Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>014499
MTSISTCFTTTPKSRFFFTPLRPSINLKPPDSFPRIQPLPFPRISGKIPGSRVLVPVAKA
STDVAVGVGPGRIVESDKLPADVRNRAMDAVDACNRRVTIGDVAGKAGLKLNEAQKALQA
LAADTDGFLEVSDEGDVLYVFPNNYRAKLAAKSFRLKVEPVIDKAKAAAEYSIRVLFGTA
LIASIVIVFTAIIAILSSKSDDDDRGRRRRSFDSGFNIFISPSDLFWYWDPYYYRRRRVQ
TDDDDKKMNFIKSVFSFVFGEGDPNQGIEEKRWKLIGEYIASNGGVVTAEELAPYLDIDR
TMSDESYVLPVLLRFDGQPEIDEEGNILYRFPSFQRTAASQRIGRKEYVGRRWADAIGGV
EKIFREKKWEFSKTNMSERGMAIGLGGLNLFGVIILGAMLQEMAVTPNGFLKFVAYIFPL
LQL

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  014499
        (423 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2150560 - symbol:AT5G03900 "AT5G03900" species...  1193  2.8e-121  1


>TAIR|locus:2150560 [details] [associations]
            symbol:AT5G03900 "AT5G03900" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0009941 "chloroplast envelope" evidence=IDA]
            [GO:0009536 "plastid" evidence=IDA] GO:GO:0016021 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0009941 GO:GO:0031969 EMBL:AL162873
            EMBL:AB005235 PIR:T48417 EMBL:AK119134 EMBL:AY099567 EMBL:BT006578
            EMBL:AY084515 IPI:IPI00530468 IPI:IPI00546626 RefSeq:NP_568129.1
            RefSeq:NP_850761.1 UniGene:At.33208 STRING:Q8GW20 PaxDb:Q8GW20
            PRIDE:Q8GW20 EnsemblPlants:AT5G03900.2 GeneID:831927
            KEGG:ath:AT5G03900 TAIR:At5g03900 eggNOG:NOG05420
            HOGENOM:HOG000035852 InParanoid:Q8GW20 OMA:NLEERRW PhylomeDB:Q8GW20
            ProtClustDB:CLSN2689443 Genevestigator:Q8GW20 GermOnline:AT5G03900
            Uniprot:Q8GW20
        Length = 523

 Score = 1193 (425.0 bits), Expect = 2.8e-121, P = 2.8e-121
 Identities = 251/435 (57%), Positives = 311/435 (71%)

Query:     1 MTSISTCFTTTPK-SRFFFTPLRPS-INLKPP-D--SFPRIQPLPFPRISGKIPGSRVLV 55
             M  +STC   +P+ ++   +  +P  I L+ P D  SFPR+  L    +S +   +R  +
Sbjct:     1 MACVSTCLILSPRLTQVGLSSKKPFLIRLRSPVDRYSFPRM--LTERCLSTRRKFNRHGI 58

Query:    56 PVAKA-STDVAVG-VGPGRIVESDKLPADVRNRAMDAVDACNRRVTIGDVAGKAGLKLNE 113
              V KA S D   G + PG +VESDKLP DVR RAMDAVD C RRVT+GDVA + GLK+ E
Sbjct:    59 AVVKAASLDKVSGAIKPGGLVESDKLPTDVRKRAMDAVDECGRRVTVGDVASRGGLKVTE 118

Query:   114 AQKALQALAADTDGFLEVSDEGDVLYVFPNNYRAKLAAKSFRLKVEPVIDKAKAAAEYSI 173
             AQ ALQA+AADTDGFLEVSDEGDVLYVFP +YR KLAAKS R+++EP ++KAK A +Y  
Sbjct:   119 AQTALQAIAADTDGFLEVSDEGDVLYVFPRDYRTKLAAKSLRIQIEPFLEKAKGAVDYLA 178

Query:   174 RVLFGTALIASIVIVFTAIIAILXXXXXXXXXXXXXXXXXXXX-NIFISPSDLFWYWDPX 232
             RV FGTALIASIVIV+T+IIA+L                     N +I+P DL WYWDP 
Sbjct:   179 RVSFGTALIASIVIVYTSIIALLSSKSEDDNRQRRRGRSYDSGFNFYINPVDLLWYWDPN 238

Query:   233 XXXXXXVQTDDDDKKMNFIKSVFSFVFGEGDPNQGIEEKRWKLIGEYIASNGGVVTAEEL 292
                    + +D+ K MNFI+SVFSFVFG+GDPNQGIEE+RW++IG+YI S GGVV A+EL
Sbjct:   239 YYNRRRAR-EDEGKGMNFIESVFSFVFGDGDPNQGIEEERWQMIGQYITSRGGVVAADEL 297

Query:   293 APYLDIDRT---MSDESYVLPVLLRFDGQPEIDEEGNILYRFPSFQRTAA-SQRIGRKEY 348
             APYLD+  +   M+DESY+LPVLLRFDGQPE+DEEGNILY FPS QRTA+ S R  RKEY
Sbjct:   298 APYLDVPSSKSAMNDESYILPVLLRFDGQPELDEEGNILYCFPSLQRTASGSSR--RKEY 355

Query:   349 VGRRWADAIGGVEKIFREKKWEFSKTNMSERGMAIGLGGLNLFGVIILGAMLQEMAVTPN 408
             VG+ W D +  +EK F+EKKW+FSKT+ SER + IGLG +NLFGVI+L  +L EM+V P 
Sbjct:   356 VGK-WFDWVADMEKFFKEKKWQFSKTSTSERALVIGLGAVNLFGVIVLNTLLNEMSVRPG 414

Query:   409 GFLKFVAYIFPLLQL 423
             GFL FV  I+PLLQ+
Sbjct:   415 GFLTFVKNIYPLLQI 429


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.139   0.411    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      423       396   0.00096  117 3  11 22  0.37    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  596 (63 KB)
  Total size of DFA:  224 KB (2123 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  29.02u 0.16s 29.18t   Elapsed:  00:00:02
  Total cpu time:  29.02u 0.16s 29.18t   Elapsed:  00:00:02
  Start:  Sat May 11 01:34:02 2013   End:  Sat May 11 01:34:04 2013

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