Query 014503
Match_columns 423
No_of_seqs 371 out of 3094
Neff 6.6
Searched_HMMs 46136
Date Fri Mar 29 05:47:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014503.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014503hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02406 ethanolamine-phosphat 100.0 8.6E-94 1.9E-98 726.9 40.7 410 10-423 2-418 (418)
2 KOG2803 Choline phosphate cyti 100.0 2.3E-90 4.9E-95 662.5 25.4 348 63-419 6-357 (358)
3 PTZ00308 ethanolamine-phosphat 100.0 1.4E-79 3E-84 617.6 38.9 346 61-417 7-352 (353)
4 cd02173 ECT CTP:phosphoethanol 100.0 1.1E-38 2.3E-43 286.7 18.4 152 255-407 1-152 (152)
5 PLN02413 choline-phosphate cyt 100.0 5.3E-37 1.1E-41 295.0 18.7 154 252-408 23-178 (294)
6 cd02174 CCT CTP:phosphocholine 100.0 2.9E-36 6.4E-41 270.3 18.0 145 257-406 3-149 (150)
7 COG0615 TagD Cytidylyltransfer 100.0 4.2E-31 9.2E-36 231.1 12.8 132 257-394 2-139 (140)
8 KOG2803 Choline phosphate cyti 100.0 1.6E-31 3.5E-36 257.2 11.0 134 258-396 10-143 (358)
9 KOG2804 Phosphorylcholine tran 100.0 2.3E-31 5E-36 254.8 11.1 146 257-407 64-211 (348)
10 cd02174 CCT CTP:phosphocholine 100.0 2.3E-30 4.9E-35 232.2 16.6 138 65-206 2-141 (150)
11 PLN02413 choline-phosphate cyt 100.0 2.1E-29 4.5E-34 242.6 16.5 141 61-205 23-167 (294)
12 COG0615 TagD Cytidylyltransfer 100.0 1.4E-29 2.9E-34 221.6 13.5 131 66-202 2-139 (140)
13 PLN02406 ethanolamine-phosphat 100.0 2.2E-29 4.7E-34 256.5 16.9 135 255-394 52-190 (418)
14 cd02173 ECT CTP:phosphoethanol 100.0 8.8E-28 1.9E-32 216.0 16.6 135 65-203 2-140 (152)
15 KOG2804 Phosphorylcholine tran 100.0 2E-28 4.4E-33 234.6 10.6 140 62-205 60-201 (348)
16 PTZ00308 ethanolamine-phosphat 100.0 1.6E-27 3.5E-32 240.4 17.5 140 252-396 7-146 (353)
17 cd02172 RfaE_N N-terminal doma 99.9 1.2E-26 2.6E-31 206.9 16.8 134 65-203 4-142 (144)
18 cd02170 cytidylyltransferase c 99.9 2.2E-26 4.7E-31 202.8 16.4 133 65-202 1-135 (136)
19 COG2870 RfaE ADP-heptose synth 99.9 5.4E-27 1.2E-31 233.5 13.4 136 255-395 331-466 (467)
20 TIGR02199 rfaE_dom_II rfaE bif 99.9 4.2E-25 9E-30 197.0 15.7 130 65-201 11-143 (144)
21 TIGR02199 rfaE_dom_II rfaE bif 99.9 2.7E-24 5.9E-29 191.8 16.1 134 255-394 10-144 (144)
22 TIGR01518 g3p_cytidyltrns glyc 99.9 1.8E-24 4E-29 188.1 13.7 123 68-200 1-125 (125)
23 cd02171 G3P_Cytidylyltransfera 99.9 3.9E-24 8.5E-29 186.7 15.7 128 65-202 1-128 (129)
24 cd02172 RfaE_N N-terminal doma 99.9 2.2E-23 4.8E-28 185.9 16.1 138 255-396 3-143 (144)
25 PRK11316 bifunctional heptose 99.9 2.5E-23 5.4E-28 218.2 16.6 135 254-393 338-472 (473)
26 cd02170 cytidylyltransferase c 99.9 6.9E-23 1.5E-27 180.5 16.4 133 256-394 1-135 (136)
27 TIGR01518 g3p_cytidyltrns glyc 99.9 4.2E-22 9.1E-27 173.3 13.6 124 259-392 1-125 (125)
28 cd02171 G3P_Cytidylyltransfera 99.9 1.5E-21 3.3E-26 170.3 15.7 127 256-393 1-127 (129)
29 cd02064 FAD_synthetase_N FAD s 99.9 2.9E-21 6.3E-26 178.3 13.3 134 68-203 2-158 (180)
30 PRK07143 hypothetical protein; 99.9 7.5E-21 1.6E-25 186.4 16.2 137 64-203 14-162 (279)
31 PRK11316 bifunctional heptose 99.8 1.2E-20 2.5E-25 198.1 15.1 132 64-201 339-472 (473)
32 PRK05627 bifunctional riboflav 99.8 2.5E-20 5.4E-25 185.3 14.8 135 67-203 15-173 (305)
33 PF06574 FAD_syn: FAD syntheta 99.8 8E-20 1.7E-24 165.3 9.4 130 64-195 4-157 (157)
34 TIGR00083 ribF riboflavin kina 99.8 3.2E-19 6.9E-24 175.9 13.9 134 68-203 1-156 (288)
35 COG2870 RfaE ADP-heptose synth 99.8 5.5E-19 1.2E-23 176.5 11.7 132 65-202 332-465 (467)
36 COG0196 RibF FAD synthase [Coe 99.8 6.7E-18 1.5E-22 166.8 13.3 137 65-203 15-173 (304)
37 cd02039 cytidylyltransferase_l 99.7 2.7E-17 6E-22 144.0 11.0 131 67-199 1-143 (143)
38 PRK00777 phosphopantetheine ad 99.7 1.9E-17 4.1E-22 149.2 7.7 132 66-203 2-145 (153)
39 PRK00777 phosphopantetheine ad 99.7 1.6E-16 3.5E-21 143.2 10.8 130 257-397 2-147 (153)
40 PRK00168 coaD phosphopantethei 99.6 6.4E-15 1.4E-19 133.5 15.4 131 256-396 1-139 (159)
41 PRK01170 phosphopantetheine ad 99.6 9.9E-15 2.1E-19 145.3 11.6 128 258-396 2-143 (322)
42 PRK00168 coaD phosphopantethei 99.6 3.6E-14 7.9E-19 128.6 13.7 126 66-203 2-138 (159)
43 smart00764 Citrate_ly_lig Citr 99.6 2.8E-14 6.2E-19 132.1 12.8 126 71-203 5-165 (182)
44 TIGR01527 arch_NMN_Atrans nico 99.6 2.2E-14 4.8E-19 130.7 11.8 124 67-203 1-136 (165)
45 PF01467 CTP_transf_2: Cytidyl 99.5 9.9E-15 2.2E-19 128.8 6.5 126 260-391 1-157 (157)
46 COG0669 CoaD Phosphopantethein 99.5 3.5E-14 7.6E-19 126.0 9.6 89 256-351 2-91 (159)
47 cd02169 Citrate_lyase_ligase C 99.5 1.7E-13 3.7E-18 135.9 14.7 130 65-203 114-280 (297)
48 cd02163 PPAT Phosphopantethein 99.5 1.1E-13 2.4E-18 124.7 11.3 129 258-396 1-137 (153)
49 cd02039 cytidylyltransferase_l 99.5 1.3E-13 2.8E-18 120.7 10.3 129 258-391 1-143 (143)
50 PLN02388 phosphopantetheine ad 99.5 2.9E-14 6.2E-19 130.9 5.8 134 63-205 17-169 (177)
51 cd02166 NMNAT_Archaea Nicotina 99.5 4.1E-13 9E-18 122.2 13.2 126 67-202 1-137 (163)
52 cd02163 PPAT Phosphopantethein 99.5 2.1E-13 4.5E-18 122.9 11.2 123 68-203 2-136 (153)
53 TIGR01527 arch_NMN_Atrans nico 99.5 4E-13 8.8E-18 122.4 12.6 120 259-395 2-136 (165)
54 TIGR00125 cyt_tran_rel cytidyl 99.5 9E-14 2E-18 106.9 7.1 65 258-324 1-65 (66)
55 COG1057 NadD Nicotinic acid mo 99.5 3.5E-13 7.7E-18 126.0 11.6 136 64-203 2-174 (197)
56 cd02064 FAD_synthetase_N FAD s 99.4 6.1E-13 1.3E-17 122.9 11.8 136 259-396 2-159 (180)
57 PRK01170 phosphopantetheine ad 99.4 1.8E-13 3.8E-18 136.4 8.1 125 67-201 2-140 (322)
58 PRK13964 coaD phosphopantethei 99.4 6.2E-13 1.3E-17 118.0 10.6 89 257-352 2-92 (140)
59 PF01467 CTP_transf_2: Cytidyl 99.4 1.6E-13 3.4E-18 121.1 6.8 62 69-131 1-63 (157)
60 TIGR01510 coaD_prev_kdtB pante 99.4 1.6E-12 3.4E-17 117.4 12.5 119 67-203 1-136 (155)
61 TIGR01510 coaD_prev_kdtB pante 99.4 3.8E-12 8.3E-17 114.9 14.4 129 258-396 1-137 (155)
62 TIGR00125 cyt_tran_rel cytidyl 99.4 3.8E-13 8.3E-18 103.4 6.7 64 67-130 1-64 (66)
63 PRK00071 nadD nicotinic acid m 99.4 2.5E-12 5.5E-17 120.9 13.1 135 64-203 3-180 (203)
64 PRK06973 nicotinic acid mononu 99.4 3.7E-12 8E-17 123.0 13.6 103 65-171 22-141 (243)
65 cd02165 NMNAT Nicotinamide/nic 99.4 2.9E-12 6.3E-17 119.4 11.7 132 68-203 2-171 (192)
66 cd02164 PPAT_CoAS phosphopante 99.4 1.3E-12 2.7E-17 116.6 7.0 121 67-198 1-142 (143)
67 TIGR00482 nicotinate (nicotina 99.3 1.4E-11 3E-16 115.0 12.7 131 69-203 1-172 (193)
68 cd02166 NMNAT_Archaea Nicotina 99.3 1.1E-11 2.3E-16 113.0 11.5 120 259-394 2-137 (163)
69 PRK05627 bifunctional riboflav 99.3 3E-11 6.6E-16 120.4 15.6 136 258-396 15-174 (305)
70 PRK08887 nicotinic acid mononu 99.3 1.4E-11 2.9E-16 113.5 11.4 132 66-203 3-149 (174)
71 cd02168 NMNAT_Nudix Nicotinami 99.3 7.4E-12 1.6E-16 115.9 7.8 129 68-203 2-145 (181)
72 PRK01153 nicotinamide-nucleoti 99.3 8.4E-11 1.8E-15 108.2 13.4 127 67-203 2-139 (174)
73 PRK13964 coaD phosphopantethei 99.2 2.9E-11 6.2E-16 107.4 9.1 87 66-161 2-90 (140)
74 PRK07152 nadD putative nicotin 99.2 6.2E-11 1.3E-15 120.1 12.5 134 65-203 1-168 (342)
75 PRK05379 bifunctional nicotina 99.2 3.4E-11 7.3E-16 121.9 10.1 134 64-204 5-151 (340)
76 COG1019 Predicted nucleotidylt 99.2 7.2E-11 1.6E-15 104.3 10.4 127 63-199 3-145 (158)
77 cd02167 NMNAT_NadR Nicotinamid 99.2 1.5E-10 3.3E-15 104.9 11.3 127 68-201 2-147 (158)
78 cd02164 PPAT_CoAS phosphopante 99.2 9.4E-11 2E-15 104.6 8.8 89 259-351 2-98 (143)
79 cd02168 NMNAT_Nudix Nicotinami 99.1 1.4E-10 3E-15 107.4 7.9 125 259-394 2-144 (181)
80 PRK05379 bifunctional nicotina 99.1 7E-10 1.5E-14 112.4 12.4 131 254-396 4-151 (340)
81 PRK07143 hypothetical protein; 99.1 6E-09 1.3E-13 102.6 17.1 136 255-395 14-162 (279)
82 cd09286 NMNAT_Eukarya Nicotina 99.0 2.1E-09 4.5E-14 102.9 11.7 85 67-153 2-99 (225)
83 cd02167 NMNAT_NadR Nicotinamid 99.0 5.4E-09 1.2E-13 94.8 13.5 128 258-397 1-151 (158)
84 PRK08099 bifunctional DNA-bind 99.0 4.8E-09 1E-13 108.4 14.5 130 65-201 52-204 (399)
85 PLN02388 phosphopantetheine ad 99.0 3E-09 6.5E-14 97.9 10.7 137 251-396 14-168 (177)
86 PRK13670 hypothetical protein; 99.0 2E-09 4.4E-14 110.6 10.2 104 67-180 3-114 (388)
87 PRK01153 nicotinamide-nucleoti 99.0 5.7E-09 1.2E-13 96.1 11.7 124 258-396 2-140 (174)
88 COG0669 CoaD Phosphopantethein 99.0 2.5E-09 5.5E-14 95.3 8.7 88 65-161 2-90 (159)
89 PLN02945 nicotinamide-nucleoti 99.0 6.4E-09 1.4E-13 100.2 12.2 98 65-162 22-139 (236)
90 COG1019 Predicted nucleotidylt 98.9 3.3E-09 7.1E-14 93.9 6.7 126 255-390 4-144 (158)
91 PRK00071 nadD nicotinic acid m 98.9 4.2E-08 9E-13 92.3 14.0 95 256-354 4-113 (203)
92 cd02156 nt_trans nucleotidyl t 98.9 1.9E-09 4.1E-14 90.8 3.8 58 258-319 1-58 (105)
93 cd02165 NMNAT Nicotinamide/nic 98.8 4.7E-08 1E-12 91.1 12.9 93 258-355 1-108 (192)
94 PRK13793 nicotinamide-nucleoti 98.8 1.8E-08 3.8E-13 94.1 9.7 59 66-126 5-63 (196)
95 PRK08887 nicotinic acid mononu 98.8 4.6E-08 1E-12 90.1 12.3 131 256-396 2-150 (174)
96 PRK13671 hypothetical protein; 98.8 2.3E-08 4.9E-13 99.1 9.8 89 70-163 5-103 (298)
97 cd02156 nt_trans nucleotidyl t 98.7 1.3E-08 2.9E-13 85.6 5.0 57 68-126 2-58 (105)
98 TIGR00482 nicotinate (nicotina 98.7 1.8E-07 4E-12 87.3 12.9 90 261-354 2-106 (193)
99 cd00560 PanC Pantoate-beta-ala 98.7 1.6E-08 3.5E-13 99.4 5.0 112 66-181 25-163 (277)
100 TIGR00124 cit_ly_ligase [citra 98.7 2.4E-07 5.1E-12 93.6 13.1 129 65-202 139-308 (332)
101 PRK00380 panC pantoate--beta-a 98.7 2E-08 4.4E-13 99.0 4.7 110 67-181 26-162 (281)
102 PRK08099 bifunctional DNA-bind 98.6 2.2E-07 4.7E-12 96.2 11.9 139 250-398 46-209 (399)
103 PRK13793 nicotinamide-nucleoti 98.6 6.3E-08 1.4E-12 90.4 6.7 60 256-319 4-63 (196)
104 PRK07152 nadD putative nicotin 98.6 4.1E-07 8.8E-12 92.3 12.2 133 256-395 1-168 (342)
105 PRK13671 hypothetical protein; 98.6 1.4E-07 3.1E-12 93.5 8.5 85 263-352 7-103 (298)
106 cd02169 Citrate_lyase_ligase C 98.6 5.2E-07 1.1E-11 89.8 12.5 131 255-397 113-282 (297)
107 COG1057 NadD Nicotinic acid mo 98.6 6E-07 1.3E-11 84.3 11.7 135 255-396 2-175 (197)
108 TIGR00124 cit_ly_ligase [citra 98.5 2E-07 4.3E-12 94.2 8.5 64 255-327 138-202 (332)
109 TIGR01526 nadR_NMN_Atrans nico 98.5 1.8E-07 3.9E-12 94.3 8.2 68 256-327 1-70 (325)
110 TIGR01526 nadR_NMN_Atrans nico 98.5 2.5E-07 5.5E-12 93.3 7.5 57 66-125 2-59 (325)
111 COG1056 NadR Nicotinamide mono 98.5 8.6E-07 1.9E-11 81.0 10.1 129 64-203 2-141 (172)
112 smart00764 Citrate_ly_lig Citr 98.5 2E-06 4.3E-11 79.9 12.4 123 263-396 6-166 (182)
113 COG1056 NadR Nicotinamide mono 98.3 8E-07 1.7E-11 81.2 5.8 62 255-320 2-64 (172)
114 PRK06973 nicotinic acid mononu 98.3 6.5E-06 1.4E-10 79.8 12.2 60 255-320 21-83 (243)
115 KOG3351 Predicted nucleotidylt 98.3 2.7E-06 5.9E-11 81.0 7.8 130 62-201 139-285 (293)
116 TIGR00083 ribF riboflavin kina 98.3 6.6E-06 1.4E-10 81.6 10.9 135 259-396 1-157 (288)
117 PF06574 FAD_syn: FAD syntheta 98.2 7.7E-06 1.7E-10 74.2 8.9 100 255-355 4-119 (157)
118 KOG3351 Predicted nucleotidylt 98.1 3E-06 6.6E-11 80.6 5.5 84 250-334 136-227 (293)
119 cd09286 NMNAT_Eukarya Nicotina 98.1 2.2E-05 4.7E-10 75.3 10.8 69 258-329 2-76 (225)
120 COG0196 RibF FAD synthase [Coe 98.0 0.00011 2.3E-09 73.4 13.1 139 256-398 15-176 (304)
121 PF08218 Citrate_ly_lig: Citra 97.9 9.1E-05 2E-09 67.9 10.7 124 71-203 5-165 (182)
122 TIGR00018 panC pantoate--beta- 97.8 4E-05 8.6E-10 75.7 7.0 64 67-134 26-92 (282)
123 PRK13670 hypothetical protein; 97.7 6.4E-05 1.4E-09 77.6 7.5 85 263-351 8-103 (388)
124 PLN02660 pantoate--beta-alanin 97.7 6.7E-05 1.5E-09 74.1 7.1 64 67-134 25-91 (284)
125 PF05636 HIGH_NTase1: HIGH Nuc 97.5 0.00012 2.6E-09 75.6 6.1 90 68-162 4-103 (388)
126 COG1323 Predicted nucleotidylt 97.4 0.00048 1E-08 70.0 7.6 88 71-162 7-103 (358)
127 COG3053 CitC Citrate lyase syn 97.3 0.0049 1.1E-07 60.7 13.9 136 61-203 141-316 (352)
128 PLN02945 nicotinamide-nucleoti 97.3 0.00063 1.4E-08 65.7 7.6 71 254-327 20-95 (236)
129 COG1323 Predicted nucleotidylt 97.2 0.0009 2E-08 68.1 7.2 83 264-351 9-103 (358)
130 TIGR00339 sopT ATP sulphurylas 97.0 0.0051 1.1E-07 63.5 11.2 94 65-163 183-289 (383)
131 PF05636 HIGH_NTase1: HIGH Nuc 97.0 0.0013 2.9E-08 67.9 6.1 85 264-352 9-104 (388)
132 PF08218 Citrate_ly_lig: Citra 96.8 0.0036 7.7E-08 57.6 6.9 56 264-328 7-63 (182)
133 TIGR00018 panC pantoate--beta- 96.4 0.01 2.2E-07 58.9 7.5 71 255-329 21-94 (282)
134 COG3053 CitC Citrate lyase syn 96.3 0.014 2.9E-07 57.6 7.7 67 252-327 141-208 (352)
135 PLN02660 pantoate--beta-alanin 95.9 0.022 4.8E-07 56.4 7.4 71 255-329 20-93 (284)
136 PRK00380 panC pantoate--beta-a 95.8 0.031 6.8E-07 55.4 8.0 73 255-329 21-94 (281)
137 cd00560 PanC Pantoate-beta-ala 95.1 0.067 1.5E-06 53.0 7.5 92 255-350 21-120 (277)
138 PF02569 Pantoate_ligase: Pant 94.6 0.079 1.7E-06 52.5 6.5 67 67-134 23-92 (280)
139 PRK04149 sat sulfate adenylylt 94.3 0.88 1.9E-05 47.3 13.7 95 64-163 185-290 (391)
140 PRK13477 bifunctional pantoate 94.0 0.096 2.1E-06 56.2 5.9 65 257-329 21-92 (512)
141 COG0414 PanC Panthothenate syn 93.6 0.28 6.1E-06 48.2 7.8 74 58-134 16-92 (285)
142 PF01747 ATP-sulfurylase: ATP- 93.3 0.38 8.2E-06 45.9 8.1 93 66-164 21-126 (215)
143 COG2046 MET3 ATP sulfurylase ( 92.9 1.4 3E-05 45.1 11.9 96 64-164 182-288 (397)
144 PRK13477 bifunctional pantoate 92.7 0.26 5.6E-06 52.9 6.8 68 67-135 21-91 (512)
145 cd00517 ATPS ATP-sulfurylase. 92.7 1.4 3.1E-05 45.1 11.9 96 64-164 155-263 (353)
146 PF02569 Pantoate_ligase: Pant 92.7 0.24 5.1E-06 49.1 6.0 72 255-329 21-94 (280)
147 KOG3199 Nicotinamide mononucle 92.3 2.7 5.9E-05 39.8 12.1 60 65-125 8-72 (234)
148 COG0414 PanC Panthothenate syn 91.9 0.28 6.1E-06 48.2 5.3 70 253-328 19-93 (285)
149 PRK05537 bifunctional sulfate 90.4 1.8 3.8E-05 47.3 10.3 97 64-164 185-291 (568)
150 KOG3042 Panthothenate syntheta 88.4 1.2 2.7E-05 42.3 6.2 67 67-134 25-94 (283)
151 PLN02341 pfkB-type carbohydrat 79.8 0.5 1.1E-05 50.2 -0.4 29 255-283 413-441 (470)
152 TIGR00339 sopT ATP sulphurylas 77.4 6.9 0.00015 40.6 7.1 89 257-352 184-289 (383)
153 KOG3042 Panthothenate syntheta 76.9 4.1 8.9E-05 38.8 4.7 40 255-295 23-62 (283)
154 KOG3199 Nicotinamide mononucle 64.3 24 0.00052 33.6 6.8 69 257-328 9-83 (234)
155 PLN02341 pfkB-type carbohydrat 38.6 9.1 0.0002 40.7 -0.4 29 64-92 413-441 (470)
156 COG2046 MET3 ATP sulfurylase ( 30.7 57 0.0012 33.8 3.8 93 254-354 181-289 (397)
157 COG0159 TrpA Tryptophan syntha 29.3 5.6E+02 0.012 25.4 10.3 31 67-97 96-128 (265)
158 TIGR01212 radical SAM protein, 28.5 5.9E+02 0.013 25.2 11.4 121 36-159 80-212 (302)
159 cd00517 ATPS ATP-sulfurylase. 28.3 3.1E+02 0.0067 28.3 8.7 89 257-353 157-263 (353)
160 COG0352 ThiE Thiamine monophos 23.7 2.1E+02 0.0045 27.3 6.1 15 189-203 165-179 (211)
161 PRK05198 2-dehydro-3-deoxyphos 23.7 51 0.0011 32.5 2.0 56 73-128 187-259 (264)
162 COG0826 Collagenase and relate 23.6 4.5E+02 0.0098 27.0 8.9 108 82-203 52-159 (347)
163 PRK12457 2-dehydro-3-deoxyphos 23.5 48 0.001 33.0 1.7 62 73-134 195-273 (281)
164 PRK02615 thiamine-phosphate py 23.0 3E+02 0.0064 28.3 7.4 27 75-101 219-247 (347)
165 PRK15452 putative protease; Pr 22.9 8.7E+02 0.019 25.8 11.2 117 255-390 23-151 (443)
166 PRK04149 sat sulfate adenylylt 22.7 4.1E+02 0.0089 27.8 8.5 90 257-353 187-291 (391)
167 PRK00536 speE spermidine synth 21.3 1E+02 0.0022 30.4 3.5 95 56-159 64-168 (262)
168 COG2355 Zn-dependent dipeptida 21.2 2.1E+02 0.0045 29.1 5.8 91 75-168 166-267 (313)
169 COG0647 NagD Predicted sugar p 20.2 4.5E+02 0.0098 26.0 7.8 92 69-165 125-219 (269)
No 1
>PLN02406 ethanolamine-phosphate cytidylyltransferase
Probab=100.00 E-value=8.6e-94 Score=726.88 Aligned_cols=410 Identities=72% Similarity=1.112 Sum_probs=370.6
Q ss_pred cccccccccccccchhHHHHHHHhhhhcccCCcccccCchhhhHHHhhhhcCCCCCeEEEEecccCcCcHHHHHHHHHHH
Q 014503 10 WIWDGLYYYPHFFGGLMLTAALLGVSTSYFGGIGVFSLPHLWSDCFHKKKCGKKKRVRVYMDGCFDLMHYGHANALRQAK 89 (423)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~G~FD~lH~GH~~lL~qA~ 89 (423)
+.|.+.++++|++||+|+++|+||+++.+++ ..+|++|++.-..++.++.++.|||++||||++|.||+++|+||+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~rV~~~G~FDllH~GH~~~L~qAk 77 (418)
T PLN02406 2 SISSAKYVASCLIGGLMLGASVLGLSLAGFG----SSLPYAWPDLGIFKKKKKKKPVRVYMDGCFDMMHYGHANALRQAR 77 (418)
T ss_pred CccccceeeehhhHHHHHHHHHHHHHhcccc----ccccccchhhhhhccccCCCceEEEEcCeeCCCCHHHHHHHHHHH
Confidence 3456788899999999999999999998876 235667775112244555677899999999999999999999999
Q ss_pred HhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhcCccccEEEecCCccccHHHHHHHHhhcCccEEEEcCCCCCCCCC
Q 014503 90 ALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDG 169 (423)
Q Consensus 90 ~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~~VD~vi~~~p~~~~~efl~~ll~~~~~d~VV~G~D~~~g~~g 169 (423)
++|++|+|||++|+.+..+|++|+++++||++++++|+|||+|++++||.++.+|+++++++++||++|||+||+...+|
T Consensus 78 ~lGd~LIVGV~SDe~i~~~Kg~PV~~~eER~~~v~alk~VD~Vv~~apy~~~~d~~~~li~~~~~D~vVhGdD~~~~~~g 157 (418)
T PLN02406 78 ALGDELVVGVVSDEEIIANKGPPVTPMHERMIMVSGVKWVDEVIPDAPYAITEEFMNKLFNEYNIDYIIHGDDPCLLPDG 157 (418)
T ss_pred HhCCEEEEEEecChhhhccCCCCcCCHHHHHHHHHhcCCCceEEeCCccccchHHHHHHHHHhCCCEEEECCCccccCCc
Confidence 99999999999999998889999999999999999999999999999999999999989999999999999999988899
Q ss_pred CcHHHHHHhCCcEEEeccCCCCCHHHHHHHHHhccccccccccccCCCCCCCchh-------hhcccccccccccccccc
Q 014503 170 TDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSSMEDTKACEDHNNASLPRDPLR-------AIQSKDAHLSQFLPTSRR 242 (423)
Q Consensus 170 ~~~~~~lk~~g~~~~v~r~~~iSST~Ir~rI~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~ 242 (423)
.+.|...+..|++++++|++|+|||+|++||+.++++|+....+.....+++|+. .+.+..+.+++|++|+++
T Consensus 158 ~d~y~~~k~~Gr~~~i~rt~GvSTTdIv~Ril~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~ 237 (418)
T PLN02406 158 TDAYALAKKAGRYKQIKRTEGVSSTDIVGRMLLCVRERSISDSHNHSSLQRQFSHGHSQFEDGGSGSGTRVSHFLPTSRR 237 (418)
T ss_pred hHHHHHHHhCCEEEEEecCCCCCHHHHHHHHHHhhhccccccccchhhhhhhhccccccccccCCCCCCCcccccccHHH
Confidence 9999999999999999999999999999999999999875433322233333331 123345677999999999
Q ss_pred hhccccCCCCCCCCeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhhccc
Q 014503 243 IVQFSNCKGPGPNARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYV 322 (423)
Q Consensus 243 i~~~~~~~~~~~~~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~~~V 322 (423)
|.||++|+.|.|++++||++|+||+||.||+++|++|+++||+|||||++|++++++||+++|+|+++||+++|++|+||
T Consensus 238 i~qf~~g~~p~~~~~iVyv~G~FDlfH~GHi~~L~~Ak~lGd~LIVGV~sD~~v~~~KG~~~Pi~~~~ER~~~v~ack~V 317 (418)
T PLN02406 238 IVQFSNGKGPGPDARIVYIDGAFDLFHAGHVEILRLARALGDFLLVGIHTDQTVSAHRGAHRPIMNLHERSLSVLACRYV 317 (418)
T ss_pred HHHHhccCCCCCCCeEEEECCeeccCCHHHHHHHHHHHHhCCEEEEEEeccHHHHHhcCCCCCCCCHHHHHHHHhccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999889999999999999999999
Q ss_pred CeeEEcCCCCchHHHHhhcCccEEEecCCcCCCCCCCCCCChHHHHHhCCeEEEeCCCCCCCHHHHHHHHHhchHhHHHH
Q 014503 323 DEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIANHEAYMKR 402 (423)
Q Consensus 323 d~Vvi~~p~~~~~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~i~~~~~~Stt~Ii~RI~~~~~~y~~r 402 (423)
|+||+++|+.++.++|++++||++|||++|+...+...+.|+|.+++.+|++..+++++++|||+||+||++||++|++|
T Consensus 318 D~VVi~ap~~~~~~~i~~~~~d~vvhG~~~~~~~~~~~~~D~Y~v~k~~G~~~~i~~~~~iSTt~II~RI~~~~~~y~~R 397 (418)
T PLN02406 318 DEVIIGAPWEVSKDMITTFNISLVVHGTVAENNDFLKGEDDPYAVPKSMGIFQVLESPLDITTSTIIRRIVANHEAYQKR 397 (418)
T ss_pred cEEEeCCCCCCCHHHHHHhCCCEEEECCcCCCccccCCCCcchHHHhcCceEEEeCCCCCCcHHHHHHHHHHhHHHHHHH
Confidence 99999999999999999999999999998865555556689999999999999999999999999999999999999999
Q ss_pred HhhhhHhHHHHHHhcccccCC
Q 014503 403 NAKKAVSEKKYYEQKMFVSGD 423 (423)
Q Consensus 403 ~~~k~~~e~~~~~~~~~~~~~ 423 (423)
|++|+++|..+|++|.||+||
T Consensus 398 n~~K~~ke~~~~~~~~~~~~~ 418 (418)
T PLN02406 398 NEKKAESEKRYYESKSFVSGD 418 (418)
T ss_pred HHHHHHHHHHHHhhccCCCCC
Confidence 999999999999999999997
No 2
>KOG2803 consensus Choline phosphate cytidylyltransferase/Predicted CDP-ethanolamine synthase [Lipid transport and metabolism]
Probab=100.00 E-value=2.3e-90 Score=662.53 Aligned_cols=348 Identities=52% Similarity=0.859 Sum_probs=321.7
Q ss_pred CCCeEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhcCccccEEEecCCccccH
Q 014503 63 KKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITE 142 (423)
Q Consensus 63 ~~~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~~VD~vi~~~p~~~~~ 142 (423)
.++.|||++||||++|+||.++|+||+++|++|+||||+|++|..+||+|+||.+||++|+++|||||+||+++||.++.
T Consensus 6 ~~~~rVw~DGCfDm~HyGHanaLrQAkalGdkLivGVHsDeeI~~nKGpPV~t~eERy~~v~~ikWVDEVV~~APyvtt~ 85 (358)
T KOG2803|consen 6 NRPVRVWADGCFDMVHYGHANALRQAKALGDKLIVGVHSDEEITLNKGPPVFTDEERYEMVKAIKWVDEVVEGAPYVTTL 85 (358)
T ss_pred CCceeEEeccchhhhhhhhhHHHHHHHHhCCeEEEEecchHHHHhcCCCCcccHHHHHHHHhhcchhhhhhcCCCeeccH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCccEEEEcCCCCCCCCCCcHHHHHHhCCcEEEeccCCCCCHHHHHHHHHhccccccccccccCCCCCCCc
Q 014503 143 QFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSSMEDTKACEDHNNASLPRDP 222 (423)
Q Consensus 143 efl~~ll~~~~~d~VV~G~D~~~g~~g~~~~~~lk~~g~~~~v~r~~~iSST~Ir~rI~~~~~~~~~~~~~~~~~~~~~~ 222 (423)
++++ +|+||+||||+|.+..++|.|+|.+.|++|++++++||.|+|||+|++||+..++.++ ++....+.++..+
T Consensus 86 ~~md----~y~cd~vvHGdDit~~a~G~D~Y~~vK~agrykevKRT~GVSTTelvgRmll~~~~~~-~~~~~~~~~e~~~ 160 (358)
T KOG2803|consen 86 EWMD----KYGCDYVVHGDDITLDADGLDCYRLVKAAGRYKEVKRTEGVSTTELVGRMLLKKRNHH-SDEVSSSQRELSF 160 (358)
T ss_pred HHHH----HhCCeEEEeCCcceecCCCccHHHHHHHhcchheeeeccCcchhhhhhHhhhhccCCC-ccccchhhhhhhh
Confidence 9984 7999999999999999999999999999999999999999999999999999999888 3322222222333
Q ss_pred h----hhhcccccccccccccccchhccccCCCCCCCCeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhh
Q 014503 223 L----RAIQSKDAHLSQFLPTSRRIVQFSNCKGPGPNARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSE 298 (423)
Q Consensus 223 ~----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~ 298 (423)
+ +...++|+++++|+|++++|+||++|+.|.|+.++||++|.|||||.||+++|++|+.+||+|||||++|+.+++
T Consensus 161 ~~g~~~~~~sp~t~~s~F~~tt~~i~~~~~G~~p~p~~kvVYvdGaFDLFH~GHl~~Le~ak~lgdyLIvGI~~D~~vne 240 (358)
T KOG2803|consen 161 SSGTDDDGLSPWTRVSVFLPTTQKIIQFSNGREPKPTDKVVYVDGAFDLFHAGHLDFLEKAKRLGDYLIVGIHTDQTVNE 240 (358)
T ss_pred ccccCCcccCCccceeeeeecCccceEeecCCCCCCCCcEEEEcCchhhhccchHHHHHHHHhccCceEEEeecCcchhh
Confidence 2 344678999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCHHHHHHHHHhhcccCeeEEcCCCCchHHHHhhcCccEEEecCCcCCCCCCCCCCChHHHHHhCCeEEEeC
Q 014503 299 HRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLE 378 (423)
Q Consensus 299 ~Kg~~~pi~~~~ER~~~v~~~~~Vd~Vvi~~p~~~~~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~i~ 378 (423)
+||.|+||||++||.++|++|||||+|++++|+..+.++|+++++|.|++|..... ....+||..++..|++..++
T Consensus 241 ykgs~~PiMnl~ER~LsvlackyVdeVvvGaP~~v~s~~i~~~~~~~v~~g~~~~~----~~~~~py~~~k~~~i~~~~~ 316 (358)
T KOG2803|consen 241 YKGSNYPIMNLHERVLSVLACKYVDEVVVGAPYEVTSEFIKLFNIDKVAHGTIPDF----RDPSDPYADPKRRGIFEEAD 316 (358)
T ss_pred hccCCCccchHHHHHHHHhhhcccceEEEcCchhccHHHHHhcCceEEEEeccccc----cCccCccccchhhcchhhcC
Confidence 99999999999999999999999999999999999999999999999999982211 23456999999999999999
Q ss_pred CCCCCCHHHHHHHHHhchHhHHHHHhhhhHhHHHHHHhccc
Q 014503 379 SPKSITTTSVAQRIIANHEAYMKRNAKKAVSEKKYYEQKMF 419 (423)
Q Consensus 379 ~~~~~Stt~Ii~RI~~~~~~y~~r~~~k~~~e~~~~~~~~~ 419 (423)
+..++||+.|++||+.||++|++||+||+.+|..+++++..
T Consensus 317 ~~~dltte~Iv~RIis~r~~Ye~Rn~kk~~k~~~~~~~~~~ 357 (358)
T KOG2803|consen 317 SGSDLTTELIVERIISNRQAYEARNQKKEGKEAPLNEAQHR 357 (358)
T ss_pred CcccccHHHHHHHHHHHHHHHHHHhHHhhhcccchhhhhcc
Confidence 99999999999999999999999999999999999988653
No 3
>PTZ00308 ethanolamine-phosphate cytidylyltransferase; Provisional
Probab=100.00 E-value=1.4e-79 Score=617.61 Aligned_cols=346 Identities=49% Similarity=0.820 Sum_probs=315.0
Q ss_pred CCCCCeEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhcCccccEEEecCCccc
Q 014503 61 GKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPYAI 140 (423)
Q Consensus 61 ~~~~~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~~VD~vi~~~p~~~ 140 (423)
+..++++||++||||++|.||+++|+||+++|+.|+||+++|+.+.+.|++|+++++||++++++|+|||+|+++.||+.
T Consensus 7 ~~~~~~~v~~~G~FD~vH~GH~~~L~qAk~~g~~Livgv~~d~~i~~~K~~pi~~~eeR~~~l~~~~~VD~Vv~~~p~~~ 86 (353)
T PTZ00308 7 KKPGTIRVWVDGCFDMLHFGHANALRQARALGDELFVGCHSDEEIMRNKGPPVMHQEERYEALRACKWVDEVVEGYPYTT 86 (353)
T ss_pred CCCCcEEEEEEeecccCCHHHHHHHHHHHHhCCEEEEEeCCHHHHhhcCCCCCCCHHHHHHHHHhcCCccEEEECCCCCc
Confidence 34557899999999999999999999999999999999999999988888899999999999999999999999889987
Q ss_pred cHHHHHHHHhhcCccEEEEcCCCCCCCCCCcHHHHHHhCCcEEEeccCCCCCHHHHHHHHHhccccccccccccCCCCCC
Q 014503 141 TEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSSMEDTKACEDHNNASLPR 220 (423)
Q Consensus 141 ~~efl~~ll~~~~~d~VV~G~D~~~g~~g~~~~~~lk~~g~~~~v~r~~~iSST~Ir~rI~~~~~~~~~~~~~~~~~~~~ 220 (423)
+.+|+ ++++||+||||+||++|.+|.++|+.++..|+++.++|++|+|||+|++||+.++++++.... ....+
T Consensus 87 ~~~fI----~~l~~d~vv~GdD~~~g~~g~~~~~~lk~~G~~~~v~rt~g~STt~ii~ril~~~~~~~~~~~-~~~~~-- 159 (353)
T PTZ00308 87 RLEDL----ERLECDFVVHGDDISVDLNGRNSYQEIIDAGKFKVVKRTEGISTTDLVGRMLLCTKSHLLKSV-DEVQL-- 159 (353)
T ss_pred hHHHH----HHhCCCEEEECCCCCCCCCccchHHHHHhCCeEEEEecCCCCCHHHHHHHHHHhhhccccccc-ccccc--
Confidence 77776 578999999999999999999999999999999999999999999999999999998764221 11111
Q ss_pred CchhhhcccccccccccccccchhccccCCCCCCCCeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhcc
Q 014503 221 DPLRAIQSKDAHLSQFLPTSRRIVQFSNCKGPGPNARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHR 300 (423)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~K 300 (423)
. .....++.+++|++++++|.+|+.+..|.+++++||++|+|||||.||+++|++|+++||+|||||++|++++++|
T Consensus 160 --~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kiv~~~G~FDl~H~GHi~~L~~A~~lgd~LIVgV~sD~~v~~~K 236 (353)
T PTZ00308 160 --E-SSLFPYTPTSHCLTTSRKIVQFSNNRSPKPGDRIVYVDGSFDLFHIGHIRVLQKARELGDYLIVGVHEDQVVNEQK 236 (353)
T ss_pred --c-cccccCCCcceeecchhheeeccccCCCCCCCeEEEECCccCCCCHHHHHHHHHHHHhCCEEEEEEcchHHhHhhc
Confidence 1 1223556678899999999999999888888999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHhhcccCeeEEcCCCCchHHHHhhcCccEEEecCCcCCCCCCCCCCChHHHHHhCCeEEEeCCC
Q 014503 301 GSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESP 380 (423)
Q Consensus 301 g~~~pi~~~~ER~~~v~~~~~Vd~Vvi~~p~~~~~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~i~~~ 380 (423)
|+++|+|+++||++++++|+|||+|++++|+.++.+++++++||++|||.||...+ .+++.|+|.+++.+|++..++++
T Consensus 237 g~~~Pi~~~~eR~~~v~a~~~Vd~Vvi~~~~~~~~~~i~~~~~d~vv~G~d~~~~~-~~~~~d~y~~~k~~G~~~~i~~~ 315 (353)
T PTZ00308 237 GSNYPIMNLNERVLGVLSCRYVDEVVIGAPFDVTKEVIDSLHINVVVGGKFSDLVN-EEGGSDPYEVPKAMGIFKEVDSG 315 (353)
T ss_pred CCCCCCCCHHHHHHHHHhhCCCCeEEEcCCCCChHHHHHHhCCCEEEECCCCcccc-CCCcccchHHHhcCceEEEeCCC
Confidence 98899999999999999999999999999999999999999999999999986422 24568899999999999999999
Q ss_pred CCCCHHHHHHHHHhchHhHHHHHhhhhHhHHHHHHhc
Q 014503 381 KSITTTSVAQRIIANHEAYMKRNAKKAVSEKKYYEQK 417 (423)
Q Consensus 381 ~~~Stt~Ii~RI~~~~~~y~~r~~~k~~~e~~~~~~~ 417 (423)
+++|||+||+||++||++|++||++|.++|..+|+.+
T Consensus 316 ~~~sTt~ii~RI~~~r~~~~~r~~~k~~~e~~~~~~~ 352 (353)
T PTZ00308 316 CDLTTDSIVDRVVKNRLAFLKRQAKKRAKEIKSQEIK 352 (353)
T ss_pred CCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999999999999865
No 4
>cd02173 ECT CTP:phosphoethanolamine cytidylyltransferase (ECT). CTP:phosphoethanolamine cytidylyltransferase (ECT) catalyzes the conversion of phosphoethanolamine to CDP-ethanolamine as part of the CDP-ethanolamine biosynthesis pathway. ECT expression in hepatocytes is localized predominantly to areas of the cytoplasm that are rich in rough endoplasmic reticulum. Several ECTs, including yeast and human ECT, have large repetitive sequences located within their N- and C-termini.
Probab=100.00 E-value=1.1e-38 Score=286.72 Aligned_cols=152 Identities=57% Similarity=0.937 Sum_probs=141.3
Q ss_pred CCeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhhcccCeeEEcCCCCch
Q 014503 255 NARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVT 334 (423)
Q Consensus 255 ~~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~~~Vd~Vvi~~p~~~~ 334 (423)
++++||++|+||+||.||+++|++|+++||+|||||++|+++++.||+++|+|+++||++++++|++||+|++++|+.++
T Consensus 1 ~~~iv~~~G~FD~~H~GHi~~L~~A~~lgd~liVgV~~D~~~~~~K~~~~pi~~~~eR~~~v~~~~~Vd~V~v~~~~~~~ 80 (152)
T cd02173 1 GDKVVYVDGAFDLFHIGHIEFLEKARELGDYLIVGVHDDQTVNEYKGSNYPIMNLHERVLSVLACRYVDEVVIGAPYVIT 80 (152)
T ss_pred CCeEEEEcCcccCCCHHHHHHHHHHHHcCCEEEEEEeCcHHHHhhcCCCCCCCCHHHHHHHHHhcCCCCEEEECCCCcch
Confidence 36899999999999999999999999999999999999999999999778999999999999999999999999998888
Q ss_pred HHHHhhcCccEEEecCCcCCCCCCCCCCChHHHHHhCCeEEEeCCCCCCCHHHHHHHHHhchHhHHHHHhhhh
Q 014503 335 KDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIANHEAYMKRNAKKA 407 (423)
Q Consensus 335 ~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~i~~~~~~Stt~Ii~RI~~~~~~y~~r~~~k~ 407 (423)
.+++++++||++++|.+|...+. ..+.++|.+++.+|++.++++++++|||+|++||+++|+.|++||++|.
T Consensus 81 ~~~~~~~~~d~vv~G~d~~~~~~-~~~~~~~~~~~~~G~~~~v~~~~~~Sts~Ii~rI~~~~~~y~~r~~~k~ 152 (152)
T cd02173 81 KELIEHFKIDVVVHGKTEETPDS-LDGEDPYAVPKEMGIFKEIDSGSDLTTRDIVNRIIKNRLAYEARNKKKE 152 (152)
T ss_pred HHHHHHhCCCEEEECCCCccccc-cCchHHHHHHHhCCeEEEecCCCCCCHHHHHHHHHHhHHHHHHHHhccC
Confidence 99999999999999999865321 2356789999999999999999999999999999999999999999984
No 5
>PLN02413 choline-phosphate cytidylyltransferase
Probab=100.00 E-value=5.3e-37 Score=294.99 Aligned_cols=154 Identities=32% Similarity=0.596 Sum_probs=140.0
Q ss_pred CCCCCeEEEEcCeeccCCHHHHHHHHHHHhcC--CEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhhcccCeeEEcC
Q 014503 252 PGPNARVVYIDGAFDLFHAGHVEILKKARQLG--DFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGA 329 (423)
Q Consensus 252 ~~~~~~iv~~~G~FDl~H~GHi~~L~~A~~~g--d~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~~~Vd~Vvi~~ 329 (423)
+.....+||++|+||+||.||+++|++|+++| |+|||||++|++++++|| +|+|+++||+++|++|+|||+||+++
T Consensus 23 ~~~r~~rVyvdG~FDLfH~GHir~L~qAK~lg~~d~LIVGV~sDe~v~~~KG--rPIm~~~ER~e~V~acKyVDeVV~~a 100 (294)
T PLN02413 23 PSDRPVRVYADGIYDLFHFGHARSLEQAKKLFPNTYLLVGCCNDELTHKYKG--KTVMTEDERYESLRHCKWVDEVIPDA 100 (294)
T ss_pred CCCCceEEEEeCchhhCCHHHHHHHHHHHHhCCCCEEEEEecccHHHHhcCC--CCCCCHHHHHHHHHhcccccEEeeCC
Confidence 34456789999999999999999999999996 799999999999999999 49999999999999999999999999
Q ss_pred CCCchHHHHhhcCccEEEecCCcCCCCCCCCCCChHHHHHhCCeEEEeCCCCCCCHHHHHHHHHhchHhHHHHHhhhhH
Q 014503 330 PWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIANHEAYMKRNAKKAV 408 (423)
Q Consensus 330 p~~~~~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~i~~~~~~Stt~Ii~RI~~~~~~y~~r~~~k~~ 408 (423)
||.++.++|++++||++|||++...+ ....+.|+|..++.+|++.++++++++|||+||+||+++++.|++||.+|..
T Consensus 101 P~~~t~efI~~~kpDiVvhGd~~~~d-~~~~g~D~Y~~vK~~G~f~~i~Rt~gvSTTdII~RIlk~y~~Y~~Rn~~rg~ 178 (294)
T PLN02413 101 PWVITQEFLDKHRIDYVAHDALPYAD-ASGAGKDVYEFVKKIGKFKETKRTDGISTSDIIMRIVKDYNQYVMRNLARGY 178 (294)
T ss_pred CccccHHHHHHhCCCEEEECCCCCcc-ccccCchhHHHHHHCCeEEEecCCCCcCHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999753322 1124578999999999999999999999999999999999999999999854
No 6
>cd02174 CCT CTP:phosphocholine cytidylyltransferase. CTP:phosphocholine cytidylyltransferase (CCT) catalyzes the condensation of CTP and phosphocholine to form CDP-choline as the rate-limiting and regulatory step in the CDP-choline pathway. CCT is unique in that its enzymatic activity is regulated by the extent of its association with membrane structures. A current model posts that the elastic stress of the bilayer curvature is sensed by CCT and this governs the degree of membrane association, thus providing a mechanism for both positive and negative regulation of activity.
Probab=100.00 E-value=2.9e-36 Score=270.28 Aligned_cols=145 Identities=35% Similarity=0.684 Sum_probs=136.4
Q ss_pred eEEEEcCeeccCCHHHHHHHHHHHhcC--CEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhhcccCeeEEcCCCCch
Q 014503 257 RVVYIDGAFDLFHAGHVEILKKARQLG--DFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVT 334 (423)
Q Consensus 257 ~iv~~~G~FDl~H~GHi~~L~~A~~~g--d~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~~~Vd~Vvi~~p~~~~ 334 (423)
+.||++|+||+||.||+++|++|+++| |+|||||++|++++++||+ |+|+++||++++++|+|||+|++++|+..+
T Consensus 3 ~rV~~~G~FDl~H~GHi~~L~~A~~lg~~d~LiVgV~sD~~~~~~k~~--pi~~~~eR~~~l~~~~~Vd~Vi~~~~~~~~ 80 (150)
T cd02174 3 VRVYVDGCFDLFHYGHANALRQAKKLGPNDYLIVGVHSDEEIHKHKGP--PVMTEEERYEAVRHCKWVDEVVEGAPYVTT 80 (150)
T ss_pred eEEEEeCccCCCCHHHHHHHHHHHHhCCCCEEEEEEecCHHHhhcCCC--CcCCHHHHHHHHHhcCCCCeEEECCCCCCh
Confidence 579999999999999999999999999 9999999999999999985 999999999999999999999999998888
Q ss_pred HHHHhhcCccEEEecCCcCCCCCCCCCCChHHHHHhCCeEEEeCCCCCCCHHHHHHHHHhchHhHHHHHhhh
Q 014503 335 KDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIANHEAYMKRNAKK 406 (423)
Q Consensus 335 ~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~i~~~~~~Stt~Ii~RI~~~~~~y~~r~~~k 406 (423)
.+++++++||++++|+||..+ ..+.++|..++.+|++.++++++++|||.|++||+.+++.|++||...
T Consensus 81 ~~~i~~~~~d~vv~G~d~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~Stt~ii~rI~~~~~~~~~r~~~~ 149 (150)
T cd02174 81 PEFLDKYKCDYVAHGDDIYLD---ADGEDCYQEVKDAGRFKEVKRTEGVSTTDLIGRILLDYRDYHRRNLQR 149 (150)
T ss_pred HHHHHHhCCCEEEECCCCCCC---CCchhHHHHHHhCCEEEEeCCCCCCCHHHHHHHHHHhHHHHHHhhhcc
Confidence 999999999999999999764 234678889999999999999999999999999999999999999864
No 7
>COG0615 TagD Cytidylyltransferase [Cell envelope biogenesis, outer membrane / Lipid metabolism]
Probab=99.97 E-value=4.2e-31 Score=231.06 Aligned_cols=132 Identities=35% Similarity=0.654 Sum_probs=118.6
Q ss_pred eEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhhcccCeeEEcCCCCchHH
Q 014503 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKD 336 (423)
Q Consensus 257 ~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~~~Vd~Vvi~~p~~~~~~ 336 (423)
+.|+++||||+||+||+++|++||++||+|+|.+..|+.+...|++ .|+|+.+||++++.+|+|||+|++++||+.+.+
T Consensus 2 ~rV~~~GtFDilH~GHi~~L~~Ak~lGd~liVv~a~de~~~~~~k~-~pi~~~~qR~evl~s~ryVD~vi~~~p~~~~~~ 80 (140)
T COG0615 2 KRVWADGTFDILHPGHIEFLRQAKKLGDELIVVVARDETVIKRKKR-KPIMPEEQRAEVLESLRYVDEVILGAPWDIKFE 80 (140)
T ss_pred cEEEEeeEEEEechhHHHHHHHHHHhCCeEEEEEeccHHHHHhcCC-CCCCCHHHHHHHHHcCcchheeeeCCccccChH
Confidence 3499999999999999999999999999999999999998875554 699999999999999999999999999999889
Q ss_pred HHhhcCccEEEecCCcCCCCCCCCCCChHHHHHhCCeEEEeCCCCC------CCHHHHHHHHHh
Q 014503 337 MITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKS------ITTTSVAQRIIA 394 (423)
Q Consensus 337 ~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~i~~~~~------~Stt~Ii~RI~~ 394 (423)
++++++||++++|+||... .+.+.++..+ +|.+.++.|+++ .||+.|++||..
T Consensus 81 ~i~~~k~Div~lG~D~~~d----~~~l~~~~~k-~G~~~~v~R~~g~~~~~~~st~~i~~~i~~ 139 (140)
T COG0615 81 DIEEYKPDIVVLGDDQKFD----EDDLKYELVK-RGLFVEVKRTEGVSTCELISTSDIIKRILE 139 (140)
T ss_pred HHHHhCCCEEEECCCCcCC----hHHHHHHHHH-cCCeeEEEeccCcccCcccchHHHHHHHhc
Confidence 9999999999999998742 4556777777 999999999988 788899988864
No 8
>KOG2803 consensus Choline phosphate cytidylyltransferase/Predicted CDP-ethanolamine synthase [Lipid transport and metabolism]
Probab=99.97 E-value=1.6e-31 Score=257.19 Aligned_cols=134 Identities=31% Similarity=0.558 Sum_probs=127.2
Q ss_pred EEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhhcccCeeEEcCCCCchHHH
Q 014503 258 VVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDM 337 (423)
Q Consensus 258 iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~~~Vd~Vvi~~p~~~~~~~ 337 (423)
.||++||||++|.||.+.|+|||++||+|||||++|+.+..+||+ |+|+++||++++.+|||||+||.++|+..+.++
T Consensus 10 rVw~DGCfDm~HyGHanaLrQAkalGdkLivGVHsDeeI~~nKGp--PV~t~eERy~~v~~ikWVDEVV~~APyvtt~~~ 87 (358)
T KOG2803|consen 10 RVWADGCFDMVHYGHANALRQAKALGDKLIVGVHSDEEITLNKGP--PVFTDEERYEMVKAIKWVDEVVEGAPYVTTLEW 87 (358)
T ss_pred eEEeccchhhhhhhhhHHHHHHHHhCCeEEEEecchHHHHhcCCC--CcccHHHHHHHHhhcchhhhhhcCCCeeccHHH
Confidence 599999999999999999999999999999999999999999997 999999999999999999999999999999999
Q ss_pred HhhcCccEEEecCCcCCCCCCCCCCChHHHHHhCCeEEEeCCCCCCCHHHHHHHHHhch
Q 014503 338 ITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIANH 396 (423)
Q Consensus 338 i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~i~~~~~~Stt~Ii~RI~~~~ 396 (423)
++++++|++|||+|... ++.+.|.|...|.+|++.+++||.++|||+|+.|++.-.
T Consensus 88 md~y~cd~vvHGdDit~---~a~G~D~Y~~vK~agrykevKRT~GVSTTelvgRmll~~ 143 (358)
T KOG2803|consen 88 MDKYGCDYVVHGDDITL---DADGLDCYRLVKAAGRYKEVKRTEGVSTTELVGRMLLKK 143 (358)
T ss_pred HHHhCCeEEEeCCccee---cCCCccHHHHHHHhcchheeeeccCcchhhhhhHhhhhc
Confidence 99999999999998644 367899999999999999999999999999999986543
No 9
>KOG2804 consensus Phosphorylcholine transferase/cholinephosphate cytidylyltransferase [Lipid transport and metabolism]
Probab=99.97 E-value=2.3e-31 Score=254.77 Aligned_cols=146 Identities=33% Similarity=0.664 Sum_probs=137.4
Q ss_pred eEEEEcCeeccCCHHHHHHHHHHHhcC--CEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhhcccCeeEEcCCCCch
Q 014503 257 RVVYIDGAFDLFHAGHVEILKKARQLG--DFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVT 334 (423)
Q Consensus 257 ~iv~~~G~FDl~H~GHi~~L~~A~~~g--d~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~~~Vd~Vvi~~p~~~~ 334 (423)
-.||.+|.|||||.||.+.|+|||+++ -+|||||.+|+...++|| +.+|+.+||++.|..|||||+||.++||.++
T Consensus 64 VRVYADGIyDLFH~GHarqL~QaK~~FPNvyLiVGvc~De~Thk~KG--~TVm~e~ERyE~lrHCryVDEVi~~APW~lt 141 (348)
T KOG2804|consen 64 VRVYADGIYDLFHYGHARQLEQAKKLFPNVYLIVGVCSDELTHKFKG--RTVMNENERYEALRHCRYVDEVIPNAPWTLT 141 (348)
T ss_pred eEEEccchHHHhhhhHHHHHHHHHHhCCCeEEEEeecCchhhhhccC--ceecChHHHHHHhhhhhhhhhhccCCCcccc
Confidence 469999999999999999999999988 699999999999999999 5999999999999999999999999999999
Q ss_pred HHHHhhcCccEEEecCCcCCCCCCCCCCChHHHHHhCCeEEEeCCCCCCCHHHHHHHHHhchHhHHHHHhhhh
Q 014503 335 KDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIANHEAYMKRNAKKA 407 (423)
Q Consensus 335 ~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~i~~~~~~Stt~Ii~RI~~~~~~y~~r~~~k~ 407 (423)
.+||++++||+|.|.+..... .+.+|.|+..|.+|.|....||.++||++||-||+..++.|..||..+.
T Consensus 142 ~EFL~~HKIDfVAHDdIPY~s---~gsdDiY~~vK~~G~F~~T~RTeGvSTSDiI~rIVrDYD~YvrRNL~RG 211 (348)
T KOG2804|consen 142 PEFLEKHKIDFVAHDDIPYVS---AGSDDIYKPVKEAGMFLPTQRTEGVSTSDIITRIVRDYDVYVRRNLARG 211 (348)
T ss_pred HHHHHhcccceeeccCccccC---CCchhHHHHHHHhcccccccccCCccHHHHHHHHHHhHHHHHHhhhccc
Confidence 999999999999999876553 4567999999999999999999999999999999999999999997763
No 10
>cd02174 CCT CTP:phosphocholine cytidylyltransferase. CTP:phosphocholine cytidylyltransferase (CCT) catalyzes the condensation of CTP and phosphocholine to form CDP-choline as the rate-limiting and regulatory step in the CDP-choline pathway. CCT is unique in that its enzymatic activity is regulated by the extent of its association with membrane structures. A current model posts that the elastic stress of the bilayer curvature is sensed by CCT and this governs the degree of membrane association, thus providing a mechanism for both positive and negative regulation of activity.
Probab=99.97 E-value=2.3e-30 Score=232.21 Aligned_cols=138 Identities=61% Similarity=1.009 Sum_probs=127.9
Q ss_pred CeEEEEecccCcCcHHHHHHHHHHHHhc--CeeEEEEecchhhhccCCCCCCcHHHHHHHHhcCccccEEEecCCccccH
Q 014503 65 RVRVYMDGCFDLMHYGHANALRQAKALG--DELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITE 142 (423)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~~--d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~~VD~vi~~~p~~~~~ 142 (423)
++|||+.|+||++|.||+++|++|+++| +.|+|||++|+.+..+|++|+++++||.+++++|+|||+|+++.|+..+.
T Consensus 2 ~~rV~~~G~FDl~H~GHi~~L~~A~~lg~~d~LiVgV~sD~~~~~~k~~pi~~~~eR~~~l~~~~~Vd~Vi~~~~~~~~~ 81 (150)
T cd02174 2 PVRVYVDGCFDLFHYGHANALRQAKKLGPNDYLIVGVHSDEEIHKHKGPPVMTEEERYEAVRHCKWVDEVVEGAPYVTTP 81 (150)
T ss_pred CeEEEEeCccCCCCHHHHHHHHHHHHhCCCCEEEEEEecCHHHhhcCCCCcCCHHHHHHHHHhcCCCCeEEECCCCCChH
Confidence 5789999999999999999999999999 99999999999988788889999999999999999999999999988888
Q ss_pred HHHHHHHhhcCccEEEEcCCCCCCCCCCcHHHHHHhCCcEEEeccCCCCCHHHHHHHHHhcccc
Q 014503 143 QFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSSMED 206 (423)
Q Consensus 143 efl~~ll~~~~~d~VV~G~D~~~g~~g~~~~~~lk~~g~~~~v~r~~~iSST~Ir~rI~~~~~~ 206 (423)
+|++ +++||++++|+||..+..+.+.|+.+++.|+++.+++++++|||.|++||++....
T Consensus 82 ~~i~----~~~~d~vv~G~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~Stt~ii~rI~~~~~~ 141 (150)
T cd02174 82 EFLD----KYKCDYVAHGDDIYLDADGEDCYQEVKDAGRFKEVKRTEGVSTTDLIGRILLDYRD 141 (150)
T ss_pred HHHH----HhCCCEEEECCCCCCCCCchhHHHHHHhCCEEEEeCCCCCCCHHHHHHHHHHhHHH
Confidence 8874 68999999999998877777889999999999999999999999999999976543
No 11
>PLN02413 choline-phosphate cytidylyltransferase
Probab=99.96 E-value=2.1e-29 Score=242.63 Aligned_cols=141 Identities=43% Similarity=0.767 Sum_probs=127.3
Q ss_pred CCCCCeEEEEecccCcCcHHHHHHHHHHHHhc--CeeEEEEecchhhhccCCCCCCcHHHHHHHHhcCccccEEEecCCc
Q 014503 61 GKKKRVRVYMDGCFDLMHYGHANALRQAKALG--DELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPY 138 (423)
Q Consensus 61 ~~~~~~~V~~~G~FD~lH~GH~~lL~qA~~~~--d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~~VD~vi~~~p~ 138 (423)
...++++||++||||++|.||+++|++|+++| +.|+|||++|+.+...|++|+|+++||+++|++|+|||+|++++||
T Consensus 23 ~~~r~~rVyvdG~FDLfH~GHir~L~qAK~lg~~d~LIVGV~sDe~v~~~KGrPIm~~~ER~e~V~acKyVDeVV~~aP~ 102 (294)
T PLN02413 23 PSDRPVRVYADGIYDLFHFGHARSLEQAKKLFPNTYLLVGCCNDELTHKYKGKTVMTEDERYESLRHCKWVDEVIPDAPW 102 (294)
T ss_pred CCCCceEEEEeCchhhCCHHHHHHHHHHHHhCCCCEEEEEecccHHHHhcCCCCCCCHHHHHHHHHhcccccEEeeCCCc
Confidence 44668899999999999999999999999996 7999999999999889999999999999999999999999999999
Q ss_pred cccHHHHHHHHhhcCccEEEEcCCCCCC--CCCCcHHHHHHhCCcEEEeccCCCCCHHHHHHHHHhccc
Q 014503 139 AITEQFMNRLFNEHKIDYIIHGDDPCLL--PDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSSME 205 (423)
Q Consensus 139 ~~~~efl~~ll~~~~~d~VV~G~D~~~g--~~g~~~~~~lk~~g~~~~v~r~~~iSST~Ir~rI~~~~~ 205 (423)
..+.+|++ +++||+||||++.... ..+.+.|..+++.|++..+++++++|||+|++||+....
T Consensus 103 ~~t~efI~----~~kpDiVvhGd~~~~d~~~~g~D~Y~~vK~~G~f~~i~Rt~gvSTTdII~RIlk~y~ 167 (294)
T PLN02413 103 VITQEFLD----KHRIDYVAHDALPYADASGAGKDVYEFVKKIGKFKETKRTDGISTSDIIMRIVKDYN 167 (294)
T ss_pred cccHHHHH----HhCCCEEEECCCCCccccccCchhHHHHHHCCeEEEecCCCCcCHHHHHHHHHHHHH
Confidence 99999985 6799999999854332 245678999999999999999999999999999997643
No 12
>COG0615 TagD Cytidylyltransferase [Cell envelope biogenesis, outer membrane / Lipid metabolism]
Probab=99.96 E-value=1.4e-29 Score=221.59 Aligned_cols=131 Identities=44% Similarity=0.724 Sum_probs=116.8
Q ss_pred eEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhc-cCCCCCCcHHHHHHHHhcCccccEEEecCCccccHHH
Q 014503 66 VRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIA-NKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQF 144 (423)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~-~K~~pi~t~eER~~~l~~~~~VD~vi~~~p~~~~~ef 144 (423)
++||++||||.+|+||+++|+||+++|++++|.+.+|+.+.. .|++|+++++||++++++|+|||+|++++||+++.++
T Consensus 2 ~rV~~~GtFDilH~GHi~~L~~Ak~lGd~liVv~a~de~~~~~~k~~pi~~~~qR~evl~s~ryVD~vi~~~p~~~~~~~ 81 (140)
T COG0615 2 KRVWADGTFDILHPGHIEFLRQAKKLGDELIVVVARDETVIKRKKRKPIMPEEQRAEVLESLRYVDEVILGAPWDIKFED 81 (140)
T ss_pred cEEEEeeEEEEechhHHHHHHHHHHhCCeEEEEEeccHHHHHhcCCCCCCCHHHHHHHHHcCcchheeeeCCccccChHH
Confidence 579999999999999999999999999999999999998765 6669999999999999999999999999999998888
Q ss_pred HHHHHhhcCccEEEEcCCCCCCCCCCcHHHHHHhCCcEEEeccCCC------CCHHHHHHHHHh
Q 014503 145 MNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRTEG------VSSTDIVGRILS 202 (423)
Q Consensus 145 l~~ll~~~~~d~VV~G~D~~~g~~g~~~~~~lk~~g~~~~v~r~~~------iSST~Ir~rI~~ 202 (423)
++ +++||+|++|+||+ +..+...+.+.+ .|.+.+++|+++ +||++|.+++..
T Consensus 82 i~----~~k~Div~lG~D~~-~d~~~l~~~~~k-~G~~~~v~R~~g~~~~~~~st~~i~~~i~~ 139 (140)
T COG0615 82 IE----EYKPDIVVLGDDQK-FDEDDLKYELVK-RGLFVEVKRTEGVSTCELISTSDIIKRILE 139 (140)
T ss_pred HH----HhCCCEEEECCCCc-CChHHHHHHHHH-cCCeeEEEeccCcccCcccchHHHHHHHhc
Confidence 74 78999999999999 545555565555 999999999987 899999998863
No 13
>PLN02406 ethanolamine-phosphate cytidylyltransferase
Probab=99.96 E-value=2.2e-29 Score=256.54 Aligned_cols=135 Identities=33% Similarity=0.667 Sum_probs=124.3
Q ss_pred CCeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhhcccCeeEEcCCCCch
Q 014503 255 NARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVT 334 (423)
Q Consensus 255 ~~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~~~Vd~Vvi~~p~~~~ 334 (423)
....||++||||++|.||+++|++|+++||+|||||++|+++.++||+ |+|+++||++++++|+|||+|++++|+.++
T Consensus 52 ~~~rV~~~G~FDllH~GH~~~L~qAk~lGd~LIVGV~SDe~i~~~Kg~--PV~~~eER~~~v~alk~VD~Vv~~apy~~~ 129 (418)
T PLN02406 52 KPVRVYMDGCFDMMHYGHANALRQARALGDELVVGVVSDEEIIANKGP--PVTPMHERMIMVSGVKWVDEVIPDAPYAIT 129 (418)
T ss_pred CceEEEEcCeeCCCCHHHHHHHHHHHHhCCEEEEEEecChhhhccCCC--CcCCHHHHHHHHHhcCCCceEEeCCccccc
Confidence 457799999999999999999999999999999999999999999984 999999999999999999999999998877
Q ss_pred HHHH----hhcCccEEEecCCcCCCCCCCCCCChHHHHHhCCeEEEeCCCCCCCHHHHHHHHHh
Q 014503 335 KDMI----TTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIA 394 (423)
Q Consensus 335 ~~~i----~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~i~~~~~~Stt~Ii~RI~~ 394 (423)
.+++ ++++||++|||+||... +.+.|.|.+.+.+|++.++++++++|||+|+.||+.
T Consensus 130 ~d~~~~li~~~~~D~vVhGdD~~~~---~~g~d~y~~~k~~Gr~~~i~rt~GvSTTdIv~Ril~ 190 (418)
T PLN02406 130 EEFMNKLFNEYNIDYIIHGDDPCLL---PDGTDAYALAKKAGRYKQIKRTEGVSSTDIVGRMLL 190 (418)
T ss_pred hHHHHHHHHHhCCCEEEECCCcccc---CCchHHHHHHHhCCEEEEEecCCCCCHHHHHHHHHH
Confidence 7766 58999999999998642 456788999999999999999999999999999975
No 14
>cd02173 ECT CTP:phosphoethanolamine cytidylyltransferase (ECT). CTP:phosphoethanolamine cytidylyltransferase (ECT) catalyzes the conversion of phosphoethanolamine to CDP-ethanolamine as part of the CDP-ethanolamine biosynthesis pathway. ECT expression in hepatocytes is localized predominantly to areas of the cytoplasm that are rich in rough endoplasmic reticulum. Several ECTs, including yeast and human ECT, have large repetitive sequences located within their N- and C-termini.
Probab=99.95 E-value=8.8e-28 Score=215.97 Aligned_cols=135 Identities=40% Similarity=0.723 Sum_probs=122.8
Q ss_pred CeEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCC--CCCCcHHHHHHHHhcCccccEEEecCCccccH
Q 014503 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKG--PPVLSMEERLALVSGLKWVDEVIANAPYAITE 142 (423)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~--~pi~t~eER~~~l~~~~~VD~vi~~~p~~~~~ 142 (423)
.++||+.|+||++|.||+++|++|+++|+.|+|||++|+.+...|+ +|+++++||++++++|+|||.|++..|+.++.
T Consensus 2 ~~iv~~~G~FD~~H~GHi~~L~~A~~lgd~liVgV~~D~~~~~~K~~~~pi~~~~eR~~~v~~~~~Vd~V~v~~~~~~~~ 81 (152)
T cd02173 2 DKVVYVDGAFDLFHIGHIEFLEKARELGDYLIVGVHDDQTVNEYKGSNYPIMNLHERVLSVLACRYVDEVVIGAPYVITK 81 (152)
T ss_pred CeEEEEcCcccCCCHHHHHHHHHHHHcCCEEEEEEeCcHHHHhhcCCCCCCCCHHHHHHHHHhcCCCCEEEECCCCcchH
Confidence 4689999999999999999999999999999999999999887776 69999999999999999999999988887777
Q ss_pred HHHHHHHhhcCccEEEEcCCCCCC--CCCCcHHHHHHhCCcEEEeccCCCCCHHHHHHHHHhc
Q 014503 143 QFMNRLFNEHKIDYIIHGDDPCLL--PDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSS 203 (423)
Q Consensus 143 efl~~ll~~~~~d~VV~G~D~~~g--~~g~~~~~~lk~~g~~~~v~r~~~iSST~Ir~rI~~~ 203 (423)
+|+ ++++||++++|.||... ..+.+.|..++..|.+..+++++++|||+|++||++.
T Consensus 82 ~~~----~~~~~d~vv~G~d~~~~~~~~~~~~~~~~~~~G~~~~v~~~~~~Sts~Ii~rI~~~ 140 (152)
T cd02173 82 ELI----EHFKIDVVVHGKTEETPDSLDGEDPYAVPKEMGIFKEIDSGSDLTTRDIVNRIIKN 140 (152)
T ss_pred HHH----HHhCCCEEEECCCCccccccCchHHHHHHHhCCeEEEecCCCCCCHHHHHHHHHHh
Confidence 776 47899999999999754 2456779999999999999999999999999999854
No 15
>KOG2804 consensus Phosphorylcholine transferase/cholinephosphate cytidylyltransferase [Lipid transport and metabolism]
Probab=99.95 E-value=2e-28 Score=234.58 Aligned_cols=140 Identities=44% Similarity=0.712 Sum_probs=130.1
Q ss_pred CCCCeEEEEecccCcCcHHHHHHHHHHHHhc--CeeEEEEecchhhhccCCCCCCcHHHHHHHHhcCccccEEEecCCcc
Q 014503 62 KKKRVRVYMDGCFDLMHYGHANALRQAKALG--DELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPYA 139 (423)
Q Consensus 62 ~~~~~~V~~~G~FD~lH~GH~~lL~qA~~~~--d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~~VD~vi~~~p~~ 139 (423)
..++.|||++|.||++|+||++.|+||+++. -+|+|||.+|+...+.||..+|+..||++.|++|+|||+|+.++||.
T Consensus 60 ~~RPVRVYADGIyDLFH~GHarqL~QaK~~FPNvyLiVGvc~De~Thk~KG~TVm~e~ERyE~lrHCryVDEVi~~APW~ 139 (348)
T KOG2804|consen 60 TDRPVRVYADGIYDLFHYGHARQLEQAKKLFPNVYLIVGVCSDELTHKFKGRTVMNENERYEALRHCRYVDEVIPNAPWT 139 (348)
T ss_pred CCCceEEEccchHHHhhhhHHHHHHHHHHhCCCeEEEEeecCchhhhhccCceecChHHHHHHhhhhhhhhhhccCCCcc
Confidence 5788999999999999999999999999997 68999999999988999999999999999999999999999999999
Q ss_pred ccHHHHHHHHhhcCccEEEEcCCCCCCCCCCcHHHHHHhCCcEEEeccCCCCCHHHHHHHHHhccc
Q 014503 140 ITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSSME 205 (423)
Q Consensus 140 ~~~efl~~ll~~~~~d~VV~G~D~~~g~~g~~~~~~lk~~g~~~~v~r~~~iSST~Ir~rI~~~~~ 205 (423)
++++||+ ++++|+|.|.+-+....+..|.|..+|+.|++++..||+||||++|+-||...+-
T Consensus 140 lt~EFL~----~HKIDfVAHDdIPY~s~gsdDiY~~vK~~G~F~~T~RTeGvSTSDiI~rIVrDYD 201 (348)
T KOG2804|consen 140 LTPEFLE----KHKIDFVAHDDIPYVSAGSDDIYKPVKEAGMFLPTQRTEGVSTSDIITRIVRDYD 201 (348)
T ss_pred ccHHHHH----hcccceeeccCccccCCCchhHHHHHHHhcccccccccCCccHHHHHHHHHHhHH
Confidence 9999985 7899999999887666666678999999999999999999999999999986543
No 16
>PTZ00308 ethanolamine-phosphate cytidylyltransferase; Provisional
Probab=99.95 E-value=1.6e-27 Score=240.38 Aligned_cols=140 Identities=31% Similarity=0.601 Sum_probs=128.2
Q ss_pred CCCCCeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhhcccCeeEEcCCC
Q 014503 252 PGPNARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPW 331 (423)
Q Consensus 252 ~~~~~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~~~Vd~Vvi~~p~ 331 (423)
..++.++||++|+||++|.||+.+|++|+++||.|+||+++|+.+.+.||+ |+|+++||++++++|+|||+|+++.|+
T Consensus 7 ~~~~~~~v~~~G~FD~vH~GH~~~L~qAk~~g~~Livgv~~d~~i~~~K~~--pi~~~eeR~~~l~~~~~VD~Vv~~~p~ 84 (353)
T PTZ00308 7 KKPGTIRVWVDGCFDMLHFGHANALRQARALGDELFVGCHSDEEIMRNKGP--PVMHQEERYEALRACKWVDEVVEGYPY 84 (353)
T ss_pred CCCCcEEEEEEeecccCCHHHHHHHHHHHHhCCEEEEEeCCHHHHhhcCCC--CCCCHHHHHHHHHhcCCccEEEECCCC
Confidence 345668999999999999999999999999999999999999999988885 899999999999999999999998888
Q ss_pred CchHHHHhhcCccEEEecCCcCCCCCCCCCCChHHHHHhCCeEEEeCCCCCCCHHHHHHHHHhch
Q 014503 332 EVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIANH 396 (423)
Q Consensus 332 ~~~~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~i~~~~~~Stt~Ii~RI~~~~ 396 (423)
..+.+++++++||++|+|+||..+ ..+.+.|..++..|++.++++++++|||+|++||+...
T Consensus 85 ~~~~~fI~~l~~d~vv~GdD~~~g---~~g~~~~~~lk~~G~~~~v~rt~g~STt~ii~ril~~~ 146 (353)
T PTZ00308 85 TTRLEDLERLECDFVVHGDDISVD---LNGRNSYQEIIDAGKFKVVKRTEGISTTDLVGRMLLCT 146 (353)
T ss_pred CchHHHHHHhCCCEEEECCCCCCC---CCccchHHHHHhCCeEEEEecCCCCCHHHHHHHHHHhh
Confidence 888889999999999999998664 34567788999999999999999999999999998543
No 17
>cd02172 RfaE_N N-terminal domain of RfaE. RfaE is a protein involved in the biosynthesis of ADP-L-glycero-D-manno-heptose, a precursor for LPS inner core biosynthesis. RfaE is a bifunctional protein in Escherichia coli, and separate proteins in other organisms. Domain I is suggested to act in D-glycero-D-manno-heptose 1-phosphate biosynthesis, while domain II (this family) adds ADP to yield ADP-D-glycero-D-manno-heptose .
Probab=99.95 E-value=1.2e-26 Score=206.92 Aligned_cols=134 Identities=25% Similarity=0.367 Sum_probs=116.8
Q ss_pred CeEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhcCccccEEEecCCccccHHH
Q 014503 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQF 144 (423)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~~VD~vi~~~p~~~~~ef 144 (423)
.++|+++|+||++|.||+++|++|+++++.++|++++|+.+.+.+++|++|.+||.+++++++|||.++. .|+...++|
T Consensus 4 ~~~vv~~G~FDgvH~GH~~ll~~a~~~~~~~vv~~~~d~~~~~~~~~~i~~~~eR~~~l~~lg~VD~vi~-~~~~~~~~f 82 (144)
T cd02172 4 KTVVLCHGVFDLLHPGHVRHLQAARSLGDILVVSLTSDRYVNKGPGRPIFPEDLRAEVLAALGFVDYVVL-FDNPTALEI 82 (144)
T ss_pred CEEEEEecccCCCCHHHHHHHHHHHHhCCeEEEEEeChHHhccCCCCCCCCHHHHHHHHHccCCccEEEE-CCCCCHHHH
Confidence 4689999999999999999999999999999999999987765555899999999999999988999998 455555777
Q ss_pred HHHHHhhcCccEEEEcCCCCCCCCC-----CcHHHHHHhCCcEEEeccCCCCCHHHHHHHHHhc
Q 014503 145 MNRLFNEHKIDYIIHGDDPCLLPDG-----TDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSS 203 (423)
Q Consensus 145 l~~ll~~~~~d~VV~G~D~~~g~~g-----~~~~~~lk~~g~~~~v~r~~~iSST~Ir~rI~~~ 203 (423)
++ ++++++||+|+||+||.++ .+.++.+++.|....+.+++++|||+|++||+..
T Consensus 83 i~----~l~~~~vv~G~d~~fg~~~~~~~~~g~~~~l~~~g~~~~~~~~~~~sts~li~~i~~~ 142 (144)
T cd02172 83 ID----ALQPNIYVKGGDYENPENDVTGKIAPEAEAVKAYGGKIVFTGEIVFSSSALINRIFDE 142 (144)
T ss_pred HH----HhCCCEEEECCCcccCccccccchhhhHHHHHHhCCEEEEecCCCcchHHHHHHHHhh
Confidence 75 6899999999999999875 6778889888765444499999999999999754
No 18
>cd02170 cytidylyltransferase cytidylyltransferase. The cytidylyltransferase family includes cholinephosphate cytidylyltransferase (CCT), glycerol-3-phosphate cytidylyltransferase, RafE and phosphoethanolamine cytidylyltransferase (ECT). All enzymes catalyze the transfer of a cytidylyl group from CTP to various substrates.
Probab=99.94 E-value=2.2e-26 Score=202.76 Aligned_cols=133 Identities=44% Similarity=0.675 Sum_probs=118.5
Q ss_pred CeEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhcCccccEEEecCCccccHHH
Q 014503 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQF 144 (423)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~~VD~vi~~~p~~~~~ef 144 (423)
+++|+++|+||++|.||+.+|++|+++++.++|++++|+.+.+.|++|+++.+||.+++++|+|||.++...|++ |
T Consensus 1 ~~~v~~~G~FD~~H~GH~~ll~~a~~~~~~l~v~v~~~~~~~~~~~~~~~~~~eR~~~l~~~~~vd~v~~~~~~~----~ 76 (136)
T cd02170 1 MKRVYAAGTFDIIHPGHIRFLEEAKKLGDYLIVGVARDETVAKIKRRPILPEEQRAEVVEALKYVDEVILGHPWS----Y 76 (136)
T ss_pred CeEEEEcCccCCCCHHHHHHHHHHHHhCCEEEEEECCcHHHHhcCCCCCCCHHHHHHHHHcCCCcCEEEECCCCC----H
Confidence 468999999999999999999999999999999999998776666679999999999999999999999877764 4
Q ss_pred HHHHHhhcCccEEEEcCCCCCCCCCCcHHHHHHhCCcEEEec--cCCCCCHHHHHHHHHh
Q 014503 145 MNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYKQIK--RTEGVSSTDIVGRILS 202 (423)
Q Consensus 145 l~~ll~~~~~d~VV~G~D~~~g~~g~~~~~~lk~~g~~~~v~--r~~~iSST~Ir~rI~~ 202 (423)
++.+ .+++|+++|+|+||+||.++.+.++.+++.|..+.+. .+.++|||.||++|+.
T Consensus 77 ~~~l-~~~~~~~vv~G~d~~fg~~~~~~~~~l~~~g~~~~~~~~~~~~vSSt~Ir~~i~~ 135 (136)
T cd02170 77 FKPL-EELKPDVIVLGDDQKNGVDEEEVYEELKKRGKVIEVPRKKTEGISSSDIIKRILE 135 (136)
T ss_pred hHHH-HHHCCCEEEECCCCCCCCcchhHHHHHHHCCeEEEECCCCCCCCcHHHHHHHHHh
Confidence 4433 4578999999999999999999999999999988888 7788999999999963
No 19
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.94 E-value=5.4e-27 Score=233.45 Aligned_cols=136 Identities=29% Similarity=0.424 Sum_probs=123.5
Q ss_pred CCeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhhcccCeeEEcCCCCch
Q 014503 255 NARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVT 334 (423)
Q Consensus 255 ~~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~~~Vd~Vvi~~p~~~~ 334 (423)
..++|+++||||++|.||+.+|.+||++||.||||++||.++++.||..|||.+++.|+.++.++..||.|++++. +++
T Consensus 331 ~~~vvfTNGcFDIlH~GHvsyL~~Ar~lgd~Livg~NsDaSvkrLKG~~RPin~~~~Ra~vLa~L~~VD~vV~F~e-dTP 409 (467)
T COG2870 331 GKKVVFTNGCFDILHAGHVTYLAQARALGDRLIVGVNSDASVKRLKGESRPINSEEDRAAVLAALESVDLVVIFDE-DTP 409 (467)
T ss_pred cCeEEEecchhhhccccHHHHHHHHHhhCCeEEEEeccchhhhhhcCCCCCCCcHHHHHHHHhhcccceEEEEecC-CCH
Confidence 3569999999999999999999999999999999999999999999999999999999999999999999999984 567
Q ss_pred HHHHhhcCccEEEecCCcCCCCCCCCCCChHHHHHhCCeEEEeCCCCCCCHHHHHHHHHhc
Q 014503 335 KDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIAN 395 (423)
Q Consensus 335 ~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~i~~~~~~Stt~Ii~RI~~~ 395 (423)
.++|+.++||++|+|.||..... -+. ..+..++|....++...+.|||.||++|...
T Consensus 410 ~~LI~~~~PdilVKGgDy~~~~i--~g~--~~v~~~GG~v~~i~f~~g~STt~ii~ki~~~ 466 (467)
T COG2870 410 EELIEAVKPDILVKGGDYKIEKI--VGA--DIVEAYGGEVLLIPFEEGKSTTKIIEKIRAK 466 (467)
T ss_pred HHHHHHhCcceEEccCCCChhhc--cch--hhhhhcCCeEEEEecccCCcHHHHHHHHhcc
Confidence 89999999999999999977654 222 2456789999999999999999999999653
No 20
>TIGR02199 rfaE_dom_II rfaE bifunctional protein, domain II. RfaE is a protein involved in the biosynthesis of ADP-L-glycero-D-manno-heptose, a precursor for LPS inner core biosynthesis. RfaE is a bifunctional protein in E. coli, and separate proteins in some other genome. Domain I (TIGR02198) is suggested to act in D-glycero-D-manno-heptose 1-phosphate biosynthesis, while domain II (this family) adds ADP to yield ADP-D-glycero-D-manno-heptose.
Probab=99.93 E-value=4.2e-25 Score=197.01 Aligned_cols=130 Identities=35% Similarity=0.528 Sum_probs=109.2
Q ss_pred CeEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCC--CCCCcHHHHHHHHhcCccccEEEecCCccccH
Q 014503 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKG--PPVLSMEERLALVSGLKWVDEVIANAPYAITE 142 (423)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~--~pi~t~eER~~~l~~~~~VD~vi~~~p~~~~~ 142 (423)
.++|+++|+||++|.||+++|++|+++|+.++|++++|+.....++ +|+++.+||.+++++|+|||+++...+. ..+
T Consensus 11 ~~~v~~~G~FDgvH~GH~~ll~~a~~~~~~~~v~v~~d~~~~~~k~~~~~l~~~eeR~~~l~~~~~VD~vi~f~~~-~~~ 89 (144)
T TIGR02199 11 KKIVFTNGCFDILHAGHVSYLQQARALGDRLVVGVNSDASVKRLKGETRPINPEEDRAEVLAALSSVDYVVIFDED-TPE 89 (144)
T ss_pred CCEEEEeCcccccCHHHHHHHHHHHHhCCccEEEEECCcCHHHhCCCCCCcCCHHHHHHHHHhcCCCCEEEECCCC-CHH
Confidence 5689999999999999999999999999999999999997653444 6899999999999999999999984332 235
Q ss_pred HHHHHHHhhcCccEEEEcCCCCCCCCCCcHHHHHHhC-CcEEEeccCCCCCHHHHHHHHH
Q 014503 143 QFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKV-GRYKQIKRTEGVSSTDIVGRIL 201 (423)
Q Consensus 143 efl~~ll~~~~~d~VV~G~D~~~g~~g~~~~~~lk~~-g~~~~v~r~~~iSST~Ir~rI~ 201 (423)
+|++ +++++++|+|+||++... ..++.+++. |++..+++++++|||+||+||+
T Consensus 90 ~fi~----~l~~~~vv~G~d~~~~~~--~~~~~~~~~g~~v~~~~~~~~iSSs~Ir~ri~ 143 (144)
T TIGR02199 90 ELIG----ELKPDILVKGGDYKVETL--VGAELVESYGGQVVLLPFVEGRSTTAIIEKIL 143 (144)
T ss_pred HHHH----HhCCCEEEECCCCCCCcc--hhHHHHHHcCCEEEEEeCCCCcCHHHHHHHHh
Confidence 6764 689999999999988432 224556655 5899999999999999999996
No 21
>TIGR02199 rfaE_dom_II rfaE bifunctional protein, domain II. RfaE is a protein involved in the biosynthesis of ADP-L-glycero-D-manno-heptose, a precursor for LPS inner core biosynthesis. RfaE is a bifunctional protein in E. coli, and separate proteins in some other genome. Domain I (TIGR02198) is suggested to act in D-glycero-D-manno-heptose 1-phosphate biosynthesis, while domain II (this family) adds ADP to yield ADP-D-glycero-D-manno-heptose.
Probab=99.92 E-value=2.7e-24 Score=191.75 Aligned_cols=134 Identities=30% Similarity=0.437 Sum_probs=116.8
Q ss_pred CCeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhhcccCeeEEcCCCCch
Q 014503 255 NARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVT 334 (423)
Q Consensus 255 ~~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~~~Vd~Vvi~~p~~~~ 334 (423)
++++|++.|+||.+|.||..+|++|+++|+.++|||+.|+...++|+...|+++++||++++++|++||.|+++++. .+
T Consensus 10 ~~~~v~~~G~FDgvH~GH~~ll~~a~~~~~~~~v~v~~d~~~~~~k~~~~~l~~~eeR~~~l~~~~~VD~vi~f~~~-~~ 88 (144)
T TIGR02199 10 GKKIVFTNGCFDILHAGHVSYLQQARALGDRLVVGVNSDASVKRLKGETRPINPEEDRAEVLAALSSVDYVVIFDED-TP 88 (144)
T ss_pred CCCEEEEeCcccccCHHHHHHHHHHHHhCCccEEEEECCcCHHHhCCCCCCcCCHHHHHHHHHhcCCCCEEEECCCC-CH
Confidence 46899999999999999999999999999999999999999887777556999999999999999999999997654 46
Q ss_pred HHHHhhcCccEEEecCCcCCCCCCCCCCChHHHHH-hCCeEEEeCCCCCCCHHHHHHHHHh
Q 014503 335 KDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAK-SMGIFQLLESPKSITTTSVAQRIIA 394 (423)
Q Consensus 335 ~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k-~~G~~~~i~~~~~~Stt~Ii~RI~~ 394 (423)
+++++.++|+++|+|.||..+. ...++.++ .+|++.++++++++|||.|++||++
T Consensus 89 ~~fi~~l~~~~vv~G~d~~~~~-----~~~~~~~~~~g~~v~~~~~~~~iSSs~Ir~ri~~ 144 (144)
T TIGR02199 89 EELIGELKPDILVKGGDYKVET-----LVGAELVESYGGQVVLLPFVEGRSTTAIIEKILK 144 (144)
T ss_pred HHHHHHhCCCEEEECCCCCCCc-----chhHHHHHHcCCEEEEEeCCCCcCHHHHHHHHhC
Confidence 8999999999999999986542 12234445 4569999999999999999999963
No 22
>TIGR01518 g3p_cytidyltrns glycerol-3-phosphate cytidylyltransferase. Glycerol-3-phosphate cytidyltransferase acts in pathways of teichoic acid biosynthesis. Teichoic acids are substituted polymers, linked by phosphodiester bonds, of glycerol, ribitol, etc. An example is poly(glycerol phosphate), the major teichoic acid of the Bacillus subtilis cell wall. Most but not all species encoding proteins in this family are Gram-positive bacteria.
Probab=99.92 E-value=1.8e-24 Score=188.15 Aligned_cols=123 Identities=35% Similarity=0.508 Sum_probs=102.2
Q ss_pred EEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhcCccccEEEecCCccccHHHHHH
Q 014503 68 VYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQFMNR 147 (423)
Q Consensus 68 V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~~VD~vi~~~p~~~~~efl~~ 147 (423)
|++.|+||++|.||+++|++|+++|+.++|++++|+.....+++|+++.+||++++++|+|||.++...|+ ++|++.
T Consensus 1 v~~~G~FDg~H~GH~~~l~~a~~~~~~~iv~v~~d~~~~~~~~~~i~~~eeR~~~l~~~~~Vd~vi~~~~~---~~f~~~ 77 (125)
T TIGR01518 1 VLTYGTFDLLHWGHINLLERAKQLGDYLIVALSTDEFNLQKQKKAYHSYEHRKLILETIRYVDLVIPEKSW---EQKKQD 77 (125)
T ss_pred CEEcceeCCCCHHHHHHHHHHHHcCCEEEEEEechHHHhhcCCCCCCCHHHHHHHHHcCCCccEEecCCCc---cchHHH
Confidence 57899999999999999999999999999999999866544558999999999999999999999775554 345544
Q ss_pred HHhhcCccEEEEcCCCCCCCCCCcHHHHHHhC--CcEEEeccCCCCCHHHHHHHH
Q 014503 148 LFNEHKIDYIIHGDDPCLLPDGTDAYALAKKV--GRYKQIKRTEGVSSTDIVGRI 200 (423)
Q Consensus 148 ll~~~~~d~VV~G~D~~~g~~g~~~~~~lk~~--g~~~~v~r~~~iSST~Ir~rI 200 (423)
+ ++++||++++|+||. ++++.++.. .++..+++++++|||.||+.|
T Consensus 78 l-~~~~~~~vv~G~D~~------g~~~~l~~~~~~~v~~v~~~~~vSST~Ir~~~ 125 (125)
T TIGR01518 78 I-IDFNIDVFVMGDDWE------GKFDFLKDECPLKVVYLPRTEGVSTTKIKKEI 125 (125)
T ss_pred H-HHcCCCEEEECCCcc------chHHHHhhccCcEEEEeCCCCCccHHHHHhhC
Confidence 3 689999999999992 445566544 357788888999999999864
No 23
>cd02171 G3P_Cytidylyltransferase glycerol-3-phosphate cytidylyltransferase. Glycerol-3-phosphate cytidylyltransferase,(CDP-glycerol pyrophosphorylase). Glycerol-3-phosphate cytidyltransferase acts in pathways of teichoic acid biosynthesis. Teichoic acids are substituted polymers, linked by phosphodiester bonds, of glycerol, ribitol, etc. An example is poly(glycerol phosphate), the major teichoic acid of the Bacillus subtilis cell wall. Most, but not all, species encoding proteins in this family are Gram-positive bacteria. A closely related protein assigned a different function experimentally is a human ethanolamine-phosphate cytidylyltransferase.
Probab=99.92 E-value=3.9e-24 Score=186.73 Aligned_cols=128 Identities=32% Similarity=0.489 Sum_probs=107.9
Q ss_pred CeEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhcCccccEEEecCCccccHHH
Q 014503 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQF 144 (423)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~~VD~vi~~~p~~~~~ef 144 (423)
+++|+++|+||++|.||+.+|++|+++++++++++++|+.....+.++++|.+||++++++++|||+++...++ ++|
T Consensus 1 ~~~v~~~G~FDgvH~GH~~ll~~a~~~~~~l~v~v~~d~~~~~~~~~~~~~~~~R~~~l~~~~~vd~v~~~~~~---~~f 77 (129)
T cd02171 1 MKVVITYGTFDLLHIGHLNLLERAKALGDKLIVAVSTDEFNAGKGKKAVIPYEQRAEILESIRYVDLVIPETNW---EQK 77 (129)
T ss_pred CcEEEEeeeeccCCHHHHHHHHHHHHhCCEEEEEEeccHhHHhcCCCCCCCHHHHHHHHHcCCccCEEecCCCc---cCh
Confidence 45899999999999999999999999999999999998743322336899999999999999999999754333 345
Q ss_pred HHHHHhhcCccEEEEcCCCCCCCCCCcHHHHHHhCCcEEEeccCCCCCHHHHHHHHHh
Q 014503 145 MNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILS 202 (423)
Q Consensus 145 l~~ll~~~~~d~VV~G~D~~~g~~g~~~~~~lk~~g~~~~v~r~~~iSST~Ir~rI~~ 202 (423)
++.+ ++++++++++|+||. +.++.+++.+++..++++.++|||.||++|..
T Consensus 78 ~~~~-~~l~~~~vv~G~d~~------g~~~~l~~~~~v~~~~~~~~iSSt~Ir~~i~~ 128 (129)
T cd02171 78 IEDI-KKYNVDVFVMGDDWE------GKFDFLKEYCEVVYLPRTKGISSTQLKEMLKK 128 (129)
T ss_pred HHHH-HHhCCCEEEECCCCc------chHHHHHhCcEEEEeCCCCCcChHHHHHHHhh
Confidence 5443 678999999999992 46788999999999999889999999999863
No 24
>cd02172 RfaE_N N-terminal domain of RfaE. RfaE is a protein involved in the biosynthesis of ADP-L-glycero-D-manno-heptose, a precursor for LPS inner core biosynthesis. RfaE is a bifunctional protein in Escherichia coli, and separate proteins in other organisms. Domain I is suggested to act in D-glycero-D-manno-heptose 1-phosphate biosynthesis, while domain II (this family) adds ADP to yield ADP-D-glycero-D-manno-heptose .
Probab=99.91 E-value=2.2e-23 Score=185.93 Aligned_cols=138 Identities=25% Similarity=0.337 Sum_probs=114.5
Q ss_pred CCeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhhcccCeeEEcCCCCch
Q 014503 255 NARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVT 334 (423)
Q Consensus 255 ~~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~~~Vd~Vvi~~p~~~~ 334 (423)
++++|++.|+||++|.||..+|++|+++++.++|++++|+.++..+ .+|+++++||++++++|+|||.|++.+ ...+
T Consensus 3 ~~~~vv~~G~FDgvH~GH~~ll~~a~~~~~~~vv~~~~d~~~~~~~--~~~i~~~~eR~~~l~~lg~VD~vi~~~-~~~~ 79 (144)
T cd02172 3 GKTVVLCHGVFDLLHPGHVRHLQAARSLGDILVVSLTSDRYVNKGP--GRPIFPEDLRAEVLAALGFVDYVVLFD-NPTA 79 (144)
T ss_pred CCEEEEEecccCCCCHHHHHHHHHHHHhCCeEEEEEeChHHhccCC--CCCCCCHHHHHHHHHccCCccEEEECC-CCCH
Confidence 4688999999999999999999999999999999999998877544 379999999999999999999999874 4567
Q ss_pred HHHHhhcCccEEEecCCcCCCCCC---CCCCChHHHHHhCCeEEEeCCCCCCCHHHHHHHHHhch
Q 014503 335 KDMITTFNICLVVHGTVSETNTPL---TGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIANH 396 (423)
Q Consensus 335 ~~~i~~~~~d~vv~G~d~~~~~~~---~~~~d~~~~~k~~G~~~~i~~~~~~Stt~Ii~RI~~~~ 396 (423)
++++++++|+++|+|.||....-. ....+...+.+.++.+.+. ++.++|||+|++||+.+.
T Consensus 80 ~~fi~~l~~~~vv~G~d~~fg~~~~~~~~~g~~~~l~~~g~~~~~~-~~~~~sts~li~~i~~~~ 143 (144)
T cd02172 80 LEIIDALQPNIYVKGGDYENPENDVTGKIAPEAEAVKAYGGKIVFT-GEIVFSSSALINRIFDEL 143 (144)
T ss_pred HHHHHHhCCCEEEECCCcccCccccccchhhhHHHHHHhCCEEEEe-cCCCcchHHHHHHHHhhc
Confidence 899999999999999998654210 0012223344455666777 999999999999998775
No 25
>PRK11316 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; Provisional
Probab=99.90 E-value=2.5e-23 Score=218.21 Aligned_cols=135 Identities=28% Similarity=0.390 Sum_probs=122.1
Q ss_pred CCCeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhhcccCeeEEcCCCCc
Q 014503 254 PNARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEV 333 (423)
Q Consensus 254 ~~~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~~~Vd~Vvi~~p~~~ 333 (423)
.+.++|++.|+||++|.||+++|++|+++||+|+|||++|+.++..||.++|+++++||.+.+++|++||+|+.++ ...
T Consensus 338 ~~~~iv~~~G~fD~~H~GH~~~l~~a~~~~~~l~v~v~~d~~~~~~k~~~~pi~~~~~R~~~~~~~~~vd~v~~~~-~~~ 416 (473)
T PRK11316 338 RGEKIVMTNGCFDILHAGHVSYLANARKLGDRLIVAVNSDASVKRLKGEGRPVNPLEQRMAVLAALEAVDWVVPFE-EDT 416 (473)
T ss_pred cCCeEEEEecccccCCHHHHHHHHHHHHhCCeeEEEEeCchhHHHhCCCCCCCCCHHHHHHHHHhcCcCCEEEeCC-CCC
Confidence 3579999999999999999999999999999999999999999989997789999999999999999999999876 446
Q ss_pred hHHHHhhcCccEEEecCCcCCCCCCCCCCChHHHHHhCCeEEEeCCCCCCCHHHHHHHHH
Q 014503 334 TKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRII 393 (423)
Q Consensus 334 ~~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~i~~~~~~Stt~Ii~RI~ 393 (423)
+.+++++++||++++|+||..+.. ...+.+.+.+|+++++++++++|||+|++||.
T Consensus 417 ~~~~~~~~~~d~vv~G~d~~~~~~----~~~~~~~~~~~~~~~~~~~~~~st~~i~~ri~ 472 (473)
T PRK11316 417 PQRLIAEILPDLLVKGGDYKPEEI----AGSKEVWANGGEVKVLNFEDGCSTTNIIKKIR 472 (473)
T ss_pred HHHHHHHhCCCEEEECCCCCCCcc----ccHHHHHHcCCEEEEEcCCCCcCHHHHHHHHh
Confidence 789999999999999999865421 33567788999999999999999999999995
No 26
>cd02170 cytidylyltransferase cytidylyltransferase. The cytidylyltransferase family includes cholinephosphate cytidylyltransferase (CCT), glycerol-3-phosphate cytidylyltransferase, RafE and phosphoethanolamine cytidylyltransferase (ECT). All enzymes catalyze the transfer of a cytidylyl group from CTP to various substrates.
Probab=99.90 E-value=6.9e-23 Score=180.46 Aligned_cols=133 Identities=32% Similarity=0.613 Sum_probs=116.3
Q ss_pred CeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhhcccCeeEEcCCCCchH
Q 014503 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTK 335 (423)
Q Consensus 256 ~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~~~Vd~Vvi~~p~~~~~ 335 (423)
++++++.|+||++|.||+.+|++|++++|+++|+++.|+.++..|+ .|+++.+||++++++|++||.+++.+|++...
T Consensus 1 ~~~v~~~G~FD~~H~GH~~ll~~a~~~~~~l~v~v~~~~~~~~~~~--~~~~~~~eR~~~l~~~~~vd~v~~~~~~~~~~ 78 (136)
T cd02170 1 MKRVYAAGTFDIIHPGHIRFLEEAKKLGDYLIVGVARDETVAKIKR--RPILPEEQRAEVVEALKYVDEVILGHPWSYFK 78 (136)
T ss_pred CeEEEEcCccCCCCHHHHHHHHHHHHhCCEEEEEECCcHHHHhcCC--CCCCCHHHHHHHHHcCCCcCEEEECCCCCHhH
Confidence 4789999999999999999999999999999999999988876664 49999999999999999999999999887654
Q ss_pred HHHhhcCccEEEecCCcCCCCCCCCCCChHHHHHhCCeEEEeC--CCCCCCHHHHHHHHHh
Q 014503 336 DMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLE--SPKSITTTSVAQRIIA 394 (423)
Q Consensus 336 ~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~i~--~~~~~Stt~Ii~RI~~ 394 (423)
.+.+++||++|+|.||..+ ......+..++..|....++ ++..+|||.|+++|++
T Consensus 79 -~l~~~~~~~vv~G~d~~fg---~~~~~~~~~l~~~g~~~~~~~~~~~~vSSt~Ir~~i~~ 135 (136)
T cd02170 79 -PLEELKPDVIVLGDDQKNG---VDEEEVYEELKKRGKVIEVPRKKTEGISSSDIIKRILE 135 (136)
T ss_pred -HHHHHCCCEEEECCCCCCC---CcchhHHHHHHHCCeEEEECCCCCCCCcHHHHHHHHHh
Confidence 5677999999999998654 23445577788889988888 8899999999999953
No 27
>TIGR01518 g3p_cytidyltrns glycerol-3-phosphate cytidylyltransferase. Glycerol-3-phosphate cytidyltransferase acts in pathways of teichoic acid biosynthesis. Teichoic acids are substituted polymers, linked by phosphodiester bonds, of glycerol, ribitol, etc. An example is poly(glycerol phosphate), the major teichoic acid of the Bacillus subtilis cell wall. Most but not all species encoding proteins in this family are Gram-positive bacteria.
Probab=99.88 E-value=4.2e-22 Score=173.33 Aligned_cols=124 Identities=33% Similarity=0.497 Sum_probs=103.1
Q ss_pred EEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhhcccCeeEEcCCCCchHHHH
Q 014503 259 VYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMI 338 (423)
Q Consensus 259 v~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~~~Vd~Vvi~~p~~~~~~~i 338 (423)
|++.|+||++|.||.++|++|+++|++++|||++|+.....+ + .|+++++||++++++|+|||.|+++.|+....+.+
T Consensus 1 v~~~G~FDg~H~GH~~~l~~a~~~~~~~iv~v~~d~~~~~~~-~-~~i~~~eeR~~~l~~~~~Vd~vi~~~~~~~f~~~l 78 (125)
T TIGR01518 1 VLTYGTFDLLHWGHINLLERAKQLGDYLIVALSTDEFNLQKQ-K-KAYHSYEHRKLILETIRYVDLVIPEKSWEQKKQDI 78 (125)
T ss_pred CEEcceeCCCCHHHHHHHHHHHHcCCEEEEEEechHHHhhcC-C-CCCCCHHHHHHHHHcCCCccEEecCCCccchHHHH
Confidence 578899999999999999999999999999999999765433 2 69999999999999999999998888777666778
Q ss_pred hhcCccEEEecCCcCCCCCCCCCCChHHHHH-hCCeEEEeCCCCCCCHHHHHHHH
Q 014503 339 TTFNICLVVHGTVSETNTPLTGQSDPYEVAK-SMGIFQLLESPKSITTTSVAQRI 392 (423)
Q Consensus 339 ~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k-~~G~~~~i~~~~~~Stt~Ii~RI 392 (423)
+.++||++++|.||..+. + .+.+ .++....++++..+|||.|++.|
T Consensus 79 ~~~~~~~vv~G~D~~g~~------~--~l~~~~~~~v~~v~~~~~vSST~Ir~~~ 125 (125)
T TIGR01518 79 IDFNIDVFVMGDDWEGKF------D--FLKDECPLKVVYLPRTEGVSTTKIKKEI 125 (125)
T ss_pred HHcCCCEEEECCCccchH------H--HHhhccCcEEEEeCCCCCccHHHHHhhC
Confidence 999999999999984321 1 1111 23467788999999999998764
No 28
>cd02171 G3P_Cytidylyltransferase glycerol-3-phosphate cytidylyltransferase. Glycerol-3-phosphate cytidylyltransferase,(CDP-glycerol pyrophosphorylase). Glycerol-3-phosphate cytidyltransferase acts in pathways of teichoic acid biosynthesis. Teichoic acids are substituted polymers, linked by phosphodiester bonds, of glycerol, ribitol, etc. An example is poly(glycerol phosphate), the major teichoic acid of the Bacillus subtilis cell wall. Most, but not all, species encoding proteins in this family are Gram-positive bacteria. A closely related protein assigned a different function experimentally is a human ethanolamine-phosphate cytidylyltransferase.
Probab=99.88 E-value=1.5e-21 Score=170.34 Aligned_cols=127 Identities=30% Similarity=0.504 Sum_probs=108.4
Q ss_pred CeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhhcccCeeEEcCCCCchH
Q 014503 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTK 335 (423)
Q Consensus 256 ~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~~~Vd~Vvi~~p~~~~~ 335 (423)
+++|++.|+||++|.||..+|++|++++++|+|+|++|+.. ..+++ .|++|++||++++++|++||.|+.+.++....
T Consensus 1 ~~~v~~~G~FDgvH~GH~~ll~~a~~~~~~l~v~v~~d~~~-~~~~~-~~~~~~~~R~~~l~~~~~vd~v~~~~~~~~f~ 78 (129)
T cd02171 1 MKVVITYGTFDLLHIGHLNLLERAKALGDKLIVAVSTDEFN-AGKGK-KAVIPYEQRAEILESIRYVDLVIPETNWEQKI 78 (129)
T ss_pred CcEEEEeeeeccCCHHHHHHHHHHHHhCCEEEEEEeccHhH-HhcCC-CCCCCHHHHHHHHHcCCccCEEecCCCccChH
Confidence 36899999999999999999999999999999999999743 34443 69999999999999999999998766655556
Q ss_pred HHHhhcCccEEEecCCcCCCCCCCCCCChHHHHHhCCeEEEeCCCCCCCHHHHHHHHH
Q 014503 336 DMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRII 393 (423)
Q Consensus 336 ~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~i~~~~~~Stt~Ii~RI~ 393 (423)
+.++.++|+++++|.||..+ +...+..|.+..++.+..+|||.|.+.|.
T Consensus 79 ~~~~~l~~~~vv~G~d~~g~---------~~~l~~~~~v~~~~~~~~iSSt~Ir~~i~ 127 (129)
T cd02171 79 EDIKKYNVDVFVMGDDWEGK---------FDFLKEYCEVVYLPRTKGISSTQLKEMLK 127 (129)
T ss_pred HHHHHhCCCEEEECCCCcch---------HHHHHhCcEEEEeCCCCCcChHHHHHHHh
Confidence 66788999999999988432 35567778899999999999999999885
No 29
>cd02064 FAD_synthetase_N FAD synthetase, N-terminal domain of the bifunctional enzyme. FAD synthetase_N. N-terminal domain of the bifunctional riboflavin biosynthesis protein riboflavin kinase/FAD synthetase. These enzymes have both ATP:riboflavin 5'-phosphotransferase and ATP:FMN-adenylyltransferase activities. The N-terminal domain is believed to play a role in the adenylylation reaction of FAD synthetases. The C-terminal domain is thought to have kinase activity. FAD synthetase is present among all kingdoms of life. However, the bifunctional enzyme is not found in mammals, which use separate enzymes for FMN and FAD formation.
Probab=99.86 E-value=2.9e-21 Score=178.33 Aligned_cols=134 Identities=25% Similarity=0.358 Sum_probs=104.3
Q ss_pred EEEecccCcCcHHHHHHHHHHHHhcC---eeEEEEecch--hhh--ccCC-CCCCcHHHHHHHHhcCccccEEEecCCcc
Q 014503 68 VYMDGCFDLMHYGHANALRQAKALGD---ELVVGVVSDE--EII--ANKG-PPVLSMEERLALVSGLKWVDEVIANAPYA 139 (423)
Q Consensus 68 V~~~G~FD~lH~GH~~lL~qA~~~~d---~LiVgV~sd~--~i~--~~K~-~pi~t~eER~~~l~~~~~VD~vi~~~p~~ 139 (423)
|+++|+|||+|.||+.+|++|+++|+ ...+.++.++ ... +.+. .++++.++|+++++++ +||+++. .||+
T Consensus 2 vv~iG~FDgvH~GH~~ll~~a~~~a~~~~~~~vvv~f~~~p~~~~~~~~~~~~l~~~e~R~~~l~~l-~vd~v~~-~~f~ 79 (180)
T cd02064 2 VVAIGNFDGVHLGHQALIKTLKKIARERGLPSAVLTFDPHPREVFLPDKAPPRLTTLEEKLELLESL-GVDYLLV-LPFD 79 (180)
T ss_pred EEEEecCCccCHHHHHHHHHHHHHHHHcCCCeEEEEECCCHHHHhCCCCCCCcCCCHHHHHHHHHHc-CCCEEEE-eCCC
Confidence 78999999999999999999999974 2344444444 321 2222 6899999999999998 4999998 4553
Q ss_pred -----cc-HHHHHHHHhhcCccEEEEcCCCCCCCCCCcHHHHHHhCC-----cEEEeccC----CCCCHHHHHHHHHhc
Q 014503 140 -----IT-EQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVG-----RYKQIKRT----EGVSSTDIVGRILSS 203 (423)
Q Consensus 140 -----~~-~efl~~ll~~~~~d~VV~G~D~~~g~~g~~~~~~lk~~g-----~~~~v~r~----~~iSST~Ir~rI~~~ 203 (423)
++ ++|+++++.+.+++++|+|+||+||.++.++.+.+++.+ ++..++.. ..||||.||+.|.++
T Consensus 80 ~~~~~~s~~~Fi~~il~~~~~~~ivvG~Df~FG~~~~g~~~~L~~~~~~~g~~v~~v~~~~~~~~~iSST~IR~~i~~G 158 (180)
T cd02064 80 KEFASLSAEEFVEDLLVKLNAKHVVVGFDFRFGKGRSGDAELLKELGKKYGFEVTVVPPVTLDGERVSSTRIREALAEG 158 (180)
T ss_pred HHHHcCCHHHHHHHHHhhcCCeEEEEccCCCCCCCCCCCHHHHHHhhhhcCcEEEEeCcEecCCcEEcHHHHHHHHHhC
Confidence 12 478888776669999999999999999998888776543 35666653 469999999999865
No 30
>PRK07143 hypothetical protein; Provisional
Probab=99.86 E-value=7.5e-21 Score=186.43 Aligned_cols=137 Identities=16% Similarity=0.258 Sum_probs=112.2
Q ss_pred CCeEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhcc-CCCCCCcHHHHHHHHhcCccccEEEecCCcc---
Q 014503 64 KRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIAN-KGPPVLSMEERLALVSGLKWVDEVIANAPYA--- 139 (423)
Q Consensus 64 ~~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~-K~~pi~t~eER~~~l~~~~~VD~vi~~~p~~--- 139 (423)
+.+.|+++|+|||+|.||+.+|++|++.+..++|...+++..... +.+++++.+||.++++++ ++|.++. .||+
T Consensus 14 ~~~~vvaiG~FDGvH~GHq~Ll~~a~~~~~~~vV~tF~~P~~~~~~~~~~l~~~~er~~~l~~~-Gvd~~~~-~~F~~~~ 91 (279)
T PRK07143 14 FEKPTFVLGGFESFHLGHLELFKKAKESNDEIVIVIFKNPENLPKNTNKKFSDLNSRLQTLANL-GFKNIIL-LDFNEEL 91 (279)
T ss_pred CCCeEEEEccCCcCCHHHHHHHHHHHHCCCcEEEEEeCChHHhcccCcccCCCHHHHHHHHHHC-CCCEEEE-eCCCHHH
Confidence 345799999999999999999999999988777777666543222 225699999999999998 8899887 5553
Q ss_pred ---ccHHHHHHHHhhcCccEEEEcCCCCCCCCCCcHHHHHHhCC-cEEEecc----CCCCCHHHHHHHHHhc
Q 014503 140 ---ITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVG-RYKQIKR----TEGVSSTDIVGRILSS 203 (423)
Q Consensus 140 ---~~~efl~~ll~~~~~d~VV~G~D~~~g~~g~~~~~~lk~~g-~~~~v~r----~~~iSST~Ir~rI~~~ 203 (423)
-.++|++.++. ++++.||+|+||+||+++.++.+.|++.+ .+..++. ...||||.||+.|.++
T Consensus 92 a~ls~e~Fi~~ll~-l~~~~iVvG~Df~FG~~r~G~~~~L~~~~~~v~~v~~~~~~g~~ISST~IR~~l~~G 162 (279)
T PRK07143 92 QNLSGNDFIEKLTK-NQVSFFVVGKDFRFGKNASWNADDLKEYFPNVHIVEILKINQQKISTSLLKEFIEFG 162 (279)
T ss_pred hCCCHHHHHHHHHh-cCCCEEEECCCcccCCCCCCCHHHHHHhCCcEEEeCCEEcCCcEEcHHHHHHHHHcC
Confidence 12589988774 99999999999999999999999999988 5665554 2359999999999865
No 31
>PRK11316 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; Provisional
Probab=99.84 E-value=1.2e-20 Score=198.11 Aligned_cols=132 Identities=30% Similarity=0.457 Sum_probs=112.8
Q ss_pred CCeEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCC--CCCCcHHHHHHHHhcCccccEEEecCCcccc
Q 014503 64 KRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKG--PPVLSMEERLALVSGLKWVDEVIANAPYAIT 141 (423)
Q Consensus 64 ~~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~--~pi~t~eER~~~l~~~~~VD~vi~~~p~~~~ 141 (423)
..++|++.|+||++|.||+++|++|+++|+.++|||++|+.+...|+ .|+++.+||.+++++|++||.|++.. ....
T Consensus 339 ~~~iv~~~G~fD~~H~GH~~~l~~a~~~~~~l~v~v~~d~~~~~~k~~~~pi~~~~~R~~~~~~~~~vd~v~~~~-~~~~ 417 (473)
T PRK11316 339 GEKIVMTNGCFDILHAGHVSYLANARKLGDRLIVAVNSDASVKRLKGEGRPVNPLEQRMAVLAALEAVDWVVPFE-EDTP 417 (473)
T ss_pred CCeEEEEecccccCCHHHHHHHHHHHHhCCeeEEEEeCchhHHHhCCCCCCCCCHHHHHHHHHhcCcCCEEEeCC-CCCH
Confidence 35789999999999999999999999999999999999998866665 68999999999999999999998632 2233
Q ss_pred HHHHHHHHhhcCccEEEEcCCCCCCCCCCcHHHHHHhCCcEEEeccCCCCCHHHHHHHHH
Q 014503 142 EQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRIL 201 (423)
Q Consensus 142 ~efl~~ll~~~~~d~VV~G~D~~~g~~g~~~~~~lk~~g~~~~v~r~~~iSST~Ir~rI~ 201 (423)
.+|+ ++++||++|+|+||.+... .+.+...+..|+++.+++++++|||+|++||+
T Consensus 418 ~~~~----~~~~~d~vv~G~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~st~~i~~ri~ 472 (473)
T PRK11316 418 QRLI----AEILPDLLVKGGDYKPEEI-AGSKEVWANGGEVKVLNFEDGCSTTNIIKKIR 472 (473)
T ss_pred HHHH----HHhCCCEEEECCCCCCCcc-ccHHHHHHcCCEEEEEcCCCCcCHHHHHHHHh
Confidence 4554 5678999999999987542 34456667889999999999999999999996
No 32
>PRK05627 bifunctional riboflavin kinase/FMN adenylyltransferase; Reviewed
Probab=99.84 E-value=2.5e-20 Score=185.28 Aligned_cols=135 Identities=24% Similarity=0.338 Sum_probs=106.2
Q ss_pred EEEEecccCcCcHHHHHHHHHHHHhcCee---EEEEecchh--h--hccCC-CCCCcHHHHHHHHhcCccccEEEecCCc
Q 014503 67 RVYMDGCFDLMHYGHANALRQAKALGDEL---VVGVVSDEE--I--IANKG-PPVLSMEERLALVSGLKWVDEVIANAPY 138 (423)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~~~d~L---iVgV~sd~~--i--~~~K~-~pi~t~eER~~~l~~~~~VD~vi~~~p~ 138 (423)
+|+++|+|||+|.||+++|++|+++|+.+ .+.++.|+. . .+.+. +++++.+||.++++++ +||.++. .||
T Consensus 15 ~vv~iG~FDGvH~GHq~Ll~~a~~~a~~~~~~~~vitFd~~p~~~~~~~~~~~~l~t~eeR~~~l~~~-gVD~~~~-~~F 92 (305)
T PRK05627 15 CVLTIGNFDGVHRGHQALLARAREIARERGLPSVVMTFEPHPREVFAPDKAPARLTPLRDKAELLAEL-GVDYVLV-LPF 92 (305)
T ss_pred EEEEEeeCCcCCHHHHHHHHHHHHHHHhcCCCEEEEEecCCHHHHcCCCCCCcCCCCHHHHHHHHHHc-CCCEEEE-ecC
Confidence 79999999999999999999999998542 233444432 1 11222 6899999999999999 5999998 566
Q ss_pred c-----c-cHHHHHHHH-hhcCccEEEEcCCCCCCCCCCcHHHHHHhCC-----cEEEecc----CCCCCHHHHHHHHHh
Q 014503 139 A-----I-TEQFMNRLF-NEHKIDYIIHGDDPCLLPDGTDAYALAKKVG-----RYKQIKR----TEGVSSTDIVGRILS 202 (423)
Q Consensus 139 ~-----~-~~efl~~ll-~~~~~d~VV~G~D~~~g~~g~~~~~~lk~~g-----~~~~v~r----~~~iSST~Ir~rI~~ 202 (423)
+ + .++|+++++ ++++++++|+|+||+||.++.++++.+++.+ ++..++. ...||||.||+.|.+
T Consensus 93 ~~~~~~ls~e~Fi~~~l~~~l~~~~iVvG~Df~FG~~~~G~~~~L~~~~~~~g~~v~~v~~~~~~~~~ISST~IR~~I~~ 172 (305)
T PRK05627 93 DEEFAKLSAEEFIEDLLVKGLNAKHVVVGFDFRFGKKRAGDFELLKEAGKEFGFEVTIVPEVKEDGERVSSTAIRQALAE 172 (305)
T ss_pred CHHHhcCCHHHHHHHHHHhccCCCEEEECCCCCCCCCCCCCHHHHHHHHHHcCcEEEEeccEecCCCcCchHHHHHHHHc
Confidence 3 1 258998844 5799999999999999999999999988763 3455544 356999999999986
Q ss_pred c
Q 014503 203 S 203 (423)
Q Consensus 203 ~ 203 (423)
+
T Consensus 173 G 173 (305)
T PRK05627 173 G 173 (305)
T ss_pred C
Confidence 6
No 33
>PF06574 FAD_syn: FAD synthetase; InterPro: IPR015864 Riboflavin is converted into catalytically active cofactors (FAD and FMN) by the actions of riboflavin kinase (2.7.1.26 from EC), which converts it into FMN, and FAD synthetase (2.7.7.2 from EC), which adenylates FMN to FAD. Eukaryotes usually have two separate enzymes, while most prokaryotes have a single bifunctional protein that can carry out both catalyses, although exceptions occur in both cases. While eukaryotic monofunctional riboflavin kinase is orthologous to the bifunctional prokaryotic enzyme [], the monofunctional FAD synthetase differs from its prokaryotic counterpart, and is instead related to the PAPS-reductase family []. The bacterial FAD synthetase that is part of the bifunctional enzyme has remote similarity to nucleotidyl transferases and, hence, it may be involved in the adenylylation reaction of FAD synthetases []. This entry represents prokaryotic-type FAD synthetase, which occurs primarily as part of a bifunctional enzyme.; GO: 0003919 FMN adenylyltransferase activity, 0009231 riboflavin biosynthetic process; PDB: 2X0K_B 3OP1_B 1T6Z_A 2I1L_A 1T6Y_B 1T6X_B 1S4M_A 1MRZ_A.
Probab=99.81 E-value=8e-20 Score=165.28 Aligned_cols=130 Identities=26% Similarity=0.422 Sum_probs=91.8
Q ss_pred CCeEEEEecccCcCcHHHHHHHHHHHHhc---C--eeEEEEecchhhhcc--CC-CCCCcHHHHHHHHhcCccccEEEec
Q 014503 64 KRVRVYMDGCFDLMHYGHANALRQAKALG---D--ELVVGVVSDEEIIAN--KG-PPVLSMEERLALVSGLKWVDEVIAN 135 (423)
Q Consensus 64 ~~~~V~~~G~FD~lH~GH~~lL~qA~~~~---d--~LiVgV~sd~~i~~~--K~-~pi~t~eER~~~l~~~~~VD~vi~~ 135 (423)
..+.++++|+|||+|.||+.||++|++.+ + .+++.+.++|..... +. ..+++.+||.++++.+ +||+++.
T Consensus 4 ~~~~~v~iG~FDGvH~GHq~Li~~~~~~a~~~~~~~~v~tF~~~P~~~~~~~~~~~~l~s~~ek~~~l~~~-Gvd~~~~- 81 (157)
T PF06574_consen 4 NKKSVVAIGNFDGVHLGHQKLIKKAVEIAKEKGLKSVVLTFDPHPKEVLNPDKPPKLLTSLEEKLELLESL-GVDYVIV- 81 (157)
T ss_dssp -S-EEEEES--TT--HHHHHHHHHHHHHHHHCT-EEEEEEESS-CHHHHSCTCCGGBSS-HHHHHHHHHHT-TESEEEE-
T ss_pred CCCcEEEEeCCCCccHHHHHHHHHHhhhhhhcccceEEEEcccCHHHHhcCCCcccCCCCHHHHHHHHHHc-CCCEEEE-
Confidence 45689999999999999999999999997 2 245555555532222 22 5699999999999997 8999887
Q ss_pred CCcccc------HHHHHHHHh-hcCccEEEEcCCCCCCCCCCcHHHHHHhCCc-----EEEeccC----CCCCHHH
Q 014503 136 APYAIT------EQFMNRLFN-EHKIDYIIHGDDPCLLPDGTDAYALAKKVGR-----YKQIKRT----EGVSSTD 195 (423)
Q Consensus 136 ~p~~~~------~efl~~ll~-~~~~d~VV~G~D~~~g~~g~~~~~~lk~~g~-----~~~v~r~----~~iSST~ 195 (423)
.||+-+ ++|++.++. ++++..||+|+||+||+++.++.+.|++.++ +..++.. ..||||+
T Consensus 82 ~~F~~~~~~ls~~~Fi~~iL~~~l~~~~ivvG~DfrFG~~~~G~~~~L~~~~~~~g~~v~~v~~~~~~~~~ISStr 157 (157)
T PF06574_consen 82 IPFTEEFANLSPEDFIEKILKEKLNVKHIVVGEDFRFGKNRSGDVELLKELGKEYGFEVEVVPPVKIDGEKISSTR 157 (157)
T ss_dssp E-CCCHHCCS-HHHHHHHHCCCHCTEEEEEEETT-EESGGGEEEHHHHHHCTTTT-SEEEEE---EETTEE-SHHH
T ss_pred ecchHHHHcCCHHHHHHHHHHhcCCccEEEEccCccCCCCCCCCHHHHHHhcccCceEEEEECCEEcCCcEeCCCC
Confidence 455322 599999776 8999999999999999999999999999885 3444432 2499985
No 34
>TIGR00083 ribF riboflavin kinase/FMN adenylyltransferase. multifunctional enzyme: riboflavin kinase (EC 2.7.1.26) (flavokinase) / FMN adenylyltransferase (EC 2.7.7.2) (FAD pyrophosphorylase) (FAD synthetase).
Probab=99.80 E-value=3.2e-19 Score=175.89 Aligned_cols=134 Identities=18% Similarity=0.259 Sum_probs=105.0
Q ss_pred EEEecccCcCcHHHHHHHHHHHHhc-----CeeEEEEecchhhhc--cCCCCCCcHHHHHHHHhcCccccEEEecCCccc
Q 014503 68 VYMDGCFDLMHYGHANALRQAKALG-----DELVVGVVSDEEIIA--NKGPPVLSMEERLALVSGLKWVDEVIANAPYAI 140 (423)
Q Consensus 68 V~~~G~FD~lH~GH~~lL~qA~~~~-----d~LiVgV~sd~~i~~--~K~~pi~t~eER~~~l~~~~~VD~vi~~~p~~~ 140 (423)
++++|+|||+|.||+.+|++|++.+ ..+++.+.++|.... .+.+++++.+||.++++.+ +||.++. .||+-
T Consensus 1 ~vaiG~FDGvH~GHq~Li~~~~~~a~~~~~~~~V~tF~phP~~~~~~~~~~~l~~~~~k~~~l~~~-Gvd~~~~-~~F~~ 78 (288)
T TIGR00083 1 SLAIGYFDGLHLGHQALLQELKQIAEEKGLPPAVLLFEPHPSEQFNWLTAPALTPLEDKARQLQIK-GVEQLLV-VVFDE 78 (288)
T ss_pred CEEEEeCCccCHHHHHHHHHHHHHHHHhCCCEEEEEeCCChHHHhCccCCCCCCCHHHHHHHHHHc-CCCEEEE-eCCCH
Confidence 5899999999999999999999875 245555555554222 2223499999999999998 8999998 56632
Q ss_pred -----c-HHHHHHHH-hhcCccEEEEcCCCCCCCCCCcHHHHHHhCCcE-----EEecc---CCCCCHHHHHHHHHhc
Q 014503 141 -----T-EQFMNRLF-NEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRY-----KQIKR---TEGVSSTDIVGRILSS 203 (423)
Q Consensus 141 -----~-~efl~~ll-~~~~~d~VV~G~D~~~g~~g~~~~~~lk~~g~~-----~~v~r---~~~iSST~Ir~rI~~~ 203 (423)
+ ++|+++++ ++++++.||+|+||+||.++.++.+.|++.++. ..++. ...||||.||+.|.++
T Consensus 79 ~~a~ls~e~Fi~~~l~~~l~~~~ivvG~Df~FG~~~~G~~~~L~~~~~~~g~~v~~~~~~~~~~~ISST~IR~~l~~G 156 (288)
T TIGR00083 79 EFANLSALQFIDQLIVKHLHVKFLVVGDDFRFGHDRQGDFLLLQLFGNTTIFCVIVKQLFCQDIRISSSAIRQALKNG 156 (288)
T ss_pred HHHcCCHHHHHHHHHHhccCCcEEEECCCccCCCCCCCCHHHHHHhccccCcEEEEeccccCCCeECHHHHHHHHHcC
Confidence 2 48998876 469999999999999999999999999987752 22222 2359999999999876
No 35
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.79 E-value=5.5e-19 Score=176.52 Aligned_cols=132 Identities=36% Similarity=0.509 Sum_probs=115.9
Q ss_pred CeEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCC--CCCCcHHHHHHHHhcCccccEEEecCCccccH
Q 014503 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKG--PPVLSMEERLALVSGLKWVDEVIANAPYAITE 142 (423)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~--~pi~t~eER~~~l~~~~~VD~vi~~~p~~~~~ 142 (423)
.+.|++.||||.+|.||..+|.+|+++||.|+||++||.++.+.|| +||.+++.|+..+.+++.||.|+. |++
T Consensus 332 ~~vvfTNGcFDIlH~GHvsyL~~Ar~lgd~Livg~NsDaSvkrLKG~~RPin~~~~Ra~vLa~L~~VD~vV~-----F~e 406 (467)
T COG2870 332 KKVVFTNGCFDILHAGHVTYLAQARALGDRLIVGVNSDASVKRLKGESRPINSEEDRAAVLAALESVDLVVI-----FDE 406 (467)
T ss_pred CeEEEecchhhhccccHHHHHHHHHhhCCeEEEEeccchhhhhhcCCCCCCCcHHHHHHHHhhcccceEEEE-----ecC
Confidence 3489999999999999999999999999999999999999988888 899999999999999999999998 466
Q ss_pred HHHHHHHhhcCccEEEEcCCCCCCCCCCcHHHHHHhCCcEEEeccCCCCCHHHHHHHHHh
Q 014503 143 QFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILS 202 (423)
Q Consensus 143 efl~~ll~~~~~d~VV~G~D~~~g~~g~~~~~~lk~~g~~~~v~r~~~iSST~Ir~rI~~ 202 (423)
|+-.+|++.+.||.+|.|-||+...- .+........|++..++..++.|||.|+++|..
T Consensus 407 dTP~~LI~~~~PdilVKGgDy~~~~i-~g~~~v~~~GG~v~~i~f~~g~STt~ii~ki~~ 465 (467)
T COG2870 407 DTPEELIEAVKPDILVKGGDYKIEKI-VGADIVEAYGGEVLLIPFEEGKSTTKIIEKIRA 465 (467)
T ss_pred CCHHHHHHHhCcceEEccCCCChhhc-cchhhhhhcCCeEEEEecccCCcHHHHHHHHhc
Confidence 66677888899999999999975321 233345567889999999999999999999975
No 36
>COG0196 RibF FAD synthase [Coenzyme metabolism]
Probab=99.75 E-value=6.7e-18 Score=166.81 Aligned_cols=137 Identities=23% Similarity=0.336 Sum_probs=106.5
Q ss_pred CeEEEEecccCcCcHHHHHHHHHHHHhcC-----eeEEEEecchhhh--ccCC-CCCCcHHHHHHHHhcCccccEEEecC
Q 014503 65 RVRVYMDGCFDLMHYGHANALRQAKALGD-----ELVVGVVSDEEII--ANKG-PPVLSMEERLALVSGLKWVDEVIANA 136 (423)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~~d-----~LiVgV~sd~~i~--~~K~-~pi~t~eER~~~l~~~~~VD~vi~~~ 136 (423)
...++++|+|||+|.||+.+|++|++.+. .+++...+.|... +.+. ..+++.++|.+.++.+ +||.++. .
T Consensus 15 ~~~~l~IG~FDGvHlGHq~ll~~a~~~a~~~~~~~~VitF~p~P~~~~~~~~~~~~Lt~~~~k~~~l~~~-gvd~~~v-~ 92 (304)
T COG0196 15 RGCVLTIGNFDGVHLGHQKLLAQALEAAEKRGLPVVVITFEPHPRELLKPDKPPTRLTPLREKIRLLAGY-GVDALVV-L 92 (304)
T ss_pred CCcEEEEEcCCccchhHHHHHHHHHHHHHHhCCceEEEEecCCCHHHcCCCCCccccCCHHHHHHHHHhc-CCcEEEE-E
Confidence 45899999999999999999999998762 2344444444321 1111 3499999999999998 8999987 4
Q ss_pred Ccccc------HHHHHHHHhhcCccEEEEcCCCCCCCCCCcHHHHHHhCCc----EEEeccC--C--CCCHHHHHHHHHh
Q 014503 137 PYAIT------EQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGR----YKQIKRT--E--GVSSTDIVGRILS 202 (423)
Q Consensus 137 p~~~~------~efl~~ll~~~~~d~VV~G~D~~~g~~g~~~~~~lk~~g~----~~~v~r~--~--~iSST~Ir~rI~~ 202 (423)
+|+.. ++|++.+++.++++.||+|+||+||+++.++.++++..|+ +..++.. + .||||.||+.+..
T Consensus 93 ~F~~~fa~ls~~~Fv~~lv~~l~~k~ivvG~DF~FGk~~~g~~~~L~~~~~~gf~v~~v~~~~~~~~~iSSt~IR~~L~~ 172 (304)
T COG0196 93 DFDLEFANLSAEEFVELLVEKLNVKHIVVGFDFRFGKGRQGNAELLRELGQKGFEVTIVPKINEEGIRISSTAIRQALRE 172 (304)
T ss_pred eCCHhHhhCCHHHHHHHHHhccCCcEEEEecccccCCCCCCCHHHHHHhccCCceEEEeccEecCCcEEchHHHHHHHhc
Confidence 45421 4899977789999999999999999999999999998885 4444442 3 3999999999875
Q ss_pred c
Q 014503 203 S 203 (423)
Q Consensus 203 ~ 203 (423)
+
T Consensus 173 g 173 (304)
T COG0196 173 G 173 (304)
T ss_pred C
Confidence 4
No 37
>cd02039 cytidylyltransferase_like Cytidylyltransferase-like domain. Cytidylyltransferase-like domain. Many of these proteins are known to use CTP or ATP and release pyrophosphate. Protein families that contain at least one copy of this domain include citrate lyase ligase, pantoate-beta-alanine ligase, glycerol-3-phosphate cytidyltransferase, ADP-heptose synthase, phosphocholine cytidylyltransferase, lipopolysaccharide core biosynthesis protein KdtB, the bifunctional protein NadR, and a number whose function is unknown.
Probab=99.72 E-value=2.7e-17 Score=143.98 Aligned_cols=131 Identities=19% Similarity=0.244 Sum_probs=97.7
Q ss_pred EEEEecccCcCcHHHHHHHHHHHHhc-CeeEEEEecchhhhccCCCCCCcHHHHHHHHhcCcc-ccEEEe-cCCc---cc
Q 014503 67 RVYMDGCFDLMHYGHANALRQAKALG-DELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKW-VDEVIA-NAPY---AI 140 (423)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~~~-d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~~-VD~vi~-~~p~---~~ 140 (423)
.++++|+|||+|.||+.++++|++.+ +.++|++.+++.... +..++++.++|+++++.+.. ++.++. ..+. ..
T Consensus 1 ~~~~~G~Fdp~H~GH~~ll~~a~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~R~~~l~~~~~~~~~v~~~~~~~~~~~~ 79 (143)
T cd02039 1 VGIIIGRFEPFHLGHLKLIKEALEEALDEVIIIIVSNPPKKK-RNKDPFSLHERVEMLKEILKDRLKVVPVDFPEVKILL 79 (143)
T ss_pred CeEEeeccCCcCHHHHHHHHHHHHHcCCceEEEEcCCChhhc-ccccCCCHHHHHHHHHHhccCCcEEEEEecChhhccC
Confidence 37899999999999999999999999 999999988875432 13589999999999999853 666664 1111 11
Q ss_pred cHHHHHHHHhhcCccEEEEcCCCCCCCCCCcHHHHHHh---CCcEEEeccC---CCCCHHHHHHH
Q 014503 141 TEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKK---VGRYKQIKRT---EGVSSTDIVGR 199 (423)
Q Consensus 141 ~~efl~~ll~~~~~d~VV~G~D~~~g~~g~~~~~~lk~---~g~~~~v~r~---~~iSST~Ir~r 199 (423)
+.+|+..++..++++++++|.|+.++....+. +.++. ..+++.+++. ..||||.||++
T Consensus 80 ~~~~~~~~~~~~~~~~~v~G~d~~~~~~~~~~-~~~~~~~~~~~vv~~~~~~~~~~iSSt~IR~~ 143 (143)
T cd02039 80 AVVFILKILLKVGPDKVVVGEDFAFGKNASYN-KDLKELFLDIEIVEVPRVRDGKKISSTLIREL 143 (143)
T ss_pred HHHHHHHHHHHcCCcEEEECCccccCCchhhh-HHHHHhCCceEEEeeEecCCCcEEehHHhhcC
Confidence 22466666677999999999999998765543 23332 2356667776 45999999964
No 38
>PRK00777 phosphopantetheine adenylyltransferase; Provisional
Probab=99.71 E-value=1.9e-17 Score=149.20 Aligned_cols=132 Identities=26% Similarity=0.339 Sum_probs=93.9
Q ss_pred eEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhcCccccEEEecCCcccc---H
Q 014503 66 VRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPYAIT---E 142 (423)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~~VD~vi~~~p~~~~---~ 142 (423)
++|+++|+||++|.||.++|++|++++++|+|||++|+.+.++|+.|+++.++|++|++. +++.+.+...+.+. .
T Consensus 2 ~~v~~gGtFDplH~GH~~ll~~A~~~~d~livgi~~d~~~~~~K~~~i~~~e~R~~~v~~--~~~~~~~~~~~~i~~i~d 79 (153)
T PRK00777 2 MKVAVGGTFDPLHDGHRALLRKAFELGKRVTIGLTSDEFAKSYKKHKVRPYEVRLKNLKK--FLKAVEYDREYEIVKIDD 79 (153)
T ss_pred cEEEEecccCCCCHHHHHHHHHHHHcCCEEEEEEcCCccccccCCCCCCCHHHHHHHHHH--HHHhcCCCCcEEEEeccc
Confidence 589999999999999999999999999999999999987766666799999999999995 56655443333221 1
Q ss_pred HHHHHHHhhcCccEEEEcCCCCCCCCCCcHHHHHHhCC----cEEEecc-----CCCCCHHHHHHHHHhc
Q 014503 143 QFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVG----RYKQIKR-----TEGVSSTDIVGRILSS 203 (423)
Q Consensus 143 efl~~ll~~~~~d~VV~G~D~~~g~~g~~~~~~lk~~g----~~~~v~r-----~~~iSST~Ir~rI~~~ 203 (423)
.|.... ..++|++|+|+|-..+ +...-+..++.| ++..++. +..+|||.||+++.+.
T Consensus 80 ~~gp~~--~~~~d~ivvs~et~~~--~~~in~~r~~~gl~~l~i~~v~~~~~~~~~~~SSt~Ir~~~~~~ 145 (153)
T PRK00777 80 PYGPAL--EDDFDAIVVSPETYPG--ALKINEIRRERGLKPLEIVVIDFVLAEDGKPISSTRIRRGEIDE 145 (153)
T ss_pred cCCCcc--ccCCCEEEEChhhhhh--HHHHHHHHHHCCCCceEEEEEeeeecCCCCeeeHHHHHHhhhcc
Confidence 121111 2369999999993222 122223334444 2455554 4559999999988754
No 39
>PRK00777 phosphopantetheine adenylyltransferase; Provisional
Probab=99.68 E-value=1.6e-16 Score=143.17 Aligned_cols=130 Identities=22% Similarity=0.334 Sum_probs=93.0
Q ss_pred eEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhh----cccCeeEE---cC
Q 014503 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLAC----RYVDEVII---GA 329 (423)
Q Consensus 257 ~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~----~~Vd~Vvi---~~ 329 (423)
+.|++.|+||++|.||+.+|++|+.+||+|+|||++|+.+..+|+ .|++++++|+++++.+ ...+.+.+ .+
T Consensus 2 ~~v~~gGtFDplH~GH~~ll~~A~~~~d~livgi~~d~~~~~~K~--~~i~~~e~R~~~v~~~~~~~~~~~~~~i~~i~d 79 (153)
T PRK00777 2 MKVAVGGTFDPLHDGHRALLRKAFELGKRVTIGLTSDEFAKSYKK--HKVRPYEVRLKNLKKFLKAVEYDREYEIVKIDD 79 (153)
T ss_pred cEEEEecccCCCCHHHHHHHHHHHHcCCEEEEEEcCCccccccCC--CCCCCHHHHHHHHHHHHHhcCCCCcEEEEeccc
Confidence 469999999999999999999999999999999999998877775 6999999999999854 12333332 23
Q ss_pred CCCchHHHHhhcCccEEEecCCcCCCCCCCCCCChHHHHHhCC----eEEEeCC-----CCCCCHHHHHHHHHhchH
Q 014503 330 PWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMG----IFQLLES-----PKSITTTSVAQRIIANHE 397 (423)
Q Consensus 330 p~~~~~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G----~~~~i~~-----~~~~Stt~Ii~RI~~~~~ 397 (423)
++.++ + ..++|++|.|+|...+ +.......+..| .+..++. +..+|||.|++++.+.+.
T Consensus 80 ~~gp~---~-~~~~d~ivvs~et~~~-----~~~in~~r~~~gl~~l~i~~v~~~~~~~~~~~SSt~Ir~~~~~~~~ 147 (153)
T PRK00777 80 PYGPA---L-EDDFDAIVVSPETYPG-----ALKINEIRRERGLKPLEIVVIDFVLAEDGKPISSTRIRRGEIDEHG 147 (153)
T ss_pred cCCCc---c-ccCCCEEEEChhhhhh-----HHHHHHHHHHCCCCceEEEEEeeeecCCCCeeeHHHHHHhhhcccc
Confidence 33322 2 2369999999873222 111122333444 2344554 567999999999987654
No 40
>PRK00168 coaD phosphopantetheine adenylyltransferase; Provisional
Probab=99.63 E-value=6.4e-15 Score=133.54 Aligned_cols=131 Identities=18% Similarity=0.256 Sum_probs=97.1
Q ss_pred CeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHh-hcccCeeEEcCCCCch
Q 014503 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA-CRYVDEVIIGAPWEVT 334 (423)
Q Consensus 256 ~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~-~~~Vd~Vvi~~p~~~~ 334 (423)
+++++++|+|||+|.||+.++++|++.+|+|+|+++++. .| +|+++.++|+.+++. ++.+|.+.+.+.++.+
T Consensus 1 ~~igi~gGsFdP~H~GHl~~~~~a~~~~d~v~v~~~~~~----~k---~~~~~~~~R~~ml~~a~~~~~~v~v~~~e~~t 73 (159)
T PRK00168 1 MKIAIYPGSFDPITNGHLDIIERASRLFDEVIVAVAINP----SK---KPLFSLEERVELIREATAHLPNVEVVSFDGLL 73 (159)
T ss_pred CcEEEEeeecCCCCHHHHHHHHHHHHHCCEEEEEECCCC----CC---CCCCCHHHHHHHHHHHHcCCCCEEEecCCccH
Confidence 368999999999999999999999999999999998763 23 489999999999987 9999999887766678
Q ss_pred HHHHhhcCccEEEecCCcCCCCCCCCCCChH-HHHHhC----CeEEEeCCC--CCCCHHHHHHHHHhch
Q 014503 335 KDMITTFNICLVVHGTVSETNTPLTGQSDPY-EVAKSM----GIFQLLESP--KSITTTSVAQRIIANH 396 (423)
Q Consensus 335 ~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~-~~~k~~----G~~~~i~~~--~~~Stt~Ii~RI~~~~ 396 (423)
.++++.++++++++|-+... ++ +..... ...+.+ +.+..++.+ ..+|||.|.+||..+.
T Consensus 74 ~~~~~~~~~~~~~~gl~~w~-d~--e~~~~~~~~~r~~~~~~~~i~~~~~~~~~~ISST~IR~~i~~g~ 139 (159)
T PRK00168 74 VDFAREVGATVIVRGLRAVS-DF--EYEFQMAGMNRKLAPEIETVFLMPSPEYSFISSSLVKEVARLGG 139 (159)
T ss_pred HHHHHHcCCCEEEecCcchh-hH--HHHHHHHHhCCCCCCCCcEEEEeCCCCcceecHHHHHHHHHcCC
Confidence 89999999999999943111 11 000000 011111 223333333 3699999999997654
No 41
>PRK01170 phosphopantetheine adenylyltransferase/unknown domain fusion protein; Provisional
Probab=99.58 E-value=9.9e-15 Score=145.31 Aligned_cols=128 Identities=18% Similarity=0.305 Sum_probs=94.7
Q ss_pred EEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhh--cccCeeEEc---CCCC
Q 014503 258 VVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLAC--RYVDEVIIG---APWE 332 (423)
Q Consensus 258 iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~--~~Vd~Vvi~---~p~~ 332 (423)
+|++.|+||+||.||+.+|++|+++||+|||||++|+.++++|. +| .|+++|+.+|+++ ++++.+.+. +|+.
T Consensus 2 ~V~vgGTFD~lH~GH~~lL~~A~~~gd~LiVgvt~D~~~~~~k~--~~-~~~e~R~~~v~~fl~~~~~~~~i~~i~D~~G 78 (322)
T PRK01170 2 ITVVGGTFSKLHKGHKALLKKAIETGDEVVIGLTSDEYVRKNKV--YP-IPYEDRKRKLENFIKKFTNKFRIRPIDDRYG 78 (322)
T ss_pred EEEEccccccCChHHHHHHHHHHHcCCEEEEEEccHHHHHhcCC--CC-CCHHHHHHHHHHHHHhcCCcEEEEecCCCCC
Confidence 69999999999999999999999999999999999999987663 68 9999999999995 777765553 4444
Q ss_pred chHHHHhhcCccEEEecCCcCCCCCCCCCCChHHHHHhCCe----EEEeCC-----CCCCCHHHHHHHHHhch
Q 014503 333 VTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGI----FQLLES-----PKSITTTSVAQRIIANH 396 (423)
Q Consensus 333 ~~~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~----~~~i~~-----~~~~Stt~Ii~RI~~~~ 396 (423)
+ .+..-+||++|-+++...+ +....+..+..|. ++.++. ...+|||.|++.-++.+
T Consensus 79 p---t~~~~~~d~IVVS~ET~~~-----~~~IN~~R~e~Gl~pleIv~I~~v~~~d~~~iSSTrIr~~eid~~ 143 (322)
T PRK01170 79 N---TLYEEDYEIIVVSPETYQR-----ALKINEIRIKNGLPPLKIVRVPYVLAEDLFPISSTRIINGEIDGN 143 (322)
T ss_pred C---CcccCCCCEEEEecccccc-----HHHHHHHHHHCCCCceEEEEEEeEEcCCCCcccHHHHhhhhcccc
Confidence 3 3456789999999875332 2222233445552 333322 23479999999765543
No 42
>PRK00168 coaD phosphopantetheine adenylyltransferase; Provisional
Probab=99.57 E-value=3.6e-14 Score=128.61 Aligned_cols=126 Identities=22% Similarity=0.261 Sum_probs=87.7
Q ss_pred eEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhc-CccccEEEecCCccccHHH
Q 014503 66 VRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKWVDEVIANAPYAITEQF 144 (423)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~-~~~VD~vi~~~p~~~~~ef 144 (423)
++++++|+||++|.||+.++++|++.+|+|+|++..++ .| .++++.++|++|++. ++.++.+.+..--+++.++
T Consensus 2 ~igi~gGsFdP~H~GHl~~~~~a~~~~d~v~v~~~~~~----~k-~~~~~~~~R~~ml~~a~~~~~~v~v~~~e~~t~~~ 76 (159)
T PRK00168 2 KIAIYPGSFDPITNGHLDIIERASRLFDEVIVAVAINP----SK-KPLFSLEERVELIREATAHLPNVEVVSFDGLLVDF 76 (159)
T ss_pred cEEEEeeecCCCCHHHHHHHHHHHHHCCEEEEEECCCC----CC-CCCCCHHHHHHHHHHHHcCCCCEEEecCCccHHHH
Confidence 57999999999999999999999999999999987754 24 579999999999997 7788877663211234455
Q ss_pred HHHHHhhcCccEEEEcCC-CCCCCCCCcHHHHH--H-hC----CcEEEeccC--CCCCHHHHHHHHHhc
Q 014503 145 MNRLFNEHKIDYIIHGDD-PCLLPDGTDAYALA--K-KV----GRYKQIKRT--EGVSSTDIVGRILSS 203 (423)
Q Consensus 145 l~~ll~~~~~d~VV~G~D-~~~g~~g~~~~~~l--k-~~----g~~~~v~r~--~~iSST~Ir~rI~~~ 203 (423)
+ +.+++++++.|-| |. +++...... . .. ..+..+... ..||||.||+++..+
T Consensus 77 ~----~~~~~~~~~~gl~~w~---d~e~~~~~~~~~r~~~~~~~~i~~~~~~~~~~ISST~IR~~i~~g 138 (159)
T PRK00168 77 A----REVGATVIVRGLRAVS---DFEYEFQMAGMNRKLAPEIETVFLMPSPEYSFISSSLVKEVARLG 138 (159)
T ss_pred H----HHcCCCEEEecCcchh---hHHHHHHHHHhCCCCCCCCcEEEEeCCCCcceecHHHHHHHHHcC
Confidence 4 5678999999944 32 111111111 1 11 112222222 259999999999854
No 43
>smart00764 Citrate_ly_lig Citrate lyase ligase C-terminal domain. Proteins of this family contain the C-terminal domain of citrate lyase ligase EC:6.2.1.22.
Probab=99.57 E-value=2.8e-14 Score=132.07 Aligned_cols=126 Identities=21% Similarity=0.215 Sum_probs=93.4
Q ss_pred ecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhcC-ccccE---------EEecCCc--
Q 014503 71 DGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGL-KWVDE---------VIANAPY-- 138 (423)
Q Consensus 71 ~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~-~~VD~---------vi~~~p~-- 138 (423)
.-.|||+|.||..++++|.+.++.+.|.+.+. + .+.++.++|++|++.. +.... .+....|
T Consensus 5 ~~~~DPiH~GHl~i~~~a~~~~d~~~V~v~p~------~-~~~~s~e~R~~Mi~~a~~~~~~v~v~~~~~~~v~~~~~~~ 77 (182)
T smart00764 5 VMNANPFTLGHRYLVEQAAAECDWVHLFVVSE------D-ASLFSFDERFALVKKGTKDLDNVTVHSGSDYIISRATFPS 77 (182)
T ss_pred EECCCCCCHHHHHHHHHHHHHCCceEEEEEeC------C-CCCCCHHHHHHHHHHHhccCCCEEEEecCCceeccccChh
Confidence 34799999999999999999998888777654 2 3577999999999852 22221 1111111
Q ss_pred cc--------------c-HHHHHHHHhhcCccEEEEcCCCCCCCCCCcHHHHHHhCC----cEEEecc----CCCCCHHH
Q 014503 139 AI--------------T-EQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVG----RYKQIKR----TEGVSSTD 195 (423)
Q Consensus 139 ~~--------------~-~efl~~ll~~~~~d~VV~G~D~~~g~~g~~~~~~lk~~g----~~~~v~r----~~~iSST~ 195 (423)
-+ + ++|++.+.+++++..||+|+||+||.++.|+.+.|+..+ ++..+++ ...+|||.
T Consensus 78 ~~~~~~~~~~~~~a~lsa~~Fi~~L~~~l~~~~ivvG~df~FG~~~~G~~~~L~~~~~~g~~v~~I~r~~~~g~~iSST~ 157 (182)
T smart00764 78 YFLKEQDVVIKSQTTLDLRIFRKYIAPALGITHRYVGEEPFSPVTAIYNQTMKQTLLSPAIEVVEIERKKANGQPISAST 157 (182)
T ss_pred hhcCchhHHHHHHhcCCHHHHHHHHHHHcCceEEEEcCCCCCCCCCccCHHHHHHHhhCCCEEEEEecccCCCcEECHHH
Confidence 01 0 378875557799999999999999999999999888763 3556666 23499999
Q ss_pred HHHHHHhc
Q 014503 196 IVGRILSS 203 (423)
Q Consensus 196 Ir~rI~~~ 203 (423)
||+.|.++
T Consensus 158 IR~~L~~G 165 (182)
T smart00764 158 VRKLLKEG 165 (182)
T ss_pred HHHHHHcC
Confidence 99999754
No 44
>TIGR01527 arch_NMN_Atrans nicotinamide-nucleotide adenylyltransferase. In some archaeal species, a lower-scoring paralog, uncharacterized with respect to activity, is also present. These score between trusted and noise cutoffs.
Probab=99.56 E-value=2.2e-14 Score=130.69 Aligned_cols=124 Identities=24% Similarity=0.339 Sum_probs=85.2
Q ss_pred EEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHh-cCcccc-EEEecCCccccHHH
Q 014503 67 RVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVS-GLKWVD-EVIANAPYAITEQF 144 (423)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~-~~~~VD-~vi~~~p~~~~~ef 144 (423)
|++++|+||++|.||++++++|.+.+|+|+|++.+++. .+|..+.++.+||++|++ +++.++ ..+...|.. +.+.
T Consensus 1 rgl~~G~FdP~H~GHl~ii~~a~~~~D~lii~i~s~~~--~~k~~~p~~~~eR~~mi~~al~~~~~~~~~~vP~~-d~~~ 77 (165)
T TIGR01527 1 RGFYIGRFQPFHLGHLEVIKKIAEEVDELIIGIGSAQE--SHTLENPFTAGERILMITQSLKEVGDLTYYIIPIE-DIER 77 (165)
T ss_pred CeEEEeccCCCCHHHHHHHHHHHHHCCEEEEEEcCCCC--CCCCCCCCCHHHHHHHHHHHHhcCCCceEEEEecC-CccH
Confidence 47899999999999999999999999999999988774 334445567799999994 555553 311112211 1111
Q ss_pred HHHHHhhc------CccEEEEcCCCCCCCCCCcHHHHHHhCC-cEEEec---cCCCCCHHHHHHHHHhc
Q 014503 145 MNRLFNEH------KIDYIIHGDDPCLLPDGTDAYALAKKVG-RYKQIK---RTEGVSSTDIVGRILSS 203 (423)
Q Consensus 145 l~~ll~~~------~~d~VV~G~D~~~g~~g~~~~~~lk~~g-~~~~v~---r~~~iSST~Ir~rI~~~ 203 (423)
.+....+ ++|+|+.|+.+ ....+++.| ++..++ |+ ++|||+||++|+++
T Consensus 78 -~~~w~~~v~~~~p~~D~vf~~~~~--------~~~~f~e~g~~v~~~p~~~r~-~~S~T~IR~~i~~~ 136 (165)
T TIGR01527 78 -NSIWVSYVESMTPPFDVVYSNNPL--------VRRLFKEAGYEVKRPPMFNRK-EYSGTEIRRRMLNG 136 (165)
T ss_pred -HHHHHHHHHHhCCCCCEEEECCHH--------HHHHHHHcCCEEEECCCcCCC-cccHHHHHHHHHcC
Confidence 1112233 77999999543 244566666 455555 55 89999999999864
No 45
>PF01467 CTP_transf_2: Cytidylyltransferase; InterPro: IPR004820 This family includes []: Cholinephosphate cytidyltransferase (P49585 from SWISSPROT). Glycerol-3-phosphate cytidyltransferase (P27623 from SWISSPROT). CTP:cholinephosphate cytidylyltransferase (CCT) is a key regulatory enzyme in phosphatidylcholine biosynthesis that catalyzes the formation of CDP-choline. A comparison of the catalytic domains of CCTs from a wide variety of organisms reveals a large number of completely conserved residues. There may be a role for the conserved HXGH sequence in catalysis. The membrane-binding domain in rat CCT has been defined, and it has been suggested that lipids may play a role in inactivating the enzyme. A phosphorylation domain has been described [].; GO: 0016779 nucleotidyltransferase activity, 0009058 biosynthetic process; PDB: 1O6B_A 1H1T_A 1B6T_A 1GN8_A 1QJC_A 3ELB_A 3NBK_A 3NBA_A 1TFU_A 3LCJ_A ....
Probab=99.53 E-value=9.9e-15 Score=128.81 Aligned_cols=126 Identities=29% Similarity=0.433 Sum_probs=90.7
Q ss_pred EEcCeeccCCHHHHHHHHHHHhcCCE-EEEEEecChhhhhccCCCCCCCCHHHHHHHHHhhcccCe--------------
Q 014503 260 YIDGAFDLFHAGHVEILKKARQLGDF-LLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDE-------------- 324 (423)
Q Consensus 260 ~~~G~FDl~H~GHi~~L~~A~~~gd~-LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~~~Vd~-------------- 324 (423)
+++|+|||+|.||+.+|++|++.+|. ++++|.+|....+ .. +++++.++|+.+++.+..++.
T Consensus 1 l~~GsFdP~H~GH~~~l~~a~~~~~~~~vi~v~~~~~~~k--~~-~~~~~~~~R~~ml~~~~~~~~~i~v~~~e~~~~~~ 77 (157)
T PF01467_consen 1 LFGGSFDPPHNGHLNLLREARELFDEDLVIVVPSDNSPHK--DK-KPIFSFEERLEMLRAAFKDDPNIEVDDWELEQDKK 77 (157)
T ss_dssp EEEE--TT--HHHHHHHHHHHHHSSESEEEEEEEEHHCHS--TT-SSSSTHHHHHHHHHHHHTTCTTEEEEEEHHHSSHH
T ss_pred CeeeEcCcccHHHHHHHHHHHHhccccccccccccccccc--cc-cccCcHHHHHHHHHHHHhhcCCccccchhHHhHhh
Confidence 57899999999999999999999997 7888998876543 22 489999999999999887777
Q ss_pred --------eEEcCC-------CCchHHHHhhcCccEEEecCCcCCCCCCCCCCChHHHHHhCC-eEEEeCCCCCCCHHHH
Q 014503 325 --------VIIGAP-------WEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMG-IFQLLESPKSITTTSV 388 (423)
Q Consensus 325 --------Vvi~~p-------~~~~~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G-~~~~i~~~~~~Stt~I 388 (423)
++++++ |....++++.+++.++.++.++..... ..+.+......+ .+........+|||.|
T Consensus 78 ~~~~~~~~~v~g~D~~~~~~~~~~~~~~~~~~~~~v~~r~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~iSST~I 154 (157)
T PF01467_consen 78 KYPDVKIYFVIGADNLRNFPKWRDWQEILKEVNIIVVSRGGDDPIETI---SDDEILEKYPLGIIFILDPPRNEISSTEI 154 (157)
T ss_dssp HSTSSCEEEEEECTHHEEEEESTTHHHHHHHHHEEEEEHHHTTTHEEE---EHCHHHHHTTCEEEEEEEGGGTTSSHHHH
T ss_pred hccccccceeccCCceeeecCCCcHHHHHHhCCEEEEEcCCCCccchh---hhccccccccceeEEEecCCCCccCHHHH
Confidence 788877 666778999999999999865432211 112222222333 3344455567999999
Q ss_pred HHH
Q 014503 389 AQR 391 (423)
Q Consensus 389 i~R 391 (423)
.+|
T Consensus 155 R~~ 157 (157)
T PF01467_consen 155 RER 157 (157)
T ss_dssp HHH
T ss_pred hcC
Confidence 987
No 46
>COG0669 CoaD Phosphopantetheine adenylyltransferase [Coenzyme metabolism]
Probab=99.53 E-value=3.5e-14 Score=126.01 Aligned_cols=89 Identities=21% Similarity=0.356 Sum_probs=78.0
Q ss_pred CeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHh-hcccCeeEEcCCCCch
Q 014503 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA-CRYVDEVIIGAPWEVT 334 (423)
Q Consensus 256 ~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~-~~~Vd~Vvi~~p~~~~ 334 (423)
+++++++|+|||+|.||++++++|.+++|.|||+|..+. .| +|+++++||..+++. .+..++|-+....++.
T Consensus 2 ~~iavypGSFDPiTnGHlDii~RA~~~Fd~viVaV~~np----~K---~plFsleER~~l~~~~~~~l~nV~V~~f~~Ll 74 (159)
T COG0669 2 MKIAVYPGSFDPITNGHLDIIKRASALFDEVIVAVAINP----SK---KPLFSLEERVELIREATKHLPNVEVVGFSGLL 74 (159)
T ss_pred CeeEEeCCCCCCCccchHHHHHHHHHhccEEEEEEEeCC----Cc---CCCcCHHHHHHHHHHHhcCCCceEEEecccHH
Confidence 588999999999999999999999999999999999664 34 699999999977755 4677777776666789
Q ss_pred HHHHhhcCccEEEecCC
Q 014503 335 KDMITTFNICLVVHGTV 351 (423)
Q Consensus 335 ~~~i~~~~~d~vv~G~d 351 (423)
.++.++.++.++|||=.
T Consensus 75 vd~ak~~~a~~ivRGLR 91 (159)
T COG0669 75 VDYAKKLGATVLVRGLR 91 (159)
T ss_pred HHHHHHcCCCEEEEecc
Confidence 99999999999999954
No 47
>cd02169 Citrate_lyase_ligase Citrate lyase ligase. Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction.
Probab=99.52 E-value=1.7e-13 Score=135.94 Aligned_cols=130 Identities=18% Similarity=0.194 Sum_probs=96.1
Q ss_pred CeEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhcC-cc---------ccEEEe
Q 014503 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGL-KW---------VDEVIA 134 (423)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~-~~---------VD~vi~ 134 (423)
.+.+.+.|+|||+|.||..++++|.+.++.++|.+.+. + ++.++.++|++|++.. +. -|.++.
T Consensus 114 ~~~~~~~~~FDPiH~GHl~ii~~a~~~~d~~~V~i~~~------~-~~~~~~e~R~~ml~~ai~~~~~v~v~~~~~l~v~ 186 (297)
T cd02169 114 KKIAAIVMNANPFTLGHRYLVEKAAAENDWVHLFVVSE------D-KSLFSFADRFKLVKKGTKHLKNVTVHSGGDYIIS 186 (297)
T ss_pred CceEEEEecCCCCchHHHHHHHHHHhhCCeEEEEEEcC------C-CCCCCHHHHHHHHHHHhCCCCCEEEEecCCeeec
Confidence 57889999999999999999999999999888877652 2 5688999999999842 11 122222
Q ss_pred cCCcc----------------cc-HHHHHHHH-hhcCccEEEEcCCCCCCCCCCcHHHHHHhCCc-----EEEecc----
Q 014503 135 NAPYA----------------IT-EQFMNRLF-NEHKIDYIIHGDDPCLLPDGTDAYALAKKVGR-----YKQIKR---- 187 (423)
Q Consensus 135 ~~p~~----------------~~-~efl~~ll-~~~~~d~VV~G~D~~~g~~g~~~~~~lk~~g~-----~~~v~r---- 187 (423)
...|. ++ ++|++ ++ +++++..||+|+||+||.++.++..+++. |+ +..++.
T Consensus 187 ~~~~~~~~~~~~~~~~~~~a~lsa~~Fi~-iL~~~l~~~~ivvG~Df~FG~~r~G~~~l~~~-~~~~gf~v~~v~~~~~~ 264 (297)
T cd02169 187 SATFPSYFIKEQDVVIKAQTALDARIFRK-YIAPALNITKRYVGEEPFSRVTAIYNQTMQEE-LLSPAIEVIEIERKKYD 264 (297)
T ss_pred cccChhhhcCChhHHHHHHhcCCHHHHHH-HHHHHcCCcEEEEcCCCCCCCcchhHHHHHHh-cccCCCEEEEecccccC
Confidence 11110 00 38887 66 56999999999999999999998555555 43 344443
Q ss_pred CCCCCHHHHHHHHHhc
Q 014503 188 TEGVSSTDIVGRILSS 203 (423)
Q Consensus 188 ~~~iSST~Ir~rI~~~ 203 (423)
...||||.||+.|.++
T Consensus 265 g~~ISST~IR~~l~~G 280 (297)
T cd02169 265 GQPISASTVRQLLKEG 280 (297)
T ss_pred CcEEcHHHHHHHHHcC
Confidence 2349999999999876
No 48
>cd02163 PPAT Phosphopantetheine adenylyltransferase. Phosphopantetheine adenylyltransferase (PPAT). PPAT is an essential enzyme in bacteria, responsible for catalyzing the rate-limiting step in coenzyme A (CoA) biosynthesis. The dinucleotide-binding fold of PPAT is homologous to class I aminoacyl-tRNA synthetases. CoA has been shown to inhibit PPAT and competes with ATP, PhP, and dPCoA. PPAT is a homohexamer in E. coli.
Probab=99.51 E-value=1.1e-13 Score=124.71 Aligned_cols=129 Identities=18% Similarity=0.246 Sum_probs=95.2
Q ss_pred EEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHh-hcccCeeEEcCCCCchHH
Q 014503 258 VVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA-CRYVDEVIIGAPWEVTKD 336 (423)
Q Consensus 258 iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~-~~~Vd~Vvi~~p~~~~~~ 336 (423)
+++++|+|||+|.||+.++++|++.+|.|+|+++++. .| .|.++.++|+.+++. ++.++.+.+.+-.+.+.+
T Consensus 1 i~i~gGsFdP~H~GHl~l~~~a~~~~d~v~v~~~~~~----~k---~~~~~~~~R~~ml~~a~~~~~~~~v~~~es~t~~ 73 (153)
T cd02163 1 IAVYPGSFDPITNGHLDIIERASKLFDEVIVAVAVNP----SK---KPLFSLEERVELIREATKHLPNVEVDGFDGLLVD 73 (153)
T ss_pred CEEEEeccCCCCHHHHHHHHHHHHHCCEEEEEEcCCC----CC---CCCCCHHHHHHHHHHHHcCCCCEEecCCcchHHH
Confidence 4789999999999999999999999999999998763 24 478999999999876 799999988775567889
Q ss_pred HHhhcCccEEEecCCcCCCCCCCCCCChHHHHHhC-----CeEEEeCCCC--CCCHHHHHHHHHhch
Q 014503 337 MITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSM-----GIFQLLESPK--SITTTSVAQRIIANH 396 (423)
Q Consensus 337 ~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~-----G~~~~i~~~~--~~Stt~Ii~RI~~~~ 396 (423)
+++.++.+++++|.|...+ + +........... ..+..++.+. ++|||.|.+|+..+.
T Consensus 74 ~l~~l~~~~~i~G~d~~~~-~--e~~~~~~~~~r~~~~~~~~i~~~~~~~~~~iSST~IR~~~~~g~ 137 (153)
T cd02163 74 FARKHGANVIVRGLRAVSD-F--EYEFQMAGMNRKLAPEIETVFLMASPEYSFISSSLVKEIARFGG 137 (153)
T ss_pred HHHHcCCCEEEECCcchhh-H--HHHHHHHHhCCCCCCCCcEEEEeCCCccceecHHHHHHHHHcCC
Confidence 9999999999999553221 1 110011111111 2233334332 599999999998654
No 49
>cd02039 cytidylyltransferase_like Cytidylyltransferase-like domain. Cytidylyltransferase-like domain. Many of these proteins are known to use CTP or ATP and release pyrophosphate. Protein families that contain at least one copy of this domain include citrate lyase ligase, pantoate-beta-alanine ligase, glycerol-3-phosphate cytidyltransferase, ADP-heptose synthase, phosphocholine cytidylyltransferase, lipopolysaccharide core biosynthesis protein KdtB, the bifunctional protein NadR, and a number whose function is unknown.
Probab=99.49 E-value=1.3e-13 Score=120.66 Aligned_cols=129 Identities=20% Similarity=0.142 Sum_probs=91.7
Q ss_pred EEEEcCeeccCCHHHHHHHHHHHhcC-CEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhhcc-cCeeEEcCCCCc--
Q 014503 258 VVYIDGAFDLFHAGHVEILKKARQLG-DFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRY-VDEVIIGAPWEV-- 333 (423)
Q Consensus 258 iv~~~G~FDl~H~GHi~~L~~A~~~g-d~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~~~-Vd~Vvi~~p~~~-- 333 (423)
++++.|+||++|.||+.+|++|++++ |.++|++.++..... + +.++++.++|+.+++++.. +|.|++.+....
T Consensus 1 ~~~~~G~Fdp~H~GH~~ll~~a~~~~~~~~~v~~~~~~~~~~-~--~~~~~~~~~R~~~l~~~~~~~~~v~~~~~~~~~~ 77 (143)
T cd02039 1 VGIIIGRFEPFHLGHLKLIKEALEEALDEVIIIIVSNPPKKK-R--NKDPFSLHERVEMLKEILKDRLKVVPVDFPEVKI 77 (143)
T ss_pred CeEEeeccCCcCHHHHHHHHHHHHHcCCceEEEEcCCChhhc-c--cccCCCHHHHHHHHHHhccCCcEEEEEecChhhc
Confidence 57899999999999999999999999 999999999875432 1 2589999999999999986 787777442211
Q ss_pred ------hHHHHhhcCccEEEecCCcCCCCCCCCCCChHHHHHhCC-eEEEeCCC---CCCCHHHHHHH
Q 014503 334 ------TKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMG-IFQLLESP---KSITTTSVAQR 391 (423)
Q Consensus 334 ------~~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G-~~~~i~~~---~~~Stt~Ii~R 391 (423)
....+..+++++++.|.|+...-. .+.. ........+ .++.+++. ..+|||.|.+|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~v~G~d~~~~~~-~~~~-~~~~~~~~~~~vv~~~~~~~~~~iSSt~IR~~ 143 (143)
T cd02039 78 LLAVVFILKILLKVGPDKVVVGEDFAFGKN-ASYN-KDLKELFLDIEIVEVPRVRDGKKISSTLIREL 143 (143)
T ss_pred cCHHHHHHHHHHHcCCcEEEECCccccCCc-hhhh-HHHHHhCCceEEEeeEecCCCcEEehHHhhcC
Confidence 113566789999999999865421 1221 111111223 34445554 57899999764
No 50
>PLN02388 phosphopantetheine adenylyltransferase
Probab=99.49 E-value=2.9e-14 Score=130.88 Aligned_cols=134 Identities=19% Similarity=0.230 Sum_probs=89.8
Q ss_pred CCCeEEEEecccCcCcHHHHHHHHHHHHhc-CeeEEEEecchhhhccC-CCCCCcHHHHHHHHhcCc----c---ccEEE
Q 014503 63 KKRVRVYMDGCFDLMHYGHANALRQAKALG-DELVVGVVSDEEIIANK-GPPVLSMEERLALVSGLK----W---VDEVI 133 (423)
Q Consensus 63 ~~~~~V~~~G~FD~lH~GH~~lL~qA~~~~-d~LiVgV~sd~~i~~~K-~~pi~t~eER~~~l~~~~----~---VD~vi 133 (423)
.....|+++|+||++|.||+.||++|.+++ +.++||+++++.....+ ...+.+.++|.+.++..- . ++.+-
T Consensus 17 ~~~~~Vv~gGtFDgLH~GHq~LL~~A~~~a~~~vvIgft~~p~l~~k~~~~~I~~~e~R~~~l~~fl~~~~p~~~~~i~~ 96 (177)
T PLN02388 17 NSYGAVVLGGTFDRLHDGHRLFLKAAAELARDRIVIGVCDGPMLSKKQFAELIQPIEERMHNVEEYIKSIKPELVVQAEP 96 (177)
T ss_pred CcCCeEEEEecCCccCHHHHHHHHHHHHhhhcCEEEecCCChhhcccCCCcccCCHHHHHHHHHHHHHHcCCCceEEEEE
Confidence 345689999999999999999999999998 47999999999753322 257999999999998621 1 12222
Q ss_pred ecCCccccHHHHHHHHhhcCccEEEEcCCCCCCCCCCcHHHHHHhCC--c--EEEec---c---CCCCCHHHHHHHHHhc
Q 014503 134 ANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVG--R--YKQIK---R---TEGVSSTDIVGRILSS 203 (423)
Q Consensus 134 ~~~p~~~~~efl~~ll~~~~~d~VV~G~D~~~g~~g~~~~~~lk~~g--~--~~~v~---r---~~~iSST~Ir~rI~~~ 203 (423)
+..||..+.. .-+.|++|++..-..|...-+.... +.| . +..++ . ...||||+||+++.+.
T Consensus 97 i~D~~Gpt~~-------~~~~d~LVVS~ET~~g~~~IN~~R~--e~Gl~pL~i~~v~~v~~~~~~~kiSST~iR~~~~~~ 167 (177)
T PLN02388 97 IIDPYGPSIV-------DENLEAIVVSKETLPGGLSVNKKRA--ERGLSQLKIEVVDIVPEESTGNKLSSTTLRRLEAEK 167 (177)
T ss_pred ecCCCCCccc-------CCCCCEEEEcHhHhhhHHHHHHHHH--HCCCCCeEEEEEEeEecCCCCCccCHHHHHHHHHHH
Confidence 3455543321 2367899999886555333222221 233 1 22221 1 2359999999999876
Q ss_pred cc
Q 014503 204 ME 205 (423)
Q Consensus 204 ~~ 205 (423)
.+
T Consensus 168 ~~ 169 (177)
T PLN02388 168 AV 169 (177)
T ss_pred HH
Confidence 54
No 51
>cd02166 NMNAT_Archaea Nicotinamide/nicotinate mononucleotide adenylyltransferase, archaeal. This family of archaeal proteins exhibits nicotinamide-nucleotide adenylyltransferase (NMNAT) activity utilizing the salvage pathway to synthesize NAD. In some cases, the enzyme was tested and found also to have the activity of nicotinate-nucleotide adenylyltransferase an enzyme of NAD de novo biosynthesis, although with a higher Km. In some archaeal species, a number of proteins which are uncharacterized with respect to activity, are also present.
Probab=99.48 E-value=4.1e-13 Score=122.23 Aligned_cols=126 Identities=21% Similarity=0.261 Sum_probs=85.2
Q ss_pred EEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHh-cCcccc------EEEecCCcc
Q 014503 67 RVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVS-GLKWVD------EVIANAPYA 139 (423)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~-~~~~VD------~vi~~~p~~ 139 (423)
+++++|+||++|.||.+++++|.+.+|+|+|++.++... .+....++.+||++|++ .+...| .++....+.
T Consensus 1 ~~v~~G~FdP~H~GHl~~i~~a~~~~d~l~v~v~s~~~~--~~~~~~~~~~~R~~mi~~~~~~~~~~~~~v~v~~~~d~~ 78 (163)
T cd02166 1 RALFIGRFQPFHLGHLKVIKWILEEVDELIIGIGSAQES--HTLENPFTAGERVLMIRRALEEEGIDLSRYYIIPVPDIE 78 (163)
T ss_pred CeEEeeccCCCCHHHHHHHHHHHHHCCEEEEEecCCCCC--CCCCCCCCHHHHHHHHHHHHHhcCCCcCeEEEEecCCCC
Confidence 368999999999999999999999999999999776532 23345578899999999 445554 333321122
Q ss_pred ccHHHHHHHHhhc-CccEEEEcCCCCCCCCCCcHHHHHHhCC-cEEEeccC--CCCCHHHHHHHHHh
Q 014503 140 ITEQFMNRLFNEH-KIDYIIHGDDPCLLPDGTDAYALAKKVG-RYKQIKRT--EGVSSTDIVGRILS 202 (423)
Q Consensus 140 ~~~efl~~ll~~~-~~d~VV~G~D~~~g~~g~~~~~~lk~~g-~~~~v~r~--~~iSST~Ir~rI~~ 202 (423)
....+...+.... ++|+++.|++|. ...+++.| .+..++++ +++|+|.||++|.+
T Consensus 79 ~~~~w~~~v~~~vp~~div~~g~~~~--------~~~f~~~g~~v~~~p~~~~~~~s~t~iR~~~~~ 137 (163)
T cd02166 79 RNSLWVSYVESLTPPFDVVYSGNPLV--------ARLFKEAGYEVRRPPMFNREEYSGTEIRRLMLG 137 (163)
T ss_pred chHHHHHHHHHHCCCCCEEEECchHH--------HHhhhhcCCeEecCCcccCCCCCHHHHHHHHHc
Confidence 2333433322222 478999997642 12333444 45567763 47999999999874
No 52
>cd02163 PPAT Phosphopantetheine adenylyltransferase. Phosphopantetheine adenylyltransferase (PPAT). PPAT is an essential enzyme in bacteria, responsible for catalyzing the rate-limiting step in coenzyme A (CoA) biosynthesis. The dinucleotide-binding fold of PPAT is homologous to class I aminoacyl-tRNA synthetases. CoA has been shown to inhibit PPAT and competes with ATP, PhP, and dPCoA. PPAT is a homohexamer in E. coli.
Probab=99.48 E-value=2.1e-13 Score=122.89 Aligned_cols=123 Identities=22% Similarity=0.313 Sum_probs=84.9
Q ss_pred EEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhc-CccccEEEecCCc-cccHHHH
Q 014503 68 VYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKWVDEVIANAPY-AITEQFM 145 (423)
Q Consensus 68 V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~-~~~VD~vi~~~p~-~~~~efl 145 (423)
++++|+||++|.||..++++|.+.+|++++++.+++ .| .++++.++|++|++. ++.++.+.+ .++ +++.+++
T Consensus 2 ~i~gGsFdP~H~GHl~l~~~a~~~~d~v~v~~~~~~----~k-~~~~~~~~R~~ml~~a~~~~~~~~v-~~~es~t~~~l 75 (153)
T cd02163 2 AVYPGSFDPITNGHLDIIERASKLFDEVIVAVAVNP----SK-KPLFSLEERVELIREATKHLPNVEV-DGFDGLLVDFA 75 (153)
T ss_pred EEEEeccCCCCHHHHHHHHHHHHHCCEEEEEEcCCC----CC-CCCCCHHHHHHHHHHHHcCCCCEEe-cCCcchHHHHH
Confidence 689999999999999999999999999999998754 24 478999999999996 667777665 223 2444554
Q ss_pred HHHHhhcCccEEEEcCC-CCCCCCCCcHHHHH--HhCC----cEEEeccCC---CCCHHHHHHHHHhc
Q 014503 146 NRLFNEHKIDYIIHGDD-PCLLPDGTDAYALA--KKVG----RYKQIKRTE---GVSSTDIVGRILSS 203 (423)
Q Consensus 146 ~~ll~~~~~d~VV~G~D-~~~g~~g~~~~~~l--k~~g----~~~~v~r~~---~iSST~Ir~rI~~~ 203 (423)
+.++.+++++|-| |... +.-.... ...+ ....+..+. .+|||.||+++..+
T Consensus 76 ----~~l~~~~~i~G~d~~~~~---e~~~~~~~~~r~~~~~~~~i~~~~~~~~~~iSST~IR~~~~~g 136 (153)
T cd02163 76 ----RKHGANVIVRGLRAVSDF---EYEFQMAGMNRKLAPEIETVFLMASPEYSFISSSLVKEIARFG 136 (153)
T ss_pred ----HHcCCCEEEECCcchhhH---HHHHHHHHhCCCCCCCCcEEEEeCCCccceecHHHHHHHHHcC
Confidence 5678999999954 2111 1111111 1111 112222222 49999999999865
No 53
>TIGR01527 arch_NMN_Atrans nicotinamide-nucleotide adenylyltransferase. In some archaeal species, a lower-scoring paralog, uncharacterized with respect to activity, is also present. These score between trusted and noise cutoffs.
Probab=99.48 E-value=4e-13 Score=122.44 Aligned_cols=120 Identities=22% Similarity=0.275 Sum_probs=86.7
Q ss_pred EEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHH-HhhcccC-e---eEEcCCCCc
Q 014503 259 VYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSV-LACRYVD-E---VIIGAPWEV 333 (423)
Q Consensus 259 v~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v-~~~~~Vd-~---Vvi~~p~~~ 333 (423)
+++.|+|||||.||+.++++|++.||+|+|+|.+++. .+|.. .|+ +.+||..++ ++++.++ . +++.... .
T Consensus 2 gl~~G~FdP~H~GHl~ii~~a~~~~D~lii~i~s~~~--~~k~~-~p~-~~~eR~~mi~~al~~~~~~~~~~vP~~d~-~ 76 (165)
T TIGR01527 2 GFYIGRFQPFHLGHLEVIKKIAEEVDELIIGIGSAQE--SHTLE-NPF-TAGERILMITQSLKEVGDLTYYIIPIEDI-E 76 (165)
T ss_pred eEEEeccCCCCHHHHHHHHHHHHHCCEEEEEEcCCCC--CCCCC-CCC-CHHHHHHHHHHHHhcCCCceEEEEecCCc-c
Confidence 6889999999999999999999999999999998875 33432 455 779999999 6778774 3 2222212 2
Q ss_pred hHHHHhhc------CccEEEecCCcCCCCCCCCCCChHHHHHhCCeE-EEeC---CCCCCCHHHHHHHHHhc
Q 014503 334 TKDMITTF------NICLVVHGTVSETNTPLTGQSDPYEVAKSMGIF-QLLE---SPKSITTTSVAQRIIAN 395 (423)
Q Consensus 334 ~~~~i~~~------~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~-~~i~---~~~~~Stt~Ii~RI~~~ 395 (423)
..+.+.++ ++|+|+.|... .....+..|.. ..++ ++ .+|+|.|.++|.++
T Consensus 77 ~~~~w~~~v~~~~p~~D~vf~~~~~-----------~~~~f~e~g~~v~~~p~~~r~-~~S~T~IR~~i~~~ 136 (165)
T TIGR01527 77 RNSIWVSYVESMTPPFDVVYSNNPL-----------VRRLFKEAGYEVKRPPMFNRK-EYSGTEIRRRMLNG 136 (165)
T ss_pred HHHHHHHHHHHhCCCCCEEEECCHH-----------HHHHHHHcCCEEEECCCcCCC-cccHHHHHHHHHcC
Confidence 34456666 88999998421 12345566643 4444 54 89999999999875
No 54
>TIGR00125 cyt_tran_rel cytidyltransferase-related domain. Protein families that contain at least one copy of this domain include citrate lyase ligase, pantoate-beta-alanine ligase, glycerol-3-phosphate cytidyltransferase, ADP-heptose synthase, phosphocholine cytidylyltransferase, lipopolysaccharide core biosynthesis protein KdtB, the bifunctional protein NadR, and a number whose function is unknown. Many of these proteins are known to use CTP or ATP and release pyrophosphate.
Probab=99.48 E-value=9e-14 Score=106.88 Aligned_cols=65 Identities=43% Similarity=0.719 Sum_probs=59.6
Q ss_pred EEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhhcccCe
Q 014503 258 VVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDE 324 (423)
Q Consensus 258 iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~~~Vd~ 324 (423)
++++.|+||++|.||+.+|++|++++|.++|+|.+|+..+..|. .|+++.++|..++++|.+++.
T Consensus 1 i~~~~G~Fdp~H~GH~~~l~~a~~~~~~~vv~i~~~~~~~~~~~--~~~~~~~~R~~~~~~~~~~~~ 65 (66)
T TIGR00125 1 RVIFVGTFDPFHLGHLDLLERAKELFDELIVGVGSDQFVNPLKG--EPVFSLEERLEMLKALKYVDE 65 (66)
T ss_pred CEEEcCccCCCCHHHHHHHHHHHHhCCEEEEEECchHhccccCC--CCCCCHHHHHHHHHHhccccC
Confidence 58999999999999999999999999999999999988877664 399999999999999998874
No 55
>COG1057 NadD Nicotinic acid mononucleotide adenylyltransferase [Coenzyme metabolism]
Probab=99.47 E-value=3.5e-13 Score=126.04 Aligned_cols=136 Identities=26% Similarity=0.257 Sum_probs=101.3
Q ss_pred CCeEEEEecccCcCcHHHHHHHHHHHHhc--CeeEEEEecchhhhccCC-CCCCcHHHHHHHHhc-CccccE------EE
Q 014503 64 KRVRVYMDGCFDLMHYGHANALRQAKALG--DELVVGVVSDEEIIANKG-PPVLSMEERLALVSG-LKWVDE------VI 133 (423)
Q Consensus 64 ~~~~V~~~G~FD~lH~GH~~lL~qA~~~~--d~LiVgV~sd~~i~~~K~-~pi~t~eER~~~l~~-~~~VD~------vi 133 (423)
.+++++++|+|||+|.||+.++++|.+.. |.|++.++..+ +.|. +...+.++|++|++- ++.... .+
T Consensus 2 ~~~i~lfGGsFdP~H~GHl~ia~~~~~~l~ld~vi~~ps~~~---p~k~~~~~a~~~~R~~Ml~la~~~~~~~~v~~~e~ 78 (197)
T COG1057 2 MKKIALFGGSFDPPHYGHLLIAEEALDQLGLDKVIFLPSPVP---PHKKKKELASAEHRLAMLELAIEDNPRFEVSDREI 78 (197)
T ss_pred CceEEEeccCCCCCCHHHHHHHHHHHHhcCCCeEEEecCCCC---CCCCCccCCCHHHHHHHHHHHHhcCCCcceeHHHH
Confidence 46789999999999999999999999975 67777666654 3454 679999999999983 222222 23
Q ss_pred ecCCccccHHHHHHHHhhcCcc---EEEEcCC-CCCCCCCCcHHHHHHhCCcEEEeccCC--------------------
Q 014503 134 ANAPYAITEQFMNRLFNEHKID---YIIHGDD-PCLLPDGTDAYALAKKVGRYKQIKRTE-------------------- 189 (423)
Q Consensus 134 ~~~p~~~~~efl~~ll~~~~~d---~VV~G~D-~~~g~~g~~~~~~lk~~g~~~~v~r~~-------------------- 189 (423)
...+.++|.++++.+.+++++| +.++|.| ....+.|.+ ++.+-+.+++..++|..
T Consensus 79 ~r~g~sYT~dTl~~~~~~~~p~~~~~fIiGaD~l~~l~~W~~-~~ell~~~~~vv~~Rp~~~~~~~~~~~~~~~~~~~~~ 157 (197)
T COG1057 79 KRGGPSYTIDTLEHLRQEYGPDVELYFIIGADNLASLPKWYD-WDELLKLVTFVVAPRPGYGELELSLLSSGGAIILLDL 157 (197)
T ss_pred HcCCCcchHHHHHHHHHHhCCCCcEEEEEehHHhhhhhhhhh-HHHHHHhCCEEEEecCCchhhhhhhhcCCceEEEccC
Confidence 3445677788998887788898 5888888 455566765 55666666777666632
Q ss_pred ---CCCHHHHHHHHHhc
Q 014503 190 ---GVSSTDIVGRILSS 203 (423)
Q Consensus 190 ---~iSST~Ir~rI~~~ 203 (423)
.||||.||+++..+
T Consensus 158 ~~~~ISSt~IR~~~~~~ 174 (197)
T COG1057 158 PRLDISSTEIRERIRRG 174 (197)
T ss_pred ccccCchHHHHHHHhCC
Confidence 49999999999865
No 56
>cd02064 FAD_synthetase_N FAD synthetase, N-terminal domain of the bifunctional enzyme. FAD synthetase_N. N-terminal domain of the bifunctional riboflavin biosynthesis protein riboflavin kinase/FAD synthetase. These enzymes have both ATP:riboflavin 5'-phosphotransferase and ATP:FMN-adenylyltransferase activities. The N-terminal domain is believed to play a role in the adenylylation reaction of FAD synthetases. The C-terminal domain is thought to have kinase activity. FAD synthetase is present among all kingdoms of life. However, the bifunctional enzyme is not found in mammals, which use separate enzymes for FMN and FAD formation.
Probab=99.45 E-value=6.1e-13 Score=122.90 Aligned_cols=136 Identities=16% Similarity=0.176 Sum_probs=94.8
Q ss_pred EEEcCeeccCCHHHHHHHHHHHhcCC---EEEEEEecChhhhh---ccCCCCCCCCHHHHHHHHHhhcccCeeEEcCCC-
Q 014503 259 VYIDGAFDLFHAGHVEILKKARQLGD---FLLVGIYTDQIVSE---HRGSYHPIMHLHERSLSVLACRYVDEVIIGAPW- 331 (423)
Q Consensus 259 v~~~G~FDl~H~GHi~~L~~A~~~gd---~LiVgv~~D~~v~~---~Kg~~~pi~~~~ER~~~v~~~~~Vd~Vvi~~p~- 331 (423)
|++-|+||++|.||..+|++|+++++ ...|.++-|..... .+....|+++.++|+.+++++. ||.|++.+..
T Consensus 2 vv~iG~FDgvH~GH~~ll~~a~~~a~~~~~~~vvv~f~~~p~~~~~~~~~~~~l~~~e~R~~~l~~l~-vd~v~~~~f~~ 80 (180)
T cd02064 2 VVAIGNFDGVHLGHQALIKTLKKIARERGLPSAVLTFDPHPREVFLPDKAPPRLTTLEEKLELLESLG-VDYLLVLPFDK 80 (180)
T ss_pred EEEEecCCccCHHHHHHHHHHHHHHHHcCCCeEEEEECCCHHHHhCCCCCCCcCCCHHHHHHHHHHcC-CCEEEEeCCCH
Confidence 78999999999999999999999975 35666666654432 1223468999999999999998 9999985421
Q ss_pred ----CchHHHHhh----cCccEEEecCCcCCCCCCCCCC-C-hHHHHHhCC-eEEEeCC----CCCCCHHHHHHHHHhch
Q 014503 332 ----EVTKDMITT----FNICLVVHGTVSETNTPLTGQS-D-PYEVAKSMG-IFQLLES----PKSITTTSVAQRIIANH 396 (423)
Q Consensus 332 ----~~~~~~i~~----~~~d~vv~G~d~~~~~~~~~~~-d-~~~~~k~~G-~~~~i~~----~~~~Stt~Ii~RI~~~~ 396 (423)
..+.++++. .+|+.+|.|.||...-- ..++ + .....+..| ....++. ...+|||.|.+.|.+..
T Consensus 81 ~~~~~s~~~Fi~~il~~~~~~~ivvG~Df~FG~~-~~g~~~~L~~~~~~~g~~v~~v~~~~~~~~~iSST~IR~~i~~G~ 159 (180)
T cd02064 81 EFASLSAEEFVEDLLVKLNAKHVVVGFDFRFGKG-RSGDAELLKELGKKYGFEVTVVPPVTLDGERVSSTRIREALAEGD 159 (180)
T ss_pred HHHcCCHHHHHHHHHhhcCCeEEEEccCCCCCCC-CCCCHHHHHHhhhhcCcEEEEeCcEecCCcEEcHHHHHHHHHhCC
Confidence 134555554 37999999999965421 1111 1 112334444 4556665 36799999998885543
No 57
>PRK01170 phosphopantetheine adenylyltransferase/unknown domain fusion protein; Provisional
Probab=99.44 E-value=1.8e-13 Score=136.40 Aligned_cols=125 Identities=25% Similarity=0.379 Sum_probs=88.5
Q ss_pred EEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhcC--ccccEEEe---cCCcccc
Q 014503 67 RVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGL--KWVDEVIA---NAPYAIT 141 (423)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~--~~VD~vi~---~~p~~~~ 141 (423)
+|++.|+||.+|.||..+|++|+++|+.|+|||++|+.+..+|..| .++++|.++++++ +.++.+.. ..||..+
T Consensus 2 ~V~vgGTFD~lH~GH~~lL~~A~~~gd~LiVgvt~D~~~~~~k~~~-~~~e~R~~~v~~fl~~~~~~~~i~~i~D~~Gpt 80 (322)
T PRK01170 2 ITVVGGTFSKLHKGHKALLKKAIETGDEVVIGLTSDEYVRKNKVYP-IPYEDRKRKLENFIKKFTNKFRIRPIDDRYGNT 80 (322)
T ss_pred EEEEccccccCChHHHHHHHHHHHcCCEEEEEEccHHHHHhcCCCC-CCHHHHHHHHHHHHHhcCCcEEEEecCCCCCCC
Confidence 6999999999999999999999999999999999999887666667 9999999999984 44443322 3444322
Q ss_pred HHHHHHHHhhcCccEEEEcCCCCCCCCCCcHHHHHHhCC----cEEEecc---CC--CCCHHHHHHHHH
Q 014503 142 EQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVG----RYKQIKR---TE--GVSSTDIVGRIL 201 (423)
Q Consensus 142 ~efl~~ll~~~~~d~VV~G~D~~~g~~g~~~~~~lk~~g----~~~~v~r---~~--~iSST~Ir~rI~ 201 (423)
. ..-++|++|+|.+-..+. ...-+..++.| +++.++. .. .+|||+||+.-.
T Consensus 81 ~-------~~~~~d~IVVS~ET~~~~--~~IN~~R~e~Gl~pleIv~I~~v~~~d~~~iSSTrIr~~ei 140 (322)
T PRK01170 81 L-------YEEDYEIIVVSPETYQRA--LKINEIRIKNGLPPLKIVRVPYVLAEDLFPISSTRIINGEI 140 (322)
T ss_pred c-------ccCCCCEEEEeccccccH--HHHHHHHHHCCCCceEEEEEEeEEcCCCCcccHHHHhhhhc
Confidence 1 134799999999865432 22222333444 2333333 22 389999997543
No 58
>PRK13964 coaD phosphopantetheine adenylyltransferase; Provisional
Probab=99.44 E-value=6.2e-13 Score=117.96 Aligned_cols=89 Identities=22% Similarity=0.327 Sum_probs=74.2
Q ss_pred eEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHH-hhcccCeeEEcCC-CCch
Q 014503 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVL-ACRYVDEVIIGAP-WEVT 334 (423)
Q Consensus 257 ~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~-~~~~Vd~Vvi~~p-~~~~ 334 (423)
++++++|+|||+|.||++++++|.+++|+|+|++..+. .| .|+++.++|+.+++ +++..+.|.+... .+++
T Consensus 2 kiai~~GSFDPih~GHl~ii~~A~~~~D~v~v~v~~np----~K---~~~~s~e~R~~~l~~~~~~~~~v~v~~~~~~l~ 74 (140)
T PRK13964 2 KIAIYPGSFDPFHKGHLNILKKALKLFDKVYVVVSINP----DK---SNASDLDSRFKNVKNKLKDFKNVEVLINENKLT 74 (140)
T ss_pred eEEEEeeeeCCCCHHHHHHHHHHHHhCCEEEEEeccCC----CC---CCCCCHHHHHHHHHHHHcCCCCcEEecCcCCcH
Confidence 68999999999999999999999999999999998763 34 37899999998884 4566666665432 4678
Q ss_pred HHHHhhcCccEEEecCCc
Q 014503 335 KDMITTFNICLVVHGTVS 352 (423)
Q Consensus 335 ~~~i~~~~~d~vv~G~d~ 352 (423)
.++.++.+.+++|+|=..
T Consensus 75 v~~~~~~~a~~ivrGlR~ 92 (140)
T PRK13964 75 AEIAKKLGANFLIRSARN 92 (140)
T ss_pred HHHHHHCCCeEEEEecCC
Confidence 899999999999999543
No 59
>PF01467 CTP_transf_2: Cytidylyltransferase; InterPro: IPR004820 This family includes []: Cholinephosphate cytidyltransferase (P49585 from SWISSPROT). Glycerol-3-phosphate cytidyltransferase (P27623 from SWISSPROT). CTP:cholinephosphate cytidylyltransferase (CCT) is a key regulatory enzyme in phosphatidylcholine biosynthesis that catalyzes the formation of CDP-choline. A comparison of the catalytic domains of CCTs from a wide variety of organisms reveals a large number of completely conserved residues. There may be a role for the conserved HXGH sequence in catalysis. The membrane-binding domain in rat CCT has been defined, and it has been suggested that lipids may play a role in inactivating the enzyme. A phosphorylation domain has been described [].; GO: 0016779 nucleotidyltransferase activity, 0009058 biosynthetic process; PDB: 1O6B_A 1H1T_A 1B6T_A 1GN8_A 1QJC_A 3ELB_A 3NBK_A 3NBA_A 1TFU_A 3LCJ_A ....
Probab=99.44 E-value=1.6e-13 Score=121.14 Aligned_cols=62 Identities=40% Similarity=0.535 Sum_probs=46.5
Q ss_pred EEecccCcCcHHHHHHHHHHHHhcCe-eEEEEecchhhhccCCCCCCcHHHHHHHHhcCccccE
Q 014503 69 YMDGCFDLMHYGHANALRQAKALGDE-LVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDE 131 (423)
Q Consensus 69 ~~~G~FD~lH~GH~~lL~qA~~~~d~-LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~~VD~ 131 (423)
+++|+||++|.||..+|++|++.++. +++++.++...... ++++++.++|++|++.+...+.
T Consensus 1 l~~GsFdP~H~GH~~~l~~a~~~~~~~~vi~v~~~~~~~k~-~~~~~~~~~R~~ml~~~~~~~~ 63 (157)
T PF01467_consen 1 LFGGSFDPPHNGHLNLLREARELFDEDLVIVVPSDNSPHKD-KKPIFSFEERLEMLRAAFKDDP 63 (157)
T ss_dssp EEEE--TT--HHHHHHHHHHHHHSSESEEEEEEEEHHCHST-TSSSSTHHHHHHHHHHHHTTCT
T ss_pred CeeeEcCcccHHHHHHHHHHHHhcccccccccccccccccc-ccccCcHHHHHHHHHHHHhhcC
Confidence 57999999999999999999999986 57777777654321 2489999999999997666555
No 60
>TIGR01510 coaD_prev_kdtB pantetheine-phosphate adenylyltransferase, bacterial. This model describes pantetheine-phosphate adenylyltransferase, the penultimate enzyme of coenzyme A (CoA) biosynthesis in bacteria. It does not show any strong homology to eukaryotic enzymes of coenzyme A biosynthesis. This protein was previously designated KdtB and postulated (because of cytidyltransferase homology and proximity to kdtA) to be an enzyme of LPS biosynthesis, a cytidyltransferase for 3-deoxy-D-manno-2-octulosonic acid. However, no activity toward that compound was found with either CTP or ATP. The phylogenetic distribution of this enzyme is more consistent with coenzyme A biosynthesis than with LPS biosynthesis.
Probab=99.43 E-value=1.6e-12 Score=117.41 Aligned_cols=119 Identities=22% Similarity=0.266 Sum_probs=79.5
Q ss_pred EEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhcCcccc----EEEecCCccccH
Q 014503 67 RVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVD----EVIANAPYAITE 142 (423)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~~VD----~vi~~~p~~~~~ 142 (423)
+++++|+||++|.||+.++++|++.+|+|++++..+ +.| .+..+.++|++|++.+ ..| .|.... +++.
T Consensus 1 i~l~gGsFdP~H~GHl~l~~~a~~~~d~v~~~~~~~----p~k-~~~~~~~~R~~m~~~a-~~~~~~~~v~~~e--~yt~ 72 (155)
T TIGR01510 1 IALYPGSFDPVTNGHLDIIKRAAALFDEVIVAVAKN----PSK-KPLFSLEERVELIKDA-TKHLPNVRVDVFD--GLLV 72 (155)
T ss_pred CEEEEeecCCCcHHHHHHHHHHHHhCCEEEEEEcCC----CCC-CCCcCHHHHHHHHHHH-HhhCCCeEEcCcc--chHH
Confidence 378999999999999999999999999999998743 234 4788999999999975 233 222211 2344
Q ss_pred HHHHHHHhhcCccEEEEcCC-CCCCCCCCcHHHHHHh--CC-------cEEEeccCC---CCCHHHHHHHHHhc
Q 014503 143 QFMNRLFNEHKIDYIIHGDD-PCLLPDGTDAYALAKK--VG-------RYKQIKRTE---GVSSTDIVGRILSS 203 (423)
Q Consensus 143 efl~~ll~~~~~d~VV~G~D-~~~g~~g~~~~~~lk~--~g-------~~~~v~r~~---~iSST~Ir~rI~~~ 203 (423)
+++ +.++.++++.|-| |... . ..++. .. ..+.+.... .+|||.||+++..+
T Consensus 73 dt~----~~l~~~~~i~G~~~~~~~---~---~~~~~~~~~r~~~~~~~~i~~~~~~~~~~iSST~IR~~i~~g 136 (155)
T TIGR01510 73 DYA----KELGATFIVRGLRAATDF---E---YELQMALMNKHLAPEIETVFLMASPEYAFVSSSLVKEIASFG 136 (155)
T ss_pred HHH----HHcCCCEEEecCcchhhH---H---HHHHHHhhCcccccCCcEEEEeCCcchhhccHHHHHHHHHcC
Confidence 554 4667899999944 2110 0 11110 01 112222222 69999999999865
No 61
>TIGR01510 coaD_prev_kdtB pantetheine-phosphate adenylyltransferase, bacterial. This model describes pantetheine-phosphate adenylyltransferase, the penultimate enzyme of coenzyme A (CoA) biosynthesis in bacteria. It does not show any strong homology to eukaryotic enzymes of coenzyme A biosynthesis. This protein was previously designated KdtB and postulated (because of cytidyltransferase homology and proximity to kdtA) to be an enzyme of LPS biosynthesis, a cytidyltransferase for 3-deoxy-D-manno-2-octulosonic acid. However, no activity toward that compound was found with either CTP or ATP. The phylogenetic distribution of this enzyme is more consistent with coenzyme A biosynthesis than with LPS biosynthesis.
Probab=99.42 E-value=3.8e-12 Score=114.90 Aligned_cols=129 Identities=19% Similarity=0.280 Sum_probs=88.5
Q ss_pred EEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhh-cccCeeEEcCCCCchHH
Q 014503 258 VVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLAC-RYVDEVIIGAPWEVTKD 336 (423)
Q Consensus 258 iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~-~~Vd~Vvi~~p~~~~~~ 336 (423)
+++++|+|||+|.||+.++++|++.+|.|+++++.+ ..| .+..+.++|+.+++.+ ..-+.+.+.+....+.+
T Consensus 1 i~l~gGsFdP~H~GHl~l~~~a~~~~d~v~~~~~~~----p~k---~~~~~~~~R~~m~~~a~~~~~~~~v~~~e~yt~d 73 (155)
T TIGR01510 1 IALYPGSFDPVTNGHLDIIKRAAALFDEVIVAVAKN----PSK---KPLFSLEERVELIKDATKHLPNVRVDVFDGLLVD 73 (155)
T ss_pred CEEEEeecCCCcHHHHHHHHHHHHhCCEEEEEEcCC----CCC---CCCcCHHHHHHHHHHHHhhCCCeEEcCccchHHH
Confidence 578999999999999999999999999999999744 334 3778999999888765 44455555444457889
Q ss_pred HHhhcCccEEEecCCcCCCCCCCCCCChH-HHHH----hCCeEEEeCCC--CCCCHHHHHHHHHhch
Q 014503 337 MITTFNICLVVHGTVSETNTPLTGQSDPY-EVAK----SMGIFQLLESP--KSITTTSVAQRIIANH 396 (423)
Q Consensus 337 ~i~~~~~d~vv~G~d~~~~~~~~~~~d~~-~~~k----~~G~~~~i~~~--~~~Stt~Ii~RI~~~~ 396 (423)
.++.+++++++.|-+...+ + +....+ ...+ ....+..+..+ .++|||.|.+|+..+.
T Consensus 74 t~~~l~~~~~i~G~~~~~~-~--~~~~~~~~~~r~~~~~~~~i~~~~~~~~~~iSST~IR~~i~~g~ 137 (155)
T TIGR01510 74 YAKELGATFIVRGLRAATD-F--EYELQMALMNKHLAPEIETVFLMASPEYAFVSSSLVKEIASFGG 137 (155)
T ss_pred HHHHcCCCEEEecCcchhh-H--HHHHHHHhhCcccccCCcEEEEeCCcchhhccHHHHHHHHHcCC
Confidence 9999999999999542111 1 000000 0000 01222222322 2799999999998764
No 62
>TIGR00125 cyt_tran_rel cytidyltransferase-related domain. Protein families that contain at least one copy of this domain include citrate lyase ligase, pantoate-beta-alanine ligase, glycerol-3-phosphate cytidyltransferase, ADP-heptose synthase, phosphocholine cytidylyltransferase, lipopolysaccharide core biosynthesis protein KdtB, the bifunctional protein NadR, and a number whose function is unknown. Many of these proteins are known to use CTP or ATP and release pyrophosphate.
Probab=99.42 E-value=3.8e-13 Score=103.36 Aligned_cols=64 Identities=52% Similarity=0.768 Sum_probs=56.8
Q ss_pred EEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhcCcccc
Q 014503 67 RVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVD 130 (423)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~~VD 130 (423)
+++++|+||++|.||+.++++|+++++.+++++.+++...+.|..++++.++|.++++.+.+++
T Consensus 1 i~~~~G~Fdp~H~GH~~~l~~a~~~~~~~vv~i~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 64 (66)
T TIGR00125 1 RVIFVGTFDPFHLGHLDLLERAKELFDELIVGVGSDQFVNPLKGEPVFSLEERLEMLKALKYVD 64 (66)
T ss_pred CEEEcCccCCCCHHHHHHHHHHHHhCCEEEEEECchHhccccCCCCCCCHHHHHHHHHHhcccc
Confidence 4799999999999999999999999999999999987766555459999999999999987665
No 63
>PRK00071 nadD nicotinic acid mononucleotide adenylyltransferase; Provisional
Probab=99.41 E-value=2.5e-12 Score=120.88 Aligned_cols=135 Identities=23% Similarity=0.210 Sum_probs=89.9
Q ss_pred CCeEEEEecccCcCcHHHHHHHHHHHHhc--CeeEEEEecchhhhccCC-CCCCcHHHHHHHHhc-CccccEEEe-----
Q 014503 64 KRVRVYMDGCFDLMHYGHANALRQAKALG--DELVVGVVSDEEIIANKG-PPVLSMEERLALVSG-LKWVDEVIA----- 134 (423)
Q Consensus 64 ~~~~V~~~G~FD~lH~GH~~lL~qA~~~~--d~LiVgV~sd~~i~~~K~-~pi~t~eER~~~l~~-~~~VD~vi~----- 134 (423)
.+++++++|+|||+|.||+.++++|++.. +.+++.+++.+ ..|. +.+++.++|++|++. ++..+.+..
T Consensus 3 ~~~i~i~gGsFdP~H~GH~~l~~~a~~~~~~d~v~~~p~~~~---~~k~~~~~~~~~~R~~m~~~a~~~~~~~~v~~~E~ 79 (203)
T PRK00071 3 MKRIGLFGGTFDPPHYGHLAIAEEAAERLGLDEVWFLPNPGP---PHKPQKPLAPLEHRLAMLELAIADNPRFSVSDIEL 79 (203)
T ss_pred CcEEEEEeeCCCccCHHHHHHHHHHHHHcCCCEEEEEeCCCC---CCCCCCCCCCHHHHHHHHHHHhcCCCceEEeHHHH
Confidence 35688999999999999999999999876 77888777665 2343 468899999999984 233333332
Q ss_pred -cCCccccHHHHHHHHhhcCcc---EEEEcCC-CCCCCCCCcHHHHHHhCCcEEEecc----------------------
Q 014503 135 -NAPYAITEQFMNRLFNEHKID---YIIHGDD-PCLLPDGTDAYALAKKVGRYKQIKR---------------------- 187 (423)
Q Consensus 135 -~~p~~~~~efl~~ll~~~~~d---~VV~G~D-~~~g~~g~~~~~~lk~~g~~~~v~r---------------------- 187 (423)
.....+|.+.++.+.+.+ |+ ++++|.| +.....|.+..+.++ ...+..++|
T Consensus 80 ~~~~~syT~~tl~~l~~~~-p~~~~~fiiG~D~l~~l~~W~~~~~i~~-~~~~iv~~R~g~~~~~~~~~~~~~~~~~~~~ 157 (203)
T PRK00071 80 ERPGPSYTIDTLRELRARY-PDVELVFIIGADALAQLPRWKRWEEILD-LVHFVVVPRPGYPLEALALPALQQLLEAAGA 157 (203)
T ss_pred hCCCCCCHHHHHHHHHHHC-CCCcEEEEEcHHHhhhcccccCHHHHHH-hCcEEEEeCCCCCccccchhHHHHhhccCCC
Confidence 123455667777765555 44 8899988 333344554322332 333333333
Q ss_pred -------CCCCCHHHHHHHHHhc
Q 014503 188 -------TEGVSSTDIVGRILSS 203 (423)
Q Consensus 188 -------~~~iSST~Ir~rI~~~ 203 (423)
...||||+||+++.++
T Consensus 158 i~~~~~~~~~ISST~IR~~l~~g 180 (203)
T PRK00071 158 ITLLDVPLLAISSTAIRERIKEG 180 (203)
T ss_pred EEEEeCCCCccCHHHHHHHHHcC
Confidence 1249999999999854
No 64
>PRK06973 nicotinic acid mononucleotide adenylyltransferase; Provisional
Probab=99.39 E-value=3.7e-12 Score=123.05 Aligned_cols=103 Identities=25% Similarity=0.228 Sum_probs=72.6
Q ss_pred CeEEEEecccCcCcHHHHHHHHHHHHhc--CeeEEEEecchhhhccCCCCCCcHHHHHHHHhc-Ccc----------ccE
Q 014503 65 RVRVYMDGCFDLMHYGHANALRQAKALG--DELVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKW----------VDE 131 (423)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~~--d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~-~~~----------VD~ 131 (423)
+++++++|+||++|.||+.++++|.+.. |++++.+..++ ..| ....+.++|++|++. ++. .|.
T Consensus 22 ~~IgifGGSFdPiH~GHl~ia~~~~~~l~ld~v~~iP~~~p---p~K-~~~~~~~~Rl~M~~lAi~~~~~~~~~~~v~~~ 97 (243)
T PRK06973 22 RRIGILGGTFDPIHDGHLALARRFADVLDLTELVLIPAGQP---WQK-ADVSAAEHRLAMTRAAAASLVLPGVTVRVATD 97 (243)
T ss_pred ceEEEECCCCCCCcHHHHHHHHHHHHHcCCCEEEEEECCcC---CCC-CCCCCHHHHHHHHHHHHHhccCCCceEEEeHh
Confidence 4578999999999999999999999975 78888877654 344 567899999999973 111 112
Q ss_pred EEecCCccccHHHHHHHHhhcCcc---EEEEcCC-CCCCCCCCc
Q 014503 132 VIANAPYAITEQFMNRLFNEHKID---YIIHGDD-PCLLPDGTD 171 (423)
Q Consensus 132 vi~~~p~~~~~efl~~ll~~~~~d---~VV~G~D-~~~g~~g~~ 171 (423)
.+.....++|.+.++.+-++|.++ ++++|.| +.....|.+
T Consensus 98 Ei~~~g~syTidTL~~l~~~~~p~~~~~fiiG~D~l~~l~~W~~ 141 (243)
T PRK06973 98 EIEHAGPTYTVDTLARWRERIGPDASLALLIGADQLVRLDTWRD 141 (243)
T ss_pred hhhCCCCCcHHHHHHHHHHHcCCCCCEEEEEchhhHhhcCCccc
Confidence 222233456678888777777455 7889988 333344443
No 65
>cd02165 NMNAT Nicotinamide/nicotinate mononucleotide adenylyltransferase. Nicotinamide/nicotinate mononucleotide (NMN/ NaMN)adenylyltransferase (NMNAT). NMNAT represents the primary bacterial and eukaryotic adenylyltransferases for nicotinamide-nucleotide and for the deamido form, nicotinate nucleotide. It is an indispensable enzyme in the biosynthesis of NAD(+) and NADP(+). Nicotinamide-nucleotide adenylyltransferase synthesizes NAD via the salvage pathway, while nicotinate-nucleotide adenylyltransferase synthesizes the immediate precursor of NAD via the de novo pathway. Human NMNAT displays unique dual substrate specificity toward both NMN and NaMN, and can participate in both de novo and salvage pathways of NAD synthesis.
Probab=99.38 E-value=2.9e-12 Score=119.38 Aligned_cols=132 Identities=23% Similarity=0.223 Sum_probs=90.2
Q ss_pred EEEecccCcCcHHHHHHHHHHHHhc--CeeEEEEecchhhhccCCCCCCcHHHHHHHHhcC-ccccEEEe------cCCc
Q 014503 68 VYMDGCFDLMHYGHANALRQAKALG--DELVVGVVSDEEIIANKGPPVLSMEERLALVSGL-KWVDEVIA------NAPY 138 (423)
Q Consensus 68 V~~~G~FD~lH~GH~~lL~qA~~~~--d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~-~~VD~vi~------~~p~ 138 (423)
++++|+|||+|.||..++++|++.+ |++++.+..++ ..|+....+.++|++|++.+ .....+.. ....
T Consensus 2 ~i~gGsFdP~H~GH~~~~~~a~~~~~~d~v~~~~~~~~---~~k~~~~~~~~~R~~m~~~~~~~~~~i~v~~~e~~~~~~ 78 (192)
T cd02165 2 ALFGGSFDPPHLGHLAIAEEALEELGLDRVLLLPSANP---PHKPPKPASFEHRLEMLKLAIEDNPKFEVSDIEIKRDGP 78 (192)
T ss_pred eEEeeCCCCCCHHHHHHHHHHHHHcCCCEEEEEeCCCC---CCCCCCCCCHHHHHHHHHHHHcCCCCEEEeHHHHhCCCC
Confidence 6899999999999999999999998 88998876654 23445788999999999853 12222222 1224
Q ss_pred cccHHHHHHHHhhcC-cc-EEEEcCC-CCCCCCCCcHHHHHHhCCcEEEeccC--------------------------C
Q 014503 139 AITEQFMNRLFNEHK-ID-YIIHGDD-PCLLPDGTDAYALAKKVGRYKQIKRT--------------------------E 189 (423)
Q Consensus 139 ~~~~efl~~ll~~~~-~d-~VV~G~D-~~~g~~g~~~~~~lk~~g~~~~v~r~--------------------------~ 189 (423)
.+|.+.++.+.+.+. .+ ++++|.| +...+.|.+..+++ +...+..++|. .
T Consensus 79 ~~t~~tl~~l~~~~p~~~~~~liG~D~l~~~~~W~~~~~i~-~~~~~iv~~R~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (192)
T cd02165 79 SYTIDTLEELRERYPNAELYFIIGSDNLIRLPKWYDWEELL-SLVHLVVAPRPGYPIEDASLEKLLLPGGRIILLDNPLL 157 (192)
T ss_pred CCHHHHHHHHHHhccCCCEEEEEcHHHhhhcccccCHHHHH-HhCcEEEEeCCCCCcccchhhhhccCCCcEEEecCCcc
Confidence 456677777666552 33 7888988 44445666543333 33444444441 2
Q ss_pred CCCHHHHHHHHHhc
Q 014503 190 GVSSTDIVGRILSS 203 (423)
Q Consensus 190 ~iSST~Ir~rI~~~ 203 (423)
.||||.||+++.++
T Consensus 158 ~iSST~IR~~~~~g 171 (192)
T cd02165 158 NISSTEIRERLKNG 171 (192)
T ss_pred ccCHHHHHHHHHcC
Confidence 49999999999855
No 66
>cd02164 PPAT_CoAS phosphopantetheine adenylyltransferase domain of eukaryotic and archaeal bifunctional enzymes. The PPAT domain of the bifunctional enzyme with PPAT and DPCK functions. The final two steps of the CoA biosynthesis pathway are catalyzed by phosphopantetheine adenylyltransferase (PPAT) and dephospho-CoA (dPCoA) kinase (DPCK). The PPAT reaction involves the reversible adenylation of 4'-phosphopantetheine to form 3'-dPCoA and PPi, and DPCK catalyses phosphorylation of the 3'-hydroxy group of the ribose moiety of dPCoA. In eukaryotes the two enzymes are part of a large multienzyme complex . Studies in Corynebacterium ammoniagenes suggested that separate enzymes were present, and this was confirmed through identification of the bacterial PPAT/CoAD.
Probab=99.36 E-value=1.3e-12 Score=116.56 Aligned_cols=121 Identities=27% Similarity=0.330 Sum_probs=79.4
Q ss_pred EEEEecccCcCcHHHHHHHHHHHHhc-CeeEEEEecchhhhccCC--CCCCcHHHHHHHHhcCc-c----cc--EEEecC
Q 014503 67 RVYMDGCFDLMHYGHANALRQAKALG-DELVVGVVSDEEIIANKG--PPVLSMEERLALVSGLK-W----VD--EVIANA 136 (423)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~~~-d~LiVgV~sd~~i~~~K~--~pi~t~eER~~~l~~~~-~----VD--~vi~~~ 136 (423)
+|+++|+||++|.||+.+|++|.+++ +.+++|+++|+... .|. .++++.++|+++++.+- . +. .+-...
T Consensus 1 ~v~~GGtFD~lH~GH~~Ll~~a~~~~~d~v~vgvt~d~~~~-~k~~~~~i~s~e~R~~~l~~~l~~~~~~~~~~i~~i~d 79 (143)
T cd02164 1 KVAVGGTFDRLHDGHKILLSVAFLLAGEKLIIGVTSDELLK-NKSLKELIEPYEERIANLHEFLVDLKPTLKYEIVPIDD 79 (143)
T ss_pred CEEEcccCCCCCHHHHHHHHHHHHHhcCCcEEEEeCchhcc-cCCCCCCCCCHHHHHHHHHHHHHhcCCCceEEEEEccC
Confidence 48899999999999999999999998 78999999998443 343 36899999999998631 0 11 122244
Q ss_pred CccccHHHHHHHHhhcCccEEEEcCCCCCCCCCCcHHHHHH-hCC----cEEEecc------CCCCCHHHHHH
Q 014503 137 PYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAK-KVG----RYKQIKR------TEGVSSTDIVG 198 (423)
Q Consensus 137 p~~~~~efl~~ll~~~~~d~VV~G~D~~~g~~g~~~~~~lk-~~g----~~~~v~r------~~~iSST~Ir~ 198 (423)
||..+.. .-..|++|+...-..|. ...+..+ +.| +++.++. ...||||.||+
T Consensus 80 ~~Gpt~~-------~~~~d~lVVS~ET~~~~---~~iN~~R~~~gl~pl~i~~v~~v~~~~~~~kiSST~iR~ 142 (143)
T cd02164 80 PYGPTGT-------DPDLEAIVVSPETYPGA---LKINRKREENGLSPLEIVVVPLVKADEDGEKISSTRIRR 142 (143)
T ss_pred CCCCccc-------CCCCCEEEEcHHHhhhH---HHHHHHHHHCCCCceeEEEEEeeccCCCCCeecchhhhC
Confidence 5543321 12578899887644332 2233333 333 1333332 23499999995
No 67
>TIGR00482 nicotinate (nicotinamide) nucleotide adenylyltransferase. This model represents the predominant bacterial/eukaryotic adenylyltransferase for nicotinamide-nucleotide, its deamido form nicotinate nucleotide, or both. The first activity, nicotinamide-nucleotide adenylyltransferase (EC 2.7.7.1), synthesizes NAD by the salvage pathway, while the second, nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) synthesizes the immediate precursor of NAD by the de novo pathway. In E. coli, NadD activity is biased toward the de novo pathway while salvage activity is channeled through the multifunctional NadR protein, but this division of labor may be exceptional. The given name of this model, nicotinate (nicotinamide) nucleotide adenylyltransferase, reflects the lack of absolute specificity with respect to substrate amidation state in most species.
Probab=99.33 E-value=1.4e-11 Score=115.05 Aligned_cols=131 Identities=23% Similarity=0.246 Sum_probs=85.2
Q ss_pred EEecccCcCcHHHHHHHHHHHHhc--CeeEEEEecchhhhccCC-CCCCcHHHHHHHHhc-CccccEEEe------cCCc
Q 014503 69 YMDGCFDLMHYGHANALRQAKALG--DELVVGVVSDEEIIANKG-PPVLSMEERLALVSG-LKWVDEVIA------NAPY 138 (423)
Q Consensus 69 ~~~G~FD~lH~GH~~lL~qA~~~~--d~LiVgV~sd~~i~~~K~-~pi~t~eER~~~l~~-~~~VD~vi~------~~p~ 138 (423)
+++|+|||+|.||+.++++|.+.. |++++.+...+ +.|. +...+.++|++|++. +...+.+.. ....
T Consensus 1 i~gGsFdP~H~GHl~l~~~a~~~~~~d~v~~~p~~~~---p~k~~~~~~~~~~R~~m~~~a~~~~~~~~v~~~E~~~~~~ 77 (193)
T TIGR00482 1 LFGGSFDPIHYGHLLLAEEALDHLDLDKVIFVPTANP---PHKKTYEAASSHHRLAMLKLAIEDNPKFEVDDFEIKRGGP 77 (193)
T ss_pred CccccCCccCHHHHHHHHHHHHHcCCCEEEEEeCCCC---CCCCCCCCCCHHHHHHHHHHHHhcCCCEEEeHHHHhCCCC
Confidence 368999999999999999999985 67887777665 3343 345799999999983 333333222 1223
Q ss_pred cccHHHHHHHHhhcC-cc-EEEEcCC-CCCCCCCCcHHHHHHhCCcEEEeccC---------------------------
Q 014503 139 AITEQFMNRLFNEHK-ID-YIIHGDD-PCLLPDGTDAYALAKKVGRYKQIKRT--------------------------- 188 (423)
Q Consensus 139 ~~~~efl~~ll~~~~-~d-~VV~G~D-~~~g~~g~~~~~~lk~~g~~~~v~r~--------------------------- 188 (423)
++|.+.++.+-+++. .+ ++++|.| +.....|.+..++++ ...+..++|.
T Consensus 78 syT~~tl~~l~~~~p~~~~~~iiG~D~l~~l~~W~~~~~i~~-~~~~iv~~R~g~~~~~~~~~~~~~~~~~~~i~~~~~~ 156 (193)
T TIGR00482 78 SYTIDTLKHLKKKYPDVELYFIIGADALRSFPLWKDWQELLE-LVHLVIVPRPGYTLDKALLEKAILRMHHGNLTLLHNP 156 (193)
T ss_pred CCHHHHHHHHHHHCCCCeEEEEEcHHHhhhhccccCHHHHHH-hCcEEEEeCCCCCcchhhhHHHHhcccCCcEEEEcCC
Confidence 456677877766652 23 7888988 333345554333333 2333333331
Q ss_pred -CCCCHHHHHHHHHhc
Q 014503 189 -EGVSSTDIVGRILSS 203 (423)
Q Consensus 189 -~~iSST~Ir~rI~~~ 203 (423)
..||||+||+++.++
T Consensus 157 ~~~iSST~IR~~l~~g 172 (193)
T TIGR00482 157 RVPISSTEIRQRIRQG 172 (193)
T ss_pred ccccCHHHHHHHHHcC
Confidence 259999999999854
No 68
>cd02166 NMNAT_Archaea Nicotinamide/nicotinate mononucleotide adenylyltransferase, archaeal. This family of archaeal proteins exhibits nicotinamide-nucleotide adenylyltransferase (NMNAT) activity utilizing the salvage pathway to synthesize NAD. In some cases, the enzyme was tested and found also to have the activity of nicotinate-nucleotide adenylyltransferase an enzyme of NAD de novo biosynthesis, although with a higher Km. In some archaeal species, a number of proteins which are uncharacterized with respect to activity, are also present.
Probab=99.33 E-value=1.1e-11 Score=112.99 Aligned_cols=120 Identities=19% Similarity=0.209 Sum_probs=83.0
Q ss_pred EEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHH-hhcccC----eeEE--cCCC
Q 014503 259 VYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVL-ACRYVD----EVII--GAPW 331 (423)
Q Consensus 259 v~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~-~~~~Vd----~Vvi--~~p~ 331 (423)
+++.|+|||||.||+.++++|.+.+|+|+|+|.++.... +. .+-++.+||+.+++ +++.+| .|.+ .+..
T Consensus 2 ~v~~G~FdP~H~GHl~~i~~a~~~~d~l~v~v~s~~~~~--~~--~~~~~~~~R~~mi~~~~~~~~~~~~~v~v~~~~d~ 77 (163)
T cd02166 2 ALFIGRFQPFHLGHLKVIKWILEEVDELIIGIGSAQESH--TL--ENPFTAGERVLMIRRALEEEGIDLSRYYIIPVPDI 77 (163)
T ss_pred eEEeeccCCCCHHHHHHHHHHHHHCCEEEEEecCCCCCC--CC--CCCCCHHHHHHHHHHHHHhcCCCcCeEEEEecCCC
Confidence 689999999999999999999999999999998775432 22 23358899999998 678875 3333 2222
Q ss_pred CchHHHHhhc------CccEEEecCCcCCCCCCCCCCChHHHHHhCC-eEEEeCC--CCCCCHHHHHHHHHh
Q 014503 332 EVTKDMITTF------NICLVVHGTVSETNTPLTGQSDPYEVAKSMG-IFQLLES--PKSITTTSVAQRIIA 394 (423)
Q Consensus 332 ~~~~~~i~~~------~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G-~~~~i~~--~~~~Stt~Ii~RI~~ 394 (423)
. ..+.+.++ +.|+++.|.+|... .....| .+..++. .+++|+|.|.+.|..
T Consensus 78 ~-~~~~w~~~v~~~vp~~div~~g~~~~~~-----------~f~~~g~~v~~~p~~~~~~~s~t~iR~~~~~ 137 (163)
T cd02166 78 E-RNSLWVSYVESLTPPFDVVYSGNPLVAR-----------LFKEAGYEVRRPPMFNREEYSGTEIRRLMLG 137 (163)
T ss_pred C-chHHHHHHHHHHCCCCCEEEECchHHHH-----------hhhhcCCeEecCCcccCCCCCHHHHHHHHHc
Confidence 2 23444444 67988888643221 122344 3345665 347999999999864
No 69
>PRK05627 bifunctional riboflavin kinase/FMN adenylyltransferase; Reviewed
Probab=99.33 E-value=3e-11 Score=120.41 Aligned_cols=136 Identities=19% Similarity=0.187 Sum_probs=96.1
Q ss_pred EEEEcCeeccCCHHHHHHHHHHHhcCCEE---EEEEecChhhhhc---cCCCCCCCCHHHHHHHHHhhcccCeeEEcCCC
Q 014503 258 VVYIDGAFDLFHAGHVEILKKARQLGDFL---LVGIYTDQIVSEH---RGSYHPIMHLHERSLSVLACRYVDEVIIGAPW 331 (423)
Q Consensus 258 iv~~~G~FDl~H~GHi~~L~~A~~~gd~L---iVgv~~D~~v~~~---Kg~~~pi~~~~ER~~~v~~~~~Vd~Vvi~~p~ 331 (423)
.+++-|+||.+|.||..+|++|+++++.+ .+.++-|...+.. +...+++++.+||...+++|. ||.+++.+..
T Consensus 15 ~vv~iG~FDGvH~GHq~Ll~~a~~~a~~~~~~~~vitFd~~p~~~~~~~~~~~~l~t~eeR~~~l~~~g-VD~~~~~~F~ 93 (305)
T PRK05627 15 CVLTIGNFDGVHRGHQALLARAREIARERGLPSVVMTFEPHPREVFAPDKAPARLTPLRDKAELLAELG-VDYVLVLPFD 93 (305)
T ss_pred EEEEEeeCCcCCHHHHHHHHHHHHHHHhcCCCEEEEEecCCHHHHcCCCCCCcCCCCHHHHHHHHHHcC-CCEEEEecCC
Confidence 79999999999999999999999998765 3466666544332 222478999999999999998 9999884321
Q ss_pred -----CchHHHHhh-----cCccEEEecCCcCCCCCCCCCCChHH---HHHhCC-eEEEeCC----CCCCCHHHHHHHHH
Q 014503 332 -----EVTKDMITT-----FNICLVVHGTVSETNTPLTGQSDPYE---VAKSMG-IFQLLES----PKSITTTSVAQRII 393 (423)
Q Consensus 332 -----~~~~~~i~~-----~~~d~vv~G~d~~~~~~~~~~~d~~~---~~k~~G-~~~~i~~----~~~~Stt~Ii~RI~ 393 (423)
..++++++. ++++.+|.|.||.-..- ..-+... ..+..| ....++. ...+|||.|.+.|.
T Consensus 94 ~~~~~ls~e~Fi~~~l~~~l~~~~iVvG~Df~FG~~--~~G~~~~L~~~~~~~g~~v~~v~~~~~~~~~ISST~IR~~I~ 171 (305)
T PRK05627 94 EEFAKLSAEEFIEDLLVKGLNAKHVVVGFDFRFGKK--RAGDFELLKEAGKEFGFEVTIVPEVKEDGERVSSTAIRQALA 171 (305)
T ss_pred HHHhcCCHHHHHHHHHHhccCCCEEEECCCCCCCCC--CCCCHHHHHHHHHHcCcEEEEeccEecCCCcCchHHHHHHHH
Confidence 135567654 89999999999965421 1112211 222234 4455543 36799999998886
Q ss_pred hch
Q 014503 394 ANH 396 (423)
Q Consensus 394 ~~~ 396 (423)
...
T Consensus 172 ~G~ 174 (305)
T PRK05627 172 EGD 174 (305)
T ss_pred cCC
Confidence 544
No 70
>PRK08887 nicotinic acid mononucleotide adenylyltransferase; Provisional
Probab=99.31 E-value=1.4e-11 Score=113.47 Aligned_cols=132 Identities=16% Similarity=0.091 Sum_probs=87.7
Q ss_pred eEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhcC-ccc--cEEEe--------
Q 014503 66 VRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGL-KWV--DEVIA-------- 134 (423)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~-~~V--D~vi~-------- 134 (423)
++++++|+|||+|.||+.+++++ ...|++++.+.... +.+ ++..+.++|++|++.+ ... ..+..
T Consensus 3 ~i~ifGGSFDP~H~GHl~ia~~~-~~~d~v~~vP~~~~---~~~-k~~~~~~~R~~M~~~ai~~~~~~~~~v~~~E~~~~ 77 (174)
T PRK08887 3 KIAVFGSAFNPPSLGHKSVIESL-SHFDLVLLVPSIAH---AWG-KTMLDYETRCQLVDAFIQDLGLSNVQRSDIEQELY 77 (174)
T ss_pred eEEEeCCCCCCCCHHHHHHHHHh-hcCCEEEEEECCCC---ccc-CCCCCHHHHHHHHHHHHhccCCCceEEehHHhhhc
Confidence 57899999999999999999996 45688888765521 122 3677999999999842 111 12221
Q ss_pred -cCCccccHHHHHHHHhhcC-cc-EEEEcCC-CCCCCCCCcHHHHHHhCCcEEEeccCCCCCHHHHHHHHHhc
Q 014503 135 -NAPYAITEQFMNRLFNEHK-ID-YIIHGDD-PCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSS 203 (423)
Q Consensus 135 -~~p~~~~~efl~~ll~~~~-~d-~VV~G~D-~~~g~~g~~~~~~lk~~g~~~~v~r~~~iSST~Ir~rI~~~ 203 (423)
+.+..+|.++++.+.+++. .+ ++++|.| +.....|.+ ++.+.+...+...++...||||.||+++..+
T Consensus 78 ~~~~~~yT~~tl~~l~~~~p~~~~~~iiG~D~l~~l~~W~~-~~~i~~~~~l~~~~~~~~ISST~IR~~l~~g 149 (174)
T PRK08887 78 APDESVTTYALLTRLQELYPEADLTFVIGPDNFLKFAKFYK-ADEITQRWTVMACPEKVPIRSTDIRNALQNG 149 (174)
T ss_pred cCCCCcchHHHHHHHHHHCCCCeEEEEEccchHHHHHHhCC-HHHHHhhCeEEEeCCCCCcCHHHHHHHHHcC
Confidence 0222346677777666552 22 5777887 333334444 4444455567677776789999999999854
No 71
>cd02168 NMNAT_Nudix Nicotinamide/nicotinate mononucleotide adenylyltransferase of bifunctional proteins, also containing a Nudix hydrolase domain. N-terminal NMNAT (Nicotinamide/nicotinate mononucleotide adenylyltransferase) domain of a novel bifunctional enzyme endowed with NMN adenylyltransferase and Nudix hydrolase activities. This domain is highly homologous to the archeal NMN adenyltransferase that catalyzes NAD synthesis from NMN and ATP. NMNAT is an essential enzyme in the biosynthesis of NAD(+) and NADP(+). Nicotinamide-nucleotide adenylyltransferase synthesizes NAD via the salvage pathway, while nicotinate-nucleotide adenylyltransferase synthesizes the immediate precursor of NAD via the de novo pathway. The C-terminal domain of this enzyme shares homology with the archaeal ADP-ribose pyrophosphatase, a member of the 'Nudix' hydrolase family.
Probab=99.28 E-value=7.4e-12 Score=115.91 Aligned_cols=129 Identities=15% Similarity=0.122 Sum_probs=82.5
Q ss_pred EEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhcC-cc--cc--EEEe-cCC-ccc
Q 014503 68 VYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGL-KW--VD--EVIA-NAP-YAI 140 (423)
Q Consensus 68 V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~-~~--VD--~vi~-~~p-~~~ 140 (423)
++++|+||++|.||+.++++|.+.+++|+|++.+.+.. +.+ ++.++.+||++|++.+ .. +| .+.. ..| +.+
T Consensus 2 ~l~~GrF~P~H~GHl~~i~~a~~~~~~vii~i~s~~~~-~~~-~~p~~~~eR~~mi~~~~~~~~~~~~rv~i~pi~D~~~ 79 (181)
T cd02168 2 LVYIGRFQPFHNGHLAVVLIALEKAKKVIILIGSARTA-RNI-KNPWTSEEREVMIEAALSDAGADLARVHFRPLRDHLY 79 (181)
T ss_pred eEEeeccCCCCHHHHHHHHHHHHHCCeEEEEeCCCCCC-CCC-CCCcCHHHHHHHHHHHHhccCCCcceEEEEecCCCCC
Confidence 58999999999999999999999999999999876532 122 3568999999999873 21 11 2222 111 111
Q ss_pred -cHHHH---HHHHh---hcCccEEEEcCCCCCCCCCCcHHH-HHHhCCcEEEeccCCCCCHHHHHHHHHhc
Q 014503 141 -TEQFM---NRLFN---EHKIDYIIHGDDPCLLPDGTDAYA-LAKKVGRYKQIKRTEGVSSTDIVGRILSS 203 (423)
Q Consensus 141 -~~efl---~~ll~---~~~~d~VV~G~D~~~g~~g~~~~~-~lk~~g~~~~v~r~~~iSST~Ir~rI~~~ 203 (423)
+.-+. +..+. .-+++++++|.|+... ..+. ...+. .+..++..+.+|||.||++|..+
T Consensus 80 ~~~~W~~~v~~~v~~~~~~~~~i~~~g~~kd~~----~~~~~lfpe~-~~~~~p~~~~iSsT~IR~~i~~~ 145 (181)
T cd02168 80 SDNLWLAEVQQQVLEIAGGSASVGLVGHRKDAS----SYYLRSFPQW-DYLEVPNYPDLNATDIRRAYFEG 145 (181)
T ss_pred ChHHHHHHHHHhChHhhCCCCcEEEeCCccCCC----ccceeecCCc-CeecCccccccCHHHHHHHHHhc
Confidence 22222 22211 2366889999876321 1111 11222 23455666789999999999863
No 72
>PRK01153 nicotinamide-nucleotide adenylyltransferase; Provisional
Probab=99.26 E-value=8.4e-11 Score=108.22 Aligned_cols=127 Identities=20% Similarity=0.318 Sum_probs=82.7
Q ss_pred EEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhcC-c--cc--cEE-EecCC-cc
Q 014503 67 RVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGL-K--WV--DEV-IANAP-YA 139 (423)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~-~--~V--D~v-i~~~p-~~ 139 (423)
+++++|.||++|.||+.++++|.+.+|+|+|++.+... ..+....++.+||++|++.. . .+ +.+ +...| ..
T Consensus 2 ~gl~~G~F~P~H~GHl~~i~~a~~~~d~v~v~i~s~~~--~~~~~~p~~~~~R~~mi~~a~~~~~~~~~~~~~~pi~D~~ 79 (174)
T PRK01153 2 RALFIGRFQPFHKGHLEVIKWILEEVDELIIGIGSAQE--SHTLKNPFTAGERILMIRKALEEEGIDLSRYYIIPIPDIE 79 (174)
T ss_pred EEEEeeccCCCCHHHHHHHHHHHHhCCEEEEEecCCCC--CCCCCCCCCHHHHHHHHHHHHhcCCCCcceeeEecCCCcc
Confidence 68999999999999999999999999999998865432 12334457899999999842 1 12 122 22112 22
Q ss_pred ccHHHHHHHHhh-cCccEEEEcCCCCCCCCCCcHHHHHHhCC-cEEEec--cCCCCCHHHHHHHHHhc
Q 014503 140 ITEQFMNRLFNE-HKIDYIIHGDDPCLLPDGTDAYALAKKVG-RYKQIK--RTEGVSSTDIVGRILSS 203 (423)
Q Consensus 140 ~~~efl~~ll~~-~~~d~VV~G~D~~~g~~g~~~~~~lk~~g-~~~~v~--r~~~iSST~Ir~rI~~~ 203 (423)
....+...+... -.+|+|+.|+.| .....++.| ++...+ ...++|+|+||++|.++
T Consensus 80 ~~~~w~~~v~~~~~~~d~v~~~~~y--------~~~~f~~~g~~v~~~p~~~~~~iSsT~IR~~i~~g 139 (174)
T PRK01153 80 FNSIWVSHVESYTPPFDVVYTGNPL--------VARLFREAGYEVRQPPMFNREEYSGTEIRRRMIEG 139 (174)
T ss_pred hHHHHHHHHHHhCCCCCEEEECChH--------HHHhchhhCCeEecCCccccCCCCHHHHHHHHHcC
Confidence 333344333221 256899999643 122333444 345544 44679999999999754
No 73
>PRK13964 coaD phosphopantetheine adenylyltransferase; Provisional
Probab=99.24 E-value=2.9e-11 Score=107.35 Aligned_cols=87 Identities=24% Similarity=0.311 Sum_probs=65.5
Q ss_pred eEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhc-CccccEEEecCC-ccccHH
Q 014503 66 VRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKWVDEVIANAP-YAITEQ 143 (423)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~-~~~VD~vi~~~p-~~~~~e 143 (423)
+++++.|+|||+|.||+.++++|.+++|+++|++..++ .| +++++.++|+++++. ++....|-.... -.+..+
T Consensus 2 kiai~~GSFDPih~GHl~ii~~A~~~~D~v~v~v~~np----~K-~~~~s~e~R~~~l~~~~~~~~~v~v~~~~~~l~v~ 76 (140)
T PRK13964 2 KIAIYPGSFDPFHKGHLNILKKALKLFDKVYVVVSINP----DK-SNASDLDSRFKNVKNKLKDFKNVEVLINENKLTAE 76 (140)
T ss_pred eEEEEeeeeCCCCHHHHHHHHHHHHhCCEEEEEeccCC----CC-CCCCCHHHHHHHHHHHHcCCCCcEEecCcCCcHHH
Confidence 57899999999999999999999999999999998763 34 478999999999974 222233322111 123445
Q ss_pred HHHHHHhhcCccEEEEcC
Q 014503 144 FMNRLFNEHKIDYIIHGD 161 (423)
Q Consensus 144 fl~~ll~~~~~d~VV~G~ 161 (423)
|. ++.+++++|.|=
T Consensus 77 ~~----~~~~a~~ivrGl 90 (140)
T PRK13964 77 IA----KKLGANFLIRSA 90 (140)
T ss_pred HH----HHCCCeEEEEec
Confidence 55 577999999994
No 74
>PRK07152 nadD putative nicotinate-nucleotide adenylyltransferase; Validated
Probab=99.24 E-value=6.2e-11 Score=120.11 Aligned_cols=134 Identities=22% Similarity=0.146 Sum_probs=92.0
Q ss_pred CeEEEEecccCcCcHHHHHHHHHHHHh--cCeeEEEEecchhhhccCC-CCCCcHHHHHHHHhc-CccccEEE------e
Q 014503 65 RVRVYMDGCFDLMHYGHANALRQAKAL--GDELVVGVVSDEEIIANKG-PPVLSMEERLALVSG-LKWVDEVI------A 134 (423)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~--~d~LiVgV~sd~~i~~~K~-~pi~t~eER~~~l~~-~~~VD~vi------~ 134 (423)
+++++++|+|||+|.||+.++++|.+. .|++++.+...+ +.|. .+..+.++|++|++. ++..+.+. .
T Consensus 1 m~i~i~gGsFdP~H~GHl~la~~a~~~~~~d~v~~~p~~~~---p~K~~~~~~~~~~R~~m~~~a~~~~~~~~v~~~E~~ 77 (342)
T PRK07152 1 MKIAIFGGSFDPIHKGHINIAKKAIKKLKLDKLFFVPTYIN---PFKKKQKASNGEHRLNMLKLALKNLPKMEVSDFEIK 77 (342)
T ss_pred CeEEEEeeCCCCcCHHHHHHHHHHHHHhCCCEEEEEeCCCC---CCCCCCCCCCHHHHHHHHHHHHhhCCCeEEeHHHHh
Confidence 357899999999999999999999987 378888776654 3454 345556999999973 22222222 2
Q ss_pred cCCccccHHHHHHHHhhcCcc---EEEEcCC-CCCCCCCCcHHHHHHhCCcEEEeccC--------------------CC
Q 014503 135 NAPYAITEQFMNRLFNEHKID---YIIHGDD-PCLLPDGTDAYALAKKVGRYKQIKRT--------------------EG 190 (423)
Q Consensus 135 ~~p~~~~~efl~~ll~~~~~d---~VV~G~D-~~~g~~g~~~~~~lk~~g~~~~v~r~--------------------~~ 190 (423)
....++|.+.++.+-+++ |+ ++++|.| +.....|.+ ++.+-+...++.++|. ..
T Consensus 78 ~~~~syt~~tl~~l~~~~-p~~~~~~iiG~D~~~~l~~W~~-~~~l~~~~~~iv~~R~g~~~~~~~~~~~i~~~~~~~~~ 155 (342)
T PRK07152 78 RQNVSYTIDTIKYFKKKY-PNDEIYFIIGSDNLEKFKKWKN-IEEILKKVQIVVFKRKKNINKKNLKKYNVLLLKNKNLN 155 (342)
T ss_pred CCCCCcHHHHHHHHHHhC-CCCcEEEEecHHHhhhcccccC-HHHHHHhCCEEEEECCCCCcccccccCcEEEecCCccc
Confidence 222345667777665555 44 8889988 444556765 4555555676666662 24
Q ss_pred CCHHHHHHHHHhc
Q 014503 191 VSSTDIVGRILSS 203 (423)
Q Consensus 191 iSST~Ir~rI~~~ 203 (423)
||||+||+++..+
T Consensus 156 iSST~IR~~~~~~ 168 (342)
T PRK07152 156 ISSTKIRKGNLLG 168 (342)
T ss_pred cCHHHHHHHHHcC
Confidence 9999999999865
No 75
>PRK05379 bifunctional nicotinamide mononucleotide adenylyltransferase/ADP-ribose pyrophosphatase; Provisional
Probab=99.23 E-value=3.4e-11 Score=121.95 Aligned_cols=134 Identities=16% Similarity=0.168 Sum_probs=88.3
Q ss_pred CCeEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhcC-cccc--EEE-ecCCcc
Q 014503 64 KRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGL-KWVD--EVI-ANAPYA 139 (423)
Q Consensus 64 ~~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~-~~VD--~vi-~~~p~~ 139 (423)
+.++++++|.||++|.||+.++++|.+.+|+|+|++.+...-. .+ +..++.+||++|++.+ +.++ .+. ...|-.
T Consensus 5 ~~~~~~~~G~F~P~H~GHl~~i~~a~~~~d~l~v~i~s~~~~~-~~-~~~~~~~~R~~mi~~~~~~~~~~r~~~~pi~d~ 82 (340)
T PRK05379 5 RYDYLVFIGRFQPFHNGHLAVIREALSRAKKVIVLIGSADLAR-SI-KNPFSFEERAQMIRAALAGIDLARVTIRPLRDS 82 (340)
T ss_pred cceEEEEeeccCCCCHHHHHHHHHHHHHCCEEEEEEccCCCCC-cC-CCCCCHHHHHHHHHHHhhcCCCceEEEEECCCC
Confidence 4568999999999999999999999999999999998754221 22 3458999999999864 3232 222 212211
Q ss_pred -cc-H---HHHHHHHh---hcCccEEEEcCCCCCCCCCCcHHH-HHHhCCcEEEeccCCCCCHHHHHHHHHhcc
Q 014503 140 -IT-E---QFMNRLFN---EHKIDYIIHGDDPCLLPDGTDAYA-LAKKVGRYKQIKRTEGVSSTDIVGRILSSM 204 (423)
Q Consensus 140 -~~-~---efl~~ll~---~~~~d~VV~G~D~~~g~~g~~~~~-~lk~~g~~~~v~r~~~iSST~Ir~rI~~~~ 204 (423)
++ . ..++..+. ..++|++++|+|+.. ...|. ...+.| +..++..+++|+|+||++|..+-
T Consensus 83 ~~~~~~W~~~v~~~v~~~~~~~~~~~~~g~~~~~----~~~~~~~f~~~~-~~~~~~~~~~s~T~iR~~~~~~~ 151 (340)
T PRK05379 83 LYNDSLWLAEVQAAVAEHAGADARIGLIGHEKDA----SSYYLRSFPQWE-LVDVPNTEDLSATEIRDAYFEGR 151 (340)
T ss_pred CcChHHHHHHHHHHHHhccCCCCcEEEECCcCCC----ChHHHHhccccc-cccCCcccccCccHHHHHHHcCC
Confidence 12 2 22222221 257889999988721 11222 222333 33566678899999999998653
No 76
>COG1019 Predicted nucleotidyltransferase [General function prediction only]
Probab=99.22 E-value=7.2e-11 Score=104.34 Aligned_cols=127 Identities=27% Similarity=0.334 Sum_probs=87.3
Q ss_pred CCCeEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhc----Ccc-cc-EEEecC
Q 014503 63 KKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG----LKW-VD-EVIANA 136 (423)
Q Consensus 63 ~~~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~----~~~-VD-~vi~~~ 136 (423)
.+...|.++|+||.+|.||..||+.|..+|+.+++|++||+....++..++.|++.|++-|.. .+. -. .+-.+.
T Consensus 3 ~kfm~vavGGTFd~LH~GHk~LL~~A~~~G~~v~IGlTsDe~~k~~k~~~i~p~~~R~~~l~~fl~~~~~~~~~iv~i~D 82 (158)
T COG1019 3 IKFMKVAVGGTFDRLHDGHKKLLEVAFEIGDRVTIGLTSDELAKKKKKEKIEPYEVRLRNLRNFLESIKADYEEIVPIDD 82 (158)
T ss_pred ccceEEEecccchhhhhhHHHHHHHHHHhCCeEEEEEccHHHHHHhccccCCcHHHHHHHHHHHHHHhcCCcceEEEecC
Confidence 356789999999999999999999999999999999999998876666899999999998874 111 11 233467
Q ss_pred CccccHHHHHHHHhhcCccEEEEcCCCCCCCCCCcHHHHHH-hCC----cEEEecc-----CCCCCHHHHHHH
Q 014503 137 PYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAK-KVG----RYKQIKR-----TEGVSSTDIVGR 199 (423)
Q Consensus 137 p~~~~~efl~~ll~~~~~d~VV~G~D~~~g~~g~~~~~~lk-~~g----~~~~v~r-----~~~iSST~Ir~r 199 (423)
||..+.+ .-..+++|+...-.- +.-..+.++ +.| +++.++. ...+|||+||.-
T Consensus 83 p~G~t~~-------~~~~e~iVVS~ET~~---~Al~IN~~R~~~Gl~pL~I~~i~~v~aedg~~iSSTrIrrg 145 (158)
T COG1019 83 PYGPTVE-------DPDFEAIVVSPETYP---GALKINEIREKRGLPPLEIIVIDYVLAEDGKPISSTRIRRG 145 (158)
T ss_pred CCCCCCC-------cCceeEEEEccccch---hHHHHHHHHHHCCCCCeEEEEEehhhhhcCCccchhhhhhh
Confidence 7765532 114578888755221 111223333 333 2333433 124999999943
No 77
>cd02167 NMNAT_NadR Nicotinamide/nicotinate mononucleotide adenylyltransferase of bifunctional NadR-like proteins. NMNAT domain of NadR protein. The NadR protein (NadR) is a bifunctional enzyme possessing both NMN adenylytransferase (NMNAT) and ribosylnicotinamide kinase (RNK) activities. Its function is essential for the growth and survival of H. influenzae and thus may present a new highly specific anti-infectious drug target. The N-terminal domain that hosts the NMNAT activity is closely related to archaeal NMNAT. The bound NAD at the active site of the NMNAT domain reveals several critical interactions between NAD and the protein.The NMNAT domain of hiNadR defines yet another member of the pyridine nucleotide adenylyltransferase
Probab=99.19 E-value=1.5e-10 Score=104.88 Aligned_cols=127 Identities=20% Similarity=0.208 Sum_probs=80.2
Q ss_pred EEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhcC-ccccEE-E-----ecCCccc
Q 014503 68 VYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGL-KWVDEV-I-----ANAPYAI 140 (423)
Q Consensus 68 V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~-~~VD~v-i-----~~~p~~~ 140 (423)
++++|+||++|.||+.++++|.+.+|+|+|++.+.+... ..+..++.++|++|++.. ..-+.+ + .+.|+.-
T Consensus 2 gl~~G~F~P~H~GHl~li~~a~~~~d~v~vi~~~~~~~~--~~~~~~~~~~R~~mi~~a~~~~~~~~v~~~~~~d~~~~~ 79 (158)
T cd02167 2 GIVFGKFAPLHTGHVYLIYKALSQVDELLIIVGSDDTRD--DARTGLPLEKRLRWLREIFPDQENIVVHTLNEPDIPEYP 79 (158)
T ss_pred EEEeeccCCCCHHHHHHHHHHHHHCCEEEEEECCCCccc--ccCCCCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCCCc
Confidence 578999999999999999999999999999998876321 125678999999999853 221111 1 1223210
Q ss_pred --c---HHHHHHHHhhc---CccEEEEcCCCCCCCCCCcHHHHHHhCC-cEEE--ecc-CCCCCHHHHHHHHH
Q 014503 141 --T---EQFMNRLFNEH---KIDYIIHGDDPCLLPDGTDAYALAKKVG-RYKQ--IKR-TEGVSSTDIVGRIL 201 (423)
Q Consensus 141 --~---~efl~~ll~~~---~~d~VV~G~D~~~g~~g~~~~~~lk~~g-~~~~--v~r-~~~iSST~Ir~rI~ 201 (423)
- ...++..+.+. ++|+|+.|+++.. ..+......| +... ..+ ...+|+|.||+-..
T Consensus 80 ~~w~~w~~~v~~~v~~~~~~~~~~vf~~~~~~~-----~~~~~~~~~~~~~~~v~~~r~~~~iSaT~IR~~p~ 147 (158)
T cd02167 80 NGWDIWSNRVKTLIAENTRCRPDIVFTAEEYEA-----AFELVLAYLGAQVVLVDPDRTDISVSATQIRENPF 147 (158)
T ss_pred hhHHHHHHHHHHHHhhhcCCCCCEEEEccCcch-----hhhhHhhcCCCeEEEeccccccCCcCHHHHHhCHH
Confidence 1 12334444322 6889999988621 1111122233 3333 223 35799999997544
No 78
>cd02164 PPAT_CoAS phosphopantetheine adenylyltransferase domain of eukaryotic and archaeal bifunctional enzymes. The PPAT domain of the bifunctional enzyme with PPAT and DPCK functions. The final two steps of the CoA biosynthesis pathway are catalyzed by phosphopantetheine adenylyltransferase (PPAT) and dephospho-CoA (dPCoA) kinase (DPCK). The PPAT reaction involves the reversible adenylation of 4'-phosphopantetheine to form 3'-dPCoA and PPi, and DPCK catalyses phosphorylation of the 3'-hydroxy group of the ribose moiety of dPCoA. In eukaryotes the two enzymes are part of a large multienzyme complex . Studies in Corynebacterium ammoniagenes suggested that separate enzymes were present, and this was confirmed through identification of the bacterial PPAT/CoAD.
Probab=99.17 E-value=9.4e-11 Score=104.58 Aligned_cols=89 Identities=25% Similarity=0.352 Sum_probs=64.7
Q ss_pred EEEcCeeccCCHHHHHHHHHHHhcC-CEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhh-ccc------CeeEEcCC
Q 014503 259 VYIDGAFDLFHAGHVEILKKARQLG-DFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLAC-RYV------DEVIIGAP 330 (423)
Q Consensus 259 v~~~G~FDl~H~GHi~~L~~A~~~g-d~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~-~~V------d~Vvi~~p 330 (423)
|++.|+||++|.||..+|++|.+++ |+++|||++|+... .|....+++++++|+.++..+ ... +-+-+.+|
T Consensus 2 v~~GGtFD~lH~GH~~Ll~~a~~~~~d~v~vgvt~d~~~~-~k~~~~~i~s~e~R~~~l~~~l~~~~~~~~~~i~~i~d~ 80 (143)
T cd02164 2 VAVGGTFDRLHDGHKILLSVAFLLAGEKLIIGVTSDELLK-NKSLKELIEPYEERIANLHEFLVDLKPTLKYEIVPIDDP 80 (143)
T ss_pred EEEcccCCCCCHHHHHHHHHHHHHhcCCcEEEEeCchhcc-cCCCCCCCCCHHHHHHHHHHHHHhcCCCceEEEEEccCC
Confidence 7899999999999999999999998 89999999998443 333224699999999888765 222 23334566
Q ss_pred CCchHHHHhhcCccEEEecCC
Q 014503 331 WEVTKDMITTFNICLVVHGTV 351 (423)
Q Consensus 331 ~~~~~~~i~~~~~d~vv~G~d 351 (423)
+.++. ..-.+|.+|-..+
T Consensus 81 ~Gpt~---~~~~~d~lVVS~E 98 (143)
T cd02164 81 YGPTG---TDPDLEAIVVSPE 98 (143)
T ss_pred CCCcc---cCCCCCEEEEcHH
Confidence 66542 2235677776654
No 79
>cd02168 NMNAT_Nudix Nicotinamide/nicotinate mononucleotide adenylyltransferase of bifunctional proteins, also containing a Nudix hydrolase domain. N-terminal NMNAT (Nicotinamide/nicotinate mononucleotide adenylyltransferase) domain of a novel bifunctional enzyme endowed with NMN adenylyltransferase and Nudix hydrolase activities. This domain is highly homologous to the archeal NMN adenyltransferase that catalyzes NAD synthesis from NMN and ATP. NMNAT is an essential enzyme in the biosynthesis of NAD(+) and NADP(+). Nicotinamide-nucleotide adenylyltransferase synthesizes NAD via the salvage pathway, while nicotinate-nucleotide adenylyltransferase synthesizes the immediate precursor of NAD via the de novo pathway. The C-terminal domain of this enzyme shares homology with the archaeal ADP-ribose pyrophosphatase, a member of the 'Nudix' hydrolase family.
Probab=99.12 E-value=1.4e-10 Score=107.43 Aligned_cols=125 Identities=12% Similarity=0.139 Sum_probs=80.2
Q ss_pred EEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhh-cc--cC--eeEEcC-CCC
Q 014503 259 VYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLAC-RY--VD--EVIIGA-PWE 332 (423)
Q Consensus 259 v~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~-~~--Vd--~Vvi~~-p~~ 332 (423)
+++.|+|||||.||+.++++|.+.+|+|+|+|.+..... .+ ++.++.+||..|+..+ .. +| .|.+.+ +..
T Consensus 2 ~l~~GrF~P~H~GHl~~i~~a~~~~~~vii~i~s~~~~~-~~---~~p~~~~eR~~mi~~~~~~~~~~~~rv~i~pi~D~ 77 (181)
T cd02168 2 LVYIGRFQPFHNGHLAVVLIALEKAKKVIILIGSARTAR-NI---KNPWTSEEREVMIEAALSDAGADLARVHFRPLRDH 77 (181)
T ss_pred eEEeeccCCCCHHHHHHHHHHHHHCCeEEEEeCCCCCCC-CC---CCCcCHHHHHHHHHHHHhccCCCcceEEEEecCCC
Confidence 678999999999999999999999999999998775322 22 2446999999999875 32 12 333321 111
Q ss_pred -chHH-H---Hhh-------cCccEEEecCCcCCCCCCCCCCChHHHHHhCCeEEEeCCCCCCCHHHHHHHHHh
Q 014503 333 -VTKD-M---ITT-------FNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIA 394 (423)
Q Consensus 333 -~~~~-~---i~~-------~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~i~~~~~~Stt~Ii~RI~~ 394 (423)
...+ + +++ -++|+++.|.+++.+.+.... ....| +..++...++|+|.|.+++..
T Consensus 78 ~~~~~~W~~~v~~~v~~~~~~~~~i~~~g~~kd~~~~~~~l------fpe~~-~~~~p~~~~iSsT~IR~~i~~ 144 (181)
T cd02168 78 LYSDNLWLAEVQQQVLEIAGGSASVGLVGHRKDASSYYLRS------FPQWD-YLEVPNYPDLNATDIRRAYFE 144 (181)
T ss_pred CCChHHHHHHHHHhChHhhCCCCcEEEeCCccCCCccceee------cCCcC-eecCccccccCHHHHHHHHHh
Confidence 0111 1 112 256888889776433321111 01112 334555568999999999987
No 80
>PRK05379 bifunctional nicotinamide mononucleotide adenylyltransferase/ADP-ribose pyrophosphatase; Provisional
Probab=99.10 E-value=7e-10 Score=112.39 Aligned_cols=131 Identities=15% Similarity=0.235 Sum_probs=86.8
Q ss_pred CCCeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhh-cccC--eeEEcC-
Q 014503 254 PNARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLAC-RYVD--EVIIGA- 329 (423)
Q Consensus 254 ~~~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~-~~Vd--~Vvi~~- 329 (423)
+..+++++.|+|||||.||+.++++|.+.+|+|+|++.+...-.. + + +| ++.+||..+++.+ +.+| .|.+.+
T Consensus 4 ~~~~~~~~~G~F~P~H~GHl~~i~~a~~~~d~l~v~i~s~~~~~~-~-~-~~-~~~~~R~~mi~~~~~~~~~~r~~~~pi 79 (340)
T PRK05379 4 RRYDYLVFIGRFQPFHNGHLAVIREALSRAKKVIVLIGSADLARS-I-K-NP-FSFEERAQMIRAALAGIDLARVTIRPL 79 (340)
T ss_pred ccceEEEEeeccCCCCHHHHHHHHHHHHHCCEEEEEEccCCCCCc-C-C-CC-CCHHHHHHHHHHHhhcCCCceEEEEEC
Confidence 346899999999999999999999999999999999987543222 2 1 35 6999999888775 5443 333321
Q ss_pred CCCc-hHH----HHhh-------cCccEEEecCCcCCCCCCCCCCChHH-HHHhCCeEEEeCCCCCCCHHHHHHHHHhch
Q 014503 330 PWEV-TKD----MITT-------FNICLVVHGTVSETNTPLTGQSDPYE-VAKSMGIFQLLESPKSITTTSVAQRIIANH 396 (423)
Q Consensus 330 p~~~-~~~----~i~~-------~~~d~vv~G~d~~~~~~~~~~~d~~~-~~k~~G~~~~i~~~~~~Stt~Ii~RI~~~~ 396 (423)
+... ..+ .+++ -++|+++.|.++..+.+ |. .....|. ..++..+++|+|.|.++|+.+.
T Consensus 80 ~d~~~~~~~W~~~v~~~v~~~~~~~~~~~~~g~~~~~~~~-------~~~~f~~~~~-~~~~~~~~~s~T~iR~~~~~~~ 151 (340)
T PRK05379 80 RDSLYNDSLWLAEVQAAVAEHAGADARIGLIGHEKDASSY-------YLRSFPQWEL-VDVPNTEDLSATEIRDAYFEGR 151 (340)
T ss_pred CCCCcChHHHHHHHHHHHHhccCCCCcEEEECCcCCCChH-------HHHhcccccc-ccCCcccccCccHHHHHHHcCC
Confidence 1111 111 1221 46789999976533321 21 1112232 2566678899999999997644
No 81
>PRK07143 hypothetical protein; Provisional
Probab=99.06 E-value=6e-09 Score=102.63 Aligned_cols=136 Identities=18% Similarity=0.252 Sum_probs=97.5
Q ss_pred CCeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhhcccCeeEEcCCC---
Q 014503 255 NARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPW--- 331 (423)
Q Consensus 255 ~~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~~~Vd~Vvi~~p~--- 331 (423)
....+++-|.||-+|.||..+|++|++.++.++|...+++... .++...++++.+||...++++. ||.+++.+..
T Consensus 14 ~~~~vvaiG~FDGvH~GHq~Ll~~a~~~~~~~vV~tF~~P~~~-~~~~~~~l~~~~er~~~l~~~G-vd~~~~~~F~~~~ 91 (279)
T PRK07143 14 FEKPTFVLGGFESFHLGHLELFKKAKESNDEIVIVIFKNPENL-PKNTNKKFSDLNSRLQTLANLG-FKNIILLDFNEEL 91 (279)
T ss_pred CCCeEEEEccCCcCCHHHHHHHHHHHHCCCcEEEEEeCChHHh-cccCcccCCCHHHHHHHHHHCC-CCEEEEeCCCHHH
Confidence 3567999999999999999999999999999999888775432 2333457999999999999985 7888775421
Q ss_pred --CchHHHHhh---cCccEEEecCCcCCCCCCCCCCChHHHHHhCC-eEEEeC----CCCCCCHHHHHHHHHhc
Q 014503 332 --EVTKDMITT---FNICLVVHGTVSETNTPLTGQSDPYEVAKSMG-IFQLLE----SPKSITTTSVAQRIIAN 395 (423)
Q Consensus 332 --~~~~~~i~~---~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G-~~~~i~----~~~~~Stt~Ii~RI~~~ 395 (423)
..++++++. ++++.+|.|.|+.-.- ...-+. ...+..+ .+..++ ....+|||.|.+-|.+.
T Consensus 92 a~ls~e~Fi~~ll~l~~~~iVvG~Df~FG~--~r~G~~-~~L~~~~~~v~~v~~~~~~g~~ISST~IR~~l~~G 162 (279)
T PRK07143 92 QNLSGNDFIEKLTKNQVSFFVVGKDFRFGK--NASWNA-DDLKEYFPNVHIVEILKINQQKISTSLLKEFIEFG 162 (279)
T ss_pred hCCCHHHHHHHHHhcCCCEEEECCCcccCC--CCCCCH-HHHHHhCCcEEEeCCEEcCCcEEcHHHHHHHHHcC
Confidence 134566665 7999999999987552 122233 3344444 444443 23469999998766443
No 82
>cd09286 NMNAT_Eukarya Nicotinamide/nicotinate mononucleotide adenylyltransferase, Eukaryotic. Nicotinamide/nicotinate mononucleotide (NMN/ NaMN)adenylyltransferase (NMNAT). NMNAT represents the primary bacterial and eukaryotic adenylyltransferases for nicotinamide-nucleotide and for the deamido form, nicotinate nucleotide. It is an indispensable enzyme in the biosynthesis of NAD(+) and NADP(+). Nicotinamide-nucleotide adenylyltransferase synthesizes NAD via the salvage pathway, while nicotinate-nucleotide adenylyltransferase synthesizes the immediate precursor of NAD via the de novo pathway. Human NMNAT displays unique dual substrate specificity toward both NMN and NaMN, and can participate in both de novo and salvage pathways of NAD synthesis. This subfamily consists strictly of eukaryotic members and includes secondary structural elements not found in all NMNATs.
Probab=99.02 E-value=2.1e-09 Score=102.92 Aligned_cols=85 Identities=16% Similarity=0.144 Sum_probs=52.2
Q ss_pred EEEEecccCcCcHHHHHHHHHHHHhcC--e-e-EE-E-EecchhhhccCCCCCCcHHHHHHHHhc-CccccEE------E
Q 014503 67 RVYMDGCFDLMHYGHANALRQAKALGD--E-L-VV-G-VVSDEEIIANKGPPVLSMEERLALVSG-LKWVDEV------I 133 (423)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~~~d--~-L-iV-g-V~sd~~i~~~K~~pi~t~eER~~~l~~-~~~VD~v------i 133 (423)
..+++|+|||+|.||+.++++|.+..+ . + ++ + +.+-. ....| ....+.++|++|++- +.....+ +
T Consensus 2 ~~~~gGSFdPiH~gHl~ia~~a~~~l~~~~~~~~v~~~~~P~~-~~~~k-~~~~~~~~Rl~Ml~lai~~~~~~~v~~~E~ 79 (225)
T cd09286 2 VLLACGSFNPITNMHLRMFELARDHLHETGRYEVVGGIISPVN-DAYGK-KGLASAKHRVAMCRLAVQSSDWIRVDDWES 79 (225)
T ss_pred EEEeCcCcCCCcHHHHHHHHHHHHHHHhhcCceeEEEEEEeec-cCCCC-CCCCCHHHHHHHHHHHHccCCCEEEEehhc
Confidence 367899999999999999999988752 2 1 21 1 11211 11223 567899999999983 2222222 2
Q ss_pred ecCCccccHHHHHHHHhhcC
Q 014503 134 ANAPYAITEQFMNRLFNEHK 153 (423)
Q Consensus 134 ~~~p~~~~~efl~~ll~~~~ 153 (423)
....+.+|-+.++.+-+++.
T Consensus 80 ~~~~~syT~~TL~~l~~~~p 99 (225)
T cd09286 80 LQPEWMRTAKVLRHHREEIN 99 (225)
T ss_pred cCCccccHHHHHHHHHHHhc
Confidence 22234456677777666563
No 83
>cd02167 NMNAT_NadR Nicotinamide/nicotinate mononucleotide adenylyltransferase of bifunctional NadR-like proteins. NMNAT domain of NadR protein. The NadR protein (NadR) is a bifunctional enzyme possessing both NMN adenylytransferase (NMNAT) and ribosylnicotinamide kinase (RNK) activities. Its function is essential for the growth and survival of H. influenzae and thus may present a new highly specific anti-infectious drug target. The N-terminal domain that hosts the NMNAT activity is closely related to archaeal NMNAT. The bound NAD at the active site of the NMNAT domain reveals several critical interactions between NAD and the protein.The NMNAT domain of hiNadR defines yet another member of the pyridine nucleotide adenylyltransferase
Probab=99.02 E-value=5.4e-09 Score=94.79 Aligned_cols=128 Identities=18% Similarity=0.174 Sum_probs=82.7
Q ss_pred EEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhh-cccCeeEE---cCCCCc
Q 014503 258 VVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLAC-RYVDEVII---GAPWEV 333 (423)
Q Consensus 258 iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~-~~Vd~Vvi---~~p~~~ 333 (423)
++++.|+|||+|.||+.++++|.+.+|.|+|++.++.. .|.+ ++.++.++|+.+++.. +.-+.+.+ ..+...
T Consensus 1 igl~~G~F~P~H~GHl~li~~a~~~~d~v~vi~~~~~~---~~~~-~~~~~~~~R~~mi~~a~~~~~~~~v~~~~~~d~~ 76 (158)
T cd02167 1 IGIVFGKFAPLHTGHVYLIYKALSQVDELLIIVGSDDT---RDDA-RTGLPLEKRLRWLREIFPDQENIVVHTLNEPDIP 76 (158)
T ss_pred CEEEeeccCCCCHHHHHHHHHHHHHCCEEEEEECCCCc---cccc-CCCCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCC
Confidence 46889999999999999999999999999999998863 2333 4567999999888654 55444443 111111
Q ss_pred -----h---H----HHHhhc---CccEEEecCCcCCCCCCCCCCChHHHHHhCCe-EEEeC--C-CCCCCHHHHHHHHHh
Q 014503 334 -----T---K----DMITTF---NICLVVHGTVSETNTPLTGQSDPYEVAKSMGI-FQLLE--S-PKSITTTSVAQRIIA 394 (423)
Q Consensus 334 -----~---~----~~i~~~---~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~-~~~i~--~-~~~~Stt~Ii~RI~~ 394 (423)
- . ..+... ++|+++-|.++.... +......|. ...++ + ...+|+|.|.+-...
T Consensus 77 ~~~~~w~~w~~~v~~~v~~~~~~~~~~vf~~~~~~~~~--------~~~~~~~~~~~~~v~~~r~~~~iSaT~IR~~p~~ 148 (158)
T cd02167 77 EYPNGWDIWSNRVKTLIAENTRCRPDIVFTAEEYEAAF--------ELVLAYLGAQVVLVDPDRTDISVSATQIRENPFR 148 (158)
T ss_pred CCchhHHHHHHHHHHHHhhhcCCCCCEEEEccCcchhh--------hhHhhcCCCeEEEeccccccCCcCHHHHHhCHHH
Confidence 0 1 122221 678888887642221 111234443 33332 2 357999999987776
Q ss_pred chH
Q 014503 395 NHE 397 (423)
Q Consensus 395 ~~~ 397 (423)
+++
T Consensus 149 ~w~ 151 (158)
T cd02167 149 YWY 151 (158)
T ss_pred HHH
Confidence 665
No 84
>PRK08099 bifunctional DNA-binding transcriptional repressor/ NMN adenylyltransferase; Provisional
Probab=99.01 E-value=4.8e-09 Score=108.39 Aligned_cols=130 Identities=18% Similarity=0.225 Sum_probs=84.0
Q ss_pred CeEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhh-----hccCCCCCCcHHHHHHHHhcC-ccccEEE-e---
Q 014503 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEI-----IANKGPPVLSMEERLALVSGL-KWVDEVI-A--- 134 (423)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i-----~~~K~~pi~t~eER~~~l~~~-~~VD~vi-~--- 134 (423)
.++++++|+|||+|.||+.+|++|.++++.|+|+|.+++.- ...+.+..++.++|.++++.. +..+.|. .
T Consensus 52 ~~~~v~~G~FdP~H~GH~~lI~~A~~~~d~l~v~v~~~~~~~~~~~~~~~~~~~~s~~~R~~~l~~~~~~~~~v~v~~~~ 131 (399)
T PRK08099 52 KKIGVVFGKFYPLHTGHIYLIQRACSQVDELHIIICYDDERDRKLFEDSAMSQQPTVSDRLRWLLQTFKYQKNIKIHAFN 131 (399)
T ss_pred CcEEEEEEecCCCCHHHHHHHHHHHHHCCeeEEEEEccCCcchhhcccccccCCCCHHHHHHHHHHHhCCCCCEEEEecC
Confidence 35899999999999999999999999999999999887631 111225688999999999863 2322221 1
Q ss_pred --cCC-cccc-H---HHHHHHHhh--cCccEEEEcCCCCCCCCCCcHHHHHHhCC-cEEEec--c-CCCCCHHHHHHHHH
Q 014503 135 --NAP-YAIT-E---QFMNRLFNE--HKIDYIIHGDDPCLLPDGTDAYALAKKVG-RYKQIK--R-TEGVSSTDIVGRIL 201 (423)
Q Consensus 135 --~~p-~~~~-~---efl~~ll~~--~~~d~VV~G~D~~~g~~g~~~~~~lk~~g-~~~~v~--r-~~~iSST~Ir~rI~ 201 (423)
+.| |... . +.+..++.+ .++++++.|+++. .+.| ++..| +...++ | ..+||+|.||+--.
T Consensus 132 ~~~~~~~~~~~~~w~~~v~~~v~~~~~~~~~vf~~~~~d-----~~~~--~~~~~~~~~~vd~~r~~~~iSaT~IR~~p~ 204 (399)
T PRK08099 132 EEGMEPYPHGWDVWSNGIKAFMAEKGIQPDVIYTSEEQD-----APQY--EEHLGIETVLVDPKRTFMNISGTQIRENPF 204 (399)
T ss_pred CCCCCCCCccHHHHHHHHHHHHHhcCCCCCEEEEeCCCC-----hHHH--HHhcCCceeeeccccccCCcCHHHHhhCHH
Confidence 111 2111 1 333334433 3689999998761 1223 33322 343343 3 34799999997644
No 85
>PLN02388 phosphopantetheine adenylyltransferase
Probab=98.99 E-value=3e-09 Score=97.88 Aligned_cols=137 Identities=20% Similarity=0.271 Sum_probs=91.3
Q ss_pred CCCCCCeEEEEcCeeccCCHHHHHHHHHHHhcC-CEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhh-cc------c
Q 014503 251 GPGPNARVVYIDGAFDLFHAGHVEILKKARQLG-DFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLAC-RY------V 322 (423)
Q Consensus 251 ~~~~~~~iv~~~G~FDl~H~GHi~~L~~A~~~g-d~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~-~~------V 322 (423)
.+......|++.|+||.+|.||..+|.+|.+++ +.++||+++|+.... |.....++++++|...+.++ .. +
T Consensus 14 ~~~~~~~~Vv~gGtFDgLH~GHq~LL~~A~~~a~~~vvIgft~~p~l~~-k~~~~~I~~~e~R~~~l~~fl~~~~p~~~~ 92 (177)
T PLN02388 14 SPPNSYGAVVLGGTFDRLHDGHRLFLKAAAELARDRIVIGVCDGPMLSK-KQFAELIQPIEERMHNVEEYIKSIKPELVV 92 (177)
T ss_pred CCCCcCCeEEEEecCCccCHHHHHHHHHHHHhhhcCEEEecCCChhhcc-cCCCcccCCHHHHHHHHHHHHHHcCCCceE
Confidence 344456789999999999999999999999998 489999999997633 33236899999999888764 21 2
Q ss_pred CeeEEcCCCCchHHHHhhcCccEEEecCCcCCCCCCCCCCChHHHHHhCC----eEEEe-----C-CCCCCCHHHHHHHH
Q 014503 323 DEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMG----IFQLL-----E-SPKSITTTSVAQRI 392 (423)
Q Consensus 323 d~Vvi~~p~~~~~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G----~~~~i-----~-~~~~~Stt~Ii~RI 392 (423)
.-+-+.+|++++. ..-++|.+|-+.+-..+ +......-+..| .++.+ + ....+|||.|.+|.
T Consensus 93 ~i~~i~D~~Gpt~---~~~~~d~LVVS~ET~~g-----~~~IN~~R~e~Gl~pL~i~~v~~v~~~~~~~kiSST~iR~~~ 164 (177)
T PLN02388 93 QAEPIIDPYGPSI---VDENLEAIVVSKETLPG-----GLSVNKKRAERGLSQLKIEVVDIVPEESTGNKLSSTTLRRLE 164 (177)
T ss_pred EEEEecCCCCCcc---cCCCCCEEEEcHhHhhh-----HHHHHHHHHHCCCCCeEEEEEEeEecCCCCCccCHHHHHHHH
Confidence 3344567776542 23457778777653221 111112223344 11222 1 24679999999998
Q ss_pred Hhch
Q 014503 393 IANH 396 (423)
Q Consensus 393 ~~~~ 396 (423)
.++.
T Consensus 165 ~~~~ 168 (177)
T PLN02388 165 AEKA 168 (177)
T ss_pred HHHH
Confidence 7655
No 86
>PRK13670 hypothetical protein; Provisional
Probab=98.98 E-value=2e-09 Score=110.60 Aligned_cols=104 Identities=19% Similarity=0.310 Sum_probs=78.4
Q ss_pred EEEEecccCcCcHHHHHHHHHHHHhcC-eeEEEEecchhhhccCCCCCCcHHHHHHHHhcCccccEEEecCCcccc----
Q 014503 67 RVYMDGCFDLMHYGHANALRQAKALGD-ELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPYAIT---- 141 (423)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~~~d-~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~~VD~vi~~~p~~~~---- 141 (423)
.+=++-=|||+|.||+.+|++|++.+. .++++|.|-..+.+ ..+++++..+|.+++..+ +||.|++ .||.+.
T Consensus 3 ~~GIIaEfdg~H~GH~~~i~~a~~~a~~~~~~~Vmp~~f~qr-g~p~i~~~~~R~~~a~~~-GvD~vie-lpf~~a~~sa 79 (388)
T PRK13670 3 VTGIIVEYNPFHNGHLYHLNQAKKLTNADVTIAVMSGNFVQR-GEPAIVDKWTRAKMALEN-GVDLVVE-LPFLYSVQSA 79 (388)
T ss_pred eeEEEeeeCCcCHHHHHHHHHHHHHHhCCCcEEEecHHHhCC-CCCCCCCHHHHHHHHHHc-CCCEEEE-eCCchHhCCH
Confidence 344455699999999999999999762 45555555554433 226699999999999998 9999998 677654
Q ss_pred HHHHHH---HHhhcCccEEEEcCCCCCCCCCCcHHHHHHhCC
Q 014503 142 EQFMNR---LFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVG 180 (423)
Q Consensus 142 ~efl~~---ll~~~~~d~VV~G~D~~~g~~g~~~~~~lk~~g 180 (423)
++|++. ++++++++.||+|.| .++.+.++..+
T Consensus 80 e~F~~~aV~iL~~l~v~~lv~G~e-------~g~~~~L~~~~ 114 (388)
T PRK13670 80 DFFAEGAVSILDALGVDSLVFGSE-------SGDIEDFQKIA 114 (388)
T ss_pred HHHHHhHHHHHHHcCCCEEEEcCC-------CCCHHHHHHHH
Confidence 479887 778899999999999 23455555544
No 87
>PRK01153 nicotinamide-nucleotide adenylyltransferase; Provisional
Probab=98.97 E-value=5.7e-09 Score=96.13 Aligned_cols=124 Identities=22% Similarity=0.295 Sum_probs=78.8
Q ss_pred EEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhh-c--cc--CeeEEcC-C-
Q 014503 258 VVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLAC-R--YV--DEVIIGA-P- 330 (423)
Q Consensus 258 iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~-~--~V--d~Vvi~~-p- 330 (423)
++++.|+|||||.||+.++++|.+.+|+|+|+|.+... ..+.. +| ++.+||..+++.. . .+ +.+.+.. +
T Consensus 2 ~gl~~G~F~P~H~GHl~~i~~a~~~~d~v~v~i~s~~~--~~~~~-~p-~~~~~R~~mi~~a~~~~~~~~~~~~~~pi~D 77 (174)
T PRK01153 2 RALFIGRFQPFHKGHLEVIKWILEEVDELIIGIGSAQE--SHTLK-NP-FTAGERILMIRKALEEEGIDLSRYYIIPIPD 77 (174)
T ss_pred EEEEeeccCCCCHHHHHHHHHHHHhCCEEEEEecCCCC--CCCCC-CC-CCHHHHHHHHHHHHhcCCCCcceeeEecCCC
Confidence 47899999999999999999999999999999965431 11222 35 5899999888653 3 22 2333322 2
Q ss_pred CCchHHHHhhc-----CccEEEecCCcCCCCCCCCCCChHHHHHhCCe-EEEeC--CCCCCCHHHHHHHHHhch
Q 014503 331 WEVTKDMITTF-----NICLVVHGTVSETNTPLTGQSDPYEVAKSMGI-FQLLE--SPKSITTTSVAQRIIANH 396 (423)
Q Consensus 331 ~~~~~~~i~~~-----~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~-~~~i~--~~~~~Stt~Ii~RI~~~~ 396 (423)
......+.... ++|+++.|..+... .....|. ....+ ....+|+|.|.++|.+..
T Consensus 78 ~~~~~~w~~~v~~~~~~~d~v~~~~~y~~~-----------~f~~~g~~v~~~p~~~~~~iSsT~IR~~i~~g~ 140 (174)
T PRK01153 78 IEFNSIWVSHVESYTPPFDVVYTGNPLVAR-----------LFREAGYEVRQPPMFNREEYSGTEIRRRMIEGD 140 (174)
T ss_pred cchHHHHHHHHHHhCCCCCEEEECChHHHH-----------hchhhCCeEecCCccccCCCCHHHHHHHHHcCC
Confidence 12222233323 66888888532221 1123343 23333 346899999999997654
No 88
>COG0669 CoaD Phosphopantetheine adenylyltransferase [Coenzyme metabolism]
Probab=98.96 E-value=2.5e-09 Score=95.26 Aligned_cols=88 Identities=25% Similarity=0.407 Sum_probs=67.6
Q ss_pred CeEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhcC-ccccEEEecCCccccHH
Q 014503 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGL-KWVDEVIANAPYAITEQ 143 (423)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~-~~VD~vi~~~p~~~~~e 143 (423)
+++++.-|+|||++.||+.+|++|.++.|+++|+|.-++ .| +|+++.+||.++++.. +..+.|-. ..| + .
T Consensus 2 ~~iavypGSFDPiTnGHlDii~RA~~~Fd~viVaV~~np----~K-~plFsleER~~l~~~~~~~l~nV~V-~~f--~-~ 72 (159)
T COG0669 2 MKIAVYPGSFDPITNGHLDIIKRASALFDEVIVAVAINP----SK-KPLFSLEERVELIREATKHLPNVEV-VGF--S-G 72 (159)
T ss_pred CeeEEeCCCCCCCccchHHHHHHHHHhccEEEEEEEeCC----Cc-CCCcCHHHHHHHHHHHhcCCCceEE-Eec--c-c
Confidence 568999999999999999999999999999999998754 34 7999999999999852 23333322 112 1 2
Q ss_pred HHHHHHhhcCccEEEEcC
Q 014503 144 FMNRLFNEHKIDYIIHGD 161 (423)
Q Consensus 144 fl~~ll~~~~~d~VV~G~ 161 (423)
.+-++.++.++.++|-|=
T Consensus 73 Llvd~ak~~~a~~ivRGL 90 (159)
T COG0669 73 LLVDYAKKLGATVLVRGL 90 (159)
T ss_pred HHHHHHHHcCCCEEEEec
Confidence 333444678999999993
No 89
>PLN02945 nicotinamide-nucleotide adenylyltransferase/nicotinate-nucleotide adenylyltransferase
Probab=98.96 E-value=6.4e-09 Score=100.23 Aligned_cols=98 Identities=20% Similarity=0.202 Sum_probs=59.8
Q ss_pred CeEEEEecccCcCcHHHHHHHHHHHHhc--Cee-EEEEecchhhhccCCCCCCcHHHHHHHHh-cCcccc------EEEe
Q 014503 65 RVRVYMDGCFDLMHYGHANALRQAKALG--DEL-VVGVVSDEEIIANKGPPVLSMEERLALVS-GLKWVD------EVIA 134 (423)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~~--d~L-iVgV~sd~~i~~~K~~pi~t~eER~~~l~-~~~~VD------~vi~ 134 (423)
....+.+|+|||+|.||+.+++.|++.. +.+ +|.+...+.-...+.+...+.++|++|++ ++.... ..+.
T Consensus 22 ~~v~i~GGSFdP~H~gHl~ia~~a~~~l~~d~~~~v~~~~~P~~~~~~k~~~~~~~~Rl~Ml~lai~~~~~~~V~~~E~~ 101 (236)
T PLN02945 22 RVVLVATGSFNPPTYMHLRMFELARDALMSEGYHVLGGYMSPVNDAYKKKGLASAEHRIQMCQLACEDSDFIMVDPWEAR 101 (236)
T ss_pred eEEEEEcCCCCCCcHHHHHHHHHHHHHHhhcCcEEEEEEECCCCcccccCCCCCHHHHHHHHHHHhcCCCCeEecHHHhC
Confidence 3456778899999999999999888864 332 22222222111122246779999999997 222221 1223
Q ss_pred cCCccccHHHHHHHHhhcC-------cc---EEEEcCC
Q 014503 135 NAPYAITEQFMNRLFNEHK-------ID---YIIHGDD 162 (423)
Q Consensus 135 ~~p~~~~~efl~~ll~~~~-------~d---~VV~G~D 162 (423)
...+..|.+.++.+-++++ ++ ++++|.|
T Consensus 102 ~~~~syT~dtL~~l~~~~~~~~~~~~~~~~~~fiiG~D 139 (236)
T PLN02945 102 QSTYQRTLTVLARVETSLNNNGLASEESVRVMLLCGSD 139 (236)
T ss_pred CCCCccHHHHHHHHHHHhccccccCCCCceEEEEechh
Confidence 2334556677776666662 33 7889998
No 90
>COG1019 Predicted nucleotidyltransferase [General function prediction only]
Probab=98.89 E-value=3.3e-09 Score=93.93 Aligned_cols=126 Identities=21% Similarity=0.320 Sum_probs=84.4
Q ss_pred CCeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhh----ccc-C-eeEEc
Q 014503 255 NARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLAC----RYV-D-EVIIG 328 (423)
Q Consensus 255 ~~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~----~~V-d-~Vvi~ 328 (423)
+..+|.+.|+||.||.||-.+|..|..+|+.+++||+||+.++++|. +++.|++.|...|... +.= + -|-+.
T Consensus 4 kfm~vavGGTFd~LH~GHk~LL~~A~~~G~~v~IGlTsDe~~k~~k~--~~i~p~~~R~~~l~~fl~~~~~~~~~iv~i~ 81 (158)
T COG1019 4 KFMKVAVGGTFDRLHDGHKKLLEVAFEIGDRVTIGLTSDELAKKKKK--EKIEPYEVRLRNLRNFLESIKADYEEIVPID 81 (158)
T ss_pred cceEEEecccchhhhhhHHHHHHHHHHhCCeEEEEEccHHHHHHhcc--ccCCcHHHHHHHHHHHHHHhcCCcceEEEec
Confidence 35679999999999999999999999999999999999999988653 7999999999766552 211 1 34456
Q ss_pred CCCCchHHHHhhcCccEEEecCCcCCCCCCCCCCChHHHHHhCC----eEEEeC-----CCCCCCHHHHHH
Q 014503 329 APWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMG----IFQLLE-----SPKSITTTSVAQ 390 (423)
Q Consensus 329 ~p~~~~~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G----~~~~i~-----~~~~~Stt~Ii~ 390 (423)
+|++.+. ..-..|++|-..+-.. ......+.-.+.| .++.++ ....+|||.|.+
T Consensus 82 Dp~G~t~---~~~~~e~iVVS~ET~~-----~Al~IN~~R~~~Gl~pL~I~~i~~v~aedg~~iSSTrIrr 144 (158)
T COG1019 82 DPYGPTV---EDPDFEAIVVSPETYP-----GALKINEIREKRGLPPLEIIVIDYVLAEDGKPISSTRIRR 144 (158)
T ss_pred CCCCCCC---CcCceeEEEEccccch-----hHHHHHHHHHHCCCCCeEEEEEehhhhhcCCccchhhhhh
Confidence 7776542 2224566665543211 1111122223445 123332 335789998875
No 91
>PRK00071 nadD nicotinic acid mononucleotide adenylyltransferase; Provisional
Probab=98.87 E-value=4.2e-08 Score=92.30 Aligned_cols=95 Identities=19% Similarity=0.166 Sum_probs=67.4
Q ss_pred CeEEEEcCeeccCCHHHHHHHHHHHhcC--CEEEEEEecChhhhhccCCCCCCCCHHHHHHHHH-hhcccCeeEEcC---
Q 014503 256 ARVVYIDGAFDLFHAGHVEILKKARQLG--DFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVL-ACRYVDEVIIGA--- 329 (423)
Q Consensus 256 ~~iv~~~G~FDl~H~GHi~~L~~A~~~g--d~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~-~~~~Vd~Vvi~~--- 329 (423)
+++++++|+|||+|.||+.++++|++.. |.+++..+.... .|.. +.+++.++|+.+++ +++..+.+.+.+
T Consensus 4 ~~i~i~gGsFdP~H~GH~~l~~~a~~~~~~d~v~~~p~~~~~---~k~~-~~~~~~~~R~~m~~~a~~~~~~~~v~~~E~ 79 (203)
T PRK00071 4 KRIGLFGGTFDPPHYGHLAIAEEAAERLGLDEVWFLPNPGPP---HKPQ-KPLAPLEHRLAMLELAIADNPRFSVSDIEL 79 (203)
T ss_pred cEEEEEeeCCCccCHHHHHHHHHHHHHcCCCEEEEEeCCCCC---CCCC-CCCCCHHHHHHHHHHHhcCCCceEEeHHHH
Confidence 5799999999999999999999999876 888887776542 3332 46889999998885 457777666641
Q ss_pred ---CCCchHHHHhhc---Ccc---EEEecCCcCC
Q 014503 330 ---PWEVTKDMITTF---NIC---LVVHGTVSET 354 (423)
Q Consensus 330 ---p~~~~~~~i~~~---~~d---~vv~G~d~~~ 354 (423)
....+.+.++.+ -|+ +++.|.|.-.
T Consensus 80 ~~~~~syT~~tl~~l~~~~p~~~~~fiiG~D~l~ 113 (203)
T PRK00071 80 ERPGPSYTIDTLRELRARYPDVELVFIIGADALA 113 (203)
T ss_pred hCCCCCCHHHHHHHHHHHCCCCcEEEEEcHHHhh
Confidence 123344544433 354 6788977533
No 92
>cd02156 nt_trans nucleotidyl transferase superfamily. nt_trans (nucleotidyl transferase) This superfamily includes the class I amino-acyl tRNA synthetases, pantothenate synthetase (PanC), ATP sulfurylase, and the cytidylyltransferases, all of which have a conserved dinucleotide-binding domain.
Probab=98.85 E-value=1.9e-09 Score=90.81 Aligned_cols=58 Identities=22% Similarity=0.245 Sum_probs=50.9
Q ss_pred EEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhh
Q 014503 258 VVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLAC 319 (423)
Q Consensus 258 iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~ 319 (423)
+++++|+||++|.||+.++++|++++|.+++++..+.... .+ .++.+.++|...++++
T Consensus 1 ~~~~~G~Fdp~H~GH~~l~~~a~~~~d~~i~~i~~~~~~~---~~-~~~~~~~~R~~~l~~~ 58 (105)
T cd02156 1 KARFPGEPGYLHIGHAKLICRAKGIADQCVVRIDDNPPVK---VW-QDPHELEERKESIEED 58 (105)
T ss_pred CEEeCCCCCCCCHHHHHHHHHHHHhCCcEEEEEcCCCccc---cc-CChHHHHHHHHHHHHH
Confidence 3788999999999999999999999999999999887543 22 3689999999999988
No 93
>cd02165 NMNAT Nicotinamide/nicotinate mononucleotide adenylyltransferase. Nicotinamide/nicotinate mononucleotide (NMN/ NaMN)adenylyltransferase (NMNAT). NMNAT represents the primary bacterial and eukaryotic adenylyltransferases for nicotinamide-nucleotide and for the deamido form, nicotinate nucleotide. It is an indispensable enzyme in the biosynthesis of NAD(+) and NADP(+). Nicotinamide-nucleotide adenylyltransferase synthesizes NAD via the salvage pathway, while nicotinate-nucleotide adenylyltransferase synthesizes the immediate precursor of NAD via the de novo pathway. Human NMNAT displays unique dual substrate specificity toward both NMN and NaMN, and can participate in both de novo and salvage pathways of NAD synthesis.
Probab=98.83 E-value=4.7e-08 Score=91.08 Aligned_cols=93 Identities=16% Similarity=0.128 Sum_probs=65.7
Q ss_pred EEEEcCeeccCCHHHHHHHHHHHhcC--CEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhh-cccCeeEEcCC----
Q 014503 258 VVYIDGAFDLFHAGHVEILKKARQLG--DFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLAC-RYVDEVIIGAP---- 330 (423)
Q Consensus 258 iv~~~G~FDl~H~GHi~~L~~A~~~g--d~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~-~~Vd~Vvi~~p---- 330 (423)
+++++|+|||+|.||+.+++.|++.+ |.|+|.+..+. ..|+ .+.++.++|+.+++.+ +....+.+.+.
T Consensus 1 i~i~gGsFdP~H~GH~~~~~~a~~~~~~d~v~~~~~~~~---~~k~--~~~~~~~~R~~m~~~~~~~~~~i~v~~~e~~~ 75 (192)
T cd02165 1 IALFGGSFDPPHLGHLAIAEEALEELGLDRVLLLPSANP---PHKP--PKPASFEHRLEMLKLAIEDNPKFEVSDIEIKR 75 (192)
T ss_pred CeEEeeCCCCCCHHHHHHHHHHHHHcCCCEEEEEeCCCC---CCCC--CCCCCHHHHHHHHHHHHcCCCCEEEeHHHHhC
Confidence 57899999999999999999999999 99999887664 2343 4778999999888754 55666666321
Q ss_pred --CCchHHHHhhc---Cc--c-EEEecCCcCCC
Q 014503 331 --WEVTKDMITTF---NI--C-LVVHGTVSETN 355 (423)
Q Consensus 331 --~~~~~~~i~~~---~~--d-~vv~G~d~~~~ 355 (423)
...+.+.++.+ -| + +++.|.|...+
T Consensus 76 ~~~~~t~~tl~~l~~~~p~~~~~~liG~D~l~~ 108 (192)
T cd02165 76 DGPSYTIDTLEELRERYPNAELYFIIGSDNLIR 108 (192)
T ss_pred CCCCCHHHHHHHHHHhccCCCEEEEEcHHHhhh
Confidence 23344444443 23 3 45778775443
No 94
>PRK13793 nicotinamide-nucleotide adenylyltransferase; Provisional
Probab=98.82 E-value=1.8e-08 Score=94.14 Aligned_cols=59 Identities=14% Similarity=0.084 Sum_probs=50.9
Q ss_pred eEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhcC
Q 014503 66 VRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGL 126 (423)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~ 126 (423)
...+++|-|.++|.||+++|++|.+.||+|+|++.|...-... +.-+|..||.+|++..
T Consensus 5 d~~v~iGRFQPfH~GHl~~I~~al~~~devII~IGSA~~s~t~--~NPFTa~ER~~MI~~a 63 (196)
T PRK13793 5 DYLVFIGRFQPFHLAHMQTIEIALQQSRYVILALGSAQMERNI--KNPFLAIEREQMILSN 63 (196)
T ss_pred eEEEEEecCCCCcHHHHHHHHHHHHhCCEEEEEEccCCCCCCC--CCCCCHHHHHHHHHHh
Confidence 4789999999999999999999999999999999997643222 4568999999999873
No 95
>PRK08887 nicotinic acid mononucleotide adenylyltransferase; Provisional
Probab=98.82 E-value=4.6e-08 Score=90.08 Aligned_cols=131 Identities=13% Similarity=0.070 Sum_probs=82.3
Q ss_pred CeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhh-ccc--CeeEEcCCC-
Q 014503 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLAC-RYV--DEVIIGAPW- 331 (423)
Q Consensus 256 ~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~-~~V--d~Vvi~~p~- 331 (423)
+++++++|+|||+|.||+.+++++ ...|.+++..+... ..| ++..+.++|+.+++.+ +.. +.+.+.+.+
T Consensus 2 ~~i~ifGGSFDP~H~GHl~ia~~~-~~~d~v~~vP~~~~---~~~---k~~~~~~~R~~M~~~ai~~~~~~~~~v~~~E~ 74 (174)
T PRK08887 2 KKIAVFGSAFNPPSLGHKSVIESL-SHFDLVLLVPSIAH---AWG---KTMLDYETRCQLVDAFIQDLGLSNVQRSDIEQ 74 (174)
T ss_pred CeEEEeCCCCCCCCHHHHHHHHHh-hcCCEEEEEECCCC---ccc---CCCCCHHHHHHHHHHHHhccCCCceEEehHHh
Confidence 478999999999999999999996 46799988865421 112 3677999999888654 432 355552211
Q ss_pred --------CchHHHHhhcC---cc---EEEecCCcCCCCCCCCCCChHHHHHhCCeEEEeCCCCCCCHHHHHHHHHhch
Q 014503 332 --------EVTKDMITTFN---IC---LVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIANH 396 (423)
Q Consensus 332 --------~~~~~~i~~~~---~d---~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~i~~~~~~Stt~Ii~RI~~~~ 396 (423)
..|.+.++.++ |+ +++.|.|...+ +..|.. ...+.+ .-.+...++...+|+|.|.+++..++
T Consensus 75 ~~~~~~~~~yT~~tl~~l~~~~p~~~~~~iiG~D~l~~-l~~W~~-~~~i~~-~~~l~~~~~~~~ISST~IR~~l~~g~ 150 (174)
T PRK08887 75 ELYAPDESVTTYALLTRLQELYPEADLTFVIGPDNFLK-FAKFYK-ADEITQ-RWTVMACPEKVPIRSTDIRNALQNGK 150 (174)
T ss_pred hhccCCCCcchHHHHHHHHHHCCCCeEEEEEccchHHH-HHHhCC-HHHHHh-hCeEEEeCCCCCcCHHHHHHHHHcCC
Confidence 12334444332 32 35669875443 222222 222223 33344557667899999999997654
No 96
>PRK13671 hypothetical protein; Provisional
Probab=98.79 E-value=2.3e-08 Score=99.13 Aligned_cols=89 Identities=25% Similarity=0.421 Sum_probs=71.1
Q ss_pred EecccCcCcHHHHHHHHHHHHh--cCeeEEEEecchhhhccCC-CCCCcHHHHHHHHhcCccccEEEecCCcccc----H
Q 014503 70 MDGCFDLMHYGHANALRQAKAL--GDELVVGVVSDEEIIANKG-PPVLSMEERLALVSGLKWVDEVIANAPYAIT----E 142 (423)
Q Consensus 70 ~~G~FD~lH~GH~~lL~qA~~~--~d~LiVgV~sd~~i~~~K~-~pi~t~eER~~~l~~~~~VD~vi~~~p~~~~----~ 142 (423)
++-.|||+|.||..++++|++. +|.+++.+..++ ..|+ +.+++.++|++|+..+ +||.|++ .|+.+. +
T Consensus 5 IIaeFNP~H~GHl~~~~~a~~~~~~d~vi~vpSg~~---~qrg~pa~~~~~~R~~ma~~~-G~DLViE-LP~~~a~~sAe 79 (298)
T PRK13671 5 IIAEYNPFHNGHIYQINYIKNKFPNEKIIVILSGKY---TQRGEIAVASFEKRKKIALKY-GVDKVIK-LPFEYATQAAH 79 (298)
T ss_pred EEeeeCCccHHHHHHHHHHHHhcCCCEEEEEECcCC---CCCCCCCCCCHHHHHHHHHHc-CCCEEEe-ccHHHHhhchH
Confidence 4458999999999999999997 488888887776 3455 6677999999999998 9999998 665443 3
Q ss_pred HHHH---HHHhhcCccEEEEcCCC
Q 014503 143 QFMN---RLFNEHKIDYIIHGDDP 163 (423)
Q Consensus 143 efl~---~ll~~~~~d~VV~G~D~ 163 (423)
.|-. .++..+++|.++.|.++
T Consensus 80 ~FA~gaV~lL~~lgvd~l~FGsE~ 103 (298)
T PRK13671 80 IFAKGAIKKLNKEKIDKLIFGSES 103 (298)
T ss_pred HHHHHHHHHHHHcCCCEEEECCCC
Confidence 4432 37788999999999775
No 97
>cd02156 nt_trans nucleotidyl transferase superfamily. nt_trans (nucleotidyl transferase) This superfamily includes the class I amino-acyl tRNA synthetases, pantothenate synthetase (PanC), ATP sulfurylase, and the cytidylyltransferases, all of which have a conserved dinucleotide-binding domain.
Probab=98.73 E-value=1.3e-08 Score=85.63 Aligned_cols=57 Identities=23% Similarity=0.280 Sum_probs=49.8
Q ss_pred EEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhcC
Q 014503 68 VYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGL 126 (423)
Q Consensus 68 V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~ 126 (423)
+++.|+||++|.||+.++++|+++++.+++++..++.... ..++.+.++|.++++++
T Consensus 2 ~~~~G~Fdp~H~GH~~l~~~a~~~~d~~i~~i~~~~~~~~--~~~~~~~~~R~~~l~~~ 58 (105)
T cd02156 2 ARFPGEPGYLHIGHAKLICRAKGIADQCVVRIDDNPPVKV--WQDPHELEERKESIEED 58 (105)
T ss_pred EEeCCCCCCCCHHHHHHHHHHHHhCCcEEEEEcCCCcccc--cCChHHHHHHHHHHHHH
Confidence 7899999999999999999999999999999998875432 23689999999999985
No 98
>TIGR00482 nicotinate (nicotinamide) nucleotide adenylyltransferase. This model represents the predominant bacterial/eukaryotic adenylyltransferase for nicotinamide-nucleotide, its deamido form nicotinate nucleotide, or both. The first activity, nicotinamide-nucleotide adenylyltransferase (EC 2.7.7.1), synthesizes NAD by the salvage pathway, while the second, nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) synthesizes the immediate precursor of NAD by the de novo pathway. In E. coli, NadD activity is biased toward the de novo pathway while salvage activity is channeled through the multifunctional NadR protein, but this division of labor may be exceptional. The given name of this model, nicotinate (nicotinamide) nucleotide adenylyltransferase, reflects the lack of absolute specificity with respect to substrate amidation state in most species.
Probab=98.72 E-value=1.8e-07 Score=87.31 Aligned_cols=90 Identities=17% Similarity=0.142 Sum_probs=61.0
Q ss_pred EcCeeccCCHHHHHHHHHHHhcC--CEEEEEEecChhhhhccCCCCCCCCHHHHHHHHH-hhcccCeeEEcC------CC
Q 014503 261 IDGAFDLFHAGHVEILKKARQLG--DFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVL-ACRYVDEVIIGA------PW 331 (423)
Q Consensus 261 ~~G~FDl~H~GHi~~L~~A~~~g--d~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~-~~~~Vd~Vvi~~------p~ 331 (423)
++|+|||+|.||+.++++|.+.+ |.+++..+.+. ..|.. ....+.++|+.|++ +++..+.+.+.+ ..
T Consensus 2 ~gGsFdP~H~GHl~l~~~a~~~~~~d~v~~~p~~~~---p~k~~-~~~~~~~~R~~m~~~a~~~~~~~~v~~~E~~~~~~ 77 (193)
T TIGR00482 2 FGGSFDPIHYGHLLLAEEALDHLDLDKVIFVPTANP---PHKKT-YEAASSHHRLAMLKLAIEDNPKFEVDDFEIKRGGP 77 (193)
T ss_pred ccccCCccCHHHHHHHHHHHHHcCCCEEEEEeCCCC---CCCCC-CCCCCHHHHHHHHHHHHhcCCCEEEeHHHHhCCCC
Confidence 58999999999999999999875 77877666554 23432 34579999998886 667777766642 12
Q ss_pred CchHHHHhhc---Ccc---EEEecCCcCC
Q 014503 332 EVTKDMITTF---NIC---LVVHGTVSET 354 (423)
Q Consensus 332 ~~~~~~i~~~---~~d---~vv~G~d~~~ 354 (423)
..|.+.++.+ -|+ +++-|.|...
T Consensus 78 syT~~tl~~l~~~~p~~~~~~iiG~D~l~ 106 (193)
T TIGR00482 78 SYTIDTLKHLKKKYPDVELYFIIGADALR 106 (193)
T ss_pred CCHHHHHHHHHHHCCCCeEEEEEcHHHhh
Confidence 2344444443 343 4678877543
No 99
>cd00560 PanC Pantoate-beta-alanine ligase. PanC Pantoate-beta-alanine ligase, also known as pantothenate synthase, catalyzes the formation of pantothenate from pantoate and alanine. PanC belongs to a large superfamily of nucleotidyltransferases that includes , ATP sulfurylase (ATPS), phosphopantetheine adenylyltransferase (PPAT), and the amino-acyl tRNA synthetases. The enzymes of this family are structurally similar and share a dinucleotide-binding domain.
Probab=98.69 E-value=1.6e-08 Score=99.41 Aligned_cols=112 Identities=21% Similarity=0.267 Sum_probs=86.2
Q ss_pred eEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhcc-CC--CCCCcHHHHHHHHhcCccccEEEecCCcccc-
Q 014503 66 VRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIAN-KG--PPVLSMEERLALVSGLKWVDEVIANAPYAIT- 141 (423)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~-K~--~pi~t~eER~~~l~~~~~VD~vi~~~p~~~~- 141 (423)
-.|.+.|+ +|.||+.||++|++.++.++|.+..+|.-... .. +.+.+.++|+++++.+ +||.++....-.+.
T Consensus 25 g~V~TmG~---LH~GH~~LI~~a~~~a~~vVvtf~~nP~qf~~~ed~~~y~~t~e~d~~ll~~~-GvD~vF~p~~~~m~p 100 (277)
T cd00560 25 GFVPTMGA---LHEGHLSLVRRARAENDVVVVSIFVNPLQFGPNEDLDRYPRTLEADLALLEEA-GVDLLFAPSVEEMYP 100 (277)
T ss_pred EEEECCCc---ccHHHHHHHHHHHHhCCEEEEEecCChhhcCCcccccccCCCHHHHHHHHHHC-CCCEEECCCHHHcCC
Confidence 36778999 99999999999999999889998888754221 22 4588899999999997 99999642222222
Q ss_pred HHHHHHHHhhcCccEEEEcC----------------------C-CCCCCCCCcHHHHHHhCCc
Q 014503 142 EQFMNRLFNEHKIDYIIHGD----------------------D-PCLLPDGTDAYALAKKVGR 181 (423)
Q Consensus 142 ~efl~~ll~~~~~d~VV~G~----------------------D-~~~g~~g~~~~~~lk~~g~ 181 (423)
++|+..+.+..++..+++|. | ++||.++.+....+++.++
T Consensus 101 ~~f~~~~v~~~~~~~il~G~~RpghF~GV~tvv~kLf~iv~Pd~~~FG~kd~gq~~~Lk~~~~ 163 (277)
T cd00560 101 EGLFSTFVDVGPLSEVLEGASRPGHFRGVATVVAKLFNLVQPDRAYFGEKDAQQLAVIRRMVR 163 (277)
T ss_pred CCCceEEEecCCCceEEecCCCCccccceeeeehhhhcccCCCeEEECCCccccHHHHHHHHH
Confidence 35554333557889999999 9 9999999888888887654
No 100
>TIGR00124 cit_ly_ligase [citrate (pro-3S)-lyase] ligase. ATP is cleaved to AMP and pyrophosphate during the reaction. The carboxyl end is homologous to a number of cytidyltransferases that also release pyrophosphate.
Probab=98.67 E-value=2.4e-07 Score=93.63 Aligned_cols=129 Identities=21% Similarity=0.203 Sum_probs=86.9
Q ss_pred CeEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhc-CccccEE--EecCCcccc
Q 014503 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKWVDEV--IANAPYAIT 141 (423)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~-~~~VD~v--i~~~p~~~~ 141 (423)
.+++++.|+|||+|.||+.++++|.+++|.++|.|... + +++++.++|++|++. ++..+.| +...+|.++
T Consensus 139 ~~i~~~~g~fdP~t~GH~~li~~A~~~~d~~~v~v~~~------~-~~~f~~~~R~~~v~~~~~~~~nv~v~~~~~~~is 211 (332)
T TIGR00124 139 NKIGSIVMNANPFTNGHRYLIEQAARQCDWLHLFVVKE------D-ASLFSYDERFALVKQGIQDLSNVTVHNGSAYIIS 211 (332)
T ss_pred CcEEEEEeCcCCCchHHHHHHHHHHHHCCEEEEEEEeC------C-CCCCCHHHHHHHHHHHhcCCCCEEEEecCCceec
Confidence 47899999999999999999999999999999998632 2 579999999999985 2222222 222333222
Q ss_pred H------------------------HHHHHHHhhcCccEEEEcCCCCCCCCCCcHHH-HHH---------hCCcEEEecc
Q 014503 142 E------------------------QFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYA-LAK---------KVGRYKQIKR 187 (423)
Q Consensus 142 ~------------------------efl~~ll~~~~~d~VV~G~D~~~g~~g~~~~~-~lk---------~~g~~~~v~r 187 (423)
. -|-+.+-..+++..-.+|+.+..-. +..|+ .++ ..-++.+++|
T Consensus 212 ~atfp~yflk~~~~~~~~~~~ld~~~f~~~ia~~l~i~~r~vg~ep~~~~--t~~yn~~m~~~~~~~~~~~~I~~~~I~R 289 (332)
T TIGR00124 212 RATFPAYFLKEQDVADDCYTEIDLKLFRYKIAPALGITHRFVGTEPLCPV--TALYNQKMKYWLEEPNDAPPIEVVEIQR 289 (332)
T ss_pred cccchhhhcCChhHHHHHHHHHHHHHHHHhchHhhCCccceeCCCCCCHh--HHHHHHHHHHhhhccCCCCCcEEEEEee
Confidence 0 1222233457888888898864322 22343 233 1235778888
Q ss_pred C----CCCCHHHHHHHHHh
Q 014503 188 T----EGVSSTDIVGRILS 202 (423)
Q Consensus 188 ~----~~iSST~Ir~rI~~ 202 (423)
. ..+|.|.||+.|.+
T Consensus 290 ~~~~~~~~SASaIR~~L~~ 308 (332)
T TIGR00124 290 KLAAGGPISASTVRELLAK 308 (332)
T ss_pred ecCCCCeeCHHHHHHHHHc
Confidence 3 24999999999964
No 101
>PRK00380 panC pantoate--beta-alanine ligase; Reviewed
Probab=98.65 E-value=2e-08 Score=99.00 Aligned_cols=110 Identities=20% Similarity=0.226 Sum_probs=81.2
Q ss_pred EEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhcc-CC--CCCCcHHHHHHHHhcCccccEEEecCCcccc-H
Q 014503 67 RVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIAN-KG--PPVLSMEERLALVSGLKWVDEVIANAPYAIT-E 142 (423)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~-K~--~pi~t~eER~~~l~~~~~VD~vi~~~p~~~~-~ 142 (423)
-|.+.|+ +|.||+.+|++|++.++.++|.+.+++.-... .. +.+.|.++|.++++.+ +||.++....-.+. +
T Consensus 26 ~v~tmG~---lH~GH~~Li~~a~~~a~~vVvTf~~~P~qf~~~~~~~~~~~t~e~~~~ll~~~-GvD~v~~p~~~~myp~ 101 (281)
T PRK00380 26 LVPTMGA---LHEGHLSLVREARAEADIVVVSIFVNPLQFGPNEDLDRYPRTLEADLALLEAA-GVDLVFAPSVEEMYPQ 101 (281)
T ss_pred EEEccCc---eeHHHHHHHHHHHHhCCEEEEeCCCCHHHhCCCccccccCCCHHHHHHHHHHc-CCCEEEeCCHHHCCCc
Confidence 4567777 99999999999999999888888887754222 11 4688999999999998 89999874222222 2
Q ss_pred HHHHHHHhhcCccEEEEcC----------------------CC-CCCCCCCcHHHHHHhCCc
Q 014503 143 QFMNRLFNEHKIDYIIHGD----------------------DP-CLLPDGTDAYALAKKVGR 181 (423)
Q Consensus 143 efl~~ll~~~~~d~VV~G~----------------------D~-~~g~~g~~~~~~lk~~g~ 181 (423)
+|...++.. ++..+++|. |+ .||.+..+....+++.++
T Consensus 102 ~f~~~i~~~-~~~~vl~G~~RpghF~Gv~tvv~kLf~iv~Pd~a~FG~kd~qq~~~l~~~~~ 162 (281)
T PRK00380 102 GLQTYVSVP-GLSDVLEGASRPGHFRGVATVVTKLFNIVQPDVAYFGEKDYQQLAVIRRMVA 162 (281)
T ss_pred cceeEEEcc-cccccccCCCCCccccchhhHHHHHhhccCCCeeEECCCcchhHHHHHHHHH
Confidence 454433221 267899999 99 999988888888877653
No 102
>PRK08099 bifunctional DNA-binding transcriptional repressor/ NMN adenylyltransferase; Provisional
Probab=98.64 E-value=2.2e-07 Score=96.19 Aligned_cols=139 Identities=17% Similarity=0.222 Sum_probs=88.3
Q ss_pred CCCCCCCeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhh--ccC-CCCCCCCHHHHHHHHHhh-cccCee
Q 014503 250 KGPGPNARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSE--HRG-SYHPIMHLHERSLSVLAC-RYVDEV 325 (423)
Q Consensus 250 ~~~~~~~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~--~Kg-~~~pi~~~~ER~~~v~~~-~~Vd~V 325 (423)
+.|....+++++.|+|||+|.||+.++++|.+++|.|+|+|.++..-.+ .++ +....++.++|..+++.. +..+.|
T Consensus 46 ~~~~~~~~~~v~~G~FdP~H~GH~~lI~~A~~~~d~l~v~v~~~~~~~~~~~~~~~~~~~~s~~~R~~~l~~~~~~~~~v 125 (399)
T PRK08099 46 EFPRQMKKIGVVFGKFYPLHTGHIYLIQRACSQVDELHIIICYDDERDRKLFEDSAMSQQPTVSDRLRWLLQTFKYQKNI 125 (399)
T ss_pred ChhhhcCcEEEEEEecCCCCHHHHHHHHHHHHHCCeeEEEEEccCCcchhhcccccccCCCCHHHHHHHHHHHhCCCCCE
Confidence 3344456799999999999999999999999999999999988752100 010 114678999999888664 776666
Q ss_pred EEcC----CCC-ch----------HHHHhh--cCccEEEecCCcCCCCCCCCCCChHHHHHhCC-eEEEeCC---CCCCC
Q 014503 326 IIGA----PWE-VT----------KDMITT--FNICLVVHGTVSETNTPLTGQSDPYEVAKSMG-IFQLLES---PKSIT 384 (423)
Q Consensus 326 vi~~----p~~-~~----------~~~i~~--~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G-~~~~i~~---~~~~S 384 (423)
.+.. +.. .+ ...+.. .++|+++-|.++.. +.| .+..| .++.++. ..++|
T Consensus 126 ~v~~~~~~~~~~~~~~~~~w~~~v~~~v~~~~~~~~~vf~~~~~d~--------~~~--~~~~~~~~~~vd~~r~~~~iS 195 (399)
T PRK08099 126 KIHAFNEEGMEPYPHGWDVWSNGIKAFMAEKGIQPDVIYTSEEQDA--------PQY--EEHLGIETVLVDPKRTFMNIS 195 (399)
T ss_pred EEEecCCCCCCCCCccHHHHHHHHHHHHHhcCCCCCEEEEeCCCCh--------HHH--HHhcCCceeeeccccccCCcC
Confidence 5531 100 00 111222 26788988876421 123 23333 3444543 24688
Q ss_pred HHHHHHHHHhchHh
Q 014503 385 TTSVAQRIIANHEA 398 (423)
Q Consensus 385 tt~Ii~RI~~~~~~ 398 (423)
+|.|.+--..+++.
T Consensus 196 aT~IR~~p~~~w~~ 209 (399)
T PRK08099 196 GTQIRENPFRYWEY 209 (399)
T ss_pred HHHHhhCHHHHHHh
Confidence 88888776665543
No 103
>PRK13793 nicotinamide-nucleotide adenylyltransferase; Provisional
Probab=98.62 E-value=6.3e-08 Score=90.42 Aligned_cols=60 Identities=20% Similarity=0.351 Sum_probs=51.5
Q ss_pred CeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhh
Q 014503 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLAC 319 (423)
Q Consensus 256 ~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~ 319 (423)
..++++.|.|.|||.||++.|++|.+.||+|||||.|...-...| +|+ +..||.+|+...
T Consensus 4 yd~~v~iGRFQPfH~GHl~~I~~al~~~devII~IGSA~~s~t~~---NPF-Ta~ER~~MI~~a 63 (196)
T PRK13793 4 FDYLVFIGRFQPFHLAHMQTIEIALQQSRYVILALGSAQMERNIK---NPF-LAIEREQMILSN 63 (196)
T ss_pred eeEEEEEecCCCCcHHHHHHHHHHHHhCCEEEEEEccCCCCCCCC---CCC-CHHHHHHHHHHh
Confidence 467899999999999999999999999999999999876544443 566 999999888665
No 104
>PRK07152 nadD putative nicotinate-nucleotide adenylyltransferase; Validated
Probab=98.59 E-value=4.1e-07 Score=92.33 Aligned_cols=133 Identities=17% Similarity=0.155 Sum_probs=82.5
Q ss_pred CeEEEEcCeeccCCHHHHHHHHHHHhc--CCEEEEEEecChhhhhccCCCCCCCCHHHHHHHH-HhhcccCeeEEcCC--
Q 014503 256 ARVVYIDGAFDLFHAGHVEILKKARQL--GDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSV-LACRYVDEVIIGAP-- 330 (423)
Q Consensus 256 ~~iv~~~G~FDl~H~GHi~~L~~A~~~--gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v-~~~~~Vd~Vvi~~p-- 330 (423)
+++++++|+|||+|.||+.+.++|.+. .|.+++..+.+. ..|.. .+..+.++|+.|+ ++++..+.+.+.+.
T Consensus 1 m~i~i~gGsFdP~H~GHl~la~~a~~~~~~d~v~~~p~~~~---p~K~~-~~~~~~~~R~~m~~~a~~~~~~~~v~~~E~ 76 (342)
T PRK07152 1 MKIAIFGGSFDPIHKGHINIAKKAIKKLKLDKLFFVPTYIN---PFKKK-QKASNGEHRLNMLKLALKNLPKMEVSDFEI 76 (342)
T ss_pred CeEEEEeeCCCCcCHHHHHHHHHHHHHhCCCEEEEEeCCCC---CCCCC-CCCCCHHHHHHHHHHHHhhCCCeEEeHHHH
Confidence 368999999999999999999999976 488888776553 33432 3455568999888 45566666666321
Q ss_pred ----CCchHHHH---hhcCcc---EEEecCCcCCCCCCCCCCChHHHHHhCCeEEEeCC--------------------C
Q 014503 331 ----WEVTKDMI---TTFNIC---LVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLES--------------------P 380 (423)
Q Consensus 331 ----~~~~~~~i---~~~~~d---~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~i~~--------------------~ 380 (423)
...|.+.+ ++.-|+ +++-|.|...+ +..|. +...+.+.. .++.++| .
T Consensus 77 ~~~~~syt~~tl~~l~~~~p~~~~~~iiG~D~~~~-l~~W~-~~~~l~~~~-~~iv~~R~g~~~~~~~~~~~i~~~~~~~ 153 (342)
T PRK07152 77 KRQNVSYTIDTIKYFKKKYPNDEIYFIIGSDNLEK-FKKWK-NIEEILKKV-QIVVFKRKKNINKKNLKKYNVLLLKNKN 153 (342)
T ss_pred hCCCCCcHHHHHHHHHHhCCCCcEEEEecHHHhhh-ccccc-CHHHHHHhC-CEEEEECCCCCcccccccCcEEEecCCc
Confidence 12233433 333344 67889886554 21222 222332222 2222222 2
Q ss_pred CCCCHHHHHHHHHhc
Q 014503 381 KSITTTSVAQRIIAN 395 (423)
Q Consensus 381 ~~~Stt~Ii~RI~~~ 395 (423)
.++|||+|.+|+..+
T Consensus 154 ~~iSST~IR~~~~~~ 168 (342)
T PRK07152 154 LNISSTKIRKGNLLG 168 (342)
T ss_pred cccCHHHHHHHHHcC
Confidence 469999999998765
No 105
>PRK13671 hypothetical protein; Provisional
Probab=98.59 E-value=1.4e-07 Score=93.49 Aligned_cols=85 Identities=19% Similarity=0.289 Sum_probs=67.3
Q ss_pred CeeccCCHHHHHHHHHHHhc--CCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhhcccCeeEEcC-CCC-c-----
Q 014503 263 GAFDLFHAGHVEILKKARQL--GDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGA-PWE-V----- 333 (423)
Q Consensus 263 G~FDl~H~GHi~~L~~A~~~--gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~~~Vd~Vvi~~-p~~-~----- 333 (423)
-+|||||.||+.++++|++. +|.+|+....+. ..||. .++++.++|+.+++.+ .||-|+--+ ++. .
T Consensus 7 aeFNP~H~GHl~~~~~a~~~~~~d~vi~vpSg~~---~qrg~-pa~~~~~~R~~ma~~~-G~DLViELP~~~a~~sAe~F 81 (298)
T PRK13671 7 AEYNPFHNGHIYQINYIKNKFPNEKIIVILSGKY---TQRGE-IAVASFEKRKKIALKY-GVDKVIKLPFEYATQAAHIF 81 (298)
T ss_pred eeeCCccHHHHHHHHHHHHhcCCCEEEEEECcCC---CCCCC-CCCCCHHHHHHHHHHc-CCCEEEeccHHHHhhchHHH
Confidence 37999999999999999997 588888877775 34564 4677999999999998 799998421 111 1
Q ss_pred ---hHHHHhhcCccEEEecCCc
Q 014503 334 ---TKDMITTFNICLVVHGTVS 352 (423)
Q Consensus 334 ---~~~~i~~~~~d~vv~G~d~ 352 (423)
...++..+++|.++-|+++
T Consensus 82 A~gaV~lL~~lgvd~l~FGsE~ 103 (298)
T PRK13671 82 AKGAIKKLNKEKIDKLIFGSES 103 (298)
T ss_pred HHHHHHHHHHcCCCEEEECCCC
Confidence 3457889999999999975
No 106
>cd02169 Citrate_lyase_ligase Citrate lyase ligase. Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction.
Probab=98.59 E-value=5.2e-07 Score=89.84 Aligned_cols=131 Identities=15% Similarity=0.157 Sum_probs=87.2
Q ss_pred CCeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHh-hcccCeeEEcCCCC-
Q 014503 255 NARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA-CRYVDEVIIGAPWE- 332 (423)
Q Consensus 255 ~~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~-~~~Vd~Vvi~~p~~- 332 (423)
.++++-+-|+|||+|.||+.++++|.+.+|.++|.+... + .+.++.++|+.+++. ++..+.+.+....+
T Consensus 113 ~~~~~~~~~~FDPiH~GHl~ii~~a~~~~d~~~V~i~~~------~---~~~~~~e~R~~ml~~ai~~~~~v~v~~~~~l 183 (297)
T cd02169 113 GKKIAAIVMNANPFTLGHRYLVEKAAAENDWVHLFVVSE------D---KSLFSFADRFKLVKKGTKHLKNVTVHSGGDY 183 (297)
T ss_pred CCceEEEEecCCCCchHHHHHHHHHHhhCCeEEEEEEcC------C---CCCCCHHHHHHHHHHHhCCCCCEEEEecCCe
Confidence 468999999999999999999999999999999888643 1 478899999988765 45444333321111
Q ss_pred -------------------------chHHHH----hhcCccEEEecCCcCCCCCCCCCCChHHHHH---hCCe-EEEeC-
Q 014503 333 -------------------------VTKDMI----TTFNICLVVHGTVSETNTPLTGQSDPYEVAK---SMGI-FQLLE- 378 (423)
Q Consensus 333 -------------------------~~~~~i----~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k---~~G~-~~~i~- 378 (423)
.+.+|+ +++++..+|-|.|+....- ..++ ....+ ..|. +..++
T Consensus 184 ~v~~~~~~~~~~~~~~~~~~~~a~lsa~~Fi~iL~~~l~~~~ivvG~Df~FG~~-r~G~--~~l~~~~~~~gf~v~~v~~ 260 (297)
T cd02169 184 IISSATFPSYFIKEQDVVIKAQTALDARIFRKYIAPALNITKRYVGEEPFSRVT-AIYN--QTMQEELLSPAIEVIEIER 260 (297)
T ss_pred eeccccChhhhcCChhHHHHHHhcCCHHHHHHHHHHHcCCcEEEEcCCCCCCCc-chhH--HHHHHhcccCCCEEEEecc
Confidence 122333 4578999999999866531 1222 22222 2242 23332
Q ss_pred ---CCCCCCHHHHHHHHHhchH
Q 014503 379 ---SPKSITTTSVAQRIIANHE 397 (423)
Q Consensus 379 ---~~~~~Stt~Ii~RI~~~~~ 397 (423)
....+|||.|.+-|.+..-
T Consensus 261 ~~~~g~~ISST~IR~~l~~G~v 282 (297)
T cd02169 261 KKYDGQPISASTVRQLLKEGNL 282 (297)
T ss_pred cccCCcEEcHHHHHHHHHcCCH
Confidence 2356899999888766553
No 107
>COG1057 NadD Nicotinic acid mononucleotide adenylyltransferase [Coenzyme metabolism]
Probab=98.57 E-value=6e-07 Score=84.25 Aligned_cols=135 Identities=17% Similarity=0.174 Sum_probs=83.5
Q ss_pred CCeEEEEcCeeccCCHHHHHHHHHHHhcC--CEEEEEEecChhhhhccCCCCCCCCHHHHHHHH-HhhcccCeeEEc---
Q 014503 255 NARVVYIDGAFDLFHAGHVEILKKARQLG--DFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSV-LACRYVDEVIIG--- 328 (423)
Q Consensus 255 ~~~iv~~~G~FDl~H~GHi~~L~~A~~~g--d~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v-~~~~~Vd~Vvi~--- 328 (423)
++++++.+|+|||.|.||+.+.++|.+.. |.|+.-.+... .+|.. .+.-+.++|+.|+ ++|+.++...+.
T Consensus 2 ~~~i~lfGGsFdP~H~GHl~ia~~~~~~l~ld~vi~~ps~~~---p~k~~-~~~a~~~~R~~Ml~la~~~~~~~~v~~~e 77 (197)
T COG1057 2 MKKIALFGGSFDPPHYGHLLIAEEALDQLGLDKVIFLPSPVP---PHKKK-KELASAEHRLAMLELAIEDNPRFEVSDRE 77 (197)
T ss_pred CceEEEeccCCCCCCHHHHHHHHHHHHhcCCCeEEEecCCCC---CCCCC-ccCCCHHHHHHHHHHHHhcCCCcceeHHH
Confidence 47899999999999999999999998765 55555544332 33432 5789999999776 567766653331
Q ss_pred --C-CCCchHH---HHh-hcCccE---EEecCCcCCCCCCCCCCChHHHHHhCCeEEEeCCC------------------
Q 014503 329 --A-PWEVTKD---MIT-TFNICL---VVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESP------------------ 380 (423)
Q Consensus 329 --~-p~~~~~~---~i~-~~~~d~---vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~i~~~------------------ 380 (423)
. ....|.+ .++ .++||. ++-|.|...+ +..|. + ....-....++.++|+
T Consensus 78 ~~r~g~sYT~dTl~~~~~~~~p~~~~~fIiGaD~l~~-l~~W~-~-~~ell~~~~~vv~~Rp~~~~~~~~~~~~~~~~~~ 154 (197)
T COG1057 78 IKRGGPSYTIDTLEHLRQEYGPDVELYFIIGADNLAS-LPKWY-D-WDELLKLVTFVVAPRPGYGELELSLLSSGGAIIL 154 (197)
T ss_pred HHcCCCcchHHHHHHHHHHhCCCCcEEEEEehHHhhh-hhhhh-h-HHHHHHhCCEEEEecCCchhhhhhhhcCCceEEE
Confidence 1 1222333 344 667873 6889875443 21111 1 1112223333333322
Q ss_pred -----CCCCHHHHHHHHHhch
Q 014503 381 -----KSITTTSVAQRIIANH 396 (423)
Q Consensus 381 -----~~~Stt~Ii~RI~~~~ 396 (423)
.++|+|.|.+|+...+
T Consensus 155 ~~~~~~~ISSt~IR~~~~~~~ 175 (197)
T COG1057 155 LDLPRLDISSTEIRERIRRGA 175 (197)
T ss_pred ccCccccCchHHHHHHHhCCC
Confidence 2599999999997754
No 108
>TIGR00124 cit_ly_ligase [citrate (pro-3S)-lyase] ligase. ATP is cleaved to AMP and pyrophosphate during the reaction. The carboxyl end is homologous to a number of cytidyltransferases that also release pyrophosphate.
Probab=98.55 E-value=2e-07 Score=94.22 Aligned_cols=64 Identities=17% Similarity=0.229 Sum_probs=54.3
Q ss_pred CCeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHh-hcccCeeEE
Q 014503 255 NARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA-CRYVDEVII 327 (423)
Q Consensus 255 ~~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~-~~~Vd~Vvi 327 (423)
+.+++.+.|+|||||.||+.++++|.+++|.++|+|..+ + +++++.++|..+++. ++..+.|.+
T Consensus 138 ~~~i~~~~g~fdP~t~GH~~li~~A~~~~d~~~v~v~~~------~---~~~f~~~~R~~~v~~~~~~~~nv~v 202 (332)
T TIGR00124 138 GNKIGSIVMNANPFTNGHRYLIEQAARQCDWLHLFVVKE------D---ASLFSYDERFALVKQGIQDLSNVTV 202 (332)
T ss_pred CCcEEEEEeCcCCCchHHHHHHHHHHHHCCEEEEEEEeC------C---CCCCCHHHHHHHHHHHhcCCCCEEE
Confidence 468999999999999999999999999999999999732 2 579999999977755 566666555
No 109
>TIGR01526 nadR_NMN_Atrans nicotinamide-nucleotide adenylyltransferase, NadR type. E. coli NadR has also been found to regulate the import of its substrate, nicotinamide ribonucleotide, but it is not known if the other members of this model share that activity.
Probab=98.55 E-value=1.8e-07 Score=94.30 Aligned_cols=68 Identities=16% Similarity=0.164 Sum_probs=54.3
Q ss_pred CeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHh-hcccCe-eEE
Q 014503 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA-CRYVDE-VII 327 (423)
Q Consensus 256 ~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~-~~~Vd~-Vvi 327 (423)
++++++.|+|||+|.||+.++++|.+++|+|+|.+.+.. .++.+ .+.++.++|+.+++. |+.... |.+
T Consensus 1 ~~i~i~~GsFdP~H~GHl~ii~~a~~~~d~v~v~~~~~~---~~~~~-~~~~~~~~R~~~l~~~~~~~~~~v~v 70 (325)
T TIGR01526 1 KTIGVVFGKFYPLHTGHIYLIYEAFSKVDELHIVVGSLF---YDSKA-KRPPPVQDRLRWLREIFKYQKNQIFI 70 (325)
T ss_pred CcEEEEeeccCCCCHHHHHHHHHHHHHCCEEEEEECCCC---cCccC-CCCCCHHHHHHHHHHHhccCCCeEEE
Confidence 358999999999999999999999999999999998632 12111 578899999988854 577766 554
No 110
>TIGR01526 nadR_NMN_Atrans nicotinamide-nucleotide adenylyltransferase, NadR type. E. coli NadR has also been found to regulate the import of its substrate, nicotinamide ribonucleotide, but it is not known if the other members of this model share that activity.
Probab=98.49 E-value=2.5e-07 Score=93.27 Aligned_cols=57 Identities=25% Similarity=0.159 Sum_probs=49.3
Q ss_pred eEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhcc-CCCCCCcHHHHHHHHhc
Q 014503 66 VRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIAN-KGPPVLSMEERLALVSG 125 (423)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~-K~~pi~t~eER~~~l~~ 125 (423)
++++++|+|||+|.||+.++++|.+++|+|+|++.+.. ++ |..+.++.++|++|++.
T Consensus 2 ~i~i~~GsFdP~H~GHl~ii~~a~~~~d~v~v~~~~~~---~~~~~~~~~~~~~R~~~l~~ 59 (325)
T TIGR01526 2 TIGVVFGKFYPLHTGHIYLIYEAFSKVDELHIVVGSLF---YDSKAKRPPPVQDRLRWLRE 59 (325)
T ss_pred cEEEEeeccCCCCHHHHHHHHHHHHHCCEEEEEECCCC---cCccCCCCCCHHHHHHHHHH
Confidence 47899999999999999999999999999999997743 22 33678899999999975
No 111
>COG1056 NadR Nicotinamide mononucleotide adenylyltransferase [Coenzyme metabolism]
Probab=98.49 E-value=8.6e-07 Score=81.05 Aligned_cols=129 Identities=17% Similarity=0.156 Sum_probs=79.3
Q ss_pred CCeEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhc-Cc--ccc---EEEecCC
Q 014503 64 KRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG-LK--WVD---EVIANAP 137 (423)
Q Consensus 64 ~~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~-~~--~VD---~vi~~~p 137 (423)
++++.++.|.|-++|.||+.++++|.+..|+|+|++.|+..-... +.-+|..||..|++. ++ ++| .++.-.+
T Consensus 2 ~~~rgv~~GRFqP~H~GHl~vi~~al~~vDeliI~iGSa~~~~t~--~nPfTagER~~mi~~~L~~~~~~~r~~~~~v~d 79 (172)
T COG1056 2 RMKRGVYFGRFQPLHTGHLYVIKRALSKVDELIIVIGSAQESHTL--KNPFTAGERIPMIRDRLREAGLDLRVYLRPVFD 79 (172)
T ss_pred CceEEEEEeccCCccHhHHHHHHHHHHhCCEEEEEEccCcccccc--cCCCCccchhHHHHHHHHhcCCCceEEEEecCc
Confidence 467899999999999999999999999999999999998853322 356888999999884 22 334 2222222
Q ss_pred ccccHHHHHHHHhhcCccEEEE--cCCCCCCCCCCcHHHHHHhCCc-EEEecc--CCCCCHHHHHHHHHhc
Q 014503 138 YAITEQFMNRLFNEHKIDYIIH--GDDPCLLPDGTDAYALAKKVGR-YKQIKR--TEGVSSTDIVGRILSS 203 (423)
Q Consensus 138 ~~~~~efl~~ll~~~~~d~VV~--G~D~~~g~~g~~~~~~lk~~g~-~~~v~r--~~~iSST~Ir~rI~~~ 203 (423)
+..+.-++ ..++..-|.+-++ |+.| ...+....|. ....+- ....|.|.|+.+|+.+
T Consensus 80 ~~~n~i~v-~~v~~~~p~~~~~~~~n~~--------v~~lf~~~~~~~~~p~~f~~~e~~~t~ir~~~~~~ 141 (172)
T COG1056 80 IEYNDIWV-AYVEDLVPPFDVVYTWNPW--------VARLFHEKGEKVYYPPMFPRWEYSGTAIRRKMLGG 141 (172)
T ss_pred cccchhhH-HHHhhcCCCccccCCCCHH--------HHHHHhhcCceeecCCcccccccccchHHHHhhcC
Confidence 33332333 2223333332222 3222 1222223332 222222 2358999999998864
No 112
>smart00764 Citrate_ly_lig Citrate lyase ligase C-terminal domain. Proteins of this family contain the C-terminal domain of citrate lyase ligase EC:6.2.1.22.
Probab=98.47 E-value=2e-06 Score=79.87 Aligned_cols=123 Identities=14% Similarity=0.115 Sum_probs=78.6
Q ss_pred CeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhh-cccCeeEEcC-------CCC--
Q 014503 263 GAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLAC-RYVDEVIIGA-------PWE-- 332 (423)
Q Consensus 263 G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~-~~Vd~Vvi~~-------p~~-- 332 (423)
-.|||+|.||++++++|.+.+|.++|++.+. + .+.++.++|+.+++.. +..+.|.+.. |..
T Consensus 6 ~~~DPiH~GHl~i~~~a~~~~d~~~V~v~p~------~---~~~~s~e~R~~Mi~~a~~~~~~v~v~~~~~~~v~~~~~~ 76 (182)
T smart00764 6 MNANPFTLGHRYLVEQAAAECDWVHLFVVSE------D---ASLFSFDERFALVKKGTKDLDNVTVHSGSDYIISRATFP 76 (182)
T ss_pred ECCCCCCHHHHHHHHHHHHHCCceEEEEEeC------C---CCCCCHHHHHHHHHHHhccCCCEEEEecCCceeccccCh
Confidence 3699999999999999999999999888754 1 3567999999888653 5444333211 111
Q ss_pred -----------------chHHHH----hhcCccEEEecCCcCCCCCCCCCCChHHHH--HhCCe-EEEeCC----CCCCC
Q 014503 333 -----------------VTKDMI----TTFNICLVVHGTVSETNTPLTGQSDPYEVA--KSMGI-FQLLES----PKSIT 384 (423)
Q Consensus 333 -----------------~~~~~i----~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~--k~~G~-~~~i~~----~~~~S 384 (423)
.+++|+ +++++..++.|.|+..+.- ..+ +...+. ...|. ...+++ ...+|
T Consensus 77 ~~~~~~~~~~~~~~a~lsa~~Fi~~L~~~l~~~~ivvG~df~FG~~-~~G-~~~~L~~~~~~g~~v~~I~r~~~~g~~iS 154 (182)
T smart00764 77 SYFLKEQDVVIKSQTTLDLRIFRKYIAPALGITHRYVGEEPFSPVT-AIY-NQTMKQTLLSPAIEVVEIERKKANGQPIS 154 (182)
T ss_pred hhhcCchhHHHHHHhcCCHHHHHHHHHHHcCceEEEEcCCCCCCCC-Ccc-CHHHHHHHhhCCCEEEEEecccCCCcEEC
Confidence 122333 4579999999999876632 222 222211 22342 344443 35589
Q ss_pred HHHHHHHHHhch
Q 014503 385 TTSVAQRIIANH 396 (423)
Q Consensus 385 tt~Ii~RI~~~~ 396 (423)
+|.|.+-|.+..
T Consensus 155 ST~IR~~L~~G~ 166 (182)
T smart00764 155 ASTVRKLLKEGN 166 (182)
T ss_pred HHHHHHHHHcCC
Confidence 999988775433
No 113
>COG1056 NadR Nicotinamide mononucleotide adenylyltransferase [Coenzyme metabolism]
Probab=98.32 E-value=8e-07 Score=81.25 Aligned_cols=62 Identities=24% Similarity=0.276 Sum_probs=52.8
Q ss_pred CCeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHh-hc
Q 014503 255 NARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA-CR 320 (423)
Q Consensus 255 ~~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~-~~ 320 (423)
+++.+++-|.|.|||.||+..+++|.+..|.|||+|.||+.-...| +|+ +..||..++.. ++
T Consensus 2 ~~~rgv~~GRFqP~H~GHl~vi~~al~~vDeliI~iGSa~~~~t~~---nPf-TagER~~mi~~~L~ 64 (172)
T COG1056 2 RMKRGVYFGRFQPLHTGHLYVIKRALSKVDELIIVIGSAQESHTLK---NPF-TAGERIPMIRDRLR 64 (172)
T ss_pred CceEEEEEeccCCccHhHHHHHHHHHHhCCEEEEEEccCccccccc---CCC-CccchhHHHHHHHH
Confidence 4678999999999999999999999999999999999998654444 454 88999988874 44
No 114
>PRK06973 nicotinic acid mononucleotide adenylyltransferase; Provisional
Probab=98.31 E-value=6.5e-06 Score=79.79 Aligned_cols=60 Identities=17% Similarity=0.213 Sum_probs=47.5
Q ss_pred CCeEEEEcCeeccCCHHHHHHHHHHHhcC--CEEEEEEecChhhhhccCCCCCCCCHHHHHHHHH-hhc
Q 014503 255 NARVVYIDGAFDLFHAGHVEILKKARQLG--DFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVL-ACR 320 (423)
Q Consensus 255 ~~~iv~~~G~FDl~H~GHi~~L~~A~~~g--d~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~-~~~ 320 (423)
.++|++++|+|||.|.||+.+.++|.+.. |.+++..+.+. -.| .+..+.+.|+.|++ +++
T Consensus 21 ~~~IgifGGSFdPiH~GHl~ia~~~~~~l~ld~v~~iP~~~p---p~K---~~~~~~~~Rl~M~~lAi~ 83 (243)
T PRK06973 21 PRRIGILGGTFDPIHDGHLALARRFADVLDLTELVLIPAGQP---WQK---ADVSAAEHRLAMTRAAAA 83 (243)
T ss_pred CceEEEECCCCCCCcHHHHHHHHHHHHHcCCCEEEEEECCcC---CCC---CCCCCHHHHHHHHHHHHH
Confidence 35799999999999999999999998764 78877776653 234 36779999998885 444
No 115
>KOG3351 consensus Predicted nucleotidyltransferase [General function prediction only]
Probab=98.25 E-value=2.7e-06 Score=80.95 Aligned_cols=130 Identities=26% Similarity=0.289 Sum_probs=82.4
Q ss_pred CCCCeEEEEecccCcCcHHHHHHHHHHHHhc-CeeEEEEecchhhhccCC--CCCCcHHHHHHHHhc----Cc---cccE
Q 014503 62 KKKRVRVYMDGCFDLMHYGHANALRQAKALG-DELVVGVVSDEEIIANKG--PPVLSMEERLALVSG----LK---WVDE 131 (423)
Q Consensus 62 ~~~~~~V~~~G~FD~lH~GH~~lL~qA~~~~-d~LiVgV~sd~~i~~~K~--~pi~t~eER~~~l~~----~~---~VD~ 131 (423)
..+..++..+|+||-+|.||.-+|..|..++ ++++|||+.|+.+.. |. ..|-|.++|.+.+.. ++ .++.
T Consensus 139 a~~~~~~alGGTFDrLH~gHKvLLs~aa~la~~~lVvGV~d~elL~k-K~~~Eliepie~R~~~V~~Fl~~IKp~l~~~~ 217 (293)
T KOG3351|consen 139 ANKFMVVALGGTFDRLHDGHKVLLSVAAELASDRLVVGVTDDELLKK-KVLKELIEPIEERKEHVSNFLKSIKPDLNVRV 217 (293)
T ss_pred hhcceeEEeccchhhhccchHHHHHHHHHHhhceEEEEecChHHHHH-hHHHHHhhhHHHHHHHHHHHHHhcCCCceEEE
Confidence 3446789999999999999999999999998 899999998887642 33 468889999998875 22 1233
Q ss_pred EEecCCccccHHHHHHHHhhcCccEEEEcCCCCCCCCCCcHHHHHHhCC----cEEEeccCC---CCCHHHHHHHHH
Q 014503 132 VIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVG----RYKQIKRTE---GVSSTDIVGRIL 201 (423)
Q Consensus 132 vi~~~p~~~~~efl~~ll~~~~~d~VV~G~D~~~g~~g~~~~~~lk~~g----~~~~v~r~~---~iSST~Ir~rI~ 201 (423)
+=.-.||..+-. --..+++|+...-..|...-. ...+ +.| .+..+.-.. .+|+|++++...
T Consensus 218 vpi~Dp~GPt~~-------d~elE~lVVS~ET~~Ga~aVN-r~R~-E~glseLai~vVell~~~~kls~t~~~~~kv 285 (293)
T KOG3351|consen 218 VPIHDPFGPTIT-------DPELEALVVSEETKTGATAVN-RKRV-ERGLSELAIYVVELLYDAQKLSSTENRELKV 285 (293)
T ss_pred EecccCCCCCcc-------CCcceEEEEeeccccchhhhh-HHHH-HcCCchheEEEEeeccChhhcchhHHHHhhh
Confidence 323345543311 113567787766444432221 1111 122 134444433 389999886543
No 116
>TIGR00083 ribF riboflavin kinase/FMN adenylyltransferase. multifunctional enzyme: riboflavin kinase (EC 2.7.1.26) (flavokinase) / FMN adenylyltransferase (EC 2.7.7.2) (FAD pyrophosphorylase) (FAD synthetase).
Probab=98.25 E-value=6.6e-06 Score=81.64 Aligned_cols=135 Identities=13% Similarity=0.143 Sum_probs=82.5
Q ss_pred EEEcCeeccCCHHHHHHHHHHHhcCC-----EEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhhcccCeeEEcCCC--
Q 014503 259 VYIDGAFDLFHAGHVEILKKARQLGD-----FLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPW-- 331 (423)
Q Consensus 259 v~~~G~FDl~H~GHi~~L~~A~~~gd-----~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~~~Vd~Vvi~~p~-- 331 (423)
+++-|.||-+|.||..+|++|++.+. -.++........--......++++.+||...++++. ||.+++-+..
T Consensus 1 ~vaiG~FDGvH~GHq~Li~~~~~~a~~~~~~~~V~tF~phP~~~~~~~~~~~l~~~~~k~~~l~~~G-vd~~~~~~F~~~ 79 (288)
T TIGR00083 1 SLAIGYFDGLHLGHQALLQELKQIAEEKGLPPAVLLFEPHPSEQFNWLTAPALTPLEDKARQLQIKG-VEQLLVVVFDEE 79 (288)
T ss_pred CEEEEeCCccCHHHHHHHHHHHHHHHHhCCCEEEEEeCCChHHHhCccCCCCCCCHHHHHHHHHHcC-CCEEEEeCCCHH
Confidence 46779999999999999998886542 334444333221111111123999999999999985 9988885421
Q ss_pred ---CchHHHHh-----hcCccEEEecCCcCCCCCCCCCCChHHH---HHhCCeEEEe-C---CCCCCCHHHHHHHHHhch
Q 014503 332 ---EVTKDMIT-----TFNICLVVHGTVSETNTPLTGQSDPYEV---AKSMGIFQLL-E---SPKSITTTSVAQRIIANH 396 (423)
Q Consensus 332 ---~~~~~~i~-----~~~~d~vv~G~d~~~~~~~~~~~d~~~~---~k~~G~~~~i-~---~~~~~Stt~Ii~RI~~~~ 396 (423)
..++++++ ++++..+|.|.|+.-.-- ..-+...+ .+..|..+.+ + ....+|||.|.+-|.+..
T Consensus 80 ~a~ls~e~Fi~~~l~~~l~~~~ivvG~Df~FG~~--~~G~~~~L~~~~~~~g~~v~~~~~~~~~~~ISST~IR~~l~~G~ 157 (288)
T TIGR00083 80 FANLSALQFIDQLIVKHLHVKFLVVGDDFRFGHD--RQGDFLLLQLFGNTTIFCVIVKQLFCQDIRISSSAIRQALKNGD 157 (288)
T ss_pred HHcCCHHHHHHHHHHhccCCcEEEECCCccCCCC--CCCCHHHHHHhccccCcEEEEeccccCCCeECHHHHHHHHHcCC
Confidence 13344543 468999999999875521 12222222 2233432222 2 225699999988775544
No 117
>PF06574 FAD_syn: FAD synthetase; InterPro: IPR015864 Riboflavin is converted into catalytically active cofactors (FAD and FMN) by the actions of riboflavin kinase (2.7.1.26 from EC), which converts it into FMN, and FAD synthetase (2.7.7.2 from EC), which adenylates FMN to FAD. Eukaryotes usually have two separate enzymes, while most prokaryotes have a single bifunctional protein that can carry out both catalyses, although exceptions occur in both cases. While eukaryotic monofunctional riboflavin kinase is orthologous to the bifunctional prokaryotic enzyme [], the monofunctional FAD synthetase differs from its prokaryotic counterpart, and is instead related to the PAPS-reductase family []. The bacterial FAD synthetase that is part of the bifunctional enzyme has remote similarity to nucleotidyl transferases and, hence, it may be involved in the adenylylation reaction of FAD synthetases []. This entry represents prokaryotic-type FAD synthetase, which occurs primarily as part of a bifunctional enzyme.; GO: 0003919 FMN adenylyltransferase activity, 0009231 riboflavin biosynthetic process; PDB: 2X0K_B 3OP1_B 1T6Z_A 2I1L_A 1T6Y_B 1T6X_B 1S4M_A 1MRZ_A.
Probab=98.18 E-value=7.7e-06 Score=74.17 Aligned_cols=100 Identities=25% Similarity=0.227 Sum_probs=63.4
Q ss_pred CCeEEEEcCeeccCCHHHHHHHHHHHhcC---CEEEEEEecChhhhhc---cCCCCCCCCHHHHHHHHHhhcccCeeEEc
Q 014503 255 NARVVYIDGAFDLFHAGHVEILKKARQLG---DFLLVGIYTDQIVSEH---RGSYHPIMHLHERSLSVLACRYVDEVIIG 328 (423)
Q Consensus 255 ~~~iv~~~G~FDl~H~GHi~~L~~A~~~g---d~LiVgv~~D~~v~~~---Kg~~~pi~~~~ER~~~v~~~~~Vd~Vvi~ 328 (423)
.++.+++-|.||-+|.||-.+|++|.+.+ +...+.++=|..-... ......+++.+||...+.++. ||.+++-
T Consensus 4 ~~~~~v~iG~FDGvH~GHq~Li~~~~~~a~~~~~~~~v~tF~~~P~~~~~~~~~~~~l~s~~ek~~~l~~~G-vd~~~~~ 82 (157)
T PF06574_consen 4 NKKSVVAIGNFDGVHLGHQKLIKKAVEIAKEKGLKSVVLTFDPHPKEVLNPDKPPKLLTSLEEKLELLESLG-VDYVIVI 82 (157)
T ss_dssp -S-EEEEES--TT--HHHHHHHHHHHHHHHHCT-EEEEEEESS-CHHHHSCTCCGGBSS-HHHHHHHHHHTT-ESEEEEE
T ss_pred CCCcEEEEeCCCCccHHHHHHHHHHhhhhhhcccceEEEEcccCHHHHhcCCCcccCCCCHHHHHHHHHHcC-CCEEEEe
Confidence 46789999999999999999999988876 4344444444321111 122356999999999999985 9988774
Q ss_pred CC-----CCchHHHHh-----hcCccEEEecCCcCCC
Q 014503 329 AP-----WEVTKDMIT-----TFNICLVVHGTVSETN 355 (423)
Q Consensus 329 ~p-----~~~~~~~i~-----~~~~d~vv~G~d~~~~ 355 (423)
+. ...++++++ ++++..+|.|.|+.-.
T Consensus 83 ~F~~~~~~ls~~~Fi~~iL~~~l~~~~ivvG~DfrFG 119 (157)
T PF06574_consen 83 PFTEEFANLSPEDFIEKILKEKLNVKHIVVGEDFRFG 119 (157)
T ss_dssp -CCCHHCCS-HHHHHHHHCCCHCTEEEEEEETT-EES
T ss_pred cchHHHHcCCHHHHHHHHHHhcCCccEEEEccCccCC
Confidence 32 223556665 4689999999998655
No 118
>KOG3351 consensus Predicted nucleotidyltransferase [General function prediction only]
Probab=98.14 E-value=3e-06 Score=80.64 Aligned_cols=84 Identities=32% Similarity=0.454 Sum_probs=62.9
Q ss_pred CCCCCCCeEEEEcCeeccCCHHHHHHHHHHHhcC-CEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHh----hc---c
Q 014503 250 KGPGPNARVVYIDGAFDLFHAGHVEILKKARQLG-DFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA----CR---Y 321 (423)
Q Consensus 250 ~~~~~~~~iv~~~G~FDl~H~GHi~~L~~A~~~g-d~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~----~~---~ 321 (423)
.++..+..++.++|+||=+|.||-=+|..|..++ |.|||||++|+.+.+.+-+ .-|-|.+||..-|.. ++ .
T Consensus 136 ~~~a~~~~~~alGGTFDrLH~gHKvLLs~aa~la~~~lVvGV~d~elL~kK~~~-Eliepie~R~~~V~~Fl~~IKp~l~ 214 (293)
T KOG3351|consen 136 SGPANKFMVVALGGTFDRLHDGHKVLLSVAAELASDRLVVGVTDDELLKKKVLK-ELIEPIEERKEHVSNFLKSIKPDLN 214 (293)
T ss_pred ccchhcceeEEeccchhhhccchHHHHHHHHHHhhceEEEEecChHHHHHhHHH-HHhhhHHHHHHHHHHHHHhcCCCce
Confidence 3444556789999999999999999999999998 8999999999987654322 357789999966654 33 2
Q ss_pred cCeeEEcCCCCch
Q 014503 322 VDEVIIGAPWEVT 334 (423)
Q Consensus 322 Vd~Vvi~~p~~~~ 334 (423)
|+.|=+-+|++++
T Consensus 215 ~~~vpi~Dp~GPt 227 (293)
T KOG3351|consen 215 VRVVPIHDPFGPT 227 (293)
T ss_pred EEEEecccCCCCC
Confidence 4445555666543
No 119
>cd09286 NMNAT_Eukarya Nicotinamide/nicotinate mononucleotide adenylyltransferase, Eukaryotic. Nicotinamide/nicotinate mononucleotide (NMN/ NaMN)adenylyltransferase (NMNAT). NMNAT represents the primary bacterial and eukaryotic adenylyltransferases for nicotinamide-nucleotide and for the deamido form, nicotinate nucleotide. It is an indispensable enzyme in the biosynthesis of NAD(+) and NADP(+). Nicotinamide-nucleotide adenylyltransferase synthesizes NAD via the salvage pathway, while nicotinate-nucleotide adenylyltransferase synthesizes the immediate precursor of NAD via the de novo pathway. Human NMNAT displays unique dual substrate specificity toward both NMN and NaMN, and can participate in both de novo and salvage pathways of NAD synthesis. This subfamily consists strictly of eukaryotic members and includes secondary structural elements not found in all NMNATs.
Probab=98.11 E-value=2.2e-05 Score=75.33 Aligned_cols=69 Identities=16% Similarity=0.114 Sum_probs=45.8
Q ss_pred EEEEcCeeccCCHHHHHHHHHHHhcCC--E--EEEEEe-cChhhhhccCCCCCCCCHHHHHHHHH-hhcccCeeEEcC
Q 014503 258 VVYIDGAFDLFHAGHVEILKKARQLGD--F--LLVGIY-TDQIVSEHRGSYHPIMHLHERSLSVL-ACRYVDEVIIGA 329 (423)
Q Consensus 258 iv~~~G~FDl~H~GHi~~L~~A~~~gd--~--LiVgv~-~D~~v~~~Kg~~~pi~~~~ER~~~v~-~~~~Vd~Vvi~~ 329 (423)
+.+++|+|||+|.||+.++++|.+..+ . .+|.+. .=...+..| .+..+.++|+.|++ ++...+.+.+.+
T Consensus 2 ~~~~gGSFdPiH~gHl~ia~~a~~~l~~~~~~~~v~~~~~P~~~~~~k---~~~~~~~~Rl~Ml~lai~~~~~~~v~~ 76 (225)
T cd09286 2 VLLACGSFNPITNMHLRMFELARDHLHETGRYEVVGGIISPVNDAYGK---KGLASAKHRVAMCRLAVQSSDWIRVDD 76 (225)
T ss_pred EEEeCcCcCCCcHHHHHHHHHHHHHHHhhcCceeEEEEEEeeccCCCC---CCCCCHHHHHHHHHHHHccCCCEEEEe
Confidence 568899999999999999999987653 2 222211 100011122 46779999998885 677666666643
No 120
>COG0196 RibF FAD synthase [Coenzyme metabolism]
Probab=97.97 E-value=0.00011 Score=73.44 Aligned_cols=139 Identities=19% Similarity=0.214 Sum_probs=88.7
Q ss_pred CeEEEEcCeeccCCHHHHHHHHHHHhcCC--EE-EEEEecChhhhhccCC---CCCCCCHHHHHHHHHhhcccCeeEEcC
Q 014503 256 ARVVYIDGAFDLFHAGHVEILKKARQLGD--FL-LVGIYTDQIVSEHRGS---YHPIMHLHERSLSVLACRYVDEVIIGA 329 (423)
Q Consensus 256 ~~iv~~~G~FDl~H~GHi~~L~~A~~~gd--~L-iVgv~~D~~v~~~Kg~---~~pi~~~~ER~~~v~~~~~Vd~Vvi~~ 329 (423)
...+++-|.||=+|.||-.+|++|++.+. .+ .+.++-++--.....+ ..-++++++|+..+..+. ||.+++.+
T Consensus 15 ~~~~l~IG~FDGvHlGHq~ll~~a~~~a~~~~~~~~VitF~p~P~~~~~~~~~~~~Lt~~~~k~~~l~~~g-vd~~~v~~ 93 (304)
T COG0196 15 RGCVLTIGNFDGVHLGHQKLLAQALEAAEKRGLPVVVITFEPHPRELLKPDKPPTRLTPLREKIRLLAGYG-VDALVVLD 93 (304)
T ss_pred CCcEEEEEcCCccchhHHHHHHHHHHHHHHhCCceEEEEecCCCHHHcCCCCCccccCCHHHHHHHHHhcC-CcEEEEEe
Confidence 46799999999999999999999886542 12 4444444333333221 112899999999999997 99888743
Q ss_pred CC-----CchHHHHh----hcCccEEEecCCcCCCCCCCCCCChHHHHHhCC---e-EEEeCCC----CCCCHHHHHHHH
Q 014503 330 PW-----EVTKDMIT----TFNICLVVHGTVSETNTPLTGQSDPYEVAKSMG---I-FQLLESP----KSITTTSVAQRI 392 (423)
Q Consensus 330 p~-----~~~~~~i~----~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G---~-~~~i~~~----~~~Stt~Ii~RI 392 (423)
.. -...++++ ++++..+|-|.|+.-.. ....-....+..| . ...++.. ..+|||.|.+-+
T Consensus 94 F~~~fa~ls~~~Fv~~lv~~l~~k~ivvG~DF~FGk---~~~g~~~~L~~~~~~gf~v~~v~~~~~~~~~iSSt~IR~~L 170 (304)
T COG0196 94 FDLEFANLSAEEFVELLVEKLNVKHIVVGFDFRFGK---GRQGNAELLRELGQKGFEVTIVPKINEEGIRISSTAIRQAL 170 (304)
T ss_pred CCHhHhhCCHHHHHHHHHhccCCcEEEEecccccCC---CCCCCHHHHHHhccCCceEEEeccEecCCcEEchHHHHHHH
Confidence 21 12344554 88999999999986542 1211123333333 2 3344432 248999998877
Q ss_pred HhchHh
Q 014503 393 IANHEA 398 (423)
Q Consensus 393 ~~~~~~ 398 (423)
.+..-.
T Consensus 171 ~~gdl~ 176 (304)
T COG0196 171 REGDLE 176 (304)
T ss_pred hcCCHH
Confidence 554433
No 121
>PF08218 Citrate_ly_lig: Citrate lyase ligase C-terminal domain; InterPro: IPR013166 [Citrate (pro-3S)-lyase] ligase (6.2.1.22 from EC), also known as citrate lyase ligase, is responsible for acetylation of the prosthetic group (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase. It converts the inactive thiol form of the enzyme to the active form. In Clostridium sphenoides, citrate lyase ligase actively degrades citrate. In Clostridium sporosphaeroides and Lactococcus lactis, however, the enzyme is under stringent regulatory control. The enzyme's activity in anaerobic bacteria is modulated by phosphorylation and dephosphorylation []. The proteins in this entry represent the C-terminal domain of citrate lyase ligase.; GO: 0008771 [citrate (pro-3S)-lyase] ligase activity
Probab=97.93 E-value=9.1e-05 Score=67.88 Aligned_cols=124 Identities=20% Similarity=0.211 Sum_probs=83.6
Q ss_pred ecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhc-Cccc---------cEEEecCCccc
Q 014503 71 DGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKWV---------DEVIANAPYAI 140 (423)
Q Consensus 71 ~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~-~~~V---------D~vi~~~p~~~ 140 (423)
.-+-+|++.||+-|+++|.+.+|.|.|-|.+.+ .-+++.++|++|++. ++.. |++|..+.|.-
T Consensus 5 VMNaNPFT~GH~yLiE~Aa~~~d~l~vFVV~eD-------~S~Fpf~~R~~LVk~G~~~L~NV~V~~~g~YiIS~aTFPs 77 (182)
T PF08218_consen 5 VMNANPFTLGHRYLIEQAAKECDWLHVFVVSED-------RSLFPFADRYELVKEGTADLPNVTVHPGGDYIISSATFPS 77 (182)
T ss_pred EEcCCCCccHHHHHHHHHHHhCCEEEEEEEccc-------cCcCCHHHHHHHHHHHhCcCCCEEEEcCCCeeeecccChh
Confidence 346789999999999999999999887777654 468999999999985 2222 34444333210
Q ss_pred c---H--------------HHHHHHHhhcCccEEEEcCCCCCCCCCCcHHH-----HHHhC-CcEEEeccCC----CCCH
Q 014503 141 T---E--------------QFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYA-----LAKKV-GRYKQIKRTE----GVSS 193 (423)
Q Consensus 141 ~---~--------------efl~~ll~~~~~d~VV~G~D~~~g~~g~~~~~-----~lk~~-g~~~~v~r~~----~iSS 193 (423)
. + -|.+.+...+++..-.+|+.+..-.. ..|+ .|... -++.+++|.+ .||-
T Consensus 78 YFlK~~~~~~~~~~~lD~~iF~~~IAp~L~It~RfVG~EP~~~vT--~~YN~~M~~~Lp~~gi~v~ei~R~~~~g~~ISA 155 (182)
T PF08218_consen 78 YFLKDEDDVIKAQAELDATIFKKYIAPALGITKRFVGEEPFSPVT--RIYNEAMKEILPPYGIEVVEIPRKEINGEPISA 155 (182)
T ss_pred hhccchhHHHHHHHHHHHHHHHHHhhHhcCcccceeCCCCCCHHH--HHHHHHHHHhccccCCEEEEEecccCCCcEEcH
Confidence 0 0 23333445688999999988643221 2232 33334 3688999953 3999
Q ss_pred HHHHHHHHhc
Q 014503 194 TDIVGRILSS 203 (423)
Q Consensus 194 T~Ir~rI~~~ 203 (423)
|..|+.|.++
T Consensus 156 S~VR~~l~~~ 165 (182)
T PF08218_consen 156 SRVRKLLKEG 165 (182)
T ss_pred HHHHHHHHcC
Confidence 9999999865
No 122
>TIGR00018 panC pantoate--beta-alanine ligase. This family is pantoate--beta-alanine ligase, the last enzyme of pantothenate biosynthesis.
Probab=97.82 E-value=4e-05 Score=75.69 Aligned_cols=64 Identities=30% Similarity=0.301 Sum_probs=53.6
Q ss_pred EEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhcc-CC--CCCCcHHHHHHHHhcCccccEEEe
Q 014503 67 RVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIAN-KG--PPVLSMEERLALVSGLKWVDEVIA 134 (423)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~-K~--~pi~t~eER~~~l~~~~~VD~vi~ 134 (423)
-|.+.|+ +|.||+.||++|++.++.++|.+..++.-... .. +.+.+.++|.++++.+ +||.++.
T Consensus 26 ~VpTmG~---LH~GH~~LI~~a~~~a~~vVvTffvnