Query 014498
Match_columns 423
No_of_seqs 217 out of 1761
Neff 8.1
Searched_HMMs 46136
Date Fri Mar 29 05:44:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014498.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014498hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4567 GTPase-activating prot 100.0 2.4E-47 5.1E-52 353.4 25.6 310 45-416 11-362 (370)
2 KOG2058 Ypt/Rab GTPase activat 100.0 7.7E-43 1.7E-47 345.3 21.1 288 8-401 87-386 (436)
3 KOG1092 Ypt/Rab-specific GTPas 100.0 1.5E-41 3.3E-46 325.9 21.0 273 56-418 176-477 (484)
4 KOG2224 Uncharacterized conser 100.0 1.3E-39 2.8E-44 312.1 19.5 316 22-419 384-734 (781)
5 smart00164 TBC Domain in Tre-2 100.0 1.7E-39 3.6E-44 298.4 17.4 194 67-317 2-198 (199)
6 KOG2223 Uncharacterized conser 100.0 1.3E-35 2.9E-40 285.0 22.1 264 59-416 291-557 (586)
7 KOG2197 Ypt/Rab-specific GTPas 100.0 6E-36 1.3E-40 305.1 18.9 355 21-421 29-448 (488)
8 COG5210 GTPase-activating prot 100.0 2.4E-34 5.3E-39 298.3 21.9 240 42-383 182-429 (496)
9 PF00566 RabGAP-TBC: Rab-GTPas 100.0 1.4E-33 3.1E-38 261.2 22.7 169 167-381 46-214 (214)
10 KOG1091 Ypt/Rab-specific GTPas 100.0 2.8E-31 6E-36 263.2 19.5 299 40-415 9-363 (625)
11 KOG1093 Predicted protein kina 100.0 3.2E-31 7E-36 262.7 18.2 201 168-416 391-592 (725)
12 KOG2222 Uncharacterized conser 100.0 6.1E-31 1.3E-35 255.1 17.1 250 58-412 159-416 (848)
13 KOG4347 GTPase-activating prot 100.0 3.9E-29 8.4E-34 252.1 14.5 249 44-399 174-426 (671)
14 KOG2595 Predicted GTPase activ 100.0 2.9E-28 6.3E-33 228.9 16.4 203 168-418 97-304 (395)
15 KOG4436 Predicted GTPase activ 99.9 2.8E-26 6.1E-31 234.7 22.5 254 44-401 550-810 (948)
16 KOG1102 Rab6 GTPase activator 99.9 8.6E-24 1.9E-28 212.2 13.3 185 169-403 187-374 (397)
17 KOG2221 PDZ-domain interacting 99.9 3.9E-22 8.4E-27 177.1 6.0 188 43-292 75-267 (267)
18 KOG3636 Uncharacterized conser 99.7 3.2E-16 6.9E-21 152.3 15.3 177 190-416 91-273 (669)
19 KOG4436 Predicted GTPase activ 99.5 1.9E-13 4.2E-18 141.3 16.4 201 61-317 176-386 (948)
20 KOG1648 Uncharacterized conser 99.4 3.5E-14 7.7E-19 139.5 -1.8 278 31-410 521-798 (813)
21 KOG2801 Probable Rab-GAPs [Int 98.7 3.7E-07 8E-12 85.5 14.3 181 188-415 108-294 (559)
22 PF14961 BROMI: Broad-minded p 97.0 0.024 5.2E-07 63.2 16.8 181 194-421 1086-1284(1296)
23 KOG2224 Uncharacterized conser 85.5 0.29 6.3E-06 48.9 0.4 33 208-240 566-598 (781)
24 KOG2197 Ypt/Rab-specific GTPas 71.0 2.1 4.5E-05 44.7 1.4 76 41-117 148-224 (488)
25 PF10815 ComZ: ComZ; InterPro 28.0 1E+02 0.0023 21.7 3.5 39 262-300 6-44 (56)
26 PF08109 Antimicrobial14: Lact 27.7 40 0.00088 20.1 1.3 15 208-222 3-17 (31)
27 PF08649 DASH_Dad1: DASH compl 25.3 1.7E+02 0.0037 21.1 4.4 50 373-422 3-57 (58)
28 cd00978 chitosanase_glyco_hydr 24.3 44 0.00095 31.0 1.5 68 3-85 143-215 (221)
29 KOG4631 NADH:ubiquinone oxidor 21.6 78 0.0017 24.9 2.2 26 58-83 25-51 (100)
30 KOG2141 Protein involved in hi 21.2 6.3E+02 0.014 27.8 9.4 65 168-234 335-400 (822)
No 1
>KOG4567 consensus GTPase-activating protein [General function prediction only]
Probab=100.00 E-value=2.4e-47 Score=353.42 Aligned_cols=310 Identities=25% Similarity=0.444 Sum_probs=258.1
Q ss_pred HHHHhhccC-CCccHHHHHHHHHhCCCC--CCChHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccccC
Q 014498 45 RWHAAFSED-GHLDIAKVLRRIQRGGIH--PSIKGLVWEFLLGCYDPNSTFEERNQIRQQRRQQYAAWKTECQNIVPIIG 121 (423)
Q Consensus 45 ~W~~~l~~~-~~i~~~kll~~l~~~GIP--~~~R~~vW~~LLg~~~~~~~~~~~~~i~~~~~~~Y~~l~~~~~~~~~~~~ 121 (423)
..++.++.. ..+|..+ ++.++..|+| +++|+.+|++|||++|++.+ .|...+.++|..|..+.++.. ..+|
T Consensus 11 ~~edvl~~~~~~id~ke-lr~~~~~g~p~~~~lR~~~WkllL~Yl~~er~--~w~s~La~~R~~Y~q~i~e~v---~epg 84 (370)
T KOG4567|consen 11 SIEDVLNPADDTIDLKE-LRKLCFYGVPDDASLRPLVWKLLLGYLPPERS--KWTSFLAKKRSLYKQFIEEIV---DEPG 84 (370)
T ss_pred hHHHhhccccchhhHHH-HHHHhhcCCCCccchhHhHHHHHHhhcChhhh--hhHHHHHHHHHHHHHHHHHhc---cCcc
Confidence 444444443 3377776 7777788999 79999999999999999885 567889999999999988843 2222
Q ss_pred CCcccccccccCCCCccCCCCccccCCCCCCCCccchHHHHHHHHHHhHHhhccccCCCCCcCCCChh------------
Q 014498 122 SGKFITAAIVTDDGQSLQDSNRDSLDQGWHVDGAISDKKVLQWMLGLHQIGLDVVRTDRSLVFYESET------------ 189 (423)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~qI~~Dv~Rt~~~~~~f~~~~------------ 189 (423)
... .....+..++..++|++.++.+.| ....+..+.+.||++||.||.|+..+|+...
T Consensus 85 ~~~--~~~~v~~~D~~~dhPls~~~~sdw--------n~ff~d~e~l~QIdrDvrr~~pdi~ff~~~~~~p~~~~~~~~~ 154 (370)
T KOG4567|consen 85 KKD--NSKKVDSNDTDEDHPLSLGPTSDW--------NTFFKDCEVLLQIDRDVRRTHPDISFFQLASSYPCRQGMDSRR 154 (370)
T ss_pred ccc--cccccccCcccccCCCCCCchhhH--------HHHhhhhHHHHHHHHHHHHhCcchHhhhhccccccccchhhHh
Confidence 211 111222333567789888877777 3455566789999999999999999886521
Q ss_pred ---------------hHHHHHHHHHHHHHhcCCCcccCChhhHHHHHHHhcC----------CHHHHHHHHHHHHHHhhh
Q 014498 190 ---------------NQAKLWDVLAIYSWVDNDIGYVQGMNDICSPMIVLLE----------NEADAFWCFEHTMRRLRE 244 (423)
Q Consensus 190 ---------------~~~~L~rIL~~y~~~np~igY~QGm~~iaa~ll~~~~----------~E~~aF~~f~~l~~~~~~ 244 (423)
......|||.+|+..||.|||+||||+|+||+++++. .|+|||+||+.||..+++
T Consensus 155 ~i~~~q~~~~n~~gl~~~~~erilfiyAKLNpGi~YVQGMNEIlaPiYYVfa~Dpd~e~~~~aEaDaFFCF~~LMseirD 234 (370)
T KOG4567|consen 155 RINASQEAGRNRLGLTRFAAERILFIYAKLNPGIGYVQGMNEILAPIYYVFANDPDEENRAYAEADAFFCFTQLMSEIRD 234 (370)
T ss_pred hhhhhhHhhhcccchhhhHHHHHHHHHhhcCCcchHHhhhHHHhhhhheeeccCCchhhHHhhhhhHHHHHHHHHHHHHH
Confidence 1334578999999999999999999999999999984 389999999999999999
Q ss_pred cccCC--CChhhHHHHHHHHHHHHHHHCHHHHHHHHhCCCCccchHHHHHHHhhcccCChhhHHHHHHHHhccccCCCch
Q 014498 245 NFRTN--TGMIGVQSQLSTLSQIIRTIDPKLHQHLEDLDGGEYLFAFRMLMVLFRREFSFVDALYLWELMWAMEYNPNIF 322 (423)
Q Consensus 245 ~~~~~--~~~~~~~~~~~~~~~lL~~~dP~L~~hL~~~~i~~~~f~~~W~~tlF~~~l~~~~vlriWD~~~~~~~~~~~f 322 (423)
+|..+ ++.-|++..+..+..+|+.+|-+||.||++.+|.|+.|+++|+++|++.+||++++++|||.+|++...
T Consensus 235 nf~k~LDdS~~GI~~~Msr~~~~lk~~D~EL~~~L~~~~i~PqfyaFRWitLLLsQEF~lpDvi~lWDsl~sD~~r---- 310 (370)
T KOG4567|consen 235 NFIKTLDDSVGGIHFLMSRLSELLKKHDEELWRHLEEKEIHPQFYAFRWITLLLSQEFPLPDVIRLWDSLLSDPQR---- 310 (370)
T ss_pred HHHHhccccccchHHHHHHHHHHHHHhhHHHHHHHHhcCCCccchhHHHHHHHHhccCCchhHHHHHHHHhcChhh----
Confidence 99764 455588888999999999999999999999999999999999999999999999999999999987543
Q ss_pred hhhcccCCCCCCcccchhHhhhhchhhhhhhhcCCCCCCchHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHhhhcCCCC
Q 014498 323 SLYESNSSTSDGRQVNDKQLKQCGKFERKNVKTGLPDKTSALSVFLVASVLETKNKKLLREAKGLDDVVKILADITGNLD 402 (423)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ail~~~r~~il~~~~~~~~il~~l~~l~~~~d 402 (423)
.+|++++|+|||...|+.||+ .||+.-+++|++-| ..|
T Consensus 311 ---------------------------------------fd~Ll~iCcsmlil~Re~il~--~DF~~nmkLLQ~yp-~td 348 (370)
T KOG4567|consen 311 ---------------------------------------FDFLLYICCSMLILVRERILE--GDFTVNMKLLQNYP-TTD 348 (370)
T ss_pred ---------------------------------------hHHHHHHHHHHHHHHHHHHHh--cchHHHHHHHhcCC-CCC
Confidence 358999999999999999999 69999999999999 889
Q ss_pred HHHHHHHHHHHHHH
Q 014498 403 AKKACNEALKIQKK 416 (423)
Q Consensus 403 ~~~~l~~A~~l~~~ 416 (423)
+..+++.|-.|..+
T Consensus 349 i~~~l~~A~~Lr~~ 362 (370)
T KOG4567|consen 349 ISKMLAVADSLRDK 362 (370)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999998743
No 2
>KOG2058 consensus Ypt/Rab GTPase activating protein [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=7.7e-43 Score=345.34 Aligned_cols=288 Identities=23% Similarity=0.348 Sum_probs=228.1
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCC--HHHHHHhhccC-------CCccHHHHHHHHHhCCCCCCChHHH
Q 014498 8 KYGGEDLDSYYPIRPECQADVPKVRFKARAGKTLS--ARRWHAAFSED-------GHLDIAKVLRRIQRGGIHPSIKGLV 78 (423)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~W~~~l~~~-------~~i~~~kll~~l~~~GIP~~~R~~v 78 (423)
+++|.+.-+++....... ...+.+.-+.+.+... ..+|.-.+.++ ..+.....++.++|+|||+++|+.|
T Consensus 87 ~~~~~~~~~~~~~~~~~~-~~~~~k~~s~~~~~~~r~~~~~~l~~~~~~~~~~~~~~~~~s~elk~liRkGiP~~~R~~V 165 (436)
T KOG2058|consen 87 KNNGFDQYSLQKLIGLPP-SDGYLKWLSSYLAYEERRQLRWELELQSNIKLHSPNDFPPRSDELKRLIRKGIPPELRGEV 165 (436)
T ss_pred ccCcccccchhhcccCCc-chhhhHHHHHhhhhhhhHHHHHHHHhhhhhcccccccccCCcHHHHHHHHcCCChhhhhHH
Confidence 555666666555533322 3343344333333332 35787776663 1122223489999999999999999
Q ss_pred HHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCcccccccccCCCCccCCCCccccCCCCCCCCccch
Q 014498 79 WEFLLGCYDPNSTFEERNQIRQQRRQQYAAWKTECQNIVPIIGSGKFITAAIVTDDGQSLQDSNRDSLDQGWHVDGAISD 158 (423)
Q Consensus 79 W~~LLg~~~~~~~~~~~~~i~~~~~~~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 158 (423)
|..+.|.... ...+..|+.+...-..
T Consensus 166 W~~~~g~~~~-----------~~~~~~yq~ll~~~~~------------------------------------------- 191 (436)
T KOG2058|consen 166 WWVLSGARRQ-----------LNYPGYYQELLRKGDE------------------------------------------- 191 (436)
T ss_pred HHHHhcchhh-----------ccCchhHHHHHhcCCC-------------------------------------------
Confidence 9999993211 1115677776554110
Q ss_pred HHHHHHHHHHhHHhhccccCCCCC-cCCCChh--hHHHHHHHHHHHHHhcCCCcccCChhhHHHHHHHhcCCHHHHHHHH
Q 014498 159 KKVLQWMLGLHQIGLDVVRTDRSL-VFYESET--NQAKLWDVLAIYSWVDNDIGYVQGMNDICSPMIVLLENEADAFWCF 235 (423)
Q Consensus 159 ~~~~~~~~~~~qI~~Dv~Rt~~~~-~~f~~~~--~~~~L~rIL~~y~~~np~igY~QGm~~iaa~ll~~~~~E~~aF~~f 235 (423)
++. ...+||+.|+.||||++ +.|..+. ++..|+|||.||+.+||.||||||||.+||++|+++..|++|||||
T Consensus 192 ~~~----~~~~qI~~DL~RTfP~n~~~~~~~~~~~~~~LrRvL~Aya~hNp~vGYCQGmNflAallLL~~~~EE~AFW~L 267 (436)
T KOG2058|consen 192 KKS----PVVKQIKLDLPRTFPDNFKGFDSEDSDGRQTLRRVLLAYARHNPSVGYCQGMNFLAALLLLLMPSEEDAFWML 267 (436)
T ss_pred ccc----hHHHHHHhccccccCCCcccCCCCCchHHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHhcCChHHHHHHH
Confidence 000 25789999999999999 7887754 4899999999999999999999999999999999998899999999
Q ss_pred HHHHHHhhhcccCCCChhhHHHHHHHHHHHHHHHCHHHHHHHHhCCCCccchHHHHHHHhhcccCChhhHHHHHHHHhcc
Q 014498 236 EHTMRRLRENFRTNTGMIGVQSQLSTLSQIIRTIDPKLHQHLEDLDGGEYLFAFRMLMVLFRREFSFVDALYLWELMWAM 315 (423)
Q Consensus 236 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~~dP~L~~hL~~~~i~~~~f~~~W~~tlF~~~l~~~~vlriWD~~~~~ 315 (423)
+.+++++.+.|+ .+++.|.+.+..+|+.+|+..+|+|+.||..++++..++++.||+|+|+..+|.+.++||||++|.+
T Consensus 268 v~iie~~lp~Yy-t~nL~g~qvDQ~VL~~llre~lPkl~~~l~~~~~~~~l~t~~wfLt~f~d~lP~~t~LrIwD~~f~e 346 (436)
T KOG2058|consen 268 VALIENYLPRYY-TPNLIGSQVDQKVLRELLREKLPKLSLHLEGNGVDASLETLPWFLTLFVDILPSETVLRIWDCLFYE 346 (436)
T ss_pred HHHHHHhchhhc-CchhhhhhccHHHHHHHHHHHCHHHHHhhhhcCCCeeeeehhhhHHHhcccccHHHHHHHHHHHHhc
Confidence 999999888854 7889999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccCCCchhhhcccCCCCCCcccchhHhhhhchhhhhhhhcCCCCCCchHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHh
Q 014498 316 EYNPNIFSLYESNSSTSDGRQVNDKQLKQCGKFERKNVKTGLPDKTSALSVFLVASVLETKNKKLLREAKGLDDVVKILA 395 (423)
Q Consensus 316 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ail~~~r~~il~~~~~~~~il~~l~ 395 (423)
|.. +++-+|+|++..++++|+. +.+..++++++.
