLRKVADEHGLRLYFDA 172 (424)
T ss_dssp SSSCTHHHHHHHHTTCEEEEECBCTTTSSBCHHHHGGGCC-TTEEEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEEC
T ss_pred CCccHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhhC-cCCcEEEEEC---CCCCcCCHHHHHHHHHHcCCEEEEEC
Confidence 9999999999999999999999764 67899999999997 5899999864 89999999999999987 99999999
Q ss_pred CCcc-ccCCCchhhhhccCCcEEEEccChhhhcccCccccccccC-HHHHHHHHHhcCC-----C---------CCcHHH
Q 014492 255 AYTE-FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP-----Y---------NVSVAA 318 (423)
Q Consensus 255 ay~~-~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~-~~~~~~l~~~~~~-----~---------~~~~~~ 318 (423)
+|.. +.+.+.... ...+ +++.||||..+++|.|+||++++ +++++++...... + .++.+.
T Consensus 173 a~~~g~~~~~~~~~---~~~d-i~~~S~sk~K~l~~~~~G~~v~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~ 248 (424)
T 2po3_A 173 AHALGCAVDGRPAG---SLGD-AEVFSFHATKAVNAFEGGAVVTDDADLAARIRALHNFGFDLPGGSPAGGTNAKMSEAA 248 (424)
T ss_dssp TTCTTCEETTEETT---SSSS-EEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHHBTTTTCTTCCTTCCCBCCCCHHH
T ss_pred ccccCCeECCeecc---cccC-EEEEeCCCCCCccCCCCeEEEeCCHHHHHHHHHHHhcCccccccccccCcCCCcCHHH
Confidence 9994 544332221 2223 89999996667778999999998 8888888765432 1 123333
Q ss_pred HHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecC--CCc----eEEEEEeCC---CCCHHHHHHHHHhCCcE
Q 014492 319 EVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYP--SYS----NFILCEVTS---GMDAKKLKDDLAKMGVM 389 (423)
Q Consensus 319 ~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p--~~~----~~~~~~~~~---~~~~~~l~~~L~~~gI~ 389 (423)
..++ +...+++++..++.+++++++.+.|++++++.+.+ .++ .++++.+++ +.+..++.+.|.++||.
T Consensus 249 aa~~---l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~L~~~gI~ 325 (424)
T 2po3_A 249 AAMG---LTSLDAFPEVIDRNRRNHAAYREHLADLPGVLVADHDRHGLNNHQYVIVEIDEATTGIHRDLVMEVLKAEGVH 325 (424)
T ss_dssp HHHH---HHHHHHHHHHHHHHHHHHHHHHHHTCSCTTEEECCGGGGSCCCCCCEEEEECHHHHSSCHHHHHHHHHHTTEE
T ss_pred HHHH---HHHHHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCccccEEEEEEECCccchhhHHHHHHHHHHCCCc
Confidence 3322 22335567788888889999999999886565543 222 234477764 56789999999999999
Q ss_pred EEe
Q 014492 390 IRH 392 (423)
Q Consensus 390 v~~ 392 (423)
+++
T Consensus 326 v~~ 328 (424)
T 2po3_A 326 TRA 328 (424)
T ss_dssp CBC
T ss_pred eec
Confidence 987
No 137
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.97 E-value=7.3e-31 Score=261.24 Aligned_cols=321 Identities=13% Similarity=0.119 Sum_probs=221.2
Q ss_pred CCCCCeeEcCCCCC--CCC-CCHHHHHHHhc-CCCCC-----CCCCcchHHHHHHHHHHhCCCC-CcEEEeCCHHHHHHH
Q 014492 92 RKPEDIVKIDANEN--PYG-PPPEVREALGQ-LKFPY-----IYPDPESRRLRAALAKDSGLES-DHILVGCGADELIDL 161 (423)
Q Consensus 92 ~~~~~~i~l~~~~~--~~~-~~~~v~~al~~-~~~~~-----~Y~~~g~~~lr~~ia~~~g~~~-~~i~~t~G~~~al~~ 161 (423)
..+++++|+..+.+ +++ .+|++.+++.+ +.... .|++....++++.++++++... +++++|+|+++++..
T Consensus 40 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~ggsea~~~ 119 (439)
T 3dxv_A 40 ENGRELIDLSGAWGAASLGYGHPAIVAAVSAAAANPAGATILSASNAPAVTLAERLLASFPGEGTHKIWFGHSGSDANEA 119 (439)
T ss_dssp TTSCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHSCSCSCSSSSEEHHHHHHHHHHHHTTTCTTTEEEEEESSHHHHHHH
T ss_pred CCCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCHHHHHHH
Confidence 45677899998865 455 78999988875 22211 2233446789999999987656 799999999999999
Q ss_pred HHHHh--cCCCCeEEEcCCCchhhHHHHHHCCCe-E--------------EEecCCCCCCC-----CHHHHHHHhh---c
Q 014492 162 IMRCV--LDPGDKIVDCPPTFTMYEFDAAVNGAA-V--------------VKVPRKSDFSL-----NVELIADAVE---R 216 (423)
Q Consensus 162 ~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~g~~-~--------------~~v~~~~~~~~-----d~~~l~~~i~---~ 216 (423)
+++.+ ..+++.|++.+|+|+.+...+...+.. . ..+|.++.+.. |+++|++.+. .
T Consensus 120 al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~ 199 (439)
T 3dxv_A 120 AYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYRPYRNDPTGDAILTLLTEKLAAVPA 199 (439)
T ss_dssp HHHHHHHHHSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSSCBTTBTTSHHHHHHHHHHHHTSCT
T ss_pred HHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhcCC
Confidence 99975 335678888899987555444433222 1 23333222222 6999999984 3
Q ss_pred CCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCc--hhhhhccCCcEEEEccChhhhcccC
Q 014492 217 EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVLRTFSKRAGLAG 289 (423)
Q Consensus 217 ~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~i~S~SK~~g~~G 289 (423)
.++++|++++++|++|.+.+ .+++.++|+. |++||+||+|.+|...+. .....+...+++ ||||.++ +|
T Consensus 200 ~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~~~~~~~~~~~di~---s~sK~~~-~G 275 (439)
T 3dxv_A 200 GSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRLHCFEHEGFVPDIL---VLGKGLG-GG 275 (439)
T ss_dssp TCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSSSGGGGTTCCCSEE---EECGGGG-TT
T ss_pred CCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhcCCCCCEE---EEcchhc-CC
Confidence 57888998888999999988 7778888876 999999999997754332 122222233333 8999999 69
Q ss_pred ccccccccCHHHHHHHHHh--cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHc----cCCCCeecCCCc
Q 014492 290 LRVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLK----DVPFLNPYPSYS 363 (423)
Q Consensus 290 ~R~G~i~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~----~~~~~~~~p~~~ 363 (423)
+|+||+++++++++.+... ...+ .+++++.++.++|+..+. ++..++++++++++.+.|+ +++.+...++.|
T Consensus 276 ~riG~~~~~~~~~~~~~~~~~~~t~-~~~~~~~aa~aal~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g 353 (439)
T 3dxv_A 276 LPLSAVIAPAEILDCASAFAMQTLH-GNPISAAAGLAVLETIDR-DDLPAMAERKGRLLRDGLSELAKRHPLIGDIRGRG 353 (439)
T ss_dssp SCCEEEEEEHHHHTSCSSSSCCTTT-TCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEET
T ss_pred cceEEEEECHHHHhhhcCCCcCCCc-ccHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEE
Confidence 9999999999998877654 3447 899999998888864211 2334444445555544444 456555556778
Q ss_pred eEEEEEe--------CCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014492 364 NFILCEV--------TSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM 420 (423)
Q Consensus 364 ~~~~~~~--------~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~ 420 (423)
+|+++++ +++.+..++.+.|.++||.+++++. ..+++||+++ +.++++++.++|+
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~--~~~~iRi~~~~~~t~e~i~~~l~~l~ 419 (439)
T 3dxv_A 354 LACGMELVCDRQSREPARAETAKLIYRAYQLGLVVYYVGM--NGNVLEFTPPLTITETDIHKALDLLD 419 (439)
T ss_dssp TEEEEEEEEETTTTEECHHHHHHHHHHHHHHTEECEEEST--TSCEEEECCCTTCCHHHHHHHHHHHH
T ss_pred EEEEEEEecCccccCCCHHHHHHHHHHHHHCCcEEeecCC--CCCEEEEECCCCCCHHHHHHHHHHHH
Confidence 8998887 3334467889999989999998753 2589999865 3444444444443
No 138
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.97 E-value=1.3e-29 Score=248.34 Aligned_cols=308 Identities=16% Similarity=0.176 Sum_probs=233.8
Q ss_pred CeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCeE
Q 014492 96 DIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKI 173 (423)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l-~~~gd~V 173 (423)
++|+|+. +.+ ++++.+++.+. .....++.++..++|+++++++|. +++++++|+++++..++.++ +++||+|
T Consensus 9 ~~i~~~~--p~~--~~~~~~a~~~~~~~~~~~~~~~~~~l~~~la~~~~~--~~~~~~~~gt~al~~~~~~~~~~~gd~V 82 (393)
T 1mdo_A 9 DFLPFSR--PAM--GAEELAAVKTVLDSGWITTGPKNQELEAAFCRLTGN--QYAVAVSSATAGMHIALMALGIGEGDEV 82 (393)
T ss_dssp CCBCSCC--CCC--CHHHHHHHHHHHHHTCCSSSHHHHHHHHHHHHHHCC--SEEEEESCHHHHHHHHHHHTTCCTTCEE
T ss_pred cccccCC--CCC--CHHHHHHHHHHHhcCCcCCChHHHHHHHHHHHHhCC--CcEEEecChHHHHHHHHHHcCCCCCCEE
Confidence 4677775 443 47777887663 222223556788999999999996 48999999999999999999 8999999
Q ss_pred EEcCCCchhhHHHHHHCCCeEEEecCCC-CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEE
Q 014492 174 VDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVV 251 (423)
Q Consensus 174 l~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li 251 (423)
+++.|+|..+...++..|++++.++.++ ++.+|++++++.++ .++++|+++ ||||.+.+.+++.++|+. |+++|
T Consensus 83 l~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~-~~~~~v~~~---~~~G~~~~~~~i~~l~~~~~~~li 158 (393)
T 1mdo_A 83 ITPSMTWVSTLNMIVLLGANPVMVDVDRDTLMVTPEHIEAAIT-PQTKAIIPV---HYAGAPADLDAIYALGERYGIPVI 158 (393)
T ss_dssp EEESSSCHHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCC-TTEEEECCB---CGGGCCCCHHHHHHHHHHHTCCBC
T ss_pred EeCCCccHhHHHHHHHCCCEEEEEeccCCcCCCCHHHHHHhcC-CCceEEEEe---CCCCCcCCHHHHHHHHHHcCCeEE
Confidence 9999999999999999999999999764 46799999999997 588998876 489999999999999988 99999
Q ss_pred EccCCcccc-CCCchhhhhccCCcEEEEccChhhhcccCccccccccC-HHHHHHHHHhcCC------------------
Q 014492 252 LDEAYTEFS-GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP------------------ 311 (423)
Q Consensus 252 ~Deay~~~~-~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~-~~~~~~l~~~~~~------------------ 311 (423)
+||+|..+. +..... .. .++++.|+||..+++|.|+||++.+ +++++.+......
T Consensus 159 ~D~a~~~g~~~~~~~~---~~--~d~~~~S~~k~K~l~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 233 (393)
T 1mdo_A 159 EDAAHATGTSYKGRHI---GA--RGTAIFSFHAIKNITCAEGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQA 233 (393)
T ss_dssp EECTTCTTCEETTEET---TS--SSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHTBTTEECC-----------CC
T ss_pred EECccccCCeECCeec---CC--CCeEEEeCCCCCccccccceEEEeCCHHHHHHHHHHHhcCCcccchhhhcccccccc
Confidence 999999643 222211 11 5689999994444456699999986 7888887754321
Q ss_pred --------CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeec--C-----CCceEEEEEeCC---C
Q 014492 312 --------YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPY--P-----SYSNFILCEVTS---G 373 (423)
Q Consensus 312 --------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~--p-----~~~~~~~~~~~~---~ 373 (423)
+.++.+...++...++ .+++..++.+++++++.+.|++++ +.+. + ..++++|+.+++ +
T Consensus 234 ~~~~~g~~~~~~~~~~a~~~~~l~---~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 309 (393)
T 1mdo_A 234 EVLAPGYKYNLPDLNAAIALAQLQ---KLDALNARRAAIAAQYHQAMADLP-FQPLSLPSWEHIHAWHLFIIRVDEARCG 309 (393)
T ss_dssp EESSCCCBCCCCHHHHHHHHHHHH---THHHHHHHHHHHHHHHHHHHHTSS-CEECCCCSSCEECCCSCEEEECCHHHHS
T ss_pred cccccCccCCCCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhcCC-cccccCCCCCCCceeEEEEEEecccccc
Confidence 1235555444444443 355666777788899999998887 4432 2 345688999974 5
Q ss_pred CCHHHHHHHHHhCCcEEEeCCCC--------------C-------CCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492 374 MDAKKLKDDLAKMGVMIRHYNNK--------------E-------LKGYVRVSVG---KPEHTDALMECLMHL 422 (423)
Q Consensus 374 ~~~~~l~~~L~~~gI~v~~~~~~--------------~-------~~~~iRis~~---~~~~~~~l~~al~~l 422 (423)
.+..++.+.|.++||.++++..+ . ..+++||++. +.++++++.++|+++
T Consensus 310 ~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~ 382 (393)
T 1mdo_A 310 ITRDALMASLKTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVITALHQI 382 (393)
T ss_dssp SCHHHHHHHHHHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHhCCCCcccccCccccChhhhccCCccCChhHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHH
Confidence 68899999999999999876532 1 1348999997 677778888777653
No 139
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.97 E-value=2.3e-31 Score=257.47 Aligned_cols=307 Identities=10% Similarity=0.029 Sum_probs=223.4
Q ss_pred eeEcCCCCCCCCCCHHHHHHHhcC-CC-----------CCCCCCc--chHHHHHHHHHHhCCC-CCcEEEeCCH-HHHHH
Q 014492 97 IVKIDANENPYGPPPEVREALGQL-KF-----------PYIYPDP--ESRRLRAALAKDSGLE-SDHILVGCGA-DELID 160 (423)
Q Consensus 97 ~i~l~~~~~~~~~~~~v~~al~~~-~~-----------~~~Y~~~--g~~~lr~~ia~~~g~~-~~~i~~t~G~-~~al~ 160 (423)
++.++.+. .++++.+++++.+. .. .++|+.. ...++++.+++++|++ +++|++|+|+ ++++.
T Consensus 4 ~~~~~~g~--~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~v~~~~g~gt~al~ 81 (360)
T 1w23_A 4 VFNFNAGP--SALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDYQILFLQGGASLQFT 81 (360)
T ss_dssp CEECCSSS--CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHH
T ss_pred eEeecCCC--cCCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCcchHHHH
Confidence 46666654 47789999998763 21 0112211 2568999999999986 5699999999 99999
Q ss_pred HHHHHhcCC---CCeEEEcCCCchhhHHHHHHCCCeEEEecCCC-CCCCCHHHHHH-HhhcCCceEEEEcCCCCCcCcCC
Q 014492 161 LIMRCVLDP---GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIAD-AVEREKPKCIFLTSPNNPDGSII 235 (423)
Q Consensus 161 ~~~~~l~~~---gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~-~i~~~~~~~i~l~~p~NPtG~~~ 235 (423)
.++..++.+ ||.|+++.++|..+ ..++..| +++.+|.+. ++.+|++++++ .++ +++|+|++++|+||||.++
T Consensus 82 ~~~~~l~~~~~~g~~vi~~~~~~~~~-~~~~~~g-~~~~v~~~~~~~~~d~~~l~~~~i~-~~~k~v~~~~~~nptG~~~ 158 (360)
T 1w23_A 82 MLPMNLLTKGTIGNYVLTGSWSEKAL-KEAKLLG-ETHIAASTKANSYQSIPDFSEFQLN-ENDAYLHITSNNTIYGTQY 158 (360)
T ss_dssp HHHHHHCCTTCEEEEEECSHHHHHHH-HHHHTTS-EEEEEEECGGGTSCSCCCGGGCCCC-TTEEEEEEESEETTTTEEC
T ss_pred HHHHHhcCCCCcccEEEecchhHHHH-HHHHHhC-CeEEeecccccCcCCccchHhhccC-CCCCEEEEeCCCCCcceec
Confidence 999988865 55677666666543 3456789 999999753 34579999998 885 6899999999999999998
Q ss_pred CHHHHHHHHcCCCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhc------
Q 014492 236 NDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK------ 309 (423)
Q Consensus 236 ~~~~l~~i~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~------ 309 (423)
+ ++.+ +.|++||+||+|..+..... +... .++++|+||.+|++| +||+++++++++++....
T Consensus 159 ~--~i~~--~~~~~li~D~a~~~~~~~~~----~~~~--di~~~s~sK~~~~~G--~G~~~~~~~~~~~~~~~~~~~~~~ 226 (360)
T 1w23_A 159 Q--NFPE--INHAPLIADMSSDILSRPLK----VNQF--GMIYAGAQKNLGPSG--VTVVIVKKDLLNTKVEQVPTMLQY 226 (360)
T ss_dssp S--SCCC--CCSSCEEEECTTTTTSSCCC----GGGC--SEEEEETTTTTSCTT--CEEEEEEHHHHCSCCTTCCGGGCH
T ss_pred c--cccc--cCCceEEEechhhcCCCCcC----cccC--CEEEEEcccccCCCC--cEEEEEcHHHHhhcccCCcchhhh
Confidence 7 3433 34999999999987653211 1222 278999999998666 899999988876554321
Q ss_pred -------C-CCCCcHHHHHHHHHHhCCh--H-HHHHHHHHHHHHHHHHHHHHccCCCC-eec--CC--CceEEEEEeCCC
Q 014492 310 -------Q-PYNVSVAAEVAACAALQNP--I-YLEKVKEALIKERERLFKLLKDVPFL-NPY--PS--YSNFILCEVTSG 373 (423)
Q Consensus 310 -------~-~~~~~~~~~~a~~~~l~~~--~-~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~--p~--~~~~~~~~~~~~ 373 (423)
. ..+.+..++.++..+++.. . ++++.+++++++++++.+.|++++.+ ... |+ .+.++|+++++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (360)
T 1w23_A 227 ATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLMNVTFNLRNE 306 (360)
T ss_dssp HHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEESSCGGGBCSSEEEEECSSH
T ss_pred hhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHccCcccccCCchhccCcEEEEEcCCC
Confidence 1 1245666667676666541 2 67888999999999999999988743 432 32 245899999754
Q ss_pred CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492 374 MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL 422 (423)
Q Consensus 374 ~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l 422 (423)
.+..++.+.|.++||.+.++.. .++++||+++ +.++++++.++|+++
T Consensus 307 ~~~~~~~~~l~~~gi~~~~~~~--~~~~iRis~~~~~~~~~i~~~~~~l~~~ 356 (360)
T 1w23_A 307 ELNQQFLAKAKEQGFVGLNGHR--SVGGCRASIYNAVPIDACIALRELMIQF 356 (360)
T ss_dssp HHHHHHHHHHHHTTEESCBCCT--TTCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHCCeeeecCCC--CCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence 4567888888899999987653 2689999997 566667777766653
No 140
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.97 E-value=5e-30 Score=251.96 Aligned_cols=308 Identities=14% Similarity=0.112 Sum_probs=225.0
Q ss_pred CeeEcCCCCCCCCCCHHHHHHHhcC---CC--CCCCCCc--chHHHHHHHHHHhCCC-CCcEEE-eCCHHHHHHHHHHHh
Q 014492 96 DIVKIDANENPYGPPPEVREALGQL---KF--PYIYPDP--ESRRLRAALAKDSGLE-SDHILV-GCGADELIDLIMRCV 166 (423)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~---~~--~~~Y~~~--g~~~lr~~ia~~~g~~-~~~i~~-t~G~~~al~~~~~~l 166 (423)
+++.+.. .+.++++++++++.+. .. .+.|++. ..+++|+.+++++|++ +++|++ |+|+++++.++++++
T Consensus 40 ~~~~~~~--~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~i~~~t~g~t~al~~~~~~l 117 (398)
T 2fyf_A 40 RDGRFGS--GPSKVRLEQLQTLTTTAAALFGTSHRQAPVKNLVGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAFGL 117 (398)
T ss_dssp SSCBCCS--SSCCCCHHHHHGGGTTTTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETCHHHHHHHHHHHT
T ss_pred CCccccC--CCCCCCHHHHHHHhhcCCCccCcCcCCHHHHHHHHHHHHHHHHHhCCCCCceEEEeCCchhHHHHHHHHHh
Confidence 3455554 4567789999999772 11 1344443 2578999999999997 468998 999999999999999
Q ss_pred cCCCCeEEEcCCCchh-hHHHHHHC--CCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHH
Q 014492 167 LDPGDKIVDCPPTFTM-YEFDAAVN--GAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243 (423)
Q Consensus 167 ~~~gd~Vl~~~p~y~~-~~~~~~~~--g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i 243 (423)
+++| .+++..+.|.. ....+... |++++.++.++++..+. .+. .++++|++++|+||||.+++.+++.++
T Consensus 118 ~~~g-v~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~g~~~~~-----~i~-~~~~~v~~~~~~nptG~~~~~~~i~~~ 190 (398)
T 2fyf_A 118 IDKR-SLHLTYGEFSAKFASAVSKNPFVGEPIIITSDPGSAPEP-----QTD-PSVDVIAWAHNETSTGVAVAVRRPEGS 190 (398)
T ss_dssp CSSC-EEEEECSHHHHHHHHHHHHCTTSCCCEEEECCTTCCCCC-----CCC-TTCSEEEEESEETTTTEECCCCCCTTC
T ss_pred cCCC-eEEEeCCHHHHHHHHHHHHhCCCCceEEEecCCCCCCCc-----ccc-CCCCEEEEeCcCCCcceecchHHhhhh
Confidence 9887 22333444421 12244555 88888888765444432 243 689999999999999999999988776
Q ss_pred HcCCCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHh---------------
Q 014492 244 LEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA--------------- 308 (423)
Q Consensus 244 ~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~--------------- 308 (423)
.|+++|+|++|..+..... +.. ..+++.|+||.+|++| ++||+++++++++++.+.
T Consensus 191 --~~~~vivD~a~~~~~~~~~----~~~--~di~~~s~sK~~~~~g-g~g~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 261 (398)
T 2fyf_A 191 --DDALVVIDATSGAGGLPVD----IAE--TDAYYFAPQKNFASDG-GLWLAIMSPAALSRIEAIAATGRWVPDFLSLPI 261 (398)
T ss_dssp --C-CEEEEECTTTTTTSCCC----GGG--CSEEEECTTSTTCSCS-SEEEEEECHHHHHHHHHHHHTTCCCCGGGCHHH
T ss_pred --cCCeEEEEeccccCCcccC----ccc--CcEEEEecCcccCCCC-ceEEEEECHHHHHHhhcccccCCCCCcEEehHH
Confidence 6999999999987653211 111 3478999999999775 599999999998877432
Q ss_pred --------cCCCCCcHHHHHHHHHHhCC-hHH--HHHHHHHHHHHHHHHHHHHccCCCCeec---C-CCce-EEEEEeCC
Q 014492 309 --------KQPYNVSVAAEVAACAALQN-PIY--LEKVKEALIKERERLFKLLKDVPFLNPY---P-SYSN-FILCEVTS 372 (423)
Q Consensus 309 --------~~~~~~~~~~~~a~~~~l~~-~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~---p-~~~~-~~~~~~~~ 372 (423)
...++.+..++.++..+++. .+. +++.+++++++++++.+.|++++++.+. | ..++ ++|+++++
T Consensus 262 ~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~ 341 (398)
T 2fyf_A 262 AVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQERPYTTPFVTDPGLRSQVVGTIDFVD 341 (398)
T ss_dssp HHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHSTTEEESCCSGGGBCSSEEEEEECT
T ss_pred HhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHcCCceeccCChhhcCCcEEEEECCC
Confidence 12245677777777777764 222 7888999999999999999988656554 3 1344 89999987
Q ss_pred CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 373 GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 373 ~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
+.+..++.+.|.++||.++++.....++++||+++ +.++++++.++|++
T Consensus 342 ~~~~~~l~~~L~~~gI~v~~g~~~~~~~~iRis~~~~~t~e~i~~~~~~l~~ 393 (398)
T 2fyf_A 342 DVDAGTVAKILRANGIVDTEPYRKLGRNQLRVAMFPAVEPDDVSALTECVDW 393 (398)
T ss_dssp TSCHHHHHHHHHHTTCBCCSCCTTTCSSEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHCCcEEecCcccCCCCEEEEEecCCCCHHHHHHHHHHHHH
Confidence 78899999999988999987633223579999998 66777777777664
No 141
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.97 E-value=8.6e-31 Score=253.48 Aligned_cols=315 Identities=15% Similarity=0.022 Sum_probs=225.4
Q ss_pred CeeEcCCCCCCCCCCHHHHHHHhcCCCCCCC-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCe--
Q 014492 96 DIVKIDANENPYGPPPEVREALGQLKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK-- 172 (423)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~-- 172 (423)
..+-+..++|+++++|++.+++.+......| ++++..++++++++++|.+. . ++++|+++++..+++.++.+||.
T Consensus 14 ~~~~~~~~~~~~g~~p~v~~ai~~~~~~~~~~~~~~~~~l~~~la~~~~~~~-~-i~~~~g~~a~~~a~~~~~~~g~~~v 91 (359)
T 3pj0_A 14 PYKLGGNGPRNVGVLTEALQNIDDNLESDIYGNGAVIEDFETKIAKILGKQS-A-VFFPSGTMAQQIALRIWADRKENRR 91 (359)
T ss_dssp SEESSSSSCCBHHHHHHHTTTSCTTCBCCBTTBSHHHHHHHHHHHHHHTCSE-E-EEESCHHHHHHHHHHHHHHHHTCCE
T ss_pred chhhcCCCccccCCCHHHHHHHHhhcccCcccCCHHHHHHHHHHHHHhCCCc-E-EEeCCHHHHHHHHHHHHHhcCCCcE
Confidence 4467778899999999999998873222345 66778999999999999753 3 44577788999999999888886
Q ss_pred EEEcCCCchhhH---HHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCc-CcCCCHHHHHHHHc---
Q 014492 173 IVDCPPTFTMYE---FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPD-GSIINDEDLLKILE--- 245 (423)
Q Consensus 173 Vl~~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPt-G~~~~~~~l~~i~~--- 245 (423)
|+++.+.|.... ..+...|++++.+|. +++.+|++++++. . +++++|++++|+||+ |.+++.+++++|++
T Consensus 92 vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~d~~~l~~~-~-~~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~ 168 (359)
T 3pj0_A 92 VAYHPLSHLEIHEQDGLKELQQITPLLLGT-ANQLLTIDDIKSL-R-EPVSSVLIELPQREIGGQLPAFEELEKISEYCH 168 (359)
T ss_dssp EEECTTCHHHHSSTTHHHHHHCCEEEECSC-TTSCCCHHHHHTC-S-SCCSEEEEESSBGGGTSBCCCHHHHHHHHHHHH
T ss_pred EEEeccceeeehhcchHHHhcCceEEecCC-cCCCcCHHHHHhc-c-CCceEEEEEecccCCCcccCCHHHHHHHHHHHH
Confidence 555555554221 223457999999997 4568999999998 4 789999999999998 79999999966655
Q ss_pred C-CCEEEEccCCccccC---CCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC----CCCcHH
Q 014492 246 M-PILVVLDEAYTEFSG---LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP----YNVSVA 317 (423)
Q Consensus 246 ~-~~~li~Deay~~~~~---~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~----~~~~~~ 317 (423)
. |++||+|++|..+.. +....... ... .+++.|+||.++.++ . ||++.++++++.+.+.... ......
T Consensus 169 ~~~~~li~D~a~~~~~~~~~~~~~~~~~-~~~-d~~~~s~sK~~~~~~-g-g~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 244 (359)
T 3pj0_A 169 EQGISLHLDGARLWEITPFYQKSAEEIC-ALF-DSVYVSFYKGIGGIA-G-AILAGNDDFVQEAKIWKRRYGGDLISLYP 244 (359)
T ss_dssp HHTCEEEEEETTCGGGHHHHTCCHHHHH-TTC-SEEEEESSSTTCCSS-C-EEEEECHHHHHHHHHHHHHTTCCCSCCHH
T ss_pred HcCCEEEEECcchhcchhhhCCCHHHhh-ccC-CEEEEeccccCCCcc-e-EEEECCHHHHHHHHHHHHHhCCCcchhHH
Confidence 3 999999999875531 11122221 222 245568999887553 2 7888899999988764321 122233
Q ss_pred HHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCee--cCCCceEEEEEeCCC--CCHHHHHHHHHhCCcEEEeC
Q 014492 318 AEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNP--YPSYSNFILCEVTSG--MDAKKLKDDLAKMGVMIRHY 393 (423)
Q Consensus 318 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~p~~~~~~~~~~~~~--~~~~~l~~~L~~~gI~v~~~ 393 (423)
.+.++..++++ .. +..++++++++++.+.|++++++.+ .|+.++|+|++++.. .+..++.+.|.++||.++++
T Consensus 245 ~~~a~~~~l~~--~~-~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~g 321 (359)
T 3pj0_A 245 YILSADYYFEK--RI-GKMAEYFEAAKGLAERFNSCSGVKTVPEVPVSNMFHVYFENSADEIGAILTKIQDETGVGISGY 321 (359)
T ss_dssp HHHHHHHHHHH--HG-GGHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEESSCHHHHHHHHHHHHHHHCEECCSC
T ss_pred HHHHHHHHHHH--HH-HHhHHHHHHHHHHHHHHhhCCCceeeccCCcceEEEEEecCccchhHHHHHHHHHhcCcEecCC
Confidence 33333344432 22 3344567888999999999876665 468899999998632 24678888999999999998
Q ss_pred CCC--CCCCeEEEEecC---hhhHHHHHHHHhhh
Q 014492 394 NNK--ELKGYVRVSVGK---PEHTDALMECLMHL 422 (423)
Q Consensus 394 ~~~--~~~~~iRis~~~---~~~~~~l~~al~~l 422 (423)
..+ ...+++|++++. ..+.+++.+++++|
T Consensus 322 ~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l 355 (359)
T 3pj0_A 322 LQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCL 355 (359)
T ss_dssp CEEEETTEEEEEEECCTTGGGSCHHHHHHHHHHH
T ss_pred ccccCCCceEEEEEecCccccCCHHHHHHHHHHH
Confidence 653 345689999863 23468888888876
No 142
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.97 E-value=2.9e-30 Score=258.52 Aligned_cols=322 Identities=13% Similarity=0.079 Sum_probs=229.6
Q ss_pred CCCCCeeEcCCC--CCCCCC-CHHHHHHHhc-C---CCC---CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492 92 RKPEDIVKIDAN--ENPYGP-PPEVREALGQ-L---KFP---YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (423)
Q Consensus 92 ~~~~~~i~l~~~--~~~~~~-~~~v~~al~~-~---~~~---~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~ 161 (423)
..++++||+..| .++++. +|++.+++.+ + ... ..|+++...+|++.++++++.+.++|++|+|+++++..
T Consensus 48 ~~G~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~gGseA~~~ 127 (460)
T 3gju_A 48 NNGRKSIDAFAGLYCVNVGYGRQKIADAIATQAKNLAYYHAYVGHGTEASITLAKMIIDRAPKGMSRVYFGLSGSDANET 127 (460)
T ss_dssp TTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHHSCCCCCTTCCCHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHH
T ss_pred CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHH
Confidence 456789999887 566664 5888888765 2 111 23455556789999999988778899999999999999
Q ss_pred HHHHhcC--------CCCeEEEcCCCchhhHHHHHHCCC-------------eEEEecCCC-----CCCCC--------H
Q 014492 162 IMRCVLD--------PGDKIVDCPPTFTMYEFDAAVNGA-------------AVVKVPRKS-----DFSLN--------V 207 (423)
Q Consensus 162 ~~~~l~~--------~gd~Vl~~~p~y~~~~~~~~~~g~-------------~~~~v~~~~-----~~~~d--------~ 207 (423)
+++.+.. +++.|++..|+|+.+...+...+. .+..+|.+. +++.+ +
T Consensus 128 al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~ 207 (460)
T 3gju_A 128 NIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCA 207 (460)
T ss_dssp HHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHH
Confidence 9998764 468999999999866655443221 344455221 22344 5
Q ss_pred HHHHHHhhc---CCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEE
Q 014492 208 ELIADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIV 277 (423)
Q Consensus 208 ~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~ 277 (423)
++|++.+.+ .++++|+++.++|++|.+.+ .+++.++|+. |++||+||+|.+|...+.. ....+..+.+
T Consensus 208 ~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pdi-- 285 (460)
T 3gju_A 208 DKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGIKPDL-- 285 (460)
T ss_dssp HHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSE--
T ss_pred HHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCe--
Confidence 888888863 45677887777888888554 5556666665 9999999999988643321 2222233333
Q ss_pred EccChhhhcccC-ccccccccCHHHHHHHHHh---------cCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHH
Q 014492 278 LRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA---------KQPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERE 344 (423)
Q Consensus 278 i~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~~---------~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~ 344 (423)
.+|||+++ .| +|+||+++++++++.+... ...|+.+++++.++.++|+. +++.++.++..+..++
T Consensus 286 -~t~sK~l~-gG~~~lg~v~~~~~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~ 363 (460)
T 3gju_A 286 -ITIAKGLT-SAYAPLSGVIVADRVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELIDEMDLVTNAGETGAYFRA 363 (460)
T ss_dssp -EEECGGGT-TTSSCCEEEEEEHHHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred -eeeehhhc-CCCCCeEEEEECHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 36889987 46 8999999999999988632 23578899999999998873 4566777777777788
Q ss_pred HHHHHHccCCCCeecCCCceEEEEEeCCCCC-----------HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---Chh
Q 014492 345 RLFKLLKDVPFLNPYPSYSNFILCEVTSGMD-----------AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPE 410 (423)
Q Consensus 345 ~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~-----------~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~ 410 (423)
.+.+.+++++.+...++.|.|+++.+.+..+ ..++.+.|.++||.+++++ ..+++||++. +.+
T Consensus 364 ~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~---~~~~iRi~~~~~~t~e 440 (460)
T 3gju_A 364 ELAKAVGGHKNVGEVRGDGMLAAVEFVADKDDRVFFDASQKIGPQVATALAASGVIGRAMP---QGDILGFAPPLCLTRE 440 (460)
T ss_dssp HHHHHHTTSTTEEEEEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEECS---SSCEEEECCCTTCCHH
T ss_pred HHHHHHhcCCCeEEEeeeeEEEEEEEccCccccccccchHHHHHHHHHHHHHCCeEEecCC---CCCEEEEECCCCCCHH
Confidence 8888888877665566778899988863221 5678899999999999876 3589999954 444
Q ss_pred hHHHHHHHHh
Q 014492 411 HTDALMECLM 420 (423)
Q Consensus 411 ~~~~l~~al~ 420 (423)
+++++.++|+
T Consensus 441 ~i~~~l~~l~ 450 (460)
T 3gju_A 441 QADIVVSKTA 450 (460)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5555554444
No 143
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.97 E-value=1.5e-30 Score=258.69 Aligned_cols=316 Identities=16% Similarity=0.113 Sum_probs=220.5
Q ss_pred CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CC--CCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHH
Q 014492 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LK--FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (423)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~--~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~ 164 (423)
+..+++++|+..+. ++++ .+|++.+++.+ +. ...+|+++...+|+++++++++ .+++|++++|+++++..+++
T Consensus 51 d~~g~~ylD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~l~~~la~~~~-~~~~v~~~~sGsea~~~ai~ 129 (434)
T 3l44_A 51 DVDGNKYIDYLAAYGPIITGHAHPHITKAITTAAENGVLYGTPTALEVKFAKMLKEAMP-ALDKVRFVNSGTEAVMTTIR 129 (434)
T ss_dssp ETTCCEEEECCGGGTTCSSCBTCHHHHHHHHHHHHHCSCCSSCCHHHHHHHHHHHHHCT-TCSEEEEESSHHHHHHHHHH
T ss_pred ECCCCEEEECCCchhccccCCCCHHHHHHHHHHHHhCcCCCCCCHHHHHHHHHHHHhCC-CCCEEEEeCchHHHHHHHHH
Confidence 34567899998774 6676 48999988876 22 2245787778899999999997 68899999999999999998
Q ss_pred HhcC--CCCeEEEcCCCchhhHHHHHHCCC--------------------eEEEecCCCCCCCCHHHHHHHhhc--CCce
Q 014492 165 CVLD--PGDKIVDCPPTFTMYEFDAAVNGA--------------------AVVKVPRKSDFSLNVELIADAVER--EKPK 220 (423)
Q Consensus 165 ~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~--------------------~~~~v~~~~~~~~d~~~l~~~i~~--~~~~ 220 (423)
.+.. +++.|++..|+|+.+...+...+. .++.+|. .|++++++.+.+ .+++
T Consensus 130 ~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~ 204 (434)
T 3l44_A 130 VARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPF-----NNVETLKEALDKWGHEVA 204 (434)
T ss_dssp HHHHHHCCCEEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECT-----TCHHHHHHHHHHHGGGEE
T ss_pred HHHHhhCCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCc-----ccHHHHHHHHHhCCCCEE
Confidence 7654 678999999999865543332222 1222221 189999998863 3566
Q ss_pred EEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEEEccChhhhcccCcccc
Q 014492 221 CIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVG 293 (423)
Q Consensus 221 ~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~g~~G~R~G 293 (423)
+|+++.++|++|.+.+ .+++.++|+. |++||+||+|.+| ..+.. ....+.... +.||||.++ +|+|+|
T Consensus 205 ~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~~~~~~~~~~~~d---i~t~sK~~~-~G~~iG 279 (434)
T 3l44_A 205 AILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMYGGAQDLLGVTPD---LTALGKVIG-GGLPIG 279 (434)
T ss_dssp EEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSSSCHHHHHTCCCS---EEEEEGGGG-TTSSCE
T ss_pred EEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-eccccHHHHHcCCCCC---eeehhhhhc-CCcCee
Confidence 7776666777888886 7777778877 9999999999988 33221 222222233 447899998 899999
Q ss_pred ccccCHHHHHHHHH-----hcCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceE
Q 014492 294 YGAFPLSIIEYLWR-----AKQPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNF 365 (423)
Q Consensus 294 ~i~~~~~~~~~l~~-----~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~ 365 (423)
|+++++++++.+.+ ...+++.+++++.++.++|+. +++.++.++..+..++.|.+.+...+.....++.++|
T Consensus 280 ~~~~~~~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~ 359 (434)
T 3l44_A 280 AYGGKKEIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQEGLYEKLDELGATLEKGILEQAAKHNIDITLNRLKGA 359 (434)
T ss_dssp EEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEETTE
T ss_pred eEEEcHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEeeccE
Confidence 99999999988765 234578899999998888863 3344444444444444444444445554445667888
Q ss_pred EEEEeCCC-------------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHhh
Q 014492 366 ILCEVTSG-------------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLMH 421 (423)
Q Consensus 366 ~~~~~~~~-------------~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~~ 421 (423)
+++.+.+. ....++.+.|.++||.+++++ .+++|+++. +.++++++.++|++
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~----~~~~rl~~~~t~e~i~~~l~~l~~ 425 (434)
T 3l44_A 360 LTVYFTTNTIEDYDAAQDTDGEMFGKFFKLMLQEGVNLAPSK----YEAWFLTTEHTKEDIEYTIEAVGR 425 (434)
T ss_dssp EEEEESSSCCCSHHHHHHSCHHHHHHHHHHHHHTTEECCSST----TCCEECCTTCCHHHHHHHHHHHHH
T ss_pred EEEEEecCcccchhhccccCHHHHHHHHHHHHHCCeEEeecC----CCcEEEecccCHHHHHHHHHHHHH
Confidence 88887421 123678888999999999875 357899754 44455555555443
No 144
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.97 E-value=4.7e-30 Score=253.29 Aligned_cols=306 Identities=13% Similarity=0.094 Sum_probs=226.5
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCC-------C---CcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQL-KFPYIY-------P---DPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y-------~---~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~ 163 (423)
++.++|+.+.+. ++++.+.+++.+. ....++ + .....++++++++++|+++++|++|+|+++++..++
T Consensus 27 ~~~~yld~~~~~-~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~al 105 (416)
T 1qz9_A 27 EGVIYLDGNSLG-ARPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLATLIGARDGEVVVTDTTSINLFKVL 105 (416)
T ss_dssp TTCEECCTTTSC-CCBTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHHTTTTCCTTSEEECSCHHHHHHHHH
T ss_pred CCeEeecCCCcC-CCcHHHHHHHHHHHHHHHhccCccccchhhHHHHHHHHHHHHHHHcCCCcccEEEeCChhHHHHHHH
Confidence 346899988776 5567777877652 211111 1 123578999999999998899999999999999888
Q ss_pred HHhc------CCCCe-EEEcCCCchhhHHH----HHHC--CCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCC
Q 014492 164 RCVL------DPGDK-IVDCPPTFTMYEFD----AAVN--GAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNP 230 (423)
Q Consensus 164 ~~l~------~~gd~-Vl~~~p~y~~~~~~----~~~~--g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NP 230 (423)
..++ ++||+ |++..++|+.+... ++.. |++++.+|. ++++++.+. .++++|++++|+||
T Consensus 106 ~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~-------~~~l~~~i~-~~~~~v~~~~~~np 177 (416)
T 1qz9_A 106 SAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS-------PEELPQAID-QDTAVVMLTHVNYK 177 (416)
T ss_dssp HHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS-------GGGHHHHCS-TTEEEEEEESBCTT
T ss_pred HhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc-------HHHHHHHhC-CCceEEEEeccccC
Confidence 8776 89987 55556688754433 3334 999999985 688888886 68999999999999
Q ss_pred cCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccc-cccccCHHHHHHHHHh
Q 014492 231 DGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRV-GYGAFPLSIIEYLWRA 308 (423)
Q Consensus 231 tG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~-G~i~~~~~~~~~l~~~ 308 (423)
||.+++.+++.++|+. |+++|+||+|..... +.... ..+..+++.|++|.++ +|.++ ||+++++++++.+...
T Consensus 178 tG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~-~~~~~---~~~~d~~~~s~~K~l~-~g~~~~g~l~~~~~~~~~l~~~ 252 (416)
T 1qz9_A 178 TGYMHDMQALTALSHECGALAIWDLAHSAGAV-PVDLH---QAGADYAIGCTYKYLN-GGPGSQAFVWVSPQLCDLVPQP 252 (416)
T ss_dssp TCBBCCHHHHHHHHHHHTCEEEEECTTTTTTS-CCCHH---HHTCSEEEECSSSTTC-CCTTCCCEEEECTTTTTTSCCS
T ss_pred cccccCHHHHHHHHHHcCCEEEEEccccccCc-CCChh---hcCCCEEEecCcccCC-CCCCCeEEEEECHHHHhccCCC
Confidence 9999999999999998 999999999984322 11111 1234488899999874 67888 9999998876655431
Q ss_pred -------------------------cCCCCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccC-C--CCee
Q 014492 309 -------------------------KQPYNVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDV-P--FLNP 358 (423)
Q Consensus 309 -------------------------~~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-~--~~~~ 358 (423)
...++.+..++.++.++++. .+++++.+++++++++++.+.|+++ + ++.+
T Consensus 253 ~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~ 332 (416)
T 1qz9_A 253 LSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVEQRCAAHELTL 332 (416)
T ss_dssp CCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEE
T ss_pred ccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhccCCCeEE
Confidence 11235677777776666654 2457788999999999999999875 4 4554
Q ss_pred cCC-----CceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec----ChhhHHHHHHHHhh
Q 014492 359 YPS-----YSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG----KPEHTDALMECLMH 421 (423)
Q Consensus 359 ~p~-----~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~----~~~~~~~l~~al~~ 421 (423)
.++ .+++++++++ +..++.+.|.++||.+... .++++||+++ +.++++++.++|++
T Consensus 333 ~~~~~~~~~~~~~~~~~~---~~~~l~~~l~~~gi~~~~~----~~~~lRis~~~~~~t~~~i~~~~~~l~~ 397 (416)
T 1qz9_A 333 VTPREHAKRGSHVSFEHP---EGYAVIQALIDRGVIGDYR----EPRIMRFGFTPLYTTFTEVWDAVQILGE 397 (416)
T ss_dssp CSCSSGGGBCSEEEEECT---THHHHHHHHHTTTEECEEE----TTTEEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred eCCCCHHHcCCEEEEecC---CHHHHHHHHHhCCcEeccC----CCCeEEEeCcccCCCHHHHHHHHHHHHH
Confidence 333 3678899986 3788999999999998653 2589999986 56666666666654
No 145
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.97 E-value=6.7e-30 Score=255.32 Aligned_cols=324 Identities=11% Similarity=0.065 Sum_probs=222.5
Q ss_pred CCCCCeeEcCCC--CCCCCC-CHHHHHHHhc-CCCC----CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492 92 RKPEDIVKIDAN--ENPYGP-PPEVREALGQ-LKFP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (423)
Q Consensus 92 ~~~~~~i~l~~~--~~~~~~-~~~v~~al~~-~~~~----~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~ 163 (423)
..++++||+..| .+.++. +|++.+++.+ +... ..|++....++++.++++++.+.+ |++|+|+++++..++
T Consensus 46 ~~g~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~-v~~~~ggseA~~~al 124 (452)
T 3n5m_A 46 IQGKRYLDGMSGLWCVNSGYGRKELAEAAYKQLQTLSYFPMSQSHEPAIKLAEKLNEWLGGEYV-IFFSNSGSEANETAF 124 (452)
T ss_dssp TTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHTTCCCCCTTSEEHHHHHHHHHHHHHHTSCEE-EEEESSHHHHHHHHH
T ss_pred CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHHhCCCCce-EEEeCchHHHHHHHH
Confidence 456789999887 456654 6899988876 3221 234444567899999999987666 999999999999999
Q ss_pred HHhc-----C---CCCeEEEcCCCchhhHHHHHHCCCe-------------EEEecCCCCCCC---C---------HHHH
Q 014492 164 RCVL-----D---PGDKIVDCPPTFTMYEFDAAVNGAA-------------VVKVPRKSDFSL---N---------VELI 210 (423)
Q Consensus 164 ~~l~-----~---~gd~Vl~~~p~y~~~~~~~~~~g~~-------------~~~v~~~~~~~~---d---------~~~l 210 (423)
+.++ . +++.|++..|+|+.+...+...+.. +..++....+.. | +++|
T Consensus 125 ~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 204 (452)
T 3n5m_A 125 KIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEV 204 (452)
T ss_dssp HHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHH
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHH
Confidence 9876 4 7799999999998776555544322 334442211111 2 8999
Q ss_pred HHHhh---cCCceEEEEcCC-CCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEEEc
Q 014492 211 ADAVE---REKPKCIFLTSP-NNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLR 279 (423)
Q Consensus 211 ~~~i~---~~~~~~i~l~~p-~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~ 279 (423)
++.+. ..++++|+++.+ +| ||.+++ ++++.++|+. |++||+||+|.+|...+.. ....+.... +.
T Consensus 205 e~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~~~d---i~ 280 (452)
T 3n5m_A 205 DRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAFGFMNYDVKPD---II 280 (452)
T ss_dssp HHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCS---EE
T ss_pred HHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccchhhhcCCCCC---EE
Confidence 99886 346778888877 89 998875 5556666666 9999999999988643322 122222223 33
Q ss_pred cChhhhcccC-ccccccccCHHHHHHHHH--------hcCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHH
Q 014492 280 TFSKRAGLAG-LRVGYGAFPLSIIEYLWR--------AKQPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLF 347 (423)
Q Consensus 280 S~SK~~g~~G-~R~G~i~~~~~~~~~l~~--------~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~ 347 (423)
+|||.++. | +|+||+++++++++.+.. ....++.+++++.++.++|+. +++.++.++..+..++.|.
T Consensus 281 t~sK~l~~-G~~~ig~~~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~ 359 (452)
T 3n5m_A 281 TMAKGITS-AYLPLSATAVKREIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIENENLIERSAQMGSLLLEQLK 359 (452)
T ss_dssp EECGGGGT-TSSCCEEEEEEHHHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred eecccccC-CCcceEEEEECHHHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 68999985 9 999999999999988743 123477899999999988874 2344444444455555555
Q ss_pred HHHccCCCCeecCCCceEEEEEeCCCC---------CHHHHHHHHHhCCcEEEeCCC--CCCCCeEEEEecChhhHHHHH
Q 014492 348 KLLKDVPFLNPYPSYSNFILCEVTSGM---------DAKKLKDDLAKMGVMIRHYNN--KELKGYVRVSVGKPEHTDALM 416 (423)
Q Consensus 348 ~~L~~~~~~~~~p~~~~~~~~~~~~~~---------~~~~l~~~L~~~gI~v~~~~~--~~~~~~iRis~~~~~~~~~l~ 416 (423)
+.+++++.+...++.|.|+++.+.+.. ...++++.|.++||.++++.. ...++++||+++...+.+++.
T Consensus 360 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~~~iRi~~~~~~t~e~i~ 439 (452)
T 3n5m_A 360 EEIGEHPLVGDIRGKGLLVGIELVNDKETKEPIDNDKIASVVNACKEKGLIIGRNGMTTAGYNNILTLAPPLVISSEEIA 439 (452)
T ss_dssp HHHTTCTTEEEEEESSSCEEEEEEEETTTTEECCHHHHHHHHHHHHHTTEECEECTTSSTTCCCEEEECCCTTCCHHHHH
T ss_pred HHHhcCCCeEEEEEEEEEEEEEEecCCcccCCCCHHHHHHHHHHHHHCCcEEeecCcccCCCCCEEEEECCCCCCHHHHH
Confidence 555566655555677888888774211 135688888999999998764 334689999765332234444
Q ss_pred HHHhh
Q 014492 417 ECLMH 421 (423)
Q Consensus 417 ~al~~ 421 (423)
+++++
T Consensus 440 ~~l~~ 444 (452)
T 3n5m_A 440 FVIGT 444 (452)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44444
No 146
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.97 E-value=1.5e-29 Score=248.61 Aligned_cols=308 Identities=15% Similarity=0.155 Sum_probs=217.7
Q ss_pred EcCCCCCCCCCC----HHHHHHHhcC---CCCCC---CCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcC
Q 014492 99 KIDANENPYGPP----PEVREALGQL---KFPYI---YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLD 168 (423)
Q Consensus 99 ~l~~~~~~~~~~----~~v~~al~~~---~~~~~---Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~ 168 (423)
.++.+++++.++ +.+.+++... ...+. |+++...++++++++++|.+ +.+ +++++++++..++.++++
T Consensus 24 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~-~~i-~~~sG~~a~~~~l~~~~~ 101 (398)
T 2rfv_A 24 TGALSTPIFQTSTFVFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLERGE-AGL-ATASGISAITTTLLTLCQ 101 (398)
T ss_dssp TCCSSCCCCCCSBCCCSSHHHHHHHC-----CCSBTTTCCHHHHHHHHHHHHHHTCS-EEE-EESSHHHHHHHHHHHHCC
T ss_pred CCCcCCCCcCCCccccCCHHHHHHhhcCCCCCCceeCCCChHHHHHHHHHHHHhCCC-cEE-EECCHHHHHHHHHHHHhC
Confidence 345556666543 3444554411 11122 35566789999999999975 444 455556999999999999
Q ss_pred CCCeEEEcCCCchhhHHHH----HHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHH
Q 014492 169 PGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL 244 (423)
Q Consensus 169 ~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~ 244 (423)
+||+|+++.|+|+.+...+ +..|++++.+|.+ |++++++.++ +++++|++++|+||||.+++.+++.++|
T Consensus 102 ~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~-~~~~~v~~~~~~nptG~~~~l~~i~~l~ 175 (398)
T 2rfv_A 102 QGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAA-----KPEEIRAAMR-PETKVVYIETPANPTLSLVDIETVAGIA 175 (398)
T ss_dssp TTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTT-----SHHHHHHHCC-TTEEEEEEESSBTTTTBCCCHHHHHHHH
T ss_pred CCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCC-----CHHHHHHhcC-CCCeEEEEECCCCCCCcccCHHHHHHHH
Confidence 9999999999999877765 7789999999853 8999999997 6899999999999999999999999999
Q ss_pred cC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccc-cccccCHHHHH-HHHHhcC---CCCCcHHH
Q 014492 245 EM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRV-GYGAFPLSIIE-YLWRAKQ---PYNVSVAA 318 (423)
Q Consensus 245 ~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~-G~i~~~~~~~~-~l~~~~~---~~~~~~~~ 318 (423)
+. |+++|+||+|..+.... .. ..+.++++.|+||.++.+|+|+ ||+++++++++ .+..... .++.+++.
T Consensus 176 ~~~~~~li~De~~~~~~~~~-~~----~~~~di~~~s~sK~~~~~g~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (398)
T 2rfv_A 176 HQQGALLVVDNTFMSPYCQQ-PL----QLGADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFVGLKDITGGCMSPFN 250 (398)
T ss_dssp HHTTCEEEEECTTTCTTTCC-GG----GGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTHHHHTTCCCCCHHH
T ss_pred HHcCCEEEEECCCcccccCC-ch----hhCCcEEEEeCcccccCCCCceEEEEEECHHHHHHHHHHHHHhCCCCCCCHHH
Confidence 87 99999999999766532 21 2346799999999998899998 99999998877 5553332 35788899
Q ss_pred HHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCC--------------Ceec----CCCceEEEEEeCCC-CCHHHH
Q 014492 319 EVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPF--------------LNPY----PSYSNFILCEVTSG-MDAKKL 379 (423)
Q Consensus 319 ~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~--------------~~~~----p~~~~~~~~~~~~~-~~~~~l 379 (423)
+.++.++++.. ....++..++.+.+.+.|++.+. +.+. .+.++++++++++. .+...+
T Consensus 251 ~~~~~~~l~~~---~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l 327 (398)
T 2rfv_A 251 AWLTLRGVKTL---GIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAGGLEAGRRM 327 (398)
T ss_dssp HHHHHHHHTTH---HHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHHHHHHHH
T ss_pred HHHHHhhhhhH---HHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCHHHHHHH
Confidence 99988888762 23334455566666676665431 1111 13577888898631 122233
Q ss_pred HHHHHhCCcEEEeCCCC-----------------------CCCCeEEEEecC---hhhHHHHHHHHhhh
Q 014492 380 KDDLAKMGVMIRHYNNK-----------------------ELKGYVRVSVGK---PEHTDALMECLMHL 422 (423)
Q Consensus 380 ~~~L~~~gI~v~~~~~~-----------------------~~~~~iRis~~~---~~~~~~l~~al~~l 422 (423)
.+.+...|+.+++|+.+ ..++++|||++. .++.++|.++|+++
T Consensus 328 ~~~~~~~~i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 396 (398)
T 2rfv_A 328 INSVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEHAIRKA 396 (398)
T ss_dssp HTTCSSSEECSCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred HHhCCcceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHhh
Confidence 33333346766666321 116899999985 44555566666543
No 147
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.97 E-value=2.9e-30 Score=257.83 Aligned_cols=310 Identities=16% Similarity=0.158 Sum_probs=221.2
Q ss_pred CeeEcCCC-CCCCCCCHHHHHHHhcC-----CC-CCCC---CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHH
Q 014492 96 DIVKIDAN-ENPYGPPPEVREALGQL-----KF-PYIY---PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC 165 (423)
Q Consensus 96 ~~i~l~~~-~~~~~~~~~v~~al~~~-----~~-~~~Y---~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~ 165 (423)
+++.++.+ +++++.++.+.++.... .. .+.| +++...++++.+++++|.+ ++++++|+++++..++.
T Consensus 90 ~~i~l~~g~~~~~~~~~~i~~a~~~~~~~~~~~~~~~Y~~~g~~~~~~l~~~la~~~g~~--~~i~~~sGt~al~~~l~- 166 (464)
T 1ibj_A 90 LLVNLDNKFDPFDAMSTPLYQTATFKQPSAIENGPYDYTRSGNPTRDALESLLAKLDKAD--RAFCFTSGMAALSAVTH- 166 (464)
T ss_dssp HHTCCCCSSCTTCCSSCCCCCCSBCCCSSSSCCCSCSBTTTCCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHT-
T ss_pred eEEECCCCCCCCCCCCccHHhhhhhhhhcccccCCccccCCCCHHHHHHHHHHHHHhCCC--eEEEECCHHHHHHHHHH-
Confidence 46778776 66777777776666531 11 2345 3344567899999999864 66777777889998886
Q ss_pred hcCCCCeEEEcCCCchhhHHH----HHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHH
Q 014492 166 VLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL 241 (423)
Q Consensus 166 l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~ 241 (423)
++++||+|+++.|+|+.+... ++..|++++.+|.+ |++++++++. +++++|++++|+||||.+++.+++.
T Consensus 167 ~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-----d~~~l~~~i~-~~tk~v~l~~p~NptG~v~~l~~i~ 240 (464)
T 1ibj_A 167 LIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTT-----KLDEVAAAIG-PQTKLVWLESPTNPRQQISDIRKIS 240 (464)
T ss_dssp TSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTT-----SHHHHHHHCC-SSEEEEEECSSCTTTCCCCCHHHHH
T ss_pred HhCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCC-----CHHHHHHHhc-cCceEEEEeCCCCCCCEeecHHHHH
Confidence 889999999999999988754 45679999999853 8999999997 6899999999999999999999999
Q ss_pred HHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhccc-CccccccccC-HHHHHHHHHhc--CCCCCcH
Q 014492 242 KILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLA-GLRVGYGAFP-LSIIEYLWRAK--QPYNVSV 316 (423)
Q Consensus 242 ~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~-G~R~G~i~~~-~~~~~~l~~~~--~~~~~~~ 316 (423)
++|+. |+++|+||+|...... ... ..++++++.|+||.++.+ |+|+||++++ +++++.+.... ..++.++
T Consensus 241 ~la~~~gi~livDea~~~g~~~-~~~----~~~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l~~~l~~~~~~~g~~~~~ 315 (464)
T 1ibj_A 241 EMAHAQGALVLVDNSIMSPVLS-RPL----ELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAP 315 (464)
T ss_dssp HHHHTTTCEEEEECTTTCTTTC-CGG----GTTCSEEEEETTTTTTCSSCCCCEEEEECSHHHHHHHHHHHHHTTCBCCH
T ss_pred HHHHHcCCEEEEECCCcccccC-Chh----hcCCEEEEECCcccccCCCCCcEEEEEEChHHHHHHHHHHHHhcCCCCCH
Confidence 99998 9999999999853221 111 146789999999988644 8999999998 47888877655 3467788
Q ss_pred HHHHHHHHHhCChH-HHHHHHHHHHHHHHHHH----------HHHccCCCCeecC----CCceEEEEEeCCCCC-HHHHH
Q 014492 317 AAEVAACAALQNPI-YLEKVKEALIKERERLF----------KLLKDVPFLNPYP----SYSNFILCEVTSGMD-AKKLK 380 (423)
Q Consensus 317 ~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~l~----------~~L~~~~~~~~~p----~~~~~~~~~~~~~~~-~~~l~ 380 (423)
+.+.++.++++... .+++..+......+++. +.|++++.+.+.+ +.+++++++++ +.+ ...+.
T Consensus 316 ~~~~a~~~al~~~~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g~~~~~~l~-~~~~~~~~~ 394 (464)
T 1ibj_A 316 FDCWLCLRGIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITG-SVALSKHLV 394 (464)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECS-CHHHHHHHH
T ss_pred HHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHHhccCCCCceEEEEEEC-CHHHHHHHH
Confidence 88988888887632 22322222222222222 1233333333322 23678999885 322 34577
Q ss_pred HHHHhCCcEEEeCC------------C----------C-CCCCeEEEEecChhhHHHHHHHHhh
Q 014492 381 DDLAKMGVMIRHYN------------N----------K-ELKGYVRVSVGKPEHTDALMECLMH 421 (423)
Q Consensus 381 ~~L~~~gI~v~~~~------------~----------~-~~~~~iRis~~~~~~~~~l~~al~~ 421 (423)
+.|...||.++.|. . . ..++++||+++. ++++++.+.|++
T Consensus 395 ~~L~~~gi~v~~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvg~-edi~~li~~L~~ 457 (464)
T 1ibj_A 395 ETTKYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGI-EDVDDLISDLDI 457 (464)
T ss_dssp HHCSSSEECSCCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTCEEEECCS-SCHHHHHHHHHH
T ss_pred HhcCcceEeecCCCCceeeecccccccccCCHHHHHhcCCCcCeEEEEeCC-CCHHHHHHHHHH
Confidence 77777788887764 1 0 125799999998 667888777765
No 148
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.97 E-value=9.4e-30 Score=252.82 Aligned_cols=314 Identities=16% Similarity=0.139 Sum_probs=217.6
Q ss_pred CCCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-CCCC----CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492 91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (423)
Q Consensus 91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~----~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~ 162 (423)
...++.++|+..+ .++++ ++|++.+++.+ +... ..|+.+...++++.+++++| .++|++++|+++++..+
T Consensus 61 d~~G~~ylD~~~g~~~~~lgh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g--~~~v~~~~sGseA~~~a 138 (433)
T 1z7d_A 61 DVNDKRYYDFLSAYSSVNQGHCHPNILNAMINQAKNLTICSRAFFSVPLGICERYLTNLLG--YDKVLMMNTGAEANETA 138 (433)
T ss_dssp ETTCCEEEESSHHHHTTTTCBTCHHHHHHHHHHHTTCSCCCTTSEEHHHHHHHHHHHHHHT--CSEEEEESSHHHHHHHH
T ss_pred ECCCCEEEEcccchhhcccCCCCHHHHHHHHHHHHhCCCccCCcCCHHHHHHHHHHHhhcC--CCeEEEeCCHHHHHHHH
Confidence 3456788999875 56777 88999999876 2221 23444456789999999998 57999999999999999
Q ss_pred HHHhc---------CCC-CeEEEcCCCchhhHHH-HHHCC------------CeEEEecCCCCCCCCHHHHHHHhhcCCc
Q 014492 163 MRCVL---------DPG-DKIVDCPPTFTMYEFD-AAVNG------------AAVVKVPRKSDFSLNVELIADAVEREKP 219 (423)
Q Consensus 163 ~~~l~---------~~g-d~Vl~~~p~y~~~~~~-~~~~g------------~~~~~v~~~~~~~~d~~~l~~~i~~~~~ 219 (423)
++.+. .+| |.|++.+|+|+.+... ....| ..++.+|. .|++++++.++.+++
T Consensus 139 l~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-----~d~~~le~~l~~~~~ 213 (433)
T 1z7d_A 139 YKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPY-----DDLEALEEELKDPNV 213 (433)
T ss_dssp HHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECT-----TCHHHHHHHHTSTTE
T ss_pred HHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCC-----CCHHHHHHHhCCCCE
Confidence 98653 467 9999999999865432 23333 34555553 389999999953678
Q ss_pred eEEEEcCCCCCcCcCC----CHHHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEEEccChhhhcccC-cc
Q 014492 220 KCIFLTSPNNPDGSII----NDEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAG-LR 291 (423)
Q Consensus 220 ~~i~l~~p~NPtG~~~----~~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~g~~G-~R 291 (423)
++|+++..+|++|.+. ..+++.++|+. |++||+||+|.+|...+.. ....+...+++ ||||.+| +| +|
T Consensus 214 ~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~~~~~~~~~~~di~---t~sK~l~-~G~~~ 289 (433)
T 1z7d_A 214 CAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNVKPDVI---LLGKALS-GGHYP 289 (433)
T ss_dssp EEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE---EECGGGG-TTSSC
T ss_pred EEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcchhhHhcCCCCCEE---EECcccc-CCCCC
Confidence 8877766678899865 44556666665 9999999999877543322 12222233333 8899999 89 99
Q ss_pred ccccccCHHHHHHHHHh--cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccC----CCCeecCCCceE
Q 014492 292 VGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDV----PFLNPYPSYSNF 365 (423)
Q Consensus 292 ~G~i~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~p~~~~~ 365 (423)
+||+++++++++.+... ...|+.+++++.++.++|+..+. ++..++++++++++.+.|+++ +.+...++.|+|
T Consensus 290 ~G~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~g~~ 368 (433)
T 1z7d_A 290 ISAVLANDDIMLVIKPGEHGSTYGGNPLAASICVEALNVLIN-EKLCENAEKLGGPFLENLKRELKDSKIVRDVRGKGLL 368 (433)
T ss_dssp CEEEEECHHHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEETTE
T ss_pred eEEEEECHHHHhhhccccccccCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeeeeE
Confidence 99999999988776542 23467889999888888864221 245666777777777777654 332334567889
Q ss_pred EEEEeCCC-CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014492 366 ILCEVTSG-MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM 420 (423)
Q Consensus 366 ~~~~~~~~-~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~ 420 (423)
+++++++. .+..++.+.|.++||.+.++. .+++||+++ +.++++++.++|+
T Consensus 369 ~~i~~~~~~~~~~~~~~~l~~~Gv~v~~~~----~~~iRi~~~~~~t~e~i~~~l~~l~ 423 (433)
T 1z7d_A 369 CAIEFKNELVNVLDICLKLKENGLITRDVH----DKTIRLTPPLCITKEQLDECTEIIV 423 (433)
T ss_dssp EEEEECTTTCCHHHHHHHHHHTTEECCEET----TTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred EEEEEccChhHHHHHHHHHHHCCeEEecCC----CCEEEEECCcCCCHHHHHHHHHHHH
Confidence 99999753 468899999999999999863 579999875 4445555555444
No 149
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.97 E-value=5.4e-30 Score=256.52 Aligned_cols=320 Identities=13% Similarity=0.112 Sum_probs=225.6
Q ss_pred CCCCCeeEcCCC--CCCCCC-CHHHHHHHhc-C---C--CC-CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492 92 RKPEDIVKIDAN--ENPYGP-PPEVREALGQ-L---K--FP-YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (423)
Q Consensus 92 ~~~~~~i~l~~~--~~~~~~-~~~v~~al~~-~---~--~~-~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~ 161 (423)
..++.++|+..| .+.++. +|++.+|+.+ + . +. .+|+++...++++.++++++.+.++|++|+|+++++..
T Consensus 47 ~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~ggseA~~~ 126 (459)
T 4a6r_A 47 SEGNKIIDGMAGLWCVNVGYGRKDFAEAARRQMEELPFYNTFFKTTHPAVVELSSLLAEVTPAGFDRVFYTNSGSESVDT 126 (459)
T ss_dssp TTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCSCCCTTSSSCCHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHH
T ss_pred CCCCEEEECCCchhcccCCCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHH
Confidence 456789999887 666764 5889888865 2 2 11 13455556789999999998888999999999999999
Q ss_pred HHHHhcC--------CCCeEEEcCCCchhhHHHHHHCCC-------------eEEEecCCC-----CCCCC--------H
Q 014492 162 IMRCVLD--------PGDKIVDCPPTFTMYEFDAAVNGA-------------AVVKVPRKS-----DFSLN--------V 207 (423)
Q Consensus 162 ~~~~l~~--------~gd~Vl~~~p~y~~~~~~~~~~g~-------------~~~~v~~~~-----~~~~d--------~ 207 (423)
+++.++. +++.|++..|+|+.+...+...+. .+..++.+. ++ .| +
T Consensus 127 al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~~~~ 205 (459)
T 4a6r_A 127 MIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGVVAA 205 (459)
T ss_dssp HHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHHHHH
Confidence 9998875 468999999999877655544322 233344221 12 45 7
Q ss_pred HHHHHHhhc---CCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEE
Q 014492 208 ELIADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIV 277 (423)
Q Consensus 208 ~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~ 277 (423)
++|++.+.+ .++++|+++.++|++|.+.+ .+++.++|+. |++||+||+|.+|...+.. ....+..++++
T Consensus 206 ~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~~pdi~- 284 (459)
T 4a6r_A 206 RWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWFGHQHFGFQPDLF- 284 (459)
T ss_dssp HHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE-
T ss_pred HHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCee-
Confidence 888888863 34566666566677777664 5556666665 9999999999988654321 22233333433
Q ss_pred EccChhhhcccCccccccccCHHHHHHHHH-----hcCCCCCcHHHHHHHHHHhCC---hHHHHHHH-HHHHHHHHHHHH
Q 014492 278 LRTFSKRAGLAGLRVGYGAFPLSIIEYLWR-----AKQPYNVSVAAEVAACAALQN---PIYLEKVK-EALIKERERLFK 348 (423)
Q Consensus 278 i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~-----~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~-~~~~~~~~~l~~ 348 (423)
+|||.++.+|+|+||+++++++++.+.. ....|+.+++++.++.++|+. +++.++.+ +.....++.|.+
T Consensus 285 --t~sK~l~gg~~~lg~v~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~~l~~ 362 (459)
T 4a6r_A 285 --TAAKGLSSGYLPIGAVFVGKRVAEGLIAGGDFNHGFTYSGHPVCAAVAHANVAALRDEGIVQRVKDDIGPYMQKRWRE 362 (459)
T ss_dssp --EECGGGGTTSSCCEEEEECHHHHHHHHHHCTTHHHHHHCSCHHHHHHHHHHHHHHHHTCHHHHHHHTHHHHHHHHHHH
T ss_pred --ehhhhhcCCCCCccceeeCHHHHHHhhcCCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 5789988555999999999999998872 223478899999999999873 34555555 555666666666
Q ss_pred HHccCCCCeecCCCceEEEEEeCCCCC-----------HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHH
Q 014492 349 LLKDVPFLNPYPSYSNFILCEVTSGMD-----------AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDA 414 (423)
Q Consensus 349 ~L~~~~~~~~~p~~~~~~~~~~~~~~~-----------~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~ 414 (423)
.|++++.+...++.|+|+++++.+... ..++.+.|+++||.+++++ +++||++. +.+++++
T Consensus 363 ~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-----~~iRi~~~~~~t~e~i~~ 437 (459)
T 4a6r_A 363 TFSRFEHVDDVRGVGMVQAFTLVKNKAKRELFPDFGEIGTLCRDIFFRNNLIMRACG-----DHIVSAPPLVMTRAEVDE 437 (459)
T ss_dssp HHTTCTTEEEEEEETTEEEEEECSBTTTTBCCSSTTHHHHHHHHHHHHTTEECEEET-----TEEEECCCTTCCHHHHHH
T ss_pred HHhcCCCeEEEEEEEEEEEEEEecCccccccccchHHHHHHHHHHHHHCCeEEecCC-----CEEEEECCCCCCHHHHHH
Confidence 677676665566778899988863211 6778899999999999874 79999944 4555555
Q ss_pred HHHHHh
Q 014492 415 LMECLM 420 (423)
Q Consensus 415 l~~al~ 420 (423)
+.++|+
T Consensus 438 ~l~~l~ 443 (459)
T 4a6r_A 438 MLAVAE 443 (459)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 554444
No 150
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.97 E-value=5.4e-29 Score=248.93 Aligned_cols=314 Identities=12% Similarity=0.099 Sum_probs=218.5
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhcCCCCCCC-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeE
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQLKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKI 173 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~V 173 (423)
..++|+..+.++.+.++.+.+++.... ..| ++++..+||++++++++. +++++++|+++++..++++++++||
T Consensus 42 ~~ylD~~~~~~~~~~~~~~~~a~~~~~--~~y~~~~~~~~l~~~la~~~~~--~~~~~~~~gt~a~~~al~~l~~~gd-- 115 (456)
T 2ez2_A 42 DIYIDLLTDSGTNAMSDKQWAGMMMGD--EAYAGSENFYHLERTVQELFGF--KHIVPTHQGRGAENLLSQLAIKPGQ-- 115 (456)
T ss_dssp GCSEECSCSSSCCCCCHHHHHHHTTCC--CCSSSCHHHHHHHHHHHHHHCC--SEEEEESSHHHHHHHHHHHHCCTTC--
T ss_pred cceeeeccccCCccCCHHHHHHhhcch--hhcccChhHHHHHHHHHHHhCC--CcEEEeCCcHHHHHHHHHHhCCCCC--
Confidence 456888888877777888888887422 345 556788999999999986 4899999999999999999999999
Q ss_pred EEcCCCc-hhhHHHHHHCCCeEEEecCCC----------CCCCCHHHHHHHhhcC---CceEEEEcCCCC-CcCcCCCHH
Q 014492 174 VDCPPTF-TMYEFDAAVNGAAVVKVPRKS----------DFSLNVELIADAVERE---KPKCIFLTSPNN-PDGSIINDE 238 (423)
Q Consensus 174 l~~~p~y-~~~~~~~~~~g~~~~~v~~~~----------~~~~d~~~l~~~i~~~---~~~~i~l~~p~N-PtG~~~~~~ 238 (423)
+++.|+| ..+...++..|++++.++.+. ++.+|+++|++++.+. ++++|++++|+| |||.+++.+
T Consensus 116 i~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~~~~~~ 195 (456)
T 2ez2_A 116 YVAGNMYFTTTRYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMA 195 (456)
T ss_dssp EEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHH
T ss_pred EeccccccchhHHHHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHhccccceeEEEEeccCCCCCCccCCHH
Confidence 7888999 787888889999999998652 3688999999999632 248999999999 999999965
Q ss_pred HHHHHH---cC-CCEEEEccCCcc----------ccCCCchhh----hhccCCcEEEEccChhhhcccCcccccccc-CH
Q 014492 239 DLLKIL---EM-PILVVLDEAYTE----------FSGLESRME----WVKKHDNLIVLRTFSKRAGLAGLRVGYGAF-PL 299 (423)
Q Consensus 239 ~l~~i~---~~-~~~li~Deay~~----------~~~~~~~~~----~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~-~~ 299 (423)
++++|+ +. |++||+||+|.. +.+.+.... ......+++++ |++|.+ .+| |.||+++ ++
T Consensus 196 ~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~-S~kk~~-~~~-~gG~~~~~~~ 272 (456)
T 2ez2_A 196 NMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTM-SGKKDC-LVN-IGGFLCMNDD 272 (456)
T ss_dssp HHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEE-ETTTTT-CCS-SCEEEEESCH
T ss_pred HHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEEE-eCcccC-CCC-ceeEEEECCH
Confidence 555554 43 999999999986 233332211 12233455555 778854 467 7899998 68
Q ss_pred HHHHHHHHhcC-------CCCCcHHHHHH-HHHHhCChHHH-HHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEe
Q 014492 300 SIIEYLWRAKQ-------PYNVSVAAEVA-ACAALQNPIYL-EKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEV 370 (423)
Q Consensus 300 ~~~~~l~~~~~-------~~~~~~~~~~a-~~~~l~~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~ 370 (423)
++++.+..... ..+.+.....+ +...+ +.+ ++..++.+++.+++.+.|++.+...+.|.+++|+|+++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p~~~~~~~~~~ 349 (456)
T 2ez2_A 273 EMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLR---EAMQYEYIEHRVKQVRYLGDKLKAAGVPIVEPVGGHAVFLDA 349 (456)
T ss_dssp HHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHH---HHTCHHHHHHHHHHHHHHHHHHHHTTCCBCSSCCSSEEEEEH
T ss_pred HHHHHHHHHHhhccCcccccCcchhHHHHHHHHHH---HHhHHHHHHHHHHHHHHHHHHHhcCCCccccCCCceEEEEEh
Confidence 88887765432 12234333333 33333 222 34455556667778888877643234577889999987
Q ss_pred C---CCCCHHHH-----HHHH-HhCCcEEEeCCC-------------CCCCCeEEEEec----ChhhHHHHHHHHh
Q 014492 371 T---SGMDAKKL-----KDDL-AKMGVMIRHYNN-------------KELKGYVRVSVG----KPEHTDALMECLM 420 (423)
Q Consensus 371 ~---~~~~~~~l-----~~~L-~~~gI~v~~~~~-------------~~~~~~iRis~~----~~~~~~~l~~al~ 420 (423)
+ .+.+..++ .+.| .++||.+.+.+. ....+++||+++ +.++++++.++|+
T Consensus 350 ~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~iRis~~~~~~t~e~i~~~~~~l~ 425 (456)
T 2ez2_A 350 RRFCEHLTQDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTIPRRVYTYAHMDVVADGII 425 (456)
T ss_dssp HHHTTTSCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTTCCHHHHHHHHHHHH
T ss_pred HHhcCCCChhhccHHHHHHHHHHhcCeeeecccccccccCccccccccCCCCeEEEEeCCCCCCHHHHHHHHHHHH
Confidence 3 24444555 7777 588998755221 123479999987 3444455544444
No 151
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.97 E-value=8.4e-29 Score=242.27 Aligned_cols=281 Identities=17% Similarity=0.172 Sum_probs=216.1
Q ss_pred CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHH----HHHHCCCeEEEecC
Q 014492 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPR 199 (423)
Q Consensus 124 ~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~ 199 (423)
.+|++++..+++++++++++.+ +.|++++| ++++..+++.++++||+|+++.|+|..... .++..|++++.++.
T Consensus 47 ~~~~~~~~~~l~~~la~~~~~~-~~i~~~sG-t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 124 (386)
T 1cs1_A 47 SRRGNPTRDVVQRALAELEGGA-GAVLTNTG-MSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQ 124 (386)
T ss_dssp TTTCCHHHHHHHHHHHHHHTCS-EEEEESSH-HHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEECT
T ss_pred eCCCCccHHHHHHHHHHHhCCC-cEEEeCCH-HHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEEeCC
Confidence 4567788899999999999976 67777776 899999999999999999999999986333 34668999999985
Q ss_pred CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEE
Q 014492 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (423)
Q Consensus 200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i 278 (423)
+ |++++++.++ +++++|++++|+||||.+++.+++.++|+. |+++|+||+|..+.... .. ..+.++++
T Consensus 125 ~-----d~~~l~~~i~-~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~-~~----~~~~di~~ 193 (386)
T 1cs1_A 125 G-----DEQALRAALA-EKPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQN-PL----ALGADLVL 193 (386)
T ss_dssp T-----CHHHHHHHHH-TCCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCC-GG----GGTCSEEE
T ss_pred C-----CHHHHHHhhc-cCCcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCC-cc----ccCceEEE
Confidence 2 8999999997 689999999999999999999999999987 99999999999876532 11 24567999
Q ss_pred ccChhhhcccCccc-cccccCH-HHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC
Q 014492 279 RTFSKRAGLAGLRV-GYGAFPL-SIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP 354 (423)
Q Consensus 279 ~S~SK~~g~~G~R~-G~i~~~~-~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 354 (423)
.|+||.++.+|.|+ ||+++++ ++++.+...... ++.++..+.++...++ ++....+++.++++.+.+.|++++
T Consensus 194 ~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~l~~~l~~~~ 270 (386)
T 1cs1_A 194 HSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLR---TLVPRMELAQRNAQAIVKYLQTQP 270 (386)
T ss_dssp EETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHTCBCCHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHTTCT
T ss_pred EcCcccccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999899997 9999976 788877765443 4577887777766664 345566677788888888888765
Q ss_pred CCe-e-cC----------------CCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC--------------------
Q 014492 355 FLN-P-YP----------------SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK-------------------- 396 (423)
Q Consensus 355 ~~~-~-~p----------------~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~-------------------- 396 (423)
.+. . .+ ..++++.+.+++ ..+.+.+.|.++||.++..+..
T Consensus 271 ~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~gi~~~~~~~g~~~sl~~~~~~~~~~~~~~~ 348 (386)
T 1cs1_A 271 LVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG--DEQTLRRFLGGLSLFTLAESLGGVESLISHAATMTHAGMAPE 348 (386)
T ss_dssp TEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS--CHHHHHHHHHTCSSSEEBSCCCSSSCEEEEGGGTTTTTSCHH
T ss_pred CeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECC--CHHHHHHHHHhCCcceEcccCCCcceeeecccccccccCCHH
Confidence 432 1 12 237788888863 2677888888999999842110
Q ss_pred ------CCCCeEEEEecC---hhhHHHHHHHHhhh
Q 014492 397 ------ELKGYVRVSVGK---PEHTDALMECLMHL 422 (423)
Q Consensus 397 ------~~~~~iRis~~~---~~~~~~l~~al~~l 422 (423)
..++++||+++. .++.+.|.++++.+
T Consensus 349 ~~~~~g~~~~~iRis~~~~~~~~~i~~l~~al~~~ 383 (386)
T 1cs1_A 349 ARAAAGISETLLRISTGIEDGEDLIADLENGFRAA 383 (386)
T ss_dssp HHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 125899999986 33445555555543
No 152
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.97 E-value=8.1e-30 Score=254.48 Aligned_cols=319 Identities=16% Similarity=0.151 Sum_probs=223.9
Q ss_pred CCCCCeeEcCCCC--CCCCC-CHHHHHHHhc-CCCC----C-CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492 92 RKPEDIVKIDANE--NPYGP-PPEVREALGQ-LKFP----Y-IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (423)
Q Consensus 92 ~~~~~~i~l~~~~--~~~~~-~~~v~~al~~-~~~~----~-~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~ 162 (423)
..+..++|+..+. ++++. +|++.+++.+ +... . .|+.....++++.++++++.++++|++|+|++++++.+
T Consensus 47 ~~g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggsea~~~a 126 (449)
T 3a8u_X 47 DKGRKVYDSLSGLWTCGAGHTRKEIQEAVAKQLSTLDYSPGFQYGHPLSFQLAEKITDLTPGNLNHVFFTDSGSECALTA 126 (449)
T ss_dssp TTCCEEEETTHHHHTCTTCBSCHHHHHHHHHHTTTCSCCCSSSCCCHHHHHHHHHHHTTSSTTEEEEEEESSHHHHHHHH
T ss_pred CCCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHH
Confidence 3456788987664 55654 7999999876 3221 1 45555567899999999988888999999999999999
Q ss_pred HHHhcC--------CCCeEEEcCCCchhhHH-HHHHCCC------------eEEEecCCCCC-----CCC--------HH
Q 014492 163 MRCVLD--------PGDKIVDCPPTFTMYEF-DAAVNGA------------AVVKVPRKSDF-----SLN--------VE 208 (423)
Q Consensus 163 ~~~l~~--------~gd~Vl~~~p~y~~~~~-~~~~~g~------------~~~~v~~~~~~-----~~d--------~~ 208 (423)
++.+.. +||+|++.+|+|+.+.. .....|. .+..++.+..+ ++| ++
T Consensus 127 l~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~ 206 (449)
T 3a8u_X 127 VKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALAD 206 (449)
T ss_dssp HHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHH
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHHHHHHH
Confidence 987764 67999999999986543 3444331 23444432211 256 99
Q ss_pred HHHHHhhc---CCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCc--hhhhhccCCcEEEE
Q 014492 209 LIADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVL 278 (423)
Q Consensus 209 ~l~~~i~~---~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~i 278 (423)
+|++.+++ .++++|+++..+|+||.+.+ .+++.++|+. |++||+||+|.+|...+. .....+..++++
T Consensus 207 ~le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~di~-- 284 (449)
T 3a8u_X 207 ELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFGVTPDLM-- 284 (449)
T ss_dssp HHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--
T ss_pred HHHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcchhhhhcCCCCCEE--
Confidence 99999863 35666665544678998777 7777778877 999999999987754332 223333333433
Q ss_pred ccChhhhcccC-ccccccccCHHHHHHHHHh-----------cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Q 014492 279 RTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA-----------KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERL 346 (423)
Q Consensus 279 ~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~~-----------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l 346 (423)
|+||.++ +| +|+||+++++++++.+... ...++.+++++.++.++|+..+. +...++++++++++
T Consensus 285 -s~sK~l~-~G~~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~-~~~~~~~~~~~~~l 361 (449)
T 3a8u_X 285 -CIAKQVT-NGAIPMGAVIASTEIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLLQK-ENLVQSVAEVAPHF 361 (449)
T ss_dssp -EECGGGG-TTSSCCEEEEEEHHHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHH
T ss_pred -EEccccc-CCCCceEEEEECHHHHHHhhccCcccccccccccCCCcccHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHH
Confidence 8899998 57 9999999999999888763 12366788999888888864211 24567778888888
Q ss_pred HHHHccCC---CCeecCCCceEEEEEeCCCC-----CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHH
Q 014492 347 FKLLKDVP---FLNPYPSYSNFILCEVTSGM-----DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDAL 415 (423)
Q Consensus 347 ~~~L~~~~---~~~~~p~~~~~~~~~~~~~~-----~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l 415 (423)
.+.|++++ .+...++.|+|+|+++++.. +..++.+.|.++||.+++++ +++||++. +.++++++
T Consensus 362 ~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-----~~iRis~~~~~t~~~i~~~ 436 (449)
T 3a8u_X 362 EKALHGIKGAKNVIDIRNFGLAGAIQIAPRDGDAIVRPFEAGMALWKAGFYVRFGG-----DTLQFGPTFNSKPQDLDRL 436 (449)
T ss_dssp HHHHHTTTTSTTEEEEEEETTEEEEEECCBTTBSSHHHHHHHHHHHHHTEECEEET-----TEEEECCCTTCCHHHHHHH
T ss_pred HHHHHHHhcCCCeEEEeeeEEEEEEEEecCcccccccHHHHHHHHHHCCcEEecCC-----CEEEEECCCcCCHHHHHHH
Confidence 88887643 22223567889999997432 22378899988999999873 79999954 45555555
Q ss_pred HHHHh
Q 014492 416 MECLM 420 (423)
Q Consensus 416 ~~al~ 420 (423)
.++|+
T Consensus 437 l~~l~ 441 (449)
T 3a8u_X 437 FDAVG 441 (449)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55544
No 153
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.97 E-value=3.2e-29 Score=249.40 Aligned_cols=314 Identities=13% Similarity=0.066 Sum_probs=227.5
Q ss_pred CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCCC----CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (423)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~----~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~ 162 (423)
...++.++||..|. ++++ .+|++.+++.+ +... ..|+.+...++++.+++++| .++|++++|+++++..+
T Consensus 72 d~~g~~ylD~~sg~~~~~lgh~~p~v~~Ai~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g--~~~v~~~~sGseA~~~a 149 (439)
T 2oat_A 72 DVEGRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLTLTSRAFYNNVLGEYEEYITKLFN--YHKVLPMNTGVEAGETA 149 (439)
T ss_dssp ETTCCEEEESSGGGGTTTTCBTCHHHHHHHHHHHTTCSCCCTTSEESSHHHHHHHHHHHHT--CSEEEEESSHHHHHHHH
T ss_pred ECCCCEEEEccCCcccccCCCCCHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHHHhcC--CCEEEEeCCHHHHHHHH
Confidence 34567899998864 4666 88999999876 2221 23444557899999999997 57999999999999999
Q ss_pred HHHhc---------CCC-CeEEEcCCCchhhHH-HHHHCC------------CeEEEecCCCCCCCCHHHHHHHhhcCCc
Q 014492 163 MRCVL---------DPG-DKIVDCPPTFTMYEF-DAAVNG------------AAVVKVPRKSDFSLNVELIADAVEREKP 219 (423)
Q Consensus 163 ~~~l~---------~~g-d~Vl~~~p~y~~~~~-~~~~~g------------~~~~~v~~~~~~~~d~~~l~~~i~~~~~ 219 (423)
++.+. .+| |.|++.+|+|+.+.. .....| ..++.+|. .|++++++.++.+++
T Consensus 150 l~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-----~d~~~le~~l~~~~~ 224 (439)
T 2oat_A 150 CKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPY-----NDLPALERALQDPNV 224 (439)
T ss_dssp HHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECS-----SCHHHHHHHTTSTTE
T ss_pred HHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCC-----CCHHHHHHHhCCCCE
Confidence 98764 357 899999999976543 333334 45666663 389999999953577
Q ss_pred eEEEEcCCCCCcCcCC----CHHHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEEEccChhhhcccC-cc
Q 014492 220 KCIFLTSPNNPDGSII----NDEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAG-LR 291 (423)
Q Consensus 220 ~~i~l~~p~NPtG~~~----~~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~g~~G-~R 291 (423)
++|+++..+|++|.+. ..+++.++|+. |+++|+||+|.+|...+.. ....+...+++ |+||.++ +| +|
T Consensus 225 ~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~~~~~~~~~~Di~---t~sK~l~-~G~~~ 300 (439)
T 2oat_A 225 AAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVRPDIV---LLGKALS-GGLYP 300 (439)
T ss_dssp EEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE---EECGGGG-TTSSC
T ss_pred EEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcchhHHHhCCCCcEE---Eeccccc-CCCCC
Confidence 7777766678899765 45566666665 9999999999877543322 12222223333 8999998 68 99
Q ss_pred ccccccCHHHHHHHHHh--cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCC--eecCCCceEEE
Q 014492 292 VGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFL--NPYPSYSNFIL 367 (423)
Q Consensus 292 ~G~i~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~--~~~p~~~~~~~ 367 (423)
+||+++++++++.+... ...|+.+++++.++.++|+..+. ++..++++++++++.+.|++++.. ...++.|+|++
T Consensus 301 ~G~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~g~~~~ 379 (439)
T 2oat_A 301 VSAVLCDDDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEE-ENLAENADKLGIILRNELMKLPSDVVTAVRGKGLLNA 379 (439)
T ss_dssp CEEEEECHHHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHTTSCTTTEEEEEEETTEEE
T ss_pred eEEEEECHHHHhccCCCCcccCCCcCHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeeeEEE
Confidence 99999999988776542 23467889999888888864221 356778888999999999886421 12356788999
Q ss_pred EEeCCC--CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014492 368 CEVTSG--MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM 420 (423)
Q Consensus 368 ~~~~~~--~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~ 420 (423)
+++++. .+..++.+.|.++||.+.++. ++++||+++ +.++++++.++|+
T Consensus 380 v~l~~~~~~~~~~l~~~l~~~Gv~v~~~~----~~~iRi~~~~~~t~e~i~~~l~~l~ 433 (439)
T 2oat_A 380 IVIKETKDWDAWKVCLRLRDNGLLAKPTH----GDIIRFAPPLVIKEDELRESIEIIN 433 (439)
T ss_dssp EEECCCSSCCHHHHHHHHHHTTEECCBSS----SSEEEECCCTTCCHHHHHHHHHHHH
T ss_pred EEEecCccHHHHHHHHHHHHCCeEEecCC----CCEEEEECccCCCHHHHHHHHHHHH
Confidence 999754 468899999999999999853 589999875 4444555554444
No 154
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.97 E-value=4e-30 Score=250.58 Aligned_cols=308 Identities=13% Similarity=0.080 Sum_probs=212.7
Q ss_pred CCC-CeeEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHhCCC-CCcEEEeCCHHHHHHHHHHHhcCCC
Q 014492 93 KPE-DIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLE-SDHILVGCGADELIDLIMRCVLDPG 170 (423)
Q Consensus 93 ~~~-~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y~~~g~~~lr~~ia~~~g~~-~~~i~~t~G~~~al~~~~~~l~~~g 170 (423)
.+. +++++..+.++.+.++++++++.. +..|..-...+++.+++++|.+ ++++++++|+++++..++.++ +|
T Consensus 25 ~g~~~v~~~~~~~~~~~~~~~v~~a~~~----~~~~~~~~~~~~~~~a~~~g~~~~~~~~~~~ggt~a~~~~~~~~--~g 98 (374)
T 2aeu_A 25 KGRDALYDLSGLSGGFLIDEKDKALLNT----YIGSSYFAEKVNEYGLKHLGGDENDKCVGFNRTSSAILATILAL--KP 98 (374)
T ss_dssp TCGGGCEECSSCCCCCCCCHHHHHHHTS----TTHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHH--CC
T ss_pred cCccceeeecccCCCCCCCHHHHHHHHH----hcCchHHHHHHHHHHHHHhCCCCcceEEEEcChHHHHHHHHHhC--CC
Confidence 344 689999988889999999999972 1112111346777777888973 478999999999999999977 99
Q ss_pred CeEEEcCCCchhhHH---HHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceE-EEEcCCCCCcC-cCCCHHHHHHHHc
Q 014492 171 DKIVDCPPTFTMYEF---DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKC-IFLTSPNNPDG-SIINDEDLLKILE 245 (423)
Q Consensus 171 d~Vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~-i~l~~p~NPtG-~~~~~~~l~~i~~ 245 (423)
|+|+++.|+|+.+.. .++..|++++.+ .|++++++. . +++++ |++++|||||| ...+.+++.++|+
T Consensus 99 d~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v-------~d~~~l~~~-~-~~~~~~v~~~~p~nptG~~~~~l~~i~~l~~ 169 (374)
T 2aeu_A 99 KKVIHYLPELPGHPSIERSCKIVNAKYFES-------DKVGEILNK-I-DKDTLVIITGSTMDLKVIELENFKKVINTAK 169 (374)
T ss_dssp SEEEEECSSSSCCTHHHHHHHHTTCEEEEE-------SCHHHHHTT-C-CTTEEEEEECBCTTSCBCCHHHHHHHHHHHH
T ss_pred CEEEEecCCCCccHHHHHHHHHcCcEEEEe-------CCHHHHHhc-C-CCccEEEEEccCCCCCCCCcccHHHHHHHHH
Confidence 999999998864332 567789999888 389999988 4 78999 99999999999 6666677777777
Q ss_pred C-CCEEEEccCCccccC---CC-chhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC--CCCcHHH
Q 014492 246 M-PILVVLDEAYTEFSG---LE-SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAA 318 (423)
Q Consensus 246 ~-~~~li~Deay~~~~~---~~-~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~--~~~~~~~ 318 (423)
. |+++|+||+|..+.. .. +... .+.+++++|+||. ++|+|+||+++++++++++...... .+++++.
T Consensus 170 ~~~~~li~De~~~~~~~~~~~~~~~~~----~~~di~~~S~sK~--l~g~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~ 243 (374)
T 2aeu_A 170 NKEAIVFVDDASGARVRLLFNQPPALK----LGADLVVTSTDKL--MEGPRGGLLAGKKELVDKIYIEGTKFGLEAQPPL 243 (374)
T ss_dssp HHTCCEEEECTTHHHHHHHTTCCCHHH----HTCSEEEEETTSS--SSSCSCEEEEEEHHHHHHHHHHHHTTTCBCCHHH
T ss_pred HcCCEEEEECCcccccccccccCCccc----cCCcEEEecCccc--ccCcceEEEEECHHHHHHHHHhhccccCCCCHHH
Confidence 6 999999999987641 11 1111 2345889999997 4688999999999999988876544 3578888
Q ss_pred HHHHHHHhCChH--HHHHHHHHHHHH----HHHHHHHHccC---CCCeec-CCCceE-EEEEeCCCCC---HHHHHHHHH
Q 014492 319 EVAACAALQNPI--YLEKVKEALIKE----RERLFKLLKDV---PFLNPY-PSYSNF-ILCEVTSGMD---AKKLKDDLA 384 (423)
Q Consensus 319 ~~a~~~~l~~~~--~~~~~~~~~~~~----~~~l~~~L~~~---~~~~~~-p~~~~~-~~~~~~~~~~---~~~l~~~L~ 384 (423)
+.++..+++... .+++..+..+.. ++.+.+.|..+ .++.+. +..+.+ .|.+.++..+ ..+++..++
T Consensus 244 ~~a~~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ll 323 (374)
T 2aeu_A 244 LAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFVIKRVYKDDTINIKKLIEIGFNLL 323 (374)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeCCceEEEEeecccccccccchHHHHHHHH
Confidence 888888876421 222222222222 45666666554 122322 233333 3444431111 122555554
Q ss_pred -hCCcEEEeCCC-CCCCCeEEEEecChh----hHHHHHHHHhh
Q 014492 385 -KMGVMIRHYNN-KELKGYVRVSVGKPE----HTDALMECLMH 421 (423)
Q Consensus 385 -~~gI~v~~~~~-~~~~~~iRis~~~~~----~~~~l~~al~~ 421 (423)
++||.++++.. +..++++||+++..+ +.+++.++++.
T Consensus 324 ~~~gV~v~~g~~~~~~~~~lRi~~~~~~~~~~~l~~l~~~l~~ 366 (374)
T 2aeu_A 324 KNYGIITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVE 366 (374)
T ss_dssp HHHCEECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHH
T ss_pred HhCCEEEecCCCCCCCCCeEEEEcCCchHHHHHHHHHHHHHHH
Confidence 78999998765 345679999997533 24566665543
No 155
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.97 E-value=3.2e-30 Score=255.94 Aligned_cols=317 Identities=15% Similarity=0.108 Sum_probs=223.8
Q ss_pred CCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CC--CCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHH
Q 014492 92 RKPEDIVKIDANE--NPYG-PPPEVREALGQ-LK--FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC 165 (423)
Q Consensus 92 ~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~--~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~ 165 (423)
..+++++|+..+. +.++ .+|++.+|+.+ +. ...+||++...+|+++++++++ .+++|++++|+++++..+++.
T Consensus 50 ~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~l~~~la~~~~-~~~~v~~~~~Gsea~~~ai~~ 128 (429)
T 3k28_A 50 IDGNEYIDYVLSWGPLIHGHANDRVVEALKAVAERGTSFGAPTEIENKLAKLVIERVP-SIEIVRMVNSGTEATMSALRL 128 (429)
T ss_dssp TTCCEEEESCGGGTTCTTCBSCHHHHHHHHHHHHHCSCCSSCCHHHHHHHHHHHHHST-TCSEEEEESSHHHHHHHHHHH
T ss_pred CCCCEEEECCCChhhcccCCCCHHHHHHHHHHHhhCcCcCCCCHHHHHHHHHHHHhCC-CCCEEEEeCChHHHHHHHHHH
Confidence 4577899998874 6677 48999998876 22 1245788788899999999997 678999999999999999987
Q ss_pred hcC--CCCeEEEcCCCchhhHHHHHH-CCCeE--EEecCCCCCC------------CCHHHHHHHhhc--CCceEEEEcC
Q 014492 166 VLD--PGDKIVDCPPTFTMYEFDAAV-NGAAV--VKVPRKSDFS------------LNVELIADAVER--EKPKCIFLTS 226 (423)
Q Consensus 166 l~~--~gd~Vl~~~p~y~~~~~~~~~-~g~~~--~~v~~~~~~~------------~d~~~l~~~i~~--~~~~~i~l~~ 226 (423)
+.. +++.|++.+|+|+.+...+.. .|..+ ..+|...+.. -|++++++.+.+ .++++|+++.
T Consensus 129 a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep 208 (429)
T 3k28_A 129 ARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFGDDIACVIVEP 208 (429)
T ss_dssp HHHHHTCCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEEEEECS
T ss_pred HHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCCCCEEEEEEcC
Confidence 653 568899999999754433222 22211 1122111110 189999998863 3566777666
Q ss_pred CCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEEEccChhhhcccCccccccccCH
Q 014492 227 PNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299 (423)
Q Consensus 227 p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~ 299 (423)
++|++|.+.+ .+++.++|+. |++||+||+|.+| ..+.. ....+.... +.||||.++ +|+|+||+++++
T Consensus 209 ~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~~~d---i~t~sK~~~-~G~~iG~~~~~~ 283 (429)
T 3k28_A 209 VAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAYNCGQGYYGVTPD---LTCLGKVIG-GGLPVGAYGGKA 283 (429)
T ss_dssp SBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSSTTHHHHHHTCCCS---EEEECGGGG-TTSCCEEEEECH
T ss_pred CCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcchHHHHhCCCCc---eehhhhhhc-CCCCeEEEEEcH
Confidence 6777888887 6777777776 9999999999988 43321 122222233 346899998 699999999999
Q ss_pred HHHHHHHHh-----cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc----CCCCeecCCCceEEEEEe
Q 014492 300 SIIEYLWRA-----KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKD----VPFLNPYPSYSNFILCEV 370 (423)
Q Consensus 300 ~~~~~l~~~-----~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~p~~~~~~~~~~ 370 (423)
++++.+... ..+++.+++++.++.++|+..+ ++..++++++++++.+.|++ .+.+...++.|+|+++.+
T Consensus 284 ~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~ 361 (429)
T 3k28_A 284 EIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLT--PESYVEFERKAEMLEAGLRKAAEKHGIPHHINRAGSMIGIFF 361 (429)
T ss_dssp HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCC--HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEES
T ss_pred HHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhhCCCCEEEEeeccEEEEEE
Confidence 998877652 2357889999999999998644 56777777777777777765 354444567788888887
Q ss_pred CCC-------------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHh
Q 014492 371 TSG-------------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLM 420 (423)
Q Consensus 371 ~~~-------------~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~ 420 (423)
.+. ....++++.|.++||.+++++ .+.+|+++. +.++++++.++|+
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~----~~~~r~~~~~t~e~i~~~l~~l~ 421 (429)
T 3k28_A 362 TDEPVINYDAAKSSNLQFFAAYYREMVEQGVFLPPSQ----FEGLFLSTVHSDADIEATIAAAE 421 (429)
T ss_dssp SSSCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCSST----TSCBCCCTTCCHHHHHHHHHHHH
T ss_pred ecCCcccccccccccHHHHHHHHHHHHHCCeEEecCC----CCCEEEECCCCHHHHHHHHHHHH
Confidence 421 124678888999999999875 457888865 4445555555444
No 156
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.97 E-value=9e-29 Score=243.86 Aligned_cols=280 Identities=16% Similarity=0.152 Sum_probs=213.3
Q ss_pred CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHH----HCCCeEEEecCC
Q 014492 125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA----VNGAAVVKVPRK 200 (423)
Q Consensus 125 ~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~v~~~ 200 (423)
+|+++...+|++.+++++|. +++++++|+++++..++.+++++||+|+++.|+|..+...++ ..|++++.+|.+
T Consensus 77 r~~~p~~~~l~~~la~~~g~--~~~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~ 154 (414)
T 3ndn_A 77 RYGNPTVSVFEERLRLIEGA--PAAFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGD 154 (414)
T ss_dssp TTCCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT
T ss_pred CCCChHHHHHHHHHHHHHCC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCC
Confidence 45677778999999999995 578888999999999999999999999999999998776654 489999999863
Q ss_pred CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEc
Q 014492 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR 279 (423)
Q Consensus 201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~ 279 (423)
|+++++++++ +++++|++++|+||||.+.+.+++.++|+. |++||+||+|....... .. ..+.++++.
T Consensus 155 -----d~~~l~~ai~-~~t~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~~~~~~~~~-~~----~~g~div~~ 223 (414)
T 3ndn_A 155 -----DLSQWERALS-VPTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFATPLLQQ-GF----PLGVDVVVY 223 (414)
T ss_dssp -----CHHHHHHHTS-SCCSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCC-CG----GGTCSEEEE
T ss_pred -----CHHHHHHhcC-CCCeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECCCcccccCC-ch----hcCCCeEec
Confidence 8999999997 689999999999999999999999999987 99999999998432111 11 223458899
Q ss_pred cChhhhcccC-ccccccccCHHHHH-HHHHhcC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCC
Q 014492 280 TFSKRAGLAG-LRVGYGAFPLSIIE-YLWRAKQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPF 355 (423)
Q Consensus 280 S~SK~~g~~G-~R~G~i~~~~~~~~-~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 355 (423)
|+||.+|.+| +++|+++++++.+. .+..... ....++....++...+ +++....++..++++++.+.|++.+.
T Consensus 224 S~sK~l~~~G~~~~G~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~~~~~l---~~l~~r~~~~~~~a~~l~~~L~~~p~ 300 (414)
T 3ndn_A 224 SGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPAMSAFNAWVLLKGL---ETLAIRVQHSNASAQRIAEFLNGHPS 300 (414)
T ss_dssp ETTTTTTCSSCCCCEEEEECHHHHTTHHHHHHHHHCCCCCHHHHHHHHHHG---GGHHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred cCCccccCCCCceEEEEEECHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999878 89999999988776 5543322 2345565555444444 44666777778899999999988765
Q ss_pred Ce-e-cCC----------------CceEEEEEeCCC-----CCHHHHHHHHHhCCcEEEeCCC-----------------
Q 014492 356 LN-P-YPS----------------YSNFILCEVTSG-----MDAKKLKDDLAKMGVMIRHYNN----------------- 395 (423)
Q Consensus 356 ~~-~-~p~----------------~~~~~~~~~~~~-----~~~~~l~~~L~~~gI~v~~~~~----------------- 395 (423)
+. + +|. .|.++++.++++ .....|.+.|...++.+..|+.
T Consensus 301 v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~ 380 (414)
T 3ndn_A 301 VRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAKQRAFEVLDKMRLIDISNNLGDAKSLVTHPATTTHRAMGP 380 (414)
T ss_dssp EEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGGGHHHHHHHHHHHCSSSEECSCCSCSSCEEECGGGTTTCTTHH
T ss_pred EeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCccccHHHHHHHHHhCccceEcCCCCCCCceeeCccccccccCCH
Confidence 43 2 332 478899999742 2356677777656666655442
Q ss_pred ------CCCCCeEEEEecChhhHHHHHHHHhh
Q 014492 396 ------KELKGYVRVSVGKPEHTDALMECLMH 421 (423)
Q Consensus 396 ------~~~~~~iRis~~~~~~~~~l~~al~~ 421 (423)
...+++||||++.++ .+++.+.|++
T Consensus 381 ~~~~~~g~~~~~iRlsvG~e~-~~dli~dl~~ 411 (414)
T 3ndn_A 381 EGRAAIGLGDGVVRISVGLED-TDDLIADIDR 411 (414)
T ss_dssp HHHHHTTCCTTEEEEECCSSC-HHHHHHHHHH
T ss_pred HHHHhcCCCCCeEEEEeCcCC-HHHHHHHHHH
Confidence 123679999999865 4677766654
No 157
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.97 E-value=2.1e-29 Score=251.78 Aligned_cols=319 Identities=13% Similarity=0.152 Sum_probs=228.7
Q ss_pred CCC--CeeEcCCC--CCCCC-CCHHHHHHHhc-C---CCC--CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492 93 KPE--DIVKIDAN--ENPYG-PPPEVREALGQ-L---KFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (423)
Q Consensus 93 ~~~--~~i~l~~~--~~~~~-~~~~v~~al~~-~---~~~--~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~ 161 (423)
+++ .+||+..+ .+.++ .+|++.+|+.+ + .+. .+|+++...+|++.++++++...++|++++|++++++.
T Consensus 71 dG~~~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~L~e~la~~~~~~~~~v~~~~sGseA~~~ 150 (457)
T 3tfu_A 71 DGQPIEVLDAMSSWWTAIHGHGHPALDQALTTQLRVMNHVMFGGLTHEPAARLAKLLVDITPAGLDTVFFSDSGSVSVEV 150 (457)
T ss_dssp TTEEEEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCSCCCSSSEECHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHH
T ss_pred CCCeeEEEECCCcHhhhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCcHHHHHHH
Confidence 667 89999877 56676 57899888875 2 221 23455567799999999998777899999999999999
Q ss_pred HHHHhcC-------CC-CeEEEcCCCchhhHHHHHHCC--------------CeEEEecC--CCCCCCCHHHHHHHhhc-
Q 014492 162 IMRCVLD-------PG-DKIVDCPPTFTMYEFDAAVNG--------------AAVVKVPR--KSDFSLNVELIADAVER- 216 (423)
Q Consensus 162 ~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~g--------------~~~~~v~~--~~~~~~d~~~l~~~i~~- 216 (423)
+++.+.. +| +.|++..++|+.+...+...+ ..+..++. +.....|+++|++.+++
T Consensus 151 Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~ 230 (457)
T 3tfu_A 151 AAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQH 230 (457)
T ss_dssp HHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHHHHHHHHHhC
Confidence 9997764 55 589999999976554444331 12223332 11112478999998863
Q ss_pred -CCceEEEEcC-CCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCc--hhhhhccCCcEEEEccChhhhcc
Q 014492 217 -EKPKCIFLTS-PNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVLRTFSKRAGL 287 (423)
Q Consensus 217 -~~~~~i~l~~-p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~i~S~SK~~g~ 287 (423)
.++++|+++. ++||+|.+.+ ++++.++|+. |++||+||+|.+|...+. .....+..++++ ||||.++
T Consensus 231 ~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~a~~~~~~~pdii---t~sK~l~- 306 (457)
T 3tfu_A 231 AGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALFAADHAGVSPDIM---CVGKALT- 306 (457)
T ss_dssp GGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE---EECGGGG-
T ss_pred CCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchhHhHhcCCCceEE---EEChhhh-
Confidence 4678888887 8999999886 5666677776 999999999998864332 223333344444 8899887
Q ss_pred cC-ccccccccCHHHHHHHHH-------hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccC---CCC
Q 014492 288 AG-LRVGYGAFPLSIIEYLWR-------AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDV---PFL 356 (423)
Q Consensus 288 ~G-~R~G~i~~~~~~~~~l~~-------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~ 356 (423)
.| +|+||+++++++++.+.. ...+|+.+++++.++.++|+..+ -+...++++++++++.+.|+++ +.+
T Consensus 307 gG~~~lG~v~~~~~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~-~~~~~~~~~~~~~~l~~~L~~l~~~~~v 385 (457)
T 3tfu_A 307 GGYLSLAATLCTADVAHTISAGAAGALMHGPTFMANPLACAVSVASVELLL-GQDWRTRITELAAGLTAGLDTARALPAV 385 (457)
T ss_dssp TTSSCCEEEEEEHHHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHHHH-TSCHHHHHHHHHHHHHHHHGGGGGSTTE
T ss_pred CCCcceEEEEEcHHHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 45 799999999999998862 12347889999999988886311 0234555666677777777654 444
Q ss_pred eecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 357 NPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 357 ~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
...++.|+|+++++++..+..++.+.|+++||.+++++ +++||++. +.++++++.++|++
T Consensus 386 ~~vr~~G~~~~i~l~~~~~~~~~~~~l~~~Gv~v~~~~-----~~lRi~p~~~~t~eei~~~l~~L~~ 448 (457)
T 3tfu_A 386 TDVRVCGAIGVIECDRPVDLAVATPAALDRGVWLRPFR-----NLVYAMPPYICTPAEITQITSAMVE 448 (457)
T ss_dssp EEEEECSSCEEEEESSCCCHHHHHHHHHHTTEECCCBT-----TEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred eeeecCCeEEEEEECCcccHHHHHHHHHHCCeEEEecC-----CEEEEECCCCCCHHHHHHHHHHHHH
Confidence 44456788999999876678999999999999998754 69999854 45555655555543
No 158
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.97 E-value=1.7e-28 Score=242.03 Aligned_cols=316 Identities=15% Similarity=0.102 Sum_probs=224.6
Q ss_pred CeeEcCCCCCCCCCCHHHHHHHhcCC---CCCCCCC-------cchH----HHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492 96 DIVKIDANENPYGPPPEVREALGQLK---FPYIYPD-------PESR----RLRAALAKDSGLESDHILVGCGADELIDL 161 (423)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~~---~~~~Y~~-------~g~~----~lr~~ia~~~g~~~~~i~~t~G~~~al~~ 161 (423)
+.++|..+++.. +|++.+++.+.. +..+|+. .... .+++.+++++|+++++|++++| ++++..
T Consensus 26 ~~i~l~~~~~~~--~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~~sG-t~a~~~ 102 (417)
T 3n0l_A 26 EGLEMIASENFT--LPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFNCKFANVQPNSG-SQANQG 102 (417)
T ss_dssp HSEECCTTCCCC--CHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEECCCSSH-HHHHHH
T ss_pred cCeeeecccCCC--CHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHhCCCCcceEeccH-HHHHHH
Confidence 458998888766 799999998732 2123332 1222 3555888999998888989888 699999
Q ss_pred HHHHhcCCCCeEEEcCCCchhhHH---HHHH--CCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCC
Q 014492 162 IMRCVLDPGDKIVDCPPTFTMYEF---DAAV--NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236 (423)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~---~~~~--~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~ 236 (423)
++.+++++||+|+++.|+|..+.. .... .+..++.++.++++.+|++++++.+.+.++++|++++|+| |.+++
T Consensus 103 ~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~--G~~~~ 180 (417)
T 3n0l_A 103 VYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYEKVREIAKKEKPKLIVCGASAY--ARVID 180 (417)
T ss_dssp HHHHHSCTTCEEEEECC----------------CCSEEEEECCCTTSSCCHHHHHHHHHHHCCSEEEECCSSC--CSCCC
T ss_pred HHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccCCCCCCcCHHHHHHHHHhcCCeEEEECCccc--CccCC
Confidence 999999999999999999976543 2223 3456677777677789999999999756899999888886 89999
Q ss_pred HHHHHHHHcC-CCEEEEccCCcc-ccCCCchhhhhccCCcEEEEccChhhhcccCccccccccC-HHHHHHHHHhcCCC-
Q 014492 237 DEDLLKILEM-PILVVLDEAYTE-FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQPY- 312 (423)
Q Consensus 237 ~~~l~~i~~~-~~~li~Deay~~-~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~-~~~~~~l~~~~~~~- 312 (423)
.+++.++|+. |++||+||+|.. ..+.+.....+ ...++++.|+||.+ +|.|.||++++ +++++.+......+
T Consensus 181 l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~--~~~di~~~s~sK~l--~g~~~G~~~~~~~~~~~~~~~~~~~~~ 256 (417)
T 3n0l_A 181 FAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPF--PYAHVVSSTTHKTL--RGPRGGIIMTNDEELAKKINSAIFPGI 256 (417)
T ss_dssp HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCT--TTCSEEEEESSTTT--CSCSCEEEEESCHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHcCCEEEEECccchhhhhcccCCCcc--ccceEEEeeCcccc--CCCCeeEEEECCHHHHHHHhhhhCCcc
Confidence 9999999998 999999999742 22111111111 12348899999976 78899999998 78888887765543
Q ss_pred --CCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeecC--CCceEEEEEeC-CCCCHHHHHHHHHh
Q 014492 313 --NVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPYP--SYSNFILCEVT-SGMDAKKLKDDLAK 385 (423)
Q Consensus 313 --~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p--~~~~~~~~~~~-~~~~~~~l~~~L~~ 385 (423)
+.+...+.++..++.. .+++++.+++++++++++.+.|++.+ +.+.+ ..++++|+.++ .+.+...+.+.|.+
T Consensus 257 ~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 335 (417)
T 3n0l_A 257 QGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMDRK-FKLVSDGTDNHLVLMSFLDREFSGKDADLALGN 335 (417)
T ss_dssp CSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTT-CEEGGGSCSSSEEEEECTTSSSCHHHHHHHHHH
T ss_pred cCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCC-ceeccCCCCceEEEEEcccCCCCHHHHHHHHHH
Confidence 4455555555544443 35568888899999999999998854 44433 56778999885 35678889999999
Q ss_pred CCcEEEeCCCC------CCCCeEEEEec-------ChhhHHHHHHHHhh
Q 014492 386 MGVMIRHYNNK------ELKGYVRVSVG-------KPEHTDALMECLMH 421 (423)
Q Consensus 386 ~gI~v~~~~~~------~~~~~iRis~~-------~~~~~~~l~~al~~ 421 (423)
+||.++++..+ ...+.+|+++. +.++++++.++|++
T Consensus 336 ~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~ 384 (417)
T 3n0l_A 336 AGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIAD 384 (417)
T ss_dssp TTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHH
T ss_pred cCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHH
Confidence 99999865431 22467999975 24556666666554
No 159
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.96 E-value=1.7e-29 Score=244.36 Aligned_cols=285 Identities=16% Similarity=0.087 Sum_probs=203.2
Q ss_pred CCCC-CcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCC--eEEEcCCCchhhH---HHHHHCCCeEEEe
Q 014492 124 YIYP-DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD--KIVDCPPTFTMYE---FDAAVNGAAVVKV 197 (423)
Q Consensus 124 ~~Y~-~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd--~Vl~~~p~y~~~~---~~~~~~g~~~~~v 197 (423)
..|+ +++..+|++++++++|.+ ..++ ++|+++++..++++++.+|| .|+++.+.|.... ..+...|++++.+
T Consensus 41 ~~y~~~~~~~~l~~~la~~~~~~-~~i~-~~~G~~a~~~al~~~~~~gd~~~vi~~~~~~~~~~~~~~~~~~~g~~~~~v 118 (357)
T 3lws_A 41 DQYGTGAIIEPFEQKFADVLGMD-DAVF-FPSGTMAQQVALRIWSDETDNRTVAYHPLCHLEIHEQDGLKELHPIETILV 118 (357)
T ss_dssp EETTEETTHHHHHHHHHHHHTCS-EEEE-ESCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHHHSSCEEEEC
T ss_pred ccccCChHHHHHHHHHHHHhCCC-cEEE-ecCcHHHHHHHHHHHhhcCCCcEEEecccceeeeeccchhhhccCcEEEEe
Confidence 3464 457889999999999973 3444 46677899999998988888 6777666654322 2455679999999
Q ss_pred cCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCc-CcCCCHHHHHHHHcC----CCEEEEccCCcccc---CCCchhhhh
Q 014492 198 PRKSDFSLNVELIADAVEREKPKCIFLTSPNNPD-GSIINDEDLLKILEM----PILVVLDEAYTEFS---GLESRMEWV 269 (423)
Q Consensus 198 ~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPt-G~~~~~~~l~~i~~~----~~~li~Deay~~~~---~~~~~~~~~ 269 (423)
+. +++.+|++++++.. ++++|++++||||| |.+++.+++++|++. |++||+||+|.... .+.......
T Consensus 119 ~~-~~~~~d~~~l~~~~---~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~ 194 (357)
T 3lws_A 119 GA-ADRLMTLDEIKALP---DIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIA 194 (357)
T ss_dssp SC-TTSCCCHHHHHTCC---SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHH
T ss_pred cC-CCCCcCHHHHhcCc---CcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHH
Confidence 85 45689999999873 38999999999998 999998877777653 99999999987211 122222222
Q ss_pred ccCCcEEEEccChhhh-cccCccccccccCHHHHHHHHHhcCC----CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 014492 270 KKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYLWRAKQP----YNVSVAAEVAACAALQNPIYLEKVKEALIKERE 344 (423)
Q Consensus 270 ~~~~~~i~i~S~SK~~-g~~G~R~G~i~~~~~~~~~l~~~~~~----~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 344 (423)
...+ +++.|+||.+ ++.| ||+++++++++.+.+.... .......+.++..+|++ +.+.. +++.++++
T Consensus 195 ~~~d--~~~~s~sK~~~~~~g---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~-~~~~~~~~ 266 (357)
T 3lws_A 195 GLFD--SIYISFYKGLGGIAG---AILAGPAAFCQTARIWKRRYGGDLISLYPYIVSADYYYEL--RKDRM-GQYYEQAK 266 (357)
T ss_dssp TTSS--EEEEESSSTTCCSSC---EEEEECHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHH--HTTCH-HHHHHHHH
T ss_pred hcCC--EEEEeccccCCCCce---EEEEcCHHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHH--HHHHH-HHHHHHHH
Confidence 2223 4478999998 4334 9999999999888755422 22233334444455532 33333 34577888
Q ss_pred HHHHHHccCCCCee--cCCCceEEEEEeCCC--CCHHHHHHHHHhCCcEEEeCCCC-CCCCeEEEEecCh---hhHHHHH
Q 014492 345 RLFKLLKDVPFLNP--YPSYSNFILCEVTSG--MDAKKLKDDLAKMGVMIRHYNNK-ELKGYVRVSVGKP---EHTDALM 416 (423)
Q Consensus 345 ~l~~~L~~~~~~~~--~p~~~~~~~~~~~~~--~~~~~l~~~L~~~gI~v~~~~~~-~~~~~iRis~~~~---~~~~~l~ 416 (423)
++.+.|++++++.+ .|++++|+|++++.. .+.+++.+.|.++||.++++..+ ....++|++++.. .+.+++.
T Consensus 267 ~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~g~~~~~~~~~~r~~i~~~~~~~~~~~l~ 346 (357)
T 3lws_A 267 QLAEQFNALPGVHTTPEVPVSNMFHLHFDGQAADISPKLEQVQEETGLGFVGYLVDKDGYCSTEISVGDAYGELDQQTRD 346 (357)
T ss_dssp HHHHHHHTSTTEEEESSSCSSSEEEEEEESCHHHHHHHHHHHHHHHCEESCSCCEECSSEEEEEEEBCTTGGGSCHHHHH
T ss_pred HHHHHHHhCCCCeeccCCCcceEEEEEecCChHHHHHHHHHHHHhcCeEEecccccCCCceEEEEEecchhhhcCHHHHH
Confidence 99999999876665 578899999999743 23678888899999999987543 2334999998732 3568888
Q ss_pred HHHhhh
Q 014492 417 ECLMHL 422 (423)
Q Consensus 417 ~al~~l 422 (423)
+++++|
T Consensus 347 ~al~~l 352 (357)
T 3lws_A 347 AGFARL 352 (357)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888876
No 160
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.96 E-value=3.8e-29 Score=249.62 Aligned_cols=320 Identities=15% Similarity=0.148 Sum_probs=211.6
Q ss_pred CCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-CCCC-----CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492 92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFP-----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (423)
Q Consensus 92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~-----~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~ 162 (423)
..++.++|+..+ .+.++ .+|++.+++.+ +... ..|+.+...++++.++++++...++|++|+|+++++..+
T Consensus 41 ~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~a 120 (448)
T 3dod_A 41 INGKEYYDGFSSVWLNVHGHRKKELDDAIKKQLGKIAHSTLLGMTNVPATQLAETLIDISPKKLTRVFYSDSGAEAMEIA 120 (448)
T ss_dssp TTSCEEEETTHHHHTCSSCBSCHHHHHHHHHHHTTCSCCCCSSSEEHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHH
T ss_pred CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHHH
Confidence 456778999876 44554 36899988876 3221 123334456888999998877778999999999999999
Q ss_pred HHHhcC----CC----CeEEEcCCCchhhHHHHHHCCC-------------eEEEecCCCCCCC-----------CHHHH
Q 014492 163 MRCVLD----PG----DKIVDCPPTFTMYEFDAAVNGA-------------AVVKVPRKSDFSL-----------NVELI 210 (423)
Q Consensus 163 ~~~l~~----~g----d~Vl~~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~-----------d~~~l 210 (423)
++.+.. +| |+|++..|+|+.+...+...+. .+..+|.++.+.. |+++|
T Consensus 121 l~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 200 (448)
T 3dod_A 121 LKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIPYVYRSESGDPDECRDQCLREL 200 (448)
T ss_dssp HHHHHHHHHHTTCTTCCEEEEEC-----------------------------CEEECCCCCTTSSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCCccccCCccchhhhhHHHHHHH
Confidence 998765 44 9999999999866544433222 2344444333333 48899
Q ss_pred HHHhh--cCCceEEEEcCCC-CCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEEEcc
Q 014492 211 ADAVE--REKPKCIFLTSPN-NPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRT 280 (423)
Q Consensus 211 ~~~i~--~~~~~~i~l~~p~-NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S 280 (423)
++.+. ..++++|+++.++ |++|.+.+ ++++.++|+. |++||+||+|.+|...+.. ....+..+. +.+
T Consensus 201 e~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~~~d---i~t 277 (448)
T 3dod_A 201 AQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENVQPD---LMA 277 (448)
T ss_dssp HHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCS---EEE
T ss_pred HHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchhhhhhcCCCCC---EEE
Confidence 99886 3456777777777 88997665 5666666765 9999999999987643322 122222233 336
Q ss_pred ChhhhcccC-ccccccccCHHHHHHHHH-------h--cCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHH
Q 014492 281 FSKRAGLAG-LRVGYGAFPLSIIEYLWR-------A--KQPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLF 347 (423)
Q Consensus 281 ~SK~~g~~G-~R~G~i~~~~~~~~~l~~-------~--~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~ 347 (423)
|||.++ +| +|+||+++++++++.+.. . ...++.+++++.++.++|+. +++.+..++..+..++.+.
T Consensus 278 ~sK~l~-~G~~~ig~v~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~ 356 (448)
T 3dod_A 278 AGKGIT-GGYLPIAVTFATEDIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFESENIVEQVAEKSKKLHFLLQ 356 (448)
T ss_dssp ECGGGG-TTSSCCEEEEEEHHHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred eccccc-CCcCceEEEEECHHHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 899998 59 599999999999988865 2 23467899999999988863 3345555555555566665
Q ss_pred HHHccCCCCeecCCCceEEEEEeCCCCC-----------HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHH
Q 014492 348 KLLKDVPFLNPYPSYSNFILCEVTSGMD-----------AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALM 416 (423)
Q Consensus 348 ~~L~~~~~~~~~p~~~~~~~~~~~~~~~-----------~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~ 416 (423)
+ +.+++.+...++.|.|+++.+++..+ ..++++.|+++||.+++++ +++||+++...+.+++.
T Consensus 357 ~-l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~-----~~iRi~~~~~~t~e~i~ 430 (448)
T 3dod_A 357 D-LHALPHVGDIRQLGFMCGAELVRSKETKEPYPADRRIGYKVSLKMRELGMLTRPLG-----DVIAFLPPLASTAEELS 430 (448)
T ss_dssp H-HTTSTTEEEEEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECCEET-----TEEEECCCTTCCHHHHH
T ss_pred H-HhcCCCeEEEEeeeEEEEEEEccCcccccccchhhHHHHHHHHHHHHCCcEEeccC-----CEEEEECCCCCCHHHHH
Confidence 5 65666444445678899999864322 4788999999999998863 79999755322234444
Q ss_pred HHHhh
Q 014492 417 ECLMH 421 (423)
Q Consensus 417 ~al~~ 421 (423)
+++++
T Consensus 431 ~~l~~ 435 (448)
T 3dod_A 431 EMVAI 435 (448)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44444
No 161
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.96 E-value=8.8e-29 Score=240.56 Aligned_cols=299 Identities=14% Similarity=0.119 Sum_probs=224.5
Q ss_pred CCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh---cCCCCeEEEcCCCchhh
Q 014492 108 GPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV---LDPGDKIVDCPPTFTMY 183 (423)
Q Consensus 108 ~~~~~v~~al~~~-~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l---~~~gd~Vl~~~p~y~~~ 183 (423)
+.++++.+++.+. .....+|.+...++|+++++++|.+ ++++|+|+++++..++.++ +++||+|+++.|+|..+
T Consensus 10 ~~~~~v~~a~~~~~~~~~~~~~~~~~~l~~~la~~~~~~--~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl~~~~~~~~~ 87 (375)
T 2fnu_A 10 CLDKEDKKAVLEVLNSKQLTQGKRSLLFEEALCEFLGVK--HALVFNSATSALLTLYRNFSEFSADRNEIITTPISFVAT 87 (375)
T ss_dssp CCCHHHHHHHHHHHTSSCCSSSHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHSSCCCTTSCEEEECSSSCTHH
T ss_pred CCCHHHHHHHHHHHHcCcccCChHHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHhcccCCCCCEEEECCCccHhH
Confidence 3568899998773 3333346666789999999999975 8999999999999999999 88999999999999999
Q ss_pred HHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCC
Q 014492 184 EFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGL 262 (423)
Q Consensus 184 ~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~ 262 (423)
...++..|++++.++.+++..+|++++++.+. +++++|++++| ||.+.+.+++.++|+. |+++|+||+|..+...
T Consensus 88 ~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~-~~~~~v~~~~~---tG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~ 163 (375)
T 2fnu_A 88 ANMLLESGYTPVFAGIKNDGNIDELALEKLIN-ERTKAIVSVDY---AGKSVEVESVQKLCKKHSLSFLSDSSHALGSEY 163 (375)
T ss_dssp HHHHHHTTCEEEECCBCTTSSBCGGGSGGGCC-TTEEEEEEECG---GGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEE
T ss_pred HHHHHHCCCEEEEeccCCCCCCCHHHHHhhcC-cCceEEEEeCC---cCCccCHHHHHHHHHHcCCEEEEECccccCCeE
Confidence 99999999999999987666799999999997 58899888876 9999999999999988 9999999999865421
Q ss_pred CchhhhhccCCcEEEEccCh--hhhcccCcccccccc-C-HHHHHHHHHhcCC------------------CCCcHHHHH
Q 014492 263 ESRMEWVKKHDNLIVLRTFS--KRAGLAGLRVGYGAF-P-LSIIEYLWRAKQP------------------YNVSVAAEV 320 (423)
Q Consensus 263 ~~~~~~~~~~~~~i~i~S~S--K~~g~~G~R~G~i~~-~-~~~~~~l~~~~~~------------------~~~~~~~~~ 320 (423)
.. ..+...+ .+++.|+| |.+|. | +|++++ + +++++++...... +..+.+...
T Consensus 164 ~~--~~~~~~~-~i~~~s~s~~K~~~~-g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 237 (375)
T 2fnu_A 164 QN--KKVGGFA-LASVFSFHAIKPITT-A--EGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQSA 237 (375)
T ss_dssp TT--EETTSSS-SEEEEECCTTSSSCC-S--SCEEEEESCHHHHHHHHHHTBTTEEESSSSCEEESSCCCBCCCCHHHHH
T ss_pred CC--eeccccC-CeEEEeCCCCCCccc-c--CceEEEeCCHHHHHHHHHHHhcCCccccccccccccccccCCCCHHHHH
Confidence 11 1122222 37778888 98874 6 788777 4 7788877665321 133444443
Q ss_pred HHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCC-----C-ceEEEEEeCC-CC-CHHHHHHHHHhCCcEEEe
Q 014492 321 AACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPS-----Y-SNFILCEVTS-GM-DAKKLKDDLAKMGVMIRH 392 (423)
Q Consensus 321 a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~-----~-~~~~~~~~~~-~~-~~~~l~~~L~~~gI~v~~ 392 (423)
++... .+++++..++.+++++++.+.|++++++.+.+. . ..++++.++. +. +..++.+.|.++||.++.
T Consensus 238 ~~~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~ 314 (375)
T 2fnu_A 238 LGLSQ---LKKAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQKFFTCKKLILESLHKRGILAQV 314 (375)
T ss_dssp HHHHH---HTTHHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECGGGGGGHHHHHHHHHHTTEECBC
T ss_pred HHHHH---HHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCCCcceEEEEEEeCccccchHHHHHHHHHHCCCCccc
Confidence 33333 245678888899999999999999865554322 2 2345777763 23 688899999999999983
Q ss_pred CCCCC--------------C-------CCeEEEEec---ChhhHHHHHHHHhh
Q 014492 393 YNNKE--------------L-------KGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 393 ~~~~~--------------~-------~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
...+. . .+++||+++ +.++++++.++|++
T Consensus 315 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~ 367 (375)
T 2fnu_A 315 HYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLK 367 (375)
T ss_dssp CCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred cccccccchhhhcCCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHHHHHH
Confidence 21110 1 268999998 56677777777765
No 162
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.96 E-value=5.1e-29 Score=248.89 Aligned_cols=325 Identities=14% Similarity=0.139 Sum_probs=217.7
Q ss_pred CCCCCCeeEcCCC--CCCCCC-CHHHHHHHhc-CC---C-C-CCCCCcchHHHHHHHHHHhCCC-CCcEEEeCCHHHHHH
Q 014492 91 GRKPEDIVKIDAN--ENPYGP-PPEVREALGQ-LK---F-P-YIYPDPESRRLRAALAKDSGLE-SDHILVGCGADELID 160 (423)
Q Consensus 91 ~~~~~~~i~l~~~--~~~~~~-~~~v~~al~~-~~---~-~-~~Y~~~g~~~lr~~ia~~~g~~-~~~i~~t~G~~~al~ 160 (423)
+..++.+||+..+ .+.++. +|++.+++.+ +. + . ..|+.....+|++.++++++.+ .++|++|+|+++++.
T Consensus 60 d~~G~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~ 139 (453)
T 4ffc_A 60 DADGNSFIDLGAGIAVTTVGASHPAVAAAIADQATHFTHTCFMVTPYEQYVQVAELLNALTPGDHDKRTALFNSGAEAVE 139 (453)
T ss_dssp ETTSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHCSCCTTTTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHH
T ss_pred eCCCCEEEEcCCCcccCcCCCCCHHHHHHHHHHHHhccccccCcCCCHHHHHHHHHHHHhCCCCCCcEEEEeCcHHHHHH
Confidence 3456789999887 667764 8899888765 21 1 1 1245555678999999998754 579999999999999
Q ss_pred HHHHHhcC--CCCeEEEcCCCchhhHHHHHHCCC--------------eEEEecCC----CCCCCC--------HHHHHH
Q 014492 161 LIMRCVLD--PGDKIVDCPPTFTMYEFDAAVNGA--------------AVVKVPRK----SDFSLN--------VELIAD 212 (423)
Q Consensus 161 ~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~--------------~~~~v~~~----~~~~~d--------~~~l~~ 212 (423)
.+++.... .++.|++..++|+.+...+...+. .+..+|.+ +.++.+ ++.+++
T Consensus 140 ~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~ 219 (453)
T 4ffc_A 140 NAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIET 219 (453)
T ss_dssp HHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHH
Confidence 99986542 458999999999866655443321 34555533 222333 355666
Q ss_pred HhhcCCceEEEEcCCCCCcC-cCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEEEccChhh
Q 014492 213 AVEREKPKCIFLTSPNNPDG-SIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKR 284 (423)
Q Consensus 213 ~i~~~~~~~i~l~~p~NPtG-~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~ 284 (423)
.+. .+..+++++.|+|++| .+.+ .+++.++|+. |++||+||+|.+|...+.. ....+.... +.||||.
T Consensus 220 ~i~-~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~a~~~~~~~pd---i~t~sK~ 295 (453)
T 4ffc_A 220 QIG-AQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWFASEHEGIVPD---IVTMAKG 295 (453)
T ss_dssp HTC-GGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCS---EEEECGG
T ss_pred hcC-CCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccchhhhcCCCcc---hHhhhhh
Confidence 664 3445555566766665 4444 4556666665 9999999999988643321 122222222 4478999
Q ss_pred hcccCccccccccCHHHHHHHHHhc--CCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeec
Q 014492 285 AGLAGLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPY 359 (423)
Q Consensus 285 ~g~~G~R~G~i~~~~~~~~~l~~~~--~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 359 (423)
++. |+|+||+++++++++.+.... ..|+.+++++.++.++|+. +++.++.++..+..++.+.+.+++++.+...
T Consensus 296 ~~~-G~~~G~~~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 374 (453)
T 4ffc_A 296 IAG-GMPLSAVTGRAELMDAVYAGGLGGTYGGNPVTCAAAVAALGVMRELDLPARARAIEASVTSRLSALAEEVDIIGEV 374 (453)
T ss_dssp GGT-TSSCEEEEEEHHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEEEE
T ss_pred hcC-CcCeEEEEECHHHHhhhcccCcCCCCCcCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEEE
Confidence 985 999999999999988776443 3478899999999988863 3344445554455555555555566655555
Q ss_pred CCCceEEEEEeCC-------CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 360 PSYSNFILCEVTS-------GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 360 p~~~~~~~~~~~~-------~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
++.|+|+++.+.+ .....++.+.|.++||.+++++. ..+++||+++...+.+++++++++|
T Consensus 375 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~--~~~~iRi~~~~~~t~e~i~~~l~~l 442 (453)
T 4ffc_A 375 RGRGAMLAIEIVKPGTLEPDAALTKSIAAEALSQGVLILTCGT--FGNVIRLLPPLVIGDDLLDEGITAL 442 (453)
T ss_dssp EEETTEEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECCEECT--TSCEEEECCCTTCCHHHHHHHHHHH
T ss_pred EeeceEEEEEEecCcccCCCHHHHHHHHHHHHhCCCEEecCCC--CCCEEEEECCCCCCHHHHHHHHHHH
Confidence 6778899998832 22367788899999999998753 2479999876333334455555443
No 163
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.96 E-value=8.1e-28 Score=241.59 Aligned_cols=317 Identities=16% Similarity=0.105 Sum_probs=229.1
Q ss_pred CeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCC----cc----hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh
Q 014492 96 DIVKIDANENPYGPPPEVREALGQL-KFPYIYPD----PE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV 166 (423)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~----~g----~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l 166 (423)
.++.|+ +..+ ...|++.+++.+. ...+.|+. .| ..++++.+++++|++. .+++++|+++++..++.++
T Consensus 67 ~~~~lg-~~~~-~~~p~v~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~~-~~~~~~ggt~a~~~al~~~ 143 (474)
T 1wyu_B 67 TFYPLG-SCTM-KYNPKLHEEAARLFADLHPYQDPRTAQGALRLMWELGEYLKALTGMDA-ITLEPAAGAHGELTGILII 143 (474)
T ss_dssp SCCCBT-TTCC-CCCCHHHHHHHHTTSSCCTTSCGGGCHHHHHHHHHHHHHHHHHHTCSE-EECCCSSHHHHHHHHHHHH
T ss_pred Cccccc-cccc-cCCHHHHHHHHHHHHhcCCCCchhhChHHHHHHHHHHHHHHHHHCCCc-eeecChHHHHHHHHHHHHH
Confidence 456777 3322 2345666666543 21133422 23 3456777777788764 4678899999998755543
Q ss_pred ----cCCCC-----eEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcC-CC
Q 014492 167 ----LDPGD-----KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI-IN 236 (423)
Q Consensus 167 ----~~~gd-----~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~-~~ 236 (423)
.++|| +|+++.|+|+.+...++..|++++.+|.++++.+|+++|++++. .++++|++++| ||||.+ .+
T Consensus 144 ~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv~v~~~~~~~~d~~~L~~~i~-~~t~~v~~~~p-n~~G~~~~~ 221 (474)
T 1wyu_B 144 RAYHEDRGEGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSGPEGEVDLEALKRELG-PHVAALMLTNP-NTLGLFERR 221 (474)
T ss_dssp HHHHHHTTCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBCTTSSBCHHHHHHHCS-TTEEEEEECSS-CTTSCCCTT
T ss_pred HHHHHhcCCccCCCEEEEeCCcChhhHHHHHHCCCEEEEecCCCCCCcCHHHHHHhhC-CCceEEEEECC-CCCcccCCC
Confidence 35787 99999999999999999999999999987788899999999997 68999999998 589998 58
Q ss_pred HHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhccc-C---ccccccccCHHHHHHHHH-h--
Q 014492 237 DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLA-G---LRVGYGAFPLSIIEYLWR-A-- 308 (423)
Q Consensus 237 ~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~-G---~R~G~i~~~~~~~~~l~~-~-- 308 (423)
.+++.++|+. |+++|+||+|..+..+.... ...+.++++.|++|.|+.+ | .|+||+++++++++.+.. .
T Consensus 222 l~~i~~l~~~~g~~li~Dea~~~~~~g~~~~---~~~g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~l~~~l~~~~~~ 298 (474)
T 1wyu_B 222 ILEISRLCKEAGVQLYYDGANLNAIMGWARP---GDMGFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPVPLVE 298 (474)
T ss_dssp HHHHHHHHHHHTCEEEEEGGGGGGTTTTCCH---HHHTCSEEECCTTTTTCCCCTTSCCCCCCEEECGGGGGGCCSCEEE
T ss_pred HHHHHHHHHHcCCEEEEeCchhhhhccCCCc---ccCCCcEEEEeCccccccCCCCCCCCeEEEEEcHHHHHhCCCCeee
Confidence 9999999987 99999999997665422111 1224568889999999766 4 699999999988766541 0
Q ss_pred ------------------cCCCCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceE--E
Q 014492 309 ------------------KQPYNVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNF--I 366 (423)
Q Consensus 309 ------------------~~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~--~ 366 (423)
...++.+..++.++..++.. .+++++..+++.++++++.+.|++++ +.+....+.| +
T Consensus 299 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~ 377 (474)
T 1wyu_B 299 RGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEKG-YRVPYDGPSMHEF 377 (474)
T ss_dssp ECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CBCSSCSSCCSCE
T ss_pred ccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-cEecCCCCcceEE
Confidence 01134567778888887764 46788889999999999999998873 4442222233 5
Q ss_pred EEEeCCCCCHHHHHHHHHhCCcEEEeCCCC-CCCCeEEEEecC---hhhHHHHHHHHhh
Q 014492 367 LCEVTSGMDAKKLKDDLAKMGVMIRHYNNK-ELKGYVRVSVGK---PEHTDALMECLMH 421 (423)
Q Consensus 367 ~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~-~~~~~iRis~~~---~~~~~~l~~al~~ 421 (423)
++.++.+.+..++.+.|.++||.+.....+ ...+++||+++. .++++++.++|++
T Consensus 378 ~~~~~~~~~~~~l~~~L~~~Gi~~~~~~~~~~~~~~lRis~~~~~t~e~id~~~~~L~~ 436 (474)
T 1wyu_B 378 VAQPPEGFRALDLAKGLLELGFHPPTVYFPLIVKEALMVEPTETEAKETLEAFAEAMGA 436 (474)
T ss_dssp EEBCSTTCCHHHHHHHHHHTTCCCCEESCSTTSTTCEEECCCTTSCHHHHHHHHHHHHH
T ss_pred EEEcCCCCCHHHHHHHHHHCCccccccccccccCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence 667755678999999999899986322211 236899999984 5556666666654
No 164
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.96 E-value=1.1e-28 Score=247.52 Aligned_cols=281 Identities=16% Similarity=0.104 Sum_probs=212.7
Q ss_pred hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCe---EEEcCCCchhh----HHHHHHCCCeE-----EEec
Q 014492 131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK---IVDCPPTFTMY----EFDAAVNGAAV-----VKVP 198 (423)
Q Consensus 131 ~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~---Vl~~~p~y~~~----~~~~~~~g~~~-----~~v~ 198 (423)
.+++++.+++++|.++++|++|+|+++++++++.+++++|+. |+++.|+|+.. ...++..|+++ ..+|
T Consensus 113 ~~~l~~~la~~~g~~~~~v~~t~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~ 192 (465)
T 3e9k_A 113 DESIVGLMKDIVGANEKEIALMNALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKP 192 (465)
T ss_dssp THHHHGGGHHHHTCCGGGEEECSCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECC
T ss_pred HHHHHHHHHHHcCCCcCCEEEECCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEec
Confidence 467999999999999999999999999999999999877655 99999999863 34667789885 3345
Q ss_pred CCCCCCCCHHHHHHHhhc--CCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcE
Q 014492 199 RKSDFSLNVELIADAVER--EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNL 275 (423)
Q Consensus 199 ~~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~ 275 (423)
.++++.+|++++++.+++ +++++|++++|+||||.+++.++|.++|+. |+++|+|++|+...... .+...+..
T Consensus 193 ~~~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~----~~~~~~~D 268 (465)
T 3e9k_A 193 REGEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVEL----YLHDWGVD 268 (465)
T ss_dssp CTTCSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCC----CHHHHTCC
T ss_pred CCCCCccCHHHHHHHHHhcCCCeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcCC----chhhcCCC
Confidence 666778999999999963 478999999999999999999999999987 99999999998443211 11123445
Q ss_pred EEEccChhhhcccCccccccccCHHHHHHHHHhcC---------------------------CCCCcHHHHHHHHHHhCC
Q 014492 276 IVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ---------------------------PYNVSVAAEVAACAALQN 328 (423)
Q Consensus 276 i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~---------------------------~~~~~~~~~~a~~~~l~~ 328 (423)
+++.|++|.++....++|++++++++++.+..... ..+++.....++.++++.
T Consensus 269 ~~~~s~~K~l~~gp~~~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~ 348 (465)
T 3e9k_A 269 FACWCSYKYLNAGAGGIAGAFIHEKHAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEI 348 (465)
T ss_dssp EEEECSSSTTCCCTTCCCEEEECGGGTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHH
T ss_pred EEEECcccccccCCCceEEEEEcHHHHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHH
Confidence 88999999883223368999998887654431110 114566666666666654
Q ss_pred h-HH-HHHHHHHHHHHHHHHHHHHccC----------CCCeec-CC----CceEEEEEeCCCCCHHHHHHHHHhCCcEEE
Q 014492 329 P-IY-LEKVKEALIKERERLFKLLKDV----------PFLNPY-PS----YSNFILCEVTSGMDAKKLKDDLAKMGVMIR 391 (423)
Q Consensus 329 ~-~~-~~~~~~~~~~~~~~l~~~L~~~----------~~~~~~-p~----~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~ 391 (423)
. ++ +++++++++++++++.+.|+++ +++.+. |. .++++++.++ .+..++.+.|.++||.++
T Consensus 349 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~--~~~~~l~~~L~~~Gi~v~ 426 (465)
T 3e9k_A 349 FKQATMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITFS--VPNKDVFQELEKRGVVCD 426 (465)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEEEC--CTTCCHHHHHHTTTEECE
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEEec--CCHHHHHHHHHHCCEEEe
Confidence 2 22 6888999999999999999874 445543 33 3789999986 456789999999999998
Q ss_pred eCCCCCCCCeEEEEec----ChhhHHHHHHHHhh
Q 014492 392 HYNNKELKGYVRVSVG----KPEHTDALMECLMH 421 (423)
Q Consensus 392 ~~~~~~~~~~iRis~~----~~~~~~~l~~al~~ 421 (423)
... ++++||+++ +.++++++.++|++
T Consensus 427 ~~~----~~~iRis~~~~~~t~edi~~~~~~l~~ 456 (465)
T 3e9k_A 427 KRN----PNGIRVAPVPLYNSFHDVYKFTNLLTS 456 (465)
T ss_dssp EET----TTEEEEBCCTTTCCHHHHHHHHHHHHH
T ss_pred cCC----CCEEEEeCcccCCCHHHHHHHHHHHHH
Confidence 543 589999983 56666666666654
No 165
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.96 E-value=2.4e-28 Score=240.27 Aligned_cols=279 Identities=16% Similarity=0.158 Sum_probs=201.3
Q ss_pred CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHH----HHHCCCeEEEecC
Q 014492 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPR 199 (423)
Q Consensus 124 ~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~ 199 (423)
.+|++++..+||+++++++|.+ ++|++++|+ +++..++. ++++||+|+++.|+|...... ++..|++++.++.
T Consensus 62 ~r~~~p~~~~l~~~la~~~g~~-~~i~~~sG~-~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v~~ 138 (403)
T 3cog_A 62 SRSGNPTRNCLEKAVAALDGAK-YCLAFASGL-AATVTITH-LLKAGDQIICMDDVYGGTNRYFRQVASEFGLKISFVDC 138 (403)
T ss_dssp ----CHHHHHHHHHHHHHHTCS-EEEEESCHH-HHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTGGGGTCEEEEECT
T ss_pred cCCCCchHHHHHHHHHHHhCCC-cEEEECCHH-HHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHHHHHHcCCEEEEECC
Confidence 4578888899999999999975 677777775 89999999 899999999999999864433 3568999999986
Q ss_pred CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-C-CEEEEccCCccccCCCchhhhhccCCcEEE
Q 014492 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-P-ILVVLDEAYTEFSGLESRMEWVKKHDNLIV 277 (423)
Q Consensus 200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~-~~li~Deay~~~~~~~~~~~~~~~~~~~i~ 277 (423)
+ |++++++.++ +++++|++++|+||||.+++.+++.++|+. | +++|+|++|..+.... .. ..+.+++
T Consensus 139 ~-----d~~~l~~~i~-~~t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~livD~~~~~~~~~~-~~----~~~~div 207 (403)
T 3cog_A 139 S-----KIKLLEAAIT-PETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMSPYFQR-PL----ALGADIS 207 (403)
T ss_dssp T-----SHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCEEEEECTTTCTTTCC-TT----TTTCSEE
T ss_pred C-----CHHHHHHhcC-cCCeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCEEEEECCCcccccCC-cc----ccCCeEE
Confidence 3 8999999997 689999999999999999999999999998 8 9999999999775421 11 1356799
Q ss_pred EccChhhhcccC-ccccccccC-HHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccC
Q 014492 278 LRTFSKRAGLAG-LRVGYGAFP-LSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDV 353 (423)
Q Consensus 278 i~S~SK~~g~~G-~R~G~i~~~-~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 353 (423)
+.|+||.++.+| .|+||++++ +++++.+...... ...+++.+.++...++. +....++..++...+.+.|++.
T Consensus 208 ~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~~~~~~~~l~~---l~~r~~~~~~n~~~l~~~l~~~ 284 (403)
T 3cog_A 208 MYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQNSLGAVPSPIDCYLCNRGLKT---LHVRMEKHFKNGMAVAQFLESN 284 (403)
T ss_dssp EEETTTTTTCSSCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEcChhhccCCCCCeEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH---HHHHHHHHHHHHHHHHHHHhcC
Confidence 999999998766 479999984 7888887765443 34688888888877765 2333444455555555555443
Q ss_pred C--------------CCeecC----CCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeC---C------------CC----
Q 014492 354 P--------------FLNPYP----SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHY---N------------NK---- 396 (423)
Q Consensus 354 ~--------------~~~~~p----~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~---~------------~~---- 396 (423)
+ +..+.+ ..+.++.+.+++ ..+++.+.|.+.||.++.. + ..
T Consensus 285 ~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~l~~--~~~~~~~~l~~~~i~~~~~s~G~~~sl~~~p~~~~~~~~~~ 362 (403)
T 3cog_A 285 PWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYIKG--TLQHAEIFLKNLKLFTLAESLGGFESLAELPAIMTHASVLK 362 (403)
T ss_dssp TTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESS--CHHHHHHHHHHCSSSEECSCCSSSSCEEECTTTTTTTTSCH
T ss_pred CCEEEEECCCCCCCCcHHHHHhcCCCCceEEEEEecC--CHHHHHHHHHhCCcceEccCCCCcceeeecccccccccCCH
Confidence 2 222111 236666667863 2355666677889876532 1 00
Q ss_pred ------C-CCCeEEEEecChh---hHHHHHHHHhh
Q 014492 397 ------E-LKGYVRVSVGKPE---HTDALMECLMH 421 (423)
Q Consensus 397 ------~-~~~~iRis~~~~~---~~~~l~~al~~ 421 (423)
+ .+++||||++.++ ..++|.++|+.
T Consensus 363 ~~~~~~g~~~~~iRlSvg~e~~~d~i~~l~~al~~ 397 (403)
T 3cog_A 363 NDRDVLGISDTLIRLSVGLEDEEDLLEDLDQALKA 397 (403)
T ss_dssp HHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCcCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence 1 1579999998643 34444455443
No 166
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.96 E-value=1e-28 Score=247.72 Aligned_cols=322 Identities=14% Similarity=0.154 Sum_probs=223.5
Q ss_pred CCCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-CC-CC-----CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHH
Q 014492 91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LK-FP-----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELID 160 (423)
Q Consensus 91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~-~~-----~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~ 160 (423)
+..++.+|||..| .+.++ .+|++.+|+.+ +. .. .+|+++...+|.+.++++++...++|++++|++++++
T Consensus 51 d~~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~v~~~~sGseA~~ 130 (472)
T 3hmu_A 51 DSEGEEILDAMAGLWCVNIGYGRDELAEVAARQMRELPYYNTFFKTTHVPAIALAQKLAELAPGDLNHVFFAGGGSEAND 130 (472)
T ss_dssp ETTCCEEECTTHHHHTCTTCBCCHHHHHHHHHHHHHCSCCCSSSSEECHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHH
T ss_pred ECCCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHH
Confidence 3457789999887 66676 47899988865 21 11 1345555678999999999877789999999999999
Q ss_pred HHHHHhcC--------CCCeEEEcCCCchhhHHHHHHCCC------------eEEEecCCCCCC----CC--------HH
Q 014492 161 LIMRCVLD--------PGDKIVDCPPTFTMYEFDAAVNGA------------AVVKVPRKSDFS----LN--------VE 208 (423)
Q Consensus 161 ~~~~~l~~--------~gd~Vl~~~p~y~~~~~~~~~~g~------------~~~~v~~~~~~~----~d--------~~ 208 (423)
.+++.+.. +++.|++..|+|+.+...+...+. .+..++.+..+. .| ++
T Consensus 131 ~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~ 210 (472)
T 3hmu_A 131 TNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGDMDPEEFGLARAR 210 (472)
T ss_dssp HHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCccccCCcccCHHHHHHHHHH
Confidence 99998764 468899999999877665544333 244455322111 34 78
Q ss_pred HHHHHhhc---CCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCc--hhhhhccCCcEEEE
Q 014492 209 LIADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVL 278 (423)
Q Consensus 209 ~l~~~i~~---~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~i 278 (423)
+|++.+.+ .++++|+++.++|++|.+.+ .+++.++|+. |++||+||+|.+|...+. .....+..++++
T Consensus 211 ~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v~pdi~-- 288 (472)
T 3hmu_A 211 ELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWFGTQTMGIRPHIM-- 288 (472)
T ss_dssp HHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEE--
T ss_pred HHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccchhHHhCCCCcee--
Confidence 88888853 45677777777888898876 6667777776 999999999998864432 122233334433
Q ss_pred ccChhhhcccCccccccccCHHHHHHHHH----hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHH-HHHHHHHHHHcc-
Q 014492 279 RTFSKRAGLAGLRVGYGAFPLSIIEYLWR----AKQPYNVSVAAEVAACAALQNPIYLEKVKEALI-KERERLFKLLKD- 352 (423)
Q Consensus 279 ~S~SK~~g~~G~R~G~i~~~~~~~~~l~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~-~~~~~l~~~L~~- 352 (423)
+|||.++..|+|+||+++++++++.+.. ...+|+.+++++.++.++|+..+. +...++++ ++.+++.+.|++
T Consensus 289 -t~sK~l~gg~~plG~v~~~~~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~-~~~~~~~~~~~~~~l~~~L~~l 366 (472)
T 3hmu_A 289 -TIAKGLSSGYAPIGGSIVCDEVAHVIGKDEFNHGYTYSGHPVAAAVALENLRILEE-ENILDHVRNVAAPYLKEKWEAL 366 (472)
T ss_dssp -EECGGGTTTSSCCEEEEEEHHHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHHHHHH-TTHHHHHHHTHHHHHHHHHHGG
T ss_pred -eechhhhcCCcceEEEEECHHHHHhcccCCccccCCCCCCHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHH
Confidence 5789988555999999999999998831 122478899999999998863211 23344444 555555555543
Q ss_pred --CCCCeecCCCceEEEEEeCCCC------------CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEe---cChhhHHHH
Q 014492 353 --VPFLNPYPSYSNFILCEVTSGM------------DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSV---GKPEHTDAL 415 (423)
Q Consensus 353 --~~~~~~~p~~~~~~~~~~~~~~------------~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~---~~~~~~~~l 415 (423)
.+.+...++.|+|+++++.+.. ...++.+.|+++||++++++ +++||++ .+.++++++
T Consensus 367 ~~~~~v~~vr~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-----~~iRi~p~~~~t~e~i~~~ 441 (472)
T 3hmu_A 367 TDHPLVGEAKIVGMMASIALTPNKASRAKFASEPGTIGYICRERCFANNLIMRHVG-----DRMIISPPLVITPAEIDEM 441 (472)
T ss_dssp GGSTTEEEEEEETTEEEEEECSCGGGTCCBSSCTTHHHHHHHHHHHHTTBCCEEET-----TEEEECCCTTCCHHHHHHH
T ss_pred hcCCCeEEEEecCceEEEEEecCccccccccchhHHHHHHHHHHHHHCCcEEEecC-----CEEEEECCCCCCHHHHHHH
Confidence 4544445667888888885321 15678889999999999874 8999994 355555555
Q ss_pred HHHHhh
Q 014492 416 MECLMH 421 (423)
Q Consensus 416 ~~al~~ 421 (423)
.++|++
T Consensus 442 l~~l~~ 447 (472)
T 3hmu_A 442 FVRIRK 447 (472)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555543
No 167
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.96 E-value=2.1e-27 Score=227.27 Aligned_cols=270 Identities=16% Similarity=0.112 Sum_probs=202.3
Q ss_pred HHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHH----HHCCCeEEEecCCCCCCCCHH
Q 014492 133 RLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPRKSDFSLNVE 208 (423)
Q Consensus 133 ~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~d~~ 208 (423)
++++++++++|.+ +.+++++| ++++..++.+++++||+|+++.|+|+.+...+ +..|++++.++. .|++
T Consensus 2 ~l~~~la~~~g~~-~~i~~~sG-~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~ 74 (331)
T 1pff_A 2 ALEGKIAKLEHAE-ACAATASG-MGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDM-----AVPG 74 (331)
T ss_dssp HHHHHHHHHHTCS-EEEEESSH-HHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT-----TSTT
T ss_pred hHHHHHHHHhCCC-eEEEeCCh-HHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCC-----CCHH
Confidence 6899999999976 66666666 79999999999999999999999999876654 458999999984 4788
Q ss_pred HHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC--CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhc
Q 014492 209 LIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM--PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG 286 (423)
Q Consensus 209 ~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~--~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 286 (423)
++++.++ +++++|++++|+||||.+++.+++.++|+. |+++|+||+|..+.... .. ..++++++.|+||.++
T Consensus 75 ~l~~~i~-~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~~~-~~----~~~~d~~~~s~~K~~~ 148 (331)
T 1pff_A 75 NIEKHLK-PNTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTN-PL----DLGVDIVVHSATKYIN 148 (331)
T ss_dssp HHHHTCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCC-GG----GGTCSEEEEETTTTTS
T ss_pred HHHHhhc-CCCeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccccCC-hh----hcCCcEEEEECccccC
Confidence 9999997 689999999999999999999999999986 89999999998654321 11 2456799999999999
Q ss_pred ccCcc-ccccccCH-HHHHHHHHhcCC-C--CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC-------
Q 014492 287 LAGLR-VGYGAFPL-SIIEYLWRAKQP-Y--NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP------- 354 (423)
Q Consensus 287 ~~G~R-~G~i~~~~-~~~~~l~~~~~~-~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~------- 354 (423)
.+|.| +||+++++ ++++.+...... + +.+++.+.++...++ +.....+...++.+.+.+.|++.+
T Consensus 149 ~~~~r~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~ 225 (331)
T 1pff_A 149 GHTDVVAGLVCSRADIIAKVKSQGIKDITGAIISPHDAWLITRGTL---TLDMRVKRAAENAQKVAEFLHEHKAVKKVYY 225 (331)
T ss_dssp SSSSCCCEEEEECHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHCTTCCCEEC
T ss_pred CCCCceEEEEEeCcHHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcc---hHHHHHHHHHHHHHHHHHHHHcCCCeeEEEC
Confidence 99999 79999998 899988876655 3 567777776666654 333344445555555555554321
Q ss_pred -------CCeec----CCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC-------------------------C-C
Q 014492 355 -------FLNPY----PSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN-------------------------K-E 397 (423)
Q Consensus 355 -------~~~~~----p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~-------------------------~-~ 397 (423)
++.+. +..++++.+.++ +.+++.+.|.++||.++..+. . .
T Consensus 226 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~gI~~~~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~ 302 (331)
T 1pff_A 226 PGLPDHPGHEIAKKQMKMFGSMIAFDVD---GLEKAKKVLDNCHVVSLAVSLGGPESLIQHPASMTHAGVPKEEREAAGL 302 (331)
T ss_dssp TTSTTSTTHHHHHHHCSSCCSEEEEECS---SHHHHHHHHHTCSSSEECSSCCSSSCEEECHHHHTSTTSCHHHHHHTTC
T ss_pred CCCCCCccHHHHHhhCCCCceEEEEEEC---CHHHHHHHHHhCCCceeccCCCCcceeeecchhhcccccCHHHHHhcCC
Confidence 11111 124678888885 577888888899998875421 0 1
Q ss_pred CCCeEEEEecChh---hHHHHHHHHhh
Q 014492 398 LKGYVRVSVGKPE---HTDALMECLMH 421 (423)
Q Consensus 398 ~~~~iRis~~~~~---~~~~l~~al~~ 421 (423)
.++++||+++... +.+++.+++++
T Consensus 303 ~~~~iRis~~~~~t~~~i~~l~~~l~~ 329 (331)
T 1pff_A 303 TDNLIRLSVGCENVQDIIDDLKQALDL 329 (331)
T ss_dssp CTTEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred CCCeEEEEEecCCHHHHHHHHHHHHHH
Confidence 1589999998543 44555555543
No 168
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.96 E-value=1.1e-28 Score=242.45 Aligned_cols=315 Identities=16% Similarity=0.111 Sum_probs=225.5
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhcC-C-C-CCCCC-------CcchHH----HHHHHHHHhCCCCCcEEEeCCHHHHHH
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQL-K-F-PYIYP-------DPESRR----LRAALAKDSGLESDHILVGCGADELID 160 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~-~~~Y~-------~~g~~~----lr~~ia~~~g~~~~~i~~t~G~~~al~ 160 (423)
..++++ .+.+++ ++++.+++.+. . . ..+|+ .+...+ +|+++++++|.+++.|++++| ++++.
T Consensus 24 ~~~~~~-~~~~~~--~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~g~~~~~i~~~sG-t~a~~ 99 (405)
T 2vi8_A 24 AKIELI-ASENFV--SRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFGAEHANVQPHSG-AQANM 99 (405)
T ss_dssp HSEECC-TTCCCC--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEECCCSSH-HHHHH
T ss_pred cceeec-cCcccC--CHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCceEEEecCc-HHHHH
Confidence 345555 445555 89999999873 2 1 22222 122334 446999999987655656777 99999
Q ss_pred HHHHHhcCCCCeEEEcCCCchhhHH-H--HHHCC--CeEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcC
Q 014492 161 LIMRCVLDPGDKIVDCPPTFTMYEF-D--AAVNG--AAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI 234 (423)
Q Consensus 161 ~~~~~l~~~gd~Vl~~~p~y~~~~~-~--~~~~g--~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~ 234 (423)
.++.+++++||.|+++.|+|+.+.. . +...| .+++.++.+ +++.+|++++++.+.+.++++|++ +|+|. |..
T Consensus 100 ~a~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~-~~~~~-~~~ 177 (405)
T 2vi8_A 100 AVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHRPKLIVA-AAAAY-PRI 177 (405)
T ss_dssp HHHHHHCCTTCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHHCCSEEEE-CCSSC-CSC
T ss_pred HHHHHhcCCCCEEEEecccccchhcccchhhhccceeEEEecccccccCCcCHHHHHHHHHhcCCeEEEE-eCCCC-Ccc
Confidence 9999999999999999999986642 1 11223 478888764 567899999999997447888887 45553 577
Q ss_pred CCHHHHHHHHcC-CCEEEEccCCccccC-CCchhhhhccCCcEEEEccChhhhc-ccCccccccccCHHHHHHHHHhcCC
Q 014492 235 INDEDLLKILEM-PILVVLDEAYTEFSG-LESRMEWVKKHDNLIVLRTFSKRAG-LAGLRVGYGAFPLSIIEYLWRAKQP 311 (423)
Q Consensus 235 ~~~~~l~~i~~~-~~~li~Deay~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~g-~~G~R~G~i~~~~~~~~~l~~~~~~ 311 (423)
.+.+++.++|+. |+++|+||+|..+.. .+.....+. ...++++|+||.++ +.| ||+++++++++.+......
T Consensus 178 ~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~--~~di~~~s~sK~~~g~~g---G~~~~~~~~~~~l~~~~~~ 252 (405)
T 2vi8_A 178 IDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVP--YAHFVTTTTHKTLRGPRG---GMILCQEQFAKQIDKAIFP 252 (405)
T ss_dssp CCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTT--TCSEEEEESSSTTCCCSC---EEEEECHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHcCCEEEEEccccccccccCcCCCccc--cCCEEEEeccccCCCCCC---eEEEEcHHHHHHHHhhhcc
Confidence 789999999987 999999999984321 111111111 22388999999987 556 9999999999888776544
Q ss_pred CC---CcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeec-C-CCceEEEEEeCC-CCCHHHHHHHH
Q 014492 312 YN---VSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPY-P-SYSNFILCEVTS-GMDAKKLKDDL 383 (423)
Q Consensus 312 ~~---~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p-~~~~~~~~~~~~-~~~~~~l~~~L 383 (423)
+. .+.....++.++++. .+++++.+++++++++++.+.|++++ +.+. | +.++++|+.++. +.+..++.+.|
T Consensus 253 ~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 331 (405)
T 2vi8_A 253 GIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNEG-FTLVSGGTDNHLLLVDLRPQQLTGKTAEKVL 331 (405)
T ss_dssp TTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTT-CEEGGGSCSSSEEEEECGGGTCCHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCC-CeEecCCCCceEEEEEccCCCCCHHHHHHHH
Confidence 32 344455555566653 35788899999999999999999884 4543 3 468899999874 45788999999
Q ss_pred HhCCcEEEeCCC------CCCCCeEEEEecC-------hhhHHHHHHHHhh
Q 014492 384 AKMGVMIRHYNN------KELKGYVRVSVGK-------PEHTDALMECLMH 421 (423)
Q Consensus 384 ~~~gI~v~~~~~------~~~~~~iRis~~~-------~~~~~~l~~al~~ 421 (423)
.++||.++++.. ...++++||+++. .++++++.++|++
T Consensus 332 ~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~ 382 (405)
T 2vi8_A 332 DEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGL 382 (405)
T ss_dssp HHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHHHH
Confidence 999999998641 2235789999984 6666666666654
No 169
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.96 E-value=5.7e-28 Score=245.22 Aligned_cols=282 Identities=14% Similarity=0.091 Sum_probs=214.7
Q ss_pred HHHHHHHHHhCCCC--CcE--EEeCCHHHHHHHHHHHhcCCC--------CeEEEcCCCchhhHHHHHHCCCeEEEecCC
Q 014492 133 RLRAALAKDSGLES--DHI--LVGCGADELIDLIMRCVLDPG--------DKIVDCPPTFTMYEFDAAVNGAAVVKVPRK 200 (423)
Q Consensus 133 ~lr~~ia~~~g~~~--~~i--~~t~G~~~al~~~~~~l~~~g--------d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~ 200 (423)
++++.+++++|.++ +++ ++|+|+++++..+++++.++| |+|+++.|+|..+...++..|++++.+|.+
T Consensus 143 ~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~~~~~~G~~v~~v~~~ 222 (514)
T 3mad_A 143 EVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFDKAAQYFGIKLVRTPLD 222 (514)
T ss_dssp HHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHHHHHHHTCEEEEECBC
T ss_pred HHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHHHHHHcCCeeEEeeeC
Confidence 45666788888764 677 999999999999999988776 899999999999999999999999999988
Q ss_pred CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCC-----Cc--hhhhhccC
Q 014492 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGL-----ES--RMEWVKKH 272 (423)
Q Consensus 201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~-----~~--~~~~~~~~ 272 (423)
.++.+|+++|+++++ .++++|++++|+||||.+.+.++|.+||+. |++||+||+|.++... +. ........
T Consensus 223 ~~~~~d~~~Le~~i~-~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~~~~~~~~ 301 (514)
T 3mad_A 223 ADYRADVAAMREAIT-PNTVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPVPPFDFRLE 301 (514)
T ss_dssp TTSCBCHHHHHHHCC-TTEEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCCCCSTTST
T ss_pred CCCCCCHHHHHHHhc-cCCEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEecccccccchhHHhcCCCCCcccccCC
Confidence 888999999999997 689999999999999999999999999998 9999999999976431 00 00111123
Q ss_pred CcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC-------------CCCCcHH---HHHHHHHHhCChHHHHHHH
Q 014492 273 DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ-------------PYNVSVA---AEVAACAALQNPIYLEKVK 336 (423)
Q Consensus 273 ~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~-------------~~~~~~~---~~~a~~~~l~~~~~~~~~~ 336 (423)
+.++++.|++|.+ .+|.++|+++++++.......... ..+.+.. ++.++...+. .+++++..
T Consensus 302 g~d~~~~s~~K~l-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~~~~~~~a~~aal~~l~-~~~~~~~~ 379 (514)
T 3mad_A 302 GVTSVSADTHKYG-YGAKGTSVILYRRPDLLHYQYFIAADWPGGLYFSPTFAGSRPGALSATAWAAMLSLG-EEGYLDAT 379 (514)
T ss_dssp TCCEEEECTTTTT-CCCSSCEEEEESSHHHHTTTCEEESSCTTCSEEESSSCSSCCHHHHHHHHHHHHHHH-HHHHHHHH
T ss_pred CCcEEEECchhcc-CCCCCeEEEEEeCHHHhccccccccccCCCcccCCccCCCCchHHHHHHHHHHHHHh-HHHHHHHH
Confidence 4568889999975 478899999887765543221110 1122333 3333333332 35578889
Q ss_pred HHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec----ChhhH
Q 014492 337 EALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG----KPEHT 412 (423)
Q Consensus 337 ~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~----~~~~~ 412 (423)
+++.++++++.+.|++++++.+.+...+++++..+ +.+..++.+.|.++||.+.... .++++|++++ ..+++
T Consensus 380 ~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~-~~~~~~l~~~L~~~Gi~v~g~~---~~~~~Ri~~~~~~~~~e~i 455 (514)
T 3mad_A 380 RRILQAADRLKAGVRAIPSLKILGDPLWVIAVASD-ELNIYQVMEEMAGRGWRLNGLH---RPPAFHVALTLRHTEPGVV 455 (514)
T ss_dssp HHHHHHHHHHHHHHHTSTTCEESSCCSSEEEEECS-SSCHHHHHHHHHTTTCBCEEET---TTTEEEEECCGGGGSTTHH
T ss_pred HHHHHHHHHHHHHHhhCCCeEEeCCCeEEEEEeCC-CCCHHHHHHHHHhcCCEeccCC---CCCeEEEEEecCCCCHHHH
Confidence 99999999999999998767765544567777764 5788999999999999884332 2578999987 33556
Q ss_pred HHHHHHHhh
Q 014492 413 DALMECLMH 421 (423)
Q Consensus 413 ~~l~~al~~ 421 (423)
+++.++|++
T Consensus 456 ~~~l~~L~~ 464 (514)
T 3mad_A 456 DRFLADLQD 464 (514)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666666554
No 170
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.96 E-value=6.3e-28 Score=238.49 Aligned_cols=316 Identities=13% Similarity=0.143 Sum_probs=212.7
Q ss_pred CeeEcCCCCCCCCCCHHHHHHHhcCC---CCCCCC------Ccc----hHH-HHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492 96 DIVKIDANENPYGPPPEVREALGQLK---FPYIYP------DPE----SRR-LRAALAKDSGLESDHILVGCGADELIDL 161 (423)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~~---~~~~Y~------~~g----~~~-lr~~ia~~~g~~~~~i~~t~G~~~al~~ 161 (423)
+.+++..+++.. +|++.+++.+.. +..+|+ ... ..+ .++.+++++|.+.. .++++|+++++..
T Consensus 33 ~~i~l~~~~~~~--~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~-~v~~~~Gs~a~~~ 109 (425)
T 3ecd_A 33 SQVELIASENIV--SRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIERVKRLFNAGHA-NVQPHSGAQANGA 109 (425)
T ss_dssp HSEECCTTCCCC--CHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHHHHHHHTCSEE-ECCCSSHHHHHHH
T ss_pred cceeeecccCCC--CHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHHHHHHhCCCCc-eeecCchHHHHHH
Confidence 458998888766 799999998632 112222 111 122 34667788887643 2457788889999
Q ss_pred HHHHhcCCCCeEEEcCCCchh---hHHHHHHCCC--eEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCC
Q 014492 162 IMRCVLDPGDKIVDCPPTFTM---YEFDAAVNGA--AVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII 235 (423)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~---~~~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~ 235 (423)
++.+++++||+|+++.|+|.. +.......|. +++.++.+ +++.+|++++++.+.+.++++|++++|+|| ...
T Consensus 110 al~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~--~~~ 187 (425)
T 3ecd_A 110 VMLALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSRDTMLIDYDQVEALAQQHKPSLIIAGFSAYP--RKL 187 (425)
T ss_dssp HHHHHCCTTCEEEEECC------------------CEEEEECCCTTTSSCCHHHHHHHHHHHCCSEEEEECSCCC--SCC
T ss_pred HHHHccCCCCEEEEcccccccceecchhhhhcccceeeeecCCCcccCccCHHHHHHHHhhcCCcEEEEccccCC--CcC
Confidence 999999999999999999986 3222223444 55666654 457899999999997568999999999995 567
Q ss_pred CHHHHHHHHcC-CCEEEEccCCcc-ccCCCchhhhhccCCcEEEEccChhhhcccCccccccccC-HHHHHHHHHhcCCC
Q 014492 236 NDEDLLKILEM-PILVVLDEAYTE-FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQPY 312 (423)
Q Consensus 236 ~~~~l~~i~~~-~~~li~Deay~~-~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~-~~~~~~l~~~~~~~ 312 (423)
+.+++.++|+. |++||+||+|.. +.+.+........ ..+++.|+||.+ +|.|.||++++ +++.+.+.......
T Consensus 188 ~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~~--~di~~~s~sK~l--~g~~~g~~~~~~~~~~~~~~~~~~~~ 263 (425)
T 3ecd_A 188 DFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEH--AHVVTSTTHKTL--RGPRGGFVLTNDEEIAKKINSAVFPG 263 (425)
T ss_dssp CHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGT--CSEEEEESSGGG--CCCSCEEEEESCHHHHHHHHHHHC--
T ss_pred CHHHHHHHHHHcCCEEEEECcChHhhhhcccccCchhc--CcEEEecCCccc--CCCCcEEEEeCCHHHHHHHHhhhCcc
Confidence 88999999987 999999999643 2222221111211 238899999976 67899999998 56777776654442
Q ss_pred ---CCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeec--CCCceEEEEEeCC-CCCHHHHHHHHH
Q 014492 313 ---NVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPY--PSYSNFILCEVTS-GMDAKKLKDDLA 384 (423)
Q Consensus 313 ---~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~--p~~~~~~~~~~~~-~~~~~~l~~~L~ 384 (423)
+.+...+.++..++.. .+++++.+++++++++++.+.|++.++ .+. ++.++++|+.+++ +.+...+.+.|.
T Consensus 264 ~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 342 (425)
T 3ecd_A 264 LQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAGGV-DLVTGGTDNHLLLVDLRPKGLKGAQVEQALE 342 (425)
T ss_dssp ---CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTC-EEGGGSCSSSEEEEECGGGTCCHHHHHHHHH
T ss_pred ccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhCCC-eeccCCCCceEEEEEeCCCCCCHHHHHHHHH
Confidence 3444444444444432 356788889999999999999988763 433 2567889998864 567888889998
Q ss_pred hCCcEEEeCCC------CCCCCeEEEEec-------ChhhHHHHHHHHhh
Q 014492 385 KMGVMIRHYNN------KELKGYVRVSVG-------KPEHTDALMECLMH 421 (423)
Q Consensus 385 ~~gI~v~~~~~------~~~~~~iRis~~-------~~~~~~~l~~al~~ 421 (423)
++||.++++.. +...+++||++. ..++++++.++|++
T Consensus 343 ~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~ 392 (425)
T 3ecd_A 343 RAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILE 392 (425)
T ss_dssp HTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HcCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHHHHHH
Confidence 99999994332 223468999853 24566666666654
No 171
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.96 E-value=1.6e-28 Score=243.27 Aligned_cols=312 Identities=18% Similarity=0.104 Sum_probs=216.4
Q ss_pred CCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCC--CCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHH
Q 014492 92 RKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF--PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC 165 (423)
Q Consensus 92 ~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~--~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~ 165 (423)
..++.++||..+. ++++ ++|++.+++.+ +.. .++|+.....++++.++++++ .+++|++++|+++++..+++.
T Consensus 49 ~~g~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~g~ea~~~al~~ 127 (424)
T 2e7u_A 49 ADGNRYLDYVMSWGPLILGHAHPKVLARVRETLERGLTFGAPSPLEVALAKKVKRAYP-FVDLVRFVNSGTEATMSALRL 127 (424)
T ss_dssp TTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCSCCSSCCHHHHHHHHHHHHHCT-TCCEEEEESSHHHHHHHHHHH
T ss_pred CCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHhCC-CCCEEEEeCCHHHHHHHHHHH
Confidence 4567789998775 5555 58999988876 322 234565556789999999986 678999999999999999985
Q ss_pred ---hcCCCCeEEEcCCCchhhHHHHH--------------HCCC------eEEEecCCCCCCCCHHHHHHHhhc--CCce
Q 014492 166 ---VLDPGDKIVDCPPTFTMYEFDAA--------------VNGA------AVVKVPRKSDFSLNVELIADAVER--EKPK 220 (423)
Q Consensus 166 ---l~~~gd~Vl~~~p~y~~~~~~~~--------------~~g~------~~~~v~~~~~~~~d~~~l~~~i~~--~~~~ 220 (423)
+.+ ++.|++.+|+|+.+...+. ..|+ .++.+|. .|++++++.+++ .+++
T Consensus 128 ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~ 201 (424)
T 2e7u_A 128 ARGYTG-RPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY-----NDPEGLREVLKRRGEEIA 201 (424)
T ss_dssp HHHHHC-CCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT-----TCHHHHHHHHHHHGGGEE
T ss_pred HHHhhC-CCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC-----CCHHHHHHHHHhCCCCEE
Confidence 444 5789999999986543221 1122 3555552 389999998863 3455
Q ss_pred EEEEcCCCCC-cCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch-hhhhccCCcEEEEccChhhhcccCcccc
Q 014492 221 CIFLTSPNNP-DGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR-MEWVKKHDNLIVLRTFSKRAGLAGLRVG 293 (423)
Q Consensus 221 ~i~l~~p~NP-tG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~-~~~~~~~~~~i~i~S~SK~~g~~G~R~G 293 (423)
+|+ ++|+|+ ||.+.+ .+++.++ +. |++||+||+|.+|..+... ....+...++ .||||.+| +|+|+|
T Consensus 202 ~vi-~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~~~g~~~~~~~~~~~~di---~s~sK~l~-~G~~~G 275 (424)
T 2e7u_A 202 AII-FEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGFRLAFGGATELLGLKPDL---VTLGKILG-GGLPAA 275 (424)
T ss_dssp EEE-ECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTTTSSTTHHHHHHTCCCSE---EEECGGGG-TTSSCE
T ss_pred EEE-EeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCccccccchhHHHHHhCCCcch---hhhhhhhh-CCcceE
Confidence 555 556554 998876 6666777 66 9999999999987432211 1222223333 38999999 699999
Q ss_pred ccccCHHHHHHHHHh-----cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccC----CCCeecCCCce
Q 014492 294 YGAFPLSIIEYLWRA-----KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDV----PFLNPYPSYSN 364 (423)
Q Consensus 294 ~i~~~~~~~~~l~~~-----~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~p~~~~ 364 (423)
|+++++++++.+... ...|+.|++++.++.++|+..+..++..++++++++++.+.|+++ +.....++.|+
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~ 355 (424)
T 2e7u_A 276 AYAGRREIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELLEENPGYYAYLEDLGARLEAGLKEVLKEKGLPHTVNRVGS 355 (424)
T ss_dssp EEEECHHHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETT
T ss_pred EEEEcHHHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeece
Confidence 999999998877652 234678899999888888642212456777778888888877664 54333456788
Q ss_pred EEEEEeCCC-------------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHh
Q 014492 365 FILCEVTSG-------------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLM 420 (423)
Q Consensus 365 ~~~~~~~~~-------------~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~ 420 (423)
|+|+++++. .+..++.+.|.++||.+++++. ..+|+++. +.++++++.++|+
T Consensus 356 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~----~~~~~~~~~t~~~i~~~l~~l~ 421 (424)
T 2e7u_A 356 MITVFFTEGPVVTFQDARRTDTELFKRFFHGLLDRGIYWPPSNF----EAAFLSVAHREEDVEKTLEALR 421 (424)
T ss_dssp EEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHTTTEECCSSSS----SCEECCTTCCHHHHHHHHHHHH
T ss_pred EEEEEEeCCCCcchhhhcccCHHHHHHHHHHHHHCCeEEeccCC----CceEeeccCCHHHHHHHHHHHH
Confidence 999998641 1256788889999999998752 35777754 3444444444444
No 172
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.96 E-value=5e-28 Score=238.83 Aligned_cols=316 Identities=14% Similarity=0.122 Sum_probs=216.7
Q ss_pred CeeEcCCCCCCCCCCHHHHHHHhcCC---CCCCCCC------cc-----hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492 96 DIVKIDANENPYGPPPEVREALGQLK---FPYIYPD------PE-----SRRLRAALAKDSGLESDHILVGCGADELIDL 161 (423)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~~---~~~~Y~~------~g-----~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~ 161 (423)
+.+.+..+++. .+|++.+++.+.. ...+|+. .. ....++.+++++|+++++|++++| ++++..
T Consensus 31 ~~~~~~~~~n~--~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~v~~~sG-s~a~~~ 107 (420)
T 3gbx_A 31 EHIELIASENY--TSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHSG-SQANFA 107 (420)
T ss_dssp HSEECCTTCCC--CCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHTCSEEECCCSSH-HHHHHH
T ss_pred cceeeeccCCC--CCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhCCCCceeEecCc-HHHHHH
Confidence 34777777665 5899999997631 1123322 11 123456888899998777877777 679999
Q ss_pred HHHHhcCCCCeEEEcCCCchhhH---HHHHH--CCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCC
Q 014492 162 IMRCVLDPGDKIVDCPPTFTMYE---FDAAV--NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236 (423)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~---~~~~~--~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~ 236 (423)
++.+++++||+|+++.|+|..+. ..... .+...+.++.+.++.+|++++++++.+.++++|++++|+|| ...+
T Consensus 108 a~~~~~~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~--~~~~ 185 (420)
T 3gbx_A 108 VYTALLQPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGIDESGKIDYDEMAKLAKEHKPKMIIGGFSAYS--GVVD 185 (420)
T ss_dssp HHHHHCCTTCEEEEEEEC------------CHHHHSEEEEEEECTTCSCCHHHHHHHHHHHCCSEEEECCTTCC--SCCC
T ss_pred HHHHhcCCCCEEEecchhhcceeccchhhhhcccceeEEeccCCccCCcCHHHHHHHHHhcCCeEEEEecCccC--CccC
Confidence 99999999999999999997633 21112 34566677766777899999999997557999999999997 4788
Q ss_pred HHHHHHHHcC-CCEEEEccCCcccc-CCCchhhhhccCCcEEEEccChhhhcccCccccccccCH---HHHHHHHHhcCC
Q 014492 237 DEDLLKILEM-PILVVLDEAYTEFS-GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL---SIIEYLWRAKQP 311 (423)
Q Consensus 237 ~~~l~~i~~~-~~~li~Deay~~~~-~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~---~~~~~l~~~~~~ 311 (423)
.+++.++|+. |+++|+||+|.... ..+...... ....+++.|+||.++ |.+.||+++++ ++.+.+.....+
T Consensus 186 l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~--~~~di~~~s~sK~~~--g~~gg~~~~~~~~~~~~~~~~~~~~~ 261 (420)
T 3gbx_A 186 WAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPV--PHAHVVTTTTHKTLA--GPRGGLILAKGGDEELYKKLNSAVFP 261 (420)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCST--TTSSEEEEESSGGGC--SCSCEEEEESSCCHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHcCCEEEEECCcchhceecccCCccc--ccCCEEEeecccCCC--CCCceEEEEcCCcHHHHHHhhhhcCC
Confidence 9999999987 99999999986332 111111111 123488999999884 55669999987 777777665444
Q ss_pred C---CCcHHHHHHHHHHhC-C-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecC--CCceEEEEEeCC-CCCHHHHHHHH
Q 014492 312 Y---NVSVAAEVAACAALQ-N-PIYLEKVKEALIKERERLFKLLKDVPFLNPYP--SYSNFILCEVTS-GMDAKKLKDDL 383 (423)
Q Consensus 312 ~---~~~~~~~~a~~~~l~-~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p--~~~~~~~~~~~~-~~~~~~l~~~L 383 (423)
+ +.+...+.++..++. . .+++++.+++++++++++.+.|++.+ +.+.+ ..++++|+.++. +.+...+.+.|
T Consensus 262 ~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 340 (420)
T 3gbx_A 262 SAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNRG-YKVVSGGTENHLFLLDLVDKNLTGKEADAAL 340 (420)
T ss_dssp ---CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHTT-CEEGGGSCSSSEEEEECGGGTCCHHHHHHHH
T ss_pred CCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhcC-CeeccCCCCCeEEEEEcCCCCCCHHHHHHHH
Confidence 2 334444444443332 2 45678889999999999999998865 44433 578899998863 56788888889
Q ss_pred HhCCcEEEeCC------CCCCCCeEEEEecC-------hhhHHHHHHHHhh
Q 014492 384 AKMGVMIRHYN------NKELKGYVRVSVGK-------PEHTDALMECLMH 421 (423)
Q Consensus 384 ~~~gI~v~~~~------~~~~~~~iRis~~~-------~~~~~~l~~al~~ 421 (423)
.++||.+.+.. .+...+.+||++.. .++++++.++|++
T Consensus 341 ~~~gi~v~~~~~~~~~~~~~~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~ 391 (420)
T 3gbx_A 341 GRANITVNKNSVPNDPKSPFVTSGIRIGSPAVTRRGFKEAEVKELAGWMCD 391 (420)
T ss_dssp HHTTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHCCcEeccccCCCCccccCCCcceEEecchhcccCCCHHHHHHHHHHHHH
Confidence 89999999821 12234569999852 4556666666654
No 173
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.96 E-value=3.3e-28 Score=241.17 Aligned_cols=318 Identities=17% Similarity=0.133 Sum_probs=216.3
Q ss_pred CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCCC--CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHH
Q 014492 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (423)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~--~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~ 164 (423)
+..+++++|+..+. ++++ .+|++.+++.+ +... +.|+++...+++++++++++ ++++|++++|+++++..+++
T Consensus 48 d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~~v~~~~ggsea~~~al~ 126 (427)
T 3fq8_A 48 DVDGNRYIDYVGTWGPAICGHAHPEVIEALKVAMEKGTSFGAPCALENVLAEMVNDAVP-SIEMVRFVNSGTEACMAVLR 126 (427)
T ss_dssp ETTSCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSCCSSCCHHHHHHHHHHHHHST-TCSEEEEESSHHHHHHHHHH
T ss_pred ECCCCEEEECCCchhhhccCCCCHHHHHHHHHHHHhCCCcCCCCHHHHHHHHHHHHhCC-CCCEEEEeCCHHHHHHHHHH
Confidence 34567899998875 5666 48999998876 3222 33555567789999999998 78899999999999999995
Q ss_pred Hhc--CCCCeEEEcCCCchhhHHHHHHC-CC-------------------eEEEecCCCCCCCCHHHHHHHhhcC--Cce
Q 014492 165 CVL--DPGDKIVDCPPTFTMYEFDAAVN-GA-------------------AVVKVPRKSDFSLNVELIADAVERE--KPK 220 (423)
Q Consensus 165 ~l~--~~gd~Vl~~~p~y~~~~~~~~~~-g~-------------------~~~~v~~~~~~~~d~~~l~~~i~~~--~~~ 220 (423)
... ..++.|++..|+|+.+...+... |. .++.+|. -|++++++.+++. +++
T Consensus 127 ~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~ 201 (427)
T 3fq8_A 127 IMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPY-----NDLEAVKALFAENPGEIA 201 (427)
T ss_dssp HHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEET-----TCHHHHHHHHHHSTTTEE
T ss_pred HHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCC-----CCHHHHHHHHHhCCCCEE
Confidence 321 23578999999997533222111 11 1333332 1899999998742 678
Q ss_pred EEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCcccccc
Q 014492 221 CIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYG 295 (423)
Q Consensus 221 ~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i 295 (423)
+|+++.++|++|.+.+ .+++.++|+. |++||+||+|.+| ..+.. ......+...-+.|+||.++ +|+|+||+
T Consensus 202 ~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~-~~~~~~~~~~di~t~sK~~~-~G~~~G~~ 278 (427)
T 3fq8_A 202 GVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAYG-GVQEKFGVTPDLTTLGKIIG-GGLPVGAY 278 (427)
T ss_dssp EEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBTT-HHHHHTTCCCSEEEECGGGG-TTSSCEEE
T ss_pred EEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcc-hhhHhcCCCCChhhhhhhhh-CCcceEEE
Confidence 8888888889999998 7888888876 9999999999988 43321 11111111122458899999 89999999
Q ss_pred ccCHHHHHHHHHh-----cCCCCCcHHHHHHHHHHhC---ChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEE
Q 014492 296 AFPLSIIEYLWRA-----KQPYNVSVAAEVAACAALQ---NPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFIL 367 (423)
Q Consensus 296 ~~~~~~~~~l~~~-----~~~~~~~~~~~~a~~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~ 367 (423)
++++++++.+... ..+++.+++++.++.++|+ ++++.++.++..+..++.+.+.+.+.+.....++.+++++
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~ 358 (427)
T 3fq8_A 279 GGKREIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMFG 358 (427)
T ss_dssp EECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEE
T ss_pred EEcHHHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeeeEEE
Confidence 9999999887652 2346779999998888885 2334444444444444444444444554334456788999
Q ss_pred EEeCCC-CC------------HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHhh
Q 014492 368 CEVTSG-MD------------AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLMH 421 (423)
Q Consensus 368 ~~~~~~-~~------------~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~~ 421 (423)
+.+++. .. ..++.+.|.++||.+++++. ..+|+++. +.++++++.++|++
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gi~v~~~~~----~r~~~~~~~t~e~i~~~l~~l~~ 422 (427)
T 3fq8_A 359 FFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQGIYLAPSQF----EAGFTSLAHTEEDIDATLAAART 422 (427)
T ss_dssp EESSSCCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTT----SCEECCTTCCHHHHHHHHHHHHH
T ss_pred EEEecCccccccccccccHHHHHHHHHHHHHCCcEEecCCC----CCEEeeCcCCHHHHHHHHHHHHH
Confidence 988632 11 45788899999999998763 34555544 44455555555543
No 174
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.96 E-value=9.9e-29 Score=246.72 Aligned_cols=326 Identities=15% Similarity=0.120 Sum_probs=214.8
Q ss_pred CCCCCCeeEcCCC--CCCCCC-CHHHHHHHhc-CCCC-----CCCCCcchHHHHHHHHHHhCCC-CCcEEEeCCHHHHHH
Q 014492 91 GRKPEDIVKIDAN--ENPYGP-PPEVREALGQ-LKFP-----YIYPDPESRRLRAALAKDSGLE-SDHILVGCGADELID 160 (423)
Q Consensus 91 ~~~~~~~i~l~~~--~~~~~~-~~~v~~al~~-~~~~-----~~Y~~~g~~~lr~~ia~~~g~~-~~~i~~t~G~~~al~ 160 (423)
+.+++.++|+..+ .+.++. +|++.+++.+ +... ..|+.....+|.+.+++.++.. .++|++|+|+++++.
T Consensus 57 d~~g~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~ 136 (451)
T 3oks_A 57 DVDGNRLIDLGSGIAVTTVGNSAPKVVEAVRSQVGDFTHTCFMVTPYEGYVAVCEQLNRLTPVRGDKRSALFNSGSEAVE 136 (451)
T ss_dssp ETTSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHTTCSCCTTTTSCCHHHHHHHHHHHHHSSCCSSEEEEEESSHHHHHH
T ss_pred ECCCCEEEEcCCCccccccCCCCHHHHHHHHHHHHhcccccCCccCCHHHHHHHHHHHHhCCcCCCCEEEEeCcHHHHHH
Confidence 3456789999887 667765 7899988876 2221 1234445568888898888753 579999999999999
Q ss_pred HHHHHhcC--CCCeEEEcCCCchhhHHHHHHCCC--------------eEEEecCCCCC-----CC--------CHHHHH
Q 014492 161 LIMRCVLD--PGDKIVDCPPTFTMYEFDAAVNGA--------------AVVKVPRKSDF-----SL--------NVELIA 211 (423)
Q Consensus 161 ~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~--------------~~~~v~~~~~~-----~~--------d~~~l~ 211 (423)
.+++.... .++.|++..++|+.+...+...+. .+..+|.+..+ +. +++.++
T Consensus 137 ~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 216 (451)
T 3oks_A 137 NAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAI 216 (451)
T ss_dssp HHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHH
T ss_pred HHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHH
Confidence 99986653 348899999999866655443321 35555543110 11 244444
Q ss_pred HHhhc---CCceEEEEcCCCCC-cCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEEEcc
Q 014492 212 DAVER---EKPKCIFLTSPNNP-DGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRT 280 (423)
Q Consensus 212 ~~i~~---~~~~~i~l~~p~NP-tG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S 280 (423)
+.+.+ .+..+++++.|.|+ .|.+.+ ++++.++|+. |++||+||+|.+|...+.. ....+..+.++ |
T Consensus 217 ~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~---t 293 (451)
T 3oks_A 217 TVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMFACEHEGIDPDLI---V 293 (451)
T ss_dssp HHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE---E
T ss_pred HHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccchhhhhcCCCCCee---e
Confidence 44431 23344444555544 455555 5667777776 9999999999988643322 12222223333 8
Q ss_pred ChhhhcccCccccccccCHHHHHHHHHh--cCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCC
Q 014492 281 FSKRAGLAGLRVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPF 355 (423)
Q Consensus 281 ~SK~~g~~G~R~G~i~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~ 355 (423)
|||.++ .|+|+||+++++++++.+... ...|+.+++++.++.++|+. +++.++.++..+..++.|.+.+++++.
T Consensus 294 ~sK~l~-~G~~iG~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 372 (451)
T 3oks_A 294 TAKGIA-GGLPLSAVTGRAEIMDSPHVSGLGGTYGGNPIACAAALATIETIESEGLVARAQQIEKIMKDRLGRLQAEDDR 372 (451)
T ss_dssp ECGGGG-TTSSCEEEEEEHHHHTCSCTTSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred ehhhhh-CCcceEEEEECHHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 899998 499999999999998877643 33478899999999988863 234444444444555555555555665
Q ss_pred CeecCCCceEEEEEeC-------CCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492 356 LNPYPSYSNFILCEVT-------SGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 356 ~~~~p~~~~~~~~~~~-------~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l 422 (423)
+...++.|.|+++.+. +..+..++.+.|.++||.+++++. ..+++||+++...+.+++++++++|
T Consensus 373 ~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~--~~~~iRi~~~~~~t~e~i~~~l~~l 444 (451)
T 3oks_A 373 IGDVRGRGAMIAMELVKAGTTEPDADLTKALCAGAHAAGVIVLSCGT--YGNVVRFLPPLSIGDDLLNEGLDVL 444 (451)
T ss_dssp EEEEEEETTEEEEEEBSTTSCCBCHHHHHHHHHHHHHTTEECEEECT--TSCEEEECCCTTCCHHHHHHHHHHH
T ss_pred eEEEEEeeEEEEEEEecCccCCCCHHHHHHHHHHHHhCCcEEecCCC--CCCEEEEECCCCCCHHHHHHHHHHH
Confidence 5555667889998883 222467788999999999998753 2478999876433334555555543
No 175
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.96 E-value=7.5e-27 Score=228.69 Aligned_cols=276 Identities=16% Similarity=0.139 Sum_probs=208.4
Q ss_pred CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHH----HHHCCCeEEEecCC
Q 014492 125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRK 200 (423)
Q Consensus 125 ~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~ 200 (423)
+|+++...++++++++++|.+ +.++++++++++..++.+++++||+|+++.|+|..+... ++..|++++.++.
T Consensus 55 ~~~~~~~~~l~~~la~~~g~~--~~i~~~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~- 131 (389)
T 3acz_A 55 RLGNPTVEQFEEMVCSIEGAA--GSAAFGSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLIDT- 131 (389)
T ss_dssp TTCCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEECT-
T ss_pred CCCChHHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECC-
Confidence 456777889999999999975 455566667999999998899999999999999875554 5778999999985
Q ss_pred CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEc
Q 014492 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR 279 (423)
Q Consensus 201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~ 279 (423)
.|++++++.++ +++++|++++|+||||.+++.+++.++|+. |+++|+|++|..+.... .. ..+.++++.
T Consensus 132 ----~d~~~l~~~i~-~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD~~~~~~~~~~-~~----~~~~di~~~ 201 (389)
T 3acz_A 132 ----SDVEKVKAAWK-PNTKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVDATFTSPCFLK-PL----ELGADIALH 201 (389)
T ss_dssp ----TCHHHHHHTCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTCC-GG----GTTCSEEEE
T ss_pred ----CCHHHHHHhcC-CCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccccC-cc----ccCCeEEEE
Confidence 48999999997 689999999999999999999999999998 99999999998765422 22 145669999
Q ss_pred cChhhhcccCccc-cccccCH-HHHHHHHHhcC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCC
Q 014492 280 TFSKRAGLAGLRV-GYGAFPL-SIIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPF 355 (423)
Q Consensus 280 S~SK~~g~~G~R~-G~i~~~~-~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 355 (423)
|+||.++.+|.|+ ||+++++ ++++.+..... ..+.++..+.++...++. +....++..++.+.+.+.|++.+.
T Consensus 202 S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~---l~~r~~~~~~~~~~l~~~l~~~~~ 278 (389)
T 3acz_A 202 SVSKYINGHGDVIGGVSSAKTAEDIATIKFYRKDAGSLMAPMDAFLCARGMKT---LPIRMQIHMENGLKVAKFLEQHEK 278 (389)
T ss_dssp ETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred CChhhccCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcCccH---HHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999998 9999998 88888876553 345677777777777754 233444555666677777766532
Q ss_pred Ce-e-c----------------CCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCC---------CC------------
Q 014492 356 LN-P-Y----------------PSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYN---------NK------------ 396 (423)
Q Consensus 356 ~~-~-~----------------p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~---------~~------------ 396 (423)
+. + + .+.++++.+.++ + .+++.+.|.+.||.++..+ .+
T Consensus 279 v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~-~--~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~ 355 (389)
T 3acz_A 279 IVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMK-S--FEAAKKLMEHLKVCTLAVSLGCVDTLIEHPASMTHAAVPENI 355 (389)
T ss_dssp EEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEES-S--HHHHHHHHTTCSSSEEBSCCCCSSCEEECTTTTTTSSSCHHH
T ss_pred eeEEECCCCCCCccHHHHHhhCCCCCeEEEEEEC-C--HHHHHHHHHhCCCcEECcCCCCcccEeeCCcccccccCCHHH
Confidence 21 0 1 123678888886 2 5666666778899887631 11
Q ss_pred -----CCCCeEEEEecChhhHHHHHHHHh
Q 014492 397 -----ELKGYVRVSVGKPEHTDALMECLM 420 (423)
Q Consensus 397 -----~~~~~iRis~~~~~~~~~l~~al~ 420 (423)
..+++||||++.++ .+++.+.++
T Consensus 356 ~~~~g~~~~~iRlsvg~~~-~~~li~~l~ 383 (389)
T 3acz_A 356 MRKQGITPELVRISVGIEN-VDDIIADLK 383 (389)
T ss_dssp HHHHTCCTTEEEEECCSSC-HHHHHHHHH
T ss_pred HHhcCCCcCeEEEEeccCC-HHHHHHHHH
Confidence 11579999999764 455555444
No 176
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.96 E-value=2.6e-27 Score=236.51 Aligned_cols=310 Identities=14% Similarity=0.038 Sum_probs=224.9
Q ss_pred CCCHHHHHHHhc-CCC-CCCC-CCcch----HHHHHHHHHHhCCCCCc-----EEEeCCHHHHHHHHHHHhcC-------
Q 014492 108 GPPPEVREALGQ-LKF-PYIY-PDPES----RRLRAALAKDSGLESDH-----ILVGCGADELIDLIMRCVLD------- 168 (423)
Q Consensus 108 ~~~~~v~~al~~-~~~-~~~Y-~~~g~----~~lr~~ia~~~g~~~~~-----i~~t~G~~~al~~~~~~l~~------- 168 (423)
.++|.+.+++.+ +.. ...| ..++. .++++.+++++|++.++ +++|+|+++++.+++.+++.
T Consensus 53 ~~~~~v~e~~~~a~~~~~~~~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~ 132 (452)
T 2dgk_A 53 WDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRME 132 (452)
T ss_dssp CCCHHHHHHHHHTTTCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHhccCCCChhhChhHHHHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHH
Confidence 345788888875 322 1223 23343 35666678888987765 99999999999999887754
Q ss_pred -CC-----CeEEEcCCCchhhHHHHHHCCCeEEEecCCC-CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHH
Q 014492 169 -PG-----DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL 241 (423)
Q Consensus 169 -~g-----d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~ 241 (423)
+| +.|+++. +|..+...++..|++++.+|.++ ++.+|+++|+++++ +++++|++++|+||||.+.+.++|.
T Consensus 133 ~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~-~~t~~v~~~~~~n~tG~~~~l~~I~ 210 (452)
T 2dgk_A 133 AAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACD-ENTIGVVPTFGVTYTGNYEFPQPLH 210 (452)
T ss_dssp HTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEECCCBTTBCSCCHHHHHHHCC-TTEEEEECBBSCTTTCBBCCHHHHH
T ss_pred hcCCCCCCcEEEECC-CcHHHHHHHHHcCceEEEEecCCCCCeECHHHHHHHHh-hCCEEEEEEcCCcCCcccCCHHHHH
Confidence 55 5899999 99999999999999999999765 68999999999997 6899999999999999999999999
Q ss_pred HHHcC-------CCEEEEccCCccccC---CCchhhhhccCCcEEEEccChhhhcccCccccccccCH-HHH-HHHHHhc
Q 014492 242 KILEM-------PILVVLDEAYTEFSG---LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL-SII-EYLWRAK 309 (423)
Q Consensus 242 ~i~~~-------~~~li~Deay~~~~~---~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~-~~~-~~l~~~~ 309 (423)
++|+. ++++++|++|..+.. .+.........+-..++.|++| |+++|.++||+++++ +.+ +.+....
T Consensus 211 ~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~hK-~~~~~~~~G~~~~~~~~~~~~~~~~~~ 289 (452)
T 2dgk_A 211 DALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHK-FGLAPLGCGWVIWRDEEALPQELVFNV 289 (452)
T ss_dssp HHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTT-TTCCCSSCEEEEESSGGGSCGGGCEEE
T ss_pred HHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhcCCCCCcEEEECccc-ccCCCCCeEEEEEcCHHHHHHHhccCc
Confidence 99986 899999999997642 1111111112234567788899 777899999999854 333 3321111
Q ss_pred CC-----------CCC---cHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeec-C----CCceEEEEEe
Q 014492 310 QP-----------YNV---SVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPY-P----SYSNFILCEV 370 (423)
Q Consensus 310 ~~-----------~~~---~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p----~~~~~~~~~~ 370 (423)
.. ++. ..+.+.++...+. .+.+++..++..++++++.+.|++++++.+. | ...+++.+++
T Consensus 290 ~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~~~~v~f~~ 368 (452)
T 2dgk_A 290 DYLGGQIGTFAINFSRPAGQVIAQYYEFLRLG-REGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKL 368 (452)
T ss_dssp CCTTCCEEECCSCCSCBCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTTSSEEEEEECCTTTBSSEEEEEE
T ss_pred cccCCCCCCcccCCCChhHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCCeEEEEEEe
Confidence 10 111 3344555555553 3557888899999999999999998765543 3 4567888888
Q ss_pred CCC----CCHHHHHHHHHhCCcEEEeCCC---CCCCCeEEEEecC---hhhHHHHHHHHhh
Q 014492 371 TSG----MDAKKLKDDLAKMGVMIRHYNN---KELKGYVRVSVGK---PEHTDALMECLMH 421 (423)
Q Consensus 371 ~~~----~~~~~l~~~L~~~gI~v~~~~~---~~~~~~iRis~~~---~~~~~~l~~al~~ 421 (423)
++. .+..++.+.|.++||.++.+.. ....+++||+++. .++++++.++|++
T Consensus 369 ~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRis~~~~~t~e~id~li~~l~~ 429 (452)
T 2dgk_A 369 KDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKA 429 (452)
T ss_dssp CTTCCCSCCHHHHHHHHHHTTCBCCEEECSTTCTTCEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred cCcccccCCHHHHHHHHHhcCCeeeeeeCCcccCCeEEEEEEecCCCCHHHHHHHHHHHHH
Confidence 642 3568999999999997654322 1235699999975 4667777777765
No 177
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.96 E-value=2.2e-28 Score=243.02 Aligned_cols=313 Identities=17% Similarity=0.110 Sum_probs=218.0
Q ss_pred CCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCC--CCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHH
Q 014492 92 RKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF--PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC 165 (423)
Q Consensus 92 ~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~--~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~ 165 (423)
..++.++||..+. ++++ .+|++.+++.+ +.. ..+|+.....++++.++++++ .+++|++++|+++++..+++.
T Consensus 53 ~~g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~la~~~~-~~~~v~~~~sgseA~~~al~~ 131 (434)
T 2epj_A 53 VDGARIVDLVLAYGPLILGHKHPRVLEAVEEALARGWLYGAPGEAEVLLAEKILGYVK-RGGMIRFVNSGTEATMTAIRL 131 (434)
T ss_dssp TTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCSCCSSCCHHHHHHHHHHHHHHC-TTCEEEEESSHHHHHHHHHHH
T ss_pred CCCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHhCC-CCCEEEEeCCHHHHHHHHHHH
Confidence 4567789998875 4555 57899988876 222 245666567789999999996 578999999999999999986
Q ss_pred ---hcCCCCeEEEcCCCchhhHHHHH--------------HCCC------eEEEecCCCCCCCCHHHHHHHhhc--CCce
Q 014492 166 ---VLDPGDKIVDCPPTFTMYEFDAA--------------VNGA------AVVKVPRKSDFSLNVELIADAVER--EKPK 220 (423)
Q Consensus 166 ---l~~~gd~Vl~~~p~y~~~~~~~~--------------~~g~------~~~~v~~~~~~~~d~~~l~~~i~~--~~~~ 220 (423)
+. +++.|++..|+|+.+...+. ..|+ .++.+|. .|++++++.+++ .+++
T Consensus 132 ar~~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~ 205 (434)
T 2epj_A 132 ARGYT-GRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY-----NDVEALERVFAEYGDRIA 205 (434)
T ss_dssp HHHHH-CCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET-----TCHHHHHHHHHHHGGGEE
T ss_pred HHHhh-CCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC-----CCHHHHHHHHHhCCCCEE
Confidence 44 45788888899975433211 1232 3555553 389999999864 3667
Q ss_pred EEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch-hhhhccCCcEEEEccChhhhcccCccccc
Q 014492 221 CIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR-MEWVKKHDNLIVLRTFSKRAGLAGLRVGY 294 (423)
Q Consensus 221 ~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~-~~~~~~~~~~i~i~S~SK~~g~~G~R~G~ 294 (423)
+|+++..+|+||.+.+ .+++.++|+. |++||+||+|.+|..+... ....+...+ +.||||.++. |+|+||
T Consensus 206 ~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~~~g~~~~~~~~~~~~d---i~s~sK~l~~-G~~~G~ 281 (434)
T 2epj_A 206 GVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGFRLGLEGAQGYFNIEGD---IIVLGKIIGG-GFPVGA 281 (434)
T ss_dssp EEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTTTSSTTHHHHHHTCCCS---EEEEEGGGGT-TSSCEE
T ss_pred EEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhceeCCcchhhHHhCCCCC---eeeecchhcC-Ccceee
Confidence 7776665678999886 6666777776 9999999999977332211 122222233 3488999985 999999
Q ss_pred cccCHHHHHHHHHh-----cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccC----CCCeecCCCceE
Q 014492 295 GAFPLSIIEYLWRA-----KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDV----PFLNPYPSYSNF 365 (423)
Q Consensus 295 i~~~~~~~~~l~~~-----~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~p~~~~~ 365 (423)
+++++++++.+... ...|+.+++++.++.++|+..+. ++..++++++++++.+.|+++ +.....++.|+|
T Consensus 282 v~~~~~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~ 360 (434)
T 2epj_A 282 VAGSREVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKALEE-EPVYSVSREAAKALEEAASEVLDRTGLPYTINRVESM 360 (434)
T ss_dssp EEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHH-SCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred eeecHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeE
Confidence 99999988877652 23467889999888888864221 345667777777887777654 543334567889
Q ss_pred EEEEeCCC-------------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHh
Q 014492 366 ILCEVTSG-------------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLM 420 (423)
Q Consensus 366 ~~~~~~~~-------------~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~ 420 (423)
+|+++++. .+..++.+.|.++||.+.++.. ..+|+++. +.++++++.++|+
T Consensus 361 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~----~~~~~~~~~t~e~i~~~l~~l~ 425 (434)
T 2epj_A 361 MQLFIGVEEVSNAAQARKADKKFYVKLHEEMLRRGVFIAPSNL----EAVFTGLPHQGEALEIAVEGLR 425 (434)
T ss_dssp EEEEETCSCCSSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTT----SCEECCTTCSHHHHHHHHHHHH
T ss_pred EEEEEeCCCcccchhccccCHHHHHHHHHHHHHCCeEEeccCC----CcEEEeccCCHHHHHHHHHHHH
Confidence 99999741 1356788999999999998752 35677654 3444455544444
No 178
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.96 E-value=2.9e-27 Score=231.77 Aligned_cols=278 Identities=16% Similarity=0.129 Sum_probs=212.8
Q ss_pred CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHH----HHCCCeEEEecCC
Q 014492 125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPRK 200 (423)
Q Consensus 125 ~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~~ 200 (423)
+|+++...++++.+++++|.+ ++++++|+++++..++..++++||+|+++.|+|+.+...+ +..|.+++.++.+
T Consensus 62 r~~~~~~~~l~~~la~~~g~~--~~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~ 139 (392)
T 3qhx_A 62 RTGNPTRTALEAALAAVEDAA--FGRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPVALA 139 (392)
T ss_dssp TTCCHHHHHHHHHHHHHTTCS--EEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEECTT
T ss_pred CCCChHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEeCCC
Confidence 456667889999999999964 6888889999999999999999999999999998766555 5679999999853
Q ss_pred CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEc
Q 014492 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR 279 (423)
Q Consensus 201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~ 279 (423)
|+++++++++ +++++|++++|+||||.+.+.+++.++|+. |+++|+|++|..+... ... ..+.++++.
T Consensus 140 -----d~~~l~~~i~-~~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~~~~~~-~~~----~~~~di~~~ 208 (392)
T 3qhx_A 140 -----DLDAVRAAIR-PTTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFASPALQ-QPL----SLGADVVLH 208 (392)
T ss_dssp -----CHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTC-CGG----GGTCSEEEE
T ss_pred -----CHHHHHHhhC-CCCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCcccccC-ChH----HhCCcEEEE
Confidence 8999999997 689999999999999999999999999998 9999999999855332 111 224458999
Q ss_pred cChhhhcccC-ccccccccC-HHHHHHHHHhcC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCC
Q 014492 280 TFSKRAGLAG-LRVGYGAFP-LSIIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPF 355 (423)
Q Consensus 280 S~SK~~g~~G-~R~G~i~~~-~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 355 (423)
|+||.+|.+| +|.||++.+ +++.+.+..... .+..++..+.++...++. +....++..++.+++.+.|++.+.
T Consensus 209 S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~---l~~~~~~~~~~~~~l~~~L~~~~~ 285 (392)
T 3qhx_A 209 STTKYIGGHSDVVGGALVTNDEELDQSFAFLQNGAGAVPGPFDAYLTMRGLKT---LVLRMQRHSENAAAVAEFLAEHPA 285 (392)
T ss_dssp ETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred cCccccCCCCCceEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH---HHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999777 799999997 678877766543 356778888777777755 445566677788888888887764
Q ss_pred Ce-e-cC----------------CCceEEEEEeCCC-CCHHHHHHHHHhCCcEEEeCCC------C--------------
Q 014492 356 LN-P-YP----------------SYSNFILCEVTSG-MDAKKLKDDLAKMGVMIRHYNN------K-------------- 396 (423)
Q Consensus 356 ~~-~-~p----------------~~~~~~~~~~~~~-~~~~~l~~~L~~~gI~v~~~~~------~-------------- 396 (423)
+. + +| +.|.++++.++++ ...+.+.+.|...|+.+..|+. +
T Consensus 286 v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~g 365 (392)
T 3qhx_A 286 ISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGRTAAEQLCAKTNIFILAESLGSVESLIEHPSAMTHASTAGSQLE 365 (392)
T ss_dssp EEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCHHHHHHHHHHCSSSEECSCCCCSSCEEECGGGTSCGGGBTTBCC
T ss_pred cceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcHHHHHHHHHhCCCceECCCCCCCCceeeCcccccccccCHHHcC
Confidence 42 2 22 1267889999742 3456677777666666654432 0
Q ss_pred CCCCeEEEEecChhhHHHHHHHH
Q 014492 397 ELKGYVRVSVGKPEHTDALMECL 419 (423)
Q Consensus 397 ~~~~~iRis~~~~~~~~~l~~al 419 (423)
..++.||||++.++. +++.+.+
T Consensus 366 ~~~~~iRlSvg~e~~-~~~i~~l 387 (392)
T 3qhx_A 366 VPDDLVRLSVGIEDV-ADLLDDL 387 (392)
T ss_dssp CCTTEEEEECCSSCH-HHHHHHH
T ss_pred CCCCeEEEEeccCCH-HHHHHHH
Confidence 236789999997653 4444433
No 179
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.96 E-value=5.2e-28 Score=239.86 Aligned_cols=279 Identities=18% Similarity=0.216 Sum_probs=207.2
Q ss_pred CCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHH----HHHCCCeEEEecCCC
Q 014492 126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRKS 201 (423)
Q Consensus 126 Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~~ 201 (423)
|+++...++|+++++++|.+ +.|++++|+ +++..++.+++++||+|+++.|.|..+... ++..|++++.++.+
T Consensus 111 ~~~~~~~~l~~~lA~l~g~~-~~v~~~sG~-~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~- 187 (445)
T 1qgn_A 111 YGNPTTVVLEEKISALEGAE-STLLMASGM-CASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPA- 187 (445)
T ss_dssp GCCHHHHHHHHHHHHHHTCS-EEEEESCHH-HHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECSS-
T ss_pred CCChHHHHHHHHHHHHhCCC-cEEEeCCHH-HHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCC-
Confidence 35556779999999999975 667777666 999999999999999999999999876553 45679999999853
Q ss_pred CCCCCHHHHHHHhhcCCc-eEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEc
Q 014492 202 DFSLNVELIADAVEREKP-KCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR 279 (423)
Q Consensus 202 ~~~~d~~~l~~~i~~~~~-~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~ 279 (423)
|+++++++++ +++ ++|++++|+||||.+.+.+++.++|+. |+++|+|++|..+... ... ..+.++++.
T Consensus 188 ----d~~~l~~ai~-~~tv~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~~~~~-~~~----~~g~Div~~ 257 (445)
T 1qgn_A 188 ----DVGALELALN-QKKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLNQ-KAL----ALGADLVLH 257 (445)
T ss_dssp ----CHHHHHHHHH-HSCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTC-CTT----TTTCSEEEE
T ss_pred ----CHHHHHHHhc-cCCCCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccC-Ccc----ccCCEEEEE
Confidence 8999999997 467 999999999999999999999999987 9999999999855422 111 234558999
Q ss_pred cChhhhcccC-ccccccccCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCC
Q 014492 280 TFSKRAGLAG-LRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFL 356 (423)
Q Consensus 280 S~SK~~g~~G-~R~G~i~~~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 356 (423)
|+||.+|..| .++||+++++++++.+...... ...++.....+...++ .+....++..++++++.+.|++.+.+
T Consensus 258 S~sK~~gg~gd~~~G~l~~~~~l~~~l~~~~~~~g~~~~~~~a~~~~~~l~---~l~~r~~~~~~~a~~l~~~L~~~p~v 334 (445)
T 1qgn_A 258 SATKFLGGHNDVLAGCISGPLKLVSEIRNLHHILGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAEILEAHPKV 334 (445)
T ss_dssp CTTTTTTCSSSCCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHGG---GHHHHHHHHHHHHHHHHHHHHTCTTE
T ss_pred CCcccccccccceEEEEEECHHHHHHHHHHHHHhCCCCCHHHHHHHHHhHH---HHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 9999988555 4799999999998888765433 2346665555555553 34555566677788999999888755
Q ss_pred -ee-cC----------------CCceEEEEEeCCC-CCHHHHHHHHHhCCcEEEeCCCC---------------------
Q 014492 357 -NP-YP----------------SYSNFILCEVTSG-MDAKKLKDDLAKMGVMIRHYNNK--------------------- 396 (423)
Q Consensus 357 -~~-~p----------------~~~~~~~~~~~~~-~~~~~l~~~L~~~gI~v~~~~~~--------------------- 396 (423)
.+ +| +.++++++.++++ .+...+.+.|...++.++.|+..
T Consensus 335 ~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~~~~~~~~l~~l~~~~i~~s~G~~~sl~~~p~~~~h~~~~~~~~~~ 414 (445)
T 1qgn_A 335 RHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGDLLTTAKFVDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSDRAK 414 (445)
T ss_dssp EEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSCHHHHHHHHHHCSSSEECSCCCSSSCEEECHHHHHSTTSCHHHHHT
T ss_pred eEEECCCCCCCchHHHHHHhccCCCcEEEEEECCCHHHHHHHHHhCCCceEeccCCCCceeeecccccccccCCHHHHHh
Confidence 22 33 2577889999742 12344555554345555544321
Q ss_pred --CCCCeEEEEecChhhHHHHHHHHhh
Q 014492 397 --ELKGYVRVSVGKPEHTDALMECLMH 421 (423)
Q Consensus 397 --~~~~~iRis~~~~~~~~~l~~al~~ 421 (423)
..++.||||++.+ +.++|.+.|++
T Consensus 415 ~g~~~~~iRlSvG~E-did~li~~L~~ 440 (445)
T 1qgn_A 415 YGIMDNLVRFSFGVE-DFDDLKADILQ 440 (445)
T ss_dssp TTCCSSEEEEECCSS-CHHHHHHHHHH
T ss_pred cCCCCCeEEEEeccC-CHHHHHHHHHH
Confidence 1247999999965 57888888765
No 180
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.96 E-value=8.9e-27 Score=230.26 Aligned_cols=304 Identities=15% Similarity=0.131 Sum_probs=221.7
Q ss_pred CCCCCC-CHHHHHHHhcC-C-CC-CCCCC-cc----hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCeE
Q 014492 104 ENPYGP-PPEVREALGQL-K-FP-YIYPD-PE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKI 173 (423)
Q Consensus 104 ~~~~~~-~~~v~~al~~~-~-~~-~~Y~~-~g----~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l-~~~gd~V 173 (423)
.+.+++ ++++.+++.+. . .. ..|+. .| ..++++.+++++|++ ++++++|+++++..++.++ +++||+|
T Consensus 8 ~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~--~~i~~~~gt~al~~~~~~~~~~~gd~V 85 (418)
T 2c81_A 8 WPEWPQHSDRTRRKIEEVFQSNRWAISGYWTGEESMERKFAKAFADFNGVP--YCVPTTSGSTALMLALEALGIGEGDEV 85 (418)
T ss_dssp CCCSSCCCHHHHHHHHHHHHHTCCSTTSBCCSSCCHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHTTCCTTCEE
T ss_pred CCCCCCCCHHHHHHHHHHHhcCCccccCcccCCHHHHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHcCCCCcCEE
Confidence 344443 68888887652 1 11 22532 23 678999999999976 4566667789999999998 8999999
Q ss_pred EEcCCCchhhHHHHHHCCCeEEEecCCC-CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEE
Q 014492 174 VDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVV 251 (423)
Q Consensus 174 l~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li 251 (423)
+++.|+|..+...++..|++++.++.+. ++.+|++++++.++ .++++|+++ ||||...+.+++.++|+. |++||
T Consensus 86 l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~-~~~~~v~~~---~~~G~~~~~~~i~~~~~~~~~~li 161 (418)
T 2c81_A 86 IVPSLTWIATATAVLNVNALPVFVDVEADTYCIDPQLIKSAIT-DKTKAIIPV---HLFGSMANMDEINEIAQEHNLFVI 161 (418)
T ss_dssp EEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCHHHHGGGCC-TTEEEECCB---CCTTCCCCHHHHHHHHHHTTCEEE
T ss_pred EECCCccHhHHHHHHHcCCEEEEEecCCCCCCcCHHHHHHhhC-CCCeEEEEe---CCcCCcccHHHHHHHHHHCCCEEE
Confidence 9999999999999999999999999764 78899999999997 588988864 589999999999999987 99999
Q ss_pred EccCCcccc-CCCchhhhhccCCcEEEEccC--hhhhcccCccccccccC-HHHHHHHHHhcCC--------------CC
Q 014492 252 LDEAYTEFS-GLESRMEWVKKHDNLIVLRTF--SKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP--------------YN 313 (423)
Q Consensus 252 ~Deay~~~~-~~~~~~~~~~~~~~~i~i~S~--SK~~g~~G~R~G~i~~~-~~~~~~l~~~~~~--------------~~ 313 (423)
+||+|..+. +.+...... . .+.+.|| ||.++. | |+||++++ +++++++...... +.
T Consensus 162 ~D~a~~~~~~~~~~~~~~~---~-~~~~~s~s~~K~~~~-g-~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (418)
T 2c81_A 162 EDCAQSHGSVWNNQRAGTI---G-DIGAFSCQQGKVLTA-G-EGGIIVTKNPRLFELIQQLRADSRVYCDDSSELMHGDM 235 (418)
T ss_dssp EECTTCTTCEETTEETTSS---S-SEEEEECCTTSSSCS-S-SCEEEEESCHHHHHHHHHHHBTTEEECSCGGGCCTTCB
T ss_pred EECcccccCccCCEecccc---c-ceEEEeccCCcccCC-C-CeEEEEECCHHHHHHHHHHHHhCccccccccccccchh
Confidence 999999875 333222211 1 2667777 999986 8 99999994 7888877654322 11
Q ss_pred --------------CcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeec-CCCc--e---EEE-EEeCC
Q 014492 314 --------------VSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPY-PSYS--N---FIL-CEVTS 372 (423)
Q Consensus 314 --------------~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~~~--~---~~~-~~~~~ 372 (423)
++.+........+ +++++..++.+++++++.+.|++++++.+. +..+ . +++ +.+++
T Consensus 236 ~~~~~~~~~g~~~~~~~~~aa~~~~~l---~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 312 (418)
T 2c81_A 236 QLVKKGDIQGSNYCLSEFQSAILLDQL---QELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQVSRQTYYGYVFRFDP 312 (418)
T ss_dssp SEEECCSSCCCBCCCCHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTTEEECCCSEEEEEECG
T ss_pred hccccccccCcCCCcCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCCCcccccEEEEEEEcc
Confidence 1112111111222 346677777888899999999988666653 3332 2 233 77774
Q ss_pred ----CCCHHHHHHHHHhC-CcE---EEeCCCC-----------------------------CC-------CCeEEEEe--
Q 014492 373 ----GMDAKKLKDDLAKM-GVM---IRHYNNK-----------------------------EL-------KGYVRVSV-- 406 (423)
Q Consensus 373 ----~~~~~~l~~~L~~~-gI~---v~~~~~~-----------------------------~~-------~~~iRis~-- 406 (423)
+.+.+++.+.|.++ ||. ++++..+ .. .+.|||++
T Consensus 313 ~~~~~~~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~ 392 (418)
T 2c81_A 313 VKFGGLNADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERASGQSIVIHHAI 392 (418)
T ss_dssp GGTTTCCHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHHHHHEEEEEGGG
T ss_pred ccccccCHHHHHHHHHHcCCCCcccccccccccccCchhcccccccccccccccccccccCCChHHHHHHhCEEEecCCc
Confidence 67889999999987 999 8876421 00 15899998
Q ss_pred --cChhhHHHHHHHHhhh
Q 014492 407 --GKPEHTDALMECLMHL 422 (423)
Q Consensus 407 --~~~~~~~~l~~al~~l 422 (423)
++.++++++.++|+++
T Consensus 393 ~~gt~edi~~~~~~l~~~ 410 (418)
T 2c81_A 393 LLAEPSHLSLLVDAVAEL 410 (418)
T ss_dssp GGSCHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHH
Confidence 4777888888887653
No 181
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.96 E-value=5.8e-28 Score=236.56 Aligned_cols=310 Identities=14% Similarity=0.114 Sum_probs=222.3
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhcCCCCCCC--CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh-cCCCC
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQLKFPYIY--PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGD 171 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y--~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l-~~~gd 171 (423)
.+++.+..+.+.++ +++.+++.+......| ++++..++|++++++++.+ ++++++|+++++..++..+ +++||
T Consensus 22 ~~~~~l~~~~p~~~--~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~--~~i~~~~gt~al~~~l~~~~~~~gd 97 (391)
T 3dr4_A 22 SDLPRISVAAPRLD--GNERDYVLECMDTTWISSVGRFIVEFEKAFADYCGVK--HAIACNNGTTALHLALVAMGIGPGD 97 (391)
T ss_dssp ------CCCCCCCC--SSHHHHHHHHHHHTCCSSCSHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHHTCCTTC
T ss_pred CCCceeccCCCCCC--HHHHHHHHHHHHcCCccCCChHHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHcCCCCcC
Confidence 45677887777664 5666776653211234 3567899999999999975 7888888899999999999 89999
Q ss_pred eEEEcCCCchhhHHHHHHCCCeEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCE
Q 014492 172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PIL 249 (423)
Q Consensus 172 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~ 249 (423)
+|+++.|+|..+...++..|++++.++.+ +++.+|++++++.++ +++++|+ |+||||.+.+.+++.++|+. |++
T Consensus 98 ~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~---~~n~tG~~~~~~~i~~l~~~~~~~ 173 (391)
T 3dr4_A 98 EVIVPSLTYIASANSVTYCGATPVLVDNDPRTFNLDAAKLEALIT-PRTKAIM---PVHLYGQICDMDPILEVARRHNLL 173 (391)
T ss_dssp EEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCGGGSGGGCC-TTEEEEC---CBCGGGCCCCHHHHHHHHHHTTCE
T ss_pred EEEECCCchHHHHHHHHHCCCEEEEEecCccccCcCHHHHHHhcC-CCceEEE---EECCCCChhhHHHHHHHHHHcCCE
Confidence 99999999999999999999999999976 568899999999997 6888887 67899999999999999987 999
Q ss_pred EEEccCCcccc-CCCchhhhhccCCcEEEEccCh--hhhcccCccccccccC-HHHHHHHHHhcCC--------------
Q 014492 250 VVLDEAYTEFS-GLESRMEWVKKHDNLIVLRTFS--KRAGLAGLRVGYGAFP-LSIIEYLWRAKQP-------------- 311 (423)
Q Consensus 250 li~Deay~~~~-~~~~~~~~~~~~~~~i~i~S~S--K~~g~~G~R~G~i~~~-~~~~~~l~~~~~~-------------- 311 (423)
+|+|++|..+. +.+...... .+ +.+.||| |.+ +|.+.|+++.+ +++.+.+......
T Consensus 174 li~D~a~~~g~~~~~~~~~~~--~d--i~~~S~s~~K~l--~~g~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g 247 (391)
T 3dr4_A 174 VIEDAAEAVGATYRGKKSGSL--GD--CATFSFFGNAII--TTGEGGMITTNDDDLAAKMRLLRGQGMDPNRRYWFPIVG 247 (391)
T ss_dssp EEEECTTCTTCEETTEETTSS--SS--EEEEECBTTSSS--CCBSCEEEEESCHHHHHHHHHHHBTTCCTTSTTCCSSCC
T ss_pred EEEECcccccceECCeeeccc--CC--EEEEECCCCCcC--CcCCeEEEEECCHHHHHHHHHHHhcCCCCCCcccccccc
Confidence 99999998643 222211111 12 6777766 655 55678888775 5576666554311
Q ss_pred --CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCC-------Cc-eEEEEEeCC--CCCHHHH
Q 014492 312 --YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPS-------YS-NFILCEVTS--GMDAKKL 379 (423)
Q Consensus 312 --~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~-------~~-~~~~~~~~~--~~~~~~l 379 (423)
+.++.+...+....+ +.+++..++.+++++++.+.|++++ +.+.+. .. ..+++.+++ +.+.+++
T Consensus 248 ~~~~~~~l~aa~~~~~~---~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l 323 (391)
T 3dr4_A 248 FNYRMTNIQAAIGLAQL---ERVDEHLAARERVVGWYEQKLARLG-NRVTKPHVALTGRHVFWMYTVRLGEGLSTTRDQV 323 (391)
T ss_dssp CBCBCCHHHHHHHHHHH---HTHHHHHHHHHHHHHHHHHHHGGGT-TSEECCCCCTTSCCCCSSEEEEECSSCSSCHHHH
T ss_pred cccCCCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhhcCC-ccccCcCCCCCCcceeEEEEEEECCccchhHHHH
Confidence 233444443333333 3456677788888899999998873 443222 12 235777775 6789999
Q ss_pred HHHHHhCCcEEEeCCCC-----C---------------CCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492 380 KDDLAKMGVMIRHYNNK-----E---------------LKGYVRVSVG---KPEHTDALMECLMHL 422 (423)
Q Consensus 380 ~~~L~~~gI~v~~~~~~-----~---------------~~~~iRis~~---~~~~~~~l~~al~~l 422 (423)
.+.|.++||.++++..+ . ....+||++. +.++++++.++|+++
T Consensus 324 ~~~L~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~ 389 (391)
T 3dr4_A 324 IKDLDALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPTHAGLTEADIDRVIAALDQV 389 (391)
T ss_dssp HHHHHHTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTT
T ss_pred HHHHHHCCCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 99999999999977521 0 1357999876 566677777777653
No 182
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.96 E-value=9.8e-28 Score=241.36 Aligned_cols=317 Identities=14% Similarity=0.090 Sum_probs=224.5
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhcC-CCCC--CCCC-------cchH----HHHHHHHHHhCCCCCc----EEEeCCHH
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQL-KFPY--IYPD-------PESR----RLRAALAKDSGLESDH----ILVGCGAD 156 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~--~Y~~-------~g~~----~lr~~ia~~~g~~~~~----i~~t~G~~ 156 (423)
.+.|.|..++++ +++.+++++.+. ...+ +||. .... .+++.+++++|+++++ |++++|+
T Consensus 44 ~~~i~L~a~e~~--~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~a~~~g~~~~~~~~~V~~~sGs- 120 (483)
T 1rv3_A 44 RVGLELIASENF--ASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGS- 120 (483)
T ss_dssp HSSEECCTTCCC--CCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHH-
T ss_pred hcCeEEEcCCCC--CCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHHHHHhCCCcccCceEEEECCcH-
Confidence 356999888874 578999999873 2212 3432 1223 4458888899987653 8899988
Q ss_pred HHHHHHHHHhcCCCCeEEEcCCCchhhHHH--------HHHCC--CeEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEc
Q 014492 157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFD--------AAVNG--AAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLT 225 (423)
Q Consensus 157 ~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~--------~~~~g--~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~ 225 (423)
+++..++.++++|||+|++++|+|..+... ++..| .+++.++.+ +++.+|+++|++.+.+.++|+|++
T Consensus 121 ~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~~~~~iD~d~le~~i~~~~tklIi~- 199 (483)
T 1rv3_A 121 PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARLFHPKLIIA- 199 (483)
T ss_dssp HHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHHCCSEEEE-
T ss_pred HHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECccccCCCcCCHHHHHHHHhhcCCcEEEE-
Confidence 788888888999999999999998755421 22234 566666545 567899999999997568999999
Q ss_pred CCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccc-cCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHH---
Q 014492 226 SPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEF-SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS--- 300 (423)
Q Consensus 226 ~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~-~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~--- 300 (423)
+++||+ .+++.+++.+||+. |++||+|++|... ...+.....+. ...+++.|+||.+ .|+|.||++++++
T Consensus 200 ~~sn~~-~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~--~~div~~s~~K~l--~GprgG~i~~~~~~~~ 274 (483)
T 1rv3_A 200 GTSCYS-RNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFE--HCHVVTTTTHKTL--RGCRAGMIFYRRGVRS 274 (483)
T ss_dssp CCSSCC-SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGG--TCSEEEEESSGGG--CCCSCEEEEEECSBCC
T ss_pred eCCcCC-CcCCHHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCC--CCcEEEecCcccC--CCCCceEEEEcchhhh
Confidence 999998 99999999999987 9999999998732 21111111111 2348889999976 6889999999764
Q ss_pred ------------HHHHHHHhcCC---CCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCC--
Q 014492 301 ------------IIEYLWRAKQP---YNVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPYPS-- 361 (423)
Q Consensus 301 ------------~~~~l~~~~~~---~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~-- 361 (423)
+.+.+.....+ .+++.....+...+++. ..++++.+++++++++++.+.|++++ +.+.++
T Consensus 275 ~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~ 353 (483)
T 1rv3_A 275 VDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVELG-YKIVTGGS 353 (483)
T ss_dssp -------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTT-CEEGGGSC
T ss_pred hccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhcC-CEeccCCC
Confidence 44444433222 33445545444445543 24678889999999999999999885 554333
Q ss_pred CceEEEEEeCC-CCCHHHHHHHHHhCCcEEE----eCCC-CCCCCeEEEEecC-------hhhHHHHHHHHhh
Q 014492 362 YSNFILCEVTS-GMDAKKLKDDLAKMGVMIR----HYNN-KELKGYVRVSVGK-------PEHTDALMECLMH 421 (423)
Q Consensus 362 ~~~~~~~~~~~-~~~~~~l~~~L~~~gI~v~----~~~~-~~~~~~iRis~~~-------~~~~~~l~~al~~ 421 (423)
...++|++++. +.+..++.+.|.++||.++ ++.. ...++++||+++. .++++++.++|++
T Consensus 354 ~~~~~~v~~~~~g~~~~~~~~~L~~~gI~v~~~~~pg~~~~~~~~~iRis~~~~~t~g~~~edi~~~~~~l~~ 426 (483)
T 1rv3_A 354 DNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHR 426 (483)
T ss_dssp SSSEEEEEGGGGTCCHHHHHHHHHHTTEECEEECCSSCSCTTSCCEEEEECHHHHHTTCCHHHHHHHHHHHHH
T ss_pred CCceEEEeccCCCCCHHHHHHHHHhCCcEEecCCCCCCCcCCCCceEEeecCCcccCCCCHHHHHHHHHHHHH
Confidence 23578888853 5688889888889999998 6653 2246799999874 4566666666654
No 183
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.96 E-value=6.8e-28 Score=239.12 Aligned_cols=320 Identities=15% Similarity=0.098 Sum_probs=212.2
Q ss_pred CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCCC--CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHH
Q 014492 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (423)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~--~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~ 164 (423)
+..+++++|+..+. +.++ .+|++.+++.+ +... .+|+++...+++++++++++ .+++|++++|++++++.+++
T Consensus 49 d~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~~v~~~~sGsea~~~al~ 127 (429)
T 4e77_A 49 DVDGKAYIDYVGSWGPMILGHNHPAIRQAVIEAVERGLSFGAPTEMEVKMAQLVTDLVP-TMDMVRMVNSGTEATMSAIR 127 (429)
T ss_dssp ETTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSCCSSCCHHHHHHHHHHHHHST-TCSEEEEESSHHHHHHHHHH
T ss_pred ECCCCEEEECCCchhccccCCCCHHHHHHHHHHHHhCcccCCCCHHHHHHHHHHHhhCC-CCCEEEEeCcHHHHHHHHHH
Confidence 34577899998775 4565 57999999876 3322 44677777899999999997 68899999999999999998
Q ss_pred Hhc--CCCCeEEEcCCCchhhHHHHHH-CC--CeEEEecCCCCC------------CCCHHHHHHHhhc--CCceEEEEc
Q 014492 165 CVL--DPGDKIVDCPPTFTMYEFDAAV-NG--AAVVKVPRKSDF------------SLNVELIADAVER--EKPKCIFLT 225 (423)
Q Consensus 165 ~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g--~~~~~v~~~~~~------------~~d~~~l~~~i~~--~~~~~i~l~ 225 (423)
... ..++.|++..++|+.+...+.. .| ......|...+. ..|++++++.+++ .++++|+ +
T Consensus 128 ~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi-~ 206 (429)
T 4e77_A 128 LARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTYNDLASVRQAFEQYPQEVACII-V 206 (429)
T ss_dssp HHHHHHCCCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEECTTCHHHHHHHHHHSTTTEEEEE-E
T ss_pred HHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCCCCHHHHHHHHHhcCCCEEEEE-E
Confidence 543 3467899999999765542211 11 111111111110 1289999999874 3455555 5
Q ss_pred CCC-CCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCc--hhhhhccCCcEEEEccChhhhcccCcccccccc
Q 014492 226 SPN-NPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF 297 (423)
Q Consensus 226 ~p~-NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~ 297 (423)
+|+ +++|.+.+ .+++.++|+. |++||+||+|.+| ..+. .....+..++ +.|+||.++ +|+|+||+++
T Consensus 207 ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~~~~~~~~~~~pd---i~t~sK~~~-~G~~~G~~~~ 281 (429)
T 4e77_A 207 EPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVALAGAQDYYHVIPD---LTCLGKIIG-GGMPVGAFGG 281 (429)
T ss_dssp CSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBTTCHHHHTTCCCS---EEEEEGGGG-TTSCCEEEEE
T ss_pred CCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCcchHHHhcCCCCC---eeeeccccc-CCCCeEEEEE
Confidence 555 44566666 6888888887 9999999999988 3222 1222222233 348899999 8999999999
Q ss_pred CHHHHHHHHHh-----cCCCCCcHHHHHHHHHHhC---ChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEE
Q 014492 298 PLSIIEYLWRA-----KQPYNVSVAAEVAACAALQ---NPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCE 369 (423)
Q Consensus 298 ~~~~~~~l~~~-----~~~~~~~~~~~~a~~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~ 369 (423)
++++++.+... ..+|+.+++++.++.++|+ ++++.++.++.....++.|.+.+.+.+.....++.|+|++++
T Consensus 282 ~~~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~ 361 (429)
T 4e77_A 282 RREVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQVGVYETLTELTDSLATGLRHAAKEENIPLVVNHVGGMFGLF 361 (429)
T ss_dssp CHHHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEE
T ss_pred CHHHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeEEEEE
Confidence 99998887652 3347889999998888886 344445555544555555555555556544456678999999
Q ss_pred eCCCC--------------CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHhh
Q 014492 370 VTSGM--------------DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLMH 421 (423)
Q Consensus 370 ~~~~~--------------~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~~ 421 (423)
+++.. ...++++.|.++||.+++++. ..+|+++. +.++++++.++|++
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~----~~~~~~~~~t~e~i~~~l~~l~~ 424 (429)
T 4e77_A 362 FTNADTVTCYQDVMNCDVERFKRFFHLMLEEGVYLAPSAF----EAGFMSLAHSNEDIQKTVNAARR 424 (429)
T ss_dssp CCSSSCCCSHHHHHTSCHHHHHHHHHHHHHTTEECCSSTT----SCEECCTTCCHHHHHHHHHHHHH
T ss_pred EccCcccccccccccccHHHHHHHHHHHHHCCeEEeecCC----CCEEEeccCCHHHHHHHHHHHHH
Confidence 87431 127888999999999998762 45677654 44455555555543
No 184
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.96 E-value=3e-26 Score=226.10 Aligned_cols=295 Identities=20% Similarity=0.235 Sum_probs=216.1
Q ss_pred CCCCCCHHHHHHHhcCCCCCCCC---CcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCch
Q 014492 105 NPYGPPPEVREALGQLKFPYIYP---DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT 181 (423)
Q Consensus 105 ~~~~~~~~v~~al~~~~~~~~Y~---~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~ 181 (423)
..++.++.+.+++.. ...+.|+ ++..+++++.+++++|.+ ++++++|+++++..++.+++++||+|+++.|+|.
T Consensus 30 ~~~~~~~~~~~~~~~-~~~~~y~~~~~~~~~~l~~~la~~~g~~--~~~~~~~gt~a~~~al~~l~~~gd~vi~~~~~~~ 106 (412)
T 2cb1_A 30 YGFKTLEEGQERFAT-GEGYVYARQKDPTAKALEERLKALEGAL--EAVVLASGQAATFAALLALLRPGDEVVAAKGLFG 106 (412)
T ss_dssp CCCSSHHHHHHHHHH-CCSCSBTTTCCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHTTCCTTCEEEEETTCCH
T ss_pred eecCChHHHHHHhcc-ccCcCcCCCCChHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCch
Confidence 345556666666652 2234553 345789999999999964 8999999999999999999999999999999998
Q ss_pred hhHHH----HHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCC
Q 014492 182 MYEFD----AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAY 256 (423)
Q Consensus 182 ~~~~~----~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay 256 (423)
..... ++..|++++.++. |++++++.++ +++++|++++|+||||.+++.+++.++|+. |+++|+||+|
T Consensus 107 ~~~~~~~~~~~~~g~~~~~~~~------~~~~l~~~i~-~~~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~ 179 (412)
T 2cb1_A 107 QTIGLFGQVLSLMGVTVRYVDP------EPEAVREALS-AKTRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTF 179 (412)
T ss_dssp HHHHHHHHTTTTTTCEEEEECS------SHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGG
T ss_pred hHHHHHHHHHHHcCCEEEEECC------CHHHHHHHhc-cCCeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCC
Confidence 65544 3447999999985 3899999997 689999999999999999999999999998 9999999999
Q ss_pred ccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCH----------------------------HHHHHHHHh
Q 014492 257 TEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL----------------------------SIIEYLWRA 308 (423)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~----------------------------~~~~~l~~~ 308 (423)
..+....... ..+.++++.|+||.++.+|.|+|+++..+ ++.+.++..
T Consensus 180 ~~~~~~~~~~----~~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~r~~ 255 (412)
T 2cb1_A 180 GAAGALCRPL----AWGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPERVRTL 255 (412)
T ss_dssp GTTTTSCCGG----GGTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGHHHHHHHHH
T ss_pred ccccccCCcc----ccCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhhccchHHHHHHHHHH
Confidence 8762211111 23567999999999988999999887633 445555543
Q ss_pred c-CC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCe-e-cC----------------CCceEEE
Q 014492 309 K-QP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLN-P-YP----------------SYSNFIL 367 (423)
Q Consensus 309 ~-~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~p----------------~~~~~~~ 367 (423)
. .. +..++.....+...++. +....++..++.+++.+.|.+.+.+. + .| ..+.++.
T Consensus 256 ~~~~~g~~~~~~~a~~~~~~l~~---l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~~~~~~~~~~iv~ 332 (412)
T 2cb1_A 256 GLSLCGMALSPFNAYLLFQGLET---VALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNARKYLASGGPILT 332 (412)
T ss_dssp HTTTTCCCCCHHHHHHHHHHGGG---HHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHHHHHCSSSCSEEE
T ss_pred HHHhcCCCCChHHhHHHHcCCch---HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHHhCCCCceEEE
Confidence 3 22 23455555555555532 34555666788899999998876655 3 13 2466788
Q ss_pred EEeCCCCCHHHHHHHHHhCCcEEEeCC---------CC------C-----------CCCeEEEEecChh---hHHHHHHH
Q 014492 368 CEVTSGMDAKKLKDDLAKMGVMIRHYN---------NK------E-----------LKGYVRVSVGKPE---HTDALMEC 418 (423)
Q Consensus 368 ~~~~~~~~~~~l~~~L~~~gI~v~~~~---------~~------~-----------~~~~iRis~~~~~---~~~~l~~a 418 (423)
+.+ + +.+.+.+.|.+.||.+ .++ .+ . .++.||+|++..+ +.++|.++
T Consensus 333 ~~~--~-~~~~~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s~g~~~~~~~i~~l~~a 408 (412)
T 2cb1_A 333 LDL--G-DLERASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVGLEDPLDLLALFEEA 408 (412)
T ss_dssp EEC--S-SHHHHHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHH
T ss_pred EEe--C-CHHHHHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHH
Confidence 888 3 6778888888899998 653 11 0 1679999998544 44445555
Q ss_pred Hh
Q 014492 419 LM 420 (423)
Q Consensus 419 l~ 420 (423)
|+
T Consensus 409 l~ 410 (412)
T 2cb1_A 409 LE 410 (412)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 185
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.96 E-value=1.3e-27 Score=240.02 Aligned_cols=320 Identities=15% Similarity=0.130 Sum_probs=221.5
Q ss_pred CCCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-C---CCCC--CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492 91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-L---KFPY--IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (423)
Q Consensus 91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~---~~~~--~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~ 161 (423)
+..++.+||+..| .+.++ .+|+|.+|+.+ + .+.+ .|+++...+|.+.++++++...++|++++|+++++..
T Consensus 50 d~~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~ 129 (476)
T 3i5t_A 50 TEDGRRLIDGPAGMWCAQVGYGRREIVDAMAHQAMVLPYASPWYMATSPAARLAEKIATLTPGDLNRIFFTTGGSTAVDS 129 (476)
T ss_dssp ETTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCCCCCTTTCBCHHHHHHHHHHHTTSSTTCCEEEEESSHHHHHHH
T ss_pred ECCCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccCcccCccCCHHHHHHHHHHHhcCCCCcCEEEEeCchHHHHHH
Confidence 3456789999877 56676 47899988875 2 2211 3444456788888888887777899999999999999
Q ss_pred HHHHhcC--------CCCeEEEcCCCchhhHHHHHHCCCe-------------EEEecCCCC---CCCC--------HHH
Q 014492 162 IMRCVLD--------PGDKIVDCPPTFTMYEFDAAVNGAA-------------VVKVPRKSD---FSLN--------VEL 209 (423)
Q Consensus 162 ~~~~l~~--------~gd~Vl~~~p~y~~~~~~~~~~g~~-------------~~~v~~~~~---~~~d--------~~~ 209 (423)
+++.+.. .++.|++..|+|+.+...+...+.. +..++.+.. +..| +++
T Consensus 130 Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 209 (476)
T 3i5t_A 130 ALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQE 209 (476)
T ss_dssp HHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHH
Confidence 9997753 3578999999998777665543322 223332111 1222 788
Q ss_pred HHHHhhc---CCceEEEEcCCCCCcCc-CCC---HHHHHHHHcC-CCEEEEccCCccccCCCch--hh-hhccCCcEEEE
Q 014492 210 IADAVER---EKPKCIFLTSPNNPDGS-IIN---DEDLLKILEM-PILVVLDEAYTEFSGLESR--ME-WVKKHDNLIVL 278 (423)
Q Consensus 210 l~~~i~~---~~~~~i~l~~p~NPtG~-~~~---~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~-~~~~~~~~i~i 278 (423)
|++.+.+ .++++|+++.++|++|. +++ ++++.++|+. |++||+||+|.+|...+.. .. ..+..++++
T Consensus 210 le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v~pdi~-- 287 (476)
T 3i5t_A 210 FEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFGVVPDII-- 287 (476)
T ss_dssp HHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCCCCSEE--
T ss_pred HHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCceeeecccCCCcchh--
Confidence 8888863 46788888888999997 555 4555556665 9999999999988654432 22 222334433
Q ss_pred ccChhhhcccC-ccccccccCHHHHHHHHHh-------c--CCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH
Q 014492 279 RTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA-------K--QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFK 348 (423)
Q Consensus 279 ~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~~-------~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~ 348 (423)
++||.++ .| +|+|++++++++++.+... . ..|+.+++++.++.++|+..+- +...++++++.+++.+
T Consensus 288 -t~sK~l~-~G~~plg~v~~~~~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~-~~~~~~~~~~~~~l~~ 364 (476)
T 3i5t_A 288 -TFAKGVT-SGYVPLGGLAISEAVLARISGENAKGSWFTNGYTYSNQPVACAAALANIELMER-EGIVDQAREMADYFAA 364 (476)
T ss_dssp -EECGGGG-TTSSCCEEEEECHHHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHH
T ss_pred -hhhhhhc-CCCcCeEEEEECHHHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHH
Confidence 5789998 58 9999999999999988753 1 3578899999999999864211 3455566666666666
Q ss_pred HHccC---CCCeecCCCceEEEEEeCCCC-----------CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---Chhh
Q 014492 349 LLKDV---PFLNPYPSYSNFILCEVTSGM-----------DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEH 411 (423)
Q Consensus 349 ~L~~~---~~~~~~p~~~~~~~~~~~~~~-----------~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~ 411 (423)
.|+++ +.+...++.|.|+++++.+.. ....+.+.|.++||.+++.+ +++||++. +.++
T Consensus 365 ~L~~l~~~~~v~~v~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-----~~iRi~p~l~~t~e~ 439 (476)
T 3i5t_A 365 ALASLRDLPGVAETRSVGLVGCVQCLLDPTRADGTAEDKAFTLKIDERCFELGLIVRPLG-----DLCVISPPLIISRAQ 439 (476)
T ss_dssp HHHTTTTSTTEEEEEEETTEEEEEECCC-----CCHHHHHHHHHHHHHHHHTTEECEEET-----TEEEECCCTTCCHHH
T ss_pred HHHHHhcCCCeEEEEecCceeEEEEecCccccccccchhHHHHHHHHHHHHCCCEEEecC-----CEEEEECCCCCCHHH
Confidence 66543 444445677888888886321 15678888999999999853 79999954 4444
Q ss_pred HHHHHHHHh
Q 014492 412 TDALMECLM 420 (423)
Q Consensus 412 ~~~l~~al~ 420 (423)
++++.++|+
T Consensus 440 i~~~l~~l~ 448 (476)
T 3i5t_A 440 IDEMVAIMR 448 (476)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 444444443
No 186
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.96 E-value=8.3e-27 Score=229.07 Aligned_cols=280 Identities=16% Similarity=0.149 Sum_probs=207.2
Q ss_pred CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHH----HHCCCeEEEecCC
Q 014492 125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPRK 200 (423)
Q Consensus 125 ~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~~ 200 (423)
+|+++...++++.+++++|.+ +.++++ ++++++..++.+++++||+|+++.|+|+.+...+ +..|++++.++.
T Consensus 61 r~~~~~~~~l~~~la~~~g~~-~~i~~~-sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~- 137 (398)
T 1gc0_A 61 RISNPTLNLLEARMASLEGGE-AGLALA-SGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDM- 137 (398)
T ss_dssp --CCHHHHHHHHHHHHHHTCS-EEEEES-SHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECT-
T ss_pred CCCChHHHHHHHHHHHHhCCC-cEEEEC-CHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECC-
Confidence 346667889999999999975 455555 4579999999999999999999999998877665 567999999985
Q ss_pred CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEc
Q 014492 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR 279 (423)
Q Consensus 201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~ 279 (423)
.|++++++.++ +++++|++++|+||||.+++.+++.++|+. |+++|+||+|..+.... .. ..+.++++.
T Consensus 138 ----~d~~~l~~~i~-~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~-~~----~~~~d~~~~ 207 (398)
T 1gc0_A 138 ----ADLQALEAAMT-PATRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNTYCTPYLQR-PL----ELGADLVVH 207 (398)
T ss_dssp ----TCHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEECTTTHHHHCC-GG----GGTCSEEEE
T ss_pred ----CCHHHHHHhcC-CCCeEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCCcccccCC-ch----hhCceEEEE
Confidence 27999999997 689999999999999999999999999998 99999999998655322 11 234568999
Q ss_pred cChhhhcccCccc-cccccCHHHHH-HHHHhc---CCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC
Q 014492 280 TFSKRAGLAGLRV-GYGAFPLSIIE-YLWRAK---QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP 354 (423)
Q Consensus 280 S~SK~~g~~G~R~-G~i~~~~~~~~-~l~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 354 (423)
|+||.++.+|.|+ ||++++++.++ .+.... ..++.+++.+.++...++. +....++..++.+.+.+.|++++
T Consensus 208 S~sK~~~~~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~L~~~~ 284 (398)
T 1gc0_A 208 SATKYLSGHGDITAGIVVGSQALVDRIRLQGLKDMTGAVLSPHDAALLMRGIKT---LNLRMDRHCANAQVLAEFLARQP 284 (398)
T ss_dssp ETTTTTTCSSSCCCEEEEECHHHHHHHHHTHHHHHTCCCCCHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHTCT
T ss_pred CCccccCCCCCCeEEEEEEChHHHHHHHHHHhhccCCCCCCHHHHHHHHhccch---HHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999998 99999988765 444332 2356788888887777754 44556666777777778777654
Q ss_pred CCe--------------ec----CCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEe---CCC------------------
Q 014492 355 FLN--------------PY----PSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRH---YNN------------------ 395 (423)
Q Consensus 355 ~~~--------------~~----p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~---~~~------------------ 395 (423)
.+. +. ++.++++.+++++ +.+...+.+.+.|+.++. |+.
T Consensus 285 ~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~ 362 (398)
T 1gc0_A 285 QVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKG--GIGAGRRFMNALQLFSRAVSLGDAESLAQHPASMTHSSYTPE 362 (398)
T ss_dssp TEEEEEEC----------------CCTTEEEEEETT--HHHHHHHHHHHCSSSEECSCCSCSSCEEECGGGTTTSSSCHH
T ss_pred CeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECC--CHHHHHHHHHhCCCceeccCCCCcceeeecccccccccCCHH
Confidence 321 11 1357788888862 234556666788888865 211
Q ss_pred ----C-CCCCeEEEEecC---hhhHHHHHHHHhhh
Q 014492 396 ----K-ELKGYVRVSVGK---PEHTDALMECLMHL 422 (423)
Q Consensus 396 ----~-~~~~~iRis~~~---~~~~~~l~~al~~l 422 (423)
. ..+++||||++. .++.++|.++|+++
T Consensus 363 ~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~~ 397 (398)
T 1gc0_A 363 ERAHYGISEGLVRLSVGLEDIDDLLADVQQALKAS 397 (398)
T ss_dssp HHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHhc
Confidence 0 014899999986 34445555555543
No 187
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.95 E-value=4.8e-27 Score=230.44 Aligned_cols=298 Identities=14% Similarity=0.083 Sum_probs=215.8
Q ss_pred HHHHHHHhcCCCCCCCCCcc--hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCeEEEcCCCchhhHHHH
Q 014492 111 PEVREALGQLKFPYIYPDPE--SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDA 187 (423)
Q Consensus 111 ~~v~~al~~~~~~~~Y~~~g--~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~ 187 (423)
+++.+++.+......|+..| ..++|+++++++|. ++|++++|+++++..++.++ +++||+|+++.|+|..+...+
T Consensus 12 ~~v~~a~~~~~~~~~~~~~g~~~~~l~~~la~~~~~--~~v~~~~ggt~al~~~~~~l~~~~gd~Vl~~~~~~~~~~~~~ 89 (394)
T 1o69_A 12 GNELKYIEEVFKSNYIAPLGEFVNRFEQSVKDYSKS--ENALALNSATAALHLALRVAGVKQDDIVLASSFTFIASVAPI 89 (394)
T ss_dssp CCHHHHHHHHHHHTTTSCTTHHHHHHHHHHHHHHCC--SEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCGGGTHHH
T ss_pred HHHHHHHHHHHHcCCccCCChHHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHcCCCCCCEEEECCCccHHHHHHH
Confidence 45566665521112234345 78999999999996 68999999999999999999 899999999999999999999
Q ss_pred HHCCCeEEEecCCCCCCCCHHHHHHHhhcC--CceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCc-cccCCC
Q 014492 188 AVNGAAVVKVPRKSDFSLNVELIADAVERE--KPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYT-EFSGLE 263 (423)
Q Consensus 188 ~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~--~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~-~~~~~~ 263 (423)
+..|++++.++.++++.+|++++++.+++. ++++|++++ |||...+.+++.++|+. |+++|+||+|. ++.+.+
T Consensus 90 ~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~ 166 (394)
T 1o69_A 90 CYLKAKPVFIDCDETYNIDVDLLKLAIKECEKKPKALILTH---LYGNAAKMDEIVEICKENDIVLIEDAAEALGSFYKN 166 (394)
T ss_dssp HHTTCEEEEECBCTTSSBCHHHHHHHHHHCSSCCCEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETT
T ss_pred HHcCCEEEEEEeCCCCCcCHHHHHHHHhcccCCceEEEEEC---CCCChhhHHHHHHHHHHcCCEEEEECcCcccceeCC
Confidence 999999999998777889999999999743 789999885 89999999999999987 99999999998 343322
Q ss_pred chhhhhccCCcEEEEccChhhhcccCccccccccC-HHHHHHHHHhcCCCC----------------CcHHHHHHHHHHh
Q 014492 264 SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQPYN----------------VSVAAEVAACAAL 326 (423)
Q Consensus 264 ~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~-~~~~~~l~~~~~~~~----------------~~~~~~~a~~~~l 326 (423)
...... .+ +.+.|+||..+++|.|+||++++ +++++.+......+. .+.....++...+
T Consensus 167 ~~~~~~--~~--~~~~s~s~~K~l~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l 242 (394)
T 1o69_A 167 KALGTF--GE--FGVYSYNGNKIITTSGGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQM 242 (394)
T ss_dssp EETTSS--SS--EEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCCCBCBCCHHHHHHHHHHH
T ss_pred cccccc--cC--cEEEEEeCCccCCCCCceEEEECCHHHHHHHHHHHHhccccCccccccccCcccCcCHHHHHHHHHHH
Confidence 211111 12 44555643334567899999995 888888876543220 2333333333333
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCC----ce--EEEEEeCCC---------------------CCHHHH
Q 014492 327 QNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSY----SN--FILCEVTSG---------------------MDAKKL 379 (423)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~----~~--~~~~~~~~~---------------------~~~~~l 379 (423)
+++++..++++++++++.+.|+++ +.+.+.. ++ ++++.++++ .+.+++
T Consensus 243 ---~~l~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 317 (394)
T 1o69_A 243 ---EVLEQRVLKKREIYEWYKEFLGEY--FSFLDELENSRSNRWLSTALINFDKNELNACQKDINISQKNITLHPKISKL 317 (394)
T ss_dssp ---TTHHHHHHHHHHHHHHHHHHHTTT--EECCCCCTTEECCCSSEEEEESCCGGGSCCCCEEEECCCCCCCCCHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHHHHHhccc--ccccCCCCCCcceeEEEEEEecchhhccccccccccccccccccccCHHHH
Confidence 456778888999999999999887 3433321 34 367777632 367889
Q ss_pred HHHHHhCCcEEEeCCCC-----CCC---------------CeEEEEe---cChhhHHHHHHHHhhh
Q 014492 380 KDDLAKMGVMIRHYNNK-----ELK---------------GYVRVSV---GKPEHTDALMECLMHL 422 (423)
Q Consensus 380 ~~~L~~~gI~v~~~~~~-----~~~---------------~~iRis~---~~~~~~~~l~~al~~l 422 (423)
.+.|.++||.++++..+ ... ..+|+.. .+.++++++.++|+++
T Consensus 318 ~~~L~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~edi~~~~~~l~~~ 383 (394)
T 1o69_A 318 IEDLKNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLILKS 383 (394)
T ss_dssp HHHHHHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 99999999999987421 111 2334433 4677788888888754
No 188
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.95 E-value=2.4e-27 Score=230.48 Aligned_cols=306 Identities=15% Similarity=0.139 Sum_probs=223.8
Q ss_pred CeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCeE
Q 014492 96 DIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKI 173 (423)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l-~~~gd~V 173 (423)
++++++.+.+++.+ +.+++.+. .....|++++..++|++++++++.+ ++++++|+++++..++..+ +++||+|
T Consensus 7 ~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~--~~~~~~~gt~a~~~~~~~~~~~~gd~v 81 (374)
T 3uwc_A 7 PYSYLERQFADIEP---YLNDLREFIKTADFTLGAELEKFEKRFAALHNAP--HAIGVGTGTDALAMSFKMLNIGAGDEV 81 (374)
T ss_dssp CSCCHHHHTSSCHH---HHHHHHHHHHHTCCSSCHHHHHHHHHHHHHTTCS--EEEEESCHHHHHHHHHHHTTCCTTCEE
T ss_pred eeeccccCCCCchH---HHHHHHHHHHcCCcccChhHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHcCCCCCCEE
Confidence 45777777776643 77777663 2223346678899999999999965 7888999999999999999 9999999
Q ss_pred EEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEE
Q 014492 174 VDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVL 252 (423)
Q Consensus 174 l~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~ 252 (423)
+++.|+|..+...++..|++++.++.++++.+|++++++.+. +++++|+ |+||||.+.+.+++.++|+. |+++|+
T Consensus 82 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~---~~n~~G~~~~~~~i~~~~~~~~~~li~ 157 (374)
T 3uwc_A 82 ITCANTFIASVGAIVQAGATPVLVDSENGYVIDPEKIEAAIT-DKTKAIM---PVHYTGNIADMPALAKIAKKHNLHIVE 157 (374)
T ss_dssp EEESSSCHHHHHHHHHTTCEEEEECBCTTSSBCGGGTGGGCC-TTEEEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEE
T ss_pred EECCCccHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHhCC-CCceEEE---EeCCcCCcCCHHHHHHHHHHcCCEEEE
Confidence 999999999999999999999999987778899999999997 5788877 89999999999999999987 999999
Q ss_pred ccCCccccC-CCchhhhhccCCcEEEEccCh--hhhcccCccccccccC-HHHHHHHHHhcCC--------------CCC
Q 014492 253 DEAYTEFSG-LESRMEWVKKHDNLIVLRTFS--KRAGLAGLRVGYGAFP-LSIIEYLWRAKQP--------------YNV 314 (423)
Q Consensus 253 Deay~~~~~-~~~~~~~~~~~~~~i~i~S~S--K~~g~~G~R~G~i~~~-~~~~~~l~~~~~~--------------~~~ 314 (423)
||+|..+.. ........ ..+++.|+| |.++.+|. .|+++++ +++.+.+...... +..
T Consensus 158 D~~~~~g~~~~~~~~~~~----~d~~~~s~~~~K~l~~~g~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (374)
T 3uwc_A 158 DACQTILGRINDKFVGSW----GQFACFSLHPLKNLNVWSD-AGVIITHSDEYAEKLRLYRNHGLINRDVCVEYGINCRM 232 (374)
T ss_dssp ECTTCTTCEETTEETTSS----SSEEEEECSSSSSSCCSSC-CEEEEESCHHHHHHHHHHTBTTEEETTEESSCCCBCBC
T ss_pred eCCCccCceeCCeecccc----ccEEEEeCCCCCcCCccce-eEEEEeCCHHHHHHHHHHHhcCccccCccccccccCCC
Confidence 999986532 22211111 146777866 98875465 7888875 5677776654321 223
Q ss_pred cHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCC-Ceec--CCCc--eE--EEEEeCCCCCHHHHHHHHHhCC
Q 014492 315 SVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPF-LNPY--PSYS--NF--ILCEVTSGMDAKKLKDDLAKMG 387 (423)
Q Consensus 315 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~~--p~~~--~~--~~~~~~~~~~~~~l~~~L~~~g 387 (423)
+.+...+....+ +.+++..++.+++.+++.+.|++++. +.+. +..+ .+ +.+.. .+..++.+.|.++|
T Consensus 233 ~~~~aa~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~L~~~g 306 (374)
T 3uwc_A 233 DTIQAVIANRLM---NQLETITEKRRGIAHLYDQSFVDLSEFIDVPVRREGVYHVFHIYVLRV---KYRDQLFQYLKDNG 306 (374)
T ss_dssp CHHHHHHHHHHG---GGHHHHHHHHHHHHHHHHHHTGGGTTTEECCCCCTTEECCCSSEEEEE---TTHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhccCCCeEEeccCCCCCceeeEEEEEEc---CCHHHHHHHHHHCC
Confidence 444444433333 34566777788888999999988875 4432 2222 22 22333 36889999999999
Q ss_pred cEEEeCCCC----------------CC-------CCeEEEEec---ChhhHHHHHHHHhh
Q 014492 388 VMIRHYNNK----------------EL-------KGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 388 I~v~~~~~~----------------~~-------~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
|.++++... .. .+.+||++. +.++++++.++|++
T Consensus 307 i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~ 366 (374)
T 3uwc_A 307 IEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLPAHPYLTEEEINYIIKKVRE 366 (374)
T ss_dssp BCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEECCCTTSCHHHHHHHHHHHHH
T ss_pred CccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEccCCCCCCHHHHHHHHHHHHH
Confidence 999876510 00 168999875 55666666666654
No 189
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.95 E-value=3.7e-27 Score=238.28 Aligned_cols=282 Identities=12% Similarity=0.086 Sum_probs=215.2
Q ss_pred HHHHHHHHHhCCC--CCcEEEeCCHHHHHHHHHHHhcC-----CC---CeEEEcCCCchhhHHHHHHCCCeEEEecCCC-
Q 014492 133 RLRAALAKDSGLE--SDHILVGCGADELIDLIMRCVLD-----PG---DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS- 201 (423)
Q Consensus 133 ~lr~~ia~~~g~~--~~~i~~t~G~~~al~~~~~~l~~-----~g---d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~- 201 (423)
++++.+++++|.+ ++++++++|+++++.+++.++++ +| |.|+++.|+|..+...++..|++++.+|.++
T Consensus 111 ~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~g~~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v~~~~~ 190 (497)
T 3mc6_A 111 EVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHRGITEPEIIAPVTAHAGFDKAAYYFGMKLRHVELDPT 190 (497)
T ss_dssp HHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHSCCSSCEEEEETTSCHHHHHHHHHSCCEEEEECBCTT
T ss_pred HHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCccHHHHHHHHHcCCeEEEEecCcc
Confidence 4566677778887 68999999999999999998865 56 8999999999999999999999999999876
Q ss_pred CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCC-------Cch-hhhhccC
Q 014492 202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGL-------ESR-MEWVKKH 272 (423)
Q Consensus 202 ~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~-------~~~-~~~~~~~ 272 (423)
++.+|+++|++++. +++++|++++|+||||.+.+.++|.+||+. |+++|+|++|..+... +.. .......
T Consensus 191 ~~~~d~~~l~~~i~-~~~~~v~~~~p~nptG~~~~l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~ 269 (497)
T 3mc6_A 191 TYQVDLGKVKKFIN-KNTVLLVGSAPNFPHGIADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVP 269 (497)
T ss_dssp TCSBCTTTTGGGCC-SSEEEEEEETTCTTTCCCCSCTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTST
T ss_pred cCcCCHHHHHHHHh-hCCEEEEEECCCCCCCcCCCHHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCccccccCC
Confidence 78899999999997 689999999999999999999999999987 9999999999854310 000 0111123
Q ss_pred CcEEEEccChhhhcccCccccccccCHHHHHHHHHhc-CCCC------------Cc---HHHHHHHHHHhCChHHHHHHH
Q 014492 273 DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK-QPYN------------VS---VAAEVAACAALQNPIYLEKVK 336 (423)
Q Consensus 273 ~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~-~~~~------------~~---~~~~~a~~~~l~~~~~~~~~~ 336 (423)
+..+++.|++|.+ .+|.++|+++++++.+....... ..+. .+ ..++.++...+.. +.+++..
T Consensus 270 g~d~~~~s~~K~l-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~~-~~~~~~~ 347 (497)
T 3mc6_A 270 GVTSISCDTHKYG-FAPKGSSVIMYRNSDLRMHQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGE-NGYIESC 347 (497)
T ss_dssp TCCEEEEETTTTT-CCCSSCEEEECSSHHHHTTTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHHH-HHHHHHH
T ss_pred CCcEEEECchhhc-CCCCCceeEEecCHHHHhhhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHHhH-HHHHHHH
Confidence 4468888999954 47888999998776654432111 1111 11 3345555555533 4467888
Q ss_pred HHHHHHHHHHHHHHcc-CCCCeec-CCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec--ChhhH
Q 014492 337 EALIKERERLFKLLKD-VPFLNPY-PSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG--KPEHT 412 (423)
Q Consensus 337 ~~~~~~~~~l~~~L~~-~~~~~~~-p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~--~~~~~ 412 (423)
++..++++++.+.|++ ++++.+. +..++++++..+ +.+..++.+.|.++||.++.+.. +..+|++++ +.+++
T Consensus 348 ~~~~~~~~~l~~~L~~~~~g~~~~~~~~~~~v~~~~~-~~~~~~l~~~L~~~Gi~v~~~~~---~~~~ri~~~~~t~e~i 423 (497)
T 3mc6_A 348 QEIVGAAMKFKKYIQENIPDLDIMGNPRYSVISFSSK-TLNIHELSDRLSKKGWHFNALQK---PVALHMAFTRLSAHVV 423 (497)
T ss_dssp HHHHHHHHHHHHHHHHSCTTCEECSCCCSSEEEEECT-TTTHHHHHHHHHTTTCBCEECCS---SCCEEEECCTTTTCTH
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEecCCCeeEEEEeCC-CCCHHHHHHHHHhCCEEEecCCC---CCeEEEEEeCCCHHHH
Confidence 8899999999999998 6766653 566677777765 57889999999999999987653 347899887 66677
Q ss_pred HHHHHHHhh
Q 014492 413 DALMECLMH 421 (423)
Q Consensus 413 ~~l~~al~~ 421 (423)
+++.++|++
T Consensus 424 ~~~~~~L~~ 432 (497)
T 3mc6_A 424 DEICDILRT 432 (497)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777777664
No 190
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.95 E-value=6.8e-27 Score=234.35 Aligned_cols=314 Identities=15% Similarity=0.186 Sum_probs=208.6
Q ss_pred CCeeEcCCCCCCCCCCHHHHHHHhc-CCC-CCCC-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcC---
Q 014492 95 EDIVKIDANENPYGPPPEVREALGQ-LKF-PYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLD--- 168 (423)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~-~~~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~--- 168 (423)
..++|+..+... +.+.+++.+ +.. ...| +.++..+||++++++++. ++|++|+|+++++.+++.++++
T Consensus 43 ~~ylD~~~~~~~----~~v~~a~~~~~~~~~~~y~~~~~~~~l~~~la~~~~~--~~v~~t~ggt~A~~~al~~~~~~~~ 116 (467)
T 1ax4_A 43 AVYIDLLTDSGT----NAMSDHQWAAMITGDEAYAGSRNYYDLKDKAKELFNY--DYIIPAHQGRGAENILFPVLLKYKQ 116 (467)
T ss_dssp GCSEECSCSSSC----CCEEHHHHHHHHTCCCCSSSCHHHHHHHHHHHHHHCC--CEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred ceeeecccCcCC----HHHHHHHHHHHhhcccccccCccHHHHHHHHHHHcCC--CcEEEcCCcHHHHHHHHHHHHHhhc
Confidence 346777543322 344444433 122 1356 455788999999999985 6899999999999999999988
Q ss_pred -CCCe---EEEcCCCchhhHHHHHHCCCeEEEecCC----------CCCCCCHHHHHHHhhc---CCceEEEEcCCCCCc
Q 014492 169 -PGDK---IVDCPPTFTMYEFDAAVNGAAVVKVPRK----------SDFSLNVELIADAVER---EKPKCIFLTSPNNPD 231 (423)
Q Consensus 169 -~gd~---Vl~~~p~y~~~~~~~~~~g~~~~~v~~~----------~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPt 231 (423)
+||. |+++.+.|..+...+...|++++.++.+ .++.+|+++|++++++ .++++|++++|+|||
T Consensus 117 ~~Gd~~~~viv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~ 196 (467)
T 1ax4_A 117 KEGKAKNPVFISNFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSA 196 (467)
T ss_dssp HTTCCSSCEEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTT
T ss_pred cCCCccceEEEeccccchhhHHHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCC
Confidence 9998 8888777777777888899999887632 1346899999999974 368999999999999
Q ss_pred -CcCCCHHHHHHHHcC----CCEEEEccCCcc---c-------cCCCchhhhh-----ccCCcEEEEccChhhhccc-Cc
Q 014492 232 -GSIINDEDLLKILEM----PILVVLDEAYTE---F-------SGLESRMEWV-----KKHDNLIVLRTFSKRAGLA-GL 290 (423)
Q Consensus 232 -G~~~~~~~l~~i~~~----~~~li~Deay~~---~-------~~~~~~~~~~-----~~~~~~i~i~S~SK~~g~~-G~ 290 (423)
|.+++.+++++|++. |++||+||++.. + .+.+.....+ ...+ +++.|+||.+|++ |
T Consensus 197 gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d--~~~~s~sK~~g~~~G- 273 (467)
T 1ax4_A 197 GGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYAD--ALTMSAKKDPLLNIG- 273 (467)
T ss_dssp TSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCS--EEEEETTSTTCCSSC-
T ss_pred CccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhccccc--eEEEeccccCCCCcc-
Confidence 899998877766654 999999998653 0 1111111111 1122 4668999998765 4
Q ss_pred cccccccC-H-HHHHHHHHhcC------CC-CCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecC
Q 014492 291 RVGYGAFP-L-SIIEYLWRAKQ------PY-NVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYP 360 (423)
Q Consensus 291 R~G~i~~~-~-~~~~~l~~~~~------~~-~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p 360 (423)
||++.+ + ++++.+..... .+ ..+...+.++..+++. .+ ++..++..++++++.+.|++.+...+.|
T Consensus 274 --g~~~~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 349 (467)
T 1ax4_A 274 --GLVAIRDNEEIFTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTE--EEYLHYRIGQVKYLGDRLREAGIPIQYP 349 (467)
T ss_dssp --EEEEESSCHHHHHHHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTC--HHHHHHHHHHHHHHHHHHHHTTCCBCSS
T ss_pred --eEEEeCCHHHHHHHHHhhccccccccccCCccchHHHHHHHHHHHhhh--hhHHHHHHHHHHHHHHHHHhCCCCcccC
Confidence 677777 6 78777654321 12 2343333333323321 11 1122223356677888887643222357
Q ss_pred CCceEEEEE-------eCC-CCCHHHHHHHH-HhCCcEEEe-CCC------------CCCCCeEEEEec----ChhhHHH
Q 014492 361 SYSNFILCE-------VTS-GMDAKKLKDDL-AKMGVMIRH-YNN------------KELKGYVRVSVG----KPEHTDA 414 (423)
Q Consensus 361 ~~~~~~~~~-------~~~-~~~~~~l~~~L-~~~gI~v~~-~~~------------~~~~~~iRis~~----~~~~~~~ 414 (423)
.+++++|++ ++. +.+..++.+.| .++||.+.+ +.. ....+++||+++ +.+++++
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~ 429 (467)
T 1ax4_A 350 TGGHAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDY 429 (467)
T ss_dssp CCSSEEEEESTTTCTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHH
T ss_pred CCceEEEEehhhhccccccCCCCHHHHHHHHHHhcCceeeecCccccccccccccccccccceEEEecccccCCHHHHHH
Confidence 788999998 432 34578899999 799999988 321 012479999987 2455566
Q ss_pred HHHHHhh
Q 014492 415 LMECLMH 421 (423)
Q Consensus 415 l~~al~~ 421 (423)
+.++|++
T Consensus 430 ~~~~l~~ 436 (467)
T 1ax4_A 430 IADALIG 436 (467)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 6655554
No 191
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.95 E-value=1.3e-27 Score=238.84 Aligned_cols=310 Identities=14% Similarity=0.076 Sum_probs=200.2
Q ss_pred CCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCCC--CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHH
Q 014492 92 RKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC 165 (423)
Q Consensus 92 ~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~--~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~ 165 (423)
..+++++||..+. ++++ ++|++.+++.+ +... ++|+..-..++.+.+++.++ .+++|++++|+++++..+++.
T Consensus 54 ~~g~~~iD~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~~v~~~~gg~eA~~~al~~ 132 (453)
T 2cy8_A 54 VDGNVYLDFFGGHGALVLGHGHPRVNAAIAEALSHGVQYAASHPLEVRWAERIVAAFP-SIRKLRFTGSGTETTLLALRV 132 (453)
T ss_dssp TTCCEEEESCTTTTSCTTCBTCHHHHHHHHHHHTTTCSSCSSCHHHHHHHHHHHHHCT-TCSEEEEESCHHHHHHHHHHH
T ss_pred CCCCEEEECcccHhhcccCCCCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHhhCC-CCCEEEEeCCHHHHHHHHHHH
Confidence 3456789998875 4454 67899998876 3222 23444334556666666666 678999999999999999987
Q ss_pred ---hcCCCCeEEEcCCCchhhHHHHHH-----------CCC------eEEEecCCCCCCCCHHHHHHHhhc--CCceEEE
Q 014492 166 ---VLDPGDKIVDCPPTFTMYEFDAAV-----------NGA------AVVKVPRKSDFSLNVELIADAVER--EKPKCIF 223 (423)
Q Consensus 166 ---l~~~gd~Vl~~~p~y~~~~~~~~~-----------~g~------~~~~v~~~~~~~~d~~~l~~~i~~--~~~~~i~ 223 (423)
+.++ +.|++.+|+|+.+...+.. .|+ .++.+|. .|++++++.+++ .++++|+
T Consensus 133 ar~~~~~-~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~vi 206 (453)
T 2cy8_A 133 ARAFTGR-RMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRP-----DDIEGMREVFANHGSDIAAFI 206 (453)
T ss_dssp HHHHHCC-CEEEEECC----------------------------CGGGEEEECT-----TCHHHHHHHHHHHGGGEEEEE
T ss_pred HHHhhCC-CEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCC-----CCHHHHHHHHHhcCCCEEEEE
Confidence 5554 6788888999865443221 133 2333332 389999999864 3567776
Q ss_pred EcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCc-hhhhhccCCcEEEEccChhhhcccCcccccccc
Q 014492 224 LTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLES-RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF 297 (423)
Q Consensus 224 l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~-~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~ 297 (423)
++..+||||.+.+ .+++.++|+. |++||+||+|.++..+.. .....+...++ .|+||.++ +|+|+||+++
T Consensus 207 ~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~~~g~~~~~~~~~~~~di---~s~sK~l~-~G~~~G~v~~ 282 (453)
T 2cy8_A 207 AEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGFRVGNHGMQALLDVQPDL---TCLAKASA-GGLPGGILGG 282 (453)
T ss_dssp ECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTCTTHHHHHHTCCCSE---EEEEGGGG-TTSSCEEEEE
T ss_pred ECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCccccccCchhhhHHhCCCCcE---EEEChhhh-CCcceEEEec
Confidence 6555688998776 5566666665 999999999997732221 11122222332 38999998 5999999999
Q ss_pred CHHHHHHHHH-------hcCCCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccC----CCCeecCCCceE
Q 014492 298 PLSIIEYLWR-------AKQPYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDV----PFLNPYPSYSNF 365 (423)
Q Consensus 298 ~~~~~~~l~~-------~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~p~~~~~ 365 (423)
++++++.+.. ....++.+++++.++.++|+. . .++..++++++++++.+.|+++ +.....++.|+|
T Consensus 283 ~~~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~ 360 (453)
T 2cy8_A 283 REDVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTIL--EDDVCAKINDLGQFAREAMNHLFARKGLNWLAYGRFSG 360 (453)
T ss_dssp CHHHHTTSSSCC---------CCCCHHHHHHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCTTE
T ss_pred hHHHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeE
Confidence 9998887654 123467889999888888864 2 2445667777777777777653 544434667889
Q ss_pred EEEEeCC-----C--------------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHh
Q 014492 366 ILCEVTS-----G--------------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLM 420 (423)
Q Consensus 366 ~~~~~~~-----~--------------~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~ 420 (423)
+|+++++ . .+..++.+.|.++||.+.++ +.+|+++. +.++++++.++|+
T Consensus 361 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gv~v~~~------~~~~l~~~~t~~~i~~~l~~l~ 429 (453)
T 2cy8_A 361 FHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALILEGVDIGGR------GSVFLSAQHEREHVEHLVTTFD 429 (453)
T ss_dssp EEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHHHTTEECBTT------TEEECCTTCCHHHHHHHHHHHH
T ss_pred EEEEEeccccccccccccccccccccHHHHHHHHHHHHHCCeEEeCC------CCEEeeccCCHHHHHHHHHHHH
Confidence 9999974 1 12567889999999999543 24777644 3444444444443
No 192
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.95 E-value=7.1e-28 Score=240.39 Aligned_cols=316 Identities=13% Similarity=0.096 Sum_probs=215.2
Q ss_pred CCCCCeeEcCCCC--CCCC-CCHHHH-H-HHhc---C-CCC----CCCCCcchHHHHHHHHHHhC-CCCCcEEEeCCHHH
Q 014492 92 RKPEDIVKIDANE--NPYG-PPPEVR-E-ALGQ---L-KFP----YIYPDPESRRLRAALAKDSG-LESDHILVGCGADE 157 (423)
Q Consensus 92 ~~~~~~i~l~~~~--~~~~-~~~~v~-~-al~~---~-~~~----~~Y~~~g~~~lr~~ia~~~g-~~~~~i~~t~G~~~ 157 (423)
..++.++|+..+. ++++ .+|++. + ++.+ . ... ..|+.....++++.++++++ ..+++|++++|+++
T Consensus 51 ~~g~~ylD~~~~~~~~~lG~~~p~v~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~la~~la~~~~~~~~~~v~~~~~gse 130 (449)
T 2cjg_A 51 ITGRRYLDMFTFVASSALGMNPPALVDDREFHAELMQAALNKPSNSDVYSVAMARFVETFARVLGDPALPHLFFVEGGAL 130 (449)
T ss_dssp TTCCEEEESSHHHHTCSSCBSCHHHHTCHHHHHHHHHHHTCCCCTTTCCCHHHHHHHHHHHHHHCCTTCCEEEEESSHHH
T ss_pred CCCcEEEEccCCccccCCCCCCHHHHHHHHHHHHHHHHHhcCCCCcccCCHHHHHHHHHHHHhcCCCCCCEEEEeCchHH
Confidence 4566788986653 5666 379999 8 7765 2 111 23555556789999999997 56789999999999
Q ss_pred HHHHHHHHhc---C----------C-CCeEEEcCCCchhhHHHHHH---------CC-----CeEEEecCCC--CC----
Q 014492 158 LIDLIMRCVL---D----------P-GDKIVDCPPTFTMYEFDAAV---------NG-----AAVVKVPRKS--DF---- 203 (423)
Q Consensus 158 al~~~~~~l~---~----------~-gd~Vl~~~p~y~~~~~~~~~---------~g-----~~~~~v~~~~--~~---- 203 (423)
+++.+++.+. + + ||+|++..|+|+.+...+.. .+ ..++.+|.++ ..
T Consensus 131 A~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 210 (449)
T 2cjg_A 131 AVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAM 210 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHH
T ss_pred HHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCCchhhcccc
Confidence 9999987542 2 2 89999999999865432211 12 2566666533 11
Q ss_pred ----CCCHHHHHHHhhc--CCceEEEEcCCCCCcCc-CCCHHHHHHHHc---C-CCEEEEccCCccccCCCch--hhhhc
Q 014492 204 ----SLNVELIADAVER--EKPKCIFLTSPNNPDGS-IINDEDLLKILE---M-PILVVLDEAYTEFSGLESR--MEWVK 270 (423)
Q Consensus 204 ----~~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~-~~~~~~l~~i~~---~-~~~li~Deay~~~~~~~~~--~~~~~ 270 (423)
..++++|++.+++ .++++|+++.++||||. +++.+++++|++ . |+++|+||+|.++...+.. ....+
T Consensus 211 ~~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~ 290 (449)
T 2cjg_A 211 AALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLD 290 (449)
T ss_dssp HHHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSTHHHHT
T ss_pred chhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCcceeecccC
Confidence 1456778888852 56778776666799995 666666666554 3 9999999999987643321 22223
Q ss_pred cCCcEEEEccChhhhcccCccccccccCHHHHHHHH-----H--hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 014492 271 KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW-----R--AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKER 343 (423)
Q Consensus 271 ~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~-----~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 343 (423)
..++++ |+||.+ |+||+++++++++.+. . ....++.+++++.++.++|+..+- +...+++++++
T Consensus 291 ~~~di~---t~sK~l-----~iG~~~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal~~~~~-~~~~~~~~~~~ 361 (449)
T 2cjg_A 291 VAPDIV---AFGKKT-----QVCGVMAGRRVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVIEA-EGLFERAVQHG 361 (449)
T ss_dssp CCCSEE---EECGGG-----SSEEEEECGGGGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHHHHHHH-HTHHHHHHHHH
T ss_pred CCceEE---EecCcc-----cEEEEEECHHHhhhhhhcccCCcccccCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHH
Confidence 333433 689977 7999999998877521 1 123467889999999988864211 34567777788
Q ss_pred HHHHHHHcc----CCC-CeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHH
Q 014492 344 ERLFKLLKD----VPF-LNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDAL 415 (423)
Q Consensus 344 ~~l~~~L~~----~~~-~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l 415 (423)
+++.+.|++ ++. +...++.|+|+++++++..+..++.+.|.++||.+.+++ .+++||+++ +.++++++
T Consensus 362 ~~l~~~L~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g----~~~iRi~~~~~~t~e~i~~~ 437 (449)
T 2cjg_A 362 KYLRARLDELAADFPAVVLDPRGRGLMCAFSLPTTADRDELIRQLWQRAVIVLPAG----ADTVRFRPPLTVSTAEIDAA 437 (449)
T ss_dssp HHHHHHHHHHHHHSTTTSEEEEEETTEEEEECSSHHHHHHHHHHHHHTTEECEEET----TTEEEECCCTTCCHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCceeeEeeccEEEEEEECChHHHHHHHHHHHHCCeEEecCC----CCEEEEECCCCCCHHHHHHH
Confidence 888888765 353 443456688888998643346789999999999999874 589999765 34444444
Q ss_pred HHHHh
Q 014492 416 MECLM 420 (423)
Q Consensus 416 ~~al~ 420 (423)
.++|+
T Consensus 438 l~~l~ 442 (449)
T 2cjg_A 438 IAAVR 442 (449)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 193
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.95 E-value=4.4e-27 Score=230.55 Aligned_cols=280 Identities=15% Similarity=0.139 Sum_probs=202.0
Q ss_pred CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHH----HHHHCCCeEEEecCC
Q 014492 125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRK 200 (423)
Q Consensus 125 ~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~ 200 (423)
+|+++...++|+++++++|.+ + .+++++++++++.++. ++++||+|+++.|.|..... .++..|++++.+|.+
T Consensus 51 ~~~~~~~~~lr~~la~~~g~~-~-~i~~~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~ 127 (393)
T 1n8p_A 51 RSQNPNRENLERAVAALENAQ-Y-GLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTNDL 127 (393)
T ss_dssp TTCCHHHHHHHHHHHHHTTCS-E-EEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEESSH
T ss_pred cCCChhHHHHHHHHHHHhCCC-c-EEEECChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEeCCC
Confidence 456667889999999999975 4 4444555899999999 99999999999999984333 345579999999863
Q ss_pred CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-----CCEEEEccCCccccCCCchhhhhccCCcE
Q 014492 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-----PILVVLDEAYTEFSGLESRMEWVKKHDNL 275 (423)
Q Consensus 201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-----~~~li~Deay~~~~~~~~~~~~~~~~~~~ 275 (423)
| ++++++++ +++++|++++|+||||.+++.+++.++|+. |+++|+|++|..+... ... ..+.+
T Consensus 128 -----d-~~l~~~i~-~~t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD~a~~~~~~~-~~~----~~~~d 195 (393)
T 1n8p_A 128 -----L-NDLPQLIK-ENTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYIS-NPL----NFGAD 195 (393)
T ss_dssp -----H-HHHHHHSC-SSEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHHC-CGG----GGTCS
T ss_pred -----h-HHHHHhcc-cCceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEeCCccccccC-CHH----HcCCe
Confidence 7 89999997 689999999999999999999999999974 8999999999976542 221 22466
Q ss_pred EEEccChhhhcccCccc-ccccc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHc
Q 014492 276 IVLRTFSKRAGLAGLRV-GYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLK 351 (423)
Q Consensus 276 i~i~S~SK~~g~~G~R~-G~i~~-~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~ 351 (423)
+++.|+||.+|.+|+|+ ||+++ ++++++.+...... ...++..+.++...++. +....++..++++.+.+.|+
T Consensus 196 i~~~S~sK~~g~~G~rigG~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~L~ 272 (393)
T 1n8p_A 196 IVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQNAIGAIPSPFDAWLTHRGLKT---LHLRVRQAALSANKIAEFLA 272 (393)
T ss_dssp EEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEECcccccCCCCceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccch---HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 99998 58888888765432 34566666666666643 44555666777888888887
Q ss_pred cCCC-Ce-e-cC----------------C-C-ceEEEEEeCCC-CCHHHHHHHHHhCCcEEEeCC----------CC---
Q 014492 352 DVPF-LN-P-YP----------------S-Y-SNFILCEVTSG-MDAKKLKDDLAKMGVMIRHYN----------NK--- 396 (423)
Q Consensus 352 ~~~~-~~-~-~p----------------~-~-~~~~~~~~~~~-~~~~~l~~~L~~~gI~v~~~~----------~~--- 396 (423)
+.+. +. + .| + . ++++++.+++. .+...+.+.|...++.++.|+ ..
T Consensus 273 ~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~l~~l~~~~~~~s~G~~~s~~~~p~~~~h~~ 352 (393)
T 1n8p_A 273 ADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGAEAASKFASSTRLFTLAESLGGIESLLEVPAVMTHGG 352 (393)
T ss_dssp SCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCHHHHHHHHHHCSSSEECSCCCCSSCEEECTTTTTSCS
T ss_pred hCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCcHHHHHHHHhhCCcceECCCCCCCcceeeccccccccc
Confidence 7654 22 1 22 1 3 67889999732 234445555433344443221 10
Q ss_pred ----------CCCCeEEEEecChh---hHHHHHHHHhhh
Q 014492 397 ----------ELKGYVRVSVGKPE---HTDALMECLMHL 422 (423)
Q Consensus 397 ----------~~~~~iRis~~~~~---~~~~l~~al~~l 422 (423)
..++.||||++..+ +.+++.++|+++
T Consensus 353 ~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~~ 391 (393)
T 1n8p_A 353 IPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQA 391 (393)
T ss_dssp SCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred cCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 11479999998543 445566666543
No 194
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.95 E-value=1.3e-26 Score=234.17 Aligned_cols=312 Identities=14% Similarity=0.049 Sum_probs=224.4
Q ss_pred CCCCHHHHHHHhcC-CCC-CCC-CCcchH----HHHHHHHHHhCCC--CCcEE---EeCCHHHHHHHHHHHhcCC-----
Q 014492 107 YGPPPEVREALGQL-KFP-YIY-PDPESR----RLRAALAKDSGLE--SDHIL---VGCGADELIDLIMRCVLDP----- 169 (423)
Q Consensus 107 ~~~~~~v~~al~~~-~~~-~~Y-~~~g~~----~lr~~ia~~~g~~--~~~i~---~t~G~~~al~~~~~~l~~~----- 169 (423)
..++|.+.+++.+. ... ..| ..++.. ++++.+++++|++ ++++. +|+|+++++.+++.++..+
T Consensus 66 ~~~~~~v~~~l~~~~~~~~~~~~~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~ 145 (502)
T 3hbx_A 66 TWMEPECDKLIMSSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKR 145 (502)
T ss_dssp CCCCHHHHHHHHHTTTCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhccCCCChhcChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHHHHHhHHH
Confidence 44578888888763 221 112 222222 5677788889987 55544 5899999999998877655
Q ss_pred ---CC-----eEEEcCCCchhhHHHHHHCCCeEEEecCCCC-CCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHH
Q 014492 170 ---GD-----KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD-FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL 240 (423)
Q Consensus 170 ---gd-----~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l 240 (423)
|+ .|+++.++|..+...++..|++++.+|.+++ +.+|++++++++. +++++|++++|+||||.+.+.++|
T Consensus 146 ~~~G~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~-~~t~~v~~~~~~n~tG~~~~l~~I 224 (502)
T 3hbx_A 146 KAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPQQAVDMVD-ENTICVAAILGSTLNGEFEDVKLL 224 (502)
T ss_dssp HHTTCCCSCCEEEEETTCCHHHHHHHHHTTCEEEEECCBTTBCSCCHHHHHHHCC-TTEEEEEEEBSCTTTCCBCCHHHH
T ss_pred HhcCCCCCCcEEEEcCCchHHHHHHHHHcCceeEEEecCCCcCcCCHHHHHHHHh-hCCEEEEEecCCCCCCcccCHHHH
Confidence 76 8999999999999999999999999997654 8899999999997 689999999999999999999999
Q ss_pred HHHHcC-------CCEEEEccCCccccC---CCchhhhhccCCcEEEEccChhhhcccCccccccccC-HHHHHHHHHhc
Q 014492 241 LKILEM-------PILVVLDEAYTEFSG---LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAK 309 (423)
Q Consensus 241 ~~i~~~-------~~~li~Deay~~~~~---~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~-~~~~~~l~~~~ 309 (423)
.++|+. |+++++|++|..+.. .+.....+....-.++..+.+|. ++++.++|+++.. ++.+.......
T Consensus 225 ~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~~~~~D~v~~s~hK~-l~~p~g~G~~~~~~~~~l~~~~~~~ 303 (502)
T 3hbx_A 225 NDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKY-GLVYAGIGWVIWRNKEDLPEELIFH 303 (502)
T ss_dssp HHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTT-TCCCSSCEEEEESSGGGSCGGGCEE
T ss_pred HHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccCCCCceEEEECcccc-cCCCCCeEEEEEeCHHHhhHHhccC
Confidence 999973 899999999986541 11111111123445677788995 4577889987764 44432221111
Q ss_pred CC------------CCC---cHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecC--CCceEEEEEeCC
Q 014492 310 QP------------YNV---SVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYP--SYSNFILCEVTS 372 (423)
Q Consensus 310 ~~------------~~~---~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p--~~~~~~~~~~~~ 372 (423)
.. ++. ..+++.++...+.. +.+.+..++..++++++.+.|++++.+.+.+ ...+++.+++++
T Consensus 304 ~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~ 382 (502)
T 3hbx_A 304 INYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGH-EGYRNVMENCRENMIVLREGLEKTERFNIVSKDEGVPLVAFSLKD 382 (502)
T ss_dssp ECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTTCEEECSCSSSSSEEEEEESS
T ss_pred cccccCCCCCccccCCchHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCCCceEEEEEecC
Confidence 11 111 23344444444433 3457778888899999999999998666543 477889999874
Q ss_pred --CCCHHHHHHHHHhCCcEEEeCCCC---CCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 373 --GMDAKKLKDDLAKMGVMIRHYNNK---ELKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 373 --~~~~~~l~~~L~~~gI~v~~~~~~---~~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
..+..++.+.|.++||.+..+..+ ....++||+++ +.++++.|.++|++
T Consensus 383 ~~~~~~~~l~~~L~~~Gi~v~~~~~p~~~~~~~~lRisv~~~~t~edid~li~~L~~ 439 (502)
T 3hbx_A 383 SSCHTEFEISDMLRRYGWIVPAYTMPPNAQHITVLRVVIREDFSRTLAERLVIDIEK 439 (502)
T ss_dssp CSSCCHHHHHHHHHTTTCBCCEEECCTTCTTCEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHhCCcEEeeccCCcccCCceEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 256779999999999998654332 23468999998 67777888777764
No 195
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.95 E-value=3.9e-26 Score=227.69 Aligned_cols=317 Identities=13% Similarity=0.082 Sum_probs=218.7
Q ss_pred CeeEcCCCCCCCCCCHHHHHHHhcC---CCCCCCCCc----c---h---HHHH-HHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492 96 DIVKIDANENPYGPPPEVREALGQL---KFPYIYPDP----E---S---RRLR-AALAKDSGLESDHILVGCGADELIDL 161 (423)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~---~~~~~Y~~~----g---~---~~lr-~~ia~~~g~~~~~i~~t~G~~~al~~ 161 (423)
+.|+|..++++. +|++.+++.+. .+..+||.. + . +++. +.+++++|.+.. .++++|+++++..
T Consensus 46 ~~i~l~~~~~~~--~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~g~~~~-~v~~~sGs~a~~~ 122 (447)
T 3h7f_A 46 DTLEMIASENFV--PRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALFGAEFA-NVQPHSGAQANAA 122 (447)
T ss_dssp HSEECCTTCCCC--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEE-ECCCSSHHHHHHH
T ss_pred CceeEecCCCCC--CHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHHHHcCCCce-EEEeCCHHHHHHH
Confidence 458998877765 89999999763 222334321 1 1 2334 888889997652 3336777889999
Q ss_pred HHHHhcCCCCeEEEcCCCchhh-HH--H--HHHCCCeEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCC
Q 014492 162 IMRCVLDPGDKIVDCPPTFTMY-EF--D--AAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII 235 (423)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~-~~--~--~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~ 235 (423)
++.+++++||+|+++.|+|..+ .. . ..-.+..++.++.+ +++.+|++++++.+.+.++++|++++|+||++.
T Consensus 123 a~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~i~~~~~~~~~~~-- 200 (447)
T 3h7f_A 123 VLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDPATHLIDMDAVRATALEFRPKVIIAGWSAYPRVL-- 200 (447)
T ss_dssp HHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCTTTCSCCHHHHHHHHHHHCCSEEEEECSSCCSCC--
T ss_pred HHHHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEcCcCcccCCcCHHHHHHHHHhcCCeEEEEcCCCCCCcc--
Confidence 9999999999999999998762 11 1 11134567777754 456899999999996567899999999999886
Q ss_pred CHHHHHHHHcC-CCEEEEccCCcc-ccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCC-
Q 014492 236 NDEDLLKILEM-PILVVLDEAYTE-FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY- 312 (423)
Q Consensus 236 ~~~~l~~i~~~-~~~li~Deay~~-~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~- 312 (423)
+.+++.++|+. |+++|+||+|.. +.+.+....... ...+++.|+||.+ +|+|.||+++++++++.+.....++
T Consensus 201 ~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~~--~~di~~~s~sK~l--~G~~gG~i~~~~~~~~~l~~~~~~~~ 276 (447)
T 3h7f_A 201 DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPVP--HADVVSTTVHKTL--GGGRSGLIVGKQQYAKAINSAVFPGQ 276 (447)
T ss_dssp CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTT--TCSEEEEESSGGG--CCCSCEEEEECGGGHHHHHHHHTTTT
T ss_pred CHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCCC--CCcEEEecCCcCC--CCCCeEEEEECHHHHHHHhhhcCCcc
Confidence 88999999988 999999999753 222111111111 1237899999976 5889999999999988887765543
Q ss_pred --CCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccC----CCCeec--CCCceEEEEEeCC-CCCHHHHHH
Q 014492 313 --NVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDV----PFLNPY--PSYSNFILCEVTS-GMDAKKLKD 381 (423)
Q Consensus 313 --~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~--p~~~~~~~~~~~~-~~~~~~l~~ 381 (423)
+.+...+.++..++.. .+++++.++++.++++++.+.|++. +++.+. +..++++|+++.. +.+...+.+
T Consensus 277 ~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (447)
T 3h7f_A 277 QGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVSGGTDVHLVLVDLRDSPLDGQAAED 356 (447)
T ss_dssp CSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGGGSCSSSEEEEECTTSSCCHHHHHH
T ss_pred cCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEecCCCCCCEEEEEcCCCCCCHHHHHH
Confidence 2333334444444332 3467888999999999999999876 224443 3577889998853 557777778
Q ss_pred HHHhCCcEEE----eCC--CCCCCCeEEEEec-------ChhhHHHHHHHHhh
Q 014492 382 DLAKMGVMIR----HYN--NKELKGYVRVSVG-------KPEHTDALMECLMH 421 (423)
Q Consensus 382 ~L~~~gI~v~----~~~--~~~~~~~iRis~~-------~~~~~~~l~~al~~ 421 (423)
.|.++||.++ ++. .+..++++||++. ++++++++.++|++
T Consensus 357 ~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~l~~ 409 (447)
T 3h7f_A 357 LLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADIIAT 409 (447)
T ss_dssp HHHHTTEECBC-------------CEEEEECHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHHHHHHH
Confidence 7888899998 552 2445678999873 34566666666554
No 196
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.95 E-value=5.9e-26 Score=224.39 Aligned_cols=280 Identities=19% Similarity=0.164 Sum_probs=199.8
Q ss_pred CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHH----HHHHCCCeEEEecCC
Q 014492 125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRK 200 (423)
Q Consensus 125 ~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~ 200 (423)
+|+++...+|++++++++|.+. .++++++++++..++.+++++||+|+++.|+|..+.. .++..|++++.++.+
T Consensus 78 r~~~p~~~~le~~lA~l~g~~~--~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~~~ 155 (430)
T 3ri6_A 78 RSSNPTVEDLEQRLKNLTGALG--VLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVDVM 155 (430)
T ss_dssp --CCHHHHHHHHHHHHHHTCSE--EEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEECTT
T ss_pred CCCCHHHHHHHHHHHHHHCCCc--EEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCC
Confidence 4577778999999999999643 4555566799999999999999999999999987766 567799999999864
Q ss_pred CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEc
Q 014492 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR 279 (423)
Q Consensus 201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~ 279 (423)
|+++++++++ +++++|++++|+||||.+.+.+++.++|+. |+++|+|++|...... ... ..+.++++.
T Consensus 156 -----d~~~l~~ai~-~~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~~~~~~-~~~----~~g~div~~ 224 (430)
T 3ri6_A 156 -----DSLAVEHACD-ETTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMTPPYLL-EAK----RLGVDIEVL 224 (430)
T ss_dssp -----CHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTSCTTTC-CGG----GGTCSEEEE
T ss_pred -----CHHHHHHhhC-CCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccC-ChH----HcCCEEEEE
Confidence 8999999997 689999999999999999999999999998 9999999999855431 111 233458999
Q ss_pred cChhhhcccCcccccccc---CHH------------------HHHHHHHh---cCCCCCcHHHHHHHHHHhCChHHHHHH
Q 014492 280 TFSKRAGLAGLRVGYGAF---PLS------------------IIEYLWRA---KQPYNVSVAAEVAACAALQNPIYLEKV 335 (423)
Q Consensus 280 S~SK~~g~~G~R~G~i~~---~~~------------------~~~~l~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~ 335 (423)
|+||.++.+|..+|.++. +.. +++++... .....+++.....+... .+.+..+
T Consensus 225 S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~~~g~~~~~~~a~l~l~~---l~~l~~r 301 (430)
T 3ri6_A 225 SSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQNLGPSLSPHNAYLQSLG---LETMALR 301 (430)
T ss_dssp ECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHH---HHHHHHH
T ss_pred CCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHhh---hhhHHHH
Confidence 999999866655544433 211 12222211 11123455544433333 3556666
Q ss_pred HHHHHHHHHHHHHHHccCCCCe-e-cCC---------------Cce-EEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC-
Q 014492 336 KEALIKERERLFKLLKDVPFLN-P-YPS---------------YSN-FILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK- 396 (423)
Q Consensus 336 ~~~~~~~~~~l~~~L~~~~~~~-~-~p~---------------~~~-~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~- 396 (423)
.++..++..++.+.|++.+.+. + +|+ .|. .+++++++..+...|.+.|...++.+..|+..
T Consensus 302 ~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~~~~~~~~~~~~l~~~~~~~s~G~~~s 381 (430)
T 3ri6_A 302 IERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELESKEASYRFMDALKLIRRATNIHDNKS 381 (430)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECSSHHHHHHHHHHCSSSEECSCCSCSSC
T ss_pred HHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCHHHHHHHHHhCCcceecCCCCCCCc
Confidence 7777889999999999887665 3 343 144 89999973344556666665445545444321
Q ss_pred ----------------------CCCCeEEEEecChhhHHHHHHHHhh
Q 014492 397 ----------------------ELKGYVRVSVGKPEHTDALMECLMH 421 (423)
Q Consensus 397 ----------------------~~~~~iRis~~~~~~~~~l~~al~~ 421 (423)
..+++||||++.++ .++|.+.|++
T Consensus 382 li~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG~E~-~~dl~~dl~~ 427 (430)
T 3ri6_A 382 LILSPYHVIYALNSHEERLKLEISPAMMRLSVGIEE-IEDLKEDILQ 427 (430)
T ss_dssp EEECTGGGC---------CGGGSCTTEEEEECCSSC-HHHHHHHHHH
T ss_pred eeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCC-HHHHHHHHHH
Confidence 23679999999766 4777777664
No 197
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.95 E-value=7.6e-26 Score=224.96 Aligned_cols=312 Identities=15% Similarity=0.141 Sum_probs=220.8
Q ss_pred CCCeeEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh------
Q 014492 94 PEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV------ 166 (423)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l------ 166 (423)
+.++|.|+. +++ .+++.+++.+ +.....|++++..++|+++++++|.+ ++++++|+++++..++.++
T Consensus 30 ~~~~i~~~~--~~~--~~~~~~a~~~~~~~~~~~~~~~~~~l~~~la~~~g~~--~~i~~~sGt~a~~~al~~l~~~~~~ 103 (437)
T 3bb8_A 30 GKSVVPPSG--KVI--GTKELQLMVEASLDGWLTTGRFNDAFEKKLGEYLGVP--YVLTTTSGSSANLLALTALTSPKLG 103 (437)
T ss_dssp TTSCBCSCC--CCC--CHHHHHHHHHHHHHCCCBSCHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHTTCGGGG
T ss_pred CCccccCCC--CCC--CHHHHHHHHHHHHcCCcCCChHHHHHHHHHHHHHCCC--cEEEeCCHHHHHHHHHHHhhhcccc
Confidence 345677753 333 3667777655 22224457778899999999999975 5677777789999999988
Q ss_pred ---cCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC-CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHH
Q 014492 167 ---LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK 242 (423)
Q Consensus 167 ---~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~ 242 (423)
+++||+|+++.|+|..+...++..|++++.++.+. ++.+|++++++.+. +++++|++++ ++|...+.+++.+
T Consensus 104 ~~~~~~gd~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~-~~~~~v~~~~---~~g~~~~~~~i~~ 179 (437)
T 3bb8_A 104 VRALKPGDEVITVAAGFPTTVNPTIQNGLIPVFVDVDIPTYNVNASLIEAAVS-DKTKAIMIAH---TLGNLFDLAEVRR 179 (437)
T ss_dssp GGSCCTTCEEEECSSSCHHHHHHHHHTTCEEEECCEETTTTEECGGGHHHHCC-TTEEEEEEEC---GGGCCCCHHHHHH
T ss_pred cccCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEeccCccCCcCHHHHHHhcC-CCCeEEEEeC---CCCChhcHHHHHH
Confidence 78999999999999999999999999999999754 67899999999996 6899999985 3455689999999
Q ss_pred HHcC-CCEEEEccCCcccc-CCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHH-HHhc---C------
Q 014492 243 ILEM-PILVVLDEAYTEFS-GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYL-WRAK---Q------ 310 (423)
Q Consensus 243 i~~~-~~~li~Deay~~~~-~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l-~~~~---~------ 310 (423)
+|+. |+++|+|++|..+. +.... .....+ +++.||+|.++++|.|.|+++++++.+..+ .... .
T Consensus 180 l~~~~~~~li~D~a~~~g~~~~~~~---~~~~~d-~~~~s~~~~k~l~~g~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (437)
T 3bb8_A 180 VADKYNLWLIEDCCDALGSTYDGKM---AGTFGD-IGTVSFYPAKHITMGEGGAVFTQSAELKSIIESFRDWGRDCYCAP 255 (437)
T ss_dssp HHHHHTCEEEEECTTCTTCEETTEE---TTSSSS-EEEEECSTTSSSCCSSCEEEEESCHHHHHHHHHHHBTTBCC----
T ss_pred HHHHcCCEEEEECccccCceECCee---cccccC-EEEEECcCCcCCCCCCeEEEEeCCHHHHHHHHHHHHhCccccccc
Confidence 9987 99999999998543 21111 111122 777899888888999999999986554432 2210 0
Q ss_pred ------------------------------CC--CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCee
Q 014492 311 ------------------------------PY--NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNP 358 (423)
Q Consensus 311 ------------------------------~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 358 (423)
.+ .++.+...++...|+. +++..++.+++++++.+.|++++++.+
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~---~~~~~~~~~~~~~~l~~~L~~~~g~~~ 332 (437)
T 3bb8_A 256 GCDNTCKKRFGQQLGSLPFGYDHKYTYSHLGYNLKITDMQAACGLAQLER---IEEFVEKRKANFKYLKDALQSCADFIE 332 (437)
T ss_dssp ------------CCSCCCTTCCGGGCBCSCCCBCCCBHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHGGGGTTTEE
T ss_pred ccccccccccccccccccccccccccccccCcccCCCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHhhccCCccc
Confidence 01 1345555555555532 344455557788899999988754443
Q ss_pred cCC--------CceEEE-EEeCCCCCHHHHHHHHHhCCcEEEeCCCCCC------------------------CCeEEEE
Q 014492 359 YPS--------YSNFIL-CEVTSGMDAKKLKDDLAKMGVMIRHYNNKEL------------------------KGYVRVS 405 (423)
Q Consensus 359 ~p~--------~~~~~~-~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~------------------------~~~iRis 405 (423)
.|. ..+|++ ++.+.+.+.+++.+.|.++||.++.+..+.. .+.|||+
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~GI~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~lrl~ 412 (437)
T 3bb8_A 333 LPEATENSDPSWFGFPITLKEDSGVSRIDLVKFLDEAKVGTRLLFAGNLTRQPYFHDVKYRVVGELTNTDRIMNQTFWIG 412 (437)
T ss_dssp CCCCCTTEECCCSSEEEEECGGGSSCHHHHHHHHHHTTBCCBCCTTSSGGGSGGGSSCCCEECSCCHHHHHHHHHEEEEC
T ss_pred cCCCCCCCceeeEEEEEEECCcCcCcHHHHHHHHHHCCCceeccCCcccccCchhhccCccccCCCcHHHHHhcCEEEec
Confidence 331 123444 5543356889999999999999987643110 1248998
Q ss_pred ec---ChhhHHHHHHHHhhh
Q 014492 406 VG---KPEHTDALMECLMHL 422 (423)
Q Consensus 406 ~~---~~~~~~~l~~al~~l 422 (423)
+. +.++++++.++|+++
T Consensus 413 ~~~~~t~~di~~i~~~l~~~ 432 (437)
T 3bb8_A 413 IYPGLTHDHLDYVVSKFEEF 432 (437)
T ss_dssp CSTTCCHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHH
Confidence 75 566677777777653
No 198
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.95 E-value=3.8e-26 Score=221.83 Aligned_cols=296 Identities=16% Similarity=0.142 Sum_probs=220.0
Q ss_pred CHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCeEEEcCCCchhhHHHH
Q 014492 110 PPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDA 187 (423)
Q Consensus 110 ~~~v~~al~~~-~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~ 187 (423)
++++.+++.+. .....++.++..++|+++++++|.+ ++++++|+++++..++..+ +++||+|+++.|+|..+...+
T Consensus 15 ~~~v~~a~~~~~~~~~~~~~~~~~~l~~~la~~~~~~--~~~~~~sGt~al~~al~~~~~~~gd~Vi~~~~~~~~~~~~~ 92 (367)
T 3nyt_A 15 KDKIDAGIQRVLRHGQYILGPEVTELEDRLADFVGAK--YCISCANGTDALQIVQMALGVGPGDEVITPGFTYVATAETV 92 (367)
T ss_dssp HHHHHHHHHHHHHHCCCSSCHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHH
T ss_pred CHHHHHHHHHHHhcCCccCChHHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHhCCCCcCEEEECCCccHHHHHHH
Confidence 46677777663 2223336677899999999999974 7999999999999999998 899999999999999999999
Q ss_pred HHCCCeEEEecCCCC-CCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCcccc-CCCc
Q 014492 188 AVNGAAVVKVPRKSD-FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLES 264 (423)
Q Consensus 188 ~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~-~~~~ 264 (423)
+..|++++.++.+.+ +.+|++++++.++ +++++|+ |+||||...+.+++.++|+. |+++|+|++|..+. +.+.
T Consensus 93 ~~~G~~~~~~~~~~~~~~~d~~~l~~~i~-~~~~~v~---~~~~~G~~~~~~~i~~la~~~~~~li~D~a~~~g~~~~~~ 168 (367)
T 3nyt_A 93 ALLGAKPVYVDIDPRTYNLDPQLLEAAIT-PRTKAII---PVSLYGQCADFDAINAIASKYGIPVIEDAAQSFGASYKGK 168 (367)
T ss_dssp HHTTCEEEEECBCTTTCSBCGGGTGGGCC-TTEEEEC---CBCGGGCCCCHHHHHHHHHHTTCCBEEECTTTTTCEETTE
T ss_pred HHcCCEEEEEecCCccCCcCHHHHHHhcC-cCCcEEE---eeCCccChhhHHHHHHHHHHcCCEEEEECccccCCeECCe
Confidence 999999999997644 8899999999996 6888888 88999999999999999987 99999999998543 2222
Q ss_pred hhhhhccCCcEEEEccC--hhhhcccCcccccccc-CHHHHHHHHHhcC--------------CCCCcHHHHHHHHHHhC
Q 014492 265 RMEWVKKHDNLIVLRTF--SKRAGLAGLRVGYGAF-PLSIIEYLWRAKQ--------------PYNVSVAAEVAACAALQ 327 (423)
Q Consensus 265 ~~~~~~~~~~~i~i~S~--SK~~g~~G~R~G~i~~-~~~~~~~l~~~~~--------------~~~~~~~~~~a~~~~l~ 327 (423)
..... + .+++.|| +|.+|.+|. .|+++. ++++.+++..... .+.++.+.+.++...++
T Consensus 169 ~~~~~---~-di~~~Sf~~~K~l~~~g~-gg~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~ 243 (367)
T 3nyt_A 169 RSCNL---S-TVACTSFFPSAPLGCYGD-GGAIFTNDDELATAIRQIARHGQDRRYHHIRVGVNSRLDTLQAAILLPKLE 243 (367)
T ss_dssp ETTSS---S-SEEEEECCTTSSSCCSSC-CEEEEESCHHHHHHHHHHTBTTEEETTEECSCCCBCCCCHHHHHHHHHHHH
T ss_pred eccCC---C-CEEEEECCCCCcCCCcCc-eeEEEeCCHHHHHHHHHHHhcCCCcCceeeccCcCCCccHHHHHHHHHHHH
Confidence 22111 1 4788887 899986576 788888 5778887776543 24567777766666664
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCC--c--eEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC-C-----
Q 014492 328 NPIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSY--S--NFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN-K----- 396 (423)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~--~--~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~-~----- 396 (423)
. +++..++.+++++++.+.|++++.... .+.. . .++.+.++ +.+++.+.|.++||.++.+.. +
T Consensus 244 ~---~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~L~~~GI~~~~~~~~~~~~~~ 317 (367)
T 3nyt_A 244 I---FEEEIALRQKVAAEYDLSLKQVGIGTPFIEVNNISVYAQYTVRMD---NRESVQASLKAAGVPTAVHYPIPLNKQP 317 (367)
T ss_dssp T---HHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTEECCCSSEEEECS---SHHHHHHHHHHHTCCCBCSCSSCGGGSG
T ss_pred H---HHHHHHHHHHHHHHHHHHhccCCeeccCCCCCCceeeEEEEEEeC---CHHHHHHHHHHCCCceeccCCCccccCh
Confidence 3 455666677778888888888753222 1221 1 12344443 688999999999999986532 0
Q ss_pred --C------------CCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492 397 --E------------LKGYVRVSVG---KPEHTDALMECLMHL 422 (423)
Q Consensus 397 --~------------~~~~iRis~~---~~~~~~~l~~al~~l 422 (423)
. ....+|+++. +.++++++.++++..
T Consensus 318 ~~~~~~~~~~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~~ 360 (367)
T 3nyt_A 318 AVADEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTNL 360 (367)
T ss_dssp GGCCTTCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC-
T ss_pred hhhccCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 0 0247899875 566777777777654
No 199
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.94 E-value=2e-26 Score=224.11 Aligned_cols=295 Identities=15% Similarity=0.155 Sum_probs=214.7
Q ss_pred CHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCeEEEcCCCchhhHHHH
Q 014492 110 PPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDA 187 (423)
Q Consensus 110 ~~~v~~al~~~-~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~ 187 (423)
++++.+++.+. .....+++++..++|+++++++|.+ ++++++|+++++..++.++ +++||+|+++.|+|..+...+
T Consensus 16 ~~~~~~a~~~~~~~~~~~~~~~~~~l~~~la~~~~~~--~~i~~~sgt~al~~~l~~l~~~~gd~Vi~~~~~~~~~~~~~ 93 (373)
T 3frk_A 16 EYEIKFKFEEIYKRNWFILGDEDKKFEQEFADYCNVN--YCIGCGNGLDALHLILKGYDIGFGDEVIVPSNTFIATALAV 93 (373)
T ss_dssp HHHHHHHHHHHHHHTCCSSSHHHHHHHHHHHHHHTSS--EEEEESCHHHHHHHHHHHTTCCTTCEEEEETTSCTHHHHHH
T ss_pred CHHHHHHHHHHHHCCCccCCchHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHH
Confidence 35667777653 2222235667899999999999964 8899999999999999999 899999999999999999999
Q ss_pred HHCCCeEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccC-CCc
Q 014492 188 AVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSG-LES 264 (423)
Q Consensus 188 ~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~-~~~ 264 (423)
+..|++++.++.+ +++.+|++++++.+. +++++|+ |+||||...+.+++.++|+. |+++|+|++|..+.. ...
T Consensus 94 ~~~g~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~---~~n~~G~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~ 169 (373)
T 3frk_A 94 SYTGAKPIFVEPDIRTYNIDPSLIESAIT-EKTKAII---AVHLYGQPADMDEIKRIAKKYNLKLIEDAAQAHGSLYKGM 169 (373)
T ss_dssp HHHSCEEEEECEETTTTEECGGGTGGGCC-TTEEEEE---EECCTTCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTE
T ss_pred HHcCCEEEEEeccccccCcCHHHHHHhcC-CCCeEEE---EECCCcCcccHHHHHHHHHHcCCEEEEECCcccCCEECCE
Confidence 9999999999965 567899999999997 5888888 78899999999999999998 999999999986432 222
Q ss_pred hhhhhccCCcEEEEccCh--hhhcccCccccccccC-HHHHHHHHHhcC--------------CCCCcHHHHHHHHHHhC
Q 014492 265 RMEWVKKHDNLIVLRTFS--KRAGLAGLRVGYGAFP-LSIIEYLWRAKQ--------------PYNVSVAAEVAACAALQ 327 (423)
Q Consensus 265 ~~~~~~~~~~~i~i~S~S--K~~g~~G~R~G~i~~~-~~~~~~l~~~~~--------------~~~~~~~~~~a~~~~l~ 327 (423)
..... ..+++.||+ |.++..| +.|+++.+ +++.+++..... .+.++.+...+....+
T Consensus 170 ~~~~~----~d~~~~S~~~~K~l~~~g-~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~~- 243 (373)
T 3frk_A 170 KVGSL----GDAAGFSFYPAKNLGSLG-DGGAVVTNDKDLAEKIKALSNYGSEKKYHHIYKGFNSRLDELQAGFLRVKL- 243 (373)
T ss_dssp ETTSS----SSEEEEECCTTSSSCCSS-SCEEEEESCHHHHHHHHHHHBTTCSBTTBCCSCCCBCCCCHHHHHHHHHHH-
T ss_pred ecccc----ccEEEEeCcCCCccCccc-eeEEEEeCCHHHHHHHHHHHhcCcccCCccccccccCCCCHHHHHHHHHHH-
Confidence 11111 137778877 8776324 37888875 557776665432 1234555554444433
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHccCCCCeec--CCCc--eE--EEEEeCCCCCHHHHHHHHHhCCcEEEeCCC-C----
Q 014492 328 NPIYLEKVKEALIKERERLFKLLKDVPFLNPY--PSYS--NF--ILCEVTSGMDAKKLKDDLAKMGVMIRHYNN-K---- 396 (423)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~--p~~~--~~--~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~-~---- 396 (423)
+.+++..++.+++.+++.+.|++++ +.+. +... .+ +.+.. .+.+++.+.|.++||.++.+.. +
T Consensus 244 --~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~L~~~gI~v~~~~~~~~~~~ 317 (373)
T 3frk_A 244 --KYLDKWNEERRKIAQKYIAGINNPN-VIIPVEADYAKHVWYTFVIRS---EKRDELQKYLNNNGIGTLIHYPIPIHLQ 317 (373)
T ss_dssp --HTHHHHHHHHHHHHHHHHHHCCCTT-EECCCCCTTEECCCSSEEEEE---SSHHHHHHHHHHTTBCCBCSCSSCGGGS
T ss_pred --HHHHHHHHHHHHHHHHHHHHhccCc-eEeccCCCCCceeeEEEEEEe---CCHHHHHHHHHHCCCCcccCcCCccccC
Confidence 3355677777888889999998887 4432 1212 22 22333 3688999999999999986541 0
Q ss_pred -----------CC-------CCeEEEEec---ChhhHHHHHHHHhhh
Q 014492 397 -----------EL-------KGYVRVSVG---KPEHTDALMECLMHL 422 (423)
Q Consensus 397 -----------~~-------~~~iRis~~---~~~~~~~l~~al~~l 422 (423)
.. .+.+||++. +.++++++.++|++.
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~~~~~l~~~ 364 (373)
T 3frk_A 318 QAYKDLGFKTGNFPIAEKIANEILSIPIWYGMKNEEIEYVIDKINAW 364 (373)
T ss_dssp GGGGGGCCCTTSSHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTC
T ss_pred hHHHhcCCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHH
Confidence 00 157999986 566777777777654
No 200
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.94 E-value=2.1e-25 Score=217.32 Aligned_cols=308 Identities=16% Similarity=0.099 Sum_probs=222.7
Q ss_pred CCCCCCCCCCHHHHHHHhcC-CCCCCCC-CcchHHHHHHH-HHHhCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCeEEEc
Q 014492 101 DANENPYGPPPEVREALGQL-KFPYIYP-DPESRRLRAAL-AKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDC 176 (423)
Q Consensus 101 ~~~~~~~~~~~~v~~al~~~-~~~~~Y~-~~g~~~lr~~i-a~~~g~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~ 176 (423)
..+++++++++++.+++.+. ..+..++ .+...+||+++ ++++| ..+++++++|+++++.+++.++ +++||+|+++
T Consensus 6 ~~~~p~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~l~~~~~a~~~g-~~~~~v~~~sgt~al~~al~~l~~~~Gd~Vi~~ 84 (377)
T 3ju7_A 6 PFLRASTVPVIEYLDELKEIDASHIYTNYGPINQRFEQTIMSGFFQ-NRGAVTTVANATLGLMAAIQLKKRKKGKYALMP 84 (377)
T ss_dssp CSCCCCCCCGGGGHHHHHHHHHHTCCSSSCHHHHHHHHHHHHHTST-TCSEEEEESCHHHHHHHHHHHHSCTTCCEEEEE
T ss_pred eccCCCCCCcHHHHHHHHHHHHcCCcccCCHHHHHHHHHHHHHHhC-CCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEEC
Confidence 34478898888888888763 2222223 45678999999 99999 3567888999999999999988 8999999999
Q ss_pred CCCchhhHHHHHHCCCeEEEecCC-CCCCCCHHHHHHHhhcCC--ceEEEEcCCCCCcCcCCCHHHHHHHHcCCCEEEEc
Q 014492 177 PPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREK--PKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLD 253 (423)
Q Consensus 177 ~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~--~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~li~D 253 (423)
.|+|..+...++..|++++.++.+ +++.+|++++++++..++ +|+|+ |+||+|.+.+.+++.++|+.|++||+|
T Consensus 85 ~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~tk~v~---~~~~~G~~~~~~~i~~la~~~~~vi~D 161 (377)
T 3ju7_A 85 SFTFPATPLAAIWCGLEPYFIDISIDDWYMDKTVLWDKIEELKEEVAIVV---PYATFGSWMNLEEYEELEKKGVPVVVD 161 (377)
T ss_dssp SSSCTHHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHHHHHGGGEEEEC---CBCGGGBCCCCHHHHHHHHTTCCBEEE
T ss_pred CCCcHHHHHHHHHcCCEEEEEecCCccCCcCHHHHHHHHhcCCCCceEEE---EECCCCCccCHHHHHHHHhcCCEEEEE
Confidence 999999999999999999999976 578999999999883345 88887 788999999999999999988999999
Q ss_pred cCCccccC-CCchh-hhhccCCcEEEEcc--ChhhhcccCcccccccc-CHHHHHHHHHhcC--------------CCCC
Q 014492 254 EAYTEFSG-LESRM-EWVKKHDNLIVLRT--FSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQ--------------PYNV 314 (423)
Q Consensus 254 eay~~~~~-~~~~~-~~~~~~~~~i~i~S--~SK~~g~~G~R~G~i~~-~~~~~~~l~~~~~--------------~~~~ 314 (423)
++|+.+.. .+... ... .+ +.+.| .+|.++. | +.|+++. ++++.+++...+. .+.+
T Consensus 162 ~a~a~g~~~~~~~~g~~~--~d--~~~~S~~~~K~l~~-g-~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~ 235 (377)
T 3ju7_A 162 AAPGFGLMNGGMHYGQDF--SG--MIIYSFHATKPFGI-G-EGGLIYSKNEEDIQRIKRMGNFGFDTNRECTMMGFNCKM 235 (377)
T ss_dssp CTTCTTCEETTEETTTTC--SS--EEEEECBTTSSSCC-B-SCEEEEESCHHHHHHHHHHTBTTBCTTSCBCSSCCBCCC
T ss_pred CCCccCCeECCEeccCCC--Cc--EEEEECCCCCcCCC-C-CcEEEEECCHHHHHHHHHHHhcCCCCCCceeeccccCCC
Confidence 99985432 11111 010 12 44445 4698874 5 5677776 5677777776543 2345
Q ss_pred cHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCe--ecCCCc-----eEEEEEeCCCCCHHHHHHHHHhCC
Q 014492 315 SVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLN--PYPSYS-----NFILCEVTSGMDAKKLKDDLAKMG 387 (423)
Q Consensus 315 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~--~~p~~~-----~~~~~~~~~~~~~~~l~~~L~~~g 387 (423)
+.+.+..+...+ +.++...++.+++++++.+.|++++.+. ..+..+ .|+.+.+++..+.+++.+.|.++|
T Consensus 236 ~~~~aa~~~~~l---~~l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 312 (377)
T 3ju7_A 236 SEYAAAIGIATM---KKWDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPILCPEEVRNKQVIEDLKKQK 312 (377)
T ss_dssp CHHHHHHHHHHH---HTHHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEEECCTTSCHHHHHHHHHTTT
T ss_pred CHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEEEEEeCChhhHHHHHHHHHHCC
Confidence 666655555555 3455666677778888888888776431 222221 245667765556899999999999
Q ss_pred cEEEeCCCC--------C-------------CCCeEEEEec---ChhhHHHHHHHHhh
Q 014492 388 VMIRHYNNK--------E-------------LKGYVRVSVG---KPEHTDALMECLMH 421 (423)
Q Consensus 388 I~v~~~~~~--------~-------------~~~~iRis~~---~~~~~~~l~~al~~ 421 (423)
|.++.+... . ..+.|||.+. +.++.+++.++|++
T Consensus 313 I~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~~~~~t~~di~~v~~~l~~ 370 (377)
T 3ju7_A 313 IEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPLWEGMTKEIVEQIVICLGQ 370 (377)
T ss_dssp BCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHTC
T ss_pred CceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCCCCCCCHHHHHHHHHHHHH
Confidence 999865410 0 0236899875 45566666666654
No 201
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.94 E-value=6.4e-26 Score=223.23 Aligned_cols=268 Identities=15% Similarity=0.101 Sum_probs=203.9
Q ss_pred HHHHHHHhcC---------CCCCCCCCcchHHHHHHHHHHhCCCCCcEEE--eCCHHHHHHHHHHHhcCCCCeEEEcC-C
Q 014492 111 PEVREALGQL---------KFPYIYPDPESRRLRAALAKDSGLESDHILV--GCGADELIDLIMRCVLDPGDKIVDCP-P 178 (423)
Q Consensus 111 ~~v~~al~~~---------~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~--t~G~~~al~~~~~~l~~~gd~Vl~~~-p 178 (423)
++|++++.+. ..++.|++.+..+|++.+|+++|.+.. +++ ++|+++++..++.++++|||+|+++. |
T Consensus 46 ~~Vl~A~~~~~~~~~~~~~~~gy~y~~~~~~~Le~~lA~l~g~e~a-lv~p~~~sGt~Ai~~al~all~pGD~Vl~~~~~ 124 (427)
T 3i16_A 46 LKVLNAFQEERISEAHFTNSSGYGYGDIGRDSLDAVYARVFNTESA-LVRPHFVNGTHALGAALFGNLRPGNTMLSVCGE 124 (427)
T ss_dssp HHHHHHHHHTTCCGGGSCCCCTTCTTCHHHHHHHHHHHHHHTCSEE-EEETTCCSHHHHHHHHHHHHCCTTCEEEESSSS
T ss_pred HHHHHHHHHhchhHHhcCCCCCCCCCHHHHHHHHHHHHHHhCCcce-EEeCCCccHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 5677777642 123567888888999999999997543 443 77888999999999999999999998 9
Q ss_pred CchhhHHH-----------HHHCCCeEEEecCCCCCCCCHHHHHHHhhc-CCceEEEEcC----CCCCcCcCCCHHHHHH
Q 014492 179 TFTMYEFD-----------AAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTS----PNNPDGSIINDEDLLK 242 (423)
Q Consensus 179 ~y~~~~~~-----------~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~~i~l~~----p~NPtG~~~~~~~l~~ 242 (423)
.|..+... ++..|++++.++.++++.+|++++++++++ +++|+|++++ |+||||.+.+.+++.+
T Consensus 125 ~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~~g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~dl~~i~~ 204 (427)
T 3i16_A 125 PYDTLHDVIGITENSNMGSLKEFGINYKQVDLKEDGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIEDIKSIVD 204 (427)
T ss_dssp CCGGGHHHHTCSCCCSSCCTGGGTCEEEECCCCTTSSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHHHHHHHHH
T ss_pred ccHHHHHHHhccccchHHHHHHcCCEEEEecCccCCCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHHHHHHHHH
Confidence 99877633 355799999999877778999999999974 5899999998 9999999999999999
Q ss_pred HHcC---CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccC-ccccccccCHHHHHHHHHhcCC--CC--C
Q 014492 243 ILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRAKQP--YN--V 314 (423)
Q Consensus 243 i~~~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~~~~~--~~--~ 314 (423)
+|+. |+++++|++|..+.....+.. .+.+++++|+||.+|.+| .+.||+++++++++++...... .+ .
T Consensus 205 la~~~~~g~~livD~a~~~~~~~~~p~~----~gaDiv~~S~sK~lgg~g~~~gG~i~~~~~li~~l~~~~~~~~~g~~~ 280 (427)
T 3i16_A 205 CVKNIRKDIICFVDNCYGEFMDTKEPTD----VGADLIAGSLIKNIGGGIAPTGGYLAGTKDCIEKTSYRLTVPGIGGEC 280 (427)
T ss_dssp HHHHHCTTSEEEEECTTTTTSSSSCGGG----GTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTTTGGGC
T ss_pred HHHHhCCCCEEEEECCCccccccCCccc----cCCeEEEecCcccCCCCCCceEEEEEECHHHHHHHHHhcccCccCccC
Confidence 9975 999999999998764333222 234589999999998655 6679999999999999874332 21 1
Q ss_pred cH-HHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCce-----EEEEEeCCCCCHHHHHHHHHhC
Q 014492 315 SV-AAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSN-----FILCEVTSGMDAKKLKDDLAKM 386 (423)
Q Consensus 315 ~~-~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~-----~~~~~~~~~~~~~~l~~~L~~~ 386 (423)
++ .. ++..+++....+..+.++..+++.++.+.|+++++ .++|+.+. .+.+.+.+......|++.|...
T Consensus 281 ~~~~~--~a~~~l~gl~~~~~r~~~~~~~a~~la~~L~~~g~-~V~p~~~~~~~~~i~~i~l~~~~~~~~f~~~l~~~ 355 (427)
T 3i16_A 281 GSTFG--VVRSMYQGLFLAPHISMEALKGAILCSRIMELAGF-EVMPKYDEKRSDIIQSIKFNDKDKLIEFCKGIQTG 355 (427)
T ss_dssp CCCTT--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-EEESCTTSCCSSSCEEEECSSHHHHHHHHHHHHHT
T ss_pred CccHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-eecCCCCCCCccEEEEEEECCHHHHHHHHHHHhhc
Confidence 11 11 12223333344567788888999999999999986 55666554 7778886444466788888755
No 202
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.94 E-value=1.5e-25 Score=220.67 Aligned_cols=281 Identities=10% Similarity=0.051 Sum_probs=200.3
Q ss_pred CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHH----HHCCCeEEEecCC
Q 014492 125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPRK 200 (423)
Q Consensus 125 ~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~~ 200 (423)
+|+++...++|+.+|+++|.+ ++++++|++++++.++.+++++||+|+++.|.|......+ +..|+++..++.+
T Consensus 78 r~~~p~~~~le~~lA~l~g~~--~~i~~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~ 155 (415)
T 2fq6_A 78 RRGTLTHFSLQQAMCELEGGA--GCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPL 155 (415)
T ss_dssp TTCCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECTT
T ss_pred CCCCchHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEECCC
Confidence 345666789999999999964 5667788899999999999999999999999998666443 3479999999742
Q ss_pred CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC---CCEEEEccCCccccCCCchhhhhccCCcEEE
Q 014492 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIV 277 (423)
Q Consensus 201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~ 277 (423)
|+++++++++ +++++|++++|+||||.+++.+++.++|+. |+++|+|++|..+... .+. ..+.+++
T Consensus 156 -----d~~~le~ai~-~~tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a~a~~~~~-~p~----~~g~Div 224 (415)
T 2fq6_A 156 -----IGADIVKHLQ-PNTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLF-KAL----DFGIDVS 224 (415)
T ss_dssp -----CGGGGGGGCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTTTTTTSS-CGG----GGTCSEE
T ss_pred -----CHHHHHHhhc-cCCcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECCCcccccC-Ccc----ccCCeEE
Confidence 7899999997 689999999999999999999999999975 8999999999865332 122 2345689
Q ss_pred EccChhhhcccCcc-ccccccCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC
Q 014492 278 LRTFSKRAGLAGLR-VGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP 354 (423)
Q Consensus 278 i~S~SK~~g~~G~R-~G~i~~~~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 354 (423)
+.|++|.+|.+|.+ .||+++++++++.+..... ....++.....+...+ +++....++..++.+.+.+.|++.+
T Consensus 225 ~~S~sK~lg~~g~~~~G~l~~~~~~~~~l~~~~~~~G~~~~~~~a~~~~~~l---~~l~~r~~~~~~n~~~l~~~L~~~~ 301 (415)
T 2fq6_A 225 IQAATKYLVGHSDAMIGTAVCNARCWEQLRENAYLMGQMVDADTAYITSRGL---RTLGVRLRQHHESSLKVAEWLAEHP 301 (415)
T ss_dssp EEETTTTTTCSSSCCCEEEEECTTTHHHHHHHHHHTTCCCCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred EEeCccccCCCCCceEEEEEeCHHHHHHHHHHHHhcCCCCCHHHHHHHHhhh---hHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999988765 5899998888777765443 2234555444443433 4556666777788888888888765
Q ss_pred CCe-e-cC----------------CCceEEEEEeCCC---CCHHHHHHHHHhCCcEEEeCCC------------------
Q 014492 355 FLN-P-YP----------------SYSNFILCEVTSG---MDAKKLKDDLAKMGVMIRHYNN------------------ 395 (423)
Q Consensus 355 ~~~-~-~p----------------~~~~~~~~~~~~~---~~~~~l~~~L~~~gI~v~~~~~------------------ 395 (423)
.+. + +| ..+..+++.++++ .+...+.+.|...++.++.|+.
T Consensus 302 ~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g~~~~~~~~~~l~~l~~~~~a~s~G~~~s~~~~~~p~~~s~~~~~ 381 (415)
T 2fq6_A 302 QVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLNNEELANYLDNFSLFSMAYSWGGYESLILANQPEHIAAIRPQ 381 (415)
T ss_dssp TEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCCCHHHHHHHHTTCSSCEECSCCCSSSCEEEEECHHHHHTTCTT
T ss_pred CeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCCCCHHHHHHHHHhCCcCeEeccCCCCceeEEecCCCccccccch
Confidence 432 1 22 2467888999743 2333444443323333332211
Q ss_pred ---CCCCCeEEEEecChh---hHHHHHHHHhh
Q 014492 396 ---KELKGYVRVSVGKPE---HTDALMECLMH 421 (423)
Q Consensus 396 ---~~~~~~iRis~~~~~---~~~~l~~al~~ 421 (423)
...++.||||++.++ +.++|.++|+.
T Consensus 382 ~~~g~~~~~iRlS~G~e~~~d~i~~l~~al~~ 413 (415)
T 2fq6_A 382 GEIDFSGTLIRLHIGLEDVDDLIADLDAGFAR 413 (415)
T ss_dssp CCCCCCSCEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred hhcCCCCCEEEEEecCCCHHHHHHHHHHHHHh
Confidence 112479999998644 34455555554
No 203
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.94 E-value=7.7e-26 Score=221.87 Aligned_cols=267 Identities=15% Similarity=0.153 Sum_probs=201.8
Q ss_pred HHHHHHHhcCC---------CCCCCCCcchHHHHHHHHHHhCCCCCcEEE--eCCHHHHHHHHHHHhcCCCCeEEEcC-C
Q 014492 111 PEVREALGQLK---------FPYIYPDPESRRLRAALAKDSGLESDHILV--GCGADELIDLIMRCVLDPGDKIVDCP-P 178 (423)
Q Consensus 111 ~~v~~al~~~~---------~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~--t~G~~~al~~~~~~l~~~gd~Vl~~~-p 178 (423)
.++++++.+.. .++.|++.+..+|++.+|+++|.+. .+++ ++|+++++..++.+++++||+|+++. |
T Consensus 32 ~~vl~a~~~~~~~~~~~~~~~~~~y~~~~~~~Le~~lA~l~g~e~-alv~p~~~sGt~Ai~~al~all~~GD~Vl~~~~~ 110 (409)
T 3jzl_A 32 AKVLDAFQENKVSDFHFHPSTGYGYDDEGRDTLERVYATVFKTEA-ALVRPQIISGTHAISTVLFGILRPDDELLYITGQ 110 (409)
T ss_dssp HHHHHHHHHTTCCGGGGCCCCTTCTTCHHHHHHHHHHHHHHTCSE-EEEETTSCSHHHHHHHHHHHHCCTTCEEEECSSS
T ss_pred HHHHHHHHHhhhhhhccCCCcCCCCChhHHHHHHHHHHHHhCCCc-EEEECCCccHHHHHHHHHHHhcCCCCEEEEeCCC
Confidence 45666665421 1356788888899999999999643 3333 78889999999999999999999998 9
Q ss_pred CchhhHHH----------HHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcC----CCCCcCcCCCHHHHHHHH
Q 014492 179 TFTMYEFD----------AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTS----PNNPDGSIINDEDLLKIL 244 (423)
Q Consensus 179 ~y~~~~~~----------~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~----p~NPtG~~~~~~~l~~i~ 244 (423)
.|..+... ++..|++++.++.++++.+|+++++++++ +++++|++++ |+||||.+.+++++.+++
T Consensus 111 ~y~~~~~~~~~~g~~~~~l~~~G~~~~~v~~~~~g~~d~e~l~~ai~-~~tklV~i~~s~g~p~nptg~v~~l~~I~~la 189 (409)
T 3jzl_A 111 PYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLLENGDVDFPRIAKKMT-PKTKMIGIQRSRGYADRPSFTIEKIKEMIVFV 189 (409)
T ss_dssp CCTTHHHHHTSSSSSSSCTGGGTCEEEECCCCTTSCCCHHHHHHHCC-TTEEEEEEECSCTTSSSCCCCHHHHHHHHHHH
T ss_pred CcHhHHHHHhcccchhhHHHHcCCEEEEeCCCCCCCcCHHHHHHhcc-CCCeEEEEECCCCCCCCCcCccccHHHHHHHH
Confidence 99887743 35679999999987778899999999997 6899999999 999999999999999999
Q ss_pred cC---CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccC-ccccccccCHHHHHHHHHhcCC--C----CC
Q 014492 245 EM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRAKQP--Y----NV 314 (423)
Q Consensus 245 ~~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~~~~~--~----~~ 314 (423)
+. |+++++|++|..+........ .+.+++++|+||.+|.+| .+.||+++++++++++...... + +.
T Consensus 190 ~~~~~~~~livD~a~~~~~~~~~p~~----~g~Div~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~~g~ 265 (409)
T 3jzl_A 190 KNINPEVIVFVDNCYGEFVEYQEPPE----VGADIIAGSLIKNPGGGLAKTGGYIAGKEALVDLCGYRLTTPGIGREAGA 265 (409)
T ss_dssp HHHCTTCEEEEECTTCTTTSSCCSGG----GTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTTGGGCCC
T ss_pred HhhCCCCEEEEeCCcccccccCCccc----cCCeEEEECccccCCccCCceEEEEEeCHHHHHHHHHHhccccccccccc
Confidence 75 999999999998764222221 234589999999998655 3469999999999998874332 1 11
Q ss_pred cHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCce-----EEEEEeCCCCCHHHHHHHHHhCC
Q 014492 315 SVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSN-----FILCEVTSGMDAKKLKDDLAKMG 387 (423)
Q Consensus 315 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~-----~~~~~~~~~~~~~~l~~~L~~~g 387 (423)
......++...+ .....++++..+++.++.+.|+++++ .+.|+.+. .+.+.+.+......+++.|.+..
T Consensus 266 ~~~~~~~~l~gl---~~~~~r~~~~~~~a~~la~~L~~~g~-~v~p~~~~~~~~~i~~i~l~~~~~~~~~~~~L~~~~ 339 (409)
T 3jzl_A 266 SLYSLLEMYQGF---FLAPHVTAQAIKGARFTAAMLAEFGV-EADPVWDAPRTDLIQSVSFHNKEKMVAFAQAIQAAS 339 (409)
T ss_dssp CTTCHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHTTC-EEESCTTSCCSSSCCEEECSCHHHHHHHHHHHHHTS
T ss_pred cHHHHHHHHHHH---hhHHHHHHHHHHHHHHHHHHHHhCCC-cccCCCCCCCccEEEEEEeCCHHHHHHHHHHHHhcC
Confidence 111122233333 34566777788899999999999886 54555443 66777764455667888888654
No 204
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.93 E-value=9.4e-25 Score=218.19 Aligned_cols=283 Identities=13% Similarity=0.056 Sum_probs=205.5
Q ss_pred HHHHHHHHHHhCCCCCcEEEeCCHHH-HHHHHHHHhcC--CCCeEEEcCCCchhhHHHHHHCCCeEEEecC---CCCCCC
Q 014492 132 RRLRAALAKDSGLESDHILVGCGADE-LIDLIMRCVLD--PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR---KSDFSL 205 (423)
Q Consensus 132 ~~lr~~ia~~~g~~~~~i~~t~G~~~-al~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~---~~~~~~ 205 (423)
.++++.+++++|++++ +++|+|+++ ++..++.++.. +|+.|+++.+.|..+...++..|++++.++. ++++.+
T Consensus 136 ~~~~~~la~~~g~~~~-~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~~ 214 (456)
T 2z67_A 136 NKILESFFKQLGLNVH-AIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVETVLDGDRVYV 214 (456)
T ss_dssp HHHHHHHHHHTTCCCE-EEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEETTEEEC
T ss_pred HHHHHHHHHHcCCCCC-EEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHHHcCCCceEEEEeccCCCCCc
Confidence 4588999999999776 999999994 55445554433 6788999999999999999999999999986 567789
Q ss_pred CHHHHHHHh-hc---CCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCc--hhhhhccCCcEEEE
Q 014492 206 NVELIADAV-ER---EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVL 278 (423)
Q Consensus 206 d~~~l~~~i-~~---~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~i 278 (423)
|++++++++ +. .++.+|++++||||||.+.+.++|.++|+. |+++++|++|..+..+.. ....+.. ...+++
T Consensus 215 d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~~~~~~-~~D~~~ 293 (456)
T 2z67_A 215 PVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKY-RVDAVV 293 (456)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTS-CCSEEE
T ss_pred CHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHHhhHHHHHhhCC-CCCEEE
Confidence 999999999 42 477888889999999999999999999998 999999999986653211 1111111 333678
Q ss_pred ccChhhhcccCcccccccc-CHHHHHHHHHhcCCCC--CcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC-
Q 014492 279 RTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQPYN--VSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP- 354 (423)
Q Consensus 279 ~S~SK~~g~~G~R~G~i~~-~~~~~~~l~~~~~~~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~- 354 (423)
.|++|.+ .++.++||+++ ++++++.+......+. .+.+++.++...+. .+++++..++..++++++.+.|++++
T Consensus 294 ~s~hK~~-~~p~g~G~l~~~~~~~~~~l~~~~~g~~~~~~~~~~~aal~~l~-~~~~~~~~~~~~~~~~~l~~~L~~~~~ 371 (456)
T 2z67_A 294 SSSDKNL-LTPIGGGLVYSTDAEFIKEISLSYPGRASATPVVNTLVSLLSMG-SKNYLELVKNQKNSKKLLDELLNDLSK 371 (456)
T ss_dssp EEHHHHH-CCCSSCEEEEESCHHHHHHHHTTSCSCBCSHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EcCCCCc-CCCCCeEEEEEcCHHHHhhcCcCCCCCCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 8999955 46789999999 6788877743322222 12334444444443 35678889999999999999998873
Q ss_pred --CCeecCCCceEEEEEe--CCCCCHHHHHHHHHhCCc---EEE------eCCC--CCCCCeEEEEec---ChhhHHHHH
Q 014492 355 --FLNPYPSYSNFILCEV--TSGMDAKKLKDDLAKMGV---MIR------HYNN--KELKGYVRVSVG---KPEHTDALM 416 (423)
Q Consensus 355 --~~~~~p~~~~~~~~~~--~~~~~~~~l~~~L~~~gI---~v~------~~~~--~~~~~~iRis~~---~~~~~~~l~ 416 (423)
+..+.+.. +++++.+ ++ . ..++.+.|.++|| .+. .+.. ....+++|++++ +.++++++.
T Consensus 372 ~~g~~v~~~~-~~v~~~~~~~~-~-~~~l~~~L~~~gi~~~rv~~~~g~f~G~~~~~~~~~~vr~s~~~~~t~eeid~~l 448 (456)
T 2z67_A 372 KTGGKFLDVE-SPIASCISVNS-D-PVEIAAKLYNLRVTGPRGIKKTDHFGNCYLGTYTHDYIVMNAAIGVRTEDIVNSV 448 (456)
T ss_dssp HSSCCBCCCC-CSSEEEEECSS-C-HHHHHHHHHHTTEESCEEECTTCHHHHTCSSCCSCCEEEEECCTTCCHHHHHHHH
T ss_pred ccCCEecCCC-CeEEEEEeccc-H-HHHHHHHHHHcCCCcceEEeecCccccccccccCcchhhhhhhcCCCHHHHHHHH
Confidence 35554444 7777777 42 1 5788999998875 443 1111 122479999976 566667777
Q ss_pred HHHhh
Q 014492 417 ECLMH 421 (423)
Q Consensus 417 ~al~~ 421 (423)
++|++
T Consensus 449 ~~L~~ 453 (456)
T 2z67_A 449 SKLEK 453 (456)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 77665
No 205
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.93 E-value=1.3e-24 Score=213.29 Aligned_cols=279 Identities=15% Similarity=0.104 Sum_probs=200.0
Q ss_pred CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHH-----HHHCCCeEEEec
Q 014492 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD-----AAVNGAAVVKVP 198 (423)
Q Consensus 124 ~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~-----~~~~g~~~~~v~ 198 (423)
.+|+++...+|++.+++++|.+ +.++++++++++..+ ..++++||+|+++.|+|...... ++..|++++.++
T Consensus 62 ~r~~~p~~~~l~~~la~l~g~~--~~~~~~sG~~Ai~~~-~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~ 138 (400)
T 3nmy_A 62 SRTHNPTRFAYERCVAALEGGT--RAFAFASGMAATSTV-MELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVD 138 (400)
T ss_dssp TTTCCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHH-HTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEEC
T ss_pred ccCCCHHHHHHHHHHHHHhCCC--CEEEecCHHHHHHHH-HHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEEC
Confidence 3456777889999999999864 566666679999884 56889999999999999844433 334699999998
Q ss_pred CCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEE
Q 014492 199 RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIV 277 (423)
Q Consensus 199 ~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~ 277 (423)
.+ |+++++++++ +++++|++++|+||||.+++.+++.++|+. |+++|+||+|..+.... .. ..+.+++
T Consensus 139 ~~-----d~~~l~~~i~-~~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~~~~~~~~-~~----~~g~div 207 (400)
T 3nmy_A 139 LT-----DPAAFKAAIR-ADTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTFASPMLQR-PL----SLGADLV 207 (400)
T ss_dssp TT-----SHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCC-GG----GGTCSEE
T ss_pred CC-----CHHHHHHHhc-cCCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccCC-hh----hcCCcEE
Confidence 53 7999999997 689999999999999999999999999987 99999999998433211 11 1245589
Q ss_pred EccChhhhcccCccccc--cc-cCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc
Q 014492 278 LRTFSKRAGLAGLRVGY--GA-FPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKD 352 (423)
Q Consensus 278 i~S~SK~~g~~G~R~G~--i~-~~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~ 352 (423)
+.|+||.++.+|.++|. ++ .++++++++...... ...++..+.++...++. +....++..++.+++.+.|++
T Consensus 208 ~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~~l~~l~~---l~~r~~~~~~~a~~l~~~L~~ 284 (400)
T 3nmy_A 208 VHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQNSIGGVQGPFDSFLALRGLKT---LPLRMRAHCENALALAQWLET 284 (400)
T ss_dssp EEETTTTTTCSSSCCCEEEEECSCHHHHHHHHHHHHHHCCBCCHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHTT
T ss_pred EecCccccCCCCCcceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhHhH---HHHHHHHHHHHHHHHHHHHHc
Confidence 99999999878878755 33 477888877655432 45677777666666644 455667778888999999988
Q ss_pred CCCCe-e-cC----------------CCceEEEEEeCCC-CCHHHHHHHHHhCCcEEEeCCC------------------
Q 014492 353 VPFLN-P-YP----------------SYSNFILCEVTSG-MDAKKLKDDLAKMGVMIRHYNN------------------ 395 (423)
Q Consensus 353 ~~~~~-~-~p----------------~~~~~~~~~~~~~-~~~~~l~~~L~~~gI~v~~~~~------------------ 395 (423)
.+.+. + +| +.|.+++++++.+ .....+.+.|.-.++.+..|+.
T Consensus 285 ~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~ 364 (400)
T 3nmy_A 285 HPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGGFDAAKRFCEKTELFTLAESLGGVESLVNHPAVMTHASIPVA 364 (400)
T ss_dssp CTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHHHHHHHHHHHCSSSEECSCCCSSSCEEECTTTTTTTTSCHH
T ss_pred CCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCcHHHHHHHHHcCCcceEecCCCCCcceeeCccccccccCCHH
Confidence 76543 2 23 2467899999632 1234455554433333332221
Q ss_pred -----CCCCCeEEEEecChhhHHHHHHHHh
Q 014492 396 -----KELKGYVRVSVGKPEHTDALMECLM 420 (423)
Q Consensus 396 -----~~~~~~iRis~~~~~~~~~l~~al~ 420 (423)
.-.++.+|||++.++. +++.+.|+
T Consensus 365 ~~~~~gi~~~liRlsvGle~~-~dli~dl~ 393 (400)
T 3nmy_A 365 RREQLGISDALVRLSVGIEDL-GDLRGDLE 393 (400)
T ss_dssp HHHHHTCCTTEEEEECCSSCH-HHHHHHHH
T ss_pred HHHhcCCCcCeEEEEeCcCCH-HHHHHHHH
Confidence 0135789999997653 55555444
No 206
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.93 E-value=3.3e-25 Score=218.16 Aligned_cols=265 Identities=14% Similarity=0.119 Sum_probs=200.3
Q ss_pred HHHHHHHhcC---------CCCCCCCCcchHHHHHHHHHHhCCCCCcEEE---eCCHHHHHHHHHHHhcCCCCeEEEcC-
Q 014492 111 PEVREALGQL---------KFPYIYPDPESRRLRAALAKDSGLESDHILV---GCGADELIDLIMRCVLDPGDKIVDCP- 177 (423)
Q Consensus 111 ~~v~~al~~~---------~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~---t~G~~~al~~~~~~l~~~gd~Vl~~~- 177 (423)
+.|++++.+. ..++.|++.+..+|++.+++++|.+. .++ ++|+++++..++.++++|||+|++.+
T Consensus 47 ~~Vl~a~~~~~~~~~~~~~~~gy~Y~~~g~~~Le~~lA~l~g~e~--alv~p~~~sGt~A~~~al~all~pGD~Vl~~~~ 124 (427)
T 3hvy_A 47 LKVLKAFQEERISESHFTNSSGYGYNDIGRDSLDRVYANIFNTES--AFVRPHFVNGTHAIGAALFGNLRPNDTMMSICG 124 (427)
T ss_dssp HHHHHHHHHTTCCGGGSCCCCTTCTTCHHHHHHHHHHHHHHTCSE--EEEETTCCSHHHHHHHHHHHTCCTTCEEEECSS
T ss_pred HHHHHHHHHHHHHHHhcccCcCCCCCchhHHHHHHHHHHHhCCCc--eEEeCCCCcHHHHHHHHHHHhcCCCCEEEEeCC
Confidence 6777887653 12356778888899999999999643 344 77888999999999999999999998
Q ss_pred CCchhhHH-----------HHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-CCceEEEEcC----CCCCcCcCCCHHHHH
Q 014492 178 PTFTMYEF-----------DAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTS----PNNPDGSIINDEDLL 241 (423)
Q Consensus 178 p~y~~~~~-----------~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~~i~l~~----p~NPtG~~~~~~~l~ 241 (423)
|.|..+.. .++..|++++.++. +++.+|++++++++++ +++|+|++++ |+||||.+.+.+++.
T Consensus 125 ~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~-~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v~dl~~i~ 203 (427)
T 3hvy_A 125 MPYDTLHDIIGMDDSKKVGSLREYGVKYKMVDL-KDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIAEIAEII 203 (427)
T ss_dssp SCCGGGHHHHTCCTTCCSCCTGGGTCEEEECCC-BTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCHHHHHHHH
T ss_pred CCchhHHHHhccccchhhhHHHHcCCEEEEecC-CCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccccHHHHHHHH
Confidence 99987763 34557999999998 6678999999999974 6899999998 999999999999999
Q ss_pred HHHcC---CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccC-ccccccccCHHHHHHHHHhcCC--CC--
Q 014492 242 KILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRAKQP--YN-- 313 (423)
Q Consensus 242 ~i~~~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~~~~~--~~-- 313 (423)
++|+. |+++++|++|..+.....+.. .+.+++++|+||.+|..| .+.||+++++++++++...... ..
T Consensus 204 ~ia~~~~~g~~livD~a~~~~~~~~~p~~----~gaDiv~~S~sK~lgg~g~~~GG~i~~~~~li~~l~~~~~~~~~g~~ 279 (427)
T 3hvy_A 204 KSIREVNENVIVFVDNCYGEFVEEKEPTD----VGADIIAGSLIKNIGGGIATTGGYIAGKEEYVTQATFRVTVPGIGGE 279 (427)
T ss_dssp HHHHHHCSSSEEEEECTTCTTTSSSCGGG----GTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTTTGGG
T ss_pred HHHHHhCCCCEEEEECCccccccCCCCcc----cCCeEEEECCcccccccccceEEEEEECHHHHHHHHHHhhcCCcccc
Confidence 99986 999999999998764333322 234589999999988544 5569999999999999875422 11
Q ss_pred CcH-HH-HHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCce-----EEEEEeCCCCCHHHHHHHHHhC
Q 014492 314 VSV-AA-EVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSN-----FILCEVTSGMDAKKLKDDLAKM 386 (423)
Q Consensus 314 ~~~-~~-~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~-----~~~~~~~~~~~~~~l~~~L~~~ 386 (423)
..+ +. ...+...+ .....+.++..+++.++.+.|+++++ .+.|+.+. .+.+.+.+......+++.|...
T Consensus 280 ~~~~~~~a~~~~~gl---~~~~~r~~~~~~~a~~la~~L~~~g~-~V~p~~~~~~~~li~~~~l~~~~~~~~f~~~l~~~ 355 (427)
T 3hvy_A 280 CGSTFGVMRSLYEGL---FMAPHVTIEAVKGAVFCARIMELAGF-DVLPKYNDKRTDIIQAIKFNDEKKLIDFIKGIQTA 355 (427)
T ss_dssp CCCCTTCHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHTTC-EEESCTTSCCSSSEEEEECSSHHHHHHHHHHHHHT
T ss_pred cCCCHHHHHHHHHhH---hHHHHHHHHHHHHHHHHHHHHHhCCC-eecCCCCCCCceEEEEEeCCCHHHHHHHHHHhccc
Confidence 111 11 22222222 34556777888899999999999886 55665444 6778885434456777888754
No 207
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.93 E-value=1.3e-25 Score=223.55 Aligned_cols=277 Identities=13% Similarity=-0.005 Sum_probs=193.2
Q ss_pred CCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC--CCC-
Q 014492 126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSD- 202 (423)
Q Consensus 126 Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~- 202 (423)
+++....++++.+++ +|.+ +++++|+|+++++..++.+++++||+|+++.|+|..+...+...|++++.++. +++
T Consensus 54 ~~~~~~~~~~~~la~-~g~~-~~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~ 131 (446)
T 2x3l_A 54 HPEEVILKSMKQVEK-HSDY-DGYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHALDISQQEGHFIETHQSPLT 131 (446)
T ss_dssp SCSSHHHHHHHHHCS-CTTE-EEEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHHHHHHTCCEEECEEEECTTT
T ss_pred CcchHHHHHHHHHHh-cCCC-ceEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHHHHHcCCeEEEEeCeecccc
Confidence 355567899999999 9976 78999999999999999999999999999999999999999999999999986 554
Q ss_pred ---CCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCcc-ccCCCchhhhhccCCcEEE
Q 014492 203 ---FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTE-FSGLESRMEWVKKHDNLIV 277 (423)
Q Consensus 203 ---~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~-~~~~~~~~~~~~~~~~~i~ 277 (423)
+.+|++++ +. .++++|++++ .|+||.+++.+++.++|+. |+++|+||+|.. +.+.+...... ..+..++
T Consensus 132 ~~~~~~d~~~l---~~-~~~~~v~~~~-~n~~G~~~~l~~I~~l~~~~~~~livDea~~~~~~f~~~~~~~~-~~g~Di~ 205 (446)
T 2x3l_A 132 NHYNKVNLSRL---NN-DGHKLVVLTY-PNYYGETFNVEEVIKSLHQLNIPVLIDEAHGAHFGLQGFPDSTL-NYQADYV 205 (446)
T ss_dssp SSEEEEEC-----------CCEEEEES-SCTTSCCCCHHHHHHHHHHTTCCEEEECTTCTTTTSTTSCCCGG-GGTCSEE
T ss_pred CcCCCCCHHHH---cC-CCceEEEEEC-CCCCeEecCHHHHHHHHHhcCCeEEEcchhhhhhccCCCCCChH-HcCCCEE
Confidence 46788887 33 6799999999 4559999999999999987 999999999986 22222111111 1123489
Q ss_pred EccChhhhcccCccccccccCHHHHH--HHHH---hcCCCCCcHHHHHHHHHHhCChHH--HHHHHHHHHHHHHHHHHHH
Q 014492 278 LRTFSKRAGLAGLRVGYGAFPLSIIE--YLWR---AKQPYNVSVAAEVAACAALQNPIY--LEKVKEALIKERERLFKLL 350 (423)
Q Consensus 278 i~S~SK~~g~~G~R~G~i~~~~~~~~--~l~~---~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~L 350 (423)
+.|+||.++ ++.++||++++++.++ .+.. .....+.+.....++..+++..+. .++..++.+++++++.+.
T Consensus 206 ~~S~~K~l~-~~~g~g~l~~~~~~i~~~~~~~~~~~~~~~s~~~~~~aal~~a~~~l~~~g~~~~~~~~~~l~~~l~~~- 283 (446)
T 2x3l_A 206 VQSFHKTLP-ALTMGSVLYIHKNAPYRENIIEYLSYFQTSSPSYLIMASLESAAQFYKTYDSTLFFAKRAQLIECLENK- 283 (446)
T ss_dssp EECHHHHSS-SCTTCEEEEEETTCTTHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH-
T ss_pred EECCccccc-cccccEEEEEcCCcCCHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHc-
Confidence 999999643 3445899998766543 3322 123345555544444333321110 112455555555666555
Q ss_pred ccCCCCee-cCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492 351 KDVPFLNP-YPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL 422 (423)
Q Consensus 351 ~~~~~~~~-~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l 422 (423)
+ +.+ .+..++++|+.++ +.+..++.+.|.++||.++..+ .+++|++++ +.++. ++.++|+++
T Consensus 284 ---g-~~~~~~~~~~~l~i~~~-~~~~~~l~~~L~~~GI~v~~~g----~~~iRi~~~~~~t~e~i-~l~~aL~~~ 349 (446)
T 2x3l_A 284 ---G-FEMLQVDDPLKLLIKYE-GFTGHDIQNWFMNAHIYLELAD----DYQALAILPLWHHDDTY-LFDSLLRKI 349 (446)
T ss_dssp ---T-CEEEECSSTTEEEEECT-TSCHHHHHHHHHHTTEEESEEC----SSCEEEECCCCCTTCCC-CHHHHHHHH
T ss_pred ---C-CEECcCCCCeEEEEEeC-CcCHHHHHHHHHHCCCEEEecC----CCEEEEEeecCCCHHHH-HHHHHHHHH
Confidence 2 333 2344568999987 7788999999998899997322 378999987 45556 666666553
No 208
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.93 E-value=5.3e-25 Score=218.91 Aligned_cols=309 Identities=17% Similarity=0.154 Sum_probs=206.8
Q ss_pred eEcCCCCCCCCCCHHHHHHHhc--C-CCCCCCC---Ccc----hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHH-h
Q 014492 98 VKIDANENPYGPPPEVREALGQ--L-KFPYIYP---DPE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRC-V 166 (423)
Q Consensus 98 i~l~~~~~~~~~~~~v~~al~~--~-~~~~~Y~---~~g----~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~-l 166 (423)
..++.+..+...|+.+.+.+.+ . .....|. ..| ..++++.+++++|.+++++++++|++.+.+.+..+ .
T Consensus 67 ~~~~~g~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~i~~~~g~taa~ea~~~a~~ 146 (438)
T 1wyu_A 67 AFLGGGVRSHHVPPVVQALAARGEFLTAYTPYQPEVSQGVLQATFEYQTMIAELAGLEIANASMYDGATALAEGVLLALR 146 (438)
T ss_dssp CCCCSSCCCCCCCHHHHHHHTSHHHHHCCSCCSGGGCHHHHHHHHHHHHHHHHHHTSSEECSCBSSHHHHHHHHHHHHHH
T ss_pred cccCCCccCCcCcHHHHHHHhcchhhhcCCCCcchhhhhHHHHHHHHHHHHHHHhCCCccceEEeCcHHHHHHHHHHHHh
Confidence 3556666666667766555422 1 1112231 122 45899999999999888899999999443333322 2
Q ss_pred cCCCCeEEEcCCCchhhHHHH----HHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHH
Q 014492 167 LDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK 242 (423)
Q Consensus 167 ~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~ 242 (423)
+++||+|+++.++|+.+...+ +..|++++.++. +++.+|+++ ++ +++++|++++| ||||.+.+.+++.+
T Consensus 147 ~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~-~~~~~d~~~----i~-~~t~~v~i~~p-n~tG~~~~l~~i~~ 219 (438)
T 1wyu_A 147 ETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPL-EGGRTPLPE----VG-EEVGAVVVQNP-NFLGALEDLGPFAE 219 (438)
T ss_dssp HHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECC-BTTBCCCCC----CC-TTEEEEEEESS-CTTSBCCCHHHHHH
T ss_pred cCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcC-cCCccCHHH----hC-CCeEEEEEECC-CCCeEEecHHHHHH
Confidence 478999999999999887554 458999999997 445777766 54 68999999999 99999999999999
Q ss_pred HHcC-CCEEEEccC---CccccCCCchhhhhccCCcEEEEccChhhhc----ccCccccccccCHHHHHHHH--------
Q 014492 243 ILEM-PILVVLDEA---YTEFSGLESRMEWVKKHDNLIVLRTFSKRAG----LAGLRVGYGAFPLSIIEYLW-------- 306 (423)
Q Consensus 243 i~~~-~~~li~Dea---y~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g----~~G~R~G~i~~~~~~~~~l~-------- 306 (423)
+|+. |+++|+|.. +..+ ... . ..+..+++.| +|.|| +.|.|+||+++++++++.+.
T Consensus 220 la~~~g~~vivd~d~~a~g~~---~~~-~---~~g~D~~~~s-~kk~~~~~~~~Gp~~G~l~~~~~~~~~l~~~~~g~~~ 291 (438)
T 1wyu_A 220 AAHGAGALFVAVADPLSLGVL---KPP-G---AYGADIAVGD-GQSLGLPMGFGGPHFGFLATKKAFVRQLPGRLVSETV 291 (438)
T ss_dssp HHHHTTCEEEEECCTTGGGTB---CCH-H---HHTCSEEEEE-CTTTTCCCGGGCSCCEEEEECGGGGGGCCSCCEEEEE
T ss_pred HHHHcCCEEEEEechhhccCc---CCC-c---cCCCCEEEEC-CcccCCCccCCCCCeeEEEEcHHHHHhCCCceecccc
Confidence 9987 999996632 3221 111 1 1222355555 55543 56778999999988765541
Q ss_pred --------------------HhcCCCCC---cHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCC
Q 014492 307 --------------------RAKQPYNV---SVAAEVAACAALQ--NPIYLEKVKEALIKERERLFKLLKDVPFLNPYPS 361 (423)
Q Consensus 307 --------------------~~~~~~~~---~~~~~~a~~~~l~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~ 361 (423)
+....+++ +.....++..++. ..+.+++..++++++++++.+.|++++++.+.+.
T Consensus 292 ~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~ 371 (438)
T 1wyu_A 292 DVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPGVRPFTP 371 (438)
T ss_dssp BTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCEECSC
T ss_pred ccCCCcceeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCeEECCC
Confidence 11122232 2333222221122 2345788889999999999999999866666544
Q ss_pred CceEEEEEeCCCCCHHHHHHHHHhCCcEE--EeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492 362 YSNFILCEVTSGMDAKKLKDDLAKMGVMI--RHYNNKELKGYVRVSVG---KPEHTDALMECLMHL 422 (423)
Q Consensus 362 ~~~~~~~~~~~~~~~~~l~~~L~~~gI~v--~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l 422 (423)
...|.++.+..+.+..++.+.|.++||.+ +++..+. ++++||+++ +.++++++.++|+++
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~L~~~gi~v~~~~~~~~~-~~~lRis~~~~~t~edi~~~~~~l~~~ 436 (438)
T 1wyu_A 372 KPFFNEFALALPKDPEAVRRALAERGFHGATPVPREYG-ENLALFAATELHEEEDLLALREALKEV 436 (438)
T ss_dssp SSBCSEEEEECSSCHHHHHHHHHHTTCCCCEECCTTSC-SSEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred CCeEEEEEEeCCCCHHHHHHHHHHCCceeccccccccC-CCeEEEEecccCCHHHHHHHHHHHHHH
Confidence 34443333322357899999999999998 5554322 689999998 666777777777654
No 209
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.93 E-value=8.7e-25 Score=219.00 Aligned_cols=313 Identities=13% Similarity=0.101 Sum_probs=199.5
Q ss_pred CeeEcCCCCCCCCCCHHHHHHHhc-CCCC-CCCC-CcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCC---
Q 014492 96 DIVKIDANENPYGPPPEVREALGQ-LKFP-YIYP-DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDP--- 169 (423)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~-~~~~-~~Y~-~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~--- 169 (423)
.++|+..+... +++.+++.+ +..+ ..|+ .++..+||++++++++. +++++|+|+++++..++.+++++
T Consensus 42 ~ylD~~~~~~~----~~v~~a~~~~l~~~~~~y~~~~~~~~l~~~la~~~~~--~~v~~t~~gt~A~~~al~~~~~~~~~ 115 (467)
T 2oqx_A 42 VFIDLLTDSGT----GAVTQSMQAAMMRGDEAYSGSRSYYALAESVKNIFGY--QYTIPTHQGRGAEQIYIPVLIKKREQ 115 (467)
T ss_dssp CSEECSCCSSC----SCCCHHHHHHTTSCCCCSSSCHHHHHHHHHHHHHHCC--SEEEEEC--CCSHHHHHHHHHHHHHH
T ss_pred eeEecccCCCc----HHHHHHHHHHhccCcceeccCchhHHHHHHHHHHhCc--CcEEEcCCcHHHHHHHHHHHhccccc
Confidence 45676543322 555566554 2222 3564 45678999999999985 68999999999999999998888
Q ss_pred --C----CeEEEcCCCchhhHHHHHHCCCeEEEec------CC----CCCCCCHHHHHHHhhc---CCceEEEEcCCCCC
Q 014492 170 --G----DKIVDCPPTFTMYEFDAAVNGAAVVKVP------RK----SDFSLNVELIADAVER---EKPKCIFLTSPNNP 230 (423)
Q Consensus 170 --g----d~Vl~~~p~y~~~~~~~~~~g~~~~~v~------~~----~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NP 230 (423)
| |.|++..+.|..+.......|+.++... .+ .++.+|+++|++++++ .++++|++++|+||
T Consensus 116 ~~G~~~~d~Ii~~~~h~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~ 195 (467)
T 2oqx_A 116 EKGLDRSKMVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNS 195 (467)
T ss_dssp HHCCCTTTCEEEESSCCHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCG
T ss_pred cCCCCccceEEecccccccchhhhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccC
Confidence 8 9888774444555556666788776542 11 2356899999999974 37999999999999
Q ss_pred c-CcCCCHHHHHHHHc---C-CCEEEEccCCcc----------ccCCCchhhhh-----ccCCcEEEEccChhhhccc-C
Q 014492 231 D-GSIINDEDLLKILE---M-PILVVLDEAYTE----------FSGLESRMEWV-----KKHDNLIVLRTFSKRAGLA-G 289 (423)
Q Consensus 231 t-G~~~~~~~l~~i~~---~-~~~li~Deay~~----------~~~~~~~~~~~-----~~~~~~i~i~S~SK~~g~~-G 289 (423)
| |.+++.+++++|++ . |++||+|+++.. ..+.+.....+ ...+ +++.|+||.+|++ |
T Consensus 196 ~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d--~~~~s~sK~~g~~~G 273 (467)
T 2oqx_A 196 AGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYAD--MLAMSAKKDAMVPMG 273 (467)
T ss_dssp GGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCS--EEEEESSSTTCCSSC
T ss_pred CCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccCC--eEEEecccccCCCCc
Confidence 8 89999877666655 3 999999976543 11112111111 1223 4578999999876 5
Q ss_pred ccccccccCHH----HHHHHHHhc---CC---C-CCcHHHHHHHHHHhCChHHH-HHHHHHHHHHHHHHHHHHccCCCCe
Q 014492 290 LRVGYGAFPLS----IIEYLWRAK---QP---Y-NVSVAAEVAACAALQNPIYL-EKVKEALIKERERLFKLLKDVPFLN 357 (423)
Q Consensus 290 ~R~G~i~~~~~----~~~~l~~~~---~~---~-~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~ 357 (423)
||++++++ .+..+.... .. + ..+.....++...+. +++ ++..++.+++++++.+.|++++...
T Consensus 274 ---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 348 (467)
T 2oqx_A 274 ---GLLCMKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLY--DGMNLDWLAYRIAQVQYLVDGLEEIGVVC 348 (467)
T ss_dssp ---EEEEECSGGGHHHHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred ---eEEEecChhHHHHHHHHHHhhhccCCcccccchhhhHHHHHHHhhH--hhhhHHHHHHHHHHHHHHHHHHHHCCCee
Confidence 78887765 334433321 11 1 223333322222221 122 1234445677888888888774333
Q ss_pred ecCCCceEEEEEeCC---CCC-----HHHHHHHH-HhCCcEEEeCCC---C----------CCCCeEEEEecCh-hhHHH
Q 014492 358 PYPSYSNFILCEVTS---GMD-----AKKLKDDL-AKMGVMIRHYNN---K----------ELKGYVRVSVGKP-EHTDA 414 (423)
Q Consensus 358 ~~p~~~~~~~~~~~~---~~~-----~~~l~~~L-~~~gI~v~~~~~---~----------~~~~~iRis~~~~-~~~~~ 414 (423)
. |.+++++|+++++ +.+ ...+.+.| .++||.+.+++. . ...+++||+++.. .+.++
T Consensus 349 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~~t~e~ 427 (467)
T 2oqx_A 349 Q-QAGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTH 427 (467)
T ss_dssp E-EECSSCEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTSCHHH
T ss_pred e-cCCceEEEEechhhcccCCcccccHHHHHHHHHHhcCceecccccccccccccccccccCccCeEEEEecCCCCCHHH
Confidence 4 6778899998841 333 45568888 789999987442 0 1247999999743 33355
Q ss_pred HHHHHhhh
Q 014492 415 LMECLMHL 422 (423)
Q Consensus 415 l~~al~~l 422 (423)
+.+++++|
T Consensus 428 i~~~~~~l 435 (467)
T 2oqx_A 428 MDFIIEAF 435 (467)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55555543
No 210
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.93 E-value=5.2e-23 Score=201.28 Aligned_cols=299 Identities=16% Similarity=0.131 Sum_probs=210.8
Q ss_pred CCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh-------cCCCCeEEEcCCCc
Q 014492 109 PPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-------LDPGDKIVDCPPTF 180 (423)
Q Consensus 109 ~~~~v~~al~~~-~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l-------~~~gd~Vl~~~p~y 180 (423)
.++++.+++.+. .....++.++..++|+++++++|.+ ++++++++++++..++.++ +++||+|+++.|+|
T Consensus 13 ~~~~~~~a~~~~~~~~~~~~~~~~~~l~~~la~~~~~~--~~i~~~sGt~a~~~al~~~~~~~~~~~~~g~~Vi~~~~~~ 90 (390)
T 3b8x_A 13 WDDLEYKAIQSVLDSKMFTMGEYVKQYETQFAKTFGSK--YAVMVSSGSTANLLMIAALFFTKKPRLKKGDEIIVPAVSW 90 (390)
T ss_dssp CCHHHHHHHHHHHHHTCCSSCHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHTTSSSSCSCCTTCEEEEESSSC
T ss_pred CCHHHHHHHHHHHHcCCCCCChHHHHHHHHHHHHHCCC--cEEEECCHHHHHHHHHHHHHhhhhcCCCCcCEEEECCCCc
Confidence 357788887663 2223346667899999999999975 5666666678999999988 78999999999999
Q ss_pred hhhHHHHHHCCCeEEEecCCCC-CCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCcc
Q 014492 181 TMYEFDAAVNGAAVVKVPRKSD-FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTE 258 (423)
Q Consensus 181 ~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~ 258 (423)
..+...++..|++++.++.+++ +.+|++++++.++ +++++|+++| ++|...+.+++.++|+. |+++|+|++|..
T Consensus 91 ~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~-~~~~~v~~~~---~~g~~~~~~~i~~l~~~~~~~li~D~a~~~ 166 (390)
T 3b8x_A 91 STTYYPLQQYGLRVKFVDIDINTLNIDIESLKEAVT-DSTKAILTVN---LLGNPNNFDEINKIIGGRDIILLEDNCESM 166 (390)
T ss_dssp HHHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHCC-TTEEEEEEEC---GGGCCCCHHHHHHHHTTSCCEEEEECTTCT
T ss_pred HHHHHHHHHcCCEEEEEecCccccCcCHHHHHHHhC-cCCeEEEEEC---CccChhhHHHHHHHHHHcCCEEEEECcCcc
Confidence 9999999999999999997654 8899999999997 5899999874 67888999999999998 999999999985
Q ss_pred cc-CCCchhhhhccCCcEEEEc--cChhhhcccCccccccccCH-HHHHHHHHhcC------------------------
Q 014492 259 FS-GLESRMEWVKKHDNLIVLR--TFSKRAGLAGLRVGYGAFPL-SIIEYLWRAKQ------------------------ 310 (423)
Q Consensus 259 ~~-~~~~~~~~~~~~~~~i~i~--S~SK~~g~~G~R~G~i~~~~-~~~~~l~~~~~------------------------ 310 (423)
+. +... ..+... ++... ..+|.++ +| +.|++++++ ++.+++.....
T Consensus 167 g~~~~~~---~~g~~~-~~~~~s~~~~k~~~-~g-~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 240 (390)
T 3b8x_A 167 GATFNNK---CAGTFG-LMGTFSSFYSNHIA-TM-EGGCIVTDDEEIYHILLCIRAHGWTRNLPKKNKVTGVKSDDQFEE 240 (390)
T ss_dssp TCEETTE---ETTSSS-SEEEEECCTTSSSC-SS-SCEEEEESCHHHHHHHHHHTBTTBSTTSCSEETTTEECCSCTTTS
T ss_pred cCEECCc---cccccc-ceEEEEccCCCCCc-cC-CceEEEeCCHHHHHHHHHHHhcCCCcccccccccccccccccccc
Confidence 43 2111 111111 12222 2345543 33 348998875 66665554321
Q ss_pred -------CC--CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCC--CceE--EEEEeCC--CCC
Q 014492 311 -------PY--NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPS--YSNF--ILCEVTS--GMD 375 (423)
Q Consensus 311 -------~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~--~~~~--~~~~~~~--~~~ 375 (423)
.+ ..+.+...++...+ +++++..++.+++++++.+.|++++++.+.+. .+.+ +++.++. +.+
T Consensus 241 ~~~~~~~g~~~~~~~~~aa~~l~~l---~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 317 (390)
T 3b8x_A 241 SFKFVLPGYNVRPLEMSGAIGIEQL---KKLPRFISVRRKNAEYFLDKFKDHPYLDVQQETGESSWFGFSFIIKKDSGVI 317 (390)
T ss_dssp SSCBCSCCCBCCCCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHTTCSSEEECCCCSBCCCCEEEEEECTTSCCC
T ss_pred ccceeccccccCcCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCcccEEEEEEecCcCccc
Confidence 01 14555555554444 56778888899999999999998866655432 3333 5566653 567
Q ss_pred HHHHHHHHHhCCcEEEeCCC-----C-C---------C----------CCeEEEEecChhhHHHHHHHHhhh
Q 014492 376 AKKLKDDLAKMGVMIRHYNN-----K-E---------L----------KGYVRVSVGKPEHTDALMECLMHL 422 (423)
Q Consensus 376 ~~~l~~~L~~~gI~v~~~~~-----~-~---------~----------~~~iRis~~~~~~~~~l~~al~~l 422 (423)
.+++.+.|.++||.++.... . + . .+.|||++....+.++++..++.|
T Consensus 318 ~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~t~~di~~i~~~l 389 (390)
T 3b8x_A 318 RKQLVENLNSAGIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNGLFVGNHQIELFDEIDYLREVL 389 (390)
T ss_dssp HHHHHHHHHHTTBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHEEEEECCSSCCHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCCeeeecCCchhhcchhhhcCCCCCcCCChHHHHHhcCEEEeeCCCCCCHHHHHHHHHhh
Confidence 89999999999999986311 1 0 0 025999987544445566555554
No 211
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.93 E-value=1.8e-24 Score=213.92 Aligned_cols=279 Identities=17% Similarity=0.163 Sum_probs=194.9
Q ss_pred CCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHH----HHCCCeEEEe-cCC
Q 014492 126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKV-PRK 200 (423)
Q Consensus 126 Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v-~~~ 200 (423)
|+++...++++++++++|.+ +.|++++ +++++..++..++++||+|+++.++|..+...+ +..|++++.+ +.+
T Consensus 55 ~~~~~~~~l~~~la~~~g~~-~~v~~~s-Gt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 132 (421)
T 2ctz_A 55 IMNPTVDVLEKRLAALEGGK-AALATAS-GHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSREE 132 (421)
T ss_dssp TBCHHHHHHHHHHHHHHTCS-EEEEESS-HHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTTC
T ss_pred CCChHHHHHHHHHHHHhCCC-ceEEecC-HHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCC
Confidence 34445689999999999965 4555555 589999999988999999999999998766654 6789999999 743
Q ss_pred CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCC-ccccCCCchhhhhccCCcEEEE
Q 014492 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAY-TEFSGLESRMEWVKKHDNLIVL 278 (423)
Q Consensus 201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay-~~~~~~~~~~~~~~~~~~~i~i 278 (423)
|++++++.++ +++++|++++|+||||.+.+.+++.++|+. |+++|+|++| ... ...... ..+.++++
T Consensus 133 -----d~~~l~~~i~-~~~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~~livD~~~~~~g-~~~~~~----~~~~Di~~ 201 (421)
T 2ctz_A 133 -----RPEEFLALTD-EKTRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFGMGG-YLLRPL----AWGAALVT 201 (421)
T ss_dssp -----CHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGGGG-TSCCGG----GGTCSEEE
T ss_pred -----CHHHHHHhhc-cCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccccc-ccCCcc----ccCCeEEE
Confidence 7999999997 689999999999999999999999999998 9999999999 533 222222 12345899
Q ss_pred ccChhhhcccCccccccccC---HHH----HHHHHHh---------------------------c-CCCCCcHHHHHHHH
Q 014492 279 RTFSKRAGLAGLRVGYGAFP---LSI----IEYLWRA---------------------------K-QPYNVSVAAEVAAC 323 (423)
Q Consensus 279 ~S~SK~~g~~G~R~G~i~~~---~~~----~~~l~~~---------------------------~-~~~~~~~~~~~a~~ 323 (423)
.|++|.++.+|.|+|++++. +++ .+.+... . ....+++....++.
T Consensus 202 ~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~ 281 (421)
T 2ctz_A 202 HSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQALGPFEAWVVL 281 (421)
T ss_dssp EETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHH
T ss_pred ECCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHH
Confidence 99999999899999988773 111 1122110 0 01244555555555
Q ss_pred HHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCee--cC-----------------CCceEEEEEeCCC-CCHHHHHHHH
Q 014492 324 AALQNPIYLEKVKEALIKERERLFKLLKDVPFLNP--YP-----------------SYSNFILCEVTSG-MDAKKLKDDL 383 (423)
Q Consensus 324 ~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~p-----------------~~~~~~~~~~~~~-~~~~~l~~~L 383 (423)
..++. +....++..++.+++.+.|++++.+.. +| ..+..+.+.+.+. .+...+.+.|
T Consensus 282 ~~l~~---l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~~~~~~~~~~~~~~~~~~~g~ivsf~l~~~~~~~~~~~~~l 358 (421)
T 2ctz_A 282 LGMET---LSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHPHHDRAQKYFKGKPGAVLTFGLKGGYEAAKRFISRL 358 (421)
T ss_dssp HHHTT---HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHHTTCCCSEEEEEETTHHHHHHHHHHTC
T ss_pred cCcch---HHHHHHHHHHhHHHHHHHHHhCCCeeEEECCCCCCCCCHHHHHHhccCCCceEEEEEeCCCHHHHHHHHHhC
Confidence 55543 445556666889999999998876653 22 3466788888631 1223333433
Q ss_pred HhCCcEEEeCCC-----------------------CCCCCeEEEEecChhhHHHHHHHHhh
Q 014492 384 AKMGVMIRHYNN-----------------------KELKGYVRVSVGKPEHTDALMECLMH 421 (423)
Q Consensus 384 ~~~gI~v~~~~~-----------------------~~~~~~iRis~~~~~~~~~l~~al~~ 421 (423)
...++.++.|+. ...++.||+|++.++ .+++.+.|++
T Consensus 359 ~~~~~~~~~G~~~sl~~~~~~~~h~~~~~~~~~~~g~~~~~vRlS~g~e~-~~~li~~l~~ 418 (421)
T 2ctz_A 359 KLISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSPEMVRLSVGLEH-VEDLKAELKE 418 (421)
T ss_dssp SSSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHTCCTTEEEEECCSSC-HHHHHHHHHH
T ss_pred CcceecccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeCCCC-HHHHHHHHHH
Confidence 333434433311 011489999999764 5777777764
No 212
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.93 E-value=4.9e-24 Score=215.71 Aligned_cols=287 Identities=12% Similarity=0.056 Sum_probs=207.3
Q ss_pred HHHHHHHHHhCCC--CCcEEEeCCHHHHHHHHHHHhcC--------CC-----C-eEEEcCCCchhhHHHHHHCCC---e
Q 014492 133 RLRAALAKDSGLE--SDHILVGCGADELIDLIMRCVLD--------PG-----D-KIVDCPPTFTMYEFDAAVNGA---A 193 (423)
Q Consensus 133 ~lr~~ia~~~g~~--~~~i~~t~G~~~al~~~~~~l~~--------~g-----d-~Vl~~~p~y~~~~~~~~~~g~---~ 193 (423)
++++.+++++|++ ++++++|+|+++++..++.++.. +| + .|+++.+.|..+...++..|. +
T Consensus 136 ~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~~~~~~~g~g~~~ 215 (504)
T 2okj_A 136 ITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGFGTDN 215 (504)
T ss_dssp HHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGG
T ss_pred HHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHHHHHHHHcCCCccc
Confidence 4556678888987 78999999999999999887743 56 6 788999999999999988877 8
Q ss_pred EEEecCCCCCCCCHHHHHHHhhcC-----CceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCC-Cchh
Q 014492 194 VVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGL-ESRM 266 (423)
Q Consensus 194 ~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~-~~~~ 266 (423)
++.+|.++++.+|+++|++++.+. ++++|++++|+||||.+.+.++|.++|+. |+++++|++|..+... +...
T Consensus 216 v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~a~~~~~~~~~~~~ 295 (504)
T 2okj_A 216 VILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHR 295 (504)
T ss_dssp EEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTG
T ss_pred EEEEecCCCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEehhhhhHHHhCHhhH
Confidence 999998778899999999999642 58999999999999999999999999998 9999999999876532 1111
Q ss_pred hhhc-cCCcEEEEccChhhhcccCccccccccCH-HHHHHHHHhcCCCC-----------------------CcHHHHHH
Q 014492 267 EWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWRAKQPYN-----------------------VSVAAEVA 321 (423)
Q Consensus 267 ~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~-~~~~~l~~~~~~~~-----------------------~~~~~~~a 321 (423)
..+. .....+++.+++|.++.| .++|+++.++ ++++........|- ...+.+.+
T Consensus 296 ~~~~g~~~~D~i~~~~hK~~~~p-~~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~l~~~a 374 (504)
T 2okj_A 296 HKLNGIERANSVTWNPHKMMGVL-LQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWL 374 (504)
T ss_dssp GGGTTGGGCSEEEECTTSTTCCC-SCCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCHHHHHH
T ss_pred hhcCCcccCCEEEECchhhcCCC-cceEEEEEECHHHHHHHhcCCCccccCCcccccCcCCcccCCCCCCCCccHHHHHH
Confidence 1111 112236778899987744 6899999865 46554332211110 13556666
Q ss_pred HHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeec----CCCceEEEEEeCCCC---------------CHHHHHHH
Q 014492 322 ACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPY----PSYSNFILCEVTSGM---------------DAKKLKDD 382 (423)
Q Consensus 322 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~----p~~~~~~~~~~~~~~---------------~~~~l~~~ 382 (423)
+..++. .+.+++..++..++++++.+.|++++++.+. |..+++++...+... ...++.+.
T Consensus 375 ~l~~lg-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~p~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 453 (504)
T 2okj_A 375 MWKAKG-TVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKAL 453 (504)
T ss_dssp HHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTCTTEEESSSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHTTHHHHHHHH
T ss_pred HHHHhh-HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCccccccccchhhHHHHHHHHHHHHHH
Confidence 666665 4567888889999999999999998666653 445555554444210 13568888
Q ss_pred HHhCCcEE-EeCCCCCCCCeEEEEec----ChhhHHHHHHHHhh
Q 014492 383 LAKMGVMI-RHYNNKELKGYVRVSVG----KPEHTDALMECLMH 421 (423)
Q Consensus 383 L~~~gI~v-~~~~~~~~~~~iRis~~----~~~~~~~l~~al~~ 421 (423)
|.++|+.+ .+....+..+++||+++ +.++++++.++|++
T Consensus 454 L~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edi~~~~~~l~~ 497 (504)
T 2okj_A 454 MMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIER 497 (504)
T ss_dssp HHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHH
T ss_pred HHhCCcEEEEeeEECCceEEEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 88888644 33221222368999996 55566666666654
No 213
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.92 E-value=1.3e-23 Score=204.86 Aligned_cols=281 Identities=11% Similarity=0.062 Sum_probs=198.3
Q ss_pred hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhH--HHHHHCC--CeEEEecCCC-----
Q 014492 131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE--FDAAVNG--AAVVKVPRKS----- 201 (423)
Q Consensus 131 ~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~--~~~~~~g--~~~~~v~~~~----- 201 (423)
..++++.+++++|.+ +.|++|+|++++++.++. ++.+||+|++..+.|..+. ..++..| .+++.++.+.
T Consensus 37 ~~~~~~~l~~~~~~~-~~v~~~~sgt~a~~~~~~-~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~ 114 (379)
T 3ke3_A 37 MNDLLSNLKTVYNAE-AAVIIPGSGTYGMEAVAR-QLTIDEDCLIIRNGWFSYRWTQILEKGKFAKSSTVLTAERTEDTE 114 (379)
T ss_dssp HHHHHHHHHHHHTCS-EEEEEESCHHHHHHHHHH-HHCTTCEEEEEECSHHHHHHHHHHHHHCCSSEEEEEECEESSCCS
T ss_pred HHHHHHHHHHHhCCC-CEEEEcCChhHHHHHHHH-hCCCCCeEEEEeCCchhHHHHHHHHHhCCCCceEEEecccccccc
Confidence 457888999999986 789999999999999886 4579999999999997543 3445555 4777777532
Q ss_pred ---C-CCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCC---HHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCC
Q 014492 202 ---D-FSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN---DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHD 273 (423)
Q Consensus 202 ---~-~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~---~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~ 273 (423)
. ..+|++++++.+.+.++++|++++++||||.+++ .+++.++|+. |+++|+|+++. ... +.. +...+
T Consensus 115 ~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g~~-~~~---~~~~~ 189 (379)
T 3ke3_A 115 APKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-GCV-WLD---MKELG 189 (379)
T ss_dssp SCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-TTC-CCC---HHHHT
T ss_pred ccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-CCc-ccc---ccccC
Confidence 1 2589999999996458999999999999999999 6666677765 99999999987 321 111 11223
Q ss_pred cEEEEccChhhhcccCccccccccCHHHHHHHHHhc----------------------CC--CCCcHHHHHHHHHHhCCh
Q 014492 274 NLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK----------------------QP--YNVSVAAEVAACAALQNP 329 (423)
Q Consensus 274 ~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~----------------------~~--~~~~~~~~~a~~~~l~~~ 329 (423)
..+++.|++|.++ .+.++|++++++++++.+.... .. ++.+...+.++.++|+..
T Consensus 190 ~d~~~~s~~K~l~-~~~g~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~ 268 (379)
T 3ke3_A 190 IDVLISAPQKGWS-STPCAGLVMLSAAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATMPTDSLRQFRDAILEA 268 (379)
T ss_dssp CSEEEECTTTTTC-SCCCEEEEEECHHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHH
T ss_pred CCEEEecchhhcC-CCCceEEEEECHHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCCCHHHHHHHHHHHHHH
Confidence 4588899999876 3345899999999988776411 11 266777777777777532
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHccCCCCeecCC--CceEEE-EEeCCCCCHHHHHHHHHhCCcEEEeCCCC-----CCC
Q 014492 330 --IYLEKVKEALIKERERLFKLLKDVPFLNPYPS--YSNFIL-CEVTSGMDAKKLKDDLAKMGVMIRHYNNK-----ELK 399 (423)
Q Consensus 330 --~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~--~~~~~~-~~~~~~~~~~~l~~~L~~~gI~v~~~~~~-----~~~ 399 (423)
+.+++.+++++++++++.+.|+++++....+. .+..+. +..+ + ....+.+.|.++||.+.++..+ ...
T Consensus 269 ~~~g~~~~~~~~~~l~~~l~~~l~~~g~~~~~~~~~~~~~i~~~~~~-~-~~~~~~~~L~~~Gi~v~~g~~~~~~~~~~~ 346 (379)
T 3ke3_A 269 KEIGFDILRDAQWELGNRVRKVLTDKGIESVAAEGFEAPGVVVSYTE-R-DDMHKGSAFAEAGLQIAAGVPLKVGEPDNF 346 (379)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSBCTTCBCSSEEEEECS-C-HHHHSSHHHHHTTCCCEECCCCSSCCCTTC
T ss_pred HHhcHHHHHHHHHHHHHHHHHHHHHcCCEecCCccccCceEEEEccC-C-cchHHHHHHHHCCeEEeCCccccccccCcC
Confidence 22578888899999999999998864332222 133333 3332 2 1222367788999999987642 236
Q ss_pred CeEEEEecC---hhhHHHHHHHHhh
Q 014492 400 GYVRVSVGK---PEHTDALMECLMH 421 (423)
Q Consensus 400 ~~iRis~~~---~~~~~~l~~al~~ 421 (423)
+.+||++.. .++++++.++|++
T Consensus 347 ~~lRis~~~~~t~~di~~~~~~l~~ 371 (379)
T 3ke3_A 347 KTFRLGLFGLDKLTDIDGTVERFEK 371 (379)
T ss_dssp CEEEEECCSHHHHTCHHHHHHHHHH
T ss_pred CEEEEeCCcCCCHHHHHHHHHHHHH
Confidence 899999863 4455555555543
No 214
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.92 E-value=2.4e-23 Score=208.04 Aligned_cols=317 Identities=13% Similarity=0.110 Sum_probs=206.4
Q ss_pred CeeEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCCc----c---hHHHH----HHHHHHhCCCCCc---EEEeCCHHHH
Q 014492 96 DIVKIDANENPYGPPPEVREALGQL-K--FPYIYPDP----E---SRRLR----AALAKDSGLESDH---ILVGCGADEL 158 (423)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~Y~~~----g---~~~lr----~~ia~~~g~~~~~---i~~t~G~~~a 158 (423)
+.|.|-.++|. .+|.|++++... . +..+||.. | ..+++ +.+++++|.+.+. .++++|++++
T Consensus 55 ~~i~lias~n~--~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~l~g~~~~~~~~~v~~~sGt~A 132 (490)
T 2a7v_A 55 RGLELIASENF--CSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPA 132 (490)
T ss_dssp HSEECCTTCCC--CCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHH
T ss_pred cCceEECCCCC--CCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHHHcCCCcccCceEEeCCchHHH
Confidence 34777776665 479999999873 2 22344421 1 12455 8899999987753 3455577889
Q ss_pred HHHHHHHhcCCCCeEEEcCCCchhhHH--------HHHHCCCeE--EEecCC-CCCCCCHHHHHHHhhcCCceEEEEcCC
Q 014492 159 IDLIMRCVLDPGDKIVDCPPTFTMYEF--------DAAVNGAAV--VKVPRK-SDFSLNVELIADAVEREKPKCIFLTSP 227 (423)
Q Consensus 159 l~~~~~~l~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~~--~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p 227 (423)
+..++.++++|||+|++.++.|..+.. .+...|..+ +.++.+ +++.+|++++++.+.+.++|+|+++++
T Consensus 133 n~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~~~~~iD~d~le~~l~~~~~klIi~~~s 212 (490)
T 2a7v_A 133 NLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTS 212 (490)
T ss_dssp HHHHHHHHCCSCEECCC-------------------------------CCBCTTTCSBCHHHHHHHHHHHCCSEEEECCS
T ss_pred HHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEecccccccCCcCHHHHHHHHhhcCCcEEEEcCC
Confidence 999999999999999999998864321 223455543 444443 467899999999997567899998888
Q ss_pred CCCcCcCCCHHHHHHHHcC-CCEEEEccCCcc-ccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHH-----
Q 014492 228 NNPDGSIINDEDLLKILEM-PILVVLDEAYTE-FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS----- 300 (423)
Q Consensus 228 ~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~-~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~----- 300 (423)
+|| ...+.+++.+||+. |+++++|++|.. +...+.....+. ...+++.|+||.+ .|.|.|+++++++
T Consensus 213 ~~~--~~~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~--~aDiv~~S~hK~l--~Gp~GG~i~~~~~~~~~~ 286 (490)
T 2a7v_A 213 AYA--RLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK--HADIVTTTTHKTL--RGARSGLIFYRKGVKAVD 286 (490)
T ss_dssp SCC--SCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGG--TCSEEEEESSGGG--CSCSCEEEEEECSEEEEE
T ss_pred CCC--CcccHHHHHHHHHHcCCEEEEccccccccccCCcCCCCCC--CCCEEEECCcccC--ccccchheeeccchhccc
Confidence 987 46789999999987 999999999752 221111111111 2348889999987 4677899998763
Q ss_pred ----------HHHHHHHhcCCC---CCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeec--CCCc
Q 014492 301 ----------IIEYLWRAKQPY---NVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPY--PSYS 363 (423)
Q Consensus 301 ----------~~~~l~~~~~~~---~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~--p~~~ 363 (423)
+.+++.+...++ +++.....++..++.. .+.+++..+++.++++++.+.|.+.+ +.+. +...
T Consensus 287 ~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~~~~~~~~~~~~~~~na~~L~~~L~~~G-~~v~~~~t~t 365 (490)
T 2a7v_A 287 PKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLERG-YSLVSGGTDN 365 (490)
T ss_dssp TTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTT-CEEGGGSCSS
T ss_pred ccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHcC-cEEecCCCCC
Confidence 456666554432 3444444444444433 12347788889999999999999876 4443 2456
Q ss_pred eEEEEEeCC-CCCHHHHHHHHHhCCcEEEeCCC-----CCCCCeEEEEec-------ChhhHHHHHHHHhh
Q 014492 364 NFILCEVTS-GMDAKKLKDDLAKMGVMIRHYNN-----KELKGYVRVSVG-------KPEHTDALMECLMH 421 (423)
Q Consensus 364 ~~~~~~~~~-~~~~~~l~~~L~~~gI~v~~~~~-----~~~~~~iRis~~-------~~~~~~~l~~al~~ 421 (423)
+++|+++.+ +.+..++.+.|.++||.+..+.. +..++.|||+.. .+++.+++.++|.+
T Consensus 366 ~lv~vdl~~~g~~~~~~~~~L~~~GI~v~~~~~p~d~~p~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~ 436 (490)
T 2a7v_A 366 HLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDE 436 (490)
T ss_dssp SEEEEECTTTTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCCHHHHHHHHHhCCeEEecCccCCCCCCCCCCceEecccccccCCCCHHHHHHHHHHHHH
Confidence 788999863 56888899999999999985322 234678999752 35667777777654
No 215
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.91 E-value=1e-23 Score=211.46 Aligned_cols=320 Identities=13% Similarity=0.062 Sum_probs=203.9
Q ss_pred CCCCCCeeEcCCCCC--CCC-CCHHHHHHHhcCC------CCCCCCCcchHHHHHHHHH----HhCCCCCcEEEeCCHHH
Q 014492 91 GRKPEDIVKIDANEN--PYG-PPPEVREALGQLK------FPYIYPDPESRRLRAALAK----DSGLESDHILVGCGADE 157 (423)
Q Consensus 91 ~~~~~~~i~l~~~~~--~~~-~~~~v~~al~~~~------~~~~Y~~~g~~~lr~~ia~----~~g~~~~~i~~t~G~~~ 157 (423)
..+++.+|||..|.. .++ .+|++.+|+.+.. +...|+.....++++++++ +++...++|++++|+++
T Consensus 59 d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~l~~~~~~~~~~v~f~~sGse 138 (472)
T 1ohv_A 59 DVDGNRMLDLYSQISSIPIGYSHPALVKLVQQPQNVSTFINRPALGILPPENFVEKLRESLLSVAPKGMSQLITMACGSC 138 (472)
T ss_dssp BTTSCEEEESSHHHHTCSSCBTCHHHHHHHHCGGGHHHHHCCCCTTTSCBTTHHHHHHHTGGGGCCTTCCEEEEESSHHH
T ss_pred eCCCCEEEECCCCHhhcccCCCCHHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHhCCCCcCEEEEeCCchh
Confidence 345778999987743 355 4899999997631 2223443334567777665 44446789999999999
Q ss_pred HHHHHHHHhc--------C-----------------CC---CeEEEcCCCchhhHHHHH-HCCCe-------------EE
Q 014492 158 LIDLIMRCVL--------D-----------------PG---DKIVDCPPTFTMYEFDAA-VNGAA-------------VV 195 (423)
Q Consensus 158 al~~~~~~l~--------~-----------------~g---d~Vl~~~p~y~~~~~~~~-~~g~~-------------~~ 195 (423)
|+..+++.+. . || +.|++.++.|+.+...+. ..|.. .+
T Consensus 139 A~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~~~ 218 (472)
T 1ohv_A 139 SNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIA 218 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCCEE
T ss_pred HHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCCccc
Confidence 9999998763 1 45 899999999986655442 33321 11
Q ss_pred EecCCC-----C--C-----CCCHHHHHHHhhcC-----CceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEc
Q 014492 196 KVPRKS-----D--F-----SLNVELIADAVERE-----KPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLD 253 (423)
Q Consensus 196 ~v~~~~-----~--~-----~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~D 253 (423)
.+|... . + ..|+++|++.+++. ++++|++++.+|++|.+.+ ++++.++|+. |+++|+|
T Consensus 219 ~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~D 298 (472)
T 1ohv_A 219 PFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVD 298 (472)
T ss_dssp CCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEe
Confidence 232100 0 0 12688999988641 7888888877889998765 5666666665 9999999
Q ss_pred cCCccccCCCch--hhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHh--cCCCCCcHHHHHHHHHHhCCh
Q 014492 254 EAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQNP 329 (423)
Q Consensus 254 eay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~l~~~ 329 (423)
|+|..|...+.. ....+.. ..+-+.||||.+ +.| ||++ ++++. .+... ...++.+++++.++.++|+..
T Consensus 299 Ev~~g~g~~g~~~~~~~~gv~-~~~Di~t~sK~~-l~G---G~~~-~~~~~-~~~~~~~~~T~~~~~~~~aaa~aal~~~ 371 (472)
T 1ohv_A 299 EVQTGGGSTGKFWAHEHWGLD-DPADVMTFSKKM-MTG---GFFH-KEEFR-PNAPYRIFNTWLGDPSKNLLLAEVINII 371 (472)
T ss_dssp CTTTTTTTTSSSSGGGGGCCS-SCCSEEEECGGG-SSE---EEEE-CGGGS-CSSSSSSCCSSSSCHHHHHHHHHHHHHH
T ss_pred CcccCCCCCCCchhccccCCC-CCCCEEEEcccc-ccC---CccC-chhhc-ccccccccCccCccHHHHHHHHHHHHHH
Confidence 999876654321 1111111 002234889985 445 7766 55542 11111 123567889998888888532
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccC----CC-CeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEE
Q 014492 330 IYLEKVKEALIKERERLFKLLKDV----PF-LNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRV 404 (423)
Q Consensus 330 ~~~~~~~~~~~~~~~~l~~~L~~~----~~-~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRi 404 (423)
.- +...++++++++++.+.|+++ +. +...++.|.|+++++++..+...+++.|.++||.+.+++ .++|||
T Consensus 372 ~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g----~~~iRi 446 (472)
T 1ohv_A 372 KR-EDLLSNAAHAGKVLLTGLLDLQARYPQFISRVRGRGTFCSFDTPDESIRNKLISIARNKGVMLGGCG----DKSIRF 446 (472)
T ss_dssp HH-TTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEEEEETTEEEEECSSHHHHHHHHHHHHHTTEECEEET----TTEEEE
T ss_pred Hh-CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEeecCCceEEEEEeCChhHHHHHHHHHHHCCeEEecCC----CCEEEE
Confidence 11 245667777777777777654 32 332334577888888633346788999999999999864 579999
Q ss_pred EecChhhHHHHHHHHhhh
Q 014492 405 SVGKPEHTDALMECLMHL 422 (423)
Q Consensus 405 s~~~~~~~~~l~~al~~l 422 (423)
+++...+.+++.+++++|
T Consensus 447 ~~~~~~t~e~i~~~~~~l 464 (472)
T 1ohv_A 447 RPTLVFRDHHAHLFLNIF 464 (472)
T ss_dssp CCCTTCCHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHH
Confidence 876433334455544443
No 216
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.91 E-value=3.2e-23 Score=209.34 Aligned_cols=286 Identities=13% Similarity=0.115 Sum_probs=202.2
Q ss_pred HHHHHHHHHhCCCC-CcEEEeCCHHHHHHHHHHHh----c---------CC------CC-eEEEcCCCchhhHHHHHHCC
Q 014492 133 RLRAALAKDSGLES-DHILVGCGADELIDLIMRCV----L---------DP------GD-KIVDCPPTFTMYEFDAAVNG 191 (423)
Q Consensus 133 ~lr~~ia~~~g~~~-~~i~~t~G~~~al~~~~~~l----~---------~~------gd-~Vl~~~p~y~~~~~~~~~~g 191 (423)
++++.+++++|.++ +++++|+|+++++..++.+. + .+ |+ .|+++.+.|..+...++..|
T Consensus 144 ~~~~~la~~~g~~~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g 223 (497)
T 2qma_A 144 KVVNWLCDKYDLSEKADGIFTSGGTQSNQMGLMLARDWIADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMG 223 (497)
T ss_dssp HHHHHHHHHTTCCTTCEEEEESSHHHHHHHHHHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCCCCCeEEcCCchHHHHHHHHHHHHHHHHhhcccchhhcccccccCCeEEEECCCchHHHHHHHHHcC
Confidence 34666888899865 79999999999999988863 3 12 45 78899999999998888887
Q ss_pred C---eEEEecCCCCCCCCHHHHHHHhhcC---Cce--EEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCC
Q 014492 192 A---AVVKVPRKSDFSLNVELIADAVERE---KPK--CIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGL 262 (423)
Q Consensus 192 ~---~~~~v~~~~~~~~d~~~l~~~i~~~---~~~--~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~ 262 (423)
. +++.+|.++++.+|+++|++.+.+. +++ +|++++++||||.+.+.++|.++|+. |+++++|++|..+...
T Consensus 224 ~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~a~~~~~~~ 303 (497)
T 2qma_A 224 LGEKAVMTVDANADGTMDITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYGGALIL 303 (497)
T ss_dssp SCGGGEEEECBCTTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGG
T ss_pred CCcccEEEEecCCCCcCCHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhhHHHHh
Confidence 6 8999998888899999999998642 234 88888999999999999999999998 9999999999876542
Q ss_pred Cchhhhhcc-CCcEEEEccChhhhcccCccccccccCH-HHHHHHHHhcCCC--C-----C-------------cHHHHH
Q 014492 263 ESRMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWRAKQPY--N-----V-------------SVAAEV 320 (423)
Q Consensus 263 ~~~~~~~~~-~~~~i~i~S~SK~~g~~G~R~G~i~~~~-~~~~~l~~~~~~~--~-----~-------------~~~~~~ 320 (423)
......+.. ....+++.|++|.++.+ .++|+++.++ ..++.+.. ...| . . ..+.+.
T Consensus 304 ~~~~~~~~gi~~~D~i~~s~hK~l~~p-~~~G~l~~~~~~~~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~ 381 (497)
T 2qma_A 304 SSHKSRLKGVERAHSISVDFHKLFYQT-ISCGALLVNDKSNFKFLLH-HADYLNREHDELPNLVDKSIATTKRFDALKVF 381 (497)
T ss_dssp STTGGGGTTGGGCSEEEEETTTTTCCC-SSCEEEEESCGGGGGGGCC---------------------CCSCCCTHHHHH
T ss_pred CcchHhhcCcccCCEEEEcchhccCCC-cceEEEEEeCHHHHHHhcC-CchhcCCccccCCCccccCCCCCCchhHHHHH
Confidence 221111111 12236778899987744 6899988754 33332211 0001 0 0 122334
Q ss_pred HHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCCC-CC----HHHHHHHHHhCCcEEEeCC
Q 014492 321 AACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTSG-MD----AKKLKDDLAKMGVMIRHYN 394 (423)
Q Consensus 321 a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~~-~~----~~~l~~~L~~~gI~v~~~~ 394 (423)
++...+. .+++++..++..++++++.+.|++++.+.+ .+..++++++++.+. .+ ..++.+.|.++|+.+.++.
T Consensus 382 ~~l~~lg-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~l~~~l~~~G~~~~~~~ 460 (497)
T 2qma_A 382 MTMQNVG-PKALGDMYDHLLAQTLEVADMIRTNDQFELLAEPSLSTVLFRATHETADLDELNKALRLEALTRGIAVLGET 460 (497)
T ss_dssp HHHHHTC-HHHHHHHHHHHHHHHHHHHHHHHTCTTEEECSCCSSSEEEEEECCSSSCHHHHHHHHHHHHHHHTSCBCEEE
T ss_pred HHHHHhC-HHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEcCCCceEEEEEEcCCccCHHHHHHHHHHHHHhCCCEEEEee
Confidence 4444443 456788889999999999999999866665 456677888888532 12 2456677888899886544
Q ss_pred CCCCCCeEEEEec----ChhhHHHHHHHHhh
Q 014492 395 NKELKGYVRVSVG----KPEHTDALMECLMH 421 (423)
Q Consensus 395 ~~~~~~~iRis~~----~~~~~~~l~~al~~ 421 (423)
...+.+++||+++ +.++++++.++|++
T Consensus 461 ~~~g~~~lRis~~~~~~t~edi~~~~~~l~~ 491 (497)
T 2qma_A 461 IVDGKTALKFTILNPCLTTSDFESLLSKINM 491 (497)
T ss_dssp EETTEEEEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred EECCEEEEEEEecCCCCCHHHHHHHHHHHHH
Confidence 3334579999983 45556666655554
No 217
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.91 E-value=2.6e-22 Score=203.12 Aligned_cols=307 Identities=13% Similarity=0.061 Sum_probs=211.0
Q ss_pred HHHHhc-CC-CCCCC-CCcchHHHHHHH----HHHhCCC--CCcEEEeCCHHHHHHHHHHHhcC--------------CC
Q 014492 114 REALGQ-LK-FPYIY-PDPESRRLRAAL----AKDSGLE--SDHILVGCGADELIDLIMRCVLD--------------PG 170 (423)
Q Consensus 114 ~~al~~-~~-~~~~Y-~~~g~~~lr~~i----a~~~g~~--~~~i~~t~G~~~al~~~~~~l~~--------------~g 170 (423)
.+.+.. ++ ....| ..++..++++.+ ++++|.+ ++.+++|+|+++++..++.++.+ ++
T Consensus 113 ~e~l~~~~~~~~~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~ 192 (511)
T 3vp6_A 113 GEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPK 192 (511)
T ss_dssp HHHHHHHHCCCSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCC
T ss_pred HHHHHHHhccCCCCcccCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCC
Confidence 355544 22 22455 345555666655 5556876 46899999999999888876654 56
Q ss_pred CeEEEcCCCchhhHHHHHHCCC---eEEEecCCCCCCCCHHHHHHHhhcC-----CceEEEEcCCCCCcCcCCCHHHHHH
Q 014492 171 DKIVDCPPTFTMYEFDAAVNGA---AVVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLK 242 (423)
Q Consensus 171 d~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~~~~l~~ 242 (423)
+.|+++.++|..+...++..|+ +++.+|.+.++.+|+++|++++.+. ++++|++++|+||||.+-++++|.+
T Consensus 193 ~~v~~s~~~H~s~~~~~~~~g~g~~~~~~v~~d~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ 272 (511)
T 3vp6_A 193 LVLFTSEQSHYSIKKAGAALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIAD 272 (511)
T ss_dssp EEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHH
T ss_pred eEEEECCCchHHHHHHHHHcCCCCCcEEEeecCCCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHH
Confidence 7899999999999999999998 9999998888899999999999642 1889999999999999999999999
Q ss_pred HHcC-CCEEEEccCCccccCC-Cchhhhhc-cCCcEEEEccChhhhcccCccccccccC-HHHHHHHHHhcCCC------
Q 014492 243 ILEM-PILVVLDEAYTEFSGL-ESRMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQPY------ 312 (423)
Q Consensus 243 i~~~-~~~li~Deay~~~~~~-~~~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~-~~~~~~l~~~~~~~------ 312 (423)
||+. |+++++|++|+.+... +.....+. .....+++.+++|.++.+ ..+|+++.+ ++.++........|
T Consensus 273 ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 351 (511)
T 3vp6_A 273 ICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVL-LQCSAILVKEKGILQGCNQMHASYLFQQDK 351 (511)
T ss_dssp HHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCC-SCCEEEEESSTTHHHHHHCCCCTTTCCSSC
T ss_pred HHHHcCCEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCC-cCeEEEEEeCHHHHHHHhccCCccccCccc
Confidence 9988 9999999999865431 11111111 112246677999988744 567877774 44555543221111
Q ss_pred -----------------CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecC---CCceEEEEEe-C
Q 014492 313 -----------------NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYP---SYSNFILCEV-T 371 (423)
Q Consensus 313 -----------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p---~~~~~~~~~~-~ 371 (423)
....+...++..++ ..++++++.++..++.+++.+.|++++++.+.. ...+.+.+++ |
T Consensus 352 ~~~~~~~~~~~~~~~~r~~~al~~~~al~~~-g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~~~~p~~~~v~f~~~p 430 (511)
T 3vp6_A 352 HYDVSYDTGDKAIQCGRHVDIFKFWLMWKAK-GTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIP 430 (511)
T ss_dssp SSCGGGCCGGGSSCSSCCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHSCTTEEESSSSCCSSSCEEEEECC
T ss_pred ccccccCccCCCCCCCCchHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeC
Confidence 01234444444444 246788999999999999999999987666532 3444455544 3
Q ss_pred CCCC---------------HHHHHHHHHhCCcEEEeCCC-CCCCCeEEEEec----ChhhHHHHHHHHhhh
Q 014492 372 SGMD---------------AKKLKDDLAKMGVMIRHYNN-KELKGYVRVSVG----KPEHTDALMECLMHL 422 (423)
Q Consensus 372 ~~~~---------------~~~l~~~L~~~gI~v~~~~~-~~~~~~iRis~~----~~~~~~~l~~al~~l 422 (423)
.+.+ ..++.+.|.++|+.+..... ....+++||+++ +.++++.+.++|+++
T Consensus 431 ~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~ll~~i~~~ 501 (511)
T 3vp6_A 431 QSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERL 501 (511)
T ss_dssp GGGSSCCCCHHHHHHHHHHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHH
T ss_pred ccccccccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEeCCceEEEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 2221 34688888888876554222 223458999984 455666666666654
No 218
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.91 E-value=5.6e-23 Score=207.03 Aligned_cols=305 Identities=11% Similarity=0.018 Sum_probs=205.7
Q ss_pred HHHHHHhcC-C-CCCCC-CCcchHHHHHH----HHHHhCCCC---------CcEEEeCCHHHHHHHHHHHhcCC------
Q 014492 112 EVREALGQL-K-FPYIY-PDPESRRLRAA----LAKDSGLES---------DHILVGCGADELIDLIMRCVLDP------ 169 (423)
Q Consensus 112 ~v~~al~~~-~-~~~~Y-~~~g~~~lr~~----ia~~~g~~~---------~~i~~t~G~~~al~~~~~~l~~~------ 169 (423)
.+.+++... + ....| ..++..++++. +++++|.+. ..+++|+|+++++..++.++..+
T Consensus 89 ~~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~~~ 168 (486)
T 1js3_A 89 MLADMLCGAIGCIGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQ 168 (486)
T ss_dssp HHHHHHHHHHCCCCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCcCccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhhhh
Confidence 355666553 2 22345 33444455544 566678764 36899999999998888765321
Q ss_pred ---CC--------e--EEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCc------eEEEEcCCCCC
Q 014492 170 ---GD--------K--IVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKP------KCIFLTSPNNP 230 (423)
Q Consensus 170 ---gd--------~--Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~------~~i~l~~p~NP 230 (423)
|| . |+++.++|..+...++..|++++.+|.++++.+|+++|++++.+ ++ .+|++++|+||
T Consensus 169 ~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~~v~~v~~d~~~~~d~~~L~~~i~~-~~~~g~~p~~vv~~~~~n~ 247 (486)
T 1js3_A 169 AASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAIPSDGKFAMRASALQEALER-DKAAGLIPFFVVATLGTTS 247 (486)
T ss_dssp HHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHH-HHHTTCEEEEEEEEBSCTT
T ss_pred ccCccchhcccCCCEEEEECCCCcHHHHHHHHhCCCceEEeecCCCCCCCHHHHHHHHHH-HHhCCCCceEEEEeCCCCC
Confidence 32 3 77899999999999999999999999888889999999999963 33 48888999999
Q ss_pred cCcCCCHHHHHHHHcC-CCEEEEccCCccccCC-Cchh---hhhccCCcEEEEccChhhhcccCccccccccCHH-H-HH
Q 014492 231 DGSIINDEDLLKILEM-PILVVLDEAYTEFSGL-ESRM---EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-I-IE 303 (423)
Q Consensus 231 tG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~-~~~~---~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~-~-~~ 303 (423)
||.+-+.++|.++|+. |+++++|++|+.+... +... ..+... ..++.+++|.++.+ +++|+++.++. . .+
T Consensus 248 tG~~~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~a--dsi~~~~hK~~~~p-~~~G~l~~~~~~~l~~ 324 (486)
T 1js3_A 248 CCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFA--DSFNFNPHKWLLVN-FDCSAMWVKRRTDLTG 324 (486)
T ss_dssp TCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGC--SEEEECHHHHSSCC-SSCEEEEESCHHHHHG
T ss_pred CCCCCCHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCcccc--CeeEEchhhhcCCC-cceEEEEEeCHHHHHH
Confidence 9999999999999987 9999999999875421 1111 111112 24557889987754 88999998643 2 23
Q ss_pred HHH-------HhcC-----C----C------CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeec-C
Q 014492 304 YLW-------RAKQ-----P----Y------NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPY-P 360 (423)
Q Consensus 304 ~l~-------~~~~-----~----~------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p 360 (423)
.+. .... . + ....+.+.++...+. .+++++..++..++++++.+.|++++++.+. +
T Consensus 325 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 403 (486)
T 1js3_A 325 AFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYG-VKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAE 403 (486)
T ss_dssp GGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCTTEEECSC
T ss_pred HhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCC
Confidence 221 0000 0 0 123455555555542 3568888999999999999999998766653 3
Q ss_pred CCceEEEEEeCCC-CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC----hhhHHHHHHHHhh
Q 014492 361 SYSNFILCEVTSG-MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK----PEHTDALMECLMH 421 (423)
Q Consensus 361 ~~~~~~~~~~~~~-~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~----~~~~~~l~~al~~ 421 (423)
...+++.+++++. ....++.+.|.++|+.+..+......+++|++++. .++++++.+.|++
T Consensus 404 ~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~ 469 (486)
T 1js3_A 404 VTLGLVCFRLKGSDGLNEALLERINSARKIHLVPCRLRGQFVLRFAICSRKVESGHVRLAWEHIRG 469 (486)
T ss_dssp CCSSEEEEEESSCHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred CceeEEEEEecChHHHHHHHHHHHHhcCCEEEEEEEECCEEEEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 4556666677521 12477888888778654332222346799999753 3345555555543
No 219
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.90 E-value=9.8e-23 Score=212.39 Aligned_cols=288 Identities=12% Similarity=0.109 Sum_probs=200.5
Q ss_pred CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHH-HHHCCCeEEEecCCC-CCC
Q 014492 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD-AAVNGAAVVKVPRKS-DFS 204 (423)
Q Consensus 127 ~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~-~~~~g~~~~~v~~~~-~~~ 204 (423)
++....++++.+|+++|.+ ..+++++|+++++..++.+++++||.|+++.|+|.++... ++..|++++.++.+. +++
T Consensus 171 ~~~~i~e~e~~lA~~~gae-~~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~~~~l~Ga~~v~v~~~~~~~~ 249 (730)
T 1c4k_A 171 HEGPAVAAEKHAARVYNAD-KTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAMAGGRPVYLQTNRNPYG 249 (730)
T ss_dssp TBTHHHHHHHHHHHHTTCS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEEEEECEEECTTC
T ss_pred ChHHHHHHHHHHHHHHCCC-cEEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHCCCEEEEEeCCccccC
Confidence 3344689999999999976 4588999999999999999999999999999999988777 788999999887532 333
Q ss_pred ----CCHHHH-----HHHhhcCC-----c----eEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccc-cCCCc
Q 014492 205 ----LNVELI-----ADAVEREK-----P----KCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEF-SGLES 264 (423)
Q Consensus 205 ----~d~~~l-----~~~i~~~~-----~----~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~-~~~~~ 264 (423)
+|+++| ++++.+.+ + |++++++| ||+|.+.+.+++.++|+. +++|++||+|..+ .+.+.
T Consensus 250 i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~dl~~I~~la~~~g~~livDeAh~~~~~f~~~ 328 (730)
T 1c4k_A 250 FIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQFIPM 328 (730)
T ss_dssp CEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEECHHHHHHHHGGGBSEEEEECTTCCGGGSSGG
T ss_pred ccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecCHHHHHHHHHHcCCeEEEEcccccccccCcc
Confidence 688888 88886421 4 89999999 589999999999999998 9999999999753 23221
Q ss_pred -----hhhh--hc-cCCcEEEEccChhhhcccCcccc-ccccC------------HHHHHHHHHhcCCCCCcHHHHHHHH
Q 014492 265 -----RMEW--VK-KHDNLIVLRTFSKRAGLAGLRVG-YGAFP------------LSIIEYLWRAKQPYNVSVAAEVAAC 323 (423)
Q Consensus 265 -----~~~~--~~-~~~~~i~i~S~SK~~g~~G~R~G-~i~~~------------~~~~~~l~~~~~~~~~~~~~~~a~~ 323 (423)
.... .. +.++++++.|+||.+ +|.+.| +++.+ ...+..........+++.....+..
T Consensus 329 ~~g~~~l~~~~~g~D~~~~iv~~S~hK~L--~g~~~gg~I~v~~~~l~g~~~~i~~~~~~~~~~~~~stsp~~~~iaal~ 406 (730)
T 1c4k_A 329 MRNSSPLLIDDLGPEDPGIIVVQSVHKQQ--AGFSQTSQIHKKDSHIKGQLRYCDHKHFNNSFNLFMSTSPFYPMYAALD 406 (730)
T ss_dssp GGGGCTTSCCCCCTTSCEEEEEECHHHHS--SCCTTCEEEEEECGGGTTSTTCCCHHHHHHHHHHHSCSSCCHHHHHHHH
T ss_pred cCCcCcccccccCCCCCCEEEEECCCCCC--CCCCCEEEEEecchhhcCcccccCHHHHHHHHHHhCCCCCcHHHHHHHH
Confidence 1111 01 234679999999974 576655 44221 1122222222334455655544444
Q ss_pred HHhCC--hHHHHHHHHHHHHHHHHHHHHHcc-CCCCeecCC--------------------------------------C
Q 014492 324 AALQN--PIYLEKVKEALIKERERLFKLLKD-VPFLNPYPS--------------------------------------Y 362 (423)
Q Consensus 324 ~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~p~--------------------------------------~ 362 (423)
.++.. .+...+..+++.++.+++++.|++ ++++.+..+ .
T Consensus 407 aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 486 (730)
T 1c4k_A 407 VNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKGAKWHAYEGYGD 486 (730)
T ss_dssp HHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTTCTTTCCTTCCT
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEccccccccccccccccccccccchhhccCccchhccccccCC
Confidence 44331 112345566677777888888877 555554221 1
Q ss_pred c-eE-----EEEEeCC-----------CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492 363 S-NF-----ILCEVTS-----------GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL 422 (423)
Q Consensus 363 ~-~~-----~~~~~~~-----------~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l 422 (423)
+ ++ +.+..|+ +.++.++.+.|.++||.+...+ .+.+|++++ +.++.+.|.++|+++
T Consensus 487 ~~~~idp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L~e~GI~v~~~~----~~~ir~~~s~g~t~e~i~~Ll~aL~~i 562 (730)
T 1c4k_A 487 NQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLRDHGIIPEKSD----LNSILFLMTPAETPAKMNNLITQLLQL 562 (730)
T ss_dssp TCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHHHHTTCCCSEEC----SSEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred cccccCCeEEEEEeCCcccccccccccCCCHHHHHHHHHHCCcEEEECC----CCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 1 22 4566642 4678999999998999887654 578999876 456677788877664
No 220
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.84 E-value=6.8e-26 Score=225.26 Aligned_cols=293 Identities=14% Similarity=0.071 Sum_probs=205.0
Q ss_pred CCCCCCeeEcCCCCCC--CC-CCHHHHHHHhc-CCC--CCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHH
Q 014492 91 GRKPEDIVKIDANENP--YG-PPPEVREALGQ-LKF--PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (423)
Q Consensus 91 ~~~~~~~i~l~~~~~~--~~-~~~~v~~al~~-~~~--~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~ 164 (423)
+.+++.+|||..+..+ ++ .+|+|.+|+.+ +.. ...|+++...+|.+.|+++++ ..+.+++++|+++++..+++
T Consensus 96 D~dG~~yiD~~~~~~~~~lGh~~p~V~~Av~~q~~~~~~~~~~~~~~~~Lae~L~~~~p-~~~~v~~~nSGseA~~~Aik 174 (465)
T 2yky_A 96 DVDGHAYVNFLGEYTAGLFGHSHPVIRAAVERALAVGLNLSTQTENEALFAEAVCDRFP-SIDLVRFTNSGTEANLMALA 174 (465)
Confidence 4567889999887653 44 46889888876 322 245677777899999999995 46789999999999999998
Q ss_pred Hhc--CCCCeEEEcCCCchhhHHHHH----HCCC--eEEEecCCCCCCCCHHHHHHHhhc--CCceEEEEcCCCCCcCcC
Q 014492 165 CVL--DPGDKIVDCPPTFTMYEFDAA----VNGA--AVVKVPRKSDFSLNVELIADAVER--EKPKCIFLTSPNNPDGSI 234 (423)
Q Consensus 165 ~l~--~~gd~Vl~~~p~y~~~~~~~~----~~g~--~~~~v~~~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~ 234 (423)
... ..++.|++..++|+.+...+. ..|+ .++.+|. .|++++++.+++ .++++|+++..++++|.+
T Consensus 175 ~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~~-----~d~~~l~~~l~~~~~~~aavi~epv~~~~G~~ 249 (465)
T 2yky_A 175 TATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGVY-----NDVEGTADLLKRHGHDCAAILVEPMLGAGGCV 249 (465)
Confidence 542 345899999999976554433 1233 2333331 378899988864 578888887656679987
Q ss_pred CC----HHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHH--
Q 014492 235 IN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR-- 307 (423)
Q Consensus 235 ~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~-- 307 (423)
.+ .+++.++|+. |+++|+||+|. |..+. ....+..+...-+.||||.+| .|+|+||+++++++++.+..
T Consensus 250 ~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~g~--~~a~~~~gv~pDi~t~sK~lg-~G~piG~v~~~~~i~~~l~~~~ 325 (465)
T 2yky_A 250 PAERAFLDLLRAEASRCGALLIFDEVMT-SRLSG--GGAQEMLGISADLTTLGKYIG-GGMSFGAFGGRRDLMERFDPAR 325 (465)
Confidence 76 5556666665 99999999999 74321 111222222334568999999 59999999999999988876
Q ss_pred -----hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccC----CCCeecCCCceEEEEEeCC-C----
Q 014492 308 -----AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDV----PFLNPYPSYSNFILCEVTS-G---- 373 (423)
Q Consensus 308 -----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~p~~~~~~~~~~~~-~---- 373 (423)
....++.|++++.++.++|+..+- +...++++++.+++.+.|+++ +.....++.|.++++.+++ .
T Consensus 326 ~g~~~~~~T~~~npla~aAa~aaL~~l~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~g~G~~~~i~~~~~~~~~~ 404 (465)
T 2yky_A 326 DGAFAHAGTFNNNILTMSAGHAALTQIYT-RQAASDLSASGDRFRANLNRIAVENQAPLQFTGLGSLGTIHFSRAPIRSA 404 (465)
Confidence 123467889999988888864211 235556666666666666553 3222346778899988763 1
Q ss_pred --------CCHHHHHHHHHhCCcEEEeCC
Q 014492 374 --------MDAKKLKDDLAKMGVMIRHYN 394 (423)
Q Consensus 374 --------~~~~~l~~~L~~~gI~v~~~~ 394 (423)
.....+++.|+++||++.++.
T Consensus 405 ~~~~~~d~~~~~~~~~~ll~~GV~v~p~~ 433 (465)
T 2yky_A 405 GDVRAADQQLKELFFFHMLRKGIYLAPRG 433 (465)
Confidence 114568888889999999876
No 221
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.90 E-value=1.1e-22 Score=206.30 Aligned_cols=288 Identities=16% Similarity=0.079 Sum_probs=203.7
Q ss_pred HHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhc-------C-CCC------eEEEcCCCchhhHHHHHHCCC---eE
Q 014492 132 RRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL-------D-PGD------KIVDCPPTFTMYEFDAAVNGA---AV 194 (423)
Q Consensus 132 ~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~-------~-~gd------~Vl~~~p~y~~~~~~~~~~g~---~~ 194 (423)
.++++.+++++|.+++++++|+|+++++..++.++. + +|+ .|+++.+.|..+...++..|. ++
T Consensus 151 ~~~~~~la~l~g~~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~~~~~~~g~g~~~v 230 (515)
T 2jis_A 151 EEVLRKLRALVGWSSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKGAAFLGLGTDSV 230 (515)
T ss_dssp HHHHHHHHHHHTCSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGE
T ss_pred HHHHHHHHHHhCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHHHHHHHHcCCCCCcE
Confidence 457788999999988899999999999988888663 2 575 789999999999999998888 89
Q ss_pred EEecCCCCCCCCHHHHHHHhhcC-----CceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCc-hhh
Q 014492 195 VKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLES-RME 267 (423)
Q Consensus 195 ~~v~~~~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~-~~~ 267 (423)
+.+|.++++.+|+++|++++.+. ++++|++++|+||||.+.+.++|.++|+. |+++++|++|+.+..... ...
T Consensus 231 ~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD~a~~~~~~~~~~~~~ 310 (515)
T 2jis_A 231 RVVKADERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRH 310 (515)
T ss_dssp EEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGG
T ss_pred EEEecCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCeEEEehhhhhHHHhChhhHh
Confidence 99998778899999999999642 48999999999999999999999999998 999999999987664221 111
Q ss_pred hhcc-CCcEEEEccChhhhcccCccccccccCHH--HHHHHHHhcCC-----------------C------CCcHHHHHH
Q 014492 268 WVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLS--IIEYLWRAKQP-----------------Y------NVSVAAEVA 321 (423)
Q Consensus 268 ~~~~-~~~~i~i~S~SK~~g~~G~R~G~i~~~~~--~~~~l~~~~~~-----------------~------~~~~~~~~a 321 (423)
.+.. .+..+++.|++|.++ .+.++|+++++++ ++++......+ + ....+.+.+
T Consensus 311 ~~~g~~~aD~v~~s~hK~l~-~p~g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~al~~~~ 389 (515)
T 2jis_A 311 LLDGIQRADSVAWNPHKLLA-AGLQCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDKVVQCGRRVDCLKLWL 389 (515)
T ss_dssp GGTTGGGCSEEEECTTSTTC-CCSCCEEEEESCCSCHHHHHHCC---------CCSCGGGCCGGGCSCSSCCCCHHHHHH
T ss_pred hcCCCccCCEEEECcccccC-CCCCeeEEEEeChHHHHHHHhcCCchhccCCcccccccCCCCCCCCCCCCcccHHHHHH
Confidence 1111 133478889999876 3457899998765 65542211000 0 012344455
Q ss_pred HHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeec--CCCceEEEEEeCCC-------CC-H-------HHHHHHHH
Q 014492 322 ACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPY--PSYSNFILCEVTSG-------MD-A-------KKLKDDLA 384 (423)
Q Consensus 322 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~--p~~~~~~~~~~~~~-------~~-~-------~~l~~~L~ 384 (423)
+..++. .+.+++..++..++++++.+.|++++++.+. |..+.+.+...|++ .+ . ..+.+.|.
T Consensus 390 ~l~~lg-~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 468 (515)
T 2jis_A 390 MWKAQG-DQGLERRIDQAFVLARYLVEEMKKREGFELVMEPEFVNVCFWFVPPSLRGKQESPDYHERLSKVAPVLKERMV 468 (515)
T ss_dssp HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSCCSSSEEEEEECCGGGTTCTTSTTHHHHHHTHHHHHHHHHH
T ss_pred HHHHHh-HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCeeEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHH
Confidence 555553 3557888889999999999999998766653 33344444333421 11 1 12566777
Q ss_pred hCCcEEEeCCC-CCCCCeEEEEec----ChhhHHHHHHHHhh
Q 014492 385 KMGVMIRHYNN-KELKGYVRVSVG----KPEHTDALMECLMH 421 (423)
Q Consensus 385 ~~gI~v~~~~~-~~~~~~iRis~~----~~~~~~~l~~al~~ 421 (423)
+.|+.+..... .+..+++||+++ +.++++++.++|++
T Consensus 469 ~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edid~~~~~l~~ 510 (515)
T 2jis_A 469 KEGSMMIGYQPHGTRGNFFRVVVANSALTCADMDFLLNELER 510 (515)
T ss_dssp HHTSCEEEEEEETTEEEEEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred hcCCEEEEEEEECCceEEEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 88876543221 223469999993 55666666666654
No 222
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.90 E-value=2.4e-23 Score=205.75 Aligned_cols=266 Identities=15% Similarity=0.129 Sum_probs=193.4
Q ss_pred HHHHHHHhcCC---------CCCCCCCcchHHHHHHHHHHhCCCCC--cEEEeCCHHHHHHHHHHHhcCCCCeEEEcC-C
Q 014492 111 PEVREALGQLK---------FPYIYPDPESRRLRAALAKDSGLESD--HILVGCGADELIDLIMRCVLDPGDKIVDCP-P 178 (423)
Q Consensus 111 ~~v~~al~~~~---------~~~~Y~~~g~~~lr~~ia~~~g~~~~--~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~-p 178 (423)
+++++++.+.. .++.|++.+.+++++.+++++|.+.. +++++ |+++++..++.+++++||+|+++. |
T Consensus 38 ~~vl~A~~~~~~~~~~~~~~~g~~y~~~~~~~l~~~la~~~g~~~~~~~i~~~-sGt~Ai~~al~al~~~Gd~Vl~~~~~ 116 (431)
T 3ht4_A 38 FRVLESFGKHKISDSHFIPTTGYGYDDIGRDTLEKVYADVFGAEAGLVRPQII-SGTHAISTALFGILRPGDELLYITGK 116 (431)
T ss_dssp HHHHHHHHHTTCCGGGSCCCCTTCCSCHHHHHHHHHHHHHTTCSEECCBTTSC-SHHHHHHHHHHTTCCTTCEEEECSSS
T ss_pred HHHHHHHHHhchhhhhcCCCCCCCCChhhHHHHHHHHHHHhCCCcccccceee-CHHHHHHHHHHHhCCCCCEEEEeCCC
Confidence 56667765421 12556777788999999999997543 22355 567999999999999999999998 9
Q ss_pred CchhhHHHH----------HHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEc-CCCCCcCcCCCHHHHHHHHc--
Q 014492 179 TFTMYEFDA----------AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNNPDGSIINDEDLLKILE-- 245 (423)
Q Consensus 179 ~y~~~~~~~----------~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~-~p~NPtG~~~~~~~l~~i~~-- 245 (423)
.|..+...+ +..|++++.++.+.++.+|+++++++++ +++++|+++ +||||+|...+.+++++|++
T Consensus 117 ~y~~~~~~~~l~g~~~~~~~~~G~~~~~v~~~~~~~~d~e~l~~~l~-~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la 195 (431)
T 3ht4_A 117 PYDTLEEIVGVRGKGVGSFKEYNIGYNAVPLTEGGLVDFEAVAAAIH-SNTKMIGIQRSKGYATRPSFTISQIKEMIAFV 195 (431)
T ss_dssp CCTTHHHHTTSSSCSSSCSGGGTCEEEECCBCTTSSBCHHHHHHHCC-TTEEEEEEECSCTTSSSCCCCHHHHHHHHHHH
T ss_pred CchhHHHHHhhcccccchHHHcCCEEEEeCCCCCCCcCHHHHHhhcC-CCCeEEEEECCCCCCCCCcCCHHHHHHHHHHH
Confidence 999887655 3479999999987778899999999997 689999999 69999999998888777654
Q ss_pred ----CCCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcc-cCccccccccCHHHHHHHHHhcCC--C----CC
Q 014492 246 ----MPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGL-AGLRVGYGAFPLSIIEYLWRAKQP--Y----NV 314 (423)
Q Consensus 246 ----~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~-~G~R~G~i~~~~~~~~~l~~~~~~--~----~~ 314 (423)
.|+++|+||+|..+........ .+..++++|+||.+|. .+...||+++++++++.+...... + ..
T Consensus 196 ~~~~~~~~livDea~~~~~~~~~~~~----~g~Di~~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~~~~ 271 (431)
T 3ht4_A 196 KEIKPDVVVFVDNCYGEFIEEQEPCH----VGADLMAGSLIKNPGGGIVKTGGYIVGKEQYVEACAYRLTSPGIGAEAGA 271 (431)
T ss_dssp HHHCTTCEEEEECTTCTTSSSCCGGG----TTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTTTTSCSC
T ss_pred HhhCCCCEEEEeCCChhhccCCCccc----cCCeEEEcCccccCCCCCCCceEEEEecHHHHHHHHHHhccCCcccccCc
Confidence 3899999999998875333222 2335899999998653 123349999999999998774432 1 11
Q ss_pred cHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCc-----eEEEEEeCCCCCHHHHHHHHHhC
Q 014492 315 SVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYS-----NFILCEVTSGMDAKKLKDDLAKM 386 (423)
Q Consensus 315 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~-----~~~~~~~~~~~~~~~l~~~L~~~ 386 (423)
+.....++...+ .....+.++..++.+++.+.|+++++ .+.|... ..+.+.+++.....++++.|.+.
T Consensus 272 ~~~~~~~~~~~l---~~~~~~~~~~~~~a~~l~~~L~~~g~-~v~p~~~~~~~~li~~i~l~~~~~~~~~~~~l~~~ 344 (431)
T 3ht4_A 272 SLYSLQEMYQGF---FLAPHVAGQALKGAIFTAAFLEKLGM-NTSPAWNAPRTDLIQSVQFDDKDRMIAFCQAIQYA 344 (431)
T ss_dssp CCSCSHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHTC-CEESCTTSCCSSSCCEEECCCHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHhHh---hhHHHHHHHHHHHHHHHHHHHHhCcC-EecCCCCCCCccEEEEEEeCCHHHHHHHHHHHHhc
Confidence 111122222222 33456677788889999999988875 3344433 36777886444566788888865
No 223
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.88 E-value=1.8e-21 Score=204.62 Aligned_cols=287 Identities=13% Similarity=0.078 Sum_probs=196.4
Q ss_pred CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC-CCC-
Q 014492 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFS- 204 (423)
Q Consensus 127 ~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~- 204 (423)
+.....++++.+++++|.+ +.+++++|+++++..++.+++++||.|+++.|+|.++...++..|++++.++.+. +++
T Consensus 203 ~~g~v~~~ee~la~l~G~d-~~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~~~~~G~~~v~v~~~~~~~g~ 281 (755)
T 2vyc_A 203 HTGAFGESEKYAARVFGAD-RSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRNRYGI 281 (755)
T ss_dssp TCHHHHHHHHHHHHHHTCS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHHCCEEEEECCCBCTTSC
T ss_pred CccHHHHHHHHHHHHhCCC-ceEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCCCCcccc
Confidence 3344678999999999975 5688999999999999999999999999999999988888888999999998643 233
Q ss_pred ---C-----CHHHHHHHhhcC-Cc--------eEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCcccc-CCC--
Q 014492 205 ---L-----NVELIADAVERE-KP--------KCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLE-- 263 (423)
Q Consensus 205 ---~-----d~~~l~~~i~~~-~~--------~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~-~~~-- 263 (423)
+ |++++++++++. ++ ++++++|| ||+|.+.+.+++.++|+. ++++++||+|..+. +.+
T Consensus 282 ~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~dl~~I~~ia~~~~~~livDeA~~~~~~~~~~~ 360 (755)
T 2vyc_A 282 IGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIY 360 (755)
T ss_dssp BCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEECHHHHHHHHTTTCSEEEEECTTCTTGGGCGGG
T ss_pred ccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecCHHHHHHHHHHcCCEEEEECcCchhcccCccc
Confidence 4 999999999642 34 48999998 799999999999999998 99999999997532 221
Q ss_pred ---chhhh--hc-cCCcEEEEccChhhhcccCcc-ccccccCHH-------HHHHHHHhcCCCCCcHHHHHHHHHHhC--
Q 014492 264 ---SRMEW--VK-KHDNLIVLRTFSKRAGLAGLR-VGYGAFPLS-------IIEYLWRAKQPYNVSVAAEVAACAALQ-- 327 (423)
Q Consensus 264 ---~~~~~--~~-~~~~~i~i~S~SK~~g~~G~R-~G~i~~~~~-------~~~~l~~~~~~~~~~~~~~~a~~~~l~-- 327 (423)
..... .+ ..++++++.|+||.+ +|.+ .|+++.+++ ............+++.+...+...+++
T Consensus 361 ~~~~~~~g~~aD~~~~~~iv~~S~hK~L--~g~~~g~~i~~~~~~~~i~~~~~~~~~~~~~s~sp~~~~iaal~aA~~~l 438 (755)
T 2vyc_A 361 ADHYAMRGEPGDHNGPTVFATHSTHKLL--NALSQASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASNDVAVSMM 438 (755)
T ss_dssp TTSSSSCSCCCCCSSBEEEEEEETTTSS--SCCTTCEEEEEECCBTCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHH
T ss_pred CCcchhcCCcCCccCCCeEEEECccccc--cCcCCeeeeeecCcccccCHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 11111 12 235678999999964 5776 456655332 222222223334566655444444433
Q ss_pred -ChHHHHHHHHHHHHHHHHHHHHHccCCC---------CeecCC------------------------------------
Q 014492 328 -NPIYLEKVKEALIKERERLFKLLKDVPF---------LNPYPS------------------------------------ 361 (423)
Q Consensus 328 -~~~~~~~~~~~~~~~~~~l~~~L~~~~~---------~~~~p~------------------------------------ 361 (423)
... .++..+++.++.+++++.|+++++ +.++..
T Consensus 439 ~~~g-g~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (755)
T 2vyc_A 439 DGNS-GLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGES 517 (755)
T ss_dssp STHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEESSCSEEECTTTCCEEEGGGSCHHHHHHCGGGTBCCTTCT
T ss_pred Hhhh-HHHHHHHHHHHHHHHHHHHHhccccccccccceeeccCchhccccccccccccccccchhccchhhhhccCcccc
Confidence 321 233344444444445554443321 221100
Q ss_pred --------Cc------eEEEEEeCC----------CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHH
Q 014492 362 --------YS------NFILCEVTS----------GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDA 414 (423)
Q Consensus 362 --------~~------~~~~~~~~~----------~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~ 414 (423)
.+ .-+.+.+++ |.++..+.+.|.++||.+...+ .+.+|+.++ +.++.+.
T Consensus 518 ~h~~~~~~~~~~~~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~~~L~~~gI~~e~~~----~~~v~~~~~~g~t~~~~~~ 593 (755)
T 2vyc_A 518 WHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRTT----DFQIMFLFSMGVTRGKWGT 593 (755)
T ss_dssp TTCCTTCCTTSEEECTTEEEEECSCBCTTSSBCSSCCCHHHHHHHHHTTTCCCSEEC----SSEEEEECCTTCCTTTTHH
T ss_pred cccccccCCCccccCCeEEEEEcCCCCCCCCccccCCcHHHHHHHHHHCCCEEeecC----CCeEEEEECCCCCHHHHHH
Confidence 11 124555652 5677899999999999886543 578999875 5666788
Q ss_pred HHHHHhhh
Q 014492 415 LMECLMHL 422 (423)
Q Consensus 415 l~~al~~l 422 (423)
|.++|+++
T Consensus 594 l~~al~~~ 601 (755)
T 2vyc_A 594 LVNTLCSF 601 (755)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88888765
No 224
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.88 E-value=8.8e-22 Score=190.32 Aligned_cols=302 Identities=10% Similarity=0.031 Sum_probs=211.5
Q ss_pred CCCCCCCHHHHHHHhcCCC-----C-------CCCCCc--chHHHHHHHHHHhCCCC-CcEEE-eCCHHHHHHHHHHHhc
Q 014492 104 ENPYGPPPEVREALGQLKF-----P-------YIYPDP--ESRRLRAALAKDSGLES-DHILV-GCGADELIDLIMRCVL 167 (423)
Q Consensus 104 ~~~~~~~~~v~~al~~~~~-----~-------~~Y~~~--g~~~lr~~ia~~~g~~~-~~i~~-t~G~~~al~~~~~~l~ 167 (423)
....+.|++|++++.+.-. + ++.+.. -.++.|+.+++++|+++ ++|++ |.|+++++++++..++
T Consensus 19 at~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~a~~~l~ 98 (377)
T 3e77_A 19 YFQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNLI 98 (377)
T ss_dssp ECSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHG
T ss_pred cccCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEcCchHHHHHHHHHhcc
Confidence 4556778999999987311 0 110111 14688999999999865 57888 5899999999999998
Q ss_pred CC--CCeEEEcCCCchh--hHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHH
Q 014492 168 DP--GDKIVDCPPTFTM--YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243 (423)
Q Consensus 168 ~~--gd~Vl~~~p~y~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i 243 (423)
.+ ||+|++..-++.. +...++..|..++.++.+.++..+++.++..++ +++++|.+++..|.||+++|. |
T Consensus 99 ~~~~Gd~v~~~~~g~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~~~~~~~i~-~~t~lV~~~h~et~tG~~~pi-----i 172 (377)
T 3e77_A 99 GLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVHPKLGSYTKIPDPSTWNLN-PDASYVYYCANETVHGVEFDF-----I 172 (377)
T ss_dssp GGSTTCEEEECCCSHHHHHHHHHHTTTSEEEECSCCCSSSCSCCCGGGCCCC-TTCSCEEEESEETTTTEECSS-----C
T ss_pred CCCCCCeEEEEECCHHHHHHHHHHHHhCCceEEeccCCCcCCCCChHHhccC-CCccEEEEeCccCchheEchh-----h
Confidence 65 8998776655543 334456678888877876666777877776675 789999999999999999998 4
Q ss_pred HcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHH-------------H-HHh
Q 014492 244 LEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY-------------L-WRA 308 (423)
Q Consensus 244 ~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~-------------l-~~~ 308 (423)
++. |+++++|.+++.... +- .+...+ +++.|..|.+|.+| +|+++.+++++++ . .+.
T Consensus 173 ~~~~~~~~~vD~~q~~g~~-~i---d~~~~~--~~~~s~~K~~gp~G--~g~l~~~~~~l~~~~~~~p~~~~~~~~~~~~ 244 (377)
T 3e77_A 173 PDVKGAVLVCDMSSNFLSK-PV---DVSKFG--VIFAGAQKNVGSAG--VTVVIVRDDLLGFALRECPSVLEYKVQAGNS 244 (377)
T ss_dssp CCCTTCCEEEECTTTTTSS-CC---CGGGCS--EEEEEGGGTTSCTT--CEEEEEETTSCSCCCTTSCGGGCHHHHHTTT
T ss_pred hccCCCEEEEEcccccCCC-CC---chhhcC--EEEEecccccCCCc--cEEEEEcHHHHhhccCCCCchhhHHHHhhcC
Confidence 555 999999999984432 11 122333 46678899998778 5777765443211 1 111
Q ss_pred cCCCCCcHHHHHHHHHHhCC--hH-HHHHHHHHHHHHHHHHHHHHccCCCCeecC-----CCceEEEEEeCCCCCH----
Q 014492 309 KQPYNVSVAAEVAACAALQN--PI-YLEKVKEALIKERERLFKLLKDVPFLNPYP-----SYSNFILCEVTSGMDA---- 376 (423)
Q Consensus 309 ~~~~~~~~~~~~a~~~~l~~--~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p-----~~~~~~~~~~~~~~~~---- 376 (423)
..+++++.....++..+|+. .. .++.+.++.+++.+++++.|++++++.+.+ ..+..+.+.+++ .+.
T Consensus 245 ~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~-~~~~~~~ 323 (377)
T 3e77_A 245 SLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGN-AKGDDAL 323 (377)
T ss_dssp TCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEEESS-TTCCHHH
T ss_pred CCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEEcCC-CCCchhH
Confidence 23456777777777777753 22 478889999999999999999987665332 123457778873 221
Q ss_pred -HHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492 377 -KKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL 422 (423)
Q Consensus 377 -~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l 422 (423)
..+.+.|.++||.++++.. ..+.+|+|+. +.++++.|.++|+++
T Consensus 324 ~~~~l~~l~~~Gi~~~~g~~--~~g~iRiS~~~~~t~edId~l~~al~~~ 371 (377)
T 3e77_A 324 EKRFLDKALELNMLSLKGHR--SVGGIRASLYNAVTIEDVQKLAAFMKKF 371 (377)
T ss_dssp HHHHHHHHHHTTEESCBCCT--TTCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCcEEeCCCC--cCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 4577778889999887642 2457999986 577788888888764
No 225
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.87 E-value=4.6e-21 Score=192.67 Aligned_cols=295 Identities=11% Similarity=0.034 Sum_probs=203.7
Q ss_pred CCC-CCcchHHHHHHHHHH----hCCCCC----------cEEEeCCHHHHHHHHHHHhcC-------------------C
Q 014492 124 YIY-PDPESRRLRAALAKD----SGLESD----------HILVGCGADELIDLIMRCVLD-------------------P 169 (423)
Q Consensus 124 ~~Y-~~~g~~~lr~~ia~~----~g~~~~----------~i~~t~G~~~al~~~~~~l~~-------------------~ 169 (423)
..| ..++..++++.+++| +|.+.+ ..++|+|+++++..++.+..+ +
T Consensus 108 ~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~ 187 (481)
T 4e1o_A 108 FTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNA 187 (481)
T ss_dssp SSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHT
T ss_pred CCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccC
Confidence 445 455667777766554 577542 578999999998877765532 5
Q ss_pred CCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcC-----CceEEEEcCCCCCcCcCCCHHHHHHHH
Q 014492 170 GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKIL 244 (423)
Q Consensus 170 gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~~~~l~~i~ 244 (423)
++.|+++.++|..+...++..|++++.+|.++++.+|+++|++++++. .+.+|+++.++|+||.+-++++|.++|
T Consensus 188 ~~~v~~s~~~H~s~~~~~~~~g~~~~~v~~~~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l~~I~~la 267 (481)
T 4e1o_A 188 RLVAYASDQAHSSVEKAGLISLVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPIC 267 (481)
T ss_dssp TEEEEEETTSCHHHHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHH
T ss_pred CeEEEEcCcchHHHHHHHHhCCCceEEEEcCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCHHHHHHHH
Confidence 678999999999999999999999999998888899999999999642 167788889999999999999999999
Q ss_pred cC-CCEEEEccCCccccC-CCchhhhhc-cCCcEEEEccChhhhcccCccccccccC-HHHHHHHHHhcCCC--------
Q 014492 245 EM-PILVVLDEAYTEFSG-LESRMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQPY-------- 312 (423)
Q Consensus 245 ~~-~~~li~Deay~~~~~-~~~~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~-~~~~~~l~~~~~~~-------- 312 (423)
+. |+++++|++|..+.. .+....... ......+..+++|.++.| ..+|+++.. ++.+.........|
T Consensus 268 ~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~ 346 (481)
T 4e1o_A 268 AREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVH-FDCTGFWVKDKYKLQQTFSVNPIYLRHANSGV 346 (481)
T ss_dssp HHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCC-SSCEEEEESBHHHHHTTTCCCCGGGCCTTTTT
T ss_pred HHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCC-CceEEEEEeCHHHHHHHhcCCchhccCcccCC
Confidence 98 999999999986542 111111111 111235667899987754 446666654 44433211111000
Q ss_pred -------------CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCC-CCCHH
Q 014492 313 -------------NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS-GMDAK 377 (423)
Q Consensus 313 -------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~-~~~~~ 377 (423)
....+.+.++..++. .+.++++.++..++++++.+.|++++++.+ .+...+++++++++ .....
T Consensus 347 ~~~~~~~~~~~~r~~~~l~~~~al~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~ 425 (481)
T 4e1o_A 347 ATDFMHWQIPLSRRFRSVKLWFVIRSFG-VKNLQAHVRHGTEMAKYFESLVRNDPSFEIPAKRHLGLVVFRLKGPNSLTE 425 (481)
T ss_dssp SCCGGGGSSSSCCCCTHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTCTTEECCSCCCSSEEEEEESSCHHHHH
T ss_pred CCCcccccccCCCCccHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEeCCchHHHH
Confidence 012444555555542 356788899999999999999999876665 45667888888863 22357
Q ss_pred HHHHHHHhCCc-EEEeCCCCCCCCeEEEEecC----hhhHHHHHHHHhh
Q 014492 378 KLKDDLAKMGV-MIRHYNNKELKGYVRVSVGK----PEHTDALMECLMH 421 (423)
Q Consensus 378 ~l~~~L~~~gI-~v~~~~~~~~~~~iRis~~~----~~~~~~l~~al~~ 421 (423)
++.+.|.++|+ .+.+.. ..+..++|++++. .++++++.++|++
T Consensus 426 ~l~~~L~~~g~~~~~~~~-~~g~~~lR~~~~~~~tt~~di~~~~~~i~~ 473 (481)
T 4e1o_A 426 NVLKEIAKAGRLFLIPAT-IQDKLIIRFTVTSQFTTRDDILRDWNLIRD 473 (481)
T ss_dssp HHHHHHHHHCSSBCEEEE-ETTEEEEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCeEEEEeeE-ECCEEEEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 88888987774 444432 2335789999763 3455555555543
No 226
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.86 E-value=1.1e-20 Score=189.45 Aligned_cols=294 Identities=9% Similarity=-0.012 Sum_probs=198.5
Q ss_pred CCC-CCcchHHHHHHH----HHHhCCCCC---------cEEEeCCHHHHHHHHHHHhcC-------------------CC
Q 014492 124 YIY-PDPESRRLRAAL----AKDSGLESD---------HILVGCGADELIDLIMRCVLD-------------------PG 170 (423)
Q Consensus 124 ~~Y-~~~g~~~lr~~i----a~~~g~~~~---------~i~~t~G~~~al~~~~~~l~~-------------------~g 170 (423)
..| ..++..++++.+ ++.+|.+.+ ..++|+|+++++..++.+... ++
T Consensus 103 ~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~ 182 (475)
T 3k40_A 103 FTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGK 182 (475)
T ss_dssp SSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHH
T ss_pred cCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCC
Confidence 345 445666666665 555687543 688999999998777765421 34
Q ss_pred CeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcC-----CceEEEEcCCCCCcCcCCCHHHHHHHHc
Q 014492 171 DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILE 245 (423)
Q Consensus 171 d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~~~~l~~i~~ 245 (423)
+.|+++.++|..+...++..|++++.+|.++++ +|+++|++++.+. .+.+|+++.++|+||.+.++++|.++|+
T Consensus 183 ~~vi~s~~~H~s~~~~~~~~g~~~~~v~~d~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l~~I~~la~ 261 (475)
T 3k40_A 183 LVGYCSDQAHSSVERAGLLGGVKLRSVQSENHR-MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGN 261 (475)
T ss_dssp EEEEEETTSCHHHHHHHHHHTCEEEEECCBTTB-CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHH
T ss_pred eEEEECCCchHHHHHHHHHcCCceEEEECCCCC-cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCHHHHHHHHH
Confidence 689999999999999999999999999988788 9999999999642 1677888899999999999999999998
Q ss_pred C-CCEEEEccCCccccC-CCchhhhhcc-CCcEEEEccChhhhcccCccccccccCH-HHHHHHHHhcCC----------
Q 014492 246 M-PILVVLDEAYTEFSG-LESRMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWRAKQP---------- 311 (423)
Q Consensus 246 ~-~~~li~Deay~~~~~-~~~~~~~~~~-~~~~i~i~S~SK~~g~~G~R~G~i~~~~-~~~~~l~~~~~~---------- 311 (423)
. |+++++|++|..... .+.....+.. .....+..+++|.++ ....+|+++..+ +.+.........
T Consensus 262 ~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~-~p~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~ 340 (475)
T 3k40_A 262 KHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWML-VNFDCSAMWLKDPSWVVNAFNVDPLYLKHDMQGSA 340 (475)
T ss_dssp HTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSS-CCSSCEEEEESSGGGC-------------------
T ss_pred HhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccC-CCCceEEEEEeCHHHHHHHhcCCccccCCCcCCCC
Confidence 7 999999999986432 1111111111 122467788999765 334567766643 332211110000
Q ss_pred -----CC------CcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeec-CCCceEEEEEeCC-CCCHHH
Q 014492 312 -----YN------VSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPY-PSYSNFILCEVTS-GMDAKK 378 (423)
Q Consensus 312 -----~~------~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~~~~~~~~~~~~-~~~~~~ 378 (423)
++ ...+.+.++..++. .+.++++.++..++++++.+.|++++++.+. +...++++++++. .....+
T Consensus 341 ~~~~~~~~~~sr~~~~l~l~~al~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~~~~~~~iv~f~~~~~~~~~~~ 419 (475)
T 3k40_A 341 PDYRHWQIPLGRRFRALKLWFVLRLYG-VENLQAHIRRHCNFAKQFGDLCVADSRFELAAEINMGLVCFRLKGSNERNEA 419 (475)
T ss_dssp --------CCCGGGTHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHSTTEEESSCCBTTEEEEEESSCHHHHHH
T ss_pred CCcccccccCCCcccHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEeCCchHHHHH
Confidence 00 11333444444442 3557888899999999999999998777653 5567788888853 223678
Q ss_pred HHHHHHhCCcE-EEeCCCCCCCCeEEEEec----ChhhHHHHHHHHhh
Q 014492 379 LKDDLAKMGVM-IRHYNNKELKGYVRVSVG----KPEHTDALMECLMH 421 (423)
Q Consensus 379 l~~~L~~~gI~-v~~~~~~~~~~~iRis~~----~~~~~~~l~~al~~ 421 (423)
+.+.|.++|+. +.+.. ..+..++|++++ +.++++++.++|++
T Consensus 420 l~~~L~~~g~~~~~~~~-~~g~~~lR~~~~~~~tt~~di~~~~~~i~~ 466 (475)
T 3k40_A 420 LLKRINGRGHIHLVPAK-IKDVYFLRMAICSRFTQSEDMEYSWKEVSA 466 (475)
T ss_dssp HHHHHHHHTSCBCEEEE-ETTEEEEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHhCCcEEEEeeE-ECCEEEEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 88899876654 34332 233679999986 34455555555544
No 227
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.86 E-value=3.1e-21 Score=187.51 Aligned_cols=300 Identities=12% Similarity=0.038 Sum_probs=202.5
Q ss_pred CCCCCHHHHHHHhcCC-C-----------CCCCCC--cchHHHHHHHHHHhCCCC-CcEEE-eCCHHHHHHHHHHHhcCC
Q 014492 106 PYGPPPEVREALGQLK-F-----------PYIYPD--PESRRLRAALAKDSGLES-DHILV-GCGADELIDLIMRCVLDP 169 (423)
Q Consensus 106 ~~~~~~~v~~al~~~~-~-----------~~~Y~~--~g~~~lr~~ia~~~g~~~-~~i~~-t~G~~~al~~~~~~l~~~ 169 (423)
+.+.+++|++++.+.. . .++.+. .-.++.|+.+++++|++. ++|++ |+|+|+++++++..++++
T Consensus 35 pt~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~ai~~l~~~ 114 (386)
T 3qm2_A 35 PAMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLNIPSNYKVLFCHGGGRGQFAGVPLNLLGD 114 (386)
T ss_dssp SCCCCHHHHHHHTCC-----------------------CCHHHHHHHHHHHTCCTTEEEEEEESCTTHHHHHHHHHHCTT
T ss_pred CCCCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhccCC
Confidence 3456899999997631 1 011111 135789999999999854 47888 699999999999999999
Q ss_pred CCeEEEcCCCch--hhHHHHHHCCCeEEEecCC---CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcC-CCHHHHHHH
Q 014492 170 GDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI-INDEDLLKI 243 (423)
Q Consensus 170 gd~Vl~~~p~y~--~~~~~~~~~g~~~~~v~~~---~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~-~~~~~l~~i 243 (423)
||+|++..-++. .+...++..| ++..++.+ .+..+++++++..++ +++++|.+++..|.||++ .|.+++.
T Consensus 115 gd~v~~~~~~~~~~~~~~~a~~~G-~v~~v~~~~~~~G~~~~~~~~~~~l~-~~t~lV~~~h~et~tG~~i~pi~~i~-- 190 (386)
T 3qm2_A 115 KTTADYVDAGYWAASAIKEAKKYC-APQIIDAKITVDGKRAVKPMREWQLS-DNAAYLHYCPNETIDGIAIDETPDFG-- 190 (386)
T ss_dssp CCEEEEEESSHHHHHHHHHHTTTS-EEEEEECEEEETTEEEECCGGGCCCC-TTCSCEEECSEETTTTEECCCCCCCC--
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhC-CeEEEecCcccCCCCCCchHHHhhcC-CCCcEEEEECCcCCcCEecCchhhhc--
Confidence 998764443333 2334455678 88888876 332377888888886 789999999988999996 7777663
Q ss_pred HcCCCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHH-------------H-Hhc
Q 014492 244 LEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYL-------------W-RAK 309 (423)
Q Consensus 244 ~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l-------------~-~~~ 309 (423)
.|+++++|.+++.... +-. +...+ +.+.|..|.+|.+| +|+++.+++.++++ . ...
T Consensus 191 --~g~~~~vDa~qs~g~~-pid---v~~~~--~~~~s~hK~lGP~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~ 260 (386)
T 3qm2_A 191 --PEVVVTADFSSTILSA-PLD---VSRYG--VIYAGAQKNIGPAG--LTLVIVREDLLGKAHESCPSILDYTVLNDNDS 260 (386)
T ss_dssp --TTCCEEEECTTTTTSS-CCC---GGGCS--EEEEETTTTTCCTT--EEEEEEEGGGCSCCCTTSCGGGCHHHHHHC--
T ss_pred --CCCEEEEEcccccCCC-CCC---ccccC--EEEEecccccCCCc--cEEEEECHHHHhhhcccCCcHHHHHHHhhcCC
Confidence 6899999999884332 111 22333 45678899998777 68787765542211 1 111
Q ss_pred CCCCCcHHHHHHHHHHhCC--hH-HHHHHHHHHHHHHHHHHHHHccCCCCeec--C--CCceEEEEEeCC-CCCHHHHHH
Q 014492 310 QPYNVSVAAEVAACAALQN--PI-YLEKVKEALIKERERLFKLLKDVPFLNPY--P--SYSNFILCEVTS-GMDAKKLKD 381 (423)
Q Consensus 310 ~~~~~~~~~~~a~~~~l~~--~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~--p--~~~~~~~~~~~~-~~~~~~l~~ 381 (423)
.+++++.....++..+++. .. .+++..++.+++++++++.|+++++.... + .....+.+.+++ +.+ ..+..
T Consensus 261 ~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~iv~f~~~~~~~~-~~~~~ 339 (386)
T 3qm2_A 261 MFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNSDFYRNDVAQANRSRMNVPFQLADNTLD-KVFLE 339 (386)
T ss_dssp -----CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTCSSEECCBCGGGBCSSEEEEEESSGGGH-HHHHH
T ss_pred CCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHcCceEEEEECCCcccc-HHHHH
Confidence 2245555556666666643 22 47888899999999999999988642221 1 123467778874 344 67788
Q ss_pred HHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492 382 DLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL 422 (423)
Q Consensus 382 ~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l 422 (423)
.|.++||.++.+... .+.+|+|+. +.+++++|.++|+++
T Consensus 340 ~L~~~gI~~~~g~~~--~~~iRiS~~~~~t~edId~l~~~l~~~ 381 (386)
T 3qm2_A 340 ESFAAGLHALKGHRV--VGGMRASIYNAMPIEGVKALTDFMIDF 381 (386)
T ss_dssp HHHHTTEECCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred HHHHCCCEEeCCCCC--cCeEEEEcCCCCCHHHHHHHHHHHHHH
Confidence 888999998876432 356999986 477888888888765
No 228
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.85 E-value=1.7e-20 Score=180.65 Aligned_cols=304 Identities=13% Similarity=0.077 Sum_probs=210.8
Q ss_pred CeeEcCCCCCCCCCCHHHHHHHhcCCC------------CCCCCCc--chHHHHHHHHHHhCCC-CCcEEE-eCCHHHHH
Q 014492 96 DIVKIDANENPYGPPPEVREALGQLKF------------PYIYPDP--ESRRLRAALAKDSGLE-SDHILV-GCGADELI 159 (423)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~~~------------~~~Y~~~--g~~~lr~~ia~~~g~~-~~~i~~-t~G~~~al 159 (423)
+.+.|.. .+.+.+++|++++.+.-. .++-+.. -.++.|+.+++++|++ +++|++ |+|+++++
T Consensus 5 ~~~~f~p--gpt~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~~~~v~f~t~~~T~a~ 82 (361)
T 3m5u_A 5 RKINFSA--GPSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELNDDYEVLFLQGGASLQF 82 (361)
T ss_dssp CCEECCS--SSCCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHH
T ss_pred ceEeecC--CCCCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCcHHHHH
Confidence 3455655 345567999999987311 0111111 2468899999999986 457887 99999999
Q ss_pred HHHHHHhcCCCCeEE-EcCCCch-hhHHHHHHCCCeEEEecCCCCCC--CCHHHHHHHhhcCCceEEEEcCCCCCcCcCC
Q 014492 160 DLIMRCVLDPGDKIV-DCPPTFT-MYEFDAAVNGAAVVKVPRKSDFS--LNVELIADAVEREKPKCIFLTSPNNPDGSII 235 (423)
Q Consensus 160 ~~~~~~l~~~gd~Vl-~~~p~y~-~~~~~~~~~g~~~~~v~~~~~~~--~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~ 235 (423)
++++..++ +||++. +....|. .+...++..|+++..++.+.+.. .+++. + ++ +++++|.++|..|.||+++
T Consensus 83 n~~~~~~~-~~~~~~~i~~~~~~~~~~~~a~~~G~~v~~~~~~~~g~~~~~~~~--~-l~-~~t~lv~~~~~e~~tG~~~ 157 (361)
T 3m5u_A 83 AMIPMNLA-LNGVCEYANTGVWTKKAIKEAQILGVNVKTVASSEESNFDHIPRV--E-FS-DNADYAYICSNNTIYGTQY 157 (361)
T ss_dssp HHHHHHHC-CSSCEEEEECSHHHHHHHHHHHHTTCCEEEEEECTTTTSCSCCCC--C-CC-TTSSEEEEESEETTTTEEC
T ss_pred HHHHHhcC-CCCeEEEEeCCHHHHHHHHHHHHcCCceEEEecccCcCCCcCChh--h-cC-CCCCEEEEeCCCCCcceeC
Confidence 99999998 788652 3333342 33445667899999998765543 46665 3 75 6899999999999999987
Q ss_pred CHHHHHHHHcCCCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHH--------
Q 014492 236 NDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR-------- 307 (423)
Q Consensus 236 ~~~~l~~i~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~-------- 307 (423)
+. |++.|+++++|.+++..... -... +-.+++.|..|.+|.+| +|+++.+++..+.+..
T Consensus 158 ~~-----i~~~~~~~~vD~~q~~g~~~-id~~-----~~d~~~~s~~K~~gp~G--~g~l~~~~~~~~~~~~~~~p~~~~ 224 (361)
T 3m5u_A 158 QN-----YPKTKTPLIVDASSDFFSRK-VDFS-----NIALFYGGVQKNAGISG--LSCIFIRKDMLERSKNKQIPSMLN 224 (361)
T ss_dssp SS-----CCCCSSCEEEECGGGTTSSC-CCCT-----TEEEEEEETTTTSSCTT--CEEEEEEHHHHHHHHTCCCCGGGC
T ss_pred Cc-----ccccCCEEEEEcccccCCCC-CCcc-----cCCEEEEechhccCCCc--cEEEEEcHHHHhhhcCCCCCceee
Confidence 72 44559999999998744321 1111 12377889999998777 6889888888766532
Q ss_pred -------hcCCCCCcHHHHHHHHHHhCC--hH-HHHHHHHHHHHHHHHHHHHHccCCCC-eec-C---CCceEEEEEeCC
Q 014492 308 -------AKQPYNVSVAAEVAACAALQN--PI-YLEKVKEALIKERERLFKLLKDVPFL-NPY-P---SYSNFILCEVTS 372 (423)
Q Consensus 308 -------~~~~~~~~~~~~~a~~~~l~~--~~-~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~-p---~~~~~~~~~~~~ 372 (423)
...+++++.....++.++++. .. .++.+.++.+++++++++.|++++++ ... + .....+.+.+++
T Consensus 225 ~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~ 304 (361)
T 3m5u_A 225 YLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDLSNGFYKGHADKKDRSLMNVSFNIAK 304 (361)
T ss_dssp HHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTSTTSEEESSCGGGBCSSEEEEEESS
T ss_pred hHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCeeeccCCHHHcCCeEEEEECCC
Confidence 112246777777777666653 22 37888999999999999999999854 332 1 123456778874
Q ss_pred --CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492 373 --GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL 422 (423)
Q Consensus 373 --~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l 422 (423)
+.+ .++...|.++||.++.+.. ..+.+|+|+. +.++++++.++|+++
T Consensus 305 ~~~~~-~~~~~~L~~~gI~~~~g~~--~~g~iRiS~~~~~t~edId~l~~al~~~ 356 (361)
T 3m5u_A 305 NKDLE-PLFVKEAEEAGMIGLKGHR--ILGGIRASIYNALNLDQVKTLCEFMKEF 356 (361)
T ss_dssp CTTHH-HHHHHHHHHTTEECCBCCT--TTCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred chhhh-HHHHHHHHHCCCEEecCCC--ccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 233 5788888899999887643 2356999986 577788888888765
No 229
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.82 E-value=1.3e-18 Score=179.93 Aligned_cols=287 Identities=10% Similarity=0.103 Sum_probs=194.3
Q ss_pred CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC-CCCCC
Q 014492 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSL 205 (423)
Q Consensus 127 ~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~ 205 (423)
|..-..++++.+|+++|.+ ..+++++|++.++..++.++++|||.|+++.++|.++...++..|++++.++.+ +++++
T Consensus 193 ~~g~i~eaE~~lA~~fGa~-~a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~~l~lsGa~pv~v~~~~~~~gi 271 (715)
T 3n75_A 193 HSGPHKEAEQYIARVFNAD-RSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGI 271 (715)
T ss_dssp TBTHHHHHHHHHHHHHTCS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHSCCEEEEECCCBCTTCC
T ss_pred CcHHHHHHHHHHHHHhCCC-CceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHHHHHHcCCEEEEEecccccccc
Confidence 3333679999999999974 567889999999999999999999999999999999999999999999999853 23443
Q ss_pred ---------CHHHHHHHhhcC-Cce---EEEEcCCCCCcCcCCCHHHHHHHHcCCCEEEEccCCcccc-CCCch--hhhh
Q 014492 206 ---------NVELIADAVERE-KPK---CIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFS-GLESR--MEWV 269 (423)
Q Consensus 206 ---------d~~~l~~~i~~~-~~~---~i~l~~p~NPtG~~~~~~~l~~i~~~~~~li~Deay~~~~-~~~~~--~~~~ 269 (423)
|++++++++.+. ++| ++++++| ||+|.+++.+++.++|+.. .+++||+|..+. +.+.. ...+
T Consensus 272 ~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~dl~~I~ela~~~-~livDEAH~~~~~f~~~~~~~~al 349 (715)
T 3n75_A 272 LGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIKKTLDVK-SIHFDSAWVPYTNFSPIYEGKCGM 349 (715)
T ss_dssp BCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEECHHHHHHHCCCS-EEEEECTTCTTGGGSGGGTTSSTT
T ss_pred ccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCCHHHHHHHhCcC-cEEEccccccccccCCcccccccc
Confidence 899999999742 334 8999999 9999999999999999863 379999998653 32211 1112
Q ss_pred cc---CCcE-EEEccChhhhcccCc-cccccccCHH----HHHHHHHhcCCCCCcHHHHHHHHHHhCCh--HHHHHHHHH
Q 014492 270 KK---HDNL-IVLRTFSKRAGLAGL-RVGYGAFPLS----IIEYLWRAKQPYNVSVAAEVAACAALQNP--IYLEKVKEA 338 (423)
Q Consensus 270 ~~---~~~~-i~i~S~SK~~g~~G~-R~G~i~~~~~----~~~~l~~~~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~ 338 (423)
.. .+.+ +++.|+||.++ |+ ..|+++++++ .+++........+++.+..+++..+++.- ..-++.+++
T Consensus 350 ~~g~~aD~vii~~~S~hKtL~--gltqgs~i~v~~~i~~~~~~~~~~~~~STSpsy~~~AsldaA~~~~~~~~g~~~~~~ 427 (715)
T 3n75_A 350 SGGRVEGKVIYETQSTHKLLA--AFSQASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKRLING 427 (715)
T ss_dssp SSSCCTTCEEEEEECHHHHSS--CCTTCEEEEEESCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred ccCcCCCEEEEEEeccccccc--CCCCeeEEEeCchhhHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhccHHHHHH
Confidence 11 2343 66999999864 54 2477777543 33444444455667777666665555321 122344555
Q ss_pred HHHHHHHHHHHHccCC-----C-CeecC-------------------------CCceE-----EEEEeCC----------
Q 014492 339 LIKERERLFKLLKDVP-----F-LNPYP-------------------------SYSNF-----ILCEVTS---------- 372 (423)
Q Consensus 339 ~~~~~~~l~~~L~~~~-----~-~~~~p-------------------------~~~~~-----~~~~~~~---------- 372 (423)
+.++.+++++.|++++ | +.+.. .+..+ +.+..++
T Consensus 428 l~~~a~~~r~~L~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~gf~~~~~~~~~~Dp~Kl~i~~~~~~~~G~~~~~ 507 (715)
T 3n75_A 428 SIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMEKDGTMSDF 507 (715)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSCCCEESSCSCCCSCSCEECCTTCCTTCCTTCCSSSEEECTTEEEEECSCBCTTSCBCSS
T ss_pred HHHHHHHHHHHHHHhhhhcccceeeccCcccccchhhhccCcccccccccccccCcccCCCeEEEEEcCCCCCCCccccC
Confidence 5666666666665442 1 12211 01111 3455542
Q ss_pred CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEE--Eec-ChhhHHHHHHHHhhh
Q 014492 373 GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRV--SVG-KPEHTDALMECLMHL 422 (423)
Q Consensus 373 ~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRi--s~~-~~~~~~~l~~al~~l 422 (423)
|.++..+.+.|.++||.+...+ ...|=+ +++ +.++.++|.++|.++
T Consensus 508 Gi~g~~~~~~L~~~~I~~E~~d----~~~vl~l~s~g~~~~~~~~L~~aL~~~ 556 (715)
T 3n75_A 508 GIPASIVAKYLDEHGIVVEKTG----PYNLLFLFSIGIDKTKALSLLRALTDF 556 (715)
T ss_dssp CCCHHHHHHHHHHTTCCCSEEE----TTEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHCCCEEEecC----CCcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 5677899999999999887654 233333 333 456677888887765
No 230
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.72 E-value=2.9e-16 Score=154.96 Aligned_cols=315 Identities=16% Similarity=0.146 Sum_probs=199.1
Q ss_pred CCCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-CCCCCCC--CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHH
Q 014492 91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFPYIY--PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (423)
Q Consensus 91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~~~Y--~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~ 164 (423)
+.+++.+||+..+ .+.++ .+|+|.+|+.+ +.....+ +.....++.+.|++.+. ..+.+++++++++|+..+++
T Consensus 83 D~dG~~ylD~~~g~~~~~lGH~hp~v~~Av~~q~~~~~~~~~~~~~~~~lae~l~~~~p-~~~~v~f~~SGsEA~e~Aik 161 (454)
T 4ao9_A 83 DADGHRYADFIAEYTAGVYGHSAPEIRDAVIEAMQGGINLTGHNLLEGRLARLICERFP-QIEQLRFTNSGTEANLMALT 161 (454)
T ss_dssp ETTCCEEEESSGGGGTTTTCSCCHHHHHHHHHHHHTCSCCCSEESSHHHHHHHHHHHST-TCSEEEEESSHHHHHHHHHH
T ss_pred ECCCCEEEEccccHHhhcccCCCHHHHHHHHHHHhcCCCccCCcHHHHHHHHHHHHhCC-CCCEEEEeCchHHHHHHHHH
Confidence 4567889998765 44455 47999988876 3322222 33446689999999886 46799999999999999988
Q ss_pred Hhc--CCCCeEEEcCCCchhhHHHHHH------CCCeEEEecCCCCCCCCHHHHHHHhhc--CCceEEEEcCCCCCcCcC
Q 014492 165 CVL--DPGDKIVDCPPTFTMYEFDAAV------NGAAVVKVPRKSDFSLNVELIADAVER--EKPKCIFLTSPNNPDGSI 234 (423)
Q Consensus 165 ~l~--~~gd~Vl~~~p~y~~~~~~~~~------~g~~~~~v~~~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~ 234 (423)
... ...++|+....+|+.....+-. .......+| .-|++.+++.+++ .++.+|++...+...|.+
T Consensus 162 lAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p-----~nd~~~l~~~l~~~~~~iAavIvEPv~g~~G~~ 236 (454)
T 4ao9_A 162 AALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLP-----YNDAQTARAQIERHGPEIAVVLVEPMQGASGCI 236 (454)
T ss_dssp HHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEEC-----TTCHHHHHHHHHHTGGGEEEEEECSEESTTTCE
T ss_pred HHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccCC-----CchHHHHHHHHhhcCCceEEEEeccccCCCCcc
Confidence 543 1237888888888643211100 111233333 2378889888864 357788888777778988
Q ss_pred CC----HHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhc
Q 014492 235 IN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK 309 (423)
Q Consensus 235 ~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~ 309 (423)
.+ ++++++||+. |+++|+||++..-....-.....+..+.++ +++|.+| .|+.+|.+.+.+++++.+....
T Consensus 237 ~p~~~fL~~lr~lc~~~g~lLI~DEV~tGR~G~~~a~e~~gv~PDi~---t~gK~lg-gG~Piga~~~~~ei~~~~~~~~ 312 (454)
T 4ao9_A 237 PGQPDFLQALRESATQVGALLVFDEVMTSRLAPHGLANKLGIRSDLT---TLGKYIG-GGMSFGAFGGRADVMALFDPRT 312 (454)
T ss_dssp ECCHHHHHHHHHHHHHHTCEEEEECTTGGGGSTTCHHHHHTCCCSEE---EEEGGGG-TTSSCEEEEECHHHHGGGCTTT
T ss_pred CCchhhHHHHHHHHhhcCCEEEEECCCcCCCccccchhccCCCCcEE---EeccccC-CCCcceeeeeHHHHHHHHhhcc
Confidence 77 6677777877 999999999973211111122233334443 4689998 7899999999999998775321
Q ss_pred ------CCCCCcHHHHHHHHHHhC---ChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCC-------
Q 014492 310 ------QPYNVSVAAEVAACAALQ---NPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSG------- 373 (423)
Q Consensus 310 ------~~~~~~~~~~~a~~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~------- 373 (423)
..|+.|+++..++.+.|+ +++..++..+.-+..++.|.+.+++.+.+......|.++.+.+.++
T Consensus 313 ~~~~h~~T~~gnPla~AAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~m~gi~f~~~~~~~~~~ 392 (454)
T 4ao9_A 313 GPLAHSGTFNNNVMTMAAGYAGLTKLFTPEAAGALAERGEALRARLNALCANEGVAMQFTGIGSLMNAHFVQGDVRSSED 392 (454)
T ss_dssp CSCCCCCTTTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHTBSCEEEEETTEEEEESCCSCCCSGGG
T ss_pred CCccccCCCCCCHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHhhCCCCEEEeeeceEEEEEEecCCCCCHHH
Confidence 235678888888877765 3444444444444444444444444443332334566666665321
Q ss_pred ---CC---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHhh
Q 014492 374 ---MD---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLMH 421 (423)
Q Consensus 374 ---~~---~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~~ 421 (423)
.+ ...++..|+++||++.|.. .+.++.. +++++|++.+++++
T Consensus 393 ~~~~d~~~~~~~~~~ll~~Gv~~~p~~------~~~~s~~~T~~dId~~l~al~~ 441 (454)
T 4ao9_A 393 LAAVDGRLRQLLFFHLLNEDIYSSPRG------FVVLSLPLTDADIDRYVAAIGS 441 (454)
T ss_dssp GTTCCHHHHHHHHHHHHHTTEECCTTC------EEECCTTCCHHHHHHHHHHHHH
T ss_pred HHhhhHHHHHHHHHHHHHCCEEEcCCC------CEEEeCCCCHHHHHHHHHHHHH
Confidence 12 2346677889999987643 3344433 45566666666654
No 231
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.67 E-value=7.7e-15 Score=145.35 Aligned_cols=325 Identities=13% Similarity=0.120 Sum_probs=198.8
Q ss_pred CCCCCCeeEcCCC--CCCCC-CCHHHHHHHhc----CCCCCCC--CCcchHHHHHHHHHHhCC-CCCcEEEeCCHHHHHH
Q 014492 91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ----LKFPYIY--PDPESRRLRAALAKDSGL-ESDHILVGCGADELID 160 (423)
Q Consensus 91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~----~~~~~~Y--~~~g~~~lr~~ia~~~g~-~~~~i~~t~G~~~al~ 160 (423)
+.+++.+||+..+ .+.++ .+|++.+|+.+ ..+...+ +.....+|.+.+++.... ..+.+++++++++|++
T Consensus 60 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~v~f~~sGsEA~e 139 (456)
T 4atq_A 60 DVDGNSFIDLGSGIAVTSVGASDPAVVAAVQEAAAHFTHTCFMVTPYEGYVAVTEQLNRLTPGDHAKRTVLFNSGAEAVE 139 (456)
T ss_dssp ETTSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHCSCCTTTTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHH
T ss_pred eCCCCEEEEccccHHHHhcCCCCHHHHHHHHHHHhhccCcccCccCcHHHHHHHHHHHHhCCCCCCcEEEEeCChHHHHH
Confidence 4567889999776 55565 46899888865 2222222 333455788888888754 3568999999999999
Q ss_pred HHHHHhc--CCCCeEEEcCCCchhhHHHHHH-CC-------------CeEEEecCCC------CCCCCHHHHHH------
Q 014492 161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NG-------------AAVVKVPRKS------DFSLNVELIAD------ 212 (423)
Q Consensus 161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g-------------~~~~~v~~~~------~~~~d~~~l~~------ 212 (423)
.+++... ....+|+....+|++....+.. .+ ..+..+|... ....+.+.+++
T Consensus 140 ~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e 219 (456)
T 4atq_A 140 NAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIE 219 (456)
T ss_dssp HHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHHH
Confidence 9998432 2347889888888754433221 11 2345555221 11122333333
Q ss_pred -HhhcCCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEEEccChhh
Q 014492 213 -AVEREKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKR 284 (423)
Q Consensus 213 -~i~~~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~ 284 (423)
.+...++.+|++...+...|.+.+ .++++++|+. |+++|.||++..|...+.. ....+..+.++ +++|.
T Consensus 220 ~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv~PDiv---t~gK~ 296 (456)
T 4atq_A 220 KQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGVVPDII---TMAKG 296 (456)
T ss_dssp HHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEE---EECGG
T ss_pred HhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccccccccccCCCCchh---hhhhc
Confidence 222346888898877777787765 4556667776 9999999999987543322 12222234443 35799
Q ss_pred hcccCccccccccCHHHHHHHHHhc--CCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCC-----
Q 014492 285 AGLAGLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVP----- 354 (423)
Q Consensus 285 ~g~~G~R~G~i~~~~~~~~~l~~~~--~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~----- 354 (423)
+| .|+.+|.+++.+++.+.+.... ..|+.++++.+++.+.|+. ++.+++..+.-...++.|.+..++++
T Consensus 297 lg-gg~P~~av~~~~~i~~~~~~~~~~~Tf~gnpla~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~ 375 (456)
T 4atq_A 297 IA-GGLPLSAITGRADLLDAVHPGGLGGTYGGNPVACAAALAAIDTMEQHDLNGRARHIEELALGKLRELAAELSAGGGS 375 (456)
T ss_dssp GG-TTSSCEEEEEEHHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCC-----
T ss_pred cc-CcCCceeeEecHHHHhcccccCCCCCCCCChHHHHhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhcccccCC
Confidence 87 8899999999999887765433 3477899999888888863 22233332222223333333333332
Q ss_pred CCeecCCCceEEEEEeCCCC-------CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014492 355 FLNPYPSYSNFILCEVTSGM-------DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH 421 (423)
Q Consensus 355 ~~~~~p~~~~~~~~~~~~~~-------~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~ 421 (423)
.+.-..+.|.++.+++.+.. -...+.+.++++|+++.+.+. ..+.|||......+.++++++++.
T Consensus 376 ~v~~VRG~Gl~~giel~~~~~~~~~~~~~~~v~~~~~~~Gvl~~~~g~--~~~~irl~PpL~it~~~id~~l~~ 447 (456)
T 4atq_A 376 VVGDIRGRGAMLAIELVQPGSKEPNAELTKAVAAACLKEGVIILTCGT--YGNVIRLLPPLVISDELLIDGLEV 447 (456)
T ss_dssp CEEEEEEETTEEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECEEECT--TSCEEEECCCTTCCHHHHHHHHHH
T ss_pred ceEEeeecceEEEEEEecCCCCCcCHHHHHHHHHHHHHCCCEEEecCC--CCCEEEEECCCCCCHHHHHHHHHH
Confidence 22222456778888874211 145688888999999987542 246899996532222444444443
No 232
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.67 E-value=1.3e-14 Score=139.65 Aligned_cols=313 Identities=14% Similarity=0.130 Sum_probs=201.3
Q ss_pred eeEcCCCCCCCCCCHHHHHHHhcC---CCCCCCCC------cc-hHH----HHHHHHHHhCCCCC----cEEEeCCHHHH
Q 014492 97 IVKIDANENPYGPPPEVREALGQL---KFPYIYPD------PE-SRR----LRAALAKDSGLESD----HILVGCGADEL 158 (423)
Q Consensus 97 ~i~l~~~~~~~~~~~~v~~al~~~---~~~~~Y~~------~g-~~~----lr~~ia~~~g~~~~----~i~~t~G~~~a 158 (423)
-|.|=..||-. ++.|.+++... .+.-+||. .. ..+ .++...+.||++.. ||-.-+|++ |
T Consensus 56 ~ieLIASEN~~--S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~rak~lF~a~~A~w~VNVQP~SGs~-A 132 (490)
T 3ou5_A 56 GLELIASENFC--SRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSP-A 132 (490)
T ss_dssp SEECCTTCCCC--CHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHH-H
T ss_pred CceEecCCCcC--CHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHHHHHHhCCCccccCCCCCcCCHHH-H
Confidence 38888888866 58999998763 23334442 11 122 33445567898876 677777775 6
Q ss_pred HHHHHHHhcCCCCeEEEcCCCchhhHHHH--------HHCCC--eEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEcCC
Q 014492 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDA--------AVNGA--AVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSP 227 (423)
Q Consensus 159 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~--------~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p 227 (423)
...++.+|++|||+|+..+..+.++...- ...|. +.+.++.+ ++..+|.|++++...+.+||+|++-.-
T Consensus 133 N~avy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~t~~IDyd~~~~~A~~~kPklIi~G~S 212 (490)
T 3ou5_A 133 NLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTS 212 (490)
T ss_dssp HHHHHHHHCC-CCCEECBC----------------------------CBCEETTTTEECHHHHHHHHHHHCCSEEEECCS
T ss_pred HHHHHHHHcCCCCEEEecccCCCCcccccccCCCcccccccccccccccccCCCCCcccHHHHHHHHhhcCCCeEEECCc
Confidence 66788889999999998887775432211 11222 23444433 456799999999998889999997654
Q ss_pred CCCcCcCCCHHHHHHHHcC-CCEEEEccCCccc-cCC---CchhhhhccCCcEEEEccChhhhcccCccccccccCH---
Q 014492 228 NNPDGSIINDEDLLKILEM-PILVVLDEAYTEF-SGL---ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL--- 299 (423)
Q Consensus 228 ~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~-~~~---~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~--- 299 (423)
.+| ..++.+++++||+. |.+|++|-+|.-. .-+ ++++.. . .++..|.+|++ .|-|-|.|+.++
T Consensus 213 aY~--r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~~----A-DvVTtTTHKTL--rGPrGG~Il~~~~~~ 283 (490)
T 3ou5_A 213 AYA--RLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKH----A-DIVTTTTHKTL--RGARSGLIFYRKGVK 283 (490)
T ss_dssp SCC--SCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGT----C-SEEEEESSSTT--CSCSCEEEEEECSEE
T ss_pred cCc--cccCHHHHHHHHhhcccEEEechhhhhhhhcccccCCcccc----c-eEEeccccccc--cCCCceEEEeccccc
Confidence 444 77899999999998 9999999999642 211 233332 2 37788889986 788999999765
Q ss_pred ------------HHHHHHHHhcCCC---CCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeecC-C
Q 014492 300 ------------SIIEYLWRAKQPY---NVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPYP-S 361 (423)
Q Consensus 300 ------------~~~~~l~~~~~~~---~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p-~ 361 (423)
++.+++.+...|. ++.....++...++.. ....++..+++.+|.+.|.+.|.+.++-.+.. .
T Consensus 284 ~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~G~~vvsGgT 363 (490)
T 3ou5_A 284 AVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLERGYSLVSGGT 363 (490)
T ss_dssp EECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSC
T ss_pred cccccccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhCCCeeecCCC
Confidence 4567777766553 2222222222222322 23457788888999999999999887544432 2
Q ss_pred CceEEEEEeC-CCCCHHHHHHHHHhCCcEEE----eCCC-CCCCCeEEEEec-------ChhhHHHHHHHHhh
Q 014492 362 YSNFILCEVT-SGMDAKKLKDDLAKMGVMIR----HYNN-KELKGYVRVSVG-------KPEHTDALMECLMH 421 (423)
Q Consensus 362 ~~~~~~~~~~-~~~~~~~l~~~L~~~gI~v~----~~~~-~~~~~~iRis~~-------~~~~~~~l~~al~~ 421 (423)
....+++++. .+.+..+..+.|.+.||.+. |++. +..++.|||... .+++++++.+.|.+
T Consensus 364 dnHlvLvDl~~~g~tG~~ae~~Le~agItvNkN~iP~D~sp~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~ 436 (490)
T 3ou5_A 364 DNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDE 436 (490)
T ss_dssp SSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHH
T ss_pred CceEEEEeccccCCCHHHHHHHHHHcCcEECCCCCCCCCCCCCCCeeEECCHHHHhCCCCHHHHHHHHHHHHH
Confidence 3345677874 47788888888999999997 3432 334568999863 46667777766653
No 233
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.62 E-value=2.2e-13 Score=135.43 Aligned_cols=319 Identities=15% Similarity=0.145 Sum_probs=194.9
Q ss_pred CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-C---CCCCCC---CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHH
Q 014492 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-L---KFPYIY---PDPESRRLRAALAKDSGLESDHILVGCGADELID 160 (423)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~---~~~~~Y---~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~ 160 (423)
+.+++.+||+..+. +.++ .+|++.+|+.+ + .+.+.+ +.....+|-+.|++..+.+.+.|++++++++|++
T Consensus 63 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~l~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGsEA~e 142 (473)
T 4e3q_A 63 DVNGRRYLDANSGLWNMVAGFDHKGLIDAAKAQYERFPGYHAFFGRMSDQTVMLSEKLVEVSPFDSGRVFYTNSGSEAND 142 (473)
T ss_dssp ETTCCEEEETTTTTTTCTTCSCCHHHHHHHHHHHHHCCCCCCCTTEEEHHHHHHHHHHHHHSSCSSCEEEEESSHHHHHH
T ss_pred eCCCCEEEEcccCHHHhhccCCCHHHHHHHHHHHHhcccccccccccCHHHHHHHHHHHhhCCCCccEEEEeCchHHHHH
Confidence 45678899987763 3344 36888888765 2 221222 2223456778888888766679999999999999
Q ss_pred HHHHHhc-------CCC-CeEEEcCCCchhhHHHH-HHCCC-----------eEEEecCCC-----CCCCC--------H
Q 014492 161 LIMRCVL-------DPG-DKIVDCPPTFTMYEFDA-AVNGA-----------AVVKVPRKS-----DFSLN--------V 207 (423)
Q Consensus 161 ~~~~~l~-------~~g-d~Vl~~~p~y~~~~~~~-~~~g~-----------~~~~v~~~~-----~~~~d--------~ 207 (423)
.+++... .++ .+|+....+|+.....+ ...|- ..+.++.+. ..... .
T Consensus 143 ~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 222 (473)
T 4e3q_A 143 TMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFVARLA 222 (473)
T ss_dssp HHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCcccccCCCcccccccccchhhHHHHHHH
Confidence 9998532 133 57888888887433322 22221 123333211 01111 2
Q ss_pred HHHHHHhhc---CCceEEEEcCCCCCcCcCCCH----HHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEE
Q 014492 208 ELIADAVER---EKPKCIFLTSPNNPDGSIIND----EDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIV 277 (423)
Q Consensus 208 ~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~----~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~ 277 (423)
+++++.+.+ .++.+|++...+.-.|.+.+. +++++||+. |+++|.||++..|...+.. ....+..+.+++
T Consensus 223 ~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDi~t 302 (473)
T 4e3q_A 223 RELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTWGCVTYDFTPDAII 302 (473)
T ss_dssp HHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSCHHHHTTCCCSEEE
T ss_pred HHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchhHHHhcCCCCChHH
Confidence 344454432 356778887777777877653 455666666 9999999999988643332 222333344443
Q ss_pred EccChhhhcccC-ccccccccCHHHHHHHHHh---------cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHH
Q 014492 278 LRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA---------KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLF 347 (423)
Q Consensus 278 i~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~~---------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~ 347 (423)
++|.++ .| +.+|.+++++++.+.+... ...|+.++++.+++.+.|+.-+ -+...++.++.-++|.
T Consensus 303 ---~~K~l~-gG~~Pl~av~~~~~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~~i~-~~~l~~~~~~~g~~l~ 377 (473)
T 4e3q_A 303 ---SSKNLT-AGFFPMGAVILGPELSKRLETAIEAIEEFPHGFTASGHPVGCAIALKAIDVVM-NEGLAENVRRLAPRFE 377 (473)
T ss_dssp ---ECGGGG-TTSSCCEEEEECHHHHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHHHHH-HSSHHHHHHHHHHHHH
T ss_pred ---hccccc-CCCCCcccccccHHHHHHhccccccccccccCCCCCCCcchhhhhhhhhhhhc-cccHHHHHHHHHHHHH
Confidence 579998 55 9999999999998887542 2346788999888888875311 0122333444444555
Q ss_pred HHHcc---CCCCeecCCCceEEEEEeCCC-----------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---Chh
Q 014492 348 KLLKD---VPFLNPYPSYSNFILCEVTSG-----------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPE 410 (423)
Q Consensus 348 ~~L~~---~~~~~~~p~~~~~~~~~~~~~-----------~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~ 410 (423)
+.|++ .+.+.-..+.|.++-+++... .....+.+.+.++|+++++.+ +.+||+.. +.+
T Consensus 378 ~~L~~l~~~~~v~~vRG~Gl~~gielv~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g-----~~i~l~PPL~it~~ 452 (473)
T 4e3q_A 378 ERLKHIAERPNIGEYRGIGFMWALEAVKDKASKTPFDGNLSVSERIANTCTDLGLICRPLG-----QSVVLCPPFILTEA 452 (473)
T ss_dssp HHHHHHTTSTTEEEEEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEEET-----TEEEECCCTTCCHH
T ss_pred HHHHHHhcCCCeeEEeecceEEEEEEecCccccccccccHHHHHHHHHHHHHCCcEEEecC-----CEEEEeCCCCCCHH
Confidence 54443 343332345567777776321 114678888899999998865 57898854 444
Q ss_pred hHHHHHHHH
Q 014492 411 HTDALMECL 419 (423)
Q Consensus 411 ~~~~l~~al 419 (423)
+.+++.+.+
T Consensus 453 eid~~~~~l 461 (473)
T 4e3q_A 453 QMDEMFDKL 461 (473)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 444444433
No 234
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.62 E-value=6.6e-16 Score=163.51 Aligned_cols=316 Identities=14% Similarity=0.185 Sum_probs=193.2
Q ss_pred CeeEcCCC--CCCCCC--CHHHHHHHhc-C---CCCC--CCCCcchHHHHHHHHHHhCCC-CCcEEEeCCHHHHHHHHHH
Q 014492 96 DIVKIDAN--ENPYGP--PPEVREALGQ-L---KFPY--IYPDPESRRLRAALAKDSGLE-SDHILVGCGADELIDLIMR 164 (423)
Q Consensus 96 ~~i~l~~~--~~~~~~--~~~v~~al~~-~---~~~~--~Y~~~g~~~lr~~ia~~~g~~-~~~i~~t~G~~~al~~~~~ 164 (423)
.+||+.++ .+.++. +|++.+|+.+ + .+.. .+......+|.+.|++..+-. .+.+++++++++|++.+++
T Consensus 381 ~ylD~~sg~~~~~lGh~~~p~i~~Ai~~Q~~~l~h~~~~~~~~~~~~~Lae~L~~~~p~~~l~~vff~~SGSeA~E~AlK 460 (831)
T 4a0g_A 381 QQFDACASWWTQGPDPTFQAELAREMGYTAARFGHVMFPENVYEPALKCAELLLDGVGKGWASRVYFSDNGSTAIEIALK 460 (831)
T ss_dssp EEEETTHHHHTCCCCHHHHHHHHHHHHHHHHHHSSCCCTTEECHHHHHHHHHHHHTTTTTTCCEEEEESSHHHHHHHHHH
T ss_pred heeeecccHhhcCCCCCCCHHHHHHHHHHHhhcccccccccCCHHHHHHHHHHHHhCCCCCCCEEEECCChhHHHHHHHH
Confidence 57888765 445554 5889888875 2 2211 122223457888888887643 4789999999999999888
Q ss_pred Hhc-----CC------------CCeEEEcCCCchhhHH-HHHHCCCe---------------E-------------EEec
Q 014492 165 CVL-----DP------------GDKIVDCPPTFTMYEF-DAAVNGAA---------------V-------------VKVP 198 (423)
Q Consensus 165 ~l~-----~~------------gd~Vl~~~p~y~~~~~-~~~~~g~~---------------~-------------~~v~ 198 (423)
... .. ..+||...-+|+.-.. .....|.. + ..++
T Consensus 461 ~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 540 (831)
T 4a0g_A 461 MAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWNIS 540 (831)
T ss_dssp HHHHHHHHTTTC---------CCEEEEEETTCCCCSSHHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEEEEE
T ss_pred HHHHHHHhhcCCCccccccccCccEEEEecCCcccCceeeeeccCccccccccccccccCCccccCCccccccCCceEec
Confidence 542 11 2368888888863332 22333210 0 1122
Q ss_pred CCCCCC---------CC------------------HHHHHHHhh-------cCCceEEEEcCC-CCCcCcCC-C---HHH
Q 014492 199 RKSDFS---------LN------------------VELIADAVE-------REKPKCIFLTSP-NNPDGSII-N---DED 239 (423)
Q Consensus 199 ~~~~~~---------~d------------------~~~l~~~i~-------~~~~~~i~l~~p-~NPtG~~~-~---~~~ 239 (423)
.+..+. -| .+.+++.+. ..++.+|++... ++..|.+. + .++
T Consensus 541 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~ 620 (831)
T 4a0g_A 541 LPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRV 620 (831)
T ss_dssp CCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHHHHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHH
T ss_pred CCccccccccccccccchhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHH
Confidence 111100 01 256777774 235778888765 78888776 4 455
Q ss_pred HHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEEEccChhhhcccC-ccccccccCHHHHHHHHHh-------
Q 014492 240 LLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA------- 308 (423)
Q Consensus 240 l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~~------- 308 (423)
+.+||+. |+++|+||++..|...+.. ....+..+.++ +++|.++ .| +++|++++++++++.+...
T Consensus 621 l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDii---tlsK~L~-gG~~Plgav~~~~~i~~~~~~~~~~~~~~ 696 (831)
T 4a0g_A 621 LVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGCKPDIA---CFAKLLT-GGMVPLAVTLATDAVFDSFSGDSKLKALL 696 (831)
T ss_dssp HHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSSCCSEE---EECGGGG-TTSSCCEEEEECHHHHHTTCSSCGGGSCC
T ss_pred HHHHHHHcCCeEEEEcCccccccCCCchhhHhcCCCCcEE---EEecccc-cCccCcEEEEECHHHHHHHhcccccccce
Confidence 5666665 9999999999988643332 22223334433 5899997 57 7999999999999887542
Q ss_pred -cCCCCCcHHHHHHHHHHhCC---hHHHHHHH---HHHHH-HHHHHHHHHccCCCCeecCCCceEEEEEeCCC-------
Q 014492 309 -KQPYNVSVAAEVAACAALQN---PIYLEKVK---EALIK-ERERLFKLLKDVPFLNPYPSYSNFILCEVTSG------- 373 (423)
Q Consensus 309 -~~~~~~~~~~~~a~~~~l~~---~~~~~~~~---~~~~~-~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~------- 373 (423)
...|+.++++++++.++|+. +++.++.. +++++ .++.+.+.+++.+.+......|.++.+++.+.
T Consensus 697 hg~T~~g~Pla~Aaala~L~~i~~~~l~~~~~~~~~~l~~~l~~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~~~ 776 (831)
T 4a0g_A 697 HGHSYSAHAMGCATAAKAIQWFKDPETNHNITSQGKTLRELWDEELVQQISSHSAVQRVVVIGTLFALELKADASNSGYA 776 (831)
T ss_dssp CCCTTTTCHHHHHHHHHHHHHHHCTTTCTTBCTTSSBBCCCSCHHHHHHHHHSTTEEEEEEETTEEEEEEC---------
T ss_pred eecCCcccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCceeEeecccEEEEEEecCccccccc
Confidence 23467889999888887753 22222221 11111 12234455666665554456678888887421
Q ss_pred -CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014492 374 -MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM 420 (423)
Q Consensus 374 -~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~ 420 (423)
..+..+.+.|.++||++++.+ +.|||+.. +.++++++.++|+
T Consensus 777 ~~~a~~~~~~l~e~Gv~v~p~g-----~~lrl~pp~~~t~e~id~~~~~l~ 822 (831)
T 4a0g_A 777 SLYAKSLLIMLREDGIFTRPLG-----NVIYLMCGPCTSPEICRRLLTKLY 822 (831)
T ss_dssp CHHHHHHHHHHHHTTEECCCBT-----TEEEEECCTTCCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHCCcEEEecC-----CEEEEECCCCCCHHHHHHHHHHHH
Confidence 124568888999999999764 79999854 3444444444443
No 235
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.53 E-value=3.4e-12 Score=124.88 Aligned_cols=289 Identities=11% Similarity=-0.030 Sum_probs=174.5
Q ss_pred HHHHHHHHHhCCCCC-cEEEeCCHHHHHHHHHHHhcCC----CCeEEEcCCCchhhHHHHHHCCCeEEEecC---CCCCC
Q 014492 133 RLRAALAKDSGLESD-HILVGCGADELIDLIMRCVLDP----GDKIVDCPPTFTMYEFDAAVNGAAVVKVPR---KSDFS 204 (423)
Q Consensus 133 ~lr~~ia~~~g~~~~-~i~~t~G~~~al~~~~~~l~~~----gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~---~~~~~ 204 (423)
.+...+.+.+|++.. ..++++|+|.+...++...+++ ++.|+++.-+|.+....+...|+.++.++. ++.+.
T Consensus 102 ~~~~~~~~~lGlp~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kAl~l~Gl~p~~v~~~~~~~~~~ 181 (450)
T 3bc8_A 102 SLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIENVLEGDELR 181 (450)
T ss_dssp HHHHHHHHHHTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEETTEEE
T ss_pred HHHHHHHHhCCCCCCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHHHHHcCCeeEEEEeeecCccCC
Confidence 455556666798543 5688888884444444444444 899999999999999999999999998874 45678
Q ss_pred CCHHHHHHHhhcC--CceEEEEcCC-CCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCc-hh-hhhccCCcEEEE
Q 014492 205 LNVELIADAVERE--KPKCIFLTSP-NNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLES-RM-EWVKKHDNLIVL 278 (423)
Q Consensus 205 ~d~~~l~~~i~~~--~~~~i~l~~p-~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~-~~-~~~~~~~~~i~i 278 (423)
+|+++++++|++. +.+++++.+| ++.+|.+-+++++.+||+. |+++++|+||........ .. ..+....-+.++
T Consensus 182 id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l~~~a~~~~~AD~~v 261 (450)
T 3bc8_A 182 TDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGARVGRIDAFV 261 (450)
T ss_dssp CCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHHHSCCCEEE
T ss_pred cCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCchhhhhhHhHHHHHhcccCCCEEE
Confidence 9999999999753 2455555555 4556789999999999998 999999999985432111 11 111112334678
Q ss_pred ccChhhhcccCcccccccc-CHHHHHHHHHhcCCCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCC--
Q 014492 279 RTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQPYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVP-- 354 (423)
Q Consensus 279 ~S~SK~~g~~G~R~G~i~~-~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~-- 354 (423)
.|.+|.+. .....+++.. +++.++++.........+.++.......+.. .+.+++..++..++.+++.+.|++++
T Consensus 262 ~S~HK~l~-a~~~~~~l~~rd~~~~~~~~~~~~g~~s~SpsL~l~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~ 340 (450)
T 3bc8_A 262 QSLDKNFM-VPVGGAIIAGFNEPFIQDISKMYPGRASASPSLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEA 340 (450)
T ss_dssp EEHHHHHS-CCSSCEEEEESCHHHHHHHHHHSCSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ECCccCCC-chhccEEEEecCHHHHHHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHh
Confidence 89999764 4444566665 6677766654431112233333322222221 23355555555667777777776654
Q ss_pred -CCeecCCCce--EEEEEeCC-----CCCHHHHHHHHHhCC---cEEE--------------eCCC---CCCCCeEEEEe
Q 014492 355 -FLNPYPSYSN--FILCEVTS-----GMDAKKLKDDLAKMG---VMIR--------------HYNN---KELKGYVRVSV 406 (423)
Q Consensus 355 -~~~~~p~~~~--~~~~~~~~-----~~~~~~l~~~L~~~g---I~v~--------------~~~~---~~~~~~iRis~ 406 (423)
+..+.....+ -..+.+.. ..|...+.-.+...| .-+. .++. .....+|=+.+
T Consensus 341 ~g~~~l~~~~~~~~~~~~l~~~~~~~~~D~tkl~i~~~~~g~sG~~v~~~~~~~~~~~~~l~~~gi~~E~~~~~~i~~~~ 420 (450)
T 3bc8_A 341 HNERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSMLFTRQVSGARAVPLGNVQTVSGHTFRGFMSHADNYPCAYLNAAA 420 (450)
T ss_dssp TTCCBCCCTTCSSEEEEECTTTSSSSSCHHHHHHHHHHHTTCCSCEEECSCCEEEETTEEEETTTTTSSCCSSCEEEEEC
T ss_pred cCceecCCccCCCcceeecccccccccCCCceeEEEecCCCCccceeeecccccchhHHHHHHcCCeeecCCCCcEEEEe
Confidence 4444322211 11222221 235556666665544 3332 1111 12234555544
Q ss_pred c---ChhhHHHHHHHHhhh
Q 014492 407 G---KPEHTDALMECLMHL 422 (423)
Q Consensus 407 ~---~~~~~~~l~~al~~l 422 (423)
+ +.++.++|.++|+++
T Consensus 421 sig~~~~di~~l~~~L~~~ 439 (450)
T 3bc8_A 421 AIGMKMQDVDLFIKRLDKC 439 (450)
T ss_dssp CTTCCHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHH
Confidence 3 566777777777754
No 236
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.40 E-value=3.9e-12 Score=123.08 Aligned_cols=244 Identities=11% Similarity=-0.038 Sum_probs=155.6
Q ss_pred CCCC-CcEEEeCCHHHHHHHHHHHhcCC----CCeEEEcCCCchhhHHHHHHCCCeEEEecC---CCCCCCCHHHHHHHh
Q 014492 143 GLES-DHILVGCGADELIDLIMRCVLDP----GDKIVDCPPTFTMYEFDAAVNGAAVVKVPR---KSDFSLNVELIADAV 214 (423)
Q Consensus 143 g~~~-~~i~~t~G~~~al~~~~~~l~~~----gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~---~~~~~~d~~~l~~~i 214 (423)
|++. ...++++|+|.++..++.+.+++ +|.|+++.-+|-+....+...|++++.++. ++..++|++++++++
T Consensus 130 G~~~~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAliL~Gl~Pv~V~p~~d~~~~~id~e~le~aI 209 (501)
T 3hl2_A 130 GVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVLEGDELRTDLKAVEAKV 209 (501)
T ss_dssp TCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECEEEETTEEEECHHHHHHHH
T ss_pred CCCCCCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHHHHcCCeEEEEeeeecccccCCCHHHHHHHH
Confidence 8754 46899999997766666656664 499999999999999999999999999984 345789999999999
Q ss_pred hcC--CceEEEEc-CCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCcccc-CCCchh-hhhccCCcEEEEccChhhhccc
Q 014492 215 ERE--KPKCIFLT-SPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLESRM-EWVKKHDNLIVLRTFSKRAGLA 288 (423)
Q Consensus 215 ~~~--~~~~i~l~-~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~-~~~~~~-~~~~~~~~~i~i~S~SK~~g~~ 288 (423)
++. +..++++. .+.|-.|.+-+++++.+||+. |+++++|+||.... +..... ..+.....++++.|.+|.+-++
T Consensus 210 ~e~ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~GrAD~vVqS~HK~llvp 289 (501)
T 3hl2_A 210 QELGPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVP 289 (501)
T ss_dssp HHHCGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHSCCCEEEEEHHHHHCCC
T ss_pred HhcCCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcCCCcEEEecccccceee
Confidence 753 23344433 556655677899999999998 99999999998543 111111 1111122557889999987544
Q ss_pred Ccccccccc-CHHHHHHHHHhcCCCC-CcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCC---CeecCCC
Q 014492 289 GLRVGYGAF-PLSIIEYLWRAKQPYN-VSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPF---LNPYPSY 362 (423)
Q Consensus 289 G~R~G~i~~-~~~~~~~l~~~~~~~~-~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~---~~~~p~~ 362 (423)
+..|.+.. ++++++++.... +.. ...++.......+.- .+.+++..++..++.+++.+.|+++.. ..+....
T Consensus 290 -IGG~ii~~~d~e~l~~~~~~y-PGr~S~Spsldl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L~~la~~~ge~ll~~~ 367 (501)
T 3hl2_A 290 -VGGAIIAGFNDSFIQEISKMY-PGRASASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKLSEAYNERLLHTP 367 (501)
T ss_dssp -SSCEEEEESCHHHHHHHHHTS-CSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCBCCCT
T ss_pred -cCceEEEeCCHHHHHHHHHhC-CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhcCCC
Confidence 22233323 677777764432 222 222222222222221 244677788888888888888876421 2332222
Q ss_pred --ceEEEEEeCC-----CCCHHHHHHHHHhCCc
Q 014492 363 --SNFILCEVTS-----GMDAKKLKDDLAKMGV 388 (423)
Q Consensus 363 --~~~~~~~~~~-----~~~~~~l~~~L~~~gI 388 (423)
..-+.+.+.. +.+...+-..|..++|
T Consensus 368 ~n~is~a~tl~~~~~~~~~~~t~~gs~Lf~r~v 400 (501)
T 3hl2_A 368 HNPISLAMTLKTLDEHRDKAVTQLGSMLFTRQV 400 (501)
T ss_dssp TCSSEEEEECTTSCTTTSCHHHHHHHHHHHTTC
T ss_pred CCceeEEEecccccccccccHHHHHHHHHhcCC
Confidence 2233344431 1224566677766554
No 237
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=62.20 E-value=38 Score=29.97 Aligned_cols=100 Identities=14% Similarity=0.087 Sum_probs=58.0
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CC
Q 014492 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (423)
Q Consensus 144 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~ 218 (423)
++...+++|.|+...=..+...|.+.|..|++..-.-.......+..+.++..+..|- -|.+.+++.+++ .+
T Consensus 25 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv---~d~~~v~~~~~~~~~~~g~ 101 (277)
T 4dqx_A 25 LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDV---SSAKDAESMVEKTTAKWGR 101 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCT---TCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecC---CCHHHHHHHHHHHHHHcCC
Confidence 3444566666555433455666788898887765544444444444577777776542 356666655532 36
Q ss_pred ceEEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 219 PKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 219 ~~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
+..++-+.-..+.+. -.+.++++++.+.
T Consensus 102 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~v 131 (277)
T 4dqx_A 102 VDVLVNNAGFGTTGNVVTIPEETWDRIMSV 131 (277)
T ss_dssp CCEEEECCCCCCCBCTTTSCHHHHHHHHHH
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHH
Confidence 777775533333332 3567778777664
No 238
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=61.75 E-value=24 Score=31.49 Aligned_cols=129 Identities=10% Similarity=0.157 Sum_probs=72.3
Q ss_pred CcEEEeCCHHHHH-HHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CCce
Q 014492 147 DHILVGCGADELI-DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPK 220 (423)
Q Consensus 147 ~~i~~t~G~~~al-~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~ 220 (423)
.-+++|.|+. +| ..+...|.+.|-.|++..-.-......++..|.+...+..|- -|.+++++.+++ .++.
T Consensus 30 KvalVTGas~-GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv---~~~~~v~~~~~~~~~~~G~iD 105 (273)
T 4fgs_A 30 KIAVITGATS-GIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADS---ANLAELDRLYEKVKAEAGRID 105 (273)
T ss_dssp CEEEEESCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCT---TCHHHHHHHHHHHHHHHSCEE
T ss_pred CEEEEeCcCC-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecC---CCHHHHHHHHHHHHHHcCCCC
Confidence 4455555554 55 445556888998888766544455555666687777777543 355555554432 3667
Q ss_pred EEEEcCCCCCcCc--CCCHHHHHHHHcCC---CEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccC
Q 014492 221 CIFLTSPNNPDGS--IINDEDLLKILEMP---ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAG 289 (423)
Q Consensus 221 ~i~l~~p~NPtG~--~~~~~~l~~i~~~~---~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G 289 (423)
.++-+.-.++.+- -++.+++.++.+.| .+.+.-.+ .+.....+.+|.+.|.+=..+.++
T Consensus 106 iLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~----------~p~m~~~G~IInisS~~~~~~~~~ 169 (273)
T 4fgs_A 106 VLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKA----------LPLLARGSSVVLTGSTAGSTGTPA 169 (273)
T ss_dssp EEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHH----------TTTEEEEEEEEEECCGGGGSCCTT
T ss_pred EEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHH----------HHHHhhCCeEEEEeehhhccCCCC
Confidence 6665433333333 34778888888752 22221111 111223456778877654444444
No 239
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=61.66 E-value=35 Score=29.57 Aligned_cols=97 Identities=11% Similarity=0.036 Sum_probs=57.5
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CCceE
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKC 221 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~ 221 (423)
..+++|.|+...=..+.+.|.+.|..|++..-.-.......+..|.++..+..|- -|.+.+++.+++ .++..
T Consensus 7 k~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv---~~~~~v~~~~~~~~~~~g~id~ 83 (247)
T 3rwb_A 7 KTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADI---SDPGSVKALFAEIQALTGGIDI 83 (247)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCT---TCHHHHHHHHHHHHHHHSCCSE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCC---CCHHHHHHHHHHHHHHCCCCCE
Confidence 4566665554333455566788898888766555444455555577777776543 355666655532 36777
Q ss_pred EEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 222 IFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 222 i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
++-+.-..+.+. -.+.+++++..+.
T Consensus 84 lv~nAg~~~~~~~~~~~~~~~~~~~~~ 110 (247)
T 3rwb_A 84 LVNNASIVPFVAWDDVDLDHWRKIIDV 110 (247)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 776533333332 3467777777664
No 240
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=60.36 E-value=42 Score=29.58 Aligned_cols=102 Identities=13% Similarity=0.035 Sum_probs=58.5
Q ss_pred hCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHH---HHHHCCCeEEEecCCCCCCCCHHHHHHHhhc--
Q 014492 142 SGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF---DAAVNGAAVVKVPRKSDFSLNVELIADAVER-- 216 (423)
Q Consensus 142 ~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-- 216 (423)
|.++-..+++|.|+...=..+...|.+.|-.|++..-.-..... ..+..|.++..+..|-. |.+++++.+++
T Consensus 5 f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~---~~~~v~~~~~~~~ 81 (255)
T 4g81_D 5 FDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVT---DELAIEAAFSKLD 81 (255)
T ss_dssp TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTT---CHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCC---CHHHHHHHHHHHH
Confidence 45554455665555433344556678899888886654332222 23446888888876533 45555544432
Q ss_pred ---CCceEEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 217 ---EKPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 217 ---~~~~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
.++..++-+--.++.+. -++.++++++.+.
T Consensus 82 ~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~v 116 (255)
T 4g81_D 82 AEGIHVDILINNAGIQYRKPMVELELENWQKVIDT 116 (255)
T ss_dssp HTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 35776664432333333 3577888888775
No 241
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=57.43 E-value=29 Score=30.22 Aligned_cols=98 Identities=15% Similarity=0.113 Sum_probs=56.2
Q ss_pred CCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CCce
Q 014492 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPK 220 (423)
Q Consensus 146 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~ 220 (423)
...+++|.|+...=..+.+.|.+.|..|++..-.-.......+..+.++..+..|- -|.+.+++.+++ .++.
T Consensus 9 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~g~id 85 (261)
T 3n74_A 9 GKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADI---SKEADVDAAVEAALSKFGKVD 85 (261)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCT---TSHHHHHHHHHHHHHHHSCCC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecC---CCHHHHHHHHHHHHHhcCCCC
Confidence 34566666655433455666788898887766554444555555566777776543 245555554432 3677
Q ss_pred EEEEcCC-CCCcCc--CCCHHHHHHHHcC
Q 014492 221 CIFLTSP-NNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 221 ~i~l~~p-~NPtG~--~~~~~~l~~i~~~ 246 (423)
.++-+.- ..+.+. ..+.+++.+..+.
T Consensus 86 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~ 114 (261)
T 3n74_A 86 ILVNNAGIGHKPQNAELVEPEEFDRIVGV 114 (261)
T ss_dssp EEEECCCCCCCSCCGGGSCHHHHHHHHHH
T ss_pred EEEECCccCCCCCCcccCCHHHHHHHHHH
Confidence 7775522 222222 2477777777664
No 242
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=55.98 E-value=54 Score=28.78 Aligned_cols=97 Identities=11% Similarity=0.110 Sum_probs=55.4
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CCceE
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKC 221 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~ 221 (423)
..+++|.|+...=..+...|.+.|..|++..-.-..........+.++..+..| --|.+.+++.+.+ .++..
T Consensus 6 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D---v~~~~~~~~~~~~~~~~~g~id~ 82 (281)
T 3m1a_A 6 KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLD---VTDGERIDVVAADVLARYGRVDV 82 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECC---TTCHHHHHHHHHHHHHHHSCCSE
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEee---CCCHHHHHHHHHHHHHhCCCCCE
Confidence 345555554433344556678889888776655555555555566666666643 2355666655532 36777
Q ss_pred EEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 222 IFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 222 i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
++-+....+.+. -.+.+++.+..+.
T Consensus 83 lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 109 (281)
T 3m1a_A 83 LVNNAGRTQVGAFEETTERELRDLFEL 109 (281)
T ss_dssp EEECCCCEEECCTTTCCHHHHHHHHHH
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHHH
Confidence 775533332332 3466777766654
No 243
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=55.13 E-value=55 Score=28.40 Aligned_cols=97 Identities=13% Similarity=0.059 Sum_probs=55.5
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CCceE
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKC 221 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~ 221 (423)
..+++|.|+...=..+.+.|.+.|..|++..-.-.......+..+.++..+..|- -|.+.+++.+++ .++..
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~---~~~~~v~~~~~~~~~~~g~id~ 85 (259)
T 4e6p_A 9 KSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDV---TRQDSIDAAIAATVEHAGGLDI 85 (259)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCT---TCHHHHHHHHHHHHHHSSSCCE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeC---CCHHHHHHHHHHHHHHcCCCCE
Confidence 4566766655444455666888898887765544444444444566666666442 356666655532 26777
Q ss_pred EEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 222 IFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 222 i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
++-+.-..+.+. -.+.+++.+..+.
T Consensus 86 lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 112 (259)
T 4e6p_A 86 LVNNAALFDLAPIVEITRESYEKLFAI 112 (259)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHH
Confidence 775533222222 3467777776664
No 244
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=53.10 E-value=62 Score=28.40 Aligned_cols=98 Identities=14% Similarity=0.070 Sum_probs=54.4
Q ss_pred CCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc----CCceE
Q 014492 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER----EKPKC 221 (423)
Q Consensus 146 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~----~~~~~ 221 (423)
...+++|.|+...=..+...|.+.|..|++..-.-.......+..+.++..+..|- -|.+.+++.++. .++..
T Consensus 30 ~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl---~~~~~v~~~~~~~~~~~~id~ 106 (281)
T 3ppi_A 30 GASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNV---TSEDSVLAAIEAANQLGRLRY 106 (281)
T ss_dssp TEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCT---TCHHHHHHHHHHHTTSSEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCC---CCHHHHHHHHHHHHHhCCCCe
Confidence 34566666555433455666788898887765544444444555566777776543 345555554432 24555
Q ss_pred EEEc-CCCCCcC-------cCCCHHHHHHHHcC
Q 014492 222 IFLT-SPNNPDG-------SIINDEDLLKILEM 246 (423)
Q Consensus 222 i~l~-~p~NPtG-------~~~~~~~l~~i~~~ 246 (423)
++.+ ....+.+ ...+.+++.+..+.
T Consensus 107 lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (281)
T 3ppi_A 107 AVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDL 139 (281)
T ss_dssp EEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHH
T ss_pred EEEccCcccccccccccccccCCHHHHHHHHHH
Confidence 6554 2222222 24566777766654
No 245
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=51.71 E-value=36 Score=30.28 Aligned_cols=79 Identities=8% Similarity=0.015 Sum_probs=48.2
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcC-CceEE
Q 014492 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-KPKCI 222 (423)
Q Consensus 144 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-~~~~i 222 (423)
++...+++|.|+...=..+.+.|.+.|..|++..-.-.......+..+.++..+..| --|.+.+++.+++- ++..+
T Consensus 14 l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D---l~d~~~v~~~~~~~~~iD~l 90 (291)
T 3rd5_A 14 FAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELD---LQDLSSVRRFADGVSGADVL 90 (291)
T ss_dssp CTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECC---TTCHHHHHHHHHTCCCEEEE
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcC---CCCHHHHHHHHHhcCCCCEE
Confidence 334566776666544455566678889888776544444444444456677777654 23677887777642 56666
Q ss_pred EEc
Q 014492 223 FLT 225 (423)
Q Consensus 223 ~l~ 225 (423)
+-+
T Consensus 91 v~n 93 (291)
T 3rd5_A 91 INN 93 (291)
T ss_dssp EEC
T ss_pred EEC
Confidence 644
No 246
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=51.48 E-value=57 Score=28.66 Aligned_cols=96 Identities=13% Similarity=0.066 Sum_probs=55.7
Q ss_pred CcEEEeCCHHHHHHH-HHHHhcCCCCeEEEcCCCchhhH---HHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----C
Q 014492 147 DHILVGCGADELIDL-IMRCVLDPGDKIVDCPPTFTMYE---FDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----E 217 (423)
Q Consensus 147 ~~i~~t~G~~~al~~-~~~~l~~~gd~Vl~~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~ 217 (423)
..+++|.|+ .+|.. +...|.+.|-.|++..-.-.... ...+..|.++..+..|-. |.+++++.+++ .
T Consensus 8 KvalVTGas-~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt---~~~~v~~~~~~~~~~~G 83 (254)
T 4fn4_A 8 KVVIVTGAG-SGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVS---KKKDVEEFVRRTFETYS 83 (254)
T ss_dssp CEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT---SHHHHHHHHHHHHHHHS
T ss_pred CEEEEeCCC-CHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCC---CHHHHHHHHHHHHHHcC
Confidence 445555544 45544 44557788988877654433222 223446888888886533 55666555432 4
Q ss_pred CceEEEEcCC-CCCcCc--CCCHHHHHHHHcC
Q 014492 218 KPKCIFLTSP-NNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 218 ~~~~i~l~~p-~NPtG~--~~~~~~l~~i~~~ 246 (423)
++..++-+-- ..+.+. -++.+++.++.+.
T Consensus 84 ~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~v 115 (254)
T 4fn4_A 84 RIDVLCNNAGIMDGVTPVAEVSDELWERVLAV 115 (254)
T ss_dssp CCCEEEECCCCCCTTCCGGGCCHHHHHHHHHH
T ss_pred CCCEEEECCcccCCCCChhhCCHHHHHHHHHH
Confidence 6776663321 333342 3678888888875
No 247
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=49.80 E-value=81 Score=27.46 Aligned_cols=99 Identities=10% Similarity=0.037 Sum_probs=50.5
Q ss_pred CCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----C
Q 014492 143 GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----E 217 (423)
Q Consensus 143 g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~ 217 (423)
.++...+++|.|+...=..+...|.+.|..|++..-.-.......+..++..+..+. -|.+.+++.+++ .
T Consensus 24 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g 98 (260)
T 3gem_A 24 TLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDF-----SCETGIMAFIDLLKTQTS 98 (260)
T ss_dssp ---CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCT-----TSHHHHHHHHHHHHHHCS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCC-----CCHHHHHHHHHHHHHhcC
Confidence 344456777666554434555667788877766543333333333445655554432 245555555432 3
Q ss_pred CceEEEEcCC-CCCcCcCCCHHHHHHHHcC
Q 014492 218 KPKCIFLTSP-NNPDGSIINDEDLLKILEM 246 (423)
Q Consensus 218 ~~~~i~l~~p-~NPtG~~~~~~~l~~i~~~ 246 (423)
++..++-+.- ..+.....+.+++.+..+.
T Consensus 99 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~v 128 (260)
T 3gem_A 99 SLRAVVHNASEWLAETPGEEADNFTRMFSV 128 (260)
T ss_dssp CCSEEEECCCCCCCCCTTCHHHHHHHHHHH
T ss_pred CCCEEEECCCccCCCCCCCCHHHHHHHHHH
Confidence 6777775522 2222233455666666654
No 248
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=49.73 E-value=44 Score=29.07 Aligned_cols=98 Identities=8% Similarity=0.012 Sum_probs=55.7
Q ss_pred CCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CCce
Q 014492 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPK 220 (423)
Q Consensus 146 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~ 220 (423)
...+++|.|+...=..+.+.|.+.|..|++..-.-.......+..|.++..+..|- -|.+.+++.++. .++.
T Consensus 8 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv---~~~~~v~~~~~~~~~~~g~id 84 (255)
T 4eso_A 8 GKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDI---ADLNEIAVLGAAAGQTLGAID 84 (255)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCT---TCHHHHHHHHHHHHHHHSSEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccC---CCHHHHHHHHHHHHHHhCCCC
Confidence 34566766665444555666788898887765544444444444566777776542 355655554432 3567
Q ss_pred EEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 221 CIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 221 ~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
.++-+.-..+.+. -.+.+++.+..+.
T Consensus 85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 112 (255)
T 4eso_A 85 LLHINAGVSELEPFDQVSEASYDRQFAV 112 (255)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 6665432222222 2367777777664
No 249
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=49.18 E-value=1e+02 Score=26.54 Aligned_cols=100 Identities=14% Similarity=0.046 Sum_probs=53.3
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CC
Q 014492 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (423)
Q Consensus 144 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~ 218 (423)
.+...+++|.|+...=..+...|.+.|..|++..-.-.......+..+.++..+..|- -|.+.+++.+++ .+
T Consensus 10 ~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~---~~~~~v~~~~~~~~~~~g~ 86 (265)
T 2o23_A 10 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADV---TSEKDVQTALALAKGKFGR 86 (265)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCT---TCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCC---CCHHHHHHHHHHHHHHCCC
Confidence 3334566766554433455666778887777654333333333343465666666442 355666655532 26
Q ss_pred ceEEEEcCCCCCcCc--------CCCHHHHHHHHcC
Q 014492 219 PKCIFLTSPNNPDGS--------IINDEDLLKILEM 246 (423)
Q Consensus 219 ~~~i~l~~p~NPtG~--------~~~~~~l~~i~~~ 246 (423)
+.+||-+.-....+. ..+.+++.+..+.
T Consensus 87 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (265)
T 2o23_A 87 VDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDV 122 (265)
T ss_dssp CCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHH
T ss_pred CCEEEECCccCCCCccccccccCCCCHHHHHHHHHH
Confidence 777775532222221 1466777666554
No 250
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=47.93 E-value=52 Score=28.86 Aligned_cols=101 Identities=19% Similarity=0.130 Sum_probs=55.8
Q ss_pred CCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----C
Q 014492 143 GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----E 217 (423)
Q Consensus 143 g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~ 217 (423)
.++...+++|.|+...=..+.+.|.+.|..|++..-.-.......+..|.++..+..|- -|.+.+++.+++ .
T Consensus 24 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv---~d~~~v~~~~~~~~~~~g 100 (266)
T 3grp_A 24 KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANL---SDRKSIKQLAEVAEREME 100 (266)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCT---TSHHHHHHHHHHHHHHHT
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeec---CCHHHHHHHHHHHHHHcC
Confidence 44445666666554433455566788898887765444444455555677777777543 355666555532 3
Q ss_pred CceEEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 218 KPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 218 ~~~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
++..++-+.-....+. -.+.+++.+..+.
T Consensus 101 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~v 131 (266)
T 3grp_A 101 GIDILVNNAGITRDGLFVRMQDQDWDDVLAV 131 (266)
T ss_dssp SCCEEEECCCCC-----CCCHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 6777775532222222 2355666666554
No 251
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=47.88 E-value=59 Score=28.56 Aligned_cols=97 Identities=10% Similarity=0.072 Sum_probs=54.5
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCC------------ch---hhHHHHHHCCCeEEEecCCCCCCCCHHHHH
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPT------------FT---MYEFDAAVNGAAVVKVPRKSDFSLNVELIA 211 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~------------y~---~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~ 211 (423)
..+++|.|+...=..+...|.+.|..|++..-. -. ......+..|.++..+..|- -|.+.++
T Consensus 11 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~v~ 87 (287)
T 3pxx_A 11 KVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDV---RDRAAVS 87 (287)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCT---TCHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccC---CCHHHHH
Confidence 456666665543345566678889887764322 11 11122334577777777543 3566665
Q ss_pred HHhhc-----CCceEEEEcCCCCCcCcCCCHHHHHHHHcC
Q 014492 212 DAVER-----EKPKCIFLTSPNNPDGSIINDEDLLKILEM 246 (423)
Q Consensus 212 ~~i~~-----~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~ 246 (423)
+.+.+ .++..++-+.-..+.+...+.+++.+..+.
T Consensus 88 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~ 127 (287)
T 3pxx_A 88 RELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDV 127 (287)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhh
Confidence 55432 367777765333333344677788777664
No 252
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=47.73 E-value=38 Score=28.81 Aligned_cols=96 Identities=10% Similarity=0.025 Sum_probs=53.6
Q ss_pred cEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc--CCceEEEEc
Q 014492 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER--EKPKCIFLT 225 (423)
Q Consensus 148 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~--~~~~~i~l~ 225 (423)
.+++|.|+...=..+...|.+.|..|++..-.-.......+..+.++..+..| --|.+.+++.+.+ .....++-+
T Consensus 3 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D---~~~~~~v~~~~~~~~~~~d~lv~~ 79 (230)
T 3guy_A 3 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARD---LASHQEVEQLFEQLDSIPSTVVHS 79 (230)
T ss_dssp CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECC---TTCHHHHHHHHHSCSSCCSEEEEC
T ss_pred EEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeec---CCCHHHHHHHHHHHhhcCCEEEEe
Confidence 46666666544445556677888878776555444445555555555555543 2356777776653 223555544
Q ss_pred CCCCCcCc--CCCHHHHHHHHcC
Q 014492 226 SPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 226 ~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
....+.+. -.+.+++.+..+.
T Consensus 80 Ag~~~~~~~~~~~~~~~~~~~~~ 102 (230)
T 3guy_A 80 AGSGYFGLLQEQDPEQIQTLIEN 102 (230)
T ss_dssp CCCCCCSCGGGSCHHHHHHHHHH
T ss_pred CCcCCCCccccCCHHHHHHHHHH
Confidence 32222332 3467777776664
No 253
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=47.68 E-value=47 Score=28.80 Aligned_cols=98 Identities=15% Similarity=0.049 Sum_probs=47.7
Q ss_pred CCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CCce
Q 014492 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPK 220 (423)
Q Consensus 146 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~ 220 (423)
...+++|.|+...=..+...|.+.|..|++..-.-.......+..+.++..+..| --|.+.+++.+++ .++.
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D---v~~~~~v~~~~~~~~~~~g~id 83 (257)
T 3tpc_A 7 SRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNAD---VTNEADATAALAFAKQEFGHVH 83 (257)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECC---TTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcc---CCCHHHHHHHHHHHHHHcCCCC
Confidence 3456666655443345556678889888765544333333333345555555543 2355666555532 3677
Q ss_pred EEEEcCCCCCcCc------CCCHHHHHHHHcC
Q 014492 221 CIFLTSPNNPDGS------IINDEDLLKILEM 246 (423)
Q Consensus 221 ~i~l~~p~NPtG~------~~~~~~l~~i~~~ 246 (423)
.++-+.-..+.+. ..+.+++.+..+.
T Consensus 84 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~v 115 (257)
T 3tpc_A 84 GLVNCAGTAPGEKILGRSGPHALDSFARTVAV 115 (257)
T ss_dssp EEEECCCCCCCCCSEETTEECCHHHHHHHHHH
T ss_pred EEEECCCCCCCCccccccccCCHHHHHHHHHH
Confidence 7775522222222 2567777777664
No 254
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=47.60 E-value=79 Score=28.89 Aligned_cols=80 Identities=21% Similarity=0.096 Sum_probs=50.5
Q ss_pred cCCCCeEEEcCCCch-------hhH---HHHHHCCCeEEEecC--C-CC-CC-CC---HHHHHHHhhcCCceEEEEcCCC
Q 014492 167 LDPGDKIVDCPPTFT-------MYE---FDAAVNGAAVVKVPR--K-SD-FS-LN---VELIADAVEREKPKCIFLTSPN 228 (423)
Q Consensus 167 ~~~gd~Vl~~~p~y~-------~~~---~~~~~~g~~~~~v~~--~-~~-~~-~d---~~~l~~~i~~~~~~~i~l~~p~ 228 (423)
+++||+|-+.+|+.+ .+. ...+..|.+++.-+. . .+ +. -| .++|.+++.++.+++|+...--
T Consensus 9 L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rGG 88 (327)
T 4h1h_A 9 LKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVIGG 88 (327)
T ss_dssp CCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCCC
T ss_pred CCCCCEEEEEeCCCCcCccCHHHHHHHHHHHHhCCCEEEECcchhhccCcccCCHHHHHHHHHHHhhCCCCCEEEEcCCc
Confidence 578999999988753 122 234558999988772 1 11 11 12 4567777777889999977555
Q ss_pred CCcCcCCCHHHHHHHHcC
Q 014492 229 NPDGSIINDEDLLKILEM 246 (423)
Q Consensus 229 NPtG~~~~~~~l~~i~~~ 246 (423)
.-+-.+++.=+...|.+.
T Consensus 89 ~g~~rlL~~LD~~~i~~~ 106 (327)
T 4h1h_A 89 FNSNQLLPYLDYDLISEN 106 (327)
T ss_dssp SCGGGGGGGCCHHHHHHS
T ss_pred hhHHHHhhhcchhhhccC
Confidence 545566655445555554
No 255
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=47.20 E-value=47 Score=29.38 Aligned_cols=97 Identities=11% Similarity=0.024 Sum_probs=53.9
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CCceE
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKC 221 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~ 221 (423)
..+++|.|+...=..+...|.+.|..|++..-.-.......+..+.++..+..|- -|.+.+++.+++ .++..
T Consensus 30 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv---~d~~~v~~~~~~~~~~~g~iD~ 106 (277)
T 3gvc_A 30 KVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDV---SDEQQIIAMVDACVAAFGGVDK 106 (277)
T ss_dssp CEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCT---TCHHHHHHHHHHHHHHHSSCCE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecC---CCHHHHHHHHHHHHHHcCCCCE
Confidence 4455555554333445556788898887765544444444444566666666432 355665555432 36777
Q ss_pred EEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 222 IFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 222 i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
++-+.-..+.+. -.+.+++.+..+.
T Consensus 107 lvnnAg~~~~~~~~~~~~~~~~~~~~v 133 (277)
T 3gvc_A 107 LVANAGVVHLASLIDTTVEDFDRVIAI 133 (277)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 775532222222 3467777777664
No 256
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=46.35 E-value=68 Score=27.78 Aligned_cols=100 Identities=11% Similarity=0.048 Sum_probs=55.4
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHH---HHHHCCCeEEEecCCCCCCCCHHHHHHHhhc----
Q 014492 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF---DAAVNGAAVVKVPRKSDFSLNVELIADAVER---- 216 (423)
Q Consensus 144 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---- 216 (423)
++...+++|.|+...=..+.+.|.+.|..|++..-.-..... ..+..|.++..+..|- -|.+.+++.+++
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv---~d~~~v~~~~~~~~~~ 86 (256)
T 3gaf_A 10 LNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNV---TDEQHREAVIKAALDQ 86 (256)
T ss_dssp CTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCT---TCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCC---CCHHHHHHHHHHHHHH
Confidence 333456666555433345556677889888776544332222 2234577777777543 355665555432
Q ss_pred -CCceEEEEcCC-CCCcCcCCCHHHHHHHHcC
Q 014492 217 -EKPKCIFLTSP-NNPDGSIINDEDLLKILEM 246 (423)
Q Consensus 217 -~~~~~i~l~~p-~NPtG~~~~~~~l~~i~~~ 246 (423)
.++..++-+-- ..+...-.+.+++.+..+.
T Consensus 87 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~v 118 (256)
T 3gaf_A 87 FGKITVLVNNAGGGGPKPFDMPMSDFEWAFKL 118 (256)
T ss_dssp HSCCCEEEECCCCCCCCCTTCCHHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCCCCCHHHHHHHHHH
Confidence 36777775522 2222224677777777664
No 257
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=46.27 E-value=1.1e+02 Score=25.71 Aligned_cols=96 Identities=10% Similarity=0.086 Sum_probs=55.2
Q ss_pred cEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHH----HHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CC
Q 014492 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (423)
Q Consensus 148 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~ 218 (423)
.+++|.|+...=..+.+.|.+.|..|++....-....... +..|.++..+..| --|.+.+++.+++ .+
T Consensus 4 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D---~~~~~~v~~~~~~~~~~~g~ 80 (235)
T 3l77_A 4 VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLD---VSKAESVEEFSKKVLERFGD 80 (235)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECC---TTCHHHHHHHCC-HHHHHSS
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEec---cCCHHHHHHHHHHHHHhcCC
Confidence 4666666554334556667888988877654443322222 2357777777754 2367777776642 36
Q ss_pred ceEEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 219 PKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 219 ~~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
+..++-+....+.+. -.+.+++.+..+.
T Consensus 81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 110 (235)
T 3l77_A 81 VDVVVANAGLGYFKRLEELSEEEFHEMIEV 110 (235)
T ss_dssp CSEEEECCCCCCCCCTTTSCHHHHHHHHHH
T ss_pred CCEEEECCccccccCcccCCHHHHHHHHHH
Confidence 777776533333333 2367777777664
No 258
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=46.18 E-value=1.4e+02 Score=25.66 Aligned_cols=97 Identities=12% Similarity=0.052 Sum_probs=54.0
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHH---HHHHCCCeEEEecCCCCCCCCHHHHHHHhhc----CCc
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF---DAAVNGAAVVKVPRKSDFSLNVELIADAVER----EKP 219 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~----~~~ 219 (423)
..+++|.|+...=..+...|.+.|..|++..-.-..... ..+..|.++..+..|- -|.+.+++.++. .++
T Consensus 8 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv---~~~~~v~~~~~~~~~~g~i 84 (252)
T 3h7a_A 8 ATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDA---RNEDEVTAFLNAADAHAPL 84 (252)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCT---TCHHHHHHHHHHHHHHSCE
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcC---CCHHHHHHHHHHHHhhCCc
Confidence 456666655544345556678889888766544433332 2333577888877643 355666555432 356
Q ss_pred eEEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 220 KCIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 220 ~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
..++-+.-....+. -.+.+++.+..+.
T Consensus 85 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 113 (252)
T 3h7a_A 85 EVTIFNVGANVNFPILETTDRVFRKVWEM 113 (252)
T ss_dssp EEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred eEEEECCCcCCCCCcccCCHHHHHHHHHH
Confidence 66665432222222 3567777776664
No 259
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=45.78 E-value=1.3e+02 Score=26.15 Aligned_cols=105 Identities=10% Similarity=0.003 Sum_probs=54.5
Q ss_pred hCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHH----HCCCeEEEecCCCCCCCCHHHHHHHhhc-
Q 014492 142 SGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA----VNGAAVVKVPRKSDFSLNVELIADAVER- 216 (423)
Q Consensus 142 ~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~v~~~~~~~~d~~~l~~~i~~- 216 (423)
+.++...+++|.|+...=..+...|.+.|..|++..-.-.......+ ..|.++..+..|-...-+++++.+.+.+
T Consensus 16 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 95 (266)
T 4egf_A 16 LRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEA 95 (266)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 34444556665555433344556678889888766544332222221 1467777777553322234444333321
Q ss_pred -CCceEEEEcCCCCCcC--cCCCHHHHHHHHcC
Q 014492 217 -EKPKCIFLTSPNNPDG--SIINDEDLLKILEM 246 (423)
Q Consensus 217 -~~~~~i~l~~p~NPtG--~~~~~~~l~~i~~~ 246 (423)
.++..++-+.-....+ .-.+.+++.+..+.
T Consensus 96 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 128 (266)
T 4egf_A 96 FGGLDVLVNNAGISHPQPVVDTDPQLFDATIAV 128 (266)
T ss_dssp HTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHH
T ss_pred cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHH
Confidence 3677777653222222 23467777776664
No 260
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=45.03 E-value=80 Score=27.73 Aligned_cols=95 Identities=12% Similarity=0.134 Sum_probs=52.5
Q ss_pred cEEEeCCHHHHHH-HHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CCceE
Q 014492 148 HILVGCGADELID-LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKC 221 (423)
Q Consensus 148 ~i~~t~G~~~al~-~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~ 221 (423)
.+++| |++.+|. .+...|.+.|..|++..-.-.......+..+.++..+..|- -|.+.+++.+++ .++..
T Consensus 30 ~~lVT-Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv---~d~~~v~~~~~~~~~~~g~iD~ 105 (272)
T 4dyv_A 30 IAIVT-GAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDV---TDPDSVRALFTATVEKFGRVDV 105 (272)
T ss_dssp EEEET-TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCT---TSHHHHHHHHHHHHHHHSCCCE
T ss_pred EEEEe-CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecC---CCHHHHHHHHHHHHHHcCCCCE
Confidence 44555 4444554 44556778898887765444444444444555666665432 355666555532 36777
Q ss_pred EEEcCC-CCCcCc--CCCHHHHHHHHcC
Q 014492 222 IFLTSP-NNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 222 i~l~~p-~NPtG~--~~~~~~l~~i~~~ 246 (423)
++-+.- ..+.+. -.+.+++.+..+.
T Consensus 106 lVnnAg~~~~~~~~~~~~~~~~~~~~~v 133 (272)
T 4dyv_A 106 LFNNAGTGAPAIPMEDLTFAQWKQVVDT 133 (272)
T ss_dssp EEECCCCCCCSSCGGGCCHHHHHHHHHH
T ss_pred EEECCCCCCCCCChhhCCHHHHHHHHHh
Confidence 775522 222222 3467777777664
No 261
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=44.79 E-value=48 Score=28.66 Aligned_cols=100 Identities=15% Similarity=0.118 Sum_probs=54.3
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CC
Q 014492 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (423)
Q Consensus 144 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~ 218 (423)
++...+++|.|+...=..+.+.|.+.|..|++..-.-.......+..+.+...+..| --|.+++++.+++ .+
T Consensus 7 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D---v~d~~~v~~~~~~~~~~~g~ 83 (248)
T 3op4_A 7 LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALN---VTNPESIEAVLKAITDEFGG 83 (248)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECC---TTCHHHHHHHHHHHHHHHCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEe---CCCHHHHHHHHHHHHHHcCC
Confidence 334456666655433344556678889888776544433344444444445555543 2355666655532 36
Q ss_pred ceEEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 219 PKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 219 ~~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
+..++-+.-..+.+. -.+.+++.+..+.
T Consensus 84 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~v 113 (248)
T 3op4_A 84 VDILVNNAGITRDNLLMRMKEEEWSDIMET 113 (248)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 777775532222222 3467777777664
No 262
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=44.58 E-value=1e+02 Score=27.02 Aligned_cols=102 Identities=11% Similarity=0.043 Sum_probs=54.1
Q ss_pred hCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCch--hhHHHHHHCCCeEEEecCCCCCCCCHHHHHHH---hhc
Q 014492 142 SGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRKSDFSLNVELIADA---VER 216 (423)
Q Consensus 142 ~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~--~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~---i~~ 216 (423)
+.++...+++|.|+...=..+...|.+.|..|++..-.-. .........|.++..+..|-. |.+.+++. +.+
T Consensus 27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~---d~~~v~~~~~~~~~ 103 (273)
T 3uf0_A 27 FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLA---DLEGAANVAEELAA 103 (273)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTT---CHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCC---CHHHHHHHHHHHHh
Confidence 3444456667666554434556667888988776553221 111222335777777775432 44444443 221
Q ss_pred -CCceEEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 217 -EKPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 217 -~~~~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
.++..++-+.-....+. -.+.+++.+..+.
T Consensus 104 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~v 136 (273)
T 3uf0_A 104 TRRVDVLVNNAGIIARAPAEEVSLGRWREVLTV 136 (273)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred cCCCcEEEECCCCCCCCCchhCCHHHHHHHHHH
Confidence 36777775522222222 3467777777664
No 263
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=43.82 E-value=55 Score=28.00 Aligned_cols=96 Identities=15% Similarity=0.212 Sum_probs=51.3
Q ss_pred cEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CCceEE
Q 014492 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKCI 222 (423)
Q Consensus 148 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~i 222 (423)
.+++|.|+...=..+...|.+.|..|++..-.-.......+..+.++..+..|- -|.+.+++.+++ .++..+
T Consensus 5 ~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~---~~~~~v~~~~~~~~~~~g~id~l 81 (235)
T 3l6e_A 5 HIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADL---AHHEDVDVAFAAAVEWGGLPELV 81 (235)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCT---TSHHHHHHHHHHHHHHHCSCSEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCC---CCHHHHHHHHHHHHHhcCCCcEE
Confidence 456665554333445556778898887765544444444333344566665442 245565555432 367777
Q ss_pred EEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 223 FLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 223 ~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
+-+.-..+.+. -.+.+++.+..+.
T Consensus 82 vnnAg~~~~~~~~~~~~~~~~~~~~~ 107 (235)
T 3l6e_A 82 LHCAGTGEFGPVGVYTAEQIRRVMES 107 (235)
T ss_dssp EEECCCC------CCCHHHHHHHHHH
T ss_pred EECCCCCCCCChHhCCHHHHHHHHHH
Confidence 75533332222 3467777777664
No 264
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=42.91 E-value=1.4e+02 Score=26.53 Aligned_cols=73 Identities=18% Similarity=0.143 Sum_probs=45.8
Q ss_pred CCCeEEEcCCCchhhHHHHHHCCCeEEEec-CCCCCCCCHHHHH---HHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHH
Q 014492 169 PGDKIVDCPPTFTMYEFDAAVNGAAVVKVP-RKSDFSLNVELIA---DAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL 244 (423)
Q Consensus 169 ~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~-~~~~~~~d~~~l~---~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~ 244 (423)
++..+++..|.|. ..++.+|.+.+.+. ..++..+.+.+|. +.+++.++++|+...-.++ .-.+.|+
T Consensus 178 ~~~~~v~~H~af~---Yf~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~~~la 247 (286)
T 3gi1_A 178 RSKTFVTQHTAFS---YLAKRFGLKQLGISGISPEQEPSPRQLKEIQDFVKEYNVKTIFAEDNVNP-------KIAHAIA 247 (286)
T ss_dssp SCCEEEEEESCCH---HHHHHTTCEEEEEECSCC---CCHHHHHHHHHHHHHTTCCEEEECTTSCT-------HHHHHHH
T ss_pred CCCEEEEECCchH---HHHHHCCCeEeeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh-------HHHHHHH
Confidence 4677877666554 56678999998876 3334456555555 4556688999987633332 4456777
Q ss_pred cC-CCEEE
Q 014492 245 EM-PILVV 251 (423)
Q Consensus 245 ~~-~~~li 251 (423)
+. |+.++
T Consensus 248 ~~~g~~v~ 255 (286)
T 3gi1_A 248 KSTGAKVK 255 (286)
T ss_dssp HTTTCEEE
T ss_pred HHhCCeEE
Confidence 76 77655
No 265
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=42.91 E-value=1.3e+02 Score=25.71 Aligned_cols=97 Identities=13% Similarity=0.001 Sum_probs=52.1
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCc-hhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CCce
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF-TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPK 220 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y-~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~ 220 (423)
..+++|.|+...=..+...|.+.|..|++..-.- .......+..|.++..++.|- -|.+.+++.+++ .++.
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv---~~~~~v~~~~~~~~~~~g~id 84 (249)
T 2ew8_A 8 KLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDV---SQPGDVEAFGKQVISTFGRCD 84 (249)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCT---TCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeec---CCHHHHHHHHHHHHHHcCCCC
Confidence 3566665554433455566778888777643322 222223344566777766542 255666655431 3677
Q ss_pred EEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 221 CIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 221 ~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
.++-+.-..+.+. -.+.+++.+..+.
T Consensus 85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 112 (249)
T 2ew8_A 85 ILVNNAGIYPLIPFDELTFEQWKKTFEI 112 (249)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 7775532222222 2466777776664
No 266
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=42.53 E-value=90 Score=26.67 Aligned_cols=77 Identities=9% Similarity=0.007 Sum_probs=44.2
Q ss_pred CCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcC-CceEEEE
Q 014492 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-KPKCIFL 224 (423)
Q Consensus 146 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-~~~~i~l 224 (423)
...|++|.|+...=..+...|.+.|..|++..-.-.......+..+.++..+..| .-|.+.+++.+++. ++..++-
T Consensus 14 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D---~~~~~~~~~~~~~~~~id~li~ 90 (249)
T 3f9i_A 14 GKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCN---LANKEECSNLISKTSNLDILVC 90 (249)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECC---TTSHHHHHHHHHTCSCCSEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcC---CCCHHHHHHHHHhcCCCCEEEE
Confidence 3456666655443344556678889888776554444444444444455444433 23567777777532 5677765
Q ss_pred c
Q 014492 225 T 225 (423)
Q Consensus 225 ~ 225 (423)
+
T Consensus 91 ~ 91 (249)
T 3f9i_A 91 N 91 (249)
T ss_dssp C
T ss_pred C
Confidence 4
No 267
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=41.74 E-value=1.6e+02 Score=25.78 Aligned_cols=26 Identities=8% Similarity=-0.001 Sum_probs=12.2
Q ss_pred CeEEEcCCCch---hhHHHHHHCCCeEEE
Q 014492 171 DKIVDCPPTFT---MYEFDAAVNGAAVVK 196 (423)
Q Consensus 171 d~Vl~~~p~y~---~~~~~~~~~g~~~~~ 196 (423)
|.+++++--+. .+...++.+|..++.
T Consensus 118 dG~IipDLP~eE~~~~~~~~~~~Gl~~I~ 146 (252)
T 3tha_A 118 CALIVPELSFEESDDLIKECERYNIALIT 146 (252)
T ss_dssp EEEECTTCCGGGCHHHHHHHHHTTCEECE
T ss_pred CEEEeCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 55555443332 344444555555544
No 268
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=41.00 E-value=1.1e+02 Score=28.55 Aligned_cols=80 Identities=16% Similarity=0.083 Sum_probs=49.8
Q ss_pred cCCCCeEEEcCCCchh-------hH---HHHHHCCCeEEEecCC-C--CC--CCC---HHHHHHHhhcCCceEEEEcCCC
Q 014492 167 LDPGDKIVDCPPTFTM-------YE---FDAAVNGAAVVKVPRK-S--DF--SLN---VELIADAVEREKPKCIFLTSPN 228 (423)
Q Consensus 167 ~~~gd~Vl~~~p~y~~-------~~---~~~~~~g~~~~~v~~~-~--~~--~~d---~~~l~~~i~~~~~~~i~l~~p~ 228 (423)
+++||+|-+.+|+.+. +. ...+..|.+|+.-+.- . ++ +-| .++|.+++.++.+++|+...--
T Consensus 40 Lk~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~af~Dp~i~aI~~~rGG 119 (371)
T 3tla_A 40 LAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTIGG 119 (371)
T ss_dssp CCTTCEEEEECSSCCHHHHTHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHTCTTEEEEEESCCC
T ss_pred CCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEcccc
Confidence 5789999999998642 22 2344589999988721 1 11 112 4566677776889999977555
Q ss_pred CCcCcCCCHHHHHHHHcC
Q 014492 229 NPDGSIINDEDLLKILEM 246 (423)
Q Consensus 229 NPtG~~~~~~~l~~i~~~ 246 (423)
.-+-.+++.=+...|.+.
T Consensus 120 yga~rlLp~LD~~~i~~~ 137 (371)
T 3tla_A 120 DNSNSLLPFLDYDAIIAN 137 (371)
T ss_dssp SCGGGGGGGSCHHHHHHS
T ss_pred ccHHHHHhhcChhhHHhC
Confidence 445566554444555443
No 269
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=40.92 E-value=1.8e+02 Score=25.77 Aligned_cols=101 Identities=17% Similarity=0.166 Sum_probs=55.0
Q ss_pred CCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHH---CC-CeEEEecCCCCCCCCHHHHHHHhhc--
Q 014492 143 GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV---NG-AAVVKVPRKSDFSLNVELIADAVER-- 216 (423)
Q Consensus 143 g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~---~g-~~~~~v~~~~~~~~d~~~l~~~i~~-- 216 (423)
.++...+++|.|+...=..+.+.|.+.|..|++..-.-.......+. .| .++..+..|- -|.+.+++.+++
T Consensus 38 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv---~d~~~v~~~~~~~~ 114 (293)
T 3rih_A 38 DLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDV---SDPGSCADAARTVV 114 (293)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCT---TCHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeC---CCHHHHHHHHHHHH
Confidence 34444566665554333455566788898887765444433333322 23 4666666542 355665555432
Q ss_pred ---CCceEEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 217 ---EKPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 217 ---~~~~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
.++..++-+.-..+.+. -.+.+++.+..+.
T Consensus 115 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~v 149 (293)
T 3rih_A 115 DAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDV 149 (293)
T ss_dssp HHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 36777775533233332 3477788777764
No 270
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=40.86 E-value=1.4e+02 Score=27.39 Aligned_cols=80 Identities=21% Similarity=0.177 Sum_probs=49.9
Q ss_pred cCCCCeEEEcCCCchhh-------H---HHHHHCCCeEEEecC--C-CCC--CCC---HHHHHHHhhcCCceEEEEcCCC
Q 014492 167 LDPGDKIVDCPPTFTMY-------E---FDAAVNGAAVVKVPR--K-SDF--SLN---VELIADAVEREKPKCIFLTSPN 228 (423)
Q Consensus 167 ~~~gd~Vl~~~p~y~~~-------~---~~~~~~g~~~~~v~~--~-~~~--~~d---~~~l~~~i~~~~~~~i~l~~p~ 228 (423)
+++||+|-+.+|+.+.- . ...+..|.+++.-+. . .++ +-| .++|.+++.++.+++|+...--
T Consensus 9 L~~GD~I~ivaPS~~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rGG 88 (331)
T 4e5s_A 9 LKKGDEIRVISPSCSLSIVSTENRRLAVKRLTELGFHVTFSTHAEEIDRFASSSISSRVQDLHEAFRDPNVKAILTTLGG 88 (331)
T ss_dssp CCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCCC
T ss_pred CCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEcccc
Confidence 67899999988887522 1 223458999998772 1 111 112 4566677776889999977555
Q ss_pred CCcCcCCCHHHHHHHHcC
Q 014492 229 NPDGSIINDEDLLKILEM 246 (423)
Q Consensus 229 NPtG~~~~~~~l~~i~~~ 246 (423)
.-+-.+++.=+...|.+.
T Consensus 89 ~g~~rlL~~lD~~~i~~~ 106 (331)
T 4e5s_A 89 YNSNGLLKYLDYDLIREN 106 (331)
T ss_dssp SCGGGGGGGCCHHHHHTS
T ss_pred ccHHHHHhhcChhHHHhC
Confidence 445556554444555443
No 271
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=40.78 E-value=1e+02 Score=26.96 Aligned_cols=142 Identities=13% Similarity=0.088 Sum_probs=70.8
Q ss_pred CCCCcEEEeCCHHHHHHH-HHHHhcCCCCeEEEcCCCch--hhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc----
Q 014492 144 LESDHILVGCGADELIDL-IMRCVLDPGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---- 216 (423)
Q Consensus 144 ~~~~~i~~t~G~~~al~~-~~~~l~~~gd~Vl~~~p~y~--~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---- 216 (423)
++-.-+++|. ++.+|.. +...|.+.|-.|++..-.-. .........|.+...++.|-. |.+++++.+++
T Consensus 5 L~gKvalVTG-as~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~---~~~~v~~~v~~~~~~ 80 (258)
T 4gkb_A 5 LQDKVVIVTG-GASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQ---DDAQCRDAVAQTIAT 80 (258)
T ss_dssp CTTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTT---CHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeC-CCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecC---CHHHHHHHHHHHHHH
Confidence 3333445554 4456644 44567788877665433222 222223345667777765432 45555544432
Q ss_pred -CCceEEEEc-CCCCCcCcCCCHHHHHHHHcCCCEEEEccCCccccCCCchhhhh-ccCCcEEEEccChhhhcccCcccc
Q 014492 217 -EKPKCIFLT-SPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWV-KKHDNLIVLRTFSKRAGLAGLRVG 293 (423)
Q Consensus 217 -~~~~~i~l~-~p~NPtG~~~~~~~l~~i~~~~~~li~Deay~~~~~~~~~~~~~-~~~~~~i~i~S~SK~~g~~G~R~G 293 (423)
.+...++-+ ..+.+...-.+.+++.+..+.|+. ..|.......+.. ...+++|.+.|.+=..+.+|. ..
T Consensus 81 ~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~-------g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~-~~ 152 (258)
T 4gkb_A 81 FGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLI-------HYYAMAHYCVPHLKATRGAIVNISSKTAVTGQGNT-SG 152 (258)
T ss_dssp HSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTH-------HHHHHHHHHHHHHHHHTCEEEEECCTHHHHCCSSC-HH
T ss_pred hCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhH-------HHHHHHHHHHHHHHhcCCeEEEEeehhhccCCCCc-hH
Confidence 467777644 223333445677888887765321 1111001111111 235778888888654554442 33
Q ss_pred cccc
Q 014492 294 YGAF 297 (423)
Q Consensus 294 ~i~~ 297 (423)
|..+
T Consensus 153 Y~as 156 (258)
T 4gkb_A 153 YCAS 156 (258)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 272
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=40.62 E-value=1.8e+02 Score=25.30 Aligned_cols=103 Identities=7% Similarity=0.045 Sum_probs=57.3
Q ss_pred HhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHH---HHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-
Q 014492 141 DSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF---DAAVNGAAVVKVPRKSDFSLNVELIADAVER- 216 (423)
Q Consensus 141 ~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~- 216 (423)
.+.++...+++|.|+...=..+.+.|.+.|..|++..-.-..... ..+..|.++..+..|- -|.+.+++.+++
T Consensus 27 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl---~d~~~v~~~~~~~ 103 (276)
T 3r1i_A 27 LFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDV---TQPDQVRGMLDQM 103 (276)
T ss_dssp GGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCT---TCHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCC---CCHHHHHHHHHHH
Confidence 345555567777666544445556678889887765544333222 2233566666666542 355666655542
Q ss_pred ----CCceEEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 217 ----EKPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 217 ----~~~~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
.++..++-+.-....+. -.+.++++++.+.
T Consensus 104 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 139 (276)
T 3r1i_A 104 TGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDT 139 (276)
T ss_dssp HHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 36777775532222222 3467777777664
No 273
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=40.55 E-value=1.7e+02 Score=25.60 Aligned_cols=105 Identities=10% Similarity=0.070 Sum_probs=55.7
Q ss_pred hCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhh---HHHHHHCCCeEEEecCCCCCCCCHHHHHHHhh-cC
Q 014492 142 SGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMY---EFDAAVNGAAVVKVPRKSDFSLNVELIADAVE-RE 217 (423)
Q Consensus 142 ~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~---~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~ 217 (423)
+.++...+++|.|+...=..+...|.+.|..|++..-.-... ....+..|.++..+..|-...-+.+++.+.+. ..
T Consensus 29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g 108 (275)
T 4imr_A 29 FGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIA 108 (275)
T ss_dssp HCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhC
Confidence 445555666666655444455666788898877654333222 22233357777777754332223444444332 24
Q ss_pred CceEEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 218 KPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 218 ~~~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
++..++-+.-....+. -.+.+++.+..+.
T Consensus 109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~v 139 (275)
T 4imr_A 109 PVDILVINASAQINATLSALTPNDLAFQLAV 139 (275)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 6777775532222222 3467777777664
No 274
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=40.21 E-value=1e+02 Score=26.94 Aligned_cols=97 Identities=9% Similarity=0.079 Sum_probs=53.7
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHH----HHCCCeEEEecCCCCCCCCHHHHHHHhhc-----C
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPRKSDFSLNVELIADAVER-----E 217 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~ 217 (423)
..+++|.|+...=..+.+.|.+.|..|++..-.-....... ...|.++..+..|- -|.+.+++.+++ .
T Consensus 28 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv---~~~~~v~~~~~~~~~~~g 104 (277)
T 4fc7_A 28 KVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDV---RAPPAVMAAVDQALKEFG 104 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCT---TCHHHHHHHHHHHHHHHS
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCC---CCHHHHHHHHHHHHHHcC
Confidence 45666666554334556668888988876554433222222 22467777777543 355665555532 3
Q ss_pred CceEEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 218 KPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 218 ~~~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
++..++-+.-....+. -.+.+++.+..+.
T Consensus 105 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 135 (277)
T 4fc7_A 105 RIDILINCAAGNFLCPAGALSFNAFKTVMDI 135 (277)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCEEEECCcCCCCCCcccCCHHHHHHHHHH
Confidence 6777775532222222 3567777777664
No 275
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=40.17 E-value=1.6e+02 Score=25.45 Aligned_cols=100 Identities=16% Similarity=0.113 Sum_probs=53.1
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHH----HHCCCeEEEecCCCCCCCCHHHHHHHhhc---
Q 014492 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPRKSDFSLNVELIADAVER--- 216 (423)
Q Consensus 144 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~d~~~l~~~i~~--- 216 (423)
++...+++|.|+...=..+...|.+.|..|++..-.-....... +..|.++..+..|- -|.+.+++.+++
T Consensus 19 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl---~~~~~v~~~~~~~~~ 95 (267)
T 1vl8_A 19 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDV---SNYEEVKKLLEAVKE 95 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT---TCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCC---CCHHHHHHHHHHHHH
Confidence 33345666655544334555667788988776544332222222 22366777666542 356666655532
Q ss_pred --CCceEEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 217 --EKPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 217 --~~~~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
.++.+++-+......+. -.+.+++.++.+.
T Consensus 96 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 129 (267)
T 1vl8_A 96 KFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEV 129 (267)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHH
Confidence 36777775532222221 2466777766654
No 276
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=40.11 E-value=1.2e+02 Score=26.56 Aligned_cols=95 Identities=13% Similarity=0.064 Sum_probs=52.5
Q ss_pred cEEEeCCHHHHHH-HHHHHhcCCCCeEEEcCCCchhhHHH---HHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CC
Q 014492 148 HILVGCGADELID-LIMRCVLDPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (423)
Q Consensus 148 ~i~~t~G~~~al~-~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~ 218 (423)
.+++|.|+ .+|. .+...|.+.|..|++..-.-...... .+..|.++..+..|- -|.+.+++.+++ .+
T Consensus 6 ~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv---~d~~~v~~~~~~~~~~~g~ 81 (264)
T 3tfo_A 6 VILITGAS-GGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDV---TDRHSVAAFAQAAVDTWGR 81 (264)
T ss_dssp EEEESSTT-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCT---TCHHHHHHHHHHHHHHHSC
T ss_pred EEEEeCCc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCC---CCHHHHHHHHHHHHHHcCC
Confidence 45555544 4554 44556778898887765443322222 233577877777543 355666555432 36
Q ss_pred ceEEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 219 PKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 219 ~~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
+..++-+--..+.+. -.+.+++.+..+.
T Consensus 82 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~v 111 (264)
T 3tfo_A 82 IDVLVNNAGVMPLSPLAAVKVDEWERMIDV 111 (264)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 777775533333332 3467777777664
No 277
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=39.98 E-value=1.3e+02 Score=26.15 Aligned_cols=102 Identities=12% Similarity=0.026 Sum_probs=57.6
Q ss_pred hCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHH---HHHCCCeEEEecCCCCCCCCHHHHHHHhhc--
Q 014492 142 SGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVER-- 216 (423)
Q Consensus 142 ~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-- 216 (423)
+.++...+++|.|+...=..+.+.|.+.|..|++..-.-...... .+..|.++..+..|- -|.+.+++.+++
T Consensus 22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv---~d~~~v~~~~~~~~ 98 (271)
T 4ibo_A 22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDV---TSESEIIEAFARLD 98 (271)
T ss_dssp GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCT---TCHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCC---CCHHHHHHHHHHHH
Confidence 345445666666555443455666788898888766544333322 233577777777542 356666655532
Q ss_pred ---CCceEEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 217 ---EKPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 217 ---~~~~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
.++..++-+.-..+.+. -.+.+++.+..+.
T Consensus 99 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~v 133 (271)
T 4ibo_A 99 EQGIDVDILVNNAGIQFRKPMIELETADWQRVIDT 133 (271)
T ss_dssp HHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHH
Confidence 36777775532222222 3467777777664
No 278
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=39.54 E-value=98 Score=27.01 Aligned_cols=97 Identities=11% Similarity=0.021 Sum_probs=53.7
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CCceE
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKC 221 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~ 221 (423)
..+++|.|+...=..+.+.|.+.|..|++..-.-.......+..|.++..+..|- -|.+.+++.+++ .++..
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv---~~~~~v~~~~~~~~~~~g~id~ 88 (271)
T 3tzq_B 12 KVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDL---TNEVSVRALIDFTIDTFGRLDI 88 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCT---TCHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCC---CCHHHHHHHHHHHHHHcCCCCE
Confidence 4566666554433455666788898887665444444444444466666665432 355666555532 36777
Q ss_pred EEEcCCCC-C-cC--cCCCHHHHHHHHcC
Q 014492 222 IFLTSPNN-P-DG--SIINDEDLLKILEM 246 (423)
Q Consensus 222 i~l~~p~N-P-tG--~~~~~~~l~~i~~~ 246 (423)
++-+.-.. + .+ .-.+.+++.+..+.
T Consensus 89 lv~nAg~~~~~~~~~~~~~~~~~~~~~~v 117 (271)
T 3tzq_B 89 VDNNAAHSDPADMLVTQMTVDVWDDTFTV 117 (271)
T ss_dssp EEECCCCCCTTCCCGGGCCHHHHHHHHHH
T ss_pred EEECCCCCCCCCCccccCCHHHHHHHHHH
Confidence 77552222 2 11 13467777776654
No 279
>1ywx_A 30S ribosomal protein S24E; GFT MRR16, nesgc, structural genomics, PSI, protein structure initiative; NMR {Methanococcus maripaludis} SCOP: d.12.1.3
Probab=38.35 E-value=31 Score=25.71 Aligned_cols=26 Identities=12% Similarity=0.233 Sum_probs=22.2
Q ss_pred CCcchHHHHHHHHHHhCCCCCcEEEe
Q 014492 127 PDPESRRLRAALAKDSGLESDHILVG 152 (423)
Q Consensus 127 ~~~g~~~lr~~ia~~~g~~~~~i~~t 152 (423)
+.+.-.++|+.||+.++++++.|++-
T Consensus 28 ~tpsk~eirekLAk~~~~~~d~Vvv~ 53 (102)
T 1ywx_A 28 ATPSIKDVKMKLVAVLNANKQVLVVD 53 (102)
T ss_dssp CCCCHHHHHHHHHHHHTSCSTTEEEE
T ss_pred CCCCHHHHHHHHHHHHCCCCCEEEEE
Confidence 55667899999999999999988764
No 280
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=38.33 E-value=1.6e+02 Score=25.69 Aligned_cols=97 Identities=9% Similarity=0.054 Sum_probs=53.3
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCC-------------CchhhH---HHHHHCCCeEEEecCCCCCCCCHHHH
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPP-------------TFTMYE---FDAAVNGAAVVKVPRKSDFSLNVELI 210 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p-------------~y~~~~---~~~~~~g~~~~~v~~~~~~~~d~~~l 210 (423)
..+++|.|+...=..+...|.+.|..|++..- .-.... ...+..+.++..+..|- -|.+.+
T Consensus 12 k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~v 88 (277)
T 3tsc_A 12 RVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDT---RDFDRL 88 (277)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCT---TCHHHH
T ss_pred CEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCC---CCHHHH
Confidence 45666665554334555667888988776432 111111 22234577777777543 356666
Q ss_pred HHHhhc-----CCceEEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 211 ADAVER-----EKPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 211 ~~~i~~-----~~~~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
++.+++ .++..++-+.-..+.+. -.+.+++++..+.
T Consensus 89 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~v 131 (277)
T 3tsc_A 89 RKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDI 131 (277)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 665542 46777775532222232 3467777777664
No 281
>1xn9_A 30S ribosomal protein S24E; beta+alpha, GFT structural genomics, protein structure initiative, PSI, NESG, MAR11; NMR {Methanosarcina mazei} SCOP: d.12.1.3
Probab=37.99 E-value=32 Score=25.55 Aligned_cols=26 Identities=15% Similarity=0.243 Sum_probs=22.2
Q ss_pred CCcchHHHHHHHHHHhCCCCCcEEEe
Q 014492 127 PDPESRRLRAALAKDSGLESDHILVG 152 (423)
Q Consensus 127 ~~~g~~~lr~~ia~~~g~~~~~i~~t 152 (423)
+.+.-.++|+.||+.++++++.|++-
T Consensus 28 ~tpsk~eirekLAk~~~~~~~~Vvv~ 53 (101)
T 1xn9_A 28 STPSRNDVRNKLAAMLNAPLELLVIQ 53 (101)
T ss_dssp SCCCHHHHHHHHHHHTTCCTTTEEEE
T ss_pred CCCCHHHHHHHHHHHHCCCCCEEEEE
Confidence 55667899999999999999988764
No 282
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=37.65 E-value=1.5e+02 Score=25.85 Aligned_cols=97 Identities=12% Similarity=0.096 Sum_probs=53.5
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHH---HHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CC
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~ 218 (423)
..+++|.|+...=..+...|.+.|..|++..-.-...... .+..|.++..+..|- -|.+.+++.+++ .+
T Consensus 25 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv---~d~~~v~~~~~~~~~~~g~ 101 (279)
T 3sju_A 25 QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDV---TSTDEVHAAVAAAVERFGP 101 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCT---TCHHHHHHHHHHHHHHHCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCC---CCHHHHHHHHHHHHHHcCC
Confidence 3566665554333445566788898887655443322222 233467777776542 356666555532 36
Q ss_pred ceEEEEcCCCCCcC--cCCCHHHHHHHHcC
Q 014492 219 PKCIFLTSPNNPDG--SIINDEDLLKILEM 246 (423)
Q Consensus 219 ~~~i~l~~p~NPtG--~~~~~~~l~~i~~~ 246 (423)
+..++-+.-..+.+ .-.+.+++++..+.
T Consensus 102 id~lv~nAg~~~~~~~~~~~~~~~~~~~~v 131 (279)
T 3sju_A 102 IGILVNSAGRNGGGETADLDDALWADVLDT 131 (279)
T ss_dssp CCEEEECCCCCCCSCGGGCCHHHHHHHHHH
T ss_pred CcEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 77777553222223 23567777777664
No 283
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=37.42 E-value=1e+02 Score=26.93 Aligned_cols=137 Identities=11% Similarity=0.040 Sum_probs=71.1
Q ss_pred hCCCCCcEEEeCCHHHHHHH-HHHHhcCCCCeEEEcCCCc-hhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCc
Q 014492 142 SGLESDHILVGCGADELIDL-IMRCVLDPGDKIVDCPPTF-TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKP 219 (423)
Q Consensus 142 ~g~~~~~i~~t~G~~~al~~-~~~~l~~~gd~Vl~~~p~y-~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~ 219 (423)
|.++-..+++| |++.+|-. +...|.+.|-.|++..-.- .......+..|.++..+..|-. |.+++++.++..+.
T Consensus 5 f~L~GKvalVT-Gas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~---d~~~v~~~~~~g~i 80 (247)
T 4hp8_A 5 FSLEGRKALVT-GANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFA---DPLAAKDSFTDAGF 80 (247)
T ss_dssp TCCTTCEEEET-TTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTT---STTTTTTSSTTTCC
T ss_pred cCCCCCEEEEe-CcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCC---CHHHHHHHHHhCCC
Confidence 34443445555 44456644 4556788898777654322 2333445567888888875432 33444555554567
Q ss_pred eEEEEcCCCCCcC--cCCCHHHHHHHHcCCCEEEEccCCccccCCCchhhhh---ccCCcEEEEccChhhhcccC
Q 014492 220 KCIFLTSPNNPDG--SIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWV---KKHDNLIVLRTFSKRAGLAG 289 (423)
Q Consensus 220 ~~i~l~~p~NPtG--~~~~~~~l~~i~~~~~~li~Deay~~~~~~~~~~~~~---~~~~~~i~i~S~SK~~g~~G 289 (423)
..++-+---++.+ .-++.+++.++.+.|+ .+.|.......+.. ...+++|.+.|.+=..+.+|
T Consensus 81 DiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl-------~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~ 148 (247)
T 4hp8_A 81 DILVNNAGIIRRADSVEFSELDWDEVMDVNL-------KALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIR 148 (247)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHT-------HHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSS
T ss_pred CEEEECCCCCCCCCcccccHHHHHHHHHHHh-------HHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCC
Confidence 7666432222223 2357888888877532 01010001111111 23567888888765445444
No 284
>4f6o_A Metacaspase-1; rossmann fold, hydrolase; HET: DFH; 1.68A {Saccharomyces cerevisiae}
Probab=37.32 E-value=38 Score=31.42 Aligned_cols=47 Identities=17% Similarity=0.253 Sum_probs=32.0
Q ss_pred chHHHHHHHHHHhCCCCCcEE-EeCC--------HHHHHHHHHHHhc---CCCCeEEEc
Q 014492 130 ESRRLRAALAKDSGLESDHIL-VGCG--------ADELIDLIMRCVL---DPGDKIVDC 176 (423)
Q Consensus 130 g~~~lr~~ia~~~g~~~~~i~-~t~G--------~~~al~~~~~~l~---~~gd~Vl~~ 176 (423)
....+++.|.+.+|+++++|. ++.. +.+.|...+..|. ++||.+++-
T Consensus 76 DA~~m~~~L~~~~Gf~~~~I~lLtd~~~~~~~~pTr~nI~~aL~~L~~~a~pgD~llfY 134 (350)
T 4f6o_A 76 DAHNIFNFLTNGYGYSSDDIVILTDDQNDLVRVPTRANMIRAMQWLVKDAQPNDSLFLH 134 (350)
T ss_dssp HHHHHHHHHHHHSCCCGGGEEEEETTSSCGGGSCCHHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred HHHHHHHHHHHhcCCCccceeeecccccccccCCCHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 345788888888898877765 4542 4566666667664 478988764
No 285
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=37.20 E-value=2.1e+02 Score=25.18 Aligned_cols=130 Identities=15% Similarity=0.154 Sum_probs=67.7
Q ss_pred CCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCch----hhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----
Q 014492 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT----MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER----- 216 (423)
Q Consensus 146 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~----~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~----- 216 (423)
...+++|.|+...=..+.+.|.+.|..|++..-.-. ......+..|.++..+..|- -|.+.+++.+++
T Consensus 47 gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv---~d~~~v~~~~~~~~~~~ 123 (291)
T 3ijr_A 47 GKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDL---SDEQHCKDIVQETVRQL 123 (291)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCT---TSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCC---CCHHHHHHHHHHHHHHc
Confidence 345666666554444556667888988776543322 12223344677887777543 355665555432
Q ss_pred CCceEEEEcC-CCCCcCc--CCCHHHHHHHHcC---CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhccc
Q 014492 217 EKPKCIFLTS-PNNPDGS--IINDEDLLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLA 288 (423)
Q Consensus 217 ~~~~~i~l~~-p~NPtG~--~~~~~~l~~i~~~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~ 288 (423)
.++..++-+. ...+.+. -.+.+++.++.+. +.+.+...+.. .....+++|.+.|.+-..+.+
T Consensus 124 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~----------~~~~~g~iv~isS~~~~~~~~ 191 (291)
T 3ijr_A 124 GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALS----------HLKQGDVIINTASIVAYEGNE 191 (291)
T ss_dssp SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHT----------TCCTTCEEEEECCTHHHHCCT
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH----------HHhhCCEEEEEechHhcCCCC
Confidence 3677777542 2222222 2367778777764 22222222111 111235677888875544433
No 286
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=37.11 E-value=1.3e+02 Score=26.86 Aligned_cols=90 Identities=9% Similarity=0.008 Sum_probs=51.7
Q ss_pred EEEeCCHHHHHHHHHHHhcCC---CCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCC-HHHHHHHhhcCCceEEEE
Q 014492 149 ILVGCGADELIDLIMRCVLDP---GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLN-VELIADAVEREKPKCIFL 224 (423)
Q Consensus 149 i~~t~G~~~al~~~~~~l~~~---gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d-~~~l~~~i~~~~~~~i~l 224 (423)
+++.+|.-..+..++...... .+.+++.+ .++.....++.+|+.+..+|........ -+++.+.+++.++.++++
T Consensus 94 ~vl~Sg~g~~l~~ll~~~~~g~l~~~i~~Vis-n~~~~~~~A~~~gIp~~~~~~~~~~r~~~~~~~~~~l~~~~~Dlivl 172 (286)
T 3n0v_A 94 VIMVSKADHCLNDLLYRQRIGQLGMDVVAVVS-NHPDLEPLAHWHKIPYYHFALDPKDKPGQERKVLQVIEETGAELVIL 172 (286)
T ss_dssp EEEESSCCHHHHHHHHHHHTTSSCCEEEEEEE-SSSTTHHHHHHTTCCEEECCCBTTBHHHHHHHHHHHHHHHTCSEEEE
T ss_pred EEEEeCCCCCHHHHHHHHHCCCCCcEEEEEEe-CcHHHHHHHHHcCCCEEEeCCCcCCHHHHHHHHHHHHHhcCCCEEEe
Confidence 345666666777777655332 23222221 1222334588899999988742211111 134556666678999998
Q ss_pred cCCCCCcCcCCCHHHHHHH
Q 014492 225 TSPNNPDGSIINDEDLLKI 243 (423)
Q Consensus 225 ~~p~NPtG~~~~~~~l~~i 243 (423)
.. .+.+++.+-+...
T Consensus 173 a~----y~~il~~~~l~~~ 187 (286)
T 3n0v_A 173 AR----YMQVLSPELCRRL 187 (286)
T ss_dssp SS----CCSCCCHHHHHHT
T ss_pred cc----cccccCHHHHhhh
Confidence 64 4678887766554
No 287
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=37.09 E-value=2.1e+02 Score=24.98 Aligned_cols=99 Identities=10% Similarity=0.059 Sum_probs=55.2
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCch----------hhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHh
Q 014492 145 ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT----------MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAV 214 (423)
Q Consensus 145 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~----------~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i 214 (423)
+...+++|.|+...=..+.+.|.+.|..|++..-.-. ......+..|.++..+..|- -|.+.+++.+
T Consensus 8 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv---~~~~~v~~~~ 84 (285)
T 3sc4_A 8 RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDI---RDGDAVAAAV 84 (285)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCT---TSHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCC---CCHHHHHHHH
Confidence 3345666666554444556668888988776433221 11222334577888887543 3556665554
Q ss_pred hc-----CCceEEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 215 ER-----EKPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 215 ~~-----~~~~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
++ .++..++-+.-....+. -.+.+++.+..+.
T Consensus 85 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~v 123 (285)
T 3sc4_A 85 AKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGI 123 (285)
T ss_dssp HHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHH
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 32 36777776533333332 3567777776664
No 288
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=37.08 E-value=1.3e+02 Score=25.58 Aligned_cols=97 Identities=9% Similarity=0.065 Sum_probs=53.3
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhH---HHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CC
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE---FDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~ 218 (423)
..+++|.|+...=..+.+.|.+.|..|++....-.... ...+..|.++..+..|- -|.+.+++.+++ .+
T Consensus 6 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~~~ 82 (247)
T 3lyl_A 6 KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNI---SDIESIQNFFAEIKAENLA 82 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCT---TCHHHHHHHHHHHHHTTCC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecC---CCHHHHHHHHHHHHHHcCC
Confidence 45666665544334555667788988876654443222 22334577777776543 355666555432 35
Q ss_pred ceEEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 219 PKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 219 ~~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
+..++-+.-..+.+. -.+.+++.+..+.
T Consensus 83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 112 (247)
T 3lyl_A 83 IDILVNNAGITRDNLMMRMSEDEWQSVINT 112 (247)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCchhhCCHHHHHHHHHH
Confidence 777775532222222 3467777776654
No 289
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=36.67 E-value=1.5e+02 Score=25.61 Aligned_cols=98 Identities=9% Similarity=0.048 Sum_probs=54.4
Q ss_pred CCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHH---HHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----C
Q 014492 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF---DAAVNGAAVVKVPRKSDFSLNVELIADAVER-----E 217 (423)
Q Consensus 146 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~ 217 (423)
...+++|.|+...=..+...|.+.|..|++..-.-..... .....|.++..+..|- -|.+.+++.+.+ .
T Consensus 29 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~v~~~~~~~~~~~g 105 (262)
T 3rkr_A 29 GQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDL---SHSDAIAAFATGVLAAHG 105 (262)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCT---TCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecC---CCHHHHHHHHHHHHHhcC
Confidence 3456665555433344555677889888776544433222 2233577777777543 355666555432 3
Q ss_pred CceEEEEcCCC-CCcCc--CCCHHHHHHHHcC
Q 014492 218 KPKCIFLTSPN-NPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 218 ~~~~i~l~~p~-NPtG~--~~~~~~l~~i~~~ 246 (423)
++..++-+... .+.|. ..+.+++.+..+.
T Consensus 106 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~v 137 (262)
T 3rkr_A 106 RCDVLVNNAGVGWFGGPLHTMKPAEWDALIAV 137 (262)
T ss_dssp CCSEEEECCCCCCCSSCGGGSCHHHHHHHHHH
T ss_pred CCCEEEECCCccCCCCCcccCCHHHHHHHHHH
Confidence 67777765322 33332 3567777776664
No 290
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=36.47 E-value=1.5e+02 Score=25.32 Aligned_cols=97 Identities=15% Similarity=0.031 Sum_probs=51.6
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CCceE
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKC 221 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~ 221 (423)
..+++|.|+...=..+...|.+.|..|++..-.-.......+..|.++..+..|- -|.+.+++.++. .++..
T Consensus 7 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~---~~~~~v~~~~~~~~~~~g~id~ 83 (253)
T 1hxh_A 7 KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDV---SSEADWTLVMAAVQRRLGTLNV 83 (253)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCT---TCHHHHHHHHHHHHHHHCSCCE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccC---CCHHHHHHHHHHHHHHcCCCCE
Confidence 3455555444333445556778888887765443333333333366666666442 356666655532 35677
Q ss_pred EEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 222 IFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 222 i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
++-+....+.+. -.+.+++.+..+.
T Consensus 84 lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 110 (253)
T 1hxh_A 84 LVNNAGILLPGDMETGRLEDFSRLLKI 110 (253)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHh
Confidence 775532222222 2466777766654
No 291
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=36.03 E-value=2e+02 Score=24.33 Aligned_cols=98 Identities=12% Similarity=0.084 Sum_probs=51.0
Q ss_pred CCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeE-EEecCCCCCCCCHHHHHHHhhc----CCce
Q 014492 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAV-VKVPRKSDFSLNVELIADAVER----EKPK 220 (423)
Q Consensus 146 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~-~~v~~~~~~~~d~~~l~~~i~~----~~~~ 220 (423)
...+++|.|+...=..+...|.+.|..|++..-.-.......+..+.++ ..+..| --|.+.+++.+++ .++.
T Consensus 11 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D---~~~~~~~~~~~~~~~~~~~id 87 (254)
T 2wsb_A 11 GACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVAD---VTDAEAMTAAAAEAEAVAPVS 87 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECC---TTCHHHHHHHHHHHHHHSCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEe---cCCHHHHHHHHHHHHhhCCCc
Confidence 3456666555433345566677888887765443332333333334444 445433 2356666665532 4677
Q ss_pred EEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 221 CIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 221 ~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
.++-+....+.+. -.+.+++.+..+.
T Consensus 88 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 115 (254)
T 2wsb_A 88 ILVNSAGIARLHDALETDDATWRQVMAV 115 (254)
T ss_dssp EEEECCCCCCCBCSTTCCHHHHHHHHHH
T ss_pred EEEECCccCCCCCcccCCHHHHHHHHHH
Confidence 7775532222222 2356666665553
No 292
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=36.02 E-value=1.7e+02 Score=25.09 Aligned_cols=97 Identities=14% Similarity=-0.006 Sum_probs=50.8
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CCceE
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKC 221 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~ 221 (423)
..+++|.|+...=..+...|.+.|..|++..-.-.......+..|.++..+..|- -|.+.+++.+++ .++..
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~g~iD~ 82 (254)
T 1hdc_A 6 KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDV---TIEEDWQRVVAYAREEFGSVDG 82 (254)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCT---TCHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecC---CCHHHHHHHHHHHHHHcCCCCE
Confidence 3566665554333455566778898877654333333333333455566665432 255666655532 36777
Q ss_pred EEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 222 IFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 222 i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
++-+....+.+. -.+.+++.+..+.
T Consensus 83 lv~nAg~~~~~~~~~~~~~~~~~~~~~ 109 (254)
T 1hdc_A 83 LVNNAGISTGMFLETESVERFRKVVEI 109 (254)
T ss_dssp EEECCCCCCCSCGGGSCHHHHHHHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 775532222221 2466667666654
No 293
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=35.78 E-value=1.9e+02 Score=25.63 Aligned_cols=99 Identities=12% Similarity=0.092 Sum_probs=55.1
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHH---HHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----
Q 014492 145 ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVER----- 216 (423)
Q Consensus 145 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~----- 216 (423)
+...+++|.|+...=..+...|.+.|..|++..-.-...... .+..|.++..+..|- -|.+.+++.+++
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv---~d~~~v~~~~~~~~~~~ 106 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDV---RHLDEMVRLADEAFRLL 106 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT---TCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccC---CCHHHHHHHHHHHHHhC
Confidence 334566666554433445566788898887765444333322 233467777776543 355666655532
Q ss_pred CCceEEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 217 EKPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 217 ~~~~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
.++..++-+.-....|. -.+.+++.+..+.
T Consensus 107 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~v 138 (301)
T 3tjr_A 107 GGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDI 138 (301)
T ss_dssp SSCSEEEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHh
Confidence 36777775532222232 3567777776664
No 294
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=35.27 E-value=1.4e+02 Score=26.85 Aligned_cols=90 Identities=11% Similarity=0.063 Sum_probs=51.6
Q ss_pred EEEeCCHHHHHHHHHHHhcC---CCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCC-HHHHHHHhhcCCceEEEE
Q 014492 149 ILVGCGADELIDLIMRCVLD---PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLN-VELIADAVEREKPKCIFL 224 (423)
Q Consensus 149 i~~t~G~~~al~~~~~~l~~---~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d-~~~l~~~i~~~~~~~i~l 224 (423)
+++.+|.-..+..++..... +.+.+++.+ .++.....|+.+|+.+..+|........ -+++.+.+++.++.++++
T Consensus 99 ~vl~Sg~g~~l~~ll~~~~~g~l~~~i~~Vis-n~~~~~~~A~~~gIp~~~~~~~~~~r~~~~~~~~~~l~~~~~Dlivl 177 (292)
T 3lou_A 99 LIMVSKLEHCLADLLFRWKMGELKMDIVGIVS-NHPDFAPLAAQHGLPFRHFPITADTKAQQEAQWLDVFETSGAELVIL 177 (292)
T ss_dssp EEEECSCCHHHHHHHHHHHHTSSCCEEEEEEE-SSSTTHHHHHHTTCCEEECCCCSSCHHHHHHHHHHHHHHHTCSEEEE
T ss_pred EEEEcCCCcCHHHHHHHHHcCCCCcEEEEEEe-CcHHHHHHHHHcCCCEEEeCCCcCCHHHHHHHHHHHHHHhCCCEEEe
Confidence 34566666677777765432 223322222 1222334588899999988843211111 134556666678999998
Q ss_pred cCCCCCcCcCCCHHHHHHH
Q 014492 225 TSPNNPDGSIINDEDLLKI 243 (423)
Q Consensus 225 ~~p~NPtG~~~~~~~l~~i 243 (423)
.. .+.+++.+-+...
T Consensus 178 a~----y~~il~~~~l~~~ 192 (292)
T 3lou_A 178 AR----YMQVLSPEASARL 192 (292)
T ss_dssp SS----CCSCCCHHHHHHT
T ss_pred cC----chhhCCHHHHhhh
Confidence 54 4678887766554
No 295
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=35.07 E-value=2.1e+02 Score=24.32 Aligned_cols=97 Identities=10% Similarity=0.063 Sum_probs=52.4
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHH---HHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CC
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~ 218 (423)
..+++|.|+...=..+...|.+.|..|++..-.-....... +..|.++..+..|- -|.+.+++.+++ .+
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv---~~~~~~~~~~~~~~~~~g~ 84 (247)
T 2jah_A 8 KVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDV---ADRQGVDAAVASTVEALGG 84 (247)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT---TCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCC---CCHHHHHHHHHHHHHHcCC
Confidence 45666665544334555667788887776543322222222 22466776666542 356666655532 36
Q ss_pred ceEEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 219 PKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 219 ~~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
+..++-+.-..+.+. -.+.+++.++.+.
T Consensus 85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 114 (247)
T 2jah_A 85 LDILVNNAGIMLLGPVEDADTTDWTRMIDT 114 (247)
T ss_dssp CSEEEECCCCCCCCCSTTCCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCchhhCCHHHHHHHHHH
Confidence 777775532222332 2466777776664
No 296
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=34.94 E-value=2.1e+02 Score=24.20 Aligned_cols=99 Identities=8% Similarity=0.046 Sum_probs=51.6
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHH---HHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----
Q 014492 145 ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF---DAAVNGAAVVKVPRKSDFSLNVELIADAVER----- 216 (423)
Q Consensus 145 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~----- 216 (423)
+...+++|.|+...=..+...|.+.|..|++..-.-..... ..+..+.++..+..|- -|.+.+++.+++
T Consensus 10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~ 86 (255)
T 1fmc_A 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDI---TSEQELSALADFAISKL 86 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT---TCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCC---CCHHHHHHHHHHHHHhc
Confidence 33456666554433345566678888877765433222221 2223466666666432 356666665542
Q ss_pred CCceEEEEcCCC-CCcCcCCCHHHHHHHHcC
Q 014492 217 EKPKCIFLTSPN-NPDGSIINDEDLLKILEM 246 (423)
Q Consensus 217 ~~~~~i~l~~p~-NPtG~~~~~~~l~~i~~~ 246 (423)
.++..|+-+... .+...-.+.+++.+..+.
T Consensus 87 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~ 117 (255)
T 1fmc_A 87 GKVDILVNNAGGGGPKPFDMPMADFRRAYEL 117 (255)
T ss_dssp SSCCEEEECCCCCCCCCTTCCHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCCCCCHHHHHHHHHH
Confidence 367777765322 221123466666666554
No 297
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=34.83 E-value=1.7e+02 Score=25.38 Aligned_cols=99 Identities=5% Similarity=-0.066 Sum_probs=53.7
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCch----------hhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHh
Q 014492 145 ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT----------MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAV 214 (423)
Q Consensus 145 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~----------~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i 214 (423)
+...+++|.|+...=..+.+.|.+.|..|++..-.-. ......+..|.++..+..|-. |.+.+++.+
T Consensus 5 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~---~~~~v~~~~ 81 (274)
T 3e03_A 5 SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIR---EEDQVRAAV 81 (274)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTT---CHHHHHHHH
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCC---CHHHHHHHH
Confidence 3345666665543334555667888988776432221 122223345778888876532 556655554
Q ss_pred hc-----CCceEEEEcCCCCCcC--cCCCHHHHHHHHcC
Q 014492 215 ER-----EKPKCIFLTSPNNPDG--SIINDEDLLKILEM 246 (423)
Q Consensus 215 ~~-----~~~~~i~l~~p~NPtG--~~~~~~~l~~i~~~ 246 (423)
++ .++..++-+.-....+ .-.+.+++.+..+.
T Consensus 82 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~v 120 (274)
T 3e03_A 82 AATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQV 120 (274)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHH
T ss_pred HHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhH
Confidence 32 3677777553222222 23567777777664
No 298
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=34.13 E-value=1.7e+02 Score=25.30 Aligned_cols=101 Identities=14% Similarity=0.036 Sum_probs=55.2
Q ss_pred CCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCc---hhh---HHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc
Q 014492 143 GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF---TMY---EFDAAVNGAAVVKVPRKSDFSLNVELIADAVER 216 (423)
Q Consensus 143 g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y---~~~---~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~ 216 (423)
.++...+++|.|+...=..+...|.+.|..|++..-.- ... ....+..|.++..+..|- -|.+.+++.+++
T Consensus 8 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv---~d~~~v~~~~~~ 84 (262)
T 3ksu_A 8 DLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDL---SNEEEVAKLFDF 84 (262)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCC---CSHHHHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCC---CCHHHHHHHHHH
Confidence 34445666766655443455666888898887643211 111 122233577888887643 356666655532
Q ss_pred -----CCceEEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 217 -----EKPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 217 -----~~~~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
.++..++-+.-....+. -.+.+++.+..+.
T Consensus 85 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 121 (262)
T 3ksu_A 85 AEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTI 121 (262)
T ss_dssp HHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 36777765532222232 3467777777664
No 299
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=34.04 E-value=1.4e+02 Score=23.99 Aligned_cols=45 Identities=18% Similarity=0.113 Sum_probs=21.3
Q ss_pred HHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHH-hcCCCCeEEEcC
Q 014492 133 RLRAALAKDSGLESDHILVGCGADELIDLIMRC-VLDPGDKIVDCP 177 (423)
Q Consensus 133 ~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~-l~~~gd~Vl~~~ 177 (423)
.+++.+......+..-++++.|++..+..-+.. +..-|..+....
T Consensus 37 ~i~~~~~~i~~a~~~I~i~G~G~S~~~a~~~~~~l~~~g~~~~~~~ 82 (183)
T 2xhz_A 37 NFTLACEKMFWCKGKVVVMGMGASGHIGRKMAATFASTGTPSFFVH 82 (183)
T ss_dssp HHHHHHHHHHTCSSCEEEEECHHHHHHHHHHHHHHHTTTCCEEECC
T ss_pred HHHHHHHHHHhCCCeEEEEeecHHHHHHHHHHHHHHhcCceEEEeC
Confidence 455554444443213344677776655433332 334454454443
No 300
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=33.95 E-value=1.5e+02 Score=25.86 Aligned_cols=100 Identities=12% Similarity=0.066 Sum_probs=54.1
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCC-Cch---hhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc---
Q 014492 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPP-TFT---MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER--- 216 (423)
Q Consensus 144 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p-~y~---~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~--- 216 (423)
++...+++|.|+...=..+...|.+.|..|++..- .-. ......+..|.++..+..|- -|.+.+++.+++
T Consensus 26 l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~---~d~~~v~~~~~~~~~ 102 (269)
T 4dmm_A 26 LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADV---SQESEVEALFAAVIE 102 (269)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT---TSHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCC---CCHHHHHHHHHHHHH
Confidence 33445666655543334455667888988766432 222 12223334577777777543 355666555532
Q ss_pred --CCceEEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 217 --EKPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 217 --~~~~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
.++..++-+.-..+.+. -.+.+++.+..+.
T Consensus 103 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~v 136 (269)
T 4dmm_A 103 RWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDL 136 (269)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 36777775532222222 3467777777664
No 301
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=33.92 E-value=1.8e+02 Score=24.96 Aligned_cols=100 Identities=12% Similarity=0.032 Sum_probs=50.3
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CC
Q 014492 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (423)
Q Consensus 144 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~ 218 (423)
++...+++|.|+...=..+...|.+.|..|++..-.-.......+....++..+..| --|.+.+++.+++ .+
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D---~~d~~~v~~~~~~~~~~~g~ 86 (263)
T 3ak4_A 10 LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVD---VTKRASVDAAMQKAIDALGG 86 (263)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECC---TTCHHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEe---CCCHHHHHHHHHHHHHHcCC
Confidence 333456666655443345556677888888765433222333333332233344432 2356666655542 26
Q ss_pred ceEEEEcCCCCCcC--cCCCHHHHHHHHcC
Q 014492 219 PKCIFLTSPNNPDG--SIINDEDLLKILEM 246 (423)
Q Consensus 219 ~~~i~l~~p~NPtG--~~~~~~~l~~i~~~ 246 (423)
+..++-+.-..+.+ .-.+.+++.+..+.
T Consensus 87 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 116 (263)
T 3ak4_A 87 FDLLCANAGVSTMRPAVDITDEEWDFNFDV 116 (263)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHHH
Confidence 77777552222222 22466677766654
No 302
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=33.75 E-value=2.3e+02 Score=24.29 Aligned_cols=97 Identities=14% Similarity=0.093 Sum_probs=50.4
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHH---C-CCeEEEecCCCCCCCCHHHHHHHhhc-----C
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV---N-GAAVVKVPRKSDFSLNVELIADAVER-----E 217 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~---~-g~~~~~v~~~~~~~~d~~~l~~~i~~-----~ 217 (423)
..+++|.|+...=..+...|.+.|..|++..-.-.......+. . |.++..+..|- -|.+.+++.+++ .
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~g 84 (263)
T 3ai3_A 8 KVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDV---ATPEGVDAVVESVRSSFG 84 (263)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT---TSHHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCC---CCHHHHHHHHHHHHHHcC
Confidence 4566666554433455566778888877654332222222111 1 66676666542 356666655532 3
Q ss_pred CceEEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 218 KPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 218 ~~~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
++..++-+.-....+. -.+.+++.+..+.
T Consensus 85 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 115 (263)
T 3ai3_A 85 GADILVNNAGTGSNETIMEAADEKWQFYWEL 115 (263)
T ss_dssp SCSEEEECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 6777775532222222 2456666666553
No 303
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=33.64 E-value=1.1e+02 Score=26.55 Aligned_cols=95 Identities=15% Similarity=0.069 Sum_probs=53.7
Q ss_pred cEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CCceEE
Q 014492 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKCI 222 (423)
Q Consensus 148 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~i 222 (423)
.+++|.|+...=..+...|.+.|-.|++..-.-......+ ..+.++..+..|- -|.+++++.+++ .++..+
T Consensus 4 ~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~-~~~~~~~~~~~Dv---~~~~~v~~~v~~~~~~~g~iDiL 79 (247)
T 3ged_A 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFA-KERPNLFYFHGDV---ADPLTLKKFVEYAMEKLQRIDVL 79 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-TTCTTEEEEECCT---TSHHHHHHHHHHHHHHHSCCCEE
T ss_pred EEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhcCCEEEEEecC---CCHHHHHHHHHHHHHHcCCCCEE
Confidence 4666666554444555668889988877654433333322 2455666666542 345555554432 467777
Q ss_pred EEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 223 FLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 223 ~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
+-+--.++.+. -++.++++++.+.
T Consensus 80 VNNAG~~~~~~~~~~~~e~~~~~~~v 105 (247)
T 3ged_A 80 VNNACRGSKGILSSLLYEEFDYILSV 105 (247)
T ss_dssp EECCCCCCCCGGGTCCHHHHHHHHHH
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHH
Confidence 64433333343 3477888888775
No 304
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=33.31 E-value=1.8e+02 Score=26.67 Aligned_cols=80 Identities=15% Similarity=0.141 Sum_probs=49.9
Q ss_pred cCCCCeEEEcCCCchh-------hHH---HHHHCCCeEEEecCC-CC--C--CCC---HHHHHHHhhcCCceEEEEcCCC
Q 014492 167 LDPGDKIVDCPPTFTM-------YEF---DAAVNGAAVVKVPRK-SD--F--SLN---VELIADAVEREKPKCIFLTSPN 228 (423)
Q Consensus 167 ~~~gd~Vl~~~p~y~~-------~~~---~~~~~g~~~~~v~~~-~~--~--~~d---~~~l~~~i~~~~~~~i~l~~p~ 228 (423)
+++||+|-+.+|+.+. +.. ..+..|.+++.-+.- .. + +-| .++|.+++.++.+++|+...--
T Consensus 10 L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rGG 89 (336)
T 3sr3_A 10 LKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILEGSLTGRYDYYRSGSIQERAKELNALIRNPNVSCIMSTIGG 89 (336)
T ss_dssp CCTTCEEEEECSSSCHHHHCHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHHCTTEEEEEESCCC
T ss_pred CCCCCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEEcccccccccccCCCHHHHHHHHHHHhhCCCCCEEEEcccc
Confidence 6789999999998742 222 234589999887621 11 1 112 4566677777889999977555
Q ss_pred CCcCcCCCHHHHHHHHcC
Q 014492 229 NPDGSIINDEDLLKILEM 246 (423)
Q Consensus 229 NPtG~~~~~~~l~~i~~~ 246 (423)
.-+-.+++.=+...|.+.
T Consensus 90 ~g~~rlL~~lD~~~i~~~ 107 (336)
T 3sr3_A 90 MNSNSLLPYIDYDAFQNN 107 (336)
T ss_dssp SCGGGGGGGSCHHHHHHS
T ss_pred ccHHHHhhhcChhHHhhC
Confidence 445566554344455443
No 305
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=33.23 E-value=1.4e+02 Score=25.61 Aligned_cols=102 Identities=9% Similarity=-0.013 Sum_probs=54.7
Q ss_pred hCCCCCcEEEeCCHH-HHH-HHHHHHhcCCCCeEEEcCCCch-----hhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHh
Q 014492 142 SGLESDHILVGCGAD-ELI-DLIMRCVLDPGDKIVDCPPTFT-----MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAV 214 (423)
Q Consensus 142 ~g~~~~~i~~t~G~~-~al-~~~~~~l~~~gd~Vl~~~p~y~-----~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i 214 (423)
+.++...+++|.|+. .++ ..+...|.+.|..|++..-.-. ......+..|.++..+..|- -|.+.+++.+
T Consensus 16 ~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl---~~~~~v~~~~ 92 (267)
T 3gdg_A 16 LSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQV---DSYESCEKLV 92 (267)
T ss_dssp HCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCT---TCHHHHHHHH
T ss_pred cCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCC---CCHHHHHHHH
Confidence 445555677766551 333 3345557788888776533322 12222233577887777543 2566665554
Q ss_pred hc-----CCceEEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 215 ER-----EKPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 215 ~~-----~~~~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
++ .++..++-+....+.+. -.+.+++.+..+.
T Consensus 93 ~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~ 131 (267)
T 3gdg_A 93 KDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQV 131 (267)
T ss_dssp HHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHH
T ss_pred HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHh
Confidence 32 36777775532222222 2367777777664
No 306
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=33.21 E-value=95 Score=26.73 Aligned_cols=97 Identities=10% Similarity=0.067 Sum_probs=49.6
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHH---C--C-CeEEEecCCCCCCCCHHHHHHHhhc----
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV---N--G-AAVVKVPRKSDFSLNVELIADAVER---- 216 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~---~--g-~~~~~v~~~~~~~~d~~~l~~~i~~---- 216 (423)
..+++|.|+...=..+.+.|.+.|..|++..-.-.......+. . + .++..++.|- -|.+.+++.+++
T Consensus 8 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv---~~~~~v~~~~~~~~~~ 84 (250)
T 3nyw_A 8 GLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDI---TDCTKADTEIKDIHQK 84 (250)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCT---TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccC---CCHHHHHHHHHHHHHh
Confidence 3456665554333445556777888887765444333332221 1 2 4555555432 255666555432
Q ss_pred -CCceEEEEcCCCCCcC-cCCCHHHHHHHHcC
Q 014492 217 -EKPKCIFLTSPNNPDG-SIINDEDLLKILEM 246 (423)
Q Consensus 217 -~~~~~i~l~~p~NPtG-~~~~~~~l~~i~~~ 246 (423)
.++..++-+.-....+ .-.+.+++.+..+.
T Consensus 85 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~v 116 (250)
T 3nyw_A 85 YGAVDILVNAAAMFMDGSLSEPVDNFRKIMEI 116 (250)
T ss_dssp HCCEEEEEECCCCCCCCCCSCHHHHHHHHHHH
T ss_pred cCCCCEEEECCCcCCCCCCCCCHHHHHHHHHH
Confidence 3677777553222222 23455667666654
No 307
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=33.09 E-value=1.4e+02 Score=26.01 Aligned_cols=95 Identities=9% Similarity=0.059 Sum_probs=51.5
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCC------------chhhH---HHHHHCCCeEEEecCCCCCCCCHHHHH
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPT------------FTMYE---FDAAVNGAAVVKVPRKSDFSLNVELIA 211 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~------------y~~~~---~~~~~~g~~~~~v~~~~~~~~d~~~l~ 211 (423)
..+++|.|+...=..+...|.+.|..|++..-. -.... ...+..|.++..+..|- -|.+.++
T Consensus 14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~v~ 90 (278)
T 3sx2_A 14 KVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADV---RDRESLS 90 (278)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCT---TCHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCC---CCHHHHH
Confidence 456666655543345566678889887764322 11111 12233567777777543 3566666
Q ss_pred HHhhc-----CCceEEEEcCCCCCcCcCCCHHHHHHHHcC
Q 014492 212 DAVER-----EKPKCIFLTSPNNPDGSIINDEDLLKILEM 246 (423)
Q Consensus 212 ~~i~~-----~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~ 246 (423)
+.+++ .++..++-+.-..+.+. +.+++.+..+.
T Consensus 91 ~~~~~~~~~~g~id~lv~nAg~~~~~~--~~~~~~~~~~~ 128 (278)
T 3sx2_A 91 AALQAGLDELGRLDIVVANAGIAPMSA--GDDGWHDVIDV 128 (278)
T ss_dssp HHHHHHHHHHCCCCEEEECCCCCCCSS--THHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCC--CHHHHHHHHHH
Confidence 55542 36777775533222222 46677776654
No 308
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=32.97 E-value=2.2e+02 Score=24.42 Aligned_cols=97 Identities=18% Similarity=0.020 Sum_probs=49.5
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CCceE
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKC 221 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~ 221 (423)
..+++|.|+...=..+.+.|.+.|..|++..-.-.......+..+.++..+..| --|.+.+++.+++ .++..
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D---~~~~~~v~~~~~~~~~~~g~iD~ 84 (260)
T 1nff_A 8 KVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLD---VTQPAQWKAAVDTAVTAFGGLHV 84 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECC---TTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEec---CCCHHHHHHHHHHHHHHcCCCCE
Confidence 356666555433345556677889887765433222233333333334445443 2356666665542 26777
Q ss_pred EEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 222 IFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 222 i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
++-+......+. -.+.+++.+..+.
T Consensus 85 lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 111 (260)
T 1nff_A 85 LVNNAGILNIGTIEDYALTEWQRILDV 111 (260)
T ss_dssp EEECCCCCCCBCTTTSCHHHHHHHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 775532222222 2456777666654
No 309
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=32.86 E-value=2.4e+02 Score=24.36 Aligned_cols=99 Identities=12% Similarity=0.044 Sum_probs=52.5
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHH---HHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----
Q 014492 145 ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVER----- 216 (423)
Q Consensus 145 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~----- 216 (423)
+...+++|.|+...=..+...|.+.|..|++..-.-...... .+..|.++..+..|- -|.+.+++.++.
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~ 96 (273)
T 1ae1_A 20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDL---LSRTERDKLMQTVAHVF 96 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT---TCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCC---CCHHHHHHHHHHHHHHc
Confidence 334566666655443455566778888877654332222222 223466676666542 355666555432
Q ss_pred -CCceEEEEcCCCCCcC--cCCCHHHHHHHHcC
Q 014492 217 -EKPKCIFLTSPNNPDG--SIINDEDLLKILEM 246 (423)
Q Consensus 217 -~~~~~i~l~~p~NPtG--~~~~~~~l~~i~~~ 246 (423)
.++..++-+....+.+ .-.+.+++.+..+.
T Consensus 97 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 129 (273)
T 1ae1_A 97 DGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGT 129 (273)
T ss_dssp TSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 4677777553222222 22466777776654
No 310
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=32.72 E-value=2.1e+02 Score=25.23 Aligned_cols=99 Identities=8% Similarity=0.093 Sum_probs=54.1
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCC------------chh---hHHHHHHCCCeEEEecCCCCCCCCHHH
Q 014492 145 ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT------------FTM---YEFDAAVNGAAVVKVPRKSDFSLNVEL 209 (423)
Q Consensus 145 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~------------y~~---~~~~~~~~g~~~~~v~~~~~~~~d~~~ 209 (423)
+...+++|.|+...=..+...|.+.|..|++..-. -.. .....+..|.++..+..|- -|.+.
T Consensus 27 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv---~~~~~ 103 (299)
T 3t7c_A 27 EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDV---RDFDA 103 (299)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCT---TCHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCC---CCHHH
Confidence 33456666655543344556678889887764322 111 1122334677887777543 35666
Q ss_pred HHHHhhc-----CCceEEEEcCCCCCcCc---CCCHHHHHHHHcC
Q 014492 210 IADAVER-----EKPKCIFLTSPNNPDGS---IINDEDLLKILEM 246 (423)
Q Consensus 210 l~~~i~~-----~~~~~i~l~~p~NPtG~---~~~~~~l~~i~~~ 246 (423)
+++.+++ .++..++-+.-....+. -.+.+++.+..+.
T Consensus 104 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~v 148 (299)
T 3t7c_A 104 MQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDV 148 (299)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHH
Confidence 6655532 36777775532222222 3477788777764
No 311
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=32.62 E-value=1.1e+02 Score=26.77 Aligned_cols=98 Identities=11% Similarity=0.064 Sum_probs=52.9
Q ss_pred CCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCC----------------chhhH---HHHHHCCCeEEEecCCCCCCCC
Q 014492 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT----------------FTMYE---FDAAVNGAAVVKVPRKSDFSLN 206 (423)
Q Consensus 146 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~----------------y~~~~---~~~~~~g~~~~~v~~~~~~~~d 206 (423)
...+++|.|+...=..+.+.|.+.|..|++..-. -.... ...+..|.++..+..|- -|
T Consensus 11 ~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv---~~ 87 (286)
T 3uve_A 11 GKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDV---RD 87 (286)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCT---TC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCC---CC
Confidence 3456666665543345566678889888764322 11111 12233567777777543 35
Q ss_pred HHHHHHHhhc-----CCceEEEEcCCCCCcCc---CCCHHHHHHHHcC
Q 014492 207 VELIADAVER-----EKPKCIFLTSPNNPDGS---IINDEDLLKILEM 246 (423)
Q Consensus 207 ~~~l~~~i~~-----~~~~~i~l~~p~NPtG~---~~~~~~l~~i~~~ 246 (423)
.+.+++.+++ .++..++-+.-....+. -.+.+++.+..+.
T Consensus 88 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~ 135 (286)
T 3uve_A 88 YDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDI 135 (286)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHH
Confidence 5666555432 36777775532222222 3467777777664
No 312
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=32.43 E-value=2.2e+02 Score=24.55 Aligned_cols=99 Identities=10% Similarity=0.052 Sum_probs=52.9
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHH---H-CCC-eEEEecCCCCCCCCHHHHHHHhhc---
Q 014492 145 ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA---V-NGA-AVVKVPRKSDFSLNVELIADAVER--- 216 (423)
Q Consensus 145 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~---~-~g~-~~~~v~~~~~~~~d~~~l~~~i~~--- 216 (423)
+...+++|.|+...=..+...|.+.|..|++..-.-.......+ . .+. ++..+..|- -|.+.+++.+++
T Consensus 7 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv---~~~~~v~~~~~~~~~ 83 (265)
T 3lf2_A 7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDV---LDALQVRAFAEACER 83 (265)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCT---TCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCC---CCHHHHHHHHHHHHH
Confidence 33456666665544345566678889888776544332222221 1 333 466666542 345555554432
Q ss_pred --CCceEEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 217 --EKPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 217 --~~~~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
.++..++-+.-..+.+. -.+.+++.+..+.
T Consensus 84 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 117 (265)
T 3lf2_A 84 TLGCASILVNNAGQGRVSTFAETTDEAWSEELQL 117 (265)
T ss_dssp HHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 36777775533333332 3567777777664
No 313
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=32.42 E-value=1.9e+02 Score=25.04 Aligned_cols=97 Identities=12% Similarity=0.052 Sum_probs=50.2
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CCceE
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKC 221 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~ 221 (423)
..+++|.|+...=..+...|.+.|..|++..-.-.......+..+.++..+..|- -|.+++++.+++ .++..
T Consensus 7 k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~---~~~~~v~~~~~~~~~~~g~iD~ 83 (263)
T 2a4k_A 7 KTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADV---SDPKAVEAVFAEALEEFGRLHG 83 (263)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCT---TSHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCC---CCHHHHHHHHHHHHHHcCCCcE
Confidence 4566665554333455556778888877654433333334444444566665432 356666655532 35777
Q ss_pred EEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 222 IFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 222 i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
++-+.-....+. -.+.++++++.+.
T Consensus 84 lvnnAg~~~~~~~~~~~~~~~~~~~~~ 110 (263)
T 2a4k_A 84 VAHFAGVAHSALSWNLPLEAWEKVLRV 110 (263)
T ss_dssp EEEGGGGTTTTC----CHHHHHHHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 775522222222 2355666665553
No 314
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=32.31 E-value=2.4e+02 Score=24.15 Aligned_cols=88 Identities=9% Similarity=0.020 Sum_probs=52.1
Q ss_pred EEEeCCHHHHHHHHHHHhcCCC---CeE-EEcCCCchhhHHHHHHCCCeEEEecCCCCCCCC----HHHHHHHhhcCCce
Q 014492 149 ILVGCGADELIDLIMRCVLDPG---DKI-VDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLN----VELIADAVEREKPK 220 (423)
Q Consensus 149 i~~t~G~~~al~~~~~~l~~~g---d~V-l~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d----~~~l~~~i~~~~~~ 220 (423)
+++.+|+.+.+..++..+.+.. +.+ ++.++.-......|+..|+.+..++.. ++. + -+++.+.+.+.++.
T Consensus 26 ~~l~SG~g~~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~gIp~~~~~~~-~~~-~r~~~~~~~~~~l~~~~~D 103 (229)
T 3auf_A 26 GVLISGSGTNLQAILDGCREGRIPGRVAVVISDRADAYGLERARRAGVDALHMDPA-AYP-SRTAFDAALAERLQAYGVD 103 (229)
T ss_dssp EEEESSCCHHHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHTTCEEEECCGG-GSS-SHHHHHHHHHHHHHHTTCS
T ss_pred EEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHcCCCEEEECcc-ccc-chhhccHHHHHHHHhcCCC
Confidence 4555666667777777776542 222 233322223345678899998876532 111 1 13455566667899
Q ss_pred EEEEcCCCCCcCcCCCHHHHHH
Q 014492 221 CIFLTSPNNPDGSIINDEDLLK 242 (423)
Q Consensus 221 ~i~l~~p~NPtG~~~~~~~l~~ 242 (423)
++++.. .|.+++.+-+..
T Consensus 104 liv~ag----y~~IL~~~~l~~ 121 (229)
T 3auf_A 104 LVCLAG----YMRLVRGPMLTA 121 (229)
T ss_dssp EEEESS----CCSCCCHHHHHH
T ss_pred EEEEcC----hhHhCCHHHHhh
Confidence 988764 467888876644
No 315
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=32.30 E-value=2.3e+02 Score=23.98 Aligned_cols=98 Identities=11% Similarity=0.046 Sum_probs=54.0
Q ss_pred CCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHH---HHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----C
Q 014492 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVER-----E 217 (423)
Q Consensus 146 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~ 217 (423)
...+++|.|+...=..+.+.|.+.|..|++....-...... .+..+.++..+..|- -|.+.+++.+++ .
T Consensus 9 ~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~g 85 (253)
T 3qiv_A 9 NKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDV---SDPESAKAMADRTLAEFG 85 (253)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCT---TSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccC---CCHHHHHHHHHHHHHHcC
Confidence 34566666655444455666788898887755444332222 233577777777543 355666555532 3
Q ss_pred CceEEEEcCCC---CCcC--cCCCHHHHHHHHcC
Q 014492 218 KPKCIFLTSPN---NPDG--SIINDEDLLKILEM 246 (423)
Q Consensus 218 ~~~~i~l~~p~---NPtG--~~~~~~~l~~i~~~ 246 (423)
++..++-+.-. .+.+ .-.+.+++.+..+.
T Consensus 86 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ 119 (253)
T 3qiv_A 86 GIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSV 119 (253)
T ss_dssp CCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHH
T ss_pred CCCEEEECCCcCCCCCCcccccCCHHHHHHHHhh
Confidence 67777755221 1111 13467777776654
No 316
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=32.25 E-value=1.3e+02 Score=27.05 Aligned_cols=96 Identities=9% Similarity=0.032 Sum_probs=52.5
Q ss_pred CcEEEeCCHHHHH-HHHHHHhcCCCCeEEEcCCC----------ch---hhHHHHHHCCCeEEEecCCCCCCCCHHHHHH
Q 014492 147 DHILVGCGADELI-DLIMRCVLDPGDKIVDCPPT----------FT---MYEFDAAVNGAAVVKVPRKSDFSLNVELIAD 212 (423)
Q Consensus 147 ~~i~~t~G~~~al-~~~~~~l~~~gd~Vl~~~p~----------y~---~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~ 212 (423)
..+++|.|+ .+| ..+...|.+.|..|++..-. -. ......+..|.++..+..|- -|.+.+++
T Consensus 28 k~vlVTGas-~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv---~d~~~v~~ 103 (322)
T 3qlj_A 28 RVVIVTGAG-GGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNV---ADWDQAAG 103 (322)
T ss_dssp CEEEETTTT-SHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCT---TSHHHHHH
T ss_pred CEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCC---CCHHHHHH
Confidence 445555554 455 44555678889888765432 11 22223344677888877543 35666655
Q ss_pred Hhhc-----CCceEEEEcCCCCCcC--cCCCHHHHHHHHcC
Q 014492 213 AVER-----EKPKCIFLTSPNNPDG--SIINDEDLLKILEM 246 (423)
Q Consensus 213 ~i~~-----~~~~~i~l~~p~NPtG--~~~~~~~l~~i~~~ 246 (423)
.+++ .++..++-+.-....+ .-.+.+++.+..+.
T Consensus 104 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~v 144 (322)
T 3qlj_A 104 LIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAV 144 (322)
T ss_dssp HHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 5532 3677776442222222 23467777777664
No 317
>1jr2_A Uroporphyrinogen-III synthase; heme biosynthesis, HEAM biosynthesis, lyase; 1.84A {Homo sapiens} SCOP: c.113.1.1
Probab=32.22 E-value=46 Score=29.61 Aligned_cols=87 Identities=13% Similarity=0.078 Sum_probs=51.4
Q ss_pred HhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCc--hhhHHHHHHCCCeEEEecCCCC-CCCC-HHHHHHHhhc
Q 014492 141 DSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF--TMYEFDAAVNGAAVVKVPRKSD-FSLN-VELIADAVER 216 (423)
Q Consensus 141 ~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y--~~~~~~~~~~g~~~~~v~~~~~-~~~d-~~~l~~~i~~ 216 (423)
.+|+.+ ++...+..+++...+.....+|.+|+++.+.- .......+..|+++..++.-.. ...+ .+.+.+.+.+
T Consensus 130 ~~G~~~--~~p~~~~ae~L~~~l~~~~~~g~~vLi~rg~~~r~~L~~~L~~~G~~v~~~~~Y~~~~~~~~~~~~~~~l~~ 207 (286)
T 1jr2_A 130 KIGLDT--EGETCGNAEKLAEYICSRESSALPLLFPCGNLKREILPKALKDKGIAMESITVYQTVAHPGIQGNLNSYYSQ 207 (286)
T ss_dssp HTTCCC--SCCSCSSHHHHHHHHHTSCCCSSCEEEEESCGGGCCHHHHHHTTTCCEEEEECEEEEECTTHHHHHHHHHHH
T ss_pred HcCCCc--CCCCccCHHHHHHHHHhcccCCCeEEEECChhhHHHHHHHHHHCCCeeEEEEEEEEeeCCCcHHHHHHHHHh
Confidence 467654 33455566666555543334577888876654 3456667778999888873111 0112 3456565643
Q ss_pred -CCceEEEEcCCCC
Q 014492 217 -EKPKCIFLTSPNN 229 (423)
Q Consensus 217 -~~~~~i~l~~p~N 229 (423)
.+..+|++++|+.
T Consensus 208 ~~~~d~v~ftS~~~ 221 (286)
T 1jr2_A 208 QGVPASITFFSPSG 221 (286)
T ss_dssp HCSCSEEEESSHHH
T ss_pred CCCCCEEEEEChHH
Confidence 4677888776653
No 318
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=32.09 E-value=2.7e+02 Score=24.60 Aligned_cols=18 Identities=28% Similarity=0.414 Sum_probs=7.3
Q ss_pred HHHhhcCCceEEEEcCCC
Q 014492 211 ADAVEREKPKCIFLTSPN 228 (423)
Q Consensus 211 ~~~i~~~~~~~i~l~~p~ 228 (423)
.+.+++...+.|+++.|+
T Consensus 143 ~~~~~~~gl~~I~lvap~ 160 (271)
T 3nav_A 143 VAAAEKFGIQPIFIAPPT 160 (271)
T ss_dssp HHHHHHTTCEEEEEECTT
T ss_pred HHHHHHcCCeEEEEECCC
Confidence 333333344444444443
No 319
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=31.93 E-value=2e+02 Score=25.11 Aligned_cols=96 Identities=14% Similarity=0.026 Sum_probs=53.0
Q ss_pred CcEEEeCCHHHHH-HHHHHHhcCCCCeEEEcCCCchhhHHHHHH---CCCeEEEecCCCCCCCCHHHHHHHhhc-----C
Q 014492 147 DHILVGCGADELI-DLIMRCVLDPGDKIVDCPPTFTMYEFDAAV---NGAAVVKVPRKSDFSLNVELIADAVER-----E 217 (423)
Q Consensus 147 ~~i~~t~G~~~al-~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~---~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~ 217 (423)
..+++|.|+ .+| ..+.+.|.+.|..|++..-.-.......+. .|.++..+..|- -|.+.+++.++. .
T Consensus 9 k~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv---~~~~~v~~~~~~~~~~~g 84 (280)
T 3tox_A 9 KIAIVTGAS-SGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDV---GDEALHEALVELAVRRFG 84 (280)
T ss_dssp CEEEESSTT-SHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCT---TCHHHHHHHHHHHHHHHS
T ss_pred CEEEEECCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCC---CCHHHHHHHHHHHHHHcC
Confidence 345555554 455 445566788898888766544333333322 466777776543 345665555432 3
Q ss_pred CceEEEEcCC-CCCcCc--CCCHHHHHHHHcC
Q 014492 218 KPKCIFLTSP-NNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 218 ~~~~i~l~~p-~NPtG~--~~~~~~l~~i~~~ 246 (423)
++..++-+.- ..+.+. -.+.+++.+..+.
T Consensus 85 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~v 116 (280)
T 3tox_A 85 GLDTAFNNAGALGAMGEISSLSVEGWRETLDT 116 (280)
T ss_dssp CCCEEEECCCCCCSCSCGGGCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHHH
Confidence 6777775422 222232 3467777777664
No 320
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=31.88 E-value=2.2e+02 Score=24.10 Aligned_cols=86 Identities=14% Similarity=0.100 Sum_probs=51.0
Q ss_pred EEEeCCHHHHHHHHHHHhcCCCC--eE--EEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCH----HHHHHHhhcCCce
Q 014492 149 ILVGCGADELIDLIMRCVLDPGD--KI--VDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNV----ELIADAVEREKPK 220 (423)
Q Consensus 149 i~~t~G~~~al~~~~~~l~~~gd--~V--l~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~----~~l~~~i~~~~~~ 220 (423)
+++.+|+.+.+..++..+.+.+- .| ++.++.-......|+..|+.+..++.. ++. +- +++.+.+.+.++.
T Consensus 5 ~vl~SG~g~~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~-~~~-~r~~~~~~~~~~l~~~~~D 82 (216)
T 2ywr_A 5 GVLVSGRGSNLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKHNVECKVIQRK-EFP-SKKEFEERMALELKKKGVE 82 (216)
T ss_dssp EEEECSCCHHHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHHTCCEEECCGG-GSS-SHHHHHHHHHHHHHHTTCC
T ss_pred EEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHcCCCEEEeCcc-ccc-chhhhhHHHHHHHHhcCCC
Confidence 35655655666677777766542 22 344443333456677889998876532 111 21 3455566667899
Q ss_pred EEEEcCCCCCcCcCCCHHHH
Q 014492 221 CIFLTSPNNPDGSIINDEDL 240 (423)
Q Consensus 221 ~i~l~~p~NPtG~~~~~~~l 240 (423)
++++.. .|.+++.+-+
T Consensus 83 liv~a~----y~~il~~~~l 98 (216)
T 2ywr_A 83 LVVLAG----FMRILSHNFL 98 (216)
T ss_dssp EEEESS----CCSCCCHHHH
T ss_pred EEEEeC----chhhCCHHHH
Confidence 888754 4677877655
No 321
>2v94_A RPS24, 30S ribosomal protein S24E; ribonucleoprotein; 1.90A {Pyrococcus abyssi} SCOP: d.12.1.3
Probab=31.81 E-value=35 Score=25.64 Aligned_cols=26 Identities=15% Similarity=0.410 Sum_probs=21.8
Q ss_pred CCcchHHHHHHHHHHhCCCCCcEEEe
Q 014492 127 PDPESRRLRAALAKDSGLESDHILVG 152 (423)
Q Consensus 127 ~~~g~~~lr~~ia~~~g~~~~~i~~t 152 (423)
+.+.-.++|+.||+.++++++.|++-
T Consensus 37 ~tpsk~eirekLA~~~~~~~d~Vvv~ 62 (107)
T 2v94_A 37 PTPSRKDVKGKLVAMLDLNPETTVIQ 62 (107)
T ss_dssp CCCCHHHHHHHHHHHHTCCGGGEEEE
T ss_pred CCCCHHHHHHHHHHHHCCCCCEEEEE
Confidence 45567899999999999999888764
No 322
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=31.43 E-value=2.6e+02 Score=24.42 Aligned_cols=100 Identities=10% Similarity=-0.030 Sum_probs=55.2
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHH---HCCCeEEEecCCCCCCCCHHHHHHHhhc----
Q 014492 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA---VNGAAVVKVPRKSDFSLNVELIADAVER---- 216 (423)
Q Consensus 144 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~---~~g~~~~~v~~~~~~~~d~~~l~~~i~~---- 216 (423)
.+...+++|.|+...=..+...|.+.|..|++..-.-.......+ ..|.++..+..|- -|.+++++.+++
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv---~d~~~v~~~~~~~~~~ 102 (283)
T 3v8b_A 26 QPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADV---SDELQMRNAVRDLVLK 102 (283)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCT---TCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccC---CCHHHHHHHHHHHHHH
Confidence 344456666665544445556678889888776544433333322 2466777777543 356666655542
Q ss_pred -CCceEEEEcCCC-CCcCc--CCCHHHHHHHHcC
Q 014492 217 -EKPKCIFLTSPN-NPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 217 -~~~~~i~l~~p~-NPtG~--~~~~~~l~~i~~~ 246 (423)
.++..++-+.-. .+.+. -.+.+++.+..+.
T Consensus 103 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~v 136 (283)
T 3v8b_A 103 FGHLDIVVANAGINGVWAPIDDLKPFEWDETIAV 136 (283)
T ss_dssp HSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHH
T ss_pred hCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHH
Confidence 367777755222 22122 3567777777664
No 323
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=31.40 E-value=69 Score=28.24 Aligned_cols=76 Identities=16% Similarity=0.129 Sum_probs=45.9
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CCceE
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKC 221 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~ 221 (423)
..+++|.|+...=..+.+.|.+.|..|++..-.-.......+..+.++..+..|- -|.+.+++.+++ .++..
T Consensus 6 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv---~~~~~v~~~~~~~~~~~g~iD~ 82 (281)
T 3zv4_A 6 EVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDV---RSLQDQKRAAERCLAAFGKIDT 82 (281)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCT---TCHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCC---CCHHHHHHHHHHHHHhcCCCCE
Confidence 4566666655444455566788898888766555445555555677777777542 355655554432 36676
Q ss_pred EEEc
Q 014492 222 IFLT 225 (423)
Q Consensus 222 i~l~ 225 (423)
++-+
T Consensus 83 lvnn 86 (281)
T 3zv4_A 83 LIPN 86 (281)
T ss_dssp EECC
T ss_pred EEEC
Confidence 6644
No 324
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=31.33 E-value=1.8e+02 Score=24.58 Aligned_cols=99 Identities=14% Similarity=0.160 Sum_probs=49.5
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHH---HHCC-CeEEEecCCCCCCCCHHHHHHHhhc-----C
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA---AVNG-AAVVKVPRKSDFSLNVELIADAVER-----E 217 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~g-~~~~~v~~~~~~~~d~~~l~~~i~~-----~ 217 (423)
..+++|.|+...=..+.+.|.+.|..|++..-.-....... +..+ .++..+..+-+ .-|.+.+++.++. .
T Consensus 15 k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d-~~~~~~~~~~~~~~~~~~g 93 (247)
T 3i1j_A 15 RVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLE-NATAQQYRELAARVEHEFG 93 (247)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTT-TCCHHHHHHHHHHHHHHHS
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccc-cCCHHHHHHHHHHHHHhCC
Confidence 35566555543334455667888988877654443322222 2222 33333332221 2345555554432 3
Q ss_pred CceEEEEcCC-CCCcCc--CCCHHHHHHHHcC
Q 014492 218 KPKCIFLTSP-NNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 218 ~~~~i~l~~p-~NPtG~--~~~~~~l~~i~~~ 246 (423)
++..++-+.. ..+.+. -.+.+++.+..+.
T Consensus 94 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~ 125 (247)
T 3i1j_A 94 RLDGLLHNASIIGPRTPLEQLPDEDFMQVMHV 125 (247)
T ss_dssp CCSEEEECCCCCCCCSCGGGSCHHHHHHHHHH
T ss_pred CCCEEEECCccCCCCCCcccCCHHHHHHHHHH
Confidence 6777775532 223332 3467777777664
No 325
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=31.06 E-value=35 Score=31.59 Aligned_cols=83 Identities=12% Similarity=0.063 Sum_probs=46.3
Q ss_pred cEEEeCCHHHHHHHHHHHh-cCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcC
Q 014492 148 HILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTS 226 (423)
Q Consensus 148 ~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~ 226 (423)
.|+-++++..++.++..+- ++-.-.|+++.-.-..-....+.+|++++.++...+...+.....+... ..+...++..
T Consensus 89 ~Vv~aSsGN~g~alA~~aa~~G~~~~IvmP~~~~~~k~~~~~~~GA~Vv~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 167 (344)
T 3vc3_A 89 TLIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGAELILTDPAKGMGGTVKKAYELLE-NTPNAHMLQQ 167 (344)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHH-HSTTEECCCT
T ss_pred EEEEeCCcHHHHHHHHHHHHcCCcEEEEECCCChHHHHHHHHHcCCEEEEECCCCcchHHHHHHHHHHh-hccCceeccc
Confidence 5777777777877776543 2222345555544445556678899999998743221111222222222 3456666655
Q ss_pred CCCCc
Q 014492 227 PNNPD 231 (423)
Q Consensus 227 p~NPt 231 (423)
..||.
T Consensus 168 ~~np~ 172 (344)
T 3vc3_A 168 FSNPA 172 (344)
T ss_dssp TTCHH
T ss_pred cccch
Confidence 56663
No 326
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=31.01 E-value=2e+02 Score=25.12 Aligned_cols=100 Identities=12% Similarity=0.024 Sum_probs=54.6
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCc-hhhHHHHH---H-CCCeEEEecCCCCCCCCHHHHHHHhhc--
Q 014492 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF-TMYEFDAA---V-NGAAVVKVPRKSDFSLNVELIADAVER-- 216 (423)
Q Consensus 144 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y-~~~~~~~~---~-~g~~~~~v~~~~~~~~d~~~l~~~i~~-- 216 (423)
.....+++|.|+...=..+...|.+.|..|++..-.- .......+ . .+.++..+..|- -|.+.+++.+++
T Consensus 23 l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv---~d~~~v~~~~~~~~ 99 (281)
T 3v2h_A 23 MMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADM---TKPSEIADMMAMVA 99 (281)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCT---TCHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCC---CCHHHHHHHHHHHH
Confidence 3334566766665444455566788898887765422 22222221 1 266777776543 355666655532
Q ss_pred ---CCceEEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 217 ---EKPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 217 ---~~~~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
.++..++-+.-..+.+. -.+.+++.+..+.
T Consensus 100 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~v 134 (281)
T 3v2h_A 100 DRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAV 134 (281)
T ss_dssp HHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 36777775533222332 2467777777664
No 327
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=30.87 E-value=2.3e+02 Score=24.18 Aligned_cols=96 Identities=16% Similarity=0.063 Sum_probs=49.8
Q ss_pred cEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHH---HHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CCc
Q 014492 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKP 219 (423)
Q Consensus 148 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~ 219 (423)
.+++|.|+...=..+...|.+.|..|++..-.-...... .+..|.++..+..|- -|.+.+++.+++ .++
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~v~~~~~~~~~~~g~i 80 (256)
T 1geg_A 4 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDV---SDRDQVFAAVEQARKTLGGF 80 (256)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT---TSHHHHHHHHHHHHHHTTCC
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecC---CCHHHHHHHHHHHHHHhCCC
Confidence 355655544333445556778888877654332222222 223466676666542 356666655542 267
Q ss_pred eEEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 220 KCIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 220 ~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
..++-+.-..+.+. -.+.+++.+..+.
T Consensus 81 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 109 (256)
T 1geg_A 81 DVIVNNAGVAPSTPIESITPEIVDKVYNI 109 (256)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 77775532222222 2456777666654
No 328
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=30.56 E-value=2.3e+02 Score=24.47 Aligned_cols=100 Identities=9% Similarity=0.068 Sum_probs=54.8
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCC-Cch---hhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc---
Q 014492 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPP-TFT---MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER--- 216 (423)
Q Consensus 144 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p-~y~---~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~--- 216 (423)
++...+++|.|+...=..+.+.|.+.|..|++..- .-. ......+..|.++..+..|- -|.+.+++.+++
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~v~~~~~~~~~ 103 (271)
T 4iin_A 27 FTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDA---ASESDFIEAIQTIVQ 103 (271)
T ss_dssp CSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT---TCHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCC---CCHHHHHHHHHHHHH
Confidence 34456666666554434556667888987766443 222 12223344677777777543 345555555432
Q ss_pred --CCceEEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 217 --EKPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 217 --~~~~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
.++..++-+......+. -.+.+++.+..+.
T Consensus 104 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~ 137 (271)
T 4iin_A 104 SDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDN 137 (271)
T ss_dssp HHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred hcCCCCEEEECCCcCCCcccccCCHHHHHHHHHh
Confidence 36777776533222222 3467777777664
No 329
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=30.39 E-value=2.5e+02 Score=23.69 Aligned_cols=88 Identities=14% Similarity=0.098 Sum_probs=51.8
Q ss_pred EEeCCHHHHHHHHHHHhcCC--CCeE--EEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCH----HHHHHHhhcCCceE
Q 014492 150 LVGCGADELIDLIMRCVLDP--GDKI--VDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNV----ELIADAVEREKPKC 221 (423)
Q Consensus 150 ~~t~G~~~al~~~~~~l~~~--gd~V--l~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~----~~l~~~i~~~~~~~ 221 (423)
++.+|+.+.+..++..+... +-.| ++.++.-......|+..|+.+..++.. ++ -+. +++.+.+.+.++.+
T Consensus 8 vl~sG~g~~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~gIp~~~~~~~-~~-~~~~~~~~~~~~~l~~~~~Dl 85 (212)
T 3av3_A 8 VFASGSGTNFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARENVPAFVFSPK-DY-PSKAAFESEILRELKGRQIDW 85 (212)
T ss_dssp EECCSSCHHHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHTTCCEEECCGG-GS-SSHHHHHHHHHHHHHHTTCCE
T ss_pred EEEECCcHHHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHcCCCEEEeCcc-cc-cchhhhHHHHHHHHHhcCCCE
Confidence 45556555666777777654 2222 344433334456678899998876532 11 122 24555666678998
Q ss_pred EEEcCCCCCcCcCCCHHHHHHH
Q 014492 222 IFLTSPNNPDGSIINDEDLLKI 243 (423)
Q Consensus 222 i~l~~p~NPtG~~~~~~~l~~i 243 (423)
+++.. -|.+++.+-+...
T Consensus 86 iv~a~----y~~il~~~~l~~~ 103 (212)
T 3av3_A 86 IALAG----YMRLIGPTLLSAY 103 (212)
T ss_dssp EEESS----CCSCCCHHHHHHT
T ss_pred EEEch----hhhhCCHHHHhhh
Confidence 88754 4678888766443
No 330
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=30.35 E-value=2.2e+02 Score=24.35 Aligned_cols=96 Identities=10% Similarity=0.076 Sum_probs=51.5
Q ss_pred CcEEEeCCHHHHH-HHHHHHhcCCCCeEEEcCCCchhhHHHHH---HCCCeEEEecCCCCCCCCHHHHHHHhhc-----C
Q 014492 147 DHILVGCGADELI-DLIMRCVLDPGDKIVDCPPTFTMYEFDAA---VNGAAVVKVPRKSDFSLNVELIADAVER-----E 217 (423)
Q Consensus 147 ~~i~~t~G~~~al-~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~---~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~ 217 (423)
..+++|.|+ .+| ..+.+.|.+.|..|++..-.-.......+ ..+.++..+..|- -|.+.+++.+++ .
T Consensus 7 k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv---~~~~~v~~~~~~~~~~~g 82 (257)
T 3imf_A 7 KVVIITGGS-SGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDV---RNTDDIQKMIEQIDEKFG 82 (257)
T ss_dssp CEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCT---TCHHHHHHHHHHHHHHHS
T ss_pred CEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccC---CCHHHHHHHHHHHHHHcC
Confidence 345555544 455 44555677889888775544333333222 2456777776542 345665555432 3
Q ss_pred CceEEEEcCCCCCcC--cCCCHHHHHHHHcC
Q 014492 218 KPKCIFLTSPNNPDG--SIINDEDLLKILEM 246 (423)
Q Consensus 218 ~~~~i~l~~p~NPtG--~~~~~~~l~~i~~~ 246 (423)
++..++-+.-....+ .-.+.+++.+..+.
T Consensus 83 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 113 (257)
T 3imf_A 83 RIDILINNAAGNFICPAEDLSVNGWNSVINI 113 (257)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 677777552222222 23567777776664
No 331
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=30.21 E-value=2.5e+02 Score=24.52 Aligned_cols=97 Identities=11% Similarity=0.153 Sum_probs=50.3
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHH----CCCeEEEecCCCCCCCCHHHHHHHhhc-----C
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV----NGAAVVKVPRKSDFSLNVELIADAVER-----E 217 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~----~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~ 217 (423)
..+++|.|+...=..+...|.+.|..|++..-.-.......+. .+.++..+..|- -|.+.+++.+++ .
T Consensus 27 k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl---~~~~~~~~~~~~~~~~~g 103 (302)
T 1w6u_A 27 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDV---RDPDMVQNTVSELIKVAG 103 (302)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCT---TCHHHHHHHHHHHHHHTC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCC---CCHHHHHHHHHHHHHHcC
Confidence 4566666554433455566778888877654433222222211 266666666542 356666655532 3
Q ss_pred CceEEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 218 KPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 218 ~~~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
++..|+-+......+. ..+.+++.+..+.
T Consensus 104 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 134 (302)
T 1w6u_A 104 HPNIVINNAAGNFISPTERLSPNAWKTITDI 134 (302)
T ss_dssp SCSEEEECCCCCCCSCGGGCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHH
Confidence 5677775532222221 3456666665553
No 332
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=29.85 E-value=2.2e+02 Score=24.59 Aligned_cols=99 Identities=14% Similarity=0.039 Sum_probs=50.7
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHH---HHHCCCeEEEecCCCCCCCCHHHHHHHhhc----
Q 014492 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVER---- 216 (423)
Q Consensus 144 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---- 216 (423)
+....+++|.|+...=..+...|.+.|..|++..-.-...... .+..|.++..+..|- -|.+.+++.+++
T Consensus 29 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl---~~~~~v~~~~~~~~~~ 105 (272)
T 1yb1_A 29 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDC---SNREDIYSSAKKVKAE 105 (272)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT---TCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeC---CCHHHHHHHHHHHHHH
Confidence 3345666766554433455566778888877654333222222 223466666666542 355666555532
Q ss_pred -CCceEEEEcCCCCCcCcC--CCHHHHHHHHc
Q 014492 217 -EKPKCIFLTSPNNPDGSI--INDEDLLKILE 245 (423)
Q Consensus 217 -~~~~~i~l~~p~NPtG~~--~~~~~l~~i~~ 245 (423)
.++..|+-+....+.+.. .+.+++.+..+
T Consensus 106 ~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~ 137 (272)
T 1yb1_A 106 IGDVSILVNNAGVVYTSDLFATQDPQIEKTFE 137 (272)
T ss_dssp TCCCSEEEECCCCCCCCCCGGGHHHHHHHHHH
T ss_pred CCCCcEEEECCCcCCCcchhhCCHHHHHHHHH
Confidence 367777755332223322 23455555544
No 333
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=29.85 E-value=2.7e+02 Score=23.98 Aligned_cols=96 Identities=13% Similarity=0.088 Sum_probs=52.4
Q ss_pred CcEEEeCCHHHHH-HHHHHHhcCCCCeEEEc-CCCch---hhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----
Q 014492 147 DHILVGCGADELI-DLIMRCVLDPGDKIVDC-PPTFT---MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER----- 216 (423)
Q Consensus 147 ~~i~~t~G~~~al-~~~~~~l~~~gd~Vl~~-~p~y~---~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~----- 216 (423)
..+++|.|+ .+| ..+.+.|.+.|..|++. ...-. ......+..|.++..+..|- -|.+.+++.+++
T Consensus 19 k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv---~~~~~v~~~~~~~~~~~ 94 (270)
T 3is3_A 19 KVALVTGSG-RGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADI---RQVPEIVKLFDQAVAHF 94 (270)
T ss_dssp CEEEESCTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT---TSHHHHHHHHHHHHHHH
T ss_pred CEEEEECCC-chHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCC---CCHHHHHHHHHHHHHHc
Confidence 345555555 455 44555678889887763 22222 12223344677887777543 355666655532
Q ss_pred CCceEEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 217 EKPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 217 ~~~~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
.++..++-+.-..+.+. -.+.+++++..+.
T Consensus 95 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 126 (270)
T 3is3_A 95 GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSL 126 (270)
T ss_dssp SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 36777764422223332 2467777777664
No 334
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=29.63 E-value=2.5e+02 Score=24.69 Aligned_cols=98 Identities=10% Similarity=0.033 Sum_probs=54.8
Q ss_pred CCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCch-----hhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc----
Q 014492 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT-----MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---- 216 (423)
Q Consensus 146 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~-----~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---- 216 (423)
...+++|.|+...=..+.+.|.+.|..|++..-.-. ......+..|.++..+..|- -|.+.+++.+++
T Consensus 49 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv---~d~~~v~~~~~~~~~~ 125 (294)
T 3r3s_A 49 DRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDL---SDESFARSLVHKAREA 125 (294)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCT---TSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecC---CCHHHHHHHHHHHHHH
Confidence 345666666554444555667888988876543311 12223344677888777543 355665555432
Q ss_pred -CCceEEEEcCCC-CCcC--cCCCHHHHHHHHcC
Q 014492 217 -EKPKCIFLTSPN-NPDG--SIINDEDLLKILEM 246 (423)
Q Consensus 217 -~~~~~i~l~~p~-NPtG--~~~~~~~l~~i~~~ 246 (423)
.++..++-+.-. .+.+ .-.+.+++.+..+.
T Consensus 126 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~v 159 (294)
T 3r3s_A 126 LGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAV 159 (294)
T ss_dssp HTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHH
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHH
Confidence 367777755222 2222 23577788877765
No 335
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=29.58 E-value=68 Score=25.61 Aligned_cols=55 Identities=16% Similarity=0.197 Sum_probs=38.9
Q ss_pred CCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHH-HHHHHH----cC-CC-EEEEccCCc
Q 014492 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE-DLLKIL----EM-PI-LVVLDEAYT 257 (423)
Q Consensus 203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~-~l~~i~----~~-~~-~li~Deay~ 257 (423)
...+.+.|.+.+.+.++..|++--|-|..|..-... ..+.++ +. ++ +.++||.|.
T Consensus 40 ~~~~~~~l~~li~~~~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~T 101 (150)
T 1vhx_A 40 GDYGLSRLSELIKDYTIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLT 101 (150)
T ss_dssp TBCCHHHHHHHHTTSEEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSC
T ss_pred hHHHHHHHHHHHHHcCCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCCC
Confidence 456789999999888999999999988877764322 122222 22 55 466899987
No 336
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=29.48 E-value=1.9e+02 Score=24.32 Aligned_cols=96 Identities=13% Similarity=0.066 Sum_probs=48.6
Q ss_pred cEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHH----CCCeEEEecCCCCCCCCHHHHHHHhhc-----CC
Q 014492 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV----NGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (423)
Q Consensus 148 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~----~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~ 218 (423)
.+++|.|+...=..+...|.+.|..|++..-.-.......+. .+.++..+..| --|.+.+++.+++ .+
T Consensus 4 ~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D---~~~~~~~~~~~~~~~~~~~~ 80 (250)
T 2cfc_A 4 VAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRAD---VADEGDVNAAIAATMEQFGA 80 (250)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECC---TTCHHHHHHHHHHHHHHHSC
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEec---CCCHHHHHHHHHHHHHHhCC
Confidence 456665554333445556777887777654333322222221 24456666543 2356666665542 26
Q ss_pred ceEEEEcCCCCCcCc-----CCCHHHHHHHHcC
Q 014492 219 PKCIFLTSPNNPDGS-----IINDEDLLKILEM 246 (423)
Q Consensus 219 ~~~i~l~~p~NPtG~-----~~~~~~l~~i~~~ 246 (423)
+..|+-+....+.+. -.+.+++.+..+.
T Consensus 81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ 113 (250)
T 2cfc_A 81 IDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAV 113 (250)
T ss_dssp CCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcchhhhCCHHHHHHHHHH
Confidence 777775532222221 2356666665553
No 337
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=29.33 E-value=2.7e+02 Score=23.78 Aligned_cols=98 Identities=12% Similarity=-0.022 Sum_probs=52.4
Q ss_pred CCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHH---HHHCCCeEEEecCCCCCCCCHHHHHHHhhc------
Q 014492 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVER------ 216 (423)
Q Consensus 146 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~------ 216 (423)
...+++|.|+...=..+...|.+.|..|++..-.-...... .+..|.++..+..|- -|.+.+++.+++
T Consensus 9 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~~ 85 (260)
T 2ae2_A 9 GCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDL---SSRSERQELMNTVANHFH 85 (260)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCT---TCHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCC---CCHHHHHHHHHHHHHHcC
Confidence 34567766655444455566778898877654332222221 223466777776542 356666655532
Q ss_pred CCceEEEEcCCCCCcC--cCCCHHHHHHHHcC
Q 014492 217 EKPKCIFLTSPNNPDG--SIINDEDLLKILEM 246 (423)
Q Consensus 217 ~~~~~i~l~~p~NPtG--~~~~~~~l~~i~~~ 246 (423)
.++..++-+.-..+.+ .-.+.+++.+..+.
T Consensus 86 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 117 (260)
T 2ae2_A 86 GKLNILVNNAGIVIYKEAKDYTVEDYSLIMSI 117 (260)
T ss_dssp TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 3677777542222222 13466777766654
No 338
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=29.05 E-value=2.7e+02 Score=23.82 Aligned_cols=98 Identities=12% Similarity=0.081 Sum_probs=50.6
Q ss_pred CCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHH---HC--CCeEEEecCCCCCCCCHHHHHHHhhc----
Q 014492 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA---VN--GAAVVKVPRKSDFSLNVELIADAVER---- 216 (423)
Q Consensus 146 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~---~~--g~~~~~v~~~~~~~~d~~~l~~~i~~---- 216 (423)
...+++|.|+...=..+...|.+.|..|++..-.-.......+ .. |.++..+..|- -|.+.+++.+++
T Consensus 13 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~v~~~~~~~~~~ 89 (267)
T 1iy8_A 13 DRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADV---SDEAQVEAYVTATTER 89 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCT---TSHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccC---CCHHHHHHHHHHHHHH
Confidence 3456666555433345556677888887765433222222211 11 66676666542 356666655532
Q ss_pred -CCceEEEEcCCCCCc-Cc--CCCHHHHHHHHcC
Q 014492 217 -EKPKCIFLTSPNNPD-GS--IINDEDLLKILEM 246 (423)
Q Consensus 217 -~~~~~i~l~~p~NPt-G~--~~~~~~l~~i~~~ 246 (423)
.++..++-+.-..+. +. -.+.+++.+..+.
T Consensus 90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~ 123 (267)
T 1iy8_A 90 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSI 123 (267)
T ss_dssp HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHH
T ss_pred cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHH
Confidence 367777754221111 21 2466777766654
No 339
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=29.00 E-value=1.9e+02 Score=25.81 Aligned_cols=98 Identities=10% Similarity=0.078 Sum_probs=53.1
Q ss_pred CCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCC-------c-----hhh---HHHHHHCCCeEEEecCCCCCCCCHHHH
Q 014492 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT-------F-----TMY---EFDAAVNGAAVVKVPRKSDFSLNVELI 210 (423)
Q Consensus 146 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~-------y-----~~~---~~~~~~~g~~~~~v~~~~~~~~d~~~l 210 (423)
...+++|.|+...=..+...|.+.|..|++..-. + ... ....+..|.++..+..|- -|.+.+
T Consensus 46 gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv---~d~~~v 122 (317)
T 3oec_A 46 GKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADV---RDLASL 122 (317)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCT---TCHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCC---CCHHHH
Confidence 3456666555433345556678889887764321 1 111 122234577787777543 355666
Q ss_pred HHHhhc-----CCceEEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 211 ADAVER-----EKPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 211 ~~~i~~-----~~~~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
++.+++ .++.++|-+.-....+. -.+.+++.++.+.
T Consensus 123 ~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~v 165 (317)
T 3oec_A 123 QAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQT 165 (317)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 655532 36777775532222232 3467777777664
No 340
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=28.82 E-value=1.8e+02 Score=25.04 Aligned_cols=97 Identities=12% Similarity=0.094 Sum_probs=53.9
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHH---HHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CC
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~ 218 (423)
..+++|.|+...=..+...|.+.|..|++..-.-...... .+..|.++..+..|- -|.+.+++.+++ .+
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv---~~~~~v~~~~~~~~~~~g~ 88 (264)
T 3ucx_A 12 KVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDI---TDDAQVAHLVDETMKAYGR 88 (264)
T ss_dssp CEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT---TCHHHHHHHHHHHHHHTSC
T ss_pred cEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCC---CCHHHHHHHHHHHHHHcCC
Confidence 4566666655433455566788898887765444332222 233577777777543 255666555432 36
Q ss_pred ceEEEEcCCC-CCcCc--CCCHHHHHHHHcC
Q 014492 219 PKCIFLTSPN-NPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 219 ~~~i~l~~p~-NPtG~--~~~~~~l~~i~~~ 246 (423)
+..++-+.-. .+.+. -.+.+++.+..+.
T Consensus 89 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~ 119 (264)
T 3ucx_A 89 VDVVINNAFRVPSMKPFANTTFEHMRDAIEL 119 (264)
T ss_dssp CSEEEECCCSCCCCCCGGGCCHHHHHHHHHH
T ss_pred CcEEEECCCCCCCCCCchhCCHHHHHHHHHH
Confidence 7777754312 22222 3466777777664
No 341
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=28.80 E-value=2.8e+02 Score=23.77 Aligned_cols=96 Identities=9% Similarity=-0.009 Sum_probs=51.8
Q ss_pred cEEEeCCHHHHHHHHHHHhcCCCCeEEEc-CCCchhhHH---HHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CC
Q 014492 148 HILVGCGADELIDLIMRCVLDPGDKIVDC-PPTFTMYEF---DAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (423)
Q Consensus 148 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~-~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~ 218 (423)
.+++|.|+...=..+.+.|.+.|..|++. ...-..... ..+..|.++..+..|- -|.+.+++.+++ .+
T Consensus 6 ~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv---~~~~~v~~~~~~~~~~~g~ 82 (258)
T 3oid_A 6 CALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANV---GQPAKIKEMFQQIDETFGR 82 (258)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCT---TCHHHHHHHHHHHHHHHSC
T ss_pred EEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCC---CCHHHHHHHHHHHHHHcCC
Confidence 45555554433344555678889887764 433332222 2233577777777543 356666655532 36
Q ss_pred ceEEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 219 PKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 219 ~~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
+..++-+.-..+.+. -.+.+++.+..+.
T Consensus 83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~v 112 (258)
T 3oid_A 83 LDVFVNNAASGVLRPVMELEETHWDWTMNI 112 (258)
T ss_dssp CCEEEECCCCCCCSCGGGCCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 777775532222222 3567777776654
No 342
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=28.57 E-value=2.2e+02 Score=25.01 Aligned_cols=99 Identities=10% Similarity=0.082 Sum_probs=50.2
Q ss_pred CcEEEeCCHHHHHH-HHHHHhcCCCC---eEEEcCCCchhhHHHHHH-----CCCeEEEecCCCCCCCCHHHHHHHhhc-
Q 014492 147 DHILVGCGADELID-LIMRCVLDPGD---KIVDCPPTFTMYEFDAAV-----NGAAVVKVPRKSDFSLNVELIADAVER- 216 (423)
Q Consensus 147 ~~i~~t~G~~~al~-~~~~~l~~~gd---~Vl~~~p~y~~~~~~~~~-----~g~~~~~v~~~~~~~~d~~~l~~~i~~- 216 (423)
..+++|.|+. +|. .+...|.+.|. .|++..-.-.......+. .|.++..+..|-...-+++++.+.+.+
T Consensus 34 k~~lVTGas~-GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 112 (287)
T 3rku_A 34 KTVLITGASA-GIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQE 112 (287)
T ss_dssp CEEEEESTTS-HHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCGG
T ss_pred CEEEEecCCC-hHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence 4566665554 554 44455666664 676654443333332222 267777777653322234444443322
Q ss_pred -CCceEEEEcCC-CCCcCc--CCCHHHHHHHHcC
Q 014492 217 -EKPKCIFLTSP-NNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 217 -~~~~~i~l~~p-~NPtG~--~~~~~~l~~i~~~ 246 (423)
.++..++-+.- ..+.+. -.+.+++.+..+.
T Consensus 113 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~v 146 (287)
T 3rku_A 113 FKDIDILVNNAGKALGSDRVGQIATEDIQDVFDT 146 (287)
T ss_dssp GCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHH
T ss_pred cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHH
Confidence 35777775422 222232 3467788877765
No 343
>2g1d_A 30S ribosomal protein S24E; complete proteome, ribosome; NMR {Thermoplasma acidophilum} SCOP: d.12.1.3
Probab=28.51 E-value=32 Score=25.42 Aligned_cols=26 Identities=19% Similarity=0.542 Sum_probs=21.5
Q ss_pred CCcchHHHHHHHHHHhCCCCCcEEEe
Q 014492 127 PDPESRRLRAALAKDSGLESDHILVG 152 (423)
Q Consensus 127 ~~~g~~~lr~~ia~~~g~~~~~i~~t 152 (423)
+.+.-.++|+.||+.++++++.|++-
T Consensus 29 ~tpsk~eirekLA~~~~~~~~~vvv~ 54 (98)
T 2g1d_A 29 RTPSREEIKELIAKHEGVDKELVIVD 54 (98)
T ss_dssp SCCCHHHHHHHHHHHHHSCSTTEECC
T ss_pred CCCCHHHHHHHHHHHHCCCCCEEEEE
Confidence 45567899999999999998888763
No 344
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=28.40 E-value=1e+02 Score=27.72 Aligned_cols=47 Identities=6% Similarity=0.134 Sum_probs=31.1
Q ss_pred CCCCCCCCHHHHHHHhh---cCCceEEEEcCCCCCcCcCCCHHHHHHHHcC
Q 014492 199 RKSDFSLNVELIADAVE---REKPKCIFLTSPNNPDGSIINDEDLLKILEM 246 (423)
Q Consensus 199 ~~~~~~~d~~~l~~~i~---~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~ 246 (423)
.++++.+|.+.+++.++ +..+..|+++. ++--+..++.+|..++++.
T Consensus 28 f~~dg~iD~~~l~~lv~~li~~Gv~gl~v~G-ttGE~~~Ls~~Er~~v~~~ 77 (304)
T 3cpr_A 28 FTESGDIDIAAGREVAAYLVDKGLDSLVLAG-TTGESPTTTAAEKLELLKA 77 (304)
T ss_dssp BCTTSCBCHHHHHHHHHHHHHTTCCEEEESS-TTTTTTTSCHHHHHHHHHH
T ss_pred CCCCCCcCHHHHHHHHHHHHHcCCCEEEECc-cccChhhCCHHHHHHHHHH
Confidence 45566888888877664 25677777652 2333466788888877763
No 345
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=28.34 E-value=2.8e+02 Score=23.64 Aligned_cols=98 Identities=12% Similarity=-0.008 Sum_probs=49.2
Q ss_pred CCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHH---HHHCCCeEEEecCCCCCCCCHHHHHHHhhc------
Q 014492 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVER------ 216 (423)
Q Consensus 146 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~------ 216 (423)
...+++|.|+...=..+...|.+.|..|++..-.-...... .+..|.++..+..|- -|.+.+++.+++
T Consensus 14 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~~ 90 (266)
T 1xq1_A 14 AKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDA---SLRPEREKLMQTVSSMFG 90 (266)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT---TSHHHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCC---CCHHHHHHHHHHHHHHhC
Confidence 34566665544333455566778888777654332222221 222465666665432 355666655532
Q ss_pred CCceEEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 217 EKPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 217 ~~~~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
.++..|+-+....+.+. -.+.+++.+..+.
T Consensus 91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 122 (266)
T 1xq1_A 91 GKLDILINNLGAIRSKPTLDYTAEDFSFHIST 122 (266)
T ss_dssp TCCSEEEEECCC------CCCCHHHHHHHHHH
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 46777776532222222 2456666665553
No 346
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=28.32 E-value=2.8e+02 Score=23.66 Aligned_cols=96 Identities=15% Similarity=-0.013 Sum_probs=50.5
Q ss_pred cEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchh-hHHHHHH----CCCeEEEecCCCCCCCCHHHHHHHhhc-----C
Q 014492 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM-YEFDAAV----NGAAVVKVPRKSDFSLNVELIADAVER-----E 217 (423)
Q Consensus 148 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~-~~~~~~~----~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~ 217 (423)
.+++|.|+...=..+...|.+.|..|++..-.-.. .....+. .|.++..+..|- -|.+.+++.+++ .
T Consensus 6 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~v~~~~~~~~~~~g 82 (260)
T 1x1t_A 6 VAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADL---SKGEAVRGLVDNAVRQMG 82 (260)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCT---TSHHHHHHHHHHHHHHHS
T ss_pred EEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCC---CCHHHHHHHHHHHHHhcC
Confidence 45565554433344555677889888765443332 2222221 166777766542 356666655542 3
Q ss_pred CceEEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 218 KPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 218 ~~~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
++..++-+.-..+.+. -.+.+++.+..+.
T Consensus 83 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 113 (260)
T 1x1t_A 83 RIDILVNNAGIQHTALIEDFPTEKWDAILAL 113 (260)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 6777775532222221 2466777766654
No 347
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=27.79 E-value=3.5e+02 Score=24.58 Aligned_cols=97 Identities=11% Similarity=0.027 Sum_probs=53.2
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCch----------hhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT----------MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER 216 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~----------~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~ 216 (423)
..+++|.|+...=..+...|.+.|..|++..-.-. ......+..|.++..+..|- -|.+.+++.+++
T Consensus 46 k~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv---~d~~~v~~~~~~ 122 (346)
T 3kvo_A 46 CTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDV---RDEQQISAAVEK 122 (346)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCT---TCHHHHHHHHHH
T ss_pred CEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccC---CCHHHHHHHHHH
Confidence 45666655543334455667888987776432221 12233345688888887543 356666655542
Q ss_pred -----CCceEEEEcCCCCCcC--cCCCHHHHHHHHcC
Q 014492 217 -----EKPKCIFLTSPNNPDG--SIINDEDLLKILEM 246 (423)
Q Consensus 217 -----~~~~~i~l~~p~NPtG--~~~~~~~l~~i~~~ 246 (423)
.++..+|-+.-....+ .-.+.+++.++.+.
T Consensus 123 ~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~v 159 (346)
T 3kvo_A 123 AIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNV 159 (346)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 3677777553222222 23466777766654
No 348
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=27.76 E-value=2.8e+02 Score=23.46 Aligned_cols=95 Identities=14% Similarity=0.104 Sum_probs=49.0
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CCceE
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKC 221 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~ 221 (423)
..+++|.|+...=..+...|.+.|..|++..-.-.......+..|+..+..+. -|.+.+++.+++ .++..
T Consensus 6 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~g~id~ 80 (245)
T 1uls_A 6 KAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDV-----ADPASVERGFAEALAHLGRLDG 80 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCT-----TCHHHHHHHHHHHHHHHSSCCE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecC-----CCHHHHHHHHHHHHHHcCCCCE
Confidence 35666655543334455567788988876543333333333334644444332 255666655532 35777
Q ss_pred EEEcCCCCCcC--cCCCHHHHHHHHcC
Q 014492 222 IFLTSPNNPDG--SIINDEDLLKILEM 246 (423)
Q Consensus 222 i~l~~p~NPtG--~~~~~~~l~~i~~~ 246 (423)
++-+.-..+.+ .-.+.+++++..+.
T Consensus 81 lvn~Ag~~~~~~~~~~~~~~~~~~~~~ 107 (245)
T 1uls_A 81 VVHYAGITRDNFHWKMPLEDWELVLRV 107 (245)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 77542222222 22456677666654
No 349
>3re1_A Uroporphyrinogen-III synthetase; HEMD-like family, uroporphyrinogen III synthase, HMB, lyase; 2.50A {Pseudomonas syringae PV}
Probab=27.73 E-value=38 Score=29.94 Aligned_cols=60 Identities=8% Similarity=-0.053 Sum_probs=38.9
Q ss_pred CCCeEEEcCCCch--hhHHHHHHCCCeEEEecCC-CCCCCCHHHHHHHhhc-CCceEEEEcCCC
Q 014492 169 PGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVER-EKPKCIFLTSPN 228 (423)
Q Consensus 169 ~gd~Vl~~~p~y~--~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~-~~~~~i~l~~p~ 228 (423)
.|.+|++..|.-. .+...++..|++++.+|.- .....|.+.+.+.+.+ .+...|+++++|
T Consensus 13 ~g~~IlvTRp~~~a~~l~~~L~~~G~~~~~~P~i~i~~~~~~~~l~~~l~~l~~~d~vifTS~n 76 (269)
T 3re1_A 13 SAWRLLLTRPAEESAALARVLADAGIFSSSLPLLETEPLPLTPAQRSIIFELLNYSAVIVVSKP 76 (269)
T ss_dssp CCCEEEECSCHHHHHHHHHHHHTTTCEEEECCCCEEEECCCHHHHHHHHHTGGGSSEEEECSHH
T ss_pred CCCEEEEeCChHHHHHHHHHHHHCCCCEEEcCCEEEecCCCcHHHHHHHHhccCCCEEEEECHH
Confidence 3678999888764 5556667789999999842 1112234555555432 356788888776
No 350
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=27.65 E-value=2.5e+02 Score=23.98 Aligned_cols=96 Identities=14% Similarity=0.021 Sum_probs=49.3
Q ss_pred cEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchh--hHHH---HHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----C
Q 014492 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM--YEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVER-----E 217 (423)
Q Consensus 148 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~--~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~ 217 (423)
.+++|.|+...=..+...|.+.|..|++..-.-.. .... .+..|.++..+..|- -|.+.+++.+++ .
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv---~~~~~v~~~~~~~~~~~g 80 (258)
T 3a28_C 4 VAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDV---TDKANFDSAIDEAAEKLG 80 (258)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCT---TCHHHHHHHHHHHHHHHT
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccC---CCHHHHHHHHHHHHHHhC
Confidence 45565554433344555577778777765432222 2222 222366677766542 355666555532 3
Q ss_pred CceEEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 218 KPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 218 ~~~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
++..++-+....+.+. -.+.+++.+..+.
T Consensus 81 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 111 (258)
T 3a28_C 81 GFDVLVNNAGIAQIKPLLEVTEEDLKQIYSV 111 (258)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHh
Confidence 6777775532222222 2466777776664
No 351
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=27.58 E-value=3e+02 Score=23.84 Aligned_cols=97 Identities=9% Similarity=0.057 Sum_probs=51.6
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHH---HHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CC
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~ 218 (423)
..+++|.|+...=..+...|.+.|..|++..-.-...... .+..|.++..+..|- -|.+.+++.+++ .+
T Consensus 45 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl---~d~~~v~~~~~~~~~~~~~ 121 (285)
T 2c07_A 45 KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDV---SKKEEISEVINKILTEHKN 121 (285)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCT---TCHHHHHHHHHHHHHHCSC
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCC---CCHHHHHHHHHHHHHhcCC
Confidence 4566665554433455566788888877643222222222 222466777666542 356666665532 36
Q ss_pred ceEEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 219 PKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 219 ~~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
+..||-+.-..+.+. -.+.+++.+..+.
T Consensus 122 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 151 (285)
T 2c07_A 122 VDILVNNAGITRDNLFLRMKNDEWEDVLRT 151 (285)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCchhhCCHHHHHHHHHH
Confidence 777775532222222 2466677666654
No 352
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=27.25 E-value=1.6e+02 Score=26.66 Aligned_cols=89 Identities=9% Similarity=0.008 Sum_probs=41.1
Q ss_pred EEeCCHHHHHHHHHHHhc-CCCCe-EEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCC
Q 014492 150 LVGCGADELIDLIMRCVL-DPGDK-IVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSP 227 (423)
Q Consensus 150 ~~t~G~~~al~~~~~~l~-~~gd~-Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p 227 (423)
+++.|...... .+.++. .++-+ +.+.++.-......++.+|+.-.. -|++++ +..+++.+|+++.|
T Consensus 28 iIG~G~ig~~~-~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y--------~d~~el---l~~~~iDaV~I~tP 95 (350)
T 4had_A 28 IISTAKIGRDN-VVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAF--------GSYEEM---LASDVIDAVYIPLP 95 (350)
T ss_dssp EESCCHHHHHT-HHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEE--------SSHHHH---HHCSSCSEEEECSC
T ss_pred EEcChHHHHHH-HHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeee--------CCHHHH---hcCCCCCEEEEeCC
Confidence 56677543222 222221 23423 335566555455555556643211 133333 33456777777766
Q ss_pred CCCcCcCCCHHHHHHHHcCCCEEEEccC
Q 014492 228 NNPDGSIINDEDLLKILEMPILVVLDEA 255 (423)
Q Consensus 228 ~NPtG~~~~~~~l~~i~~~~~~li~Dea 255 (423)
++- -.+-..+.++.|..|++.=.
T Consensus 96 ~~~-----H~~~~~~al~aGkhVl~EKP 118 (350)
T 4had_A 96 TSQ-----HIEWSIKAADAGKHVVCEKP 118 (350)
T ss_dssp GGG-----HHHHHHHHHHTTCEEEECSC
T ss_pred Cch-----hHHHHHHHHhcCCEEEEeCC
Confidence 542 12333334444555555543
No 353
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=26.74 E-value=3e+02 Score=23.51 Aligned_cols=98 Identities=8% Similarity=0.060 Sum_probs=52.5
Q ss_pred CCcEEEeCCHHHHHHHHHHHhcCCCCeEEEc-CCCchhhHH---HHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----
Q 014492 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDC-PPTFTMYEF---DAAVNGAAVVKVPRKSDFSLNVELIADAVER----- 216 (423)
Q Consensus 146 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~-~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~----- 216 (423)
...+++|.|+...=..+...|.+.|..|++. ...-..... ..+..|.++..+..|- -|.+.+++.+++
T Consensus 8 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv---~~~~~v~~~~~~~~~~~ 84 (259)
T 3edm_A 8 NRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADL---TNAAEVEAAISAAADKF 84 (259)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCT---TCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCC---CCHHHHHHHHHHHHHHh
Confidence 3456666655543345556678889888765 433332222 2233566666666542 355666655532
Q ss_pred CCceEEEEcCCCC-CcCc--CCCHHHHHHHHcC
Q 014492 217 EKPKCIFLTSPNN-PDGS--IINDEDLLKILEM 246 (423)
Q Consensus 217 ~~~~~i~l~~p~N-PtG~--~~~~~~l~~i~~~ 246 (423)
.++..++-+.-.. +.+. -.+.+++.+..+.
T Consensus 85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~v 117 (259)
T 3edm_A 85 GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDV 117 (259)
T ss_dssp CSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred CCCCEEEECCCccCCCCChhhCCHHHHHHHHHH
Confidence 3566666442221 2232 3567777777664
No 354
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=26.41 E-value=2.4e+02 Score=24.45 Aligned_cols=98 Identities=16% Similarity=0.087 Sum_probs=51.1
Q ss_pred CCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHH---HHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----C
Q 014492 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVER-----E 217 (423)
Q Consensus 146 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~ 217 (423)
...+++|.|+...=..+...|.+.|..|++..-.-...... .+..|.++..+..|- -|.+.+++.+++ .
T Consensus 22 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv---~~~~~v~~~~~~~~~~~g 98 (277)
T 2rhc_B 22 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDV---RSVPEIEALVAAVVERYG 98 (277)
T ss_dssp SCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT---TCHHHHHHHHHHHHHHTC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCC---CCHHHHHHHHHHHHHHhC
Confidence 34566666554333455556778888777654332222221 222466676666542 356666555532 3
Q ss_pred CceEEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 218 KPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 218 ~~~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
++..++-+.-..+.+. -.+.+++.+..+.
T Consensus 99 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 129 (277)
T 2rhc_B 99 PVDVLVNNAGRPGGGATAELADELWLDVVET 129 (277)
T ss_dssp SCSEEEECCCCCCCSCGGGCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 5777775532222222 2466677666654
No 355
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=26.39 E-value=1.8e+02 Score=24.92 Aligned_cols=99 Identities=13% Similarity=0.071 Sum_probs=52.6
Q ss_pred CCCcEEEeCCH-HHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHH----CCCeEEEecCCCCCCCCHHHHHHHhhc---
Q 014492 145 ESDHILVGCGA-DELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV----NGAAVVKVPRKSDFSLNVELIADAVER--- 216 (423)
Q Consensus 145 ~~~~i~~t~G~-~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~----~g~~~~~v~~~~~~~~d~~~l~~~i~~--- 216 (423)
+...+++|.|+ ...=..+.+.|.+.|..|++..-.-.......+. .+.++..+..|- -|.+.+++.+++
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl---~~~~~v~~~~~~~~~ 97 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDV---TSTEAVDALITQTVE 97 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCT---TCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCC---CCHHHHHHHHHHHHH
Confidence 34567777664 3222344455778898887665443332222221 235666666543 255666555432
Q ss_pred --CCceEEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 217 --EKPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 217 --~~~~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
.++..++-+.-..+.+. -.+.+++++..+.
T Consensus 98 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 131 (266)
T 3o38_A 98 KAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNV 131 (266)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHH
Confidence 36777776533222232 3467777776664
No 356
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=26.34 E-value=3e+02 Score=23.37 Aligned_cols=99 Identities=11% Similarity=-0.038 Sum_probs=49.0
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHH----HCCCeEEEecCCCCCCCCHHHHHHHhhc-----C
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA----VNGAAVVKVPRKSDFSLNVELIADAVER-----E 217 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~ 217 (423)
..+++|.|+...=..+.+.|.+.|..|++..-.-.......+ ..+.++..+..|-. .-|.+.+++.+++ .
T Consensus 13 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~~~g 91 (252)
T 3f1l_A 13 RIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLL-TCTSENCQQLAQRIAVNYP 91 (252)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTT-TCCHHHHHHHHHHHHHHCS
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecc-cCCHHHHHHHHHHHHHhCC
Confidence 356666555433344555678889888776544332222221 12224444443221 1345555554432 3
Q ss_pred CceEEEEcCC-CCCcC--cCCCHHHHHHHHcC
Q 014492 218 KPKCIFLTSP-NNPDG--SIINDEDLLKILEM 246 (423)
Q Consensus 218 ~~~~i~l~~p-~NPtG--~~~~~~~l~~i~~~ 246 (423)
++..++-+.- ..+.+ .-.+.+++.+..+.
T Consensus 92 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~ 123 (252)
T 3f1l_A 92 RLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQV 123 (252)
T ss_dssp CCSEEEECCCCCCCCSCTTTCCHHHHHHHHHH
T ss_pred CCCEEEECCccCCCCCCcccCCHHHHHHHHhh
Confidence 6777775522 12222 23567777777664
No 357
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=26.16 E-value=1e+02 Score=27.71 Aligned_cols=47 Identities=9% Similarity=0.165 Sum_probs=31.8
Q ss_pred CCCCCCCCHHHHHHHhh---cCCceEEEEcCCCCCcCcCCCHHHHHHHHcC
Q 014492 199 RKSDFSLNVELIADAVE---REKPKCIFLTSPNNPDGSIINDEDLLKILEM 246 (423)
Q Consensus 199 ~~~~~~~d~~~l~~~i~---~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~ 246 (423)
.++++.+|.+.+++.++ +..+..|+++. ++--+..++.+|..++++.
T Consensus 23 F~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~G-tTGE~~~Ls~eEr~~v~~~ 72 (303)
T 2wkj_A 23 FDQQQALDKASLRRLVQFNIQQGIDGLYVGG-STGEAFVQSLSEREQVLEI 72 (303)
T ss_dssp BCTTSSBCHHHHHHHHHHHHHTTCSEEEESS-TTTTGGGSCHHHHHHHHHH
T ss_pred CCCCCCcCHHHHHHHHHHHHHcCCCEEEECe-eccChhhCCHHHHHHHHHH
Confidence 45567889888887664 35777887652 2333466888888887763
No 358
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=26.09 E-value=3.2e+02 Score=23.61 Aligned_cols=101 Identities=11% Similarity=0.083 Sum_probs=55.9
Q ss_pred CCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEc-CCCchh---hHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc--
Q 014492 143 GLESDHILVGCGADELIDLIMRCVLDPGDKIVDC-PPTFTM---YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-- 216 (423)
Q Consensus 143 g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~-~p~y~~---~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-- 216 (423)
.++...+++|.|+...=..+.+.|.+.|..|++. ...-.. .....+..|.++..+..|- -|.+.+++.+++
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv---~d~~~v~~~~~~~~ 104 (271)
T 3v2g_A 28 SLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADN---RDAEAIEQAIRETV 104 (271)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT---TCHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCC---CCHHHHHHHHHHHH
Confidence 4444566676666544345566678889887764 322221 2222334577887777543 356666655532
Q ss_pred ---CCceEEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 217 ---EKPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 217 ---~~~~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
.++..++-+--....+. -.+.+++.+..+.
T Consensus 105 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~v 139 (271)
T 3v2g_A 105 EALGGLDILVNSAGIWHSAPLEETTVADFDEVMAV 139 (271)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 36777775532222222 3467777777664
No 359
>4es6_A Uroporphyrinogen-III synthase; heme-biosynthesis, cytoplasmi; 2.22A {Pseudomonas aeruginosa}
Probab=25.81 E-value=36 Score=29.71 Aligned_cols=60 Identities=10% Similarity=0.033 Sum_probs=38.5
Q ss_pred CCeEEEcCCCch--hhHHHHHHCCCeEEEecCCC-CCCCCHHHHHHHhhc-CCceEEEEcCCCC
Q 014492 170 GDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVER-EKPKCIFLTSPNN 229 (423)
Q Consensus 170 gd~Vl~~~p~y~--~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~-~~~~~i~l~~p~N 229 (423)
|.+|++..|.-. .+...++..|++++.+|.-. ....|.+.+.+.+.+ .+...|+++++|-
T Consensus 6 g~~vlvtRp~~~~~~l~~~L~~~G~~~~~~P~i~i~~~~~~~~l~~~l~~l~~~d~vifTS~~a 69 (254)
T 4es6_A 6 GWRLLLTRPDEECAALAASLGEAGVHSSSLPLLAIDPLEETPEQRTLMLDLDRYCAVVVVSKPA 69 (254)
T ss_dssp CCEEEECSCHHHHHHHHHHHHHTTCEEEECCSCEEEECCCCHHHHHHHHTGGGCSEEEECSHHH
T ss_pred CCEEEEeCChHHhHHHHHHHHHCCCcEEEeCCEEEeeCcChHHHHHHHHhccCCCEEEEECHHH
Confidence 778999998653 56666778999999999311 111223455544432 3567888887763
No 360
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=25.51 E-value=3.3e+02 Score=23.52 Aligned_cols=98 Identities=8% Similarity=0.029 Sum_probs=53.6
Q ss_pred CCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCC------------ch---hhHHHHHHCCCeEEEecCCCCCCCCHHHH
Q 014492 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT------------FT---MYEFDAAVNGAAVVKVPRKSDFSLNVELI 210 (423)
Q Consensus 146 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~------------y~---~~~~~~~~~g~~~~~v~~~~~~~~d~~~l 210 (423)
...+++|.|+...=..+.+.|.+.|..|++..-. -. ......+..|.++..+..|- -|.+.+
T Consensus 10 ~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv---~~~~~v 86 (281)
T 3s55_A 10 GKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDV---KDRAAL 86 (281)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCT---TCHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCC---CCHHHH
Confidence 3456666655433345566678889887764432 11 11122334577777777543 355666
Q ss_pred HHHhhc-----CCceEEEEcCCCCCcC--cCCCHHHHHHHHcC
Q 014492 211 ADAVER-----EKPKCIFLTSPNNPDG--SIINDEDLLKILEM 246 (423)
Q Consensus 211 ~~~i~~-----~~~~~i~l~~p~NPtG--~~~~~~~l~~i~~~ 246 (423)
++.+++ .++..++-+.-..+.+ .-.+.+++.+..+.
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 129 (281)
T 3s55_A 87 ESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGT 129 (281)
T ss_dssp HHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 555532 3677777553222223 23567777777664
No 361
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=25.47 E-value=1.9e+02 Score=26.07 Aligned_cols=88 Identities=8% Similarity=0.027 Sum_probs=51.4
Q ss_pred EEEeCCHHHHHHHHHHHhcCC---CCeE--EEcCCCchhhHHHHHHCCCeEEEecCCCCCCCC-HHHHHHHhhcCCceEE
Q 014492 149 ILVGCGADELIDLIMRCVLDP---GDKI--VDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLN-VELIADAVEREKPKCI 222 (423)
Q Consensus 149 i~~t~G~~~al~~~~~~l~~~---gd~V--l~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d-~~~l~~~i~~~~~~~i 222 (423)
+++.+|.-..+..++...... .+.+ +...|. ....++.+|+.+..+|........ -+++.+.+++.++.++
T Consensus 109 ~vl~Sg~g~nl~~ll~~~~~g~l~~~I~~Visn~~~---~~~~A~~~gIp~~~~~~~~~~r~~~~~~~~~~l~~~~~Dli 185 (302)
T 3o1l_A 109 VLMASRESHCLADLLHRWHSDELDCDIACVISNHQD---LRSMVEWHDIPYYHVPVDPKDKEPAFAEVSRLVGHHQADVV 185 (302)
T ss_dssp EEEECSCCHHHHHHHHHHHTTCSCSEEEEEEESSST---THHHHHTTTCCEEECCCCSSCCHHHHHHHHHHHHHTTCSEE
T ss_pred EEEEeCCchhHHHHHHHHHCCCCCcEEEEEEECcHH---HHHHHHHcCCCEEEcCCCcCCHHHHHHHHHHHHHHhCCCEE
Confidence 345566556777777654322 2322 222333 335678899999888743211111 2356667766789999
Q ss_pred EEcCCCCCcCcCCCHHHHHHH
Q 014492 223 FLTSPNNPDGSIINDEDLLKI 243 (423)
Q Consensus 223 ~l~~p~NPtG~~~~~~~l~~i 243 (423)
++.. .+.+++.+-+...
T Consensus 186 Vlag----ym~IL~~~~l~~~ 202 (302)
T 3o1l_A 186 VLAR----YMQILPPQLCREY 202 (302)
T ss_dssp EESS----CCSCCCTTHHHHT
T ss_pred EHhH----hhhhcCHHHHhhh
Confidence 9864 4667777666544
No 362
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=25.47 E-value=2.9e+02 Score=23.86 Aligned_cols=97 Identities=10% Similarity=0.023 Sum_probs=51.5
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHH---HHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CC
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF---DAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~ 218 (423)
..+++|.|+...=..+...|.+.|..|++..-.-..... ..+..|.++..+..| --|.+.+++.+++ .+
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D---v~d~~~v~~~~~~~~~~~g~ 105 (270)
T 3ftp_A 29 QVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLN---VNDATAVDALVESTLKEFGA 105 (270)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECC---TTCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEe---CCCHHHHHHHHHHHHHHcCC
Confidence 455555554433344555678889888766544332222 223345566555543 2355666555532 36
Q ss_pred ceEEEEcCCCCCcC--cCCCHHHHHHHHcC
Q 014492 219 PKCIFLTSPNNPDG--SIINDEDLLKILEM 246 (423)
Q Consensus 219 ~~~i~l~~p~NPtG--~~~~~~~l~~i~~~ 246 (423)
+..++-+.-....+ .-.+.+++.+..+.
T Consensus 106 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~v 135 (270)
T 3ftp_A 106 LNVLVNNAGITQDQLAMRMKDDEWDAVIDT 135 (270)
T ss_dssp CCEEEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 77777553222222 23567777777664
No 363
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=25.45 E-value=2.3e+02 Score=24.03 Aligned_cols=96 Identities=14% Similarity=0.086 Sum_probs=49.7
Q ss_pred CcEEEeCCHHHHH-HHHHHHhcCCCCeEEEcC-CCch---hhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----
Q 014492 147 DHILVGCGADELI-DLIMRCVLDPGDKIVDCP-PTFT---MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER----- 216 (423)
Q Consensus 147 ~~i~~t~G~~~al-~~~~~~l~~~gd~Vl~~~-p~y~---~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~----- 216 (423)
..+++|.|+ .++ ..+...|.+.|..|++.. ..-. ......+..+.++..+..| --|.+.+++.+++
T Consensus 14 k~vlITGas-~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D---v~~~~~v~~~~~~~~~~~ 89 (256)
T 3ezl_A 14 RIAYVTGGM-GGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGN---VGDWDSTKQAFDKVKAEV 89 (256)
T ss_dssp EEEEETTTT-SHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECC---TTCHHHHHHHHHHHHHHT
T ss_pred CEEEEECCC-ChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecC---CCCHHHHHHHHHHHHHhc
Confidence 355555554 455 445556778887776532 2222 2223334456666666643 2355665555432
Q ss_pred CCceEEEEcCCCCCcC--cCCCHHHHHHHHcC
Q 014492 217 EKPKCIFLTSPNNPDG--SIINDEDLLKILEM 246 (423)
Q Consensus 217 ~~~~~i~l~~p~NPtG--~~~~~~~l~~i~~~ 246 (423)
.++..++-+.-....+ .-.+.+++.+..+.
T Consensus 90 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~v 121 (256)
T 3ezl_A 90 GEIDVLVNNAGITRDVVFRKMTREDWQAVIDT 121 (256)
T ss_dssp CCEEEEEECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHHH
Confidence 2567766552222222 23466777776654
No 364
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=25.29 E-value=2.7e+02 Score=23.67 Aligned_cols=94 Identities=12% Similarity=0.047 Sum_probs=49.0
Q ss_pred EEEeCCHHHHH-HHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CCceEE
Q 014492 149 ILVGCGADELI-DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKCI 222 (423)
Q Consensus 149 i~~t~G~~~al-~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~i 222 (423)
+++|.| +.++ ..+...|.+.|..|++..-.-.......+..+.++..++.| --|.+.+++.+++ .++..+
T Consensus 3 vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D---v~~~~~v~~~~~~~~~~~g~iD~l 78 (248)
T 3asu_A 3 VLVTGA-TAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLD---VRNRAAIEEMLASLPAEWCNIDIL 78 (248)
T ss_dssp EEETTT-TSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECC---TTCHHHHHHHHHTSCTTTCCCCEE
T ss_pred EEEECC-CChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcC---CCCHHHHHHHHHHHHHhCCCCCEE
Confidence 455544 4444 34455577788887765433333333333334456666543 2356777766642 256766
Q ss_pred EEcCCCC-CcC--cCCCHHHHHHHHcC
Q 014492 223 FLTSPNN-PDG--SIINDEDLLKILEM 246 (423)
Q Consensus 223 ~l~~p~N-PtG--~~~~~~~l~~i~~~ 246 (423)
+-+.-.. +.+ .-.+.+++.+..+.
T Consensus 79 vnnAg~~~~~~~~~~~~~~~~~~~~~~ 105 (248)
T 3asu_A 79 VNNAGLALGMEPAHKASVEDWETMIDT 105 (248)
T ss_dssp EECCCCCCCCSCGGGSCHHHHHHHHHH
T ss_pred EECCCcCCCCCchhhCCHHHHHHHHHH
Confidence 6442211 112 23466777776664
No 365
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=25.20 E-value=3.1e+02 Score=23.12 Aligned_cols=97 Identities=12% Similarity=0.093 Sum_probs=50.3
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCC-CchhhHH---HHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----C
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPP-TFTMYEF---DAAVNGAAVVKVPRKSDFSLNVELIADAVER-----E 217 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p-~y~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~ 217 (423)
..+++|.|+...=..+...|.+.|..|++..- .-..... ..+..|.++..+..|- -|.+.+++.+++ .
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~g 81 (246)
T 2uvd_A 5 KVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADV---ANAEDVTNMVKQTVDVFG 81 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT---TCHHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCC---CCHHHHHHHHHHHHHHcC
Confidence 34556554443334455567788888776432 2222222 2223466676666542 356666665542 3
Q ss_pred CceEEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 218 KPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 218 ~~~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
++..++-+.-..+.+. -.+.+++++..+.
T Consensus 82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 112 (246)
T 2uvd_A 82 QVDILVNNAGVTKDNLLMRMKEEEWDTVINT 112 (246)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 6777775532222222 2466777766654
No 366
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=25.16 E-value=3.1e+02 Score=23.17 Aligned_cols=85 Identities=14% Similarity=0.130 Sum_probs=53.3
Q ss_pred EEeCCHHHHHHHHHHHhcCCC---CeE--EEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEE
Q 014492 150 LVGCGADELIDLIMRCVLDPG---DKI--VDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFL 224 (423)
Q Consensus 150 ~~t~G~~~al~~~~~~l~~~g---d~V--l~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l 224 (423)
++.+|.-..+..++..+...+ +.+ +...|.-.. ...|+.+|+.+..++.. .+.-+++.+.+++.++.++++
T Consensus 13 vl~SG~gsnl~all~~~~~~~~~~~I~~Vis~~~~a~~-l~~A~~~gIp~~~~~~~---~~~~~~~~~~L~~~~~Dlivl 88 (215)
T 3kcq_A 13 VLISGRGSNLEALAKAFSTEESSVVISCVISNNAEARG-LLIAQSYGIPTFVVKRK---PLDIEHISTVLREHDVDLVCL 88 (215)
T ss_dssp EEESSCCHHHHHHHHHTCCC-CSEEEEEEEESCTTCTH-HHHHHHTTCCEEECCBT---TBCHHHHHHHHHHTTCSEEEE
T ss_pred EEEECCcHHHHHHHHHHHcCCCCcEEEEEEeCCcchHH-HHHHHHcCCCEEEeCcc---cCChHHHHHHHHHhCCCEEEE
Confidence 456666667777887665432 222 232343222 35677899998887632 223367777787788999998
Q ss_pred cCCCCCcCcCCCHHHHHH
Q 014492 225 TSPNNPDGSIINDEDLLK 242 (423)
Q Consensus 225 ~~p~NPtG~~~~~~~l~~ 242 (423)
.. .|.+++.+-+..
T Consensus 89 ag----y~~IL~~~~l~~ 102 (215)
T 3kcq_A 89 AG----FMSILPEKFVTD 102 (215)
T ss_dssp SS----CCSCCCHHHHHH
T ss_pred eC----CceEeCHHHHhh
Confidence 64 467888876654
No 367
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=25.06 E-value=1.9e+02 Score=25.14 Aligned_cols=98 Identities=9% Similarity=0.012 Sum_probs=53.1
Q ss_pred CCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCC-------------chh---hHHHHHHCCCeEEEecCCCCCCCCHHH
Q 014492 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT-------------FTM---YEFDAAVNGAAVVKVPRKSDFSLNVEL 209 (423)
Q Consensus 146 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~-------------y~~---~~~~~~~~g~~~~~v~~~~~~~~d~~~ 209 (423)
...+++|.|+...=..+.+.|.+.|..|++..-. -.. .....+..|.++..+..|- -|.+.
T Consensus 15 gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv---~~~~~ 91 (280)
T 3pgx_A 15 GRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDV---RDDAA 91 (280)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCT---TCHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCC---CCHHH
Confidence 3456666655543345556678889888765321 111 1222334577777776542 35666
Q ss_pred HHHHhhc-----CCceEEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 210 IADAVER-----EKPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 210 l~~~i~~-----~~~~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
+++.+++ .++..++-+.-....+. -.+.+++++..+.
T Consensus 92 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 135 (280)
T 3pgx_A 92 LRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGV 135 (280)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhh
Confidence 6655532 36777775532222232 2467777777664
No 368
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=25.02 E-value=3e+02 Score=24.70 Aligned_cols=96 Identities=9% Similarity=0.095 Sum_probs=50.5
Q ss_pred cEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCC-----chh---hHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc---
Q 014492 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPT-----FTM---YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER--- 216 (423)
Q Consensus 148 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~-----y~~---~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~--- 216 (423)
.+++|.|+...=..+.+.|.+.|..|++..-. -.. .....+..|.++..+..|- -|.+.+++.+++
T Consensus 7 ~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dv---td~~~v~~~~~~~~~ 83 (324)
T 3u9l_A 7 IILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDV---QSQVSVDRAIDQIIG 83 (324)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCT---TCHHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeec---CCHHHHHHHHHHHHH
Confidence 45555555433345556678889888753211 111 1122233466777776542 356666655542
Q ss_pred --CCceEEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 217 --EKPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 217 --~~~~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
.++..++-+--....|. -.+.+++.++.+.
T Consensus 84 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~v 117 (324)
T 3u9l_A 84 EDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDI 117 (324)
T ss_dssp HHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHH
T ss_pred HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHH
Confidence 36777775432222332 3466777766654
No 369
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=24.88 E-value=2.9e+02 Score=23.83 Aligned_cols=96 Identities=13% Similarity=0.094 Sum_probs=50.5
Q ss_pred cEEEeCCHHHHHHHHHHHhcCCCCeEEEc---CC-----------CchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHH
Q 014492 148 HILVGCGADELIDLIMRCVLDPGDKIVDC---PP-----------TFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADA 213 (423)
Q Consensus 148 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~---~p-----------~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~ 213 (423)
-+++.+|+......+.. +.+.|..|... -| ........++..|+..+.++......--.+++.+.
T Consensus 7 vvvl~SGGkDSs~al~~-l~~~G~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGIpl~~v~~~g~~~~e~e~l~~~ 85 (237)
T 3rjz_A 7 VAVLYSGGKDSNYALYW-AIKNRFSVKFLVTMVSENEESYMYHTINANLTDLQARALGIPLVKGFTQGEKEKEVEDLKRV 85 (237)
T ss_dssp EEEECCSSHHHHHHHHH-HHHTTCEEEEEEEEECC--------CCSSSHHHHHHHHHTCCEEEEEC------CHHHHHHH
T ss_pred EEEEecCcHHHHHHHHH-HHHcCCeEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCCCEEEEECCCCchHHHHHHHHH
Confidence 45566666655545544 34556555321 11 11234566777899888877543222236777777
Q ss_pred hhcCCceEEEEcCCCCCcCcCCCH---HHHHHHHcC-CCEEE
Q 014492 214 VEREKPKCIFLTSPNNPDGSIIND---EDLLKILEM-PILVV 251 (423)
Q Consensus 214 i~~~~~~~i~l~~p~NPtG~~~~~---~~l~~i~~~-~~~li 251 (423)
+.+-.+.+++ +|.+.+. ..++.+|.. |+..+
T Consensus 86 l~~~~i~~vv-------~Gdi~s~yqr~r~e~vc~~~gl~~~ 120 (237)
T 3rjz_A 86 LSGLKIQGIV-------AGALASKYQRKRIEKVAKELGLEVY 120 (237)
T ss_dssp HTTSCCSEEE-------CC---CCSHHHHHHHHHHHTTCEEE
T ss_pred HHhcCCcEEE-------ECCcchHHHHHHHHHHHHHcCCEEE
Confidence 7654666776 5666544 345556654 66444
No 370
>2xzm_P RPS24E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_P
Probab=24.68 E-value=52 Score=26.23 Aligned_cols=26 Identities=23% Similarity=0.474 Sum_probs=21.7
Q ss_pred CCcchHHHHHHHHHHhCCCCCcEEEe
Q 014492 127 PDPESRRLRAALAKDSGLESDHILVG 152 (423)
Q Consensus 127 ~~~g~~~lr~~ia~~~g~~~~~i~~t 152 (423)
+.+.-.++++.||+.++++++.|++-
T Consensus 31 aTpSk~eIrekLAkmy~~~~d~VvV~ 56 (149)
T 2xzm_P 31 PTASKEKIREELAKQLKVDARNVVVY 56 (149)
T ss_dssp CSCCHHHHHHHHHHHHTCCGGGEEEE
T ss_pred CCCCHHHHHHHHHHHHCCCCCEEEEE
Confidence 45566799999999999999888764
No 371
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=24.15 E-value=2.7e+02 Score=24.02 Aligned_cols=126 Identities=10% Similarity=0.110 Sum_probs=66.5
Q ss_pred CcEEEeCCHHHHH-HHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-CCceEEEE
Q 014492 147 DHILVGCGADELI-DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFL 224 (423)
Q Consensus 147 ~~i~~t~G~~~al-~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~~i~l 224 (423)
..+++|.|+. +| ..+...|.+.|-.|++..-.-... ....+.++..+..|- -|.+++++.+++ .+...++-
T Consensus 12 K~alVTGas~-GIG~aia~~la~~Ga~Vv~~~~~~~~~---~~~~~~~~~~~~~Dv---~~~~~v~~~~~~~g~iDiLVN 84 (242)
T 4b79_A 12 QQVLVTGGSS-GIGAAIAMQFAELGAEVVALGLDADGV---HAPRHPRIRREELDI---TDSQRLQRLFEALPRLDVLVN 84 (242)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESSTTST---TSCCCTTEEEEECCT---TCHHHHHHHHHHCSCCSEEEE
T ss_pred CEEEEeCCCC-HHHHHHHHHHHHCCCEEEEEeCCHHHH---hhhhcCCeEEEEecC---CCHHHHHHHHHhcCCCCEEEE
Confidence 3455555554 55 444556788898887654332211 122455666666542 356777776654 35666664
Q ss_pred cCCCCCcCcCCCHHHHHHHHcCCC---EEEEccCCccccCCCchhhhh-ccCCcEEEEccChhhhcccC
Q 014492 225 TSPNNPDGSIINDEDLLKILEMPI---LVVLDEAYTEFSGLESRMEWV-KKHDNLIVLRTFSKRAGLAG 289 (423)
Q Consensus 225 ~~p~NPtG~~~~~~~l~~i~~~~~---~li~Deay~~~~~~~~~~~~~-~~~~~~i~i~S~SK~~g~~G 289 (423)
+---+....-++.++++++.+.|+ +++.- ...+.. ...+++|.+.|.+=..+.+|
T Consensus 85 NAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~----------~~~p~m~~~~G~IVnisS~~~~~~~~~ 143 (242)
T 4b79_A 85 NAGISRDREEYDLATFERVLRLNLSAAMLASQ----------LARPLLAQRGGSILNIASMYSTFGSAD 143 (242)
T ss_dssp CCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHH----------HHHHHHHHHCEEEEEECCGGGTSCCSS
T ss_pred CCCCCCCcccCCHHHHHHHHHHhhHHHHHHHH----------HHHHHHHHcCCeEEEEeeccccCCCCC
Confidence 322223334567788888777532 11111 111111 23577888888765445444
No 372
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=24.01 E-value=3.2e+02 Score=22.92 Aligned_cols=87 Identities=15% Similarity=0.095 Sum_probs=50.1
Q ss_pred EEeCCHHHHHHHHHHHhcCC--CCeE--EEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCH----HHHHHHhhcCCceE
Q 014492 150 LVGCGADELIDLIMRCVLDP--GDKI--VDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNV----ELIADAVEREKPKC 221 (423)
Q Consensus 150 ~~t~G~~~al~~~~~~l~~~--gd~V--l~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~----~~l~~~i~~~~~~~ 221 (423)
++.+|.-..+..++..+... +-.| ++.+|.=..-...|+..|+.+..++... + -+- +++.+.+.+.++.+
T Consensus 5 Vl~SG~Gs~L~aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~~-~-~~r~~~~~~~~~~l~~~~~Dl 82 (209)
T 1meo_A 5 VLISGTGSNLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINHKL-Y-KNRVEFDSAIDLVLEEFSIDI 82 (209)
T ss_dssp EEESSSCTTHHHHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHHTTCCEEECCGGG-S-SSHHHHHHHHHHHHHHTTCCE
T ss_pred EEEECCchHHHHHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHHcCCCEEEECccc-c-CchhhhhHHHHHHHHhcCCCE
Confidence 44555555677777755432 2222 3344433333456788999988776321 1 121 34556666678998
Q ss_pred EEEcCCCCCcCcCCCHHHHHH
Q 014492 222 IFLTSPNNPDGSIINDEDLLK 242 (423)
Q Consensus 222 i~l~~p~NPtG~~~~~~~l~~ 242 (423)
+++.. .|.+++.+-+..
T Consensus 83 iv~a~----y~~il~~~~l~~ 99 (209)
T 1meo_A 83 VCLAG----FMRILSGPFVQK 99 (209)
T ss_dssp EEEES----CCSCCCHHHHHH
T ss_pred EEEcc----hhhhCCHHHHhh
Confidence 88764 367788776643
No 373
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=23.77 E-value=3.2e+02 Score=22.80 Aligned_cols=97 Identities=15% Similarity=0.058 Sum_probs=49.8
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHH---H-CCCeEEEecCCCCCCCCHHHHHHHhhc-----C
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA---V-NGAAVVKVPRKSDFSLNVELIADAVER-----E 217 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~---~-~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~ 217 (423)
..+++|.|+...=..+.+.|.+.|..|++..-.-.......+ . .+.++..+..| --|.+.+++.+++ .
T Consensus 8 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D---~~~~~~~~~~~~~~~~~~~ 84 (248)
T 2pnf_A 8 KVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMN---LLSEESINKAFEEIYNLVD 84 (248)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECC---TTCHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEcc---CCCHHHHHHHHHHHHHhcC
Confidence 345666554433344555677888887765433222222211 1 36666666643 2356666665542 2
Q ss_pred CceEEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 218 KPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 218 ~~~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
++..|+-+....+.+. -.+.+++.+..+.
T Consensus 85 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~ 115 (248)
T 2pnf_A 85 GIDILVNNAGITRDKLFLRMSLLDWEEVLKV 115 (248)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHhh
Confidence 6777775532222221 2456666665553
No 374
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=23.44 E-value=2.3e+02 Score=24.43 Aligned_cols=74 Identities=9% Similarity=-0.054 Sum_probs=38.1
Q ss_pred cEEEeCCHHHHH-HHHHHHhcCCCCeEEEcCCCchhhHHHHHH------CCCeEEEecCCCCCCCCHHHHHHHhhc----
Q 014492 148 HILVGCGADELI-DLIMRCVLDPGDKIVDCPPTFTMYEFDAAV------NGAAVVKVPRKSDFSLNVELIADAVER---- 216 (423)
Q Consensus 148 ~i~~t~G~~~al-~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~------~g~~~~~v~~~~~~~~d~~~l~~~i~~---- 216 (423)
.+++|.|+ .++ ..+...|.+.|..|++..-.-.......+. .+.++..+..|- -|.+.+++.+++
T Consensus 8 ~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~ 83 (278)
T 1spx_A 8 VAIITGSS-NGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADV---TTDAGQDEILSTTLGK 83 (278)
T ss_dssp EEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCT---TSHHHHHHHHHHHHHH
T ss_pred EEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEeccc---CCHHHHHHHHHHHHHH
Confidence 45555444 455 445556778888877654332222222221 234565665432 356666655532
Q ss_pred -CCceEEEEc
Q 014492 217 -EKPKCIFLT 225 (423)
Q Consensus 217 -~~~~~i~l~ 225 (423)
.++..++-+
T Consensus 84 ~g~id~lv~~ 93 (278)
T 1spx_A 84 FGKLDILVNN 93 (278)
T ss_dssp HSCCCEEEEC
T ss_pred cCCCCEEEEC
Confidence 267777754
No 375
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=23.34 E-value=3.4e+02 Score=23.05 Aligned_cols=95 Identities=6% Similarity=0.009 Sum_probs=46.9
Q ss_pred cEEEeCCHHHHH-HHHHHHhcC---CCCeEEEcCCCchhhHHHHHH-----CCCeEEEecCCCCCCCCHHHHHHHhh---
Q 014492 148 HILVGCGADELI-DLIMRCVLD---PGDKIVDCPPTFTMYEFDAAV-----NGAAVVKVPRKSDFSLNVELIADAVE--- 215 (423)
Q Consensus 148 ~i~~t~G~~~al-~~~~~~l~~---~gd~Vl~~~p~y~~~~~~~~~-----~g~~~~~v~~~~~~~~d~~~l~~~i~--- 215 (423)
.+++|.|+ .+| ..+...|.+ .|..|++..-.-.......+. .|.++..+..|- -|.+.+++.++
T Consensus 8 ~~lVTGas-~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv---~~~~~v~~~~~~~~ 83 (259)
T 1oaa_A 8 VCVLTGAS-RGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADL---GTEAGVQRLLSAVR 83 (259)
T ss_dssp EEEESSCS-SHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCT---TSHHHHHHHHHHHH
T ss_pred EEEEeCCC-ChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCC---CCHHHHHHHHHHHH
Confidence 45555554 455 444555776 788887654333222222221 166777777543 24555555443
Q ss_pred c----CCce-EEEEcCCC--CCc-CcC---CCHHHHHHHHcC
Q 014492 216 R----EKPK-CIFLTSPN--NPD-GSI---INDEDLLKILEM 246 (423)
Q Consensus 216 ~----~~~~-~i~l~~p~--NPt-G~~---~~~~~l~~i~~~ 246 (423)
+ .+.. .++++|.. .+. +.. .+.+++.+..+.
T Consensus 84 ~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~ 125 (259)
T 1oaa_A 84 ELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWAL 125 (259)
T ss_dssp HSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHH
T ss_pred hccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHH
Confidence 1 1334 13334332 111 111 567778777664
No 376
>3u5c_Y RP50, 40S ribosomal protein S24-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_U* 3j16_D 3u5g_Y
Probab=23.28 E-value=48 Score=26.01 Aligned_cols=26 Identities=27% Similarity=0.216 Sum_probs=21.9
Q ss_pred CCcchHHHHHHHHHHhCCCCCcEEEe
Q 014492 127 PDPESRRLRAALAKDSGLESDHILVG 152 (423)
Q Consensus 127 ~~~g~~~lr~~ia~~~g~~~~~i~~t 152 (423)
+.+.-.++++.||+.++++++.|++-
T Consensus 33 aTpsr~eIrekLAk~y~~~~d~VvV~ 58 (135)
T 3u5c_Y 33 ANVSKDELREKLAEVYKAEKDAVSVF 58 (135)
T ss_dssp CCCCHHHHHHHHHTTTTSCGGGEEEE
T ss_pred CCCCHHHHHHHHHHHHCCCCCEEEEE
Confidence 45567899999999999999988764
No 377
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=23.28 E-value=2.9e+02 Score=23.78 Aligned_cols=95 Identities=15% Similarity=0.102 Sum_probs=50.8
Q ss_pred cEEEeCCHHHHH-HHHHHHhcCCCCeEEEc-CCCchhh---HHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----C
Q 014492 148 HILVGCGADELI-DLIMRCVLDPGDKIVDC-PPTFTMY---EFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----E 217 (423)
Q Consensus 148 ~i~~t~G~~~al-~~~~~~l~~~gd~Vl~~-~p~y~~~---~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~ 217 (423)
.+++|.| +.++ ..+...|.+.|..|++. ...-... ....+..+.++..+..|- -|.+.+++.+++ .
T Consensus 28 ~vlITGa-s~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl---~~~~~v~~~~~~~~~~~g 103 (272)
T 4e3z_A 28 VVLVTGG-SRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDV---GNAADIAAMFSAVDRQFG 103 (272)
T ss_dssp EEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCT---TCHHHHHHHHHHHHHHHS
T ss_pred EEEEECC-CchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCC---CCHHHHHHHHHHHHHhCC
Confidence 4555544 4455 44455677889887654 3332222 222334577888777543 355665555432 3
Q ss_pred CceEEEEcCC-CCCcCc--CCCHHHHHHHHcC
Q 014492 218 KPKCIFLTSP-NNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 218 ~~~~i~l~~p-~NPtG~--~~~~~~l~~i~~~ 246 (423)
++..++-+.- ..+.+. -.+.+++.+..+.
T Consensus 104 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~ 135 (272)
T 4e3z_A 104 RLDGLVNNAGIVDYPQRVDEMSVERIERMLRV 135 (272)
T ss_dssp CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHhh
Confidence 6777775522 221121 2367777777664
No 378
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=23.10 E-value=2.5e+02 Score=24.07 Aligned_cols=100 Identities=14% Similarity=0.132 Sum_probs=53.2
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHH---HHCC-CeEEEecCCCCCCCCHHHHHHHhhc---
Q 014492 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA---AVNG-AAVVKVPRKSDFSLNVELIADAVER--- 216 (423)
Q Consensus 144 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~g-~~~~~v~~~~~~~~d~~~l~~~i~~--- 216 (423)
++...+++|.|+...=..+...|.+.|..|++..-.-....... +..+ .++..+..|- -|.+.+++.+++
T Consensus 8 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv---~~~~~v~~~~~~~~~ 84 (262)
T 3pk0_A 8 LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDV---SDRAQCDALAGRAVE 84 (262)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCT---TSHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCC---CCHHHHHHHHHHHHH
Confidence 33445666665544334555567888988877654433322222 2233 5666666542 245665555432
Q ss_pred --CCceEEEEcCCCCCcC--cCCCHHHHHHHHcC
Q 014492 217 --EKPKCIFLTSPNNPDG--SIINDEDLLKILEM 246 (423)
Q Consensus 217 --~~~~~i~l~~p~NPtG--~~~~~~~l~~i~~~ 246 (423)
.++..++-+.-..+.+ .-.+.+++.+..+.
T Consensus 85 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 118 (262)
T 3pk0_A 85 EFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAV 118 (262)
T ss_dssp HHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 3677777553222222 23467777776664
No 379
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=23.03 E-value=1.2e+02 Score=22.16 Aligned_cols=55 Identities=20% Similarity=0.187 Sum_probs=37.4
Q ss_pred CCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHH-----HHHHHHcCCC-EEEEccCCc
Q 014492 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE-----DLLKILEMPI-LVVLDEAYT 257 (423)
Q Consensus 203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~-----~l~~i~~~~~-~li~Deay~ 257 (423)
...+++.+.+.+.+.++..|++--|-|+.|..-+.. ..++|.+.++ +.++||-+.
T Consensus 36 ~~~~~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~lpV~~~DERlT 96 (98)
T 1iv0_A 36 LEEDVEALLDFVRREGLGKLVVGLPLRTDLKESAQAGKVLPLVEALRARGVEVELWDERFT 96 (98)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEECCCCCCSSSCCCSSTTHHHHHHHHHTTCEEEEECCSCC
T ss_pred cHHHHHHHHHHHHHcCCCEEEEeeccCCCCCcCHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 345688899999878899999999988888765522 1222322244 356888764
No 380
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=22.78 E-value=2.2e+02 Score=25.57 Aligned_cols=90 Identities=20% Similarity=0.279 Sum_probs=44.1
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEE
Q 014492 145 ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFL 224 (423)
Q Consensus 145 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l 224 (423)
+.++|.+..|-.+++..+-. .. |+.+|.++.-++......++ .|+.++-++ .++++.+.+.++.-+.++.+.
T Consensus 186 kdNHi~~~G~i~~Av~~~r~-~~-p~~~ieVEvdtlde~~eAl~-aGaD~I~LD-----n~~~~~l~~av~~i~~~v~ie 257 (298)
T 3gnn_A 186 KENHIAAAGGVGEALDAAFA-LN-AEVPVQIEVETLDQLRTALA-HGARSVLLD-----NFTLDMMRDAVRVTEGRAVLE 257 (298)
T ss_dssp ---------CHHHHHHHHHH-HC---CCCEEEESSHHHHHHHHH-TTCEEEEEE-----SCCHHHHHHHHHHHTTSEEEE
T ss_pred eHHHHHHcCCHHHHHHHHHH-hC-CCCCEEEEeCCHHHHHHHHH-cCCCEEEEC-----CCCHHHHHHHHHHhCCCCeEE
Confidence 44566666666777665544 32 34456666556654444333 688877775 467788877665222233332
Q ss_pred cCCCCCcCcCCCHHHHHHHHcCCC
Q 014492 225 TSPNNPDGSIINDEDLLKILEMPI 248 (423)
Q Consensus 225 ~~p~NPtG~~~~~~~l~~i~~~~~ 248 (423)
.+ |- ++.+.+.++++.|+
T Consensus 258 aS-----GG-I~~~~i~~~a~tGV 275 (298)
T 3gnn_A 258 VS-----GG-VNFDTVRAIAETGV 275 (298)
T ss_dssp EE-----SS-CSTTTHHHHHHTTC
T ss_pred EE-----cC-CCHHHHHHHHHcCC
Confidence 21 21 24566777777654
No 381
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=22.59 E-value=1.2e+02 Score=27.22 Aligned_cols=54 Identities=11% Similarity=0.223 Sum_probs=0.0
Q ss_pred cCCCCCCCCHHHHHHHhh---c-CCceEEEEcCCCCCcCcCCCHHHHHHHHcC-------CCEEEE
Q 014492 198 PRKSDFSLNVELIADAVE---R-EKPKCIFLTSPNNPDGSIINDEDLLKILEM-------PILVVL 252 (423)
Q Consensus 198 ~~~~~~~~d~~~l~~~i~---~-~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-------~~~li~ 252 (423)
|.++++.+|.+.+++.++ + ..+..|+++ -++--+..++.+|..++++. .+.||.
T Consensus 14 Pf~~dg~iD~~~l~~lv~~li~~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 78 (293)
T 1f6k_A 14 SFNEDGTINEKGLRQIIRHNIDKMKVDGLYVG-GSTGENFMLSTEEKKEIFRIAKDEAKDQIALIA 78 (293)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHTSCCSEEEES-SGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCCCCCCcCHHHHHHHHHHHHhhCCCcEEEeC-ccccchhhCCHHHHHHHHHHHHHHhCCCCeEEE
No 382
>3mw8_A Uroporphyrinogen-III synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 1.65A {Shewanella amazonensis}
Probab=22.54 E-value=50 Score=28.43 Aligned_cols=57 Identities=12% Similarity=0.093 Sum_probs=36.6
Q ss_pred CCeEEEcCCCch--hhHHHHHHCCCeEEEecCCC-CCCCCHHHHHHHhhcCCceEEEEcCCC
Q 014492 170 GDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPN 228 (423)
Q Consensus 170 gd~Vl~~~p~y~--~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~ 228 (423)
|.+|+++.|.-. .+...++..|++++.+|.-. ....+++.+...+ .+...|+++++|
T Consensus 1 G~~vlvtRp~~~~~~l~~~L~~~G~~~~~~P~i~i~~~~~~~~~~~~l--~~~d~viftS~~ 60 (240)
T 3mw8_A 1 GMKLLLTRPEGKNAAMASALDALAIPYLVEPLLSVEAAAVTQAQLDEL--SRADILIFISTS 60 (240)
T ss_dssp CCCEEECSCTTSCHHHHHHHHHHTCCEEECCSCEEEECCCCHHHHHHH--TTCSEEEECSHH
T ss_pred CCEEEEeCChHHhHHHHHHHHHCCCcEEEeCcEEEeccccHHHHHHHh--cCCCEEEEECHH
Confidence 567899888763 56666777899999999311 1011334444444 357788888776
No 383
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=22.53 E-value=2.3e+02 Score=22.75 Aligned_cols=18 Identities=28% Similarity=0.680 Sum_probs=9.3
Q ss_pred CcEE-EeCCHHHHHHHHHH
Q 014492 147 DHIL-VGCGADELIDLIMR 164 (423)
Q Consensus 147 ~~i~-~t~G~~~al~~~~~ 164 (423)
++|+ ++.|++..+..-+.
T Consensus 40 ~~I~i~G~G~S~~~a~~~~ 58 (187)
T 3sho_A 40 DHVIVVGMGFSAAVAVFLG 58 (187)
T ss_dssp SEEEEECCGGGHHHHHHHH
T ss_pred CEEEEEecCchHHHHHHHH
Confidence 3444 56666655544443
No 384
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=22.53 E-value=3.4e+02 Score=22.69 Aligned_cols=97 Identities=11% Similarity=0.033 Sum_probs=48.2
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCC--CeEEEecCCCCCCCCHHHHHHHhhc-----CCc
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNG--AAVVKVPRKSDFSLNVELIADAVER-----EKP 219 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g--~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~ 219 (423)
..+++|.|+...=..+...|.+.|..|++..-.-.......+... .++..+..| --|.+.+++.++. .++
T Consensus 7 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D---~~~~~~~~~~~~~~~~~~~~i 83 (251)
T 1zk4_A 7 KVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHD---SSDEDGWTKLFDATEKAFGPV 83 (251)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECC---TTCHHHHHHHHHHHHHHHSSC
T ss_pred cEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECC---CCCHHHHHHHHHHHHHHhCCC
Confidence 345555554433344556677888877765433222222222221 344445433 2355666655542 357
Q ss_pred eEEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 220 KCIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 220 ~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
..|+-+....+.+. -.+.+++.+..+.
T Consensus 84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 112 (251)
T 1zk4_A 84 STLVNNAGIAVNKSVEETTTAEWRKLLAV 112 (251)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHh
Confidence 77776533222232 2466667666654
No 385
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=22.39 E-value=3.7e+02 Score=23.01 Aligned_cols=97 Identities=15% Similarity=0.065 Sum_probs=51.3
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHH---H--CCCeEEEecCCCCCCCCHHHHHHHhhc-CCce
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA---V--NGAAVVKVPRKSDFSLNVELIADAVER-EKPK 220 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~---~--~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~ 220 (423)
..+++|.|+...=..+.+.|.+.|..|++..-.-.......+ . .+..+..+..|- -|.+.+++.+++ .++.
T Consensus 11 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~---~~~~~~~~~~~~~g~id 87 (267)
T 3t4x_A 11 KTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADL---GTEQGCQDVIEKYPKVD 87 (267)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCT---TSHHHHHHHHHHCCCCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCC---CCHHHHHHHHHhcCCCC
Confidence 456666555433344555677889888776544332222221 1 145666666432 356666666653 3677
Q ss_pred EEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 221 CIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 221 ~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
.++-+.-....+. -.+.+++.+..+.
T Consensus 88 ~lv~nAg~~~~~~~~~~~~~~~~~~~~v 115 (267)
T 3t4x_A 88 ILINNLGIFEPVEYFDIPDEDWFKLFEV 115 (267)
T ss_dssp EEEECCCCCCCCCGGGSCHHHHHHHHHH
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHH
Confidence 7775522222222 3456777766654
No 386
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=22.31 E-value=3.5e+02 Score=22.76 Aligned_cols=96 Identities=6% Similarity=0.065 Sum_probs=52.2
Q ss_pred cEEEeCCHHHHHHHHHHHhcCCCCeEEEcCC-Cchh---hHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CC
Q 014492 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPP-TFTM---YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (423)
Q Consensus 148 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p-~y~~---~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~ 218 (423)
.+++|.|+...=..+...|.+.|..|++..- .-.. .....+..|.++..+..|- -|.+.+++.+++ .+
T Consensus 6 ~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv---~d~~~v~~~~~~~~~~~g~ 82 (246)
T 3osu_A 6 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANV---ADADEVKAMIKEVVSQFGS 82 (246)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCT---TCHHHHHHHHHHHHHHHSC
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccC---CCHHHHHHHHHHHHHHcCC
Confidence 4556555543334455667888988765432 2222 2222334577777777543 356666655532 36
Q ss_pred ceEEEEcCCCCCcC--cCCCHHHHHHHHcC
Q 014492 219 PKCIFLTSPNNPDG--SIINDEDLLKILEM 246 (423)
Q Consensus 219 ~~~i~l~~p~NPtG--~~~~~~~l~~i~~~ 246 (423)
+..++-+.-..+.+ .-.+.+++.+..+.
T Consensus 83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~v 112 (246)
T 3osu_A 83 LDVLVNNAGITRDNLLMRMKEQEWDDVIDT 112 (246)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 77777553222222 23467777777664
No 387
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=22.11 E-value=3.2e+02 Score=24.56 Aligned_cols=89 Identities=12% Similarity=0.201 Sum_probs=49.1
Q ss_pred cEEEeCC---HHHHHHHHHHHhcCCC-CeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEE
Q 014492 148 HILVGCG---ADELIDLIMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIF 223 (423)
Q Consensus 148 ~i~~t~G---~~~al~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~ 223 (423)
-|+.+.| +.+++.++-.+----+ |.|++..|.|...... ++ .+.+++..+..+.-+++
T Consensus 78 pViaGvg~~~t~~ai~la~~A~~~Ga~davlv~~P~y~~~s~~-----------------~l-~~~f~~va~a~~lPiil 139 (311)
T 3h5d_A 78 PLIAGVGTNDTRDSIEFVKEVAEFGGFAAGLAIVPYYNKPSQE-----------------GM-YQHFKAIADASDLPIII 139 (311)
T ss_dssp CEEEECCCSSHHHHHHHHHHHHHSCCCSEEEEECCCSSCCCHH-----------------HH-HHHHHHHHHSCSSCEEE
T ss_pred cEEEeCCCcCHHHHHHHHHHHHhcCCCcEEEEcCCCCCCCCHH-----------------HH-HHHHHHHHHhCCCCEEE
Confidence 4666554 5555555544322234 8899999988521100 00 11122222212334444
Q ss_pred EcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccC
Q 014492 224 LTSPNNPDGSIINDEDLLKILEM-PILVVLDEA 255 (423)
Q Consensus 224 l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Dea 255 (423)
-+.|.. ||..++.+.+.+|++. ++.=|=|..
T Consensus 140 Yn~P~~-tg~~l~~~~~~~La~~pnIvgiKdss 171 (311)
T 3h5d_A 140 YNIPGR-VVVELTPETMLRLADHPNIIGVKECT 171 (311)
T ss_dssp EECHHH-HSSCCCHHHHHHHHTSTTEEEEEECS
T ss_pred Eecccc-cCCCCCHHHHHHHhcCCCEEEEEeCC
Confidence 455543 8999999999999987 666566654
No 388
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=22.10 E-value=2.7e+02 Score=23.79 Aligned_cols=74 Identities=14% Similarity=0.037 Sum_probs=38.9
Q ss_pred cEEEeCCHHHHH-HHHHHHhcCCCCeEEEcCCCchhhHHHH---HHCCCeEEEecCCCCCCCCHHHHHHHhhc------C
Q 014492 148 HILVGCGADELI-DLIMRCVLDPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVER------E 217 (423)
Q Consensus 148 ~i~~t~G~~~al-~~~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~d~~~l~~~i~~------~ 217 (423)
.+++|.|+ .+| ..+.+.|.+.|..|++..-.-....... +..|.++..+..|- -|.+.+++.+++ .
T Consensus 7 ~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv---~~~~~v~~~~~~~~~~~~g 82 (260)
T 2qq5_A 7 VCVVTGAS-RGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDS---SQESEVRSLFEQVDREQQG 82 (260)
T ss_dssp EEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCT---TSHHHHHHHHHHHHHHHTT
T ss_pred EEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCC---CCHHHHHHHHHHHHHhcCC
Confidence 45555544 455 4455567788988876543322222222 22366777776543 245555554431 3
Q ss_pred CceEEEEc
Q 014492 218 KPKCIFLT 225 (423)
Q Consensus 218 ~~~~i~l~ 225 (423)
++..++-+
T Consensus 83 ~id~lvnn 90 (260)
T 2qq5_A 83 RLDVLVNN 90 (260)
T ss_dssp CCCEEEEC
T ss_pred CceEEEEC
Confidence 56666644
No 389
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=21.94 E-value=3.6e+02 Score=22.68 Aligned_cols=87 Identities=11% Similarity=0.072 Sum_probs=50.6
Q ss_pred EEeCCHHHHHHHHHHHhcCCC--CeE--EEcCCCchhhHHHHHHCCCeEEEecCCCCCCCC----HHHHHHHhhcCCceE
Q 014492 150 LVGCGADELIDLIMRCVLDPG--DKI--VDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLN----VELIADAVEREKPKC 221 (423)
Q Consensus 150 ~~t~G~~~al~~~~~~l~~~g--d~V--l~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d----~~~l~~~i~~~~~~~ 221 (423)
++.+|.-..+..++..+.... -.| ++.++.-......|+..|+.+..++.. ++. + -+++.+.+.+.++.+
T Consensus 5 vl~Sg~gsnl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~gIp~~~~~~~-~~~-~r~~~~~~~~~~l~~~~~Dl 82 (212)
T 1jkx_A 5 VLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIAS-AFD-SREAYDRELIHEIDMYAPDV 82 (212)
T ss_dssp EEESSCCHHHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHTTCEEEECCGG-GCS-SHHHHHHHHHHHHGGGCCSE
T ss_pred EEEECCcHHHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHcCCcEEEeCcc-ccc-chhhccHHHHHHHHhcCCCE
Confidence 445555456777777654431 222 344433333456678899998887521 111 2 134556666678998
Q ss_pred EEEcCCCCCcCcCCCHHHHHH
Q 014492 222 IFLTSPNNPDGSIINDEDLLK 242 (423)
Q Consensus 222 i~l~~p~NPtG~~~~~~~l~~ 242 (423)
+++.. .|.+++.+-+..
T Consensus 83 iv~ag----y~~il~~~~l~~ 99 (212)
T 1jkx_A 83 VVLAG----FMRILSPAFVSH 99 (212)
T ss_dssp EEESS----CCSCCCHHHHHH
T ss_pred EEEeC----hhhhCCHHHHhh
Confidence 88754 467888776644
No 390
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=21.90 E-value=1.4e+02 Score=29.55 Aligned_cols=80 Identities=13% Similarity=0.156 Sum_probs=49.0
Q ss_pred cEEEeCCHH----HHHHHHHH-----HhcCCCCeEEEcCCCchhh-------HHHHHHCCCeEEEec---CCCCCCCCHH
Q 014492 148 HILVGCGAD----ELIDLIMR-----CVLDPGDKIVDCPPTFTMY-------EFDAAVNGAAVVKVP---RKSDFSLNVE 208 (423)
Q Consensus 148 ~i~~t~G~~----~al~~~~~-----~l~~~gd~Vl~~~p~y~~~-------~~~~~~~g~~~~~v~---~~~~~~~d~~ 208 (423)
-|++++|++ .++..+.. ...+++|.|++.....+.. .......|++++... ..-....|.+
T Consensus 308 ~vi~~tg~~ge~~~~l~ria~~~h~~~~~~~~~~vi~s~~~~~G~~~~~~~~~~~l~~~g~~v~~~~~~~i~~SgHa~~~ 387 (562)
T 3bk2_A 308 VLILATGSQGQPMSVLHRLAFEGHAKMAIKPGDTVILSSSPIPGNEEAVNRVINRLYALGAYVLYPPTYKVHASGHASQE 387 (562)
T ss_dssp EEEEECCTTSCSHHHHHHHHTTCCSSCCCCTTCEEEECSCCCTTCHHHHHHHHHHHHHTTCEEECTTTSSSCCCSSCCHH
T ss_pred EEEEEcCCCchhHHHHHhhhhcccccccCCCCCEEEEECCCCCCCeEehhhhcCceeeCCCEEEEccCCceEEeCCCCHH
Confidence 367777763 22332221 1137889999877655543 223345788887643 1223467889
Q ss_pred HHHHHhhcCCceEEEEcCC
Q 014492 209 LIADAVEREKPKCIFLTSP 227 (423)
Q Consensus 209 ~l~~~i~~~~~~~i~l~~p 227 (423)
+|...++.-+|+-++..|-
T Consensus 388 eL~~~i~~~~Pk~vipvHG 406 (562)
T 3bk2_A 388 ELKLILNLTTPRFFLPWHG 406 (562)
T ss_dssp HHHHHHHHHCCSEEEEESB
T ss_pred HHHHHHHhcCCCEEEEEcC
Confidence 9988887667888887653
No 391
>1jr2_A Uroporphyrinogen-III synthase; heme biosynthesis, HEAM biosynthesis, lyase; 1.84A {Homo sapiens} SCOP: c.113.1.1
Probab=21.66 E-value=53 Score=29.22 Aligned_cols=60 Identities=17% Similarity=0.133 Sum_probs=39.3
Q ss_pred CCeEEEcCCC-c-----hhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-CCceEEEEcCCCC
Q 014492 170 GDKIVDCPPT-F-----TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTSPNN 229 (423)
Q Consensus 170 gd~Vl~~~p~-y-----~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~~i~l~~p~N 229 (423)
|.+|++..|. - ..+...++..|++++.+|+-.-...+.+.+.+.+.. .+...|+++++|-
T Consensus 21 g~~vlvtr~~~~~~~~~~~l~~~L~~~G~~~~~~P~i~i~~~~~~~l~~~l~~~~~~d~lifTS~na 87 (286)
T 1jr2_A 21 HMKVLLLKDAKEDDCGQDPYIRELGLYGLEATLIPVLSFEFLSLPSFSEKLSHPEDYGGLIFTSPRA 87 (286)
T ss_dssp -CEEEEEESSCCCBTTBCHHHHHHHTTTCEEEEEECEEEEECCHHHHHHHHTCGGGCSEEEECCHHH
T ss_pred CCEEEEEcCCCCCCCCCcHHHHHHHHCCCceEEEeeEEEecCCHHHHHHHHhCcccccEEEEeCHHH
Confidence 5678777664 2 567777888999999999421112355667776632 3567888888764
No 392
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=21.65 E-value=4.1e+02 Score=23.23 Aligned_cols=100 Identities=10% Similarity=0.002 Sum_probs=51.5
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHH---HHHCCCeEEEecCCCCCCCCHHHHHHHhhc----
Q 014492 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVER---- 216 (423)
Q Consensus 144 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---- 216 (423)
++...+++|.|+...=..+...|.+.|..|++..-.-...... .+..|.++..+..|- -|.+.+++.+++
T Consensus 32 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv---~d~~~v~~~~~~~~~~ 108 (291)
T 3cxt_A 32 LKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCDV---TDEDGIQAMVAQIESE 108 (291)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCT---TCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEecC---CCHHHHHHHHHHHHHH
Confidence 3344566666554433455566778888877654332222221 223455555555432 356666655532
Q ss_pred -CCceEEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 217 -EKPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 217 -~~~~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
.++..++-+.-..+.+. -.+.+++.+..+.
T Consensus 109 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~v 141 (291)
T 3cxt_A 109 VGIIDILVNNAGIIRRVPMIEMTAAQFRQVIDI 141 (291)
T ss_dssp TCCCCEEEECCCCCCCCCGGGSCHHHHHHHHHH
T ss_pred cCCCcEEEECCCcCCCCCcccCCHHHHHHHHHH
Confidence 35777775422222221 2466777766654
No 393
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=21.28 E-value=91 Score=28.21 Aligned_cols=54 Identities=13% Similarity=0.113 Sum_probs=0.0
Q ss_pred cCCCCCCCCHHHHHHHhhc---CCceEEEEcCCCCCcCcCCCHHHHHHHHcC-------CCEEEE
Q 014492 198 PRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDEDLLKILEM-------PILVVL 252 (423)
Q Consensus 198 ~~~~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-------~~~li~ 252 (423)
|.++++.+|.+.+++.++. ..+..|+++ -++--+..++.+|..++++. .+.||.
T Consensus 19 Pf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~-GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 82 (309)
T 3fkr_A 19 TFADTGDLDLASQKRAVDFMIDAGSDGLCIL-ANFSEQFAITDDERDVLTRTILEHVAGRVPVIV 82 (309)
T ss_dssp CBCTTSSBCHHHHHHHHHHHHHTTCSCEEES-SGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCcCCCcCHHHHHHHHHHHHHcCCCEEEEC-ccccCcccCCHHHHHHHHHHHHHHhCCCCcEEE
No 394
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=21.24 E-value=1.3e+02 Score=25.86 Aligned_cols=94 Identities=16% Similarity=0.079 Sum_probs=49.7
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc----CCceEE
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER----EKPKCI 222 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~----~~~~~i 222 (423)
..+++|.|+...=..+.+.|.+.|..|++..- ......+..+.++..+..|- -|.+.+++.++. .++..+
T Consensus 10 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r---~~~~~~~~~~~~~~~~~~D~---~~~~~v~~~~~~~~~~g~id~l 83 (257)
T 3tl3_A 10 AVAVVTGGASGLGLATTKRLLDAGAQVVVLDI---RGEDVVADLGDRARFAAADV---TDEAAVASALDLAETMGTLRIV 83 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEES---SCHHHHHHTCTTEEEEECCT---TCHHHHHHHHHHHHHHSCEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC---chHHHHHhcCCceEEEECCC---CCHHHHHHHHHHHHHhCCCCEE
Confidence 34556555543334455567788887776543 22334445577777776543 355655554431 356666
Q ss_pred EEcCCCCCcCc------CCCHHHHHHHHcC
Q 014492 223 FLTSPNNPDGS------IINDEDLLKILEM 246 (423)
Q Consensus 223 ~l~~p~NPtG~------~~~~~~l~~i~~~ 246 (423)
+-+.-....+. ..+.+++++..+.
T Consensus 84 v~nAg~~~~~~~~~~~~~~~~~~~~~~~~v 113 (257)
T 3tl3_A 84 VNCAGTGNAIRVLSRDGVFSLAAFRKIVDI 113 (257)
T ss_dssp EECGGGSHHHHHHHHTCCCSHHHHHHHHHH
T ss_pred EECCCCCCCcccccccccCCHHHHHHHHHH
Confidence 64421111111 1567777777664
No 395
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=21.20 E-value=3.7e+02 Score=22.61 Aligned_cols=100 Identities=17% Similarity=0.199 Sum_probs=52.4
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHH---HHHHCCCeEEEecCCCCCCCCHHHHHHHhhc----
Q 014492 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF---DAAVNGAAVVKVPRKSDFSLNVELIADAVER---- 216 (423)
Q Consensus 144 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---- 216 (423)
++...+++|.|+...=..+...|.+.|..|++..-.-..... ..+..+.++..+..|- -|.+.+++.+++
T Consensus 11 l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~ 87 (260)
T 3awd_A 11 LDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDV---TNTESVQNAVRSVHEQ 87 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT---TCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecC---CCHHHHHHHHHHHHHH
Confidence 334456776655443345556677888887765433222221 2223466666666442 356666665542
Q ss_pred -CCceEEEEcCC-CCCcCc--CCCHHHHHHHHcC
Q 014492 217 -EKPKCIFLTSP-NNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 217 -~~~~~i~l~~p-~NPtG~--~~~~~~l~~i~~~ 246 (423)
.++..|+-+.. ..+.+. -.+.+++.+..+.
T Consensus 88 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~ 121 (260)
T 3awd_A 88 EGRVDILVACAGICISEVKAEDMTDGQWLKQVDI 121 (260)
T ss_dssp HSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHh
Confidence 36777776532 221222 2456666665553
No 396
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=21.12 E-value=2.3e+02 Score=25.54 Aligned_cols=73 Identities=11% Similarity=0.087 Sum_probs=46.8
Q ss_pred CCCeEEEcCCCchhhHHHHHHCCCeEEEec-CCCCCCCCHHHHHHH---hhcCCceEEEEcCCCCCcCcCCCHHHHHHHH
Q 014492 169 PGDKIVDCPPTFTMYEFDAAVNGAAVVKVP-RKSDFSLNVELIADA---VEREKPKCIFLTSPNNPDGSIINDEDLLKIL 244 (423)
Q Consensus 169 ~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~-~~~~~~~d~~~l~~~---i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~ 244 (423)
++..+++..|.| ...++.+|.+.+.+. ...+-.+.+.+|.+. +++.++++|+.. ++. +..-.+.|+
T Consensus 189 ~~~~~v~~H~af---~Yfa~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e-~~~------~~~~~~~ia 258 (312)
T 2o1e_A 189 EKKEFITQHTAF---GYLAKEYGLKQVPIAGLSPDQEPSAASLAKLKTYAKEHNVKVIYFE-EIA------SSKVADTLA 258 (312)
T ss_dssp SCCEEEESSCTT---HHHHHHTTCEEEECSSCCSSSCCCHHHHHHHHHHTTSSCCCEEECS-SCC------CHHHHHHHH
T ss_pred CCCEEEEECCch---HHHHHHCCCeEEEeeccCCCCCCCHHHHHHHHHHHHHcCCCEEEEe-CCC------ChHHHHHHH
Confidence 466788766655 456778999988775 333446666665554 555788888854 332 345677777
Q ss_pred cC-CCEEE
Q 014492 245 EM-PILVV 251 (423)
Q Consensus 245 ~~-~~~li 251 (423)
+. |+.++
T Consensus 259 ~e~g~~v~ 266 (312)
T 2o1e_A 259 SEIGAKTE 266 (312)
T ss_dssp HHTCCEEE
T ss_pred HHhCCcEE
Confidence 65 76654
No 397
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=21.12 E-value=4e+02 Score=22.94 Aligned_cols=97 Identities=8% Similarity=-0.000 Sum_probs=49.2
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHH---HHCCC---eEEEecCCCCCCCCHHHHHHHhhc----
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA---AVNGA---AVVKVPRKSDFSLNVELIADAVER---- 216 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~g~---~~~~v~~~~~~~~d~~~l~~~i~~---- 216 (423)
..+++|.|+...=..+...|.+.|..|++..-.-....... +..|. ++..+..|- -|.+.+++.+++
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv---~~~~~v~~~~~~~~~~ 83 (280)
T 1xkq_A 7 KTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADV---TTEDGQDQIINSTLKQ 83 (280)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCT---TSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecC---CCHHHHHHHHHHHHHh
Confidence 34566555543334555567788888776543332222222 22344 566665432 355666555532
Q ss_pred -CCceEEEEcCCCCCcC------cCCCHHHHHHHHcC
Q 014492 217 -EKPKCIFLTSPNNPDG------SIINDEDLLKILEM 246 (423)
Q Consensus 217 -~~~~~i~l~~p~NPtG------~~~~~~~l~~i~~~ 246 (423)
.++..++-+.-....+ .-.+.+++.+..+.
T Consensus 84 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (280)
T 1xkq_A 84 FGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKL 120 (280)
T ss_dssp HSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHH
Confidence 3677777552222112 13456667666654
No 398
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=21.06 E-value=2.8e+02 Score=24.16 Aligned_cols=79 Identities=8% Similarity=-0.067 Sum_probs=39.9
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCc-hhhHHH---HH-HCCCeEEEecCCCCC-CCCHHHHHHHhhc----
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF-TMYEFD---AA-VNGAAVVKVPRKSDF-SLNVELIADAVER---- 216 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y-~~~~~~---~~-~~g~~~~~v~~~~~~-~~d~~~l~~~i~~---- 216 (423)
..+++|.|+...=..+...|.+.|..|++..-.- ...... .+ ..|.++..+..|-.. .-+.+.+++.+++
T Consensus 24 k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~~~ 103 (288)
T 2x9g_A 24 PAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCFRA 103 (288)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHHHh
Confidence 4556655554333445556777887777654333 222222 11 346677777654321 0005555555432
Q ss_pred -CCceEEEEc
Q 014492 217 -EKPKCIFLT 225 (423)
Q Consensus 217 -~~~~~i~l~ 225 (423)
.++.++|-+
T Consensus 104 ~g~iD~lvnn 113 (288)
T 2x9g_A 104 FGRCDVLVNN 113 (288)
T ss_dssp HSCCCEEEEC
T ss_pred cCCCCEEEEC
Confidence 367777755
No 399
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=21.05 E-value=4.2e+02 Score=23.19 Aligned_cols=100 Identities=9% Similarity=0.011 Sum_probs=51.6
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHH---HHHCCC---eEEEecCCCCCCCCHHHHHHHhhc-
Q 014492 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD---AAVNGA---AVVKVPRKSDFSLNVELIADAVER- 216 (423)
Q Consensus 144 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~---~~~~v~~~~~~~~d~~~l~~~i~~- 216 (423)
++...+++|.|+...=..+...|.+.|..|++..-.-...... .+..|. ++..+..|- -|.+.+++.+++
T Consensus 24 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv---~d~~~v~~~~~~~ 100 (297)
T 1xhl_A 24 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADV---TEASGQDDIINTT 100 (297)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCT---TSHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCC---CCHHHHHHHHHHH
Confidence 3334566665554333455566778898877654333222222 122344 566665432 356666655532
Q ss_pred ----CCceEEEEcCCCCCcCc----CCCHHHHHHHHcC
Q 014492 217 ----EKPKCIFLTSPNNPDGS----IINDEDLLKILEM 246 (423)
Q Consensus 217 ----~~~~~i~l~~p~NPtG~----~~~~~~l~~i~~~ 246 (423)
.++..++-+......+. -.+.+++.+..+.
T Consensus 101 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~v 138 (297)
T 1xhl_A 101 LAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKL 138 (297)
T ss_dssp HHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHH
T ss_pred HHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhH
Confidence 36777775532222222 3466777776664
No 400
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=21.02 E-value=1.5e+02 Score=27.45 Aligned_cols=47 Identities=11% Similarity=0.252 Sum_probs=31.7
Q ss_pred CCCCCCCCHHHHHHHhh---cCCceEEEEcCCCCCcCcCCCHHHHHHHHcC
Q 014492 199 RKSDFSLNVELIADAVE---REKPKCIFLTSPNNPDGSIINDEDLLKILEM 246 (423)
Q Consensus 199 ~~~~~~~d~~~l~~~i~---~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~ 246 (423)
.++++.+|.+.+++.++ +..+..|+++. ++--+..++.+|.+++++.
T Consensus 71 F~~dg~ID~~al~~lv~~li~~Gv~Gl~v~G-TTGE~~~Ls~eEr~~vi~~ 120 (360)
T 4dpp_A 71 YLPDGRFDLEAYDDLVNIQIQNGAEGVIVGG-TTGEGQLMSWDEHIMLIGH 120 (360)
T ss_dssp BCTTSSBCHHHHHHHHHHHHHTTCCEEEESS-TTTTGGGSCHHHHHHHHHH
T ss_pred CCCCCCcCHHHHHHHHHHHHHcCCCEEEecc-cccChhhCCHHHHHHHHHH
Confidence 45667888888887664 35777777653 2333467788888887763
No 401
>3ujp_A Mn transporter subunit; manganese binding protein, metal binding protein; 2.70A {Synechocystis SP} PDB: 1xvl_A 3v63_A
Probab=20.99 E-value=2.6e+02 Score=25.08 Aligned_cols=71 Identities=13% Similarity=0.156 Sum_probs=45.4
Q ss_pred CCeEEEcCCCchhhHHHHHHCCCeEEEec-CCCCCCCCHHHHHH---HhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHc
Q 014492 170 GDKIVDCPPTFTMYEFDAAVNGAAVVKVP-RKSDFSLNVELIAD---AVEREKPKCIFLTSPNNPDGSIINDEDLLKILE 245 (423)
Q Consensus 170 gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~-~~~~~~~d~~~l~~---~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~ 245 (423)
+..+++..|.| ...++.+|.+.+.+. ...+..+.+.+|.+ .+++.++++|+...-.+| ...+.|++
T Consensus 190 ~~~~v~~H~af---~Yfa~~yGl~~~~~~~i~~~~ePs~~~l~~l~~~ik~~~v~~If~e~~~~~-------k~~~~ia~ 259 (307)
T 3ujp_A 190 QRFLVSCEGAF---SYLARDYGMEEIYMWPINAEQQFTPKQVQTVIEEVKTNNVPTIFCESTVSD-------KGQKQVAQ 259 (307)
T ss_dssp GCEEEEEESTT---HHHHHHTTCEEEEEESSCCSSCCCHHHHHHHHHHHHTTTCSEEEEETTSCS-------HHHHHTTT
T ss_pred CCEEEEECchH---HHHHHHCCCcEEEeeccCCCCCCCHHHHHHHHHHHHhcCCcEEEEeCCCCh-------HHHHHHHH
Confidence 35566655554 566788999988664 34445666655554 555678999997644443 45677777
Q ss_pred C-CCEE
Q 014492 246 M-PILV 250 (423)
Q Consensus 246 ~-~~~l 250 (423)
. |+.+
T Consensus 260 e~g~~v 265 (307)
T 3ujp_A 260 ATGARF 265 (307)
T ss_dssp TTCCEE
T ss_pred HhCCce
Confidence 6 6654
No 402
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=20.86 E-value=3.5e+02 Score=23.13 Aligned_cols=95 Identities=13% Similarity=0.096 Sum_probs=49.7
Q ss_pred cEEEeCCHHHHHH-HHHHHhcCCCCeEEEcC-CCchhhH---HHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----C
Q 014492 148 HILVGCGADELID-LIMRCVLDPGDKIVDCP-PTFTMYE---FDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----E 217 (423)
Q Consensus 148 ~i~~t~G~~~al~-~~~~~l~~~gd~Vl~~~-p~y~~~~---~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~ 217 (423)
.+++| |++.+|. .+.+.|.+.|..|++.. ..-.... ...+..+.++..+..|- -|.+.+++.+++ .
T Consensus 27 ~vlIT-Gas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl---~~~~~v~~~~~~~~~~~g 102 (269)
T 3gk3_A 27 VAFVT-GGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDV---ADFESCERCAEKVLADFG 102 (269)
T ss_dssp EEEET-TTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCT---TCHHHHHHHHHHHHHHHS
T ss_pred EEEEE-CCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecC---CCHHHHHHHHHHHHHHcC
Confidence 44554 4445554 45566788898877654 2222111 12223466666666542 255665555432 3
Q ss_pred CceEEEEcCCCCCcCc--CCCHHHHHHHHcC
Q 014492 218 KPKCIFLTSPNNPDGS--IINDEDLLKILEM 246 (423)
Q Consensus 218 ~~~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 246 (423)
++..++-+.-....+. -.+.+++.+..+.
T Consensus 103 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~ 133 (269)
T 3gk3_A 103 KVDVLINNAGITRDATFMKMTKGDWDAVMRT 133 (269)
T ss_dssp CCSEEEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred CCCEEEECCCcCCCcchhhCCHHHHHHHHHH
Confidence 6777776533222222 3467777776664
No 403
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=20.76 E-value=1.1e+02 Score=27.43 Aligned_cols=54 Identities=19% Similarity=0.300 Sum_probs=0.0
Q ss_pred cCCCCCCCCHHHHHHHhhc---CCceEEEEcCCCCCcCcCCCHHHHHHHHcC-------CCEEEE
Q 014492 198 PRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDEDLLKILEM-------PILVVL 252 (423)
Q Consensus 198 ~~~~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-------~~~li~ 252 (423)
|.++++.+|.+.+++.++. ..+..|+++ -++--+..++.+|..++++. .+.||.
T Consensus 14 Pf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 77 (294)
T 3b4u_A 14 PFKTDGTVDIDAMIAHARRCLSNGCDSVTLF-GTTGEGCSVGSRERQAILSSFIAAGIAPSRIVT 77 (294)
T ss_dssp CBCTTSSBCHHHHHHHHHHHHHTTCSEEEES-STTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEE
T ss_pred CCCCCCCcCHHHHHHHHHHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
No 404
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=20.63 E-value=3.3e+02 Score=26.13 Aligned_cols=71 Identities=13% Similarity=0.204 Sum_probs=40.8
Q ss_pred cEEEeCCHHHH----------HHHHHHH----h-cCCCCeEEEcCCCchhhHH----HHHHCCCeEEEecCCCCCCCCHH
Q 014492 148 HILVGCGADEL----------IDLIMRC----V-LDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRKSDFSLNVE 208 (423)
Q Consensus 148 ~i~~t~G~~~a----------l~~~~~~----l-~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~~~~~~d~~ 208 (423)
.|++|+|+|.. +...+.. + +.++|.++...|.|..+.. ..-..|+.++..+ ..|++
T Consensus 174 ~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~~~G~~~v~~~-----~~~~~ 248 (517)
T 3r44_A 174 FIMYTSGTTGHPKGVVHTHESVHSAASSWASTIDVRYRDRLLLPLPMFHVAALTTVIFSAMRGVTLISMP-----QFDAT 248 (517)
T ss_dssp EEEEECC---CCEEEEEEHHHHHHHHHHHHHHSCCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEECS-----SCCHH
T ss_pred EEEECCcccccCceeeeeHHHHHHHHHHHHHhcCCCCCCEEEEeCchHHHHHHHHHHHHHhcCeEEEEeC-----CCCHH
Confidence 57889998842 2211111 1 4578999988887753221 2223788888776 34677
Q ss_pred HHHHHhhcCCceEEE
Q 014492 209 LIADAVEREKPKCIF 223 (423)
Q Consensus 209 ~l~~~i~~~~~~~i~ 223 (423)
.+.+.+.+.++..+.
T Consensus 249 ~~~~~i~~~~~t~~~ 263 (517)
T 3r44_A 249 KVWSLIVEERVCIGG 263 (517)
T ss_dssp HHHHHHHHTTCCEEE
T ss_pred HHHHHHHHhCCeEEE
Confidence 777776655554443
No 405
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=20.47 E-value=1.1e+02 Score=27.25 Aligned_cols=54 Identities=11% Similarity=0.191 Sum_probs=0.0
Q ss_pred cCCCCCCCCHHHHHHHhhc---CCceEEEEcCCCCCcCcCCCHHHHHHHHcC-------CCEEEE
Q 014492 198 PRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDEDLLKILEM-------PILVVL 252 (423)
Q Consensus 198 ~~~~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-------~~~li~ 252 (423)
|.++++.+|.+.+++.++. ..+..|+++ -++--+..++.+|..++++. .+.||.
T Consensus 12 Pf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 75 (292)
T 2ojp_A 12 PMDEKGNVCRASLKKLIDYHVASGTSAIVSV-GTTGESATLNHDEHADVVMMTLDLADGRIPVIA 75 (292)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHHTCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHHcCCCEEEEC-ccccchhhCCHHHHHHHHHHHHHHhCCCCcEEE
No 406
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=20.44 E-value=4e+02 Score=22.67 Aligned_cols=97 Identities=12% Similarity=0.059 Sum_probs=50.7
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHH---HHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CC
Q 014492 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (423)
Q Consensus 147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~ 218 (423)
..+++|.|+...=..+...|.+.|..|++..-.-...... .+..|.++..++.|- -|.+.+++.+++ .+
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~g~ 84 (262)
T 1zem_A 8 KVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDV---TSEEAVIGTVDSVVRDFGK 84 (262)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCT---TCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecC---CCHHHHHHHHHHHHHHhCC
Confidence 3566665554433455566778888777654332222222 222466676666542 255666555432 36
Q ss_pred ceEEEEcCCCC-CcCc--CCCHHHHHHHHcC
Q 014492 219 PKCIFLTSPNN-PDGS--IINDEDLLKILEM 246 (423)
Q Consensus 219 ~~~i~l~~p~N-PtG~--~~~~~~l~~i~~~ 246 (423)
+..++-+.-.. +.+. -.+.+++.+..+.
T Consensus 85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~ 115 (262)
T 1zem_A 85 IDFLFNNAGYQGAFAPVQDYPSDDFARVLTI 115 (262)
T ss_dssp CCEEEECCCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCccccCCHHHHHHHHHH
Confidence 77777553222 2222 2466777776654
No 407
>1wcw_A Uroporphyrinogen III synthase; congenital erythropoietic porph structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} PDB: 1wd7_A 1wcx_A
Probab=20.43 E-value=53 Score=28.60 Aligned_cols=60 Identities=12% Similarity=0.035 Sum_probs=37.6
Q ss_pred CCCeEEEcCCCc-hhhHHHHHHCCCeEEEecCC-CCCCCCHHHHHHHhhc--CCceEEEEcCCCC
Q 014492 169 PGDKIVDCPPTF-TMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVER--EKPKCIFLTSPNN 229 (423)
Q Consensus 169 ~gd~Vl~~~p~y-~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~--~~~~~i~l~~p~N 229 (423)
.|.+|++..|.- ..+...++..|++++.+|.- .... |.+.+.+.+.+ .+...|+++++|-
T Consensus 7 ~g~~vlvtr~~~~~~l~~~L~~~G~~~~~~P~i~i~~~-~~~~l~~~~~~l~~~~d~iiftS~~a 70 (261)
T 1wcw_A 7 DAVRVAYAGLRRKEAFKALAEKLGFTPLLFPVQATEKV-PVPEYRDQVRALAQGVDLFLATTGVG 70 (261)
T ss_dssp -CCEEEECCSTTHHHHHHHHHHTTCEEEECCCEEEEEC-CGGGGHHHHHHHHTCCSEEEECCHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHCCCcEEEeccEEEecC-CHHHHHHHHHhhccCCCEEEEeCHHH
Confidence 377899988774 34556667799999999931 1111 44444444322 3577888888764
No 408
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=20.38 E-value=2.6e+02 Score=24.94 Aligned_cols=88 Identities=16% Similarity=0.170 Sum_probs=49.6
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc--CCceEE
Q 014492 145 ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER--EKPKCI 222 (423)
Q Consensus 145 ~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~--~~~~~i 222 (423)
+.++|.+..|-.+++..+-. . .|..+|.++.-++......+ ..|+.++-++ .++++.+++.+.. .++++.
T Consensus 175 kdNHi~~~G~i~~Av~~ar~-~-~~~~~IeVEv~tl~ea~eAl-~aGaD~I~LD-----n~~~~~l~~av~~~~~~v~ie 246 (287)
T 3tqv_A 175 KENHIRSAGGIAKAVTKAKK-L-DSNKVVEVEVTNLDELNQAI-AAKADIVMLD-----NFSGEDIDIAVSIARGKVALE 246 (287)
T ss_dssp CTTTC----CHHHHHHHHHH-H-CTTSCEEEEESSHHHHHHHH-HTTCSEEEEE-----SCCHHHHHHHHHHHTTTCEEE
T ss_pred eHHHHHHhCCHHHHHHHHHh-h-CCCCcEEEEeCCHHHHHHHH-HcCCCEEEEc-----CCCHHHHHHHHHhhcCCceEE
Confidence 34556666677777766644 3 35566777666665444433 3688888875 4677888776643 233333
Q ss_pred EEcCCCCCcCcCCCHHHHHHHHcCCC
Q 014492 223 FLTSPNNPDGSIINDEDLLKILEMPI 248 (423)
Q Consensus 223 ~l~~p~NPtG~~~~~~~l~~i~~~~~ 248 (423)
. +|- ++.+.+.++++.|+
T Consensus 247 a-------SGG-It~~~i~~~a~tGV 264 (287)
T 3tqv_A 247 V-------SGN-IDRNSIVAIAKTGV 264 (287)
T ss_dssp E-------ESS-CCTTTHHHHHTTTC
T ss_pred E-------ECC-CCHHHHHHHHHcCC
Confidence 2 121 24566777777654
No 409
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=20.26 E-value=4.2e+02 Score=23.82 Aligned_cols=79 Identities=10% Similarity=0.116 Sum_probs=49.4
Q ss_pred cCCCCeEEEcCCCchh----hH---HHHHHCCCeEEEecC-CCCC----CCC---HHHHHHHhhcCCceEEEEcCCCCCc
Q 014492 167 LDPGDKIVDCPPTFTM----YE---FDAAVNGAAVVKVPR-KSDF----SLN---VELIADAVEREKPKCIFLTSPNNPD 231 (423)
Q Consensus 167 ~~~gd~Vl~~~p~y~~----~~---~~~~~~g~~~~~v~~-~~~~----~~d---~~~l~~~i~~~~~~~i~l~~p~NPt 231 (423)
+++||+|-+.+|+... +. ...+..|.+++.-+. ...+ +-| .++|.+++.++.+++|+...--.-+
T Consensus 14 L~~Gd~I~ivaPSs~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rGGyga 93 (311)
T 1zl0_A 14 QPIDGRVALIAPASAIATDVLEATLRQLEVHGVDYHLGRHVEARYRYLAGTVEQRLEDLHNAFDMPDITAVWCLRGGYGC 93 (311)
T ss_dssp CCCCSEEEEECCSBCCCHHHHHHHHHHHHHTTCCEEECTTTTCCBTTBSSCHHHHHHHHHHHHHSTTEEEEEESCCSSCG
T ss_pred CCCcCEEEEEeCCCCCCHHHHHHHHHHHHhCCCEEEECccccccccccCCCHHHHHHHHHHHHhCCCCCEEEEccCCcCH
Confidence 5789999988887742 11 233458999988772 1111 112 4566677777889999987555445
Q ss_pred CcCCCHHHHHHHHc
Q 014492 232 GSIINDEDLLKILE 245 (423)
Q Consensus 232 G~~~~~~~l~~i~~ 245 (423)
-.+++.=+...|.+
T Consensus 94 ~rlLp~LD~~~i~~ 107 (311)
T 1zl0_A 94 GQLLPGLDWGRLQA 107 (311)
T ss_dssp GGGTTTCCHHHHHH
T ss_pred HHHhhccchhhhhc
Confidence 56665544555554
Done!