T Consensus 347 Gsk---------------------------------------------vlfr~Alai~k~~ee~il~-~~~~~~i~~~~~ 380 (436)
T KOG2058|consen 347 GSK---------------------------------------------VLFRVALAILKKHEEEILK-EDSSKEILRVLP 380 (436)
T ss_pred ccH---------------------------------------------HHHHHHHHHHHHhHHHHhc-CCCHHHHHHHHH
Confidence 754 3444999999999999999 578999999998
Q ss_pred hhcCCC
Q 014498 396 DITGNL 401 (423)
Q Consensus 396 ~l~~~~ 401 (423)
.++..+
T Consensus 381 ~~~~~~ 386 (436)
T KOG2058|consen 381 DLTKRS 386 (436)
T ss_pred HHHHHh
Confidence 887544
No 3
>KOG1092 consensus Ypt/Rab-specific GTPase-activating protein GYP1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.5e-41 Score=325.90 Aligned_cols=273 Identities=25% Similarity=0.484 Sum_probs=241.5
Q ss_pred ccHHHHHHHHHhCCCCCCChHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCcccccccccCCC
Q 014498 56 LDIAKVLRRIQRGGIHPSIKGLVWEFLLGCYDPNSTFEERNQIRQQRRQQYAAWKTECQNIVPIIGSGKFITAAIVTDDG 135 (423)
Q Consensus 56 i~~~kll~~l~~~GIP~~~R~~vW~~LLg~~~~~~~~~~~~~i~~~~~~~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (423)
+|.. +++.++++|||..+|+.+|++|+|++|+++ +-++..++.++..|.+++.++....... +.
T Consensus 176 id~~-~Lr~l~w~Gvp~~~Rp~~Wkll~gylp~n~--~rr~~~l~~Kr~eY~~~v~~~~~~~~~~------------~~- 239 (484)
T KOG1092|consen 176 IDLE-KLRKLCWNGVPSKMRPIVWKLLSGYLPPNS--DRREGTLQRKRKEYVDSVVQYFDSLTNG------------DE- 239 (484)
T ss_pred ccHH-HHHHHccCCCCccccCccceeeecccCcch--hhhhhhHHHHHHHHHHHHHHHhccCCCc------------cc-
Confidence 4554 599999999999999999999999999988 4567788999999999999986431100 00
Q ss_pred CccCCCCccccCCCCCCCCccchHHHHHHHHHHhHHhhccccCCCCCcCCCChhhHHHHHHHHHHHHHhcCCCcccCChh
Q 014498 136 QSLQDSNRDSLDQGWHVDGAISDKKVLQWMLGLHQIGLDVVRTDRSLVFYESETNQAKLWDVLAIYSWVDNDIGYVQGMN 215 (423)
Q Consensus 136 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~qI~~Dv~Rt~~~~~~f~~~~~~~~L~rIL~~y~~~np~igY~QGm~ 215 (423)
-.+..+||..|+.|+.|..++|..+..++.+.|||..++.++|-.||+||.+
T Consensus 240 ----------------------------~~d~~rQI~id~prm~p~~~l~q~~~vq~~lerIl~iwairhpAsGyvqgin 291 (484)
T KOG1092|consen 240 ----------------------------DQDTWRQIPIDIPRMNPHIPLFQQKIVQEMLERILYIWAIRHPASGYVQGIN 291 (484)
T ss_pred ----------------------------cCccccccccCCCCCCccccchhhHHHHHHHHHHHHHHHHhcccccccccce
Confidence 0135789999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhcC-------------------------CHHHHHHHHHHHHHHhhhcccCCCChhhHHHHHHHHHHHHHHHC
Q 014498 216 DICSPMIVLLE-------------------------NEADAFWCFEHTMRRLRENFRTNTGMIGVQSQLSTLSQIIRTID 270 (423)
Q Consensus 216 ~iaa~ll~~~~-------------------------~E~~aF~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~~d 270 (423)
+++.+++.++. -|+++|||+..|++.+.++|.+.. +|++.....++.|++..|
T Consensus 292 dlvtpf~vvfl~e~l~~~~~~~~~d~~~l~~E~~~~iEADsyWClskLLD~IQDNYtfaQ--pGIq~kV~~L~eLv~RID 369 (484)
T KOG1092|consen 292 DLVTPFFVVFLSEYLGPIMDVESIDMSLLPAENAEDIEADAYWCLSKLLDGIQDNYTFAQ--PGIQRKVKNLKELVQRID 369 (484)
T ss_pred eeechhhhhhhHhhcCccccccccchhhccHHHHhhhhhhHHHHHHHHHHHhhhhhhhcC--hhHHHHHHHHHHHHHHhc
Confidence 99999998872 289999999999999999998764 499999999999999999
Q ss_pred HHHHHHHHhCCCCccchHHHHHHHhhcccCChhhHHHHHHHHhccccCCCchhhhcccCCCCCCcccchhHhhhhchhhh
Q 014498 271 PKLHQHLEDLDGGEYLFAFRMLMVLFRREFSFVDALYLWELMWAMEYNPNIFSLYESNSSTSDGRQVNDKQLKQCGKFER 350 (423)
Q Consensus 271 P~L~~hL~~~~i~~~~f~~~W~~tlF~~~l~~~~vlriWD~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (423)
+.|++||+++|++-.+|++||+-+||.|+||+..++|+||.|++++...
T Consensus 370 ~~~hkHlq~~gveylQFAFRWmNcLLmRE~pl~~~iRlWDTY~aE~dgf------------------------------- 418 (484)
T KOG1092|consen 370 EPLHKHLQEHGVEYLQFAFRWMNCLLMREFPLRCTIRLWDTYLAEPDGF------------------------------- 418 (484)
T ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHhhccchhHHHHHHHhhcCccch-------------------------------
Confidence 9999999999999999999999999999999999999999999986654
Q ss_pred hhhhcCCCCCCchHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHhhhcCCC----CHHHHHHHHHHHHHHHH
Q 014498 351 KNVKTGLPDKTSALSVFLVASVLETKNKKLLREAKGLDDVVKILADITGNL----DAKKACNEALKIQKKYL 418 (423)
Q Consensus 351 ~~~~~~~~~~~~~~~l~~~~ail~~~r~~il~~~~~~~~il~~l~~l~~~~----d~~~~l~~A~~l~~~~~ 418 (423)
+.|++|+|+|.|..-+++|++ +||.+++.+|+++|..- |++.+++.|..+..-|.
T Consensus 419 -----------~~FhvYvcAAFL~kW~~eL~e--~DFQ~~ilfLQnlPT~~W~d~eIellLseA~~~k~~f~ 477 (484)
T KOG1092|consen 419 -----------NEFHVYVCAAFLLKWSSELME--NDFQELILFLQNLPTHNWSDREIELLLSEAFRLKSVFS 477 (484)
T ss_pred -----------HHHHHHHHHHHHHHHHHHHHH--hHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHHHHHHc
Confidence 457999999999999999996 69999999999999554 78888888887765553
No 4
>KOG2224 consensus Uncharacterized conserved protein, contains TBC domain [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=1.3e-39 Score=312.05 Aligned_cols=316 Identities=25% Similarity=0.533 Sum_probs=263.6
Q ss_pred CCCCCCCCcccccccCCCC--CCHHHHHH-hhccCCCccHH-HHHHHHHhCCCCCCChHHHHHHhhCCCCCCCCHHHHHH
Q 014498 22 PECQADVPKVRFKARAGKT--LSARRWHA-AFSEDGHLDIA-KVLRRIQRGGIHPSIKGLVWEFLLGCYDPNSTFEERNQ 97 (423)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~--l~~~~W~~-~l~~~~~i~~~-kll~~l~~~GIP~~~R~~vW~~LLg~~~~~~~~~~~~~ 97 (423)
-.|.++++..+++++.+.- +.-.-|.. .+++.|.+..+ ++++.++.|||..++|+.||++||.+|+..+|.++|..
T Consensus 384 ~i~rpel~~se~hpde~~~kki~~n~~~~t~lne~gqiedd~~lrk~iffggid~sir~evwpfllk~ys~est~edr~a 463 (781)
T KOG2224|consen 384 MICRPELKKSEMHPDEGDVKKIGTNAFLGTHLNEKGQIEDDLKLRKAIFFGGIDKSIRGEVWPFLLKCYSFESTFEDRAA 463 (781)
T ss_pred eeecCCCCccccCCccchhhhhhHHHHHHhhhhhcccchhHHHhhhhheeccchhhhhcchhHHHHHHhccccchhHHHH
Confidence 4566778888888877653 44567876 77778888444 67788999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHh-hhccccCCCcccccccccCCCCccCCCCccccCCCCCCCCccchHHHHHHHHHHhHHhhccc
Q 014498 98 IRQQRRQQYAAWKTECQ-NIVPIIGSGKFITAAIVTDDGQSLQDSNRDSLDQGWHVDGAISDKKVLQWMLGLHQIGLDVV 176 (423)
Q Consensus 98 i~~~~~~~Y~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~qI~~Dv~ 176 (423)
++..+|+.|++....-. +|.| ++...-|+.+.-.++|||.
T Consensus 464 l~~~krkey~eiqqkrlysmsp---------------------------------------eeh~~fwknvq~tvdkdvv 504 (781)
T KOG2224|consen 464 LMDIKRKEYEEIQQKRLYSMSP---------------------------------------EEHIAFWKNVQFTVDKDVV 504 (781)
T ss_pred HHHHHHHHHHHHHHHHhhcCCH---------------------------------------HHHHHHHhheEEEEeccee
Confidence 99999999998866532 3432 3344456656667899999
Q ss_pred cCCCCCcCCCCh--hhHHHHHHHHHHHHHhcCCCcccCChhhHHHHHHHhcCCHHHHHHHHHHHHHHhh-----------
Q 014498 177 RTDRSLVFYESE--TNQAKLWDVLAIYSWVDNDIGYVQGMNDICSPMIVLLENEADAFWCFEHTMRRLR----------- 243 (423)
Q Consensus 177 Rt~~~~~~f~~~--~~~~~L~rIL~~y~~~np~igY~QGm~~iaa~ll~~~~~E~~aF~~f~~l~~~~~----------- 243 (423)
||.++++||..+ ++.+.++|||..|+.+||.+||.|||+++.||.|.-..+|.++||||+.||+.+.
T Consensus 505 rtdrnn~ff~gddnpn~e~mk~illn~avyn~~m~ysqgmsdllapvlcevqnesetfwcfvglmqgmsdlvapilaevl 584 (781)
T KOG2224|consen 505 RTDRNNPFFCGDDNPNTESMKNILLNFAVYNPAMGYSQGMSDLLAPVLCEVQNESETFWCFVGLMQGMSDLVAPILAEVL 584 (781)
T ss_pred eccCCCCcccCCCCCcHHHHHHHHHhheeecccccccccchhhcchhhhhhccccchhhhhhhhhccchhhhhhHHHhhh
Confidence 999999999875 5789999999999999999999988888888877777677777777777766321
Q ss_pred ---------------hcccCCCChhhHHHHHHHHHHHHHHHCHHHHHHHHhCCCCc--cchHHHHHHHhhcccCChhhHH
Q 014498 244 ---------------ENFRTNTGMIGVQSQLSTLSQIIRTIDPKLHQHLEDLDGGE--YLFAFRMLMVLFRREFSFVDAL 306 (423)
Q Consensus 244 ---------------~~~~~~~~~~~~~~~~~~~~~lL~~~dP~L~~hL~~~~i~~--~~f~~~W~~tlF~~~l~~~~vl 306 (423)
..|...+....+...+..++.|++...|..|+||.++|-+. .+||.+|++.+|.|+||-..++
T Consensus 585 desdtfwcfvglmqna~fv~sp~d~dmd~~l~ylreliri~~~~fykhl~q~~ed~lellfchrwlllcfkref~ea~ai 664 (781)
T KOG2224|consen 585 DESDTFWCFVGLMQNAFFVCSPRDEDMDHNLLYLRELIRIMHPHFYKHLEQHGEDGLELLFCHRWLLLCFKREFPEAEAI 664 (781)
T ss_pred ccccchhhhhhhhcceEEEeCCcchhhhHhHHHHHHHHHHhhHHHHHHHHHhCcchhhHHHHHHHHHHHhhhcccHHHHH
Confidence 23555666778889999999999999999999999987543 3799999999999999999999
Q ss_pred HHHHHHhccccCCCchhhhcccCCCCCCcccchhHhhhhchhhhhhhhcCCCCCCchHHHHHHHHHHHHHHHHHHHhcCC
Q 014498 307 YLWELMWAMEYNPNIFSLYESNSSTSDGRQVNDKQLKQCGKFERKNVKTGLPDKTSALSVFLVASVLETKNKKLLREAKG 386 (423)
Q Consensus 307 riWD~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ail~~~r~~il~~~~~ 386 (423)
|||+..|++ +... -|++|+|+||+-.+-+..+.....
T Consensus 665 riweacwa~-y~td------------------------------------------yfhlficlaiiaiy~ddvi~q~l~ 701 (781)
T KOG2224|consen 665 RIWEACWAH-YLTD------------------------------------------YFHLFICLAIIAIYADDVIAQNLA 701 (781)
T ss_pred HHHHHHHHH-hhHH------------------------------------------HHHHHHHHHHHHHhhhHHHHhhcC
Confidence 999999986 3222 279999999999999999988889
Q ss_pred hHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHh
Q 014498 387 LDDVVKILADITGNLDAKKACNEALKIQKKYLS 419 (423)
Q Consensus 387 ~~~il~~l~~l~~~~d~~~~l~~A~~l~~~~~~ 419 (423)
.++++.-+.++.-.||-+-++.+|..+..||+-
T Consensus 702 ~demllhf~nlam~mdgelilrkar~ll~qfr~ 734 (781)
T KOG2224|consen 702 PDEMLLHFGNLAMHMDGELILRKARGLLHQFRL 734 (781)
T ss_pred chhHHHhhhhhhhhcCchhhHHHHHHHHHHHhh
Confidence 999999999999999999999999999999974
No 5
>smart00164 TBC Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs. Widespread domain present in Gyp6 and Gyp7, thereby giving rise to the notion that it performs a GTP-activator activity on Rab-like GTPases.
Probab=100.00 E-value=1.7e-39 Score=298.35 Aligned_cols=194 Identities=33% Similarity=0.628 Sum_probs=170.8
Q ss_pred hCCCCCCChHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCcccccccccCCCCccCCCCcccc
Q 014498 67 RGGIHPSIKGLVWEFLLGCYDPNSTFEERNQIRQQRRQQYAAWKTECQNIVPIIGSGKFITAAIVTDDGQSLQDSNRDSL 146 (423)
Q Consensus 67 ~~GIP~~~R~~vW~~LLg~~~~~~~~~~~~~i~~~~~~~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 146 (423)
++|||+.+|+.+|+.++|+.+...+ ..+..|+++.++....
T Consensus 2 ~~Gip~~~R~~vW~~ll~~~~~~~~---------~~~~~Y~~l~~~~~~~------------------------------ 42 (199)
T smart00164 2 RKGVPPSLRGVVWKLLLNAQPMDTS---------ADKDLYSRLLKETAPK------------------------------ 42 (199)
T ss_pred CCCCCHHHHHHHHHHHhCCchhhhc---------ccchHHHHHHHhhcCC------------------------------
Confidence 6899999999999999999765432 1357888887764210
Q ss_pred CCCCCCCCccchHHHHHHHHHHhHHhhccccCCCCCcCCCCh--hhHHHHHHHHHHHHHhcCCCcccCChhhHHHHHHHh
Q 014498 147 DQGWHVDGAISDKKVLQWMLGLHQIGLDVVRTDRSLVFYESE--TNQAKLWDVLAIYSWVDNDIGYVQGMNDICSPMIVL 224 (423)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~qI~~Dv~Rt~~~~~~f~~~--~~~~~L~rIL~~y~~~np~igY~QGm~~iaa~ll~~ 224 (423)
+. ...++|++||.||+|++++|+.. ..++.|+|||.+|+.+||++||||||++||++++++
T Consensus 43 -----------~~------~~~~~I~~Dv~Rt~~~~~~f~~~~~~~~~~L~~IL~~~~~~~p~~gY~QGm~~i~~~ll~~ 105 (199)
T smart00164 43 -----------DK------SIVHQIEKDLRRTFPEHSFFQDKEGPGQESLRRVLKAYALYNPEVGYCQGMNFLAAPLLLV 105 (199)
T ss_pred -----------Ch------hhHHHHhcccCCCCCCchhhcCCCcccHHHHHHHHHHHHHHCCCCceeccHHHHHHHHHHh
Confidence 00 13579999999999999999864 589999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHhhhcccCCCChhhHHHHHHHHHHHHHHHCHHHHHHHHh-CCCCccchHHHHHHHhhcccCChh
Q 014498 225 LENEADAFWCFEHTMRRLRENFRTNTGMIGVQSQLSTLSQIIRTIDPKLHQHLED-LDGGEYLFAFRMLMVLFRREFSFV 303 (423)
Q Consensus 225 ~~~E~~aF~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~~dP~L~~hL~~-~~i~~~~f~~~W~~tlF~~~l~~~ 303 (423)
+.+|++|||||+++|++....++ .+++.++...+..++.+|+.++|+||+||.+ .++++.+|+++|++|+|++++|++
T Consensus 106 ~~~e~~af~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~ll~~~~p~l~~~l~~~~~i~~~~~~~~W~~~lF~~~~~~~ 184 (199)
T smart00164 106 MPDEEDAFWCLVKLMERYGPNFY-LPDMSGLQLDLLQLDRLVKEYDPDLYKHLKDKLGIDPSLYALRWFLTLFARELPLE 184 (199)
T ss_pred cCCHHHHHHHHHHHHHHhCcccC-CCChHHHHHHHHHHHHHHHHHCHHHHHHHHHhcCCCchhHHHHHHHHHHHhhCCHH
Confidence 98899999999999999877664 5667789999999999999999999999996 999999999999999999999999
Q ss_pred hHHHHHHHHhcccc
Q 014498 304 DALYLWELMWAMEY 317 (423)
Q Consensus 304 ~vlriWD~~~~~~~ 317 (423)
.++||||.++++|.
T Consensus 185 ~~~riwD~~l~eG~ 198 (199)
T smart00164 185 IVLRIWDVLFAEGS 198 (199)
T ss_pred HHHHHHHHHHhcCC
Confidence 99999999999874
No 6
>KOG2223 consensus Uncharacterized conserved protein, contains TBC domain [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=1.3e-35 Score=284.95 Aligned_cols=264 Identities=21% Similarity=0.345 Sum_probs=213.2
Q ss_pred HHHHHHHHhCCCCCCChHHHHHHhhCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHhhhccccCCCcccccccccCCCCc
Q 014498 59 AKVLRRIQRGGIHPSIKGLVWEFLLGCYDPNSTFEERNQIRQQRRQQ-YAAWKTECQNIVPIIGSGKFITAAIVTDDGQS 137 (423)
Q Consensus 59 ~kll~~l~~~GIP~~~R~~vW~~LLg~~~~~~~~~~~~~i~~~~~~~-Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (423)
.+-++.+++.|||+.+|+.||.+..|. ..+-|.+-....+.+..+. ..++-++.
T Consensus 291 SrR~relWwQGiP~~VRGkvW~laIGN-el~it~elfd~~la~Aker~ak~~aeq~------------------------ 345 (586)
T KOG2223|consen 291 SRRVRELWWQGIPPSVRGKVWSLAIGN-ELNITYELFDIALARAKEREAKSLAEQM------------------------ 345 (586)
T ss_pred hHHHHHHHHccCChhhcchhhHhhhCc-ccccCHHHHHHHHHHHHHHHHHHHHhhc------------------------
Confidence 345789999999999999999999994 3444433333332222222 11111110
Q ss_pred cCCCCccccCCCCCCCCccchHHHHHHHHHHhHHhhccccCCCCCcCCCCh-hhHHHHHHHHHHHHHhcCCCcccCChhh
Q 014498 138 LQDSNRDSLDQGWHVDGAISDKKVLQWMLGLHQIGLDVVRTDRSLVFYESE-TNQAKLWDVLAIYSWVDNDIGYVQGMND 216 (423)
Q Consensus 138 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~qI~~Dv~Rt~~~~~~f~~~-~~~~~L~rIL~~y~~~np~igY~QGm~~ 216 (423)
.+ ...+.+....+|+.|+.||||+..+|+.+ +-.+.|..||.+|+.+.|++||+|||.+
T Consensus 346 ------------~~--------sa~~re~sv~~i~LDisrTfpsl~iFqk~GPy~d~L~~lL~AYt~yRpDvgYVqgmSF 405 (586)
T KOG2223|consen 346 ------------SN--------SAADREASVELIKLDISRTFPSLSIFQKGGPYHDDLHSLLGAYTCYRPDVGYVQGMSF 405 (586)
T ss_pred ------------cc--------chhhhhcchhheeechhccCcceeeeccCCchHHHHHHHhhhheeecCccccccchHH
Confidence 00 01122345789999999999999999875 6789999999999999999999999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHh-hhcccCCCChhhHHHHHHHHHHHHHHHCHHHHHHHHhCCCCccchHHHHHHHh
Q 014498 217 ICSPMIVLLENEADAFWCFEHTMRRL-RENFRTNTGMIGVQSQLSTLSQIIRTIDPKLHQHLEDLDGGEYLFAFRMLMVL 295 (423)
Q Consensus 217 iaa~ll~~~~~E~~aF~~f~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~lL~~~dP~L~~hL~~~~i~~~~f~~~W~~tl 295 (423)
|+|++++.+ ++.+||.+|.+|+++- ..-|+. -.-..+...+..|+..+++..|+|+.||.++++.|.+|++.|+.++
T Consensus 406 IaAvLllnm-d~~~AFiafANLLdkp~q~Aff~-~d~s~m~~yf~tfe~~leenlp~L~~Hl~kl~l~PDiylidwiftl 483 (586)
T KOG2223|consen 406 IAAVLLLNM-DLADAFIAFANLLDKPCQQAFFR-VDHSSMLSYFATFEVFLEENLPKLFTHLKKLELTPDIYLIDWIFTL 483 (586)
T ss_pred HHHHHHHcC-CcHHHHHHHHHHhccHHHHHHHh-cCcHHHHHHHHHHHHHHHhccHHHHHHHHhccCCCchhhHHHHHHH
Confidence 999999998 8899999999999983 333332 2234788899999999999999999999999999999999999999
Q ss_pred hcccCChhhHHHHHHHHhccccCCCchhhhcccCCCCCCcccchhHhhhhchhhhhhhhcCCCCCCchHHHHHHHHHHHH
Q 014498 296 FRREFSFVDALYLWELMWAMEYNPNIFSLYESNSSTSDGRQVNDKQLKQCGKFERKNVKTGLPDKTSALSVFLVASVLET 375 (423)
Q Consensus 296 F~~~l~~~~vlriWD~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ail~~ 375 (423)
|+..+|++..+||||+|+-+|. +|++..+++||..
T Consensus 484 yskslpldlacRIwDvy~rdge---------------------------------------------eFlfr~~lgIlkl 518 (586)
T KOG2223|consen 484 YSKSLPLDLACRIWDVYCRDGE---------------------------------------------EFLFRTALGILKL 518 (586)
T ss_pred HhccCChHHhhhhhheeeecch---------------------------------------------HHHHHHHHHHHHH
Confidence 9999999999999999998874 3677789999999
Q ss_pred HHHHHHHhcCChHHHHHHHhhhcCCCCHHHHHHHHHHHHHH
Q 014498 376 KNKKLLREAKGLDDVVKILADITGNLDAKKACNEALKIQKK 416 (423)
Q Consensus 376 ~r~~il~~~~~~~~il~~l~~l~~~~d~~~~l~~A~~l~~~ 416 (423)
.+++++. +|+..+.+++..++..+..++++..-..+..+
T Consensus 519 yepkLl~--mDf~~~~qfLtklp~dL~~eelF~~i~~~~~~ 557 (586)
T KOG2223|consen 519 YEPKLLV--MDFIHVAQFLTKLPEDLTPEELFMHIAYIQMQ 557 (586)
T ss_pred ccchHhh--hhHHHHHHHHHhCcccCCHHHHHHHHHHHhhh
Confidence 9999998 79999999999999999998888766655544
No 7
>KOG2197 consensus Ypt/Rab-specific GTPase-activating protein GYP7 and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=6e-36 Score=305.11 Aligned_cols=355 Identities=39% Similarity=0.723 Sum_probs=291.1
Q ss_pred CCCCCCCCCcccccccCCCCCCHHHHHHhhccCCCcc-HHHHHHHHHhCCCCCCChHHHHHHhhCCCCCCCCHHHHHHHH
Q 014498 21 RPECQADVPKVRFKARAGKTLSARRWHAAFSEDGHLD-IAKVLRRIQRGGIHPSIKGLVWEFLLGCYDPNSTFEERNQIR 99 (423)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~l~~~~W~~~l~~~~~i~-~~kll~~l~~~GIP~~~R~~vW~~LLg~~~~~~~~~~~~~i~ 99 (423)
++.|. ..+.....+....+++-++|...|..++... ..++++.+..+||+|.+|+.+|.+|+|+|+.+.+.+++..+.
T Consensus 29 ~~~~~-~~~~~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~l~~i~~~gi~psir~evw~fll~~y~~~~~~~~~~~~r 107 (488)
T KOG2197|consen 29 REPCL-SQSRIWVLIKPGKTLKPEKWQANFDPDGRLSGFVKLLKLIILGGIDPSIRGEVWEFLLGCYDLDSTFEERNQLR 107 (488)
T ss_pred ccccc-ccCCcceeeccccccchhhhhhccCCCccccchhhhheeeecCCCCCcccchhHHHHhcccCCCCchHHHHHHH
Confidence 34444 3344666777788888999999999988875 677889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhccccCCC-cccccccccCCCCcc-------------CCCCcc---------------------
Q 014498 100 QQRRQQYAAWKTECQNIVPIIGSG-KFITAAIVTDDGQSL-------------QDSNRD--------------------- 144 (423)
Q Consensus 100 ~~~~~~Y~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-------------~~p~~~--------------------- 144 (423)
..++.+|..|...+..+.+..+.+ ...+.....+...|. ..+...
T Consensus 108 ~~~~~~~~~l~~~c~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~~~ 187 (488)
T KOG2197|consen 108 VARRPQYNELLLVCQMMKSTVGNGLSYVVSSVVSDNRSPSLTLEEYNSNAMREGRLDESVHQRERIFSGGLSKSLRAEVW 187 (488)
T ss_pred hhcccchHHHHHHcchhhhhhccccceeeeEEeecCCCCcchhhhhhhhhhhccccccchhhhheecccccccchhhhhh
Confidence 999999999999998887766655 333333332222221 000000
Q ss_pred ---ccCCCCCCCCc----------cchHHHHH--------------HHHHHhHHhhccccCCCCCcCCCChhh--HHHHH
Q 014498 145 ---SLDQGWHVDGA----------ISDKKVLQ--------------WMLGLHQIGLDVVRTDRSLVFYESETN--QAKLW 195 (423)
Q Consensus 145 ---~~~~~~~~~~~----------~~~~~~~~--------------~~~~~~qI~~Dv~Rt~~~~~~f~~~~~--~~~L~ 195 (423)
..-..|..... -......+ +......|.+||.||.+.+.++....+ ...|.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~qW~~~~~~~~~~~~~~~~~~~~i~~dv~rtDr~~~~~~~~~n~~~~~l~ 267 (488)
T KOG2197|consen 188 KFLLDYSPWDSTTRERVSLRKLTDEYFRLKLQWSSTSPEQSPESEGYLERKSRIEKDVGRTDRSLEFYEGEENPHLARLV 267 (488)
T ss_pred hhhhcccCcccccccccccccccccHhhhhhhheeccccccccccchhhhhhhhhhhccccchhhhhhhcccccCHHHHH
Confidence 00011111110 00111111 223456789999999999999998877 99999
Q ss_pred HHHHHHHHhcCCCcccCChhhHHHHHHHhcCCHHHHHHHHHHHHHHhhhcccCCCChhhHHHHHHHHHHHHHHHCHHHHH
Q 014498 196 DVLAIYSWVDNDIGYVQGMNDICSPMIVLLENEADAFWCFEHTMRRLRENFRTNTGMIGVQSQLSTLSQIIRTIDPKLHQ 275 (423)
Q Consensus 196 rIL~~y~~~np~igY~QGm~~iaa~ll~~~~~E~~aF~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~~dP~L~~ 275 (423)
.||.+|+.+++++||||||+++.+|++.++.+|.+|||||+.+|++...+|..+.. ++..++..+..+++..||.||.
T Consensus 268 ~iL~ty~~~~~d~GY~QgmSDllspi~~v~~de~~aFwcFv~fm~~~~~nF~~d~~--~~~~Ql~~~~~li~~~dp~l~~ 345 (488)
T KOG2197|consen 268 DILLTYAVYDFDLGYCQGMSDLLSPILIVMEDEVEAFWCFVGFMDRLRHNFRIDQS--GMQTQLAQLSSLIQELDPRLYQ 345 (488)
T ss_pred HHHhhcccccCccccccCchhhcCcceeeecCchHHHHHHHHHHHHHhhcCccccc--cHHHHhhhhhhhccccCHHHHh
Confidence 99999999999999999999999999999999999999999999999889976544 8999999999999999999999
Q ss_pred HHHhCCCCccchHHHHHHHhhcccCChhhHHHHHHHHhccccCCCchhhhcccCCCCCCcccchhHhhhhchhhhhhhhc
Q 014498 276 HLEDLDGGEYLFAFRMLMVLFRREFSFVDALYLWELMWAMEYNPNIFSLYESNSSTSDGRQVNDKQLKQCGKFERKNVKT 355 (423)
Q Consensus 276 hL~~~~i~~~~f~~~W~~tlF~~~l~~~~vlriWD~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (423)
||++.+.+...||++|++.+|.++|..++++++|+++++.-+.+
T Consensus 346 hLe~~d~~~~~f~fr~l~v~frrEf~~ed~l~LWEvlw~~~~~~------------------------------------ 389 (488)
T KOG2197|consen 346 HLEKLDAGDLFFCFRMLLVPFRREFEFEDSLRLWEVLWTDLPSP------------------------------------ 389 (488)
T ss_pred hccccCCCccceeeehhhcccccccccccHHHHHHHHHhcCccc------------------------------------
Confidence 99999999999999999999999999999999999999975543
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhhh
Q 014498 356 GLPDKTSALSVFLVASVLETKNKKLLREAKGLDDVVKILADITGNLDAKKACNEALKIQKKYLSKS 421 (423)
Q Consensus 356 ~~~~~~~~~~l~~~~ail~~~r~~il~~~~~~~~il~~l~~l~~~~d~~~~l~~A~~l~~~~~~~~ 421 (423)
.|++|++.|++....+.|+.+..+++++++.++.+....|...++..|..++.++....
T Consensus 390 -------~f~~~~~~~~l~~~~~~l~~~~~~~~e~l~~i~~~~~~~d~~~~~~~A~~~~~~~k~~~ 448 (488)
T KOG2197|consen 390 -------HFHLYVAPAILNKDPQTLMEQGKSFNEVLKHVNLLSEKADVLWVLVRAEALERQNKQME 448 (488)
T ss_pred -------hHHHHHHHhhhhcchHHHHhcCccchhHHhhcccccccchhhhHHHHHHHHHHHHHhcc
Confidence 48999999999999999999999999999999999999999999999999998876654
No 8
>COG5210 GTPase-activating protein [General function prediction only]
Probab=100.00 E-value=2.4e-34 Score=298.29 Aligned_cols=240 Identities=29% Similarity=0.504 Sum_probs=198.7
Q ss_pred CHHHHHHhhccCCC-c---cHHHHHHHHHhCCCCCCChHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 014498 42 SARRWHAAFSEDGH-L---DIAKVLRRIQRGGIHPSIKGLVWEFLLGCYDPNSTFEERNQIRQQRRQQYAAWKTECQNIV 117 (423)
Q Consensus 42 ~~~~W~~~l~~~~~-i---~~~kll~~l~~~GIP~~~R~~vW~~LLg~~~~~~~~~~~~~i~~~~~~~Y~~l~~~~~~~~ 117 (423)
....|.+.+..++. . ...+ ++.+.+.|||+.+|+.||..++|+.+... .....|..+.+.+....
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~gip~~~r~~vw~~~~~~~~~~~----------~~~~~y~~~~~~~~~~~ 250 (496)
T COG5210 182 ADKLWISYLDPNPLSFLPVQLSK-LRELIRKGIPNELRGDVWEFLLGIGFDLD----------KNPGLYERLLNLHREAK 250 (496)
T ss_pred HHHHHHHHHhcccchhhhhhHHH-HHHHHHhcCChHhhhhhHHHHhccchhhc----------cCchHHHHHHHHHHhcC
Confidence 34578888877655 2 3334 67777889999999999999999976544 23456666655443210
Q ss_pred cccCCCcccccccccCCCCccCCCCccccCCCCCCCCccchHHHHHHHHHHhHHhhccccCCCCCcCCCChhhHHH--HH
Q 014498 118 PIIGSGKFITAAIVTDDGQSLQDSNRDSLDQGWHVDGAISDKKVLQWMLGLHQIGLDVVRTDRSLVFYESETNQAK--LW 195 (423)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~qI~~Dv~Rt~~~~~~f~~~~~~~~--L~ 195 (423)
. | . ....++|++||.||+|.+..|+.+..... |+
T Consensus 251 ~----------------------~-----------------~-----~~~~~~i~~Dl~rt~~~~~~f~~~~s~~~~~L~ 286 (496)
T COG5210 251 I----------------------P-----------------T-----QEIISQIEKDLSRTFPDNSLFQTEISIRAENLR 286 (496)
T ss_pred C----------------------C-----------------c-----HHHHHHHHccccccccccccccCcccccHHHHH
Confidence 0 0 0 02578999999999999999988766655 99
Q ss_pred HHHHHHHHhcCCCcccCChhhHHHHHHHhcCCHHHHHHHHHHHHHH--hhhcccCCCChhhHHHHHHHHHHHHHHHCHHH
Q 014498 196 DVLAIYSWVDNDIGYVQGMNDICSPMIVLLENEADAFWCFEHTMRR--LRENFRTNTGMIGVQSQLSTLSQIIRTIDPKL 273 (423)
Q Consensus 196 rIL~~y~~~np~igY~QGm~~iaa~ll~~~~~E~~aF~~f~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~lL~~~dP~L 273 (423)
|||.+|+.+||++||||||++|+|+|++++..|++|||||+.||+. +...| ..++.|+..++..+..+++..+|+|
T Consensus 287 rvL~ays~~~p~vgY~QgMn~l~a~ll~~~~~Ee~AF~~l~~L~~~~~l~~~~--~~~~~G~~~~~~~l~~~v~~~~p~l 364 (496)
T COG5210 287 RVLKAYSLYNPEVGYVQGMNFLAAPLLLVLESEEQAFWCLVKLLKNYGLPGYF--LKNLSGLHRDLKVLDDLVEELDPEL 364 (496)
T ss_pred HHHHHHHhcCCCCceeccHHHHHHHHHHHhhhhHHHHHHHHHHHHhccchhhc--ccCCcHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999997799999999999994 34444 4567899999999999999999999
Q ss_pred HHHHHhCCCCccchHHHHHHHhhcccCChhhHHHHHHHHhccccCCCchhhhcccCCCCCCcccchhHhhhhchhhhhhh
Q 014498 274 HQHLEDLDGGEYLFAFRMLMVLFRREFSFVDALYLWELMWAMEYNPNIFSLYESNSSTSDGRQVNDKQLKQCGKFERKNV 353 (423)
Q Consensus 274 ~~hL~~~~i~~~~f~~~W~~tlF~~~l~~~~vlriWD~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (423)
|+||...++....|+++||+|+|.+++|++.++||||++|++|..
T Consensus 365 ~~hl~~~~~~~~~~~~~w~l~lF~~~~p~e~~lriwD~lf~eg~~----------------------------------- 409 (496)
T COG5210 365 YEHLLREGVVLLMFAFRWFLTLFVREFPLEYALRIWDCLFLEGSS----------------------------------- 409 (496)
T ss_pred HHHHHHcCCchhhhhHHHHHHHHHhcCCHHHHHHHHHHHHHhccH-----------------------------------
Confidence 999999999999999999999999999999999999999998854
Q ss_pred hcCCCCCCchHHHHHHHHHHHHHHHHHHHh
Q 014498 354 KTGLPDKTSALSVFLVASVLETKNKKLLRE 383 (423)
Q Consensus 354 ~~~~~~~~~~~~l~~~~ail~~~r~~il~~ 383 (423)
+.+.+++|++...+.+++..
T Consensus 410 ----------~l~~~~~~~l~~~~~~l~~~ 429 (496)
T COG5210 410 ----------MLFQLALAILKLLRDKLLKL 429 (496)
T ss_pred ----------HHHHHHHHHHHhhhhhhhcc
Confidence 45567788888889998873
No 9
>PF00566 RabGAP-TBC: Rab-GTPase-TBC domain; InterPro: IPR000195 Identification of a TBC domain in GYP6_YEAST and GYP7_YEAST, which are GTPase activator proteins of yeast Ypt6 and Ypt7, imply that these domains are GTPase activator proteins of Rab-like small GTPases [].; GO: 0005097 Rab GTPase activator activity, 0032313 regulation of Rab GTPase activity, 0005622 intracellular; PDB: 2G77_A 1FKM_A 3HZJ_A 3QYE_A 2QFZ_A 3QYB_A 2QQ8_A 3DZX_A 3QWL_A.
Probab=100.00 E-value=1.4e-33 Score=261.21 Aligned_cols=169 Identities=31% Similarity=0.603 Sum_probs=148.1
Q ss_pred HHhHHhhccccCCCCCcCCCChhhHHHHHHHHHHHHHhcCCCcccCChhhHHHHHHHhcCCHHHHHHHHHHHHHHhhhcc
Q 014498 167 GLHQIGLDVVRTDRSLVFYESETNQAKLWDVLAIYSWVDNDIGYVQGMNDICSPMIVLLENEADAFWCFEHTMRRLRENF 246 (423)
Q Consensus 167 ~~~qI~~Dv~Rt~~~~~~f~~~~~~~~L~rIL~~y~~~np~igY~QGm~~iaa~ll~~~~~E~~aF~~f~~l~~~~~~~~ 246 (423)
..++|++|+.||+++...+..+..++.|.+||.+|+.++|++||+|||++|++++++++.+|++|||||++++......+
T Consensus 46 ~~~~I~~Dv~rt~~~~~~~~~~~~~~~l~~iL~~~~~~~~~~~Y~qG~~~i~~~ll~~~~~e~~af~~~~~l~~~~~~~~ 125 (214)
T PF00566_consen 46 IFEQIDKDVNRTFPNSFLFKNEQNQKSLERILSAYAKYNPDVGYCQGMNDIAAPLLLVFLDEEEAFWCFVQLLNYYLPDF 125 (214)
T ss_dssp CHHHHHHHHCTSSTSCCCSTTHHHHHHHHHHHHHHHHHTTTTSS-TTHHHHHHHHHHTCSHHHHHHHHHHHHHTHHGGGG
T ss_pred HHHHHHHhhhhhcccchhhhhcchHHHHHHHHHHhccccccccccchhhhhhhhhhhhcccccchhccccchhccccccc
Confidence 36899999999999778888899999999999999999999999999999999999888899999999999994433334
Q ss_pred cCCCChhhHHHHHHHHHHHHHHHCHHHHHHHHhCCCCccchHHHHHHHhhcccCChhhHHHHHHHHhccccCCCchhhhc
Q 014498 247 RTNTGMIGVQSQLSTLSQIIRTIDPKLHQHLEDLDGGEYLFAFRMLMVLFRREFSFVDALYLWELMWAMEYNPNIFSLYE 326 (423)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~lL~~~dP~L~~hL~~~~i~~~~f~~~W~~tlF~~~l~~~~vlriWD~~~~~~~~~~~f~~~~ 326 (423)
+ .++..++...+..++.+++.++|+|++||.+.++++..|+.+|+.|+|++.+|.+.++|||| ++.+|+..
T Consensus 126 ~-~~~~~~~~~~~~~~~~ll~~~~P~l~~~l~~~~~~~~~~~~~w~~~lF~~~l~~~~~~~lwD-~l~~g~~~------- 196 (214)
T PF00566_consen 126 F-QPNFKGLQKILKIFEQLLKKHDPELYNHLKQLGVDPEIYAFPWFLTLFSRSLPFDDVLRLWD-FLLEGYKF------- 196 (214)
T ss_dssp T-STTHHHHHHHHHHHHHHHHHHTHHHHHHHHHTT-GGHHHHHHHHHTTTTTTS-HHHHHHHHH-HHHHCTTH-------
T ss_pred c-cccccccchhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhHhhcCCcCCHHHHHHHHH-HHHcCCCc-------
Confidence 3 34556899999999999999999999999999999999999999999999999999999999 66565421
Q ss_pred ccCCCCCCcccchhHhhhhchhhhhhhhcCCCCCCchHHHHHHHHHHHHHHHHHH
Q 014498 327 SNSSTSDGRQVNDKQLKQCGKFERKNVKTGLPDKTSALSVFLVASVLETKNKKLL 381 (423)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ail~~~r~~il 381 (423)
+++++++|++...|++||
T Consensus 197 -------------------------------------~l~~~~lail~~~~~~il 214 (214)
T PF00566_consen 197 -------------------------------------FLFFIALAILKYLRDQIL 214 (214)
T ss_dssp -------------------------------------HHHHHHHHHHHHTHHHHH
T ss_pred -------------------------------------HHHHHHHHHHHHHHHHhC
Confidence 378899999999999987
No 10
>KOG1091 consensus Ypt/Rab-specific GTPase-activating protein GYP6 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=2.8e-31 Score=263.18 Aligned_cols=299 Identities=22% Similarity=0.336 Sum_probs=226.2
Q ss_pred CCCHHHHHHhhccCCCccHHHHHHHHHhCCCCCCChHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 014498 40 TLSARRWHAAFSEDGHLDIAKVLRRIQRGGIHPSIKGLVWEFLLGCYDPNSTFEERNQIRQQRRQQYAAWKTECQNIVPI 119 (423)
Q Consensus 40 ~l~~~~W~~~l~~~~~i~~~kll~~l~~~GIP~~~R~~vW~~LLg~~~~~~~~~~~~~i~~~~~~~Y~~l~~~~~~~~~~ 119 (423)
.+.+..|...+.. |.+- -...|+.+|+++||++|.+.+. |..-..+.+..|..++..+. +.|+
T Consensus 9 ~~~~~~w~~~l~~-gdlr-------------~s~~Rgv~Wrl~L~vLp~~~ss--~id~~~~~ra~~r~~r~~~L-~dPh 71 (625)
T KOG1091|consen 9 LLQRGEWSGLLYN-GDLR-------------FSNLRGVRWRLLLGVLPSENSS--WIDNLRRLRANYRRLRRRLL-IDPH 71 (625)
T ss_pred hhcchhhhhhccc-cchh-------------hhhhhhHHHHHhheecCCCchh--HHHHHHHHhhhhhccccccc-cCcc
Confidence 3455678777654 2111 2458999999999999998754 34444566677776644432 2222
Q ss_pred cCCCcccccccccCCCCccCCCCccccCCCCCCCCccchHHHHHHHHHHhHHhhccccCCCCC-cCCCChhhHHHHHHHH
Q 014498 120 IGSGKFITAAIVTDDGQSLQDSNRDSLDQGWHVDGAISDKKVLQWMLGLHQIGLDVVRTDRSL-VFYESETNQAKLWDVL 198 (423)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~qI~~Dv~Rt~~~~-~~f~~~~~~~~L~rIL 198 (423)
.-.+ . .....+.++|++..+.+.|+ +.+...+....|+.||.||||++ .+|+.+..+..|++||
T Consensus 72 ~~k~------~-~s~d~~idnPLSq~~~S~W~--------rfF~d~EL~~~i~qDvsRtfPe~~~fFqs~~~q~mLr~iL 136 (625)
T KOG1091|consen 72 NLKE------N-HSPDLPIDNPLSQNPQSVWN--------RFFRDAELEKTIDQDVSRTFPEHSLFFQSPEVQGMLRRIL 136 (625)
T ss_pred cccc------c-cCCCcccCCccccCCCchhh--------hhcCcHHHHHhhcchhhccCcchhhhhcCchhhHHHHHHH
Confidence 2110 0 12345677898888888874 33444466889999999999999 8999999999999999
Q ss_pred HHHHHhcCCCcccCChhhHHHHHHHhcCC-------------------H-----------HHHH--HHHHHHHHHhhhcc
Q 014498 199 AIYSWVDNDIGYVQGMNDICSPMIVLLEN-------------------E-----------ADAF--WCFEHTMRRLRENF 246 (423)
Q Consensus 199 ~~y~~~np~igY~QGm~~iaa~ll~~~~~-------------------E-----------~~aF--~~f~~l~~~~~~~~ 246 (423)
..|+..||++||-||||++.||++++... | .+++ -+++.+|.....+|
T Consensus 137 l~~~lehp~i~YrQGMHElLAPl~fVl~~D~q~l~h~se~~~~~l~f~E~d~iy~~~y~k~d~dn~~lqs~lmls~~~~~ 216 (625)
T KOG1091|consen 137 LLYALEHPEIGYRQGMHELLAPLLFVLHVDNQALLHVSESLFDKLGFEERDVIYNFLYLKTDLDNTELQSVLMLSDEYGY 216 (625)
T ss_pred HHHHhhchhhhHHhhhhhhhhhhhhheehhHHHHHHHHHhhhhhcCcchhhhhhhHHHHhhhccchhHHHHHHhhhcccc
Confidence 99999999999999999999999998731 2 2222 24445543321111
Q ss_pred c-------------------C---CCChhhHHHHHHHHHHHHHHHCHHHHHHHHhCCCCccchHHHHHHHhhcccCChhh
Q 014498 247 R-------------------T---NTGMIGVQSQLSTLSQIIRTIDPKLHQHLEDLDGGEYLFAFRMLMVLFRREFSFVD 304 (423)
Q Consensus 247 ~-------------------~---~~~~~~~~~~~~~~~~lL~~~dP~L~~hL~~~~i~~~~f~~~W~~tlF~~~l~~~~ 304 (423)
. + ..+.+.+......+..+|...|+.|+.||.+.+|+|++|.+||+..||.|+||+.+
T Consensus 217 e~e~g~~~~e~~ie~day~~~d~l~~~l~~v~e~~~~~~~lL~~~D~~Lh~HL~~l~i~pqifgiRWlRlLFGREfpL~d 296 (625)
T KOG1091|consen 217 EEELGIVLSEKLIEHDAYVMFDALMPGLPPVFEANFAQYHLLAKVDKSLHSHLVELGIEPQIFGIRWLRLLFGREFPLQD 296 (625)
T ss_pred ccCcceecCcccCCcCcccchhhhcccchhHHHHhhhhhhhhhhccHHHHHHHHhcCCchHHHHHHHHHHHHcchhHHHH
Confidence 0 0 13344566777888999999999999999999999999999999999999999999
Q ss_pred HHHHHH-HHhccccCCCchhhhcccCCCCCCcccchhHhhhhchhhhhhhhcCCCCCCchHHHHHHHHHHHHHHHHHHHh
Q 014498 305 ALYLWE-LMWAMEYNPNIFSLYESNSSTSDGRQVNDKQLKQCGKFERKNVKTGLPDKTSALSVFLVASVLETKNKKLLRE 383 (423)
Q Consensus 305 vlriWD-~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ail~~~r~~il~~ 383 (423)
++.+|| +++++.+.. .++-+++++||...|+.++..
T Consensus 297 LLiVWD~~l~~d~pr~-------------------------------------------~Lv~~m~VsmLL~IRd~Llss 333 (625)
T KOG1091|consen 297 LLIVWDHVLIFDSPRG-------------------------------------------ILVACMFVSMLLYIRDSLLSS 333 (625)
T ss_pred HHHHhhhhhhccCchH-------------------------------------------HHHHHHHHHHHHHHHHHHHHh
Confidence 999999 777654432 268889999999999999994
Q ss_pred cCChHHHHHHHhhhcCCCCHHHHHHHHHHHHH
Q 014498 384 AKGLDDVVKILADITGNLDAKKACNEALKIQK 415 (423)
Q Consensus 384 ~~~~~~il~~l~~l~~~~d~~~~l~~A~~l~~ 415 (423)
+....++++-+.|..+|+++++.+|..+..
T Consensus 334 --~~~tcL~~Lm~yP~~~Dv~~~iekAl~l~~ 363 (625)
T KOG1091|consen 334 --EYQTCLQYLMNYPEIIDVDKFIEKALHLQK 363 (625)
T ss_pred --cchhHHHHHhcCCCcCcHHHHHHHHHHHHH
Confidence 455599999999999999999999998875
No 11
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=99.97 E-value=3.2e-31 Score=262.72 Aligned_cols=201 Identities=22% Similarity=0.338 Sum_probs=186.4
Q ss_pred HhHHhhccccCCCCCcCCCChhhHHHHHHHHHHHHHhcCCCcccCChhhHHHHHHHhc-CCHHHHHHHHHHHHHHhhhcc
Q 014498 168 LHQIGLDVVRTDRSLVFYESETNQAKLWDVLAIYSWVDNDIGYVQGMNDICSPMIVLL-ENEADAFWCFEHTMRRLRENF 246 (423)
Q Consensus 168 ~~qI~~Dv~Rt~~~~~~f~~~~~~~~L~rIL~~y~~~np~igY~QGm~~iaa~ll~~~-~~E~~aF~~f~~l~~~~~~~~ 246 (423)
.+||+.|++|++....+.+.+.+.+.|+|+|.+|+..+|...|.||+..+|+||++.. ++|..||-|+..++-++..+|
T Consensus 391 drqievdiprchQyd~~lsSp~~~r~lrRvLkawv~~s~~fvywqgldsLa~PFl~ln~Nne~laF~~~~~fi~kycq~f 470 (725)
T KOG1093|consen 391 DRQIEVDIPRCHQYDELLSSPKGHRKLRRVLKAWVTWSPIFVYWQGLDSLAAPFLYLNFNNELLAFACIATFIPKYCQHF 470 (725)
T ss_pred hhhhhcccchhhhcccccCCHHHHHHHHHHHHHHHhcCcceeecCCChhhhhhHHHHhcCchHHHHHHHHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999999875 679999999999998876665
Q ss_pred cCCCChhhHHHHHHHHHHHHHHHCHHHHHHHHhCCCCccchHHHHHHHhhcccCChhhHHHHHHHHhccccCCCchhhhc
Q 014498 247 RTNTGMIGVQSQLSTLSQIIRTIDPKLHQHLEDLDGGEYLFAFRMLMVLFRREFSFVDALYLWELMWAMEYNPNIFSLYE 326 (423)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~lL~~~dP~L~~hL~~~~i~~~~f~~~W~~tlF~~~l~~~~vlriWD~~~~~~~~~~~f~~~~ 326 (423)
+-.++...++..+.+|.+++..+||+|++||..+|+.+++|+++||+|+|+++||++.++.+||-++..+.
T Consensus 471 flkdns~vikeyLs~f~~l~AfhDpeL~qHl~~~~f~~eLyAiPwflT~Fshvlpl~kil~LwD~lml~~~--------- 541 (725)
T KOG1093|consen 471 FLKDNSNVIKEYLSMFSQLLAFHDPELLQHLIDIGFIPELYAIPWFLTMFSHVLPLHKILHLWDNLMLGHS--------- 541 (725)
T ss_pred HhhcCchhHHHHHHHHHHHHHhcCHHHHHHHHHcCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHhcCCC---------
Confidence 54555668899999999999999999999999999999999999999999999999999999999998653
Q ss_pred ccCCCCCCcccchhHhhhhchhhhhhhhcCCCCCCchHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHhhhcCCCCHHHH
Q 014498 327 SNSSTSDGRQVNDKQLKQCGKFERKNVKTGLPDKTSALSVFLVASVLETKNKKLLREAKGLDDVVKILADITGNLDAKKA 406 (423)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ail~~~r~~il~~~~~~~~il~~l~~l~~~~d~~~~ 406 (423)
.|.+++++|++...|+.+|. .++.|.+.++.+++ ++|++.+
T Consensus 542 ------------------------------------SFplmi~vAil~~lR~~LLa--~nfne~illf~d~p-dldId~~ 582 (725)
T KOG1093|consen 542 ------------------------------------SFPLMIGVAILIQLRDPLLA--CNFNECILLFSDLP-DLDIDVC 582 (725)
T ss_pred ------------------------------------ccHHHHHHHHHHHhhhhhhh--CCchhheeeeccCC-cccHHHH
Confidence 37999999999999999999 48999999999999 9999999
Q ss_pred HHHHHHHHHH
Q 014498 407 CNEALKIQKK 416 (423)
Q Consensus 407 l~~A~~l~~~ 416 (423)
+.+...+++.
T Consensus 583 Ires~~l~e~ 592 (725)
T KOG1093|consen 583 IRESYHLMET 592 (725)
T ss_pred HHHHhhhhhC
Confidence 9999998864
No 12
>KOG2222 consensus Uncharacterized conserved protein, contains TBC, SH3 and RUN domains [Signal transduction mechanisms; General function prediction only]
Probab=99.97 E-value=6.1e-31 Score=255.05 Aligned_cols=250 Identities=23% Similarity=0.411 Sum_probs=208.8
Q ss_pred HHHHHHHHHhCCCCCCChHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCcccccccccCCCCc
Q 014498 58 IAKVLRRIQRGGIHPSIKGLVWEFLLGCYDPNSTFEERNQIRQQRRQQYAAWKTECQNIVPIIGSGKFITAAIVTDDGQS 137 (423)
Q Consensus 58 ~~kll~~l~~~GIP~~~R~~vW~~LLg~~~~~~~~~~~~~i~~~~~~~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (423)
.+++...+..||||..+|+..|+.|.|.+...+ ...-.|++..+++..-.
T Consensus 159 tdk~~~llkeggiphslr~~lw~rlsga~~kkk----------~ae~sy~~ilk~~andk-------------------- 208 (848)
T KOG2222|consen 159 TDKFEELLKEGGIPHSLRAFLWMRLSGALAKKK----------DAETSYEDILKACANDK-------------------- 208 (848)
T ss_pred hHHHHHHHHcCCCCcchhHHHHHHhhhhhhhhc----------cccccHHHHHHHhcccc--------------------
Confidence 456555667788999999999999999864332 22346888777763210
Q ss_pred cCCCCccccCCCCCCCCccchHHHHHHHHHHhHHhhccccCCCCCcCCCCh--hhHHHHHHHHHHHHHhcCCCcccCChh
Q 014498 138 LQDSNRDSLDQGWHVDGAISDKKVLQWMLGLHQIGLDVVRTDRSLVFYESE--TNQAKLWDVLAIYSWVDNDIGYVQGMN 215 (423)
Q Consensus 138 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~qI~~Dv~Rt~~~~~~f~~~--~~~~~L~rIL~~y~~~np~igY~QGm~ 215 (423)
| .+-.||++|+-|+.|++..|.+. ++...|+|||.+.++..|++||||||.
T Consensus 209 ---~------------------------~~~~qiekdllr~lpnn~cf~k~n~~gi~~lrrilk~ia~ifpdigycqg~g 261 (848)
T KOG2222|consen 209 ---L------------------------MIGKQIEKDLLRILPNNACFSKKNGEGIEALRRILKCIAFIFPDIGYCQGMG 261 (848)
T ss_pred ---c------------------------chhHHHHHHHHHhCCCcceeeCCCCcchHHHHHHHhhheeecCCcccccCcc
Confidence 0 23579999999999999999774 679999999999999999999999999
Q ss_pred hHHHHHHHhcCCHHHHHHHHHHHHHHhh-hcccCCCChhhHHHHHHHHHHHHHHHCHHHHHHHHhCCCCccchHHHHHHH
Q 014498 216 DICSPMIVLLENEADAFWCFEHTMRRLR-ENFRTNTGMIGVQSQLSTLSQIIRTIDPKLHQHLEDLDGGEYLFAFRMLMV 294 (423)
Q Consensus 216 ~iaa~ll~~~~~E~~aF~~f~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~lL~~~dP~L~~hL~~~~i~~~~f~~~W~~t 294 (423)
-|+|.+|+.+ .|+.|||++.++++.+. .+|+ ..++-|++..-.+...|+.-+.|.|-+.|..++|+.++.+..||+|
T Consensus 262 viva~lllf~-~ee~afwmmaaiiedilp~nfy-sqtllgiqaderv~~~li~~~l~~ldeal~~~dielslitl~w~lt 339 (848)
T KOG2222|consen 262 VIVACLLLFC-EEENAFWMMAAIIEDILPANFY-SQTLLGIQADERVMHHLIACHLPDLDEALEDHDIELSLITLHWFLT 339 (848)
T ss_pred HHHHHHHHHh-cchhHHHHHHHHHHHhcCchhh-hhhHhccchhHHHHHHHHHhccCchhHHHHhccceeeehHHHHHHH
Confidence 9999999888 78899999999999865 4555 5678899999999999999999999999999999999999999999
Q ss_pred hhcccCChhhHHHHHHHHhccccCCCchhhhcccCCCCCCcccchhHhhhhchhhhhhhhcCCCCCCchHHHH-HHHHHH
Q 014498 295 LFRREFSFVDALYLWELMWAMEYNPNIFSLYESNSSTSDGRQVNDKQLKQCGKFERKNVKTGLPDKTSALSVF-LVASVL 373 (423)
Q Consensus 295 lF~~~l~~~~vlriWD~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~ail 373 (423)
+|+..+....++||||.||.+|.. .+| +.+.||
T Consensus 340 lf~nv~~~killriwd~~fy~g~i----------------------------------------------~ifql~i~il 373 (848)
T KOG2222|consen 340 LFANVFHMKILLRIWDFFFYEGGI----------------------------------------------NIFQLIIGIL 373 (848)
T ss_pred HHHHHHHHHHHHHHHHhheecCcc----------------------------------------------hhHHHHHHHH
Confidence 999999999999999999987642 444 777888
Q ss_pred HHHHHHHHH---hcCChHHHHHHHhhhcCCC-CHHHHHHHHHH
Q 014498 374 ETKNKKLLR---EAKGLDDVVKILADITGNL-DAKKACNEALK 412 (423)
Q Consensus 374 ~~~r~~il~---~~~~~~~il~~l~~l~~~~-d~~~~l~~A~~ 412 (423)
....+.|.. ...+..+|+..++++|... |+++++..|..
T Consensus 374 kmkeqdi~~iaettensa~if~als~ip~~vtdve~l~~~~~~ 416 (848)
T KOG2222|consen 374 KMKEQDIKEIAETTENSADIFNALSDIPAEVTDVEKLFEQAGE 416 (848)
T ss_pred HhhHHHHHHHHHhcccHHHHHHHHHhCCchhhhHHHHHHHHhh
Confidence 877777653 2356778889999999665 89999888754
No 13
>KOG4347 consensus GTPase-activating protein VRP [General function prediction only]
Probab=99.96 E-value=3.9e-29 Score=252.09 Aligned_cols=249 Identities=18% Similarity=0.339 Sum_probs=210.5
Q ss_pred HHHHHhhccCCC-cc---HHHHHHHHHhCCCCCCChHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 014498 44 RRWHAAFSEDGH-LD---IAKVLRRIQRGGIHPSIKGLVWEFLLGCYDPNSTFEERNQIRQQRRQQYAAWKTECQNIVPI 119 (423)
Q Consensus 44 ~~W~~~l~~~~~-i~---~~kll~~l~~~GIP~~~R~~vW~~LLg~~~~~~~~~~~~~i~~~~~~~Y~~l~~~~~~~~~~ 119 (423)
+.|.+.|...|. ++ ..+ ++++.+.|+|...|+++|.++.|.. .-+..+...|.++.+....
T Consensus 174 k~W~~~f~~~G~~~~~~qt~~-~~Klv~~gipe~~rgeiW~l~sGav----------~~~l~~~Geygkll~~~~G---- 238 (671)
T KOG4347|consen 174 KFWKKYFIKDGPNMNQIQTIL-LRKLLYNGFPEDPRGEIWYLASGAV----------ASLLLNPGEYGKLLHSVTG---- 238 (671)
T ss_pred HHHHHHHHHhcccccHHHHHH-HHHHHHHhcCCChHHHHHHhhhHHH----------HHhhcCcHHhhhhhhcccC----
Confidence 359999988665 34 333 6777788999999999999999973 2345567888887776421
Q ss_pred cCCCcccccccccCCCCccCCCCccccCCCCCCCCccchHHHHHHHHHHhHHhhccccCCCCCcCCCChhhHHHHHHHHH
Q 014498 120 IGSGKFITAAIVTDDGQSLQDSNRDSLDQGWHVDGAISDKKVLQWMLGLHQIGLDVVRTDRSLVFYESETNQAKLWDVLA 199 (423)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~qI~~Dv~Rt~~~~~~f~~~~~~~~L~rIL~ 199 (423)
+ .......|++|+.|..|+++-|+.+.+...|+|||.
T Consensus 239 ---------------------~----------------------~~~a~eEIE~Dl~rsLpEhpA~Q~e~gi~aLR~vL~ 275 (671)
T KOG4347|consen 239 ---------------------K----------------------RSVATEEIEPDLGRSLPEHPAFQSEPGIAALRRVLT 275 (671)
T ss_pred ---------------------C----------------------cccccccccCCCCCCCCcchhhhCCCchhhHHHHHH
Confidence 0 002356799999999999999999999999999999
Q ss_pred HHHHhcCCCcccCChhhHHHHHHHhcCCHHHHHHHHHHHHHHhhhcccCCCChhhHHHHHHHHHHHHHHHCHHHHHHHHh
Q 014498 200 IYSWVDNDIGYVQGMNDICSPMIVLLENEADAFWCFEHTMRRLRENFRTNTGMIGVQSQLSTLSQIIRTIDPKLHQHLED 279 (423)
Q Consensus 200 ~y~~~np~igY~QGm~~iaa~ll~~~~~E~~aF~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~~dP~L~~hL~~ 279 (423)
+|++.||+|||||-||-+++.+++.+ .|+++||+++.+.+.+.+.|+ ..+..|......+++.+++...|.||.|+..
T Consensus 276 Aya~~Np~vGYcQaMNIV~s~lll~~-~EEeafwll~~lce~~ip~yy-s~~vvGtliDQ~vfe~lve~~lP~l~~~~~~ 353 (671)
T KOG4347|consen 276 AYAWSNPEVGYCQAMNIVGSELLLFC-KEEEAFWLLSKLCEIYIPDYY-SKTVVGTLIDQSVFEELVEDTLPVLGEHLAV 353 (671)
T ss_pred hhhccCCchhHHHHHHHHHHhhhhhh-ccchHHHHHHHHHHHhccccc-chhhhhhHHHHHHHHHHHHHhhhHHHHHhhh
Confidence 99999999999999999999988888 789999999999999888887 4567788999999999999999999999999
Q ss_pred CCCCccchHHHHHHHhhcccCChhhHHHHHHHHhccccCCCchhhhcccCCCCCCcccchhHhhhhchhhhhhhhcCCCC
Q 014498 280 LDGGEYLFAFRMLMVLFRREFSFVDALYLWELMWAMEYNPNIFSLYESNSSTSDGRQVNDKQLKQCGKFERKNVKTGLPD 359 (423)
Q Consensus 280 ~~i~~~~f~~~W~~tlF~~~l~~~~vlriWD~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (423)
.+ ...+...+||+|+|...+|++..+||-|+||.+|..
T Consensus 354 l~-~l~~Vsl~WFlslFls~m~le~a~~ilD~FF~eG~r----------------------------------------- 391 (671)
T KOG4347|consen 354 LG-QLSTVSLSWFLSLFLSLMPLEYAVRILDCFFYEGPR----------------------------------------- 391 (671)
T ss_pred hc-ccceEeeHHHHHHHHHHcchHHHHHHHhhhhhcccH-----------------------------------------
Confidence 99 566889999999999999999999999999998753
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHhhhcC
Q 014498 360 KTSALSVFLVASVLETKNKKLLREAKGLDDVVKILADITG 399 (423)
Q Consensus 360 ~~~~~~l~~~~ail~~~r~~il~~~~~~~~il~~l~~l~~ 399 (423)
.++-+++||+..+.++|+.+ .|..+++..+.+...
T Consensus 392 ----vlFqiaLail~~N~~~il~~-~dDge~~~vl~~y~~ 426 (671)
T KOG4347|consen 392 ----VLFQIALAILKQNAERILSA-TDDGEAMMVLGNYFD 426 (671)
T ss_pred ----HHHHHHHHHHHhhHHHhccc-CCchHHHHHHHHHHH
Confidence 24449999999999999994 677777776665443
No 14
>KOG2595 consensus Predicted GTPase activator protein [Signal transduction mechanisms]
Probab=99.96 E-value=2.9e-28 Score=228.86 Aligned_cols=203 Identities=20% Similarity=0.258 Sum_probs=179.3
Q ss_pred HhHHhhccccCCCCCcC----CCChhhHHHHHHHHHHHHHhcCCCcccCChhhHHHHHHHhcCCHHHHHHHHHHHHHHhh
Q 014498 168 LHQIGLDVVRTDRSLVF----YESETNQAKLWDVLAIYSWVDNDIGYVQGMNDICSPMIVLLENEADAFWCFEHTMRRLR 243 (423)
Q Consensus 168 ~~qI~~Dv~Rt~~~~~~----f~~~~~~~~L~rIL~~y~~~np~igY~QGm~~iaa~ll~~~~~E~~aF~~f~~l~~~~~ 243 (423)
.+|+..||.|++...+. -.....++.|..++......||++.|.||.||||.+|++++ .|.+|+-++..|-....
T Consensus 97 ~nQV~LDv~RSl~rfppg~p~~~R~~Lq~qL~~LI~rVl~~yP~L~YYQGyHDI~~tfLLv~-gE~~Al~l~E~L~~~~l 175 (395)
T KOG2595|consen 97 YNQVILDVERSLGRFPPGIPKELRLQLQKQLTELILRVLRKYPTLNYYQGYHDIVVTFLLVV-GELEALSLMEELSTLHL 175 (395)
T ss_pred cceEEEehhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCcchhcchhHHHHHHHHhh-hhHhhhHHHHHHHHHHH
Confidence 57999999999955442 22234567777777777789999999999999999999999 69999999999987766
Q ss_pred hcccCCCChhhHHHHHHHHHHHHHHHCHHHHHHHHhCCCCccchHHHHHHHhhcccC-ChhhHHHHHHHHhccccCCCch
Q 014498 244 ENFRTNTGMIGVQSQLSTLSQIIRTIDPKLHQHLEDLDGGEYLFAFRMLMVLFRREF-SFVDALYLWELMWAMEYNPNIF 322 (423)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~lL~~~dP~L~~hL~~~~i~~~~f~~~W~~tlF~~~l-~~~~vlriWD~~~~~~~~~~~f 322 (423)
.+|. .+++.+....+..+..+++..+|+||+.|.+.++++ +|+.+|++|||+|.+ ++..++|++|+|++.++-
T Consensus 176 rdfM-~~Tld~t~~qL~~i~~iIk~~nP~Ly~~l~~aevgt-lFaLsWllTWFaH~L~~~~~vvRlfD~Flas~pl---- 249 (395)
T KOG2595|consen 176 RDFM-LPTLDFTVRQLRLISPIIKEVNPELYQFLQSAEVGT-LFALSWLLTWFAHNLKDIRIVVRLFDFFLASHPL---- 249 (395)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHhhcChHHHHHHHhhcccc-eehhhHHHHHHhhcchhHHHHHHHHHHHHhcCcc----
Confidence 7776 477889999999999999999999999999998877 999999999999999 999999999999997542
Q ss_pred hhhcccCCCCCCcccchhHhhhhchhhhhhhhcCCCCCCchHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHhhhcCCCC
Q 014498 323 SLYESNSSTSDGRQVNDKQLKQCGKFERKNVKTGLPDKTSALSVFLVASVLETKNKKLLREAKGLDDVVKILADITGNLD 402 (423)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ail~~~r~~il~~~~~~~~il~~l~~l~~~~d 402 (423)
..+|++++++...|++|+++..++.-+..++..+|..+.
T Consensus 250 -----------------------------------------~piyv~A~vvL~r~~eIl~~~~dms~~H~lLs~iPq~lp 288 (395)
T KOG2595|consen 250 -----------------------------------------LPIYVYAAVVLYRRSEILKCDCDMSLLHGLLSTIPQDLP 288 (395)
T ss_pred -----------------------------------------hhHHHHHHHhhhhHHHHHHHHhhhHHHHHHHHhCccccC
Confidence 479999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 014498 403 AKKACNEALKIQKKYL 418 (423)
Q Consensus 403 ~~~~l~~A~~l~~~~~ 418 (423)
.+.+++.+..++.++.
T Consensus 289 ~d~lik~s~~~i~~~~ 304 (395)
T KOG2595|consen 289 YDTLIKESVLLITRKP 304 (395)
T ss_pred HHHHHHHHHHHHhcCC
Confidence 9999999988876654
No 15
>KOG4436 consensus Predicted GTPase activator NB4S/EVI5 (contains TBC domain)/Calmodulin-binding protein Pollux (contains PTB and TBC domains) [General function prediction only]
Probab=99.95 E-value=2.8e-26 Score=234.72 Aligned_cols=254 Identities=21% Similarity=0.367 Sum_probs=206.0
Q ss_pred HHHHHhhcc---CCCccHHHHHHHHHhCCCCCCChHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 014498 44 RRWHAAFSE---DGHLDIAKVLRRIQRGGIHPSIKGLVWEFLLGCYDPNSTFEERNQIRQQRRQQYAAWKTECQNIVPII 120 (423)
Q Consensus 44 ~~W~~~l~~---~~~i~~~kll~~l~~~GIP~~~R~~vW~~LLg~~~~~~~~~~~~~i~~~~~~~Y~~l~~~~~~~~~~~ 120 (423)
..|++++.. ....|++.+. ...+.|+|..-|+.+|.+|.--+ . +.+. .+
T Consensus 550 ~~wek~~e~~~~~~k~d~ed~~-~~l~~gvprsrrgeiwtflA~q~----------~-----------~~~~----l~-- 601 (948)
T KOG4436|consen 550 ETWEKILERTRIKIKKDMEDLH-SALRTGVPRSRRGEIWTFLAEQH----------S-----------LNHA----LP-- 601 (948)
T ss_pred HHHHHHHHHhhhcccccHHHHH-HHHHccCchhhhHHHHHHHHHHH----------H-----------Hhcc----CC--
Confidence 369999877 2334677644 44577999999999999997310 0 0000 00
Q ss_pred CCCcccccccccCCCCccCCCCccccCCCCCCCCccchHHHHHHHHHHhHHhhccccCCCCCcCCCCh--hhHHHHHHHH
Q 014498 121 GSGKFITAAIVTDDGQSLQDSNRDSLDQGWHVDGAISDKKVLQWMLGLHQIGLDVVRTDRSLVFYESE--TNQAKLWDVL 198 (423)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~qI~~Dv~Rt~~~~~~f~~~--~~~~~L~rIL 198 (423)
+...+. +-...+.+.++++..+.|-.|+-||||+|++|+.. .++..+.|+|
T Consensus 602 ------------~~kr~~---------------~~p~~~llkqLte~qhAi~idlgrtfp~h~~~~~qlg~gqlsl~n~L 654 (948)
T KOG4436|consen 602 ------------DKKRPP---------------DFPYKELLKQLTEQQHAILIDLGRTFPTHPYFSDQLGLGQLSLFNLL 654 (948)
T ss_pred ------------cccCCC---------------CCChHHHHHHHHHHHHHHHHhhccccCCCHHHHhhccccHHHHHHHH
Confidence 000000 11114456678888999999999999999999885 6799999999
Q ss_pred HHHHHhcCCCcccCChhhHHHHHHHhcCCHHHHHHHHHHHHHHh--hhcccCCCChhhHHHHHHHHHHHHHHHCHHHHHH
Q 014498 199 AIYSWVDNDIGYVQGMNDICSPMIVLLENEADAFWCFEHTMRRL--RENFRTNTGMIGVQSQLSTLSQIIRTIDPKLHQH 276 (423)
Q Consensus 199 ~~y~~~np~igY~QGm~~iaa~ll~~~~~E~~aF~~f~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~lL~~~dP~L~~h 276 (423)
.+|+..+|++|||||...+|+++|+.+ +|+.||-++..||... +..|. +.+..++..++.+..+++.+.+.||+|
T Consensus 655 kayslld~e~gycqg~~fv~gvlllh~-~e~~afellk~LM~~r~~r~qy~--pdm~~lq~qmyqLsrl~hd~hrdlyn~ 731 (948)
T KOG4436|consen 655 KAYSLLDPEVGYCQGLSFVAGVLLLHM-SEENAFELLKFLMFDRGMRKQYR--PDMKKLQIQMYQLSRLLHDYHRDLYNH 731 (948)
T ss_pred HHhcccCccccccCcchhhhhhhHhhc-chhhHHHHHHHHHHHHhhHhhhc--hHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 999999999999999999999999999 8999999999999764 44454 557788999999999999999999999
Q ss_pred HHhCCCCccchHHHHHHHhhcccCChhhHHHHHHHHhccccCCCchhhhcccCCCCCCcccchhHhhhhchhhhhhhhcC
Q 014498 277 LEDLDGGEYLFAFRMLMVLFRREFSFVDALYLWELMWAMEYNPNIFSLYESNSSTSDGRQVNDKQLKQCGKFERKNVKTG 356 (423)
Q Consensus 277 L~~~~i~~~~f~~~W~~tlF~~~l~~~~vlriWD~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (423)
|.+++|.|.+|+.+||+|.|+..||+..+.|++|.+|..|..
T Consensus 732 le~~ei~pslyAapw~lt~fasQf~lGfvarvfd~~flq~te-------------------------------------- 773 (948)
T KOG4436|consen 732 LEENEISPSLYAAPWFLTVFASQFPLGFVARVFDLIFLQGTE-------------------------------------- 773 (948)
T ss_pred HHhcccChHHhhhHHHHHHHHhhCcchHHHHHHHHHHhhccc--------------------------------------
Confidence 999999999999999999999999999999999999987643
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHhhhcCCC
Q 014498 357 LPDKTSALSVFLVASVLETKNKKLLREAKGLDDVVKILADITGNL 401 (423)
Q Consensus 357 ~~~~~~~~~l~~~~ail~~~r~~il~~~~~~~~il~~l~~l~~~~ 401 (423)
.++-+++++|..++..|++ +.++++|+.+++++...+
T Consensus 774 -------vifK~a~~llsv~k~~l~e-~dn~e~i~d~~k~~~p~~ 810 (948)
T KOG4436|consen 774 -------VIFKVALSLLSVHKQLLLE-KDNFEEIVDFLKTTLPKM 810 (948)
T ss_pred -------hhhhhHHHHHHhhHHHHHh-hhhHHHHHHHHHHhhhhh
Confidence 3455888999988888888 569999999999877555
No 16
>KOG1102 consensus Rab6 GTPase activator GAPCenA and related TBC domain proteins [General function prediction only]
Probab=99.90 E-value=8.6e-24 Score=212.18 Aligned_cols=185 Identities=24% Similarity=0.428 Sum_probs=162.4
Q ss_pred hHHhhccccCCCCCcCCCC--hhhHHHHHHHHHHHHHhcCCCcccCChhhHHHHHHHhcCCHHHHHHHHHHHHHHhhhcc
Q 014498 169 HQIGLDVVRTDRSLVFYES--ETNQAKLWDVLAIYSWVDNDIGYVQGMNDICSPMIVLLENEADAFWCFEHTMRRLRENF 246 (423)
Q Consensus 169 ~qI~~Dv~Rt~~~~~~f~~--~~~~~~L~rIL~~y~~~np~igY~QGm~~iaa~ll~~~~~E~~aF~~f~~l~~~~~~~~ 246 (423)
.+| +|+.||+|.+..|.. ..+++.|.+||.+|+.++|++||||||..++++++.++ .|++|||+++.+|......+
T Consensus 187 ~~~-~d~~Rt~~~~~~f~~~~~~~q~sl~~vl~a~s~~~~~~gy~q~m~~~a~~ll~~~-~ee~af~~lv~l~~~~~~~~ 264 (397)
T KOG1102|consen 187 EII-RDLSRTFPAHLLFRKRYGVGQRSLYNVLKAYSLYDPEVGYCQGMSSIAAPLLLYL-PEEEAFPLLVKLMKNYGLDL 264 (397)
T ss_pred HHH-hhccCcCcchhhhhhhcCcccccccccchhhcccCCCcccccchhhHhhhhhccC-chhhhhhhhhhhhhccchhc
Confidence 456 999999999998877 35689999999999999999999999999999999998 59999999999998764444
Q ss_pred cCCCChhhHHHHHHHHHHHHHHHCHHHHHHHHhCCCCccchHHHHHHHhhcccCChhhHHHHHHHHhccccCCCchhhhc
Q 014498 247 RTNTGMIGVQSQLSTLSQIIRTIDPKLHQHLEDLDGGEYLFAFRMLMVLFRREFSFVDALYLWELMWAMEYNPNIFSLYE 326 (423)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~lL~~~dP~L~~hL~~~~i~~~~f~~~W~~tlF~~~l~~~~vlriWD~~~~~~~~~~~f~~~~ 326 (423)
+ ..+..++...+..+..+++...|.++.|+...+++..+|+.+|++|+|+..+|++.+.|+||+++.+|..
T Consensus 265 ~-~~~~~~l~~~~~~~~~l~~~~~p~~~~~~~~~~~~~~~~~s~w~~t~f~~k~p~~~~~ri~d~~~~~g~~-------- 335 (397)
T KOG1102|consen 265 L-SPGFSGLQRSFRQLQRLLKELIPKLLDHLLPQGIELSMYASQWFLTLFAAKFPLELVLRIWDALFVEGVS-------- 335 (397)
T ss_pred c-cccCCchhhhHHHHHHHHHHhChhhhhhccccccccceeccceeeEeeeccccHHHHHHHhHHHHHhchH--------
Confidence 4 5667799999999999999999999999999999999999999999999999999999999999998721
Q ss_pred ccCCCCCCcccchhHhhhhchhhhhhhhcCCCCCCchHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHhhhc-CCCCH
Q 014498 327 SNSSTSDGRQVNDKQLKQCGKFERKNVKTGLPDKTSALSVFLVASVLETKNKKLLREAKGLDDVVKILADIT-GNLDA 403 (423)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ail~~~r~~il~~~~~~~~il~~l~~l~-~~~d~ 403 (423)
+...++++++....+.++. .+++.++.++.+.. ...|.
T Consensus 336 -------------------------------------i~~~~~~~l~~~~~~~~~~--~~~e~~~~~l~~~~~~~~~~ 374 (397)
T KOG1102|consen 336 -------------------------------------ILFRFSLALLKHKADDLLD--LDFESLLSYLRVDLPKSYDS 374 (397)
T ss_pred -------------------------------------HHHHHHHHHhhhhhHHHhh--ccHHHHHHHHhcccHhhcCc
Confidence 4566888899988888888 46999999988544 44443
No 17
>KOG2221 consensus PDZ-domain interacting protein EPI64, contains TBC domain [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.86 E-value=3.9e-22 Score=177.13 Aligned_cols=188 Identities=21% Similarity=0.412 Sum_probs=151.4
Q ss_pred HHHHHHhhccCCCccHH---HHHHHHHhCCCCCCChHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 014498 43 ARRWHAAFSEDGHLDIA---KVLRRIQRGGIHPSIKGLVWEFLLGCYDPNSTFEERNQIRQQRRQQYAAWKTECQNIVPI 119 (423)
Q Consensus 43 ~~~W~~~l~~~~~i~~~---kll~~l~~~GIP~~~R~~vW~~LLg~~~~~~~~~~~~~i~~~~~~~Y~~l~~~~~~~~~~ 119 (423)
+++|..++++... -++ +.++--|+.|||+++|+..|++|.|....-. .++..|..+..
T Consensus 75 eskwL~mldnw~~-~m~kk~~~ir~rcrkgippslr~Raw~ylsGa~~~~~----------~np~~~~~~~~-------- 135 (267)
T KOG2221|consen 75 ESKWLHMLDNWHE-EMRKKQKKIRPRCRKGIPPSLRGRAWRYLSGAPSPPP----------KNPVVFDELGP-------- 135 (267)
T ss_pred HHHHHHHHHHHHH-HHHhccccccchhhcCCCcccchhHHHhhcCCCCCCC----------CCcchhhhccC--------
Confidence 4578888776321 111 2355567889999999999999999854322 12333332211
Q ss_pred cCCCcccccccccCCCCccCCCCccccCCCCCCCCccchHHHHHHHHHHhHHhhccccCCCCCcCCCCh--hhHHHHHHH
Q 014498 120 IGSGKFITAAIVTDDGQSLQDSNRDSLDQGWHVDGAISDKKVLQWMLGLHQIGLDVVRTDRSLVFYESE--TNQAKLWDV 197 (423)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~qI~~Dv~Rt~~~~~~f~~~--~~~~~L~rI 197 (423)
...+|. ..+.|.+|+.|-||.|.+|... .++..|.|+
T Consensus 136 -----------------~pG~p~------------------------t~e~i~kdl~rqfp~hemf~s~~k~gkqelfr~ 174 (267)
T KOG2221|consen 136 -----------------APGDPK------------------------TAEGIHKDLHRQFPFHEMFGSSGKTGKQELFRV 174 (267)
T ss_pred -----------------CCCCCc------------------------chhhhccccccCCCcccccccccccchHHHHHH
Confidence 112222 3577999999999999999764 679999999
Q ss_pred HHHHHHhcCCCcccCChhhHHHHHHHhcCCHHHHHHHHHHHHHHhhhcccCCCChhhHHHHHHHHHHHHHHHCHHHHHHH
Q 014498 198 LAIYSWVDNDIGYVQGMNDICSPMIVLLENEADAFWCFEHTMRRLRENFRTNTGMIGVQSQLSTLSQIIRTIDPKLHQHL 277 (423)
Q Consensus 198 L~~y~~~np~igY~QGm~~iaa~ll~~~~~E~~aF~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~~dP~L~~hL 277 (423)
|.+|..++|+.||||+-.-|+++++..+ .+.++||||+.+.+.+.+.|+ ..++..++.+-.++..|+++.+|..|.||
T Consensus 175 lka~ti~~pe~g~cq~qapiaa~llmhm-p~rdaf~~~vqicekylqgy~-~sgleaiq~dg~il~~Llkk~~~p~~rH~ 252 (267)
T KOG2221|consen 175 LKAYTIYKPEEGYCQAQAPIAAVLLMHM-PARDAFWCFVQICEKYLQGYY-SSGLEAIQNDGGILEGLLKKASPPPYRHL 252 (267)
T ss_pred HHHHHHhCchhhhhhhhchHHHHHHhcc-cHHHHHHHHHHHHHHHccccc-ccchhhhhcccHHHHHHHHhcCCCCCccc
Confidence 9999999999999999999999999888 788999999999999877776 35678899999999999999999999999
Q ss_pred HhCCCCccchHHHHH
Q 014498 278 EDLDGGEYLFAFRML 292 (423)
Q Consensus 278 ~~~~i~~~~f~~~W~ 292 (423)
....+++.+|...||
T Consensus 253 ~~~kvdp~lym~ewF 267 (267)
T KOG2221|consen 253 GGDKVDPLLYMTEWF 267 (267)
T ss_pred ccCCCCHHHhhhccC
Confidence 999999999999997
No 18
>KOG3636 consensus Uncharacterized conserved protein, contains TBC and Rhodanese domains [General function prediction only]
Probab=99.70 E-value=3.2e-16 Score=152.26 Aligned_cols=177 Identities=18% Similarity=0.272 Sum_probs=142.8
Q ss_pred hHHHHHHHHHHHHHhcCCCcccC--ChhhHHHHHHHhcCCHHHHHHHHHHHHHHhhhcccCCCChhhHHHHHHHHHHHHH
Q 014498 190 NQAKLWDVLAIYSWVDNDIGYVQ--GMNDICSPMIVLLENEADAFWCFEHTMRRLRENFRTNTGMIGVQSQLSTLSQIIR 267 (423)
Q Consensus 190 ~~~~L~rIL~~y~~~np~igY~Q--Gm~~iaa~ll~~~~~E~~aF~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lL~ 267 (423)
....|..++.-|+... ++.|.. |.-.+.-|++++-.+..+.|-||.++++++-+.-.... ...+..|+-||+
T Consensus 91 vv~dlES~iTfYCK~R-n~~Y~~d~gWi~lL~pl~~L~lprsd~fN~F~ai~~kYIPkdcrpk-----g~~Fh~FRLLlq 164 (669)
T KOG3636|consen 91 VVSDLESFITFYCKKR-NMDYIKDIGWITLLEPLLLLNLPRSDEFNVFFAITTKYIPKDCRPK-----GQIFHLFRLLLQ 164 (669)
T ss_pred hhHhhhhHhhhhhhcc-CCcccccccHHHHHHHHHHhcCCcchhhhhhHhhhhcccCCCCCCC-----CccchHHHHHHH
Confidence 3457788888887632 345554 56678888888877889999999999988533322111 235788999999
Q ss_pred HHCHHHHHHHHhCCCCccchHHHHHHHhhcccCChhhHHHHHHHHhccccCCCchhhhcccCCCCCCcccchhHhhhhch
Q 014498 268 TIDPKLHQHLEDLDGGEYLFAFRMLMVLFRREFSFVDALYLWELMWAMEYNPNIFSLYESNSSTSDGRQVNDKQLKQCGK 347 (423)
Q Consensus 268 ~~dP~L~~hL~~~~i~~~~f~~~W~~tlF~~~l~~~~vlriWD~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (423)
.+||+|++||....|+|.+|+..||-+||+...+.+.+..+||.++-.+...
T Consensus 165 YHdPelc~~LdtkkitPd~Y~lnWf~sLFas~~Stev~~a~WdlY~qqaDPF---------------------------- 216 (669)
T KOG3636|consen 165 YHDPELCNHLDTKKITPDMYTLNWFASLFASSMSTEVCHALWDLYIQQADPF---------------------------- 216 (669)
T ss_pred hcCHHHhhhhhccccCchHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCce----------------------------
Confidence 9999999999999999999999999999999999999999999999875542
Q ss_pred hhhhhhhcCCCCCCchHHHHHHHHHHHHHHHHHHHh-cCChHHHHHHHhhhcCCC---CHHHHHHHHHHHHHH
Q 014498 348 FERKNVKTGLPDKTSALSVFLVASVLETKNKKLLRE-AKGLDDVVKILADITGNL---DAKKACNEALKIQKK 416 (423)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~l~~~~ail~~~r~~il~~-~~~~~~il~~l~~l~~~~---d~~~~l~~A~~l~~~ 416 (423)
+++|+++.+|...|++||+. ..+.+++++++.++|..+ |+..+++.|.....|
T Consensus 217 ----------------~vffLaliiLiNake~ILq~~sdsKEe~ikfLenmp~~L~~eDvpDffsLAqyY~~K 273 (669)
T KOG3636|consen 217 ----------------LVFFLALIILINAKEEILQVKSDSKEEAIKFLENMPAQLSVEDVPDFFSLAQYYSDK 273 (669)
T ss_pred ----------------ehHHHHHHHhcccHHHHhhhccccHHHHHHHHHcCchhcccccchhHHHHHHHHhhc
Confidence 46678889999999999953 356788999999999777 888889988766543
No 19
>KOG4436 consensus Predicted GTPase activator NB4S/EVI5 (contains TBC domain)/Calmodulin-binding protein Pollux (contains PTB and TBC domains) [General function prediction only]
Probab=99.53 E-value=1.9e-13 Score=141.28 Aligned_cols=201 Identities=17% Similarity=0.209 Sum_probs=167.3
Q ss_pred HHHHHHhCCCCCCChHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCcccccccccCCCCccCC
Q 014498 61 VLRRIQRGGIHPSIKGLVWEFLLGCYDPNSTFEERNQIRQQRRQQYAAWKTECQNIVPIIGSGKFITAAIVTDDGQSLQD 140 (423)
Q Consensus 61 ll~~l~~~GIP~~~R~~vW~~LLg~~~~~~~~~~~~~i~~~~~~~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (423)
.++..+.+|+|+..|..+|+.|+..- +. .+ ..-.+.|.++......
T Consensus 176 ~l~e~Ve~~~p~~frli~~qlLssat--d~-----~q--~~I~e~~sdl~~~s~~------------------------- 221 (948)
T KOG4436|consen 176 KLKELVEGGIPMHFRLIRWQLLSSAT--DR-----EQ--ALIFEDYSDLAPCSSQ------------------------- 221 (948)
T ss_pred hhHHHHhcCCchHHHHHHHHHhcccc--cc-----hh--hHHHHHHHHHhhhcch-------------------------
Confidence 46677899999999999999999752 22 11 1223566665443110
Q ss_pred CCccccCCCCCCCCccchHHHHHHHHHHhHHhhccccCCCCCcCCCChh---------hHHHHHHHHHHHHHhcCCCccc
Q 014498 141 SNRDSLDQGWHVDGAISDKKVLQWMLGLHQIGLDVVRTDRSLVFYESET---------NQAKLWDVLAIYSWVDNDIGYV 211 (423)
Q Consensus 141 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~qI~~Dv~Rt~~~~~~f~~~~---------~~~~L~rIL~~y~~~np~igY~ 211 (423)
.++ ..++--|..|+.||.|.+.+|.+.. .++.|+|+..+|+...-++|||
T Consensus 222 ----------------~Ek-----~~~~~~Irrdi~~~~~eh~~fke~~s~~~~~~~~~~d~LfN~~K~~~~~~~E~ifs 280 (948)
T KOG4436|consen 222 ----------------QEK-----ELHIGIIRRDIERTYPEHYFFKEQSSTVCSDIRFAQDQLFNVAKAYSTKDLEVIFS 280 (948)
T ss_pred ----------------hhh-----hHHHHHHHHHhhccCcceeeeccCccCCcchhHHHHHHHHHHHHHHhhhhhhhhhc
Confidence 011 1346689999999999999998742 4899999999999999999999
Q ss_pred CChhhHHHHHHHhcCCHHHHHHHHHHHHHHhhhcccCCCChhhHHHHHHHHHHHHHHHCH-HHHHHHHhCCCCccchHHH
Q 014498 212 QGMNDICSPMIVLLENEADAFWCFEHTMRRLRENFRTNTGMIGVQSQLSTLSQIIRTIDP-KLHQHLEDLDGGEYLFAFR 290 (423)
Q Consensus 212 QGm~~iaa~ll~~~~~E~~aF~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~~dP-~L~~hL~~~~i~~~~f~~~ 290 (423)
||=+.+++.+++++ +++.+|..++.+|..++..-.+++.+..+...+..++...+...| .|+.|+.+.+++..+|.-.
T Consensus 281 qGs~~m~Gll~l~~-~~E~assv~~~lm~~~rl~~l~kpe~~~l~~~~~q~e~~~q~~sp~dl~sH~~eq~~h~S~~~rs 359 (948)
T KOG4436|consen 281 QGSAFMVGLLLLQM-PVEEASSVKVQLMILYRLRELSKPEMEPLGLCMFQLECTNQDQSPMDLFSHFPEQHFHTSMYARS 359 (948)
T ss_pred cchHHHHHHHHhcC-cHHHHHHHHHHHHHhhcccccCCcccchhHHHHHhhcccccccchhHHhhcccccCCCccHHHHH
Confidence 99999999888887 788999999999998776666677787888889999999999999 9999999999999999999
Q ss_pred HHHHhhcccCChhhHHHHHHHHhcccc
Q 014498 291 MLMVLFRREFSFVDALYLWELMWAMEY 317 (423)
Q Consensus 291 W~~tlF~~~l~~~~vlriWD~~~~~~~ 317 (423)
||++.|...+|+....++.|++..+|.
T Consensus 360 ~flt~~ltt~Pi~~a~r~~~~f~~egl 386 (948)
T KOG4436|consen 360 WFLTNFLTTFPIFMAARISDTFSSEGL 386 (948)
T ss_pred HHHHhhcccCchhhccccccccccccH
Confidence 999999999999999999999998763
No 20
>KOG1648 consensus Uncharacterized conserved protein, contains RUN, BRK and TBC domains [General function prediction only]
Probab=99.37 E-value=3.5e-14 Score=139.51 Aligned_cols=278 Identities=23% Similarity=0.359 Sum_probs=206.5
Q ss_pred ccccccCCCCCCHHHHHHhhccCCCccHHHHHHHHHhCCCCCCChHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 014498 31 VRFKARAGKTLSARRWHAAFSEDGHLDIAKVLRRIQRGGIHPSIKGLVWEFLLGCYDPNSTFEERNQIRQQRRQQYAAWK 110 (423)
Q Consensus 31 ~~~~~~~~~~l~~~~W~~~l~~~~~i~~~kll~~l~~~GIP~~~R~~vW~~LLg~~~~~~~~~~~~~i~~~~~~~Y~~l~ 110 (423)
+.-+++++++++++-|.++..+ ..+..-.+++..++||+....|..+|+.+++.+...+...+-+.......+.|..-.
T Consensus 521 pD~pcda~~glt~~~W~qy~~d-~t~~e~~~l~~~~~g~~e~~~r~~~~p~~~~~~~~g~~~~~~d~~e~~~s~~y~~~l 599 (813)
T KOG1648|consen 521 PDDPCDASAGLTEKFWKQYRAD-PTIEEWRVLEAEVRGRDEEAFRAARAPKAASPVREGSCDVFEDPNEPTCSQHYDRNL 599 (813)
T ss_pred CCCCCCccccccHHHHHHHhcC-CchHHHHHHHHHHhcccHHHHhhcccccccccccccccchhcCCCccHHHHHHHHHH
Confidence 3445788899999999999654 456555678899999999999999999999988766554443444445556666543
Q ss_pred HHHhhhccccCCCcccccccccCCCCccCCCCccccCCCCCCCCccchHHHHHHHHHHhHHhhccccCCCCCcCCCChhh
Q 014498 111 TECQNIVPIIGSGKFITAAIVTDDGQSLQDSNRDSLDQGWHVDGAISDKKVLQWMLGLHQIGLDVVRTDRSLVFYESETN 190 (423)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~qI~~Dv~Rt~~~~~~f~~~~~ 190 (423)
-.+.. -..+.|++|+.|+..+..+|++..+
T Consensus 600 ~~~~~--------------------------------------------------~~~~~~~kd~e~~~~~~~~fs~~~~ 629 (813)
T KOG1648|consen 600 ITLFR--------------------------------------------------ANLHRIDKDVERCDRNLMFFSNKDN 629 (813)
T ss_pred HHHHh--------------------------------------------------hheeeecchhhhCcchheeecCCcc
Confidence 33322 2357899999999999999999988
Q ss_pred HHHHHHHHHHHHHhcCCCcccCChhhHHHHHHHhcCCHHHHHHHHHHHHHHhhhcccCCCChhhHHHHHHHHHHHHHHHC
Q 014498 191 QAKLWDVLAIYSWVDNDIGYVQGMNDICSPMIVLLENEADAFWCFEHTMRRLRENFRTNTGMIGVQSQLSTLSQIIRTID 270 (423)
Q Consensus 191 ~~~L~rIL~~y~~~np~igY~QGm~~iaa~ll~~~~~E~~aF~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~~d 270 (423)
.++ +++..+|...|-+-||.|||.++.+|++..+++|..+--||.-+|-.-+..|..- +++...+-.++ +++..+
T Consensus 630 les-~~~~~~~~~~~l~~~~~~~~~dl~~p~~~~~ed~~~~~e~~s~~~~~q~~~~~q~---~~~~~~l~~~r-~~~v~~ 704 (813)
T KOG1648|consen 630 LES-RRVMYTYVRRNLEEGYTQGMCDLLAPLLVTFEDEALTLECFSLLMLRQRGKFPQR---PGMSKCLLNLR-LIQVVD 704 (813)
T ss_pred hhh-heeeeeeeccccccccccchhhccCCcCCChhhcccccCCCcHHHHHhcccCCCC---CCccccccccc-chhhhc
Confidence 888 8889999999999999999999999999999988877778877777666655432 24444443333 666666
Q ss_pred HHHHHHHHhCCCCccchHHHHHHHhhcccCChhhHHHHHHHHhccccCCCchhhhcccCCCCCCcccchhHhhhhchhhh
Q 014498 271 PKLHQHLEDLDGGEYLFAFRMLMVLFRREFSFVDALYLWELMWAMEYNPNIFSLYESNSSTSDGRQVNDKQLKQCGKFER 350 (423)
Q Consensus 271 P~L~~hL~~~~i~~~~f~~~W~~tlF~~~l~~~~vlriWD~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (423)
| |-.-++. .+-..++||..-|.++++.+....+|..+++..-.-
T Consensus 705 ~-l~s~id~----~qa~~f~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~------------------------------- 748 (813)
T KOG1648|consen 705 P-LISDIDY----AQALSFRWFLLDFKRELSYECTYKVWEVIWAAQRLR------------------------------- 748 (813)
T ss_pred c-hhcchhh----hhhcceeeeccCcccccCCCCcceeeEeeccccccc-------------------------------
Confidence 6 2222221 223459999999999999999999999999753210
Q ss_pred hhhhcCCCCCCchHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHhhhcCCCCHHHHHHHH
Q 014498 351 KNVKTGLPDKTSALSVFLVASVLETKNKKLLREAKGLDDVVKILADITGNLDAKKACNEA 410 (423)
Q Consensus 351 ~~~~~~~~~~~~~~~l~~~~ail~~~r~~il~~~~~~~~il~~l~~l~~~~d~~~~l~~A 410 (423)
.+..|.+|+.++. -...+.++...-+..+++++++.+...-|-+.++.-|
T Consensus 749 ---------~~~~~~i~~g~~~-~~~~~~~~t~~~~~t~~i~~~~~~~e~~~c~r~~~~~ 798 (813)
T KOG1648|consen 749 ---------ITDDFAIFFGLAT-TNYHDVLITNNFDYTDMIKFFNEMAERHDCSRLLSSA 798 (813)
T ss_pred ---------cCcchhhhhhhHH-HhhHHHHhhcccchHHHHHHHHHHHhhhhhHHHHhcC
Confidence 1234788888887 4566677776778899999999988777777666554
No 21
>KOG2801 consensus Probable Rab-GAPs [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.70 E-value=3.7e-07 Score=85.51 Aligned_cols=181 Identities=12% Similarity=0.161 Sum_probs=133.8
Q ss_pred hhhHHHHHHHHHHHHHhcCCCcccCChhhHHHHHHHhcCCHHHHHHHHHHHHHHh-hhcccCCCChhhHHHHHHHHHHHH
Q 014498 188 ETNQAKLWDVLAIYSWVDNDIGYVQGMNDICSPMIVLLENEADAFWCFEHTMRRL-RENFRTNTGMIGVQSQLSTLSQII 266 (423)
Q Consensus 188 ~~~~~~L~rIL~~y~~~np~igY~QGm~~iaa~ll~~~~~E~~aF~~f~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~lL 266 (423)
..+....+.||.+.+...|+|++|..+..+++.++...-+|+++|---++++..- ...-..+.++......+..|..++
T Consensus 108 argegavrkilKOGanqfpdisfcpalpavvalllhysideaecfekacrilacndpgrrlidqsflafesscmtfgdlv 187 (559)
T KOG2801|consen 108 ARGEGAVRKILLCLANQFPDISFCPALPAVVALLLHYSIDEAECFEKACRILACNDPGRRLIDQSFLAFESSCMTFGDLV 187 (559)
T ss_pred CcCchhHHHHHHHHhccCCCcccCcchHHHHHHHHHhcccHHHHHHHhheeeeecCcchhhhhhHHHHHHhhhhhHHHHH
Confidence 4556678899999999999999999999999999888889999987776665431 111111334445666778888899
Q ss_pred HHHCHHHHHHHHhCCCCccchHHHHHHHhhcccCChhhHHHHHHHHhccccCCCchhhhcccCCCCCCcccchhHhhhhc
Q 014498 267 RTIDPKLHQHLEDLDGGEYLFAFRMLMVLFRREFSFVDALYLWELMWAMEYNPNIFSLYESNSSTSDGRQVNDKQLKQCG 346 (423)
Q Consensus 267 ~~~dP~L~~hL~~~~i~~~~f~~~W~~tlF~~~l~~~~vlriWD~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 346 (423)
.++.-.-++.+....-+.......|-.-+|. ++|+-...|++|+|+.+|+.
T Consensus 188 nkycqaahklmvavsedvlqvyadwqrwlfg-elplcyfarvfdvflvegyk---------------------------- 238 (559)
T KOG2801|consen 188 NKYCQAAHKLMVAVSEDVLQVYADWQRWLFG-ELPLCYFARVFDVFLVEGYK---------------------------- 238 (559)
T ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHhc-cchHHHHHHHhhheeecchH----------------------------
Confidence 8888877777765433333455677766664 58999999999999999864
Q ss_pred hhhhhhhhcCCCCCCchHHHH-HHHHHHHHHHHHH----HHhcCChHHHHHHHhhhcCCCCHHHHHHHHHHHHH
Q 014498 347 KFERKNVKTGLPDKTSALSVF-LVASVLETKNKKL----LREAKGLDDVVKILADITGNLDAKKACNEALKIQK 415 (423)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~l~-~~~ail~~~r~~i----l~~~~~~~~il~~l~~l~~~~d~~~~l~~A~~l~~ 415 (423)
++| +++|||....+.- ++.+.-..+|-.+..++.....+++++.+|..++-
T Consensus 239 ------------------vlyrvalailkffhkvragqplesdsvkqdirtfvrdiaktvspekllekafairl 294 (559)
T KOG2801|consen 239 ------------------VLYRVALAILKFFHKVRAGQPLESDSVKQDIRTFVRDIAKTVSPEKLLEKAFAIRL 294 (559)
T ss_pred ------------------HHHHHHHHHHHHHHHhhcCCCCccchHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Confidence 455 7788887655433 23333445677788899999999999999987764
No 22
>PF14961 BROMI: Broad-minded protein
Probab=97.04 E-value=0.024 Score=63.17 Aligned_cols=181 Identities=10% Similarity=0.131 Sum_probs=122.7
Q ss_pred HHHHHHHHHHhcCCCcccCChhhHHHHHHHhc-CCHHHHHHHHHHHHHHhhhcc-----------cCC----CCh-hhHH
Q 014498 194 LWDVLAIYSWVDNDIGYVQGMNDICSPMIVLL-ENEADAFWCFEHTMRRLRENF-----------RTN----TGM-IGVQ 256 (423)
Q Consensus 194 L~rIL~~y~~~np~igY~QGm~~iaa~ll~~~-~~E~~aF~~f~~l~~~~~~~~-----------~~~----~~~-~~~~ 256 (423)
-.+|+..|..+...-+|. |..-.|+.+++++ ++-+.+.-.+..+-..+...| ... .+. +-..
T Consensus 1086 ~l~~~~~~~~~~~~~~y~-g~DWFvstvfli~~Gd~e~~~~fL~~fS~ll~SaflW~pRlh~s~~l~~~~~~s~i~p~~~ 1164 (1296)
T PF14961_consen 1086 SLHILFEFIHFCLQGSYP-GHDWFVSTVFLIMLGDKERSLQFLQRFSRLLTSAFLWPPRLHASIHLPVDTAESGIHPVYF 1164 (1296)
T ss_pred hhHHHhhhhcccCCCCCC-CchhHHHHHHHHHcCChhHhHHHHHHHHHHHHHhHhccccccccccCCchhhhcCCCchhh
Confidence 334555554444443443 7776666666666 444444433333332221111 000 011 1112
Q ss_pred HHHHHHHHHHHHHCHHHHHHHHhCCCCccchHHHHHHHhhcccCChhhHHHHHHHHhccccCCCchhhhcccCCCCCCcc
Q 014498 257 SQLSTLSQIIRTIDPKLHQHLEDLDGGEYLFAFRMLMVLFRREFSFVDALYLWELMWAMEYNPNIFSLYESNSSTSDGRQ 336 (423)
Q Consensus 257 ~~~~~~~~lL~~~dP~L~~hL~~~~i~~~~f~~~W~~tlF~~~l~~~~vlriWD~~~~~~~~~~~f~~~~~~~~~~~~~~ 336 (423)
..+..++.+|+...|.+|.-|.-.|..+...|.+|+.-||=+.+++..++...=+.+..|+.
T Consensus 1165 ~~~~~vE~ll~~E~P~V~saf~~sg~tpsqi~~rW~~QcFWnyldW~eI~~y~~~cil~G~d------------------ 1226 (1296)
T PF14961_consen 1165 CSCHYVEMLLKAELPLVFSAFRMSGFTPSQICQRWLSQCFWNYLDWPEICHYIAICILYGPD------------------ 1226 (1296)
T ss_pred hHHHHHHHHHHhhccHHHHHHHHcCCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhcCcc------------------
Confidence 35688999999999999999999999999999999999999999999988777676766544
Q ss_pred cchhHhhhhchhhhhhhhcCCCCCCchHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHhhhc-CCCCHHHHHHHHHHHHH
Q 014498 337 VNDKQLKQCGKFERKNVKTGLPDKTSALSVFLVASVLETKNKKLLREAKGLDDVVKILADIT-GNLDAKKACNEALKIQK 415 (423)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ail~~~r~~il~~~~~~~~il~~l~~l~-~~~d~~~~l~~A~~l~~ 415 (423)
|.+|+|+|++...++.||++. .-.++..+++.-+ ....+..-+.-...|-.
T Consensus 1227 ---------------------------yqvY~~VailkHlq~~ilq~~-q~q~L~~flke~~l~gF~~~~~~~yM~~Le~ 1278 (1296)
T PF14961_consen 1227 ---------------------------YQVYICVAILKHLQPEILQHT-QTQDLQVFLKEEALRGFRVSDYLEYMENLEQ 1278 (1296)
T ss_pred ---------------------------ceeehhHHHHHHhhHHHHHhh-hhchHHHHhhhccccceeHHhHHHHHHHHHH
Confidence 679999999999999999864 3444566666433 45577777777888888
Q ss_pred HHHhhh
Q 014498 416 KYLSKS 421 (423)
Q Consensus 416 ~~~~~~ 421 (423)
+|+..+
T Consensus 1279 ~yR~~v 1284 (1296)
T PF14961_consen 1279 RYRPRV 1284 (1296)
T ss_pred HhHhHH
Confidence 887653
No 23
>KOG2224 consensus Uncharacterized conserved protein, contains TBC domain [Signal transduction mechanisms; General function prediction only]
Probab=85.51 E-value=0.29 Score=48.85 Aligned_cols=33 Identities=39% Similarity=0.976 Sum_probs=31.5
Q ss_pred CcccCChhhHHHHHHHhcCCHHHHHHHHHHHHH
Q 014498 208 IGYVQGMNDICSPMIVLLENEADAFWCFEHTMR 240 (423)
Q Consensus 208 igY~QGm~~iaa~ll~~~~~E~~aF~~f~~l~~ 240 (423)
+|-.|||++++||+|.-..+|.++||||+.||+
T Consensus 566 vglmqgmsdlvapilaevldesdtfwcfvglmq 598 (781)
T KOG2224|consen 566 VGLMQGMSDLVAPILAEVLDESDTFWCFVGLMQ 598 (781)
T ss_pred hhhhccchhhhhhHHHhhhccccchhhhhhhhc
Confidence 688899999999999999999999999999997
No 24
>KOG2197 consensus Ypt/Rab-specific GTPase-activating protein GYP7 and related proteins [Signal transduction mechanisms]
Probab=70.99 E-value=2.1 Score=44.73 Aligned_cols=76 Identities=28% Similarity=0.448 Sum_probs=60.7
Q ss_pred CCHHHHHHhhccCCCccHH-HHHHHHHhCCCCCCChHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 014498 41 LSARRWHAAFSEDGHLDIA-KVLRRIQRGGIHPSIKGLVWEFLLGCYDPNSTFEERNQIRQQRRQQYAAWKTECQNIV 117 (423)
Q Consensus 41 l~~~~W~~~l~~~~~i~~~-kll~~l~~~GIP~~~R~~vW~~LLg~~~~~~~~~~~~~i~~~~~~~Y~~l~~~~~~~~ 117 (423)
++.++|.....+++.++.. ........+|+-+.+|+.+|+.++++++.+.+..++...... ...|...+.+|....
T Consensus 148 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~k~qW~~~~ 224 (488)
T KOG2197|consen 148 LTLEEYNSNAMREGRLDESVHQRERIFSGGLSKSLRAEVWKFLLDYSPWDSTTRERVSLRKL-TDEYFRLKLQWSSTS 224 (488)
T ss_pred chhhhhhhhhhhccccccchhhhheecccccccchhhhhhhhhhcccCcccccccccccccc-cccHhhhhhhheecc
Confidence 7889999888777776432 223377788886699999999999999999998877777776 888999999986543
No 25
>PF10815 ComZ: ComZ; InterPro: IPR024558 ComZ, which contains a leucine zipper motif, negatively regulates transcription of the ComG operon [].
Probab=28.02 E-value=1e+02 Score=21.73 Aligned_cols=39 Identities=18% Similarity=0.173 Sum_probs=33.2
Q ss_pred HHHHHHHHCHHHHHHHHhCCCCccchHHHHHHHhhcccC
Q 014498 262 LSQIIRTIDPKLHQHLEDLDGGEYLFAFRMLMVLFRREF 300 (423)
Q Consensus 262 ~~~lL~~~dP~L~~hL~~~~i~~~~f~~~W~~tlF~~~l 300 (423)
|..+--++.|+--..|++.||+.+.-.++-|++||+++.
T Consensus 6 FmqIaMK~lPEak~~L~k~GIeLsme~~qP~m~L~~~VM 44 (56)
T PF10815_consen 6 FMQIAMKYLPEAKEELDKKGIELSMEMLQPLMQLLTKVM 44 (56)
T ss_pred HHHHHHHHhHHHHHHHHHcCccCCHHHHHHHHHHHHHHH
Confidence 455666788999999999999999989999999998764
No 26
>PF08109 Antimicrobial14: Lactocin 705 family; InterPro: IPR012517 This family consists of lactocin 705 which is a bacteriocin produced by Lactobacillus casei CRL 705. Lactocin 705 is a class IIb bacteriocin, whose activity depends upon the complementation of two peptides (705-alpha and 705-beta) of 33 amino acid residues each. Lactocin 705 is active against several Gram-positive bacteria, including food-borne pathogens and is a good candidate to be used for biopreservation of fermented meats [].
Probab=27.71 E-value=40 Score=20.07 Aligned_cols=15 Identities=33% Similarity=0.709 Sum_probs=11.0
Q ss_pred CcccCChhhHHHHHH
Q 014498 208 IGYVQGMNDICSPMI 222 (423)
Q Consensus 208 igY~QGm~~iaa~ll 222 (423)
-||+||+.+..--.|
T Consensus 3 sgyiqgipdflkgyl 17 (31)
T PF08109_consen 3 SGYIQGIPDFLKGYL 17 (31)
T ss_pred cccccccHHHHHHHH
Confidence 489999888765544
No 27
>PF08649 DASH_Dad1: DASH complex subunit Dad1; InterPro: IPR013958 The DASH complex is a ~10 subunit microtubule-binding complex that is transferred to the kinetochore prior to mitosis []. In Saccharomyces cerevisiae (Baker's yeast) DASH forms both rings and spiral structures on microtubules in vitro [, ]. Components of the DASH complex, including Dam1, Duo1, Spc34, Dad1 and Ask1, are essential and connect the centromere to the plus end of spindle microtubules []. Throughout the cell cycle Dad1 remains bound to kinetochores and its association is dependent on the Mis6 and Mal2 [].
Probab=25.34 E-value=1.7e+02 Score=21.14 Aligned_cols=50 Identities=12% Similarity=0.298 Sum_probs=31.5
Q ss_pred HHHHHHHHHH-hcCChHHHHHHHhhhcCCC----CHHHHHHHHHHHHHHHHhhhc
Q 014498 373 LETKNKKLLR-EAKGLDDVVKILADITGNL----DAKKACNEALKIQKKYLSKSK 422 (423)
Q Consensus 373 l~~~r~~il~-~~~~~~~il~~l~~l~~~~----d~~~~l~~A~~l~~~~~~~~~ 422 (423)
....|+.+++ ...++++++.-++.|...+ .+.+=...-..|+.+|.....
T Consensus 3 Fe~qR~~Li~eI~~~~e~vl~nlN~LNRsLE~~i~VGkEF~~V~~LW~~F~~~m~ 57 (58)
T PF08649_consen 3 FERQRDRLIQEISESMESVLNNLNALNRSLESVISVGKEFESVSSLWSQFYNGMA 57 (58)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHhc
Confidence 3567777773 3467888998888877653 222223344567777766554
No 28
>cd00978 chitosanase_glyco_hydro_46 Glycosyl hydrolase family 46 chitosanase domain. This family are composed of the chitosanase enzymes which hydrolyzes chitosan, a biopolymer of beta (1,4)-linked -D-glucosamine (GlcN) residues produced by partial or full deacetylation of chitin. Chitosanases play a role in defense against pathogens such as fungi and are found in microorganisms, fungi, viruses, and plants. Microbial chitosanases who members are the most prevalent can be divided into 3 subclasses based on the specificity of the cleavage positions for partial acetylated chitosan. Subclass I chitosanases such as N174 can split GlcN-GlcN and GlcNAc-GlcN linkages, whereas subclass II chitosanases such as Bacillus sp. no. 7-M can cleave only GlcN-GlcN linkages. Subclass III chitosanases such as MH-K1 chitosanase are the most versatile and can split both GlcN-GlcN and GlcN-GlcNAc linkages.
Probab=24.28 E-value=44 Score=31.02 Aligned_cols=68 Identities=16% Similarity=0.187 Sum_probs=42.3
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCHHHHHHhhccCCCccHHHHHHHHHhCCC-----CCCChHH
Q 014498 3 GILFHKYGGEDLDSYYPIRPECQADVPKVRFKARAGKTLSARRWHAAFSEDGHLDIAKVLRRIQRGGI-----HPSIKGL 77 (423)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~W~~~l~~~~~i~~~kll~~l~~~GI-----P~~~R~~ 77 (423)
+++|||. |.+..+|.++|......+- . +.+...++.|...|-+ .++.+.+.+- +..-|-.
T Consensus 143 t~v~HG~-~~d~~sf~~ir~ra~~~a~-----~-~~~g~dE~~~l~aF~~--------~R~~~l~~~~~~~~~~~~~Rv~ 207 (221)
T cd00978 143 TAVNHGP-GGDSDSFQGIRKRALKKAK-----T-PAQGGDEKTYLNAFLD--------VRTKVMKTEAANDPHNDTSRVD 207 (221)
T ss_pred hHhhhCC-CCCcchHHHHHHHHHHhcC-----C-CccCCCHHHHHHHHHH--------HHHHHHhcCccccCCCCccHHH
Confidence 4567885 5557888888665431111 1 1235788999988744 2444444342 3578999
Q ss_pred HHHHhhCC
Q 014498 78 VWEFLLGC 85 (423)
Q Consensus 78 vW~~LLg~ 85 (423)
+|+.||+-
T Consensus 208 a~r~~l~~ 215 (221)
T cd00978 208 AQRVFLNE 215 (221)
T ss_pred HHHHHHHc
Confidence 99999863
No 29
>KOG4631 consensus NADH:ubiquinone oxidoreductase, NDUFB3/B12 subunit [Energy production and conversion]
Probab=21.60 E-value=78 Score=24.92 Aligned_cols=26 Identities=15% Similarity=0.540 Sum_probs=21.4
Q ss_pred HHHHHHHHHhCCC-CCCChHHHHHHhh
Q 014498 58 IAKVLRRIQRGGI-HPSIKGLVWEFLL 83 (423)
Q Consensus 58 ~~kll~~l~~~GI-P~~~R~~vW~~LL 83 (423)
...+.+++.+.|+ +|-+|..||++.-
T Consensus 25 L~~~~k~La~~GLkDPW~RNevwrY~~ 51 (100)
T KOG4631|consen 25 LETIQKKLAAKGLKDPWGRNEVWRYMG 51 (100)
T ss_pred HHHHHHHHHHccccCchhcchhhhccC
Confidence 4456778888899 6889999999875
No 30
>KOG2141 consensus Protein involved in high osmolarity signaling pathway [Signal transduction mechanisms]
Probab=21.17 E-value=6.3e+02 Score=27.84 Aligned_cols=65 Identities=11% Similarity=0.053 Sum_probs=32.7
Q ss_pred HhHHhhccccCCCCCcCCCCh-hhHHHHHHHHHHHHHhcCCCcccCChhhHHHHHHHhcCCHHHHHHH
Q 014498 168 LHQIGLDVVRTDRSLVFYESE-TNQAKLWDVLAIYSWVDNDIGYVQGMNDICSPMIVLLENEADAFWC 234 (423)
Q Consensus 168 ~~qI~~Dv~Rt~~~~~~f~~~-~~~~~L~rIL~~y~~~np~igY~QGm~~iaa~ll~~~~~E~~aF~~ 234 (423)
+..|..++.+.+.+++-+... .....+.+++.++..... |.|+-...+++.+.....+|-.|+++
T Consensus 335 i~~I~~~i~~Ly~~~sr~~v~~sLtk~l~~~~~~~~~~ld--~~~~~y~AL~~~l~~~vg~eigahf~ 400 (822)
T KOG2141|consen 335 IIKIIAGIAELYMNNSRYDVTSSLTKLLLKALLGPFRLLD--SLLTTYAALAAMLHTMVGNEIGAHFL 400 (822)
T ss_pred HHHHHHHHHHHHHhcchhhHHHHHHHHHHHHhhhhHHHHH--HHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 456777777776544433222 222333344433332222 34444445666666666677666654
Done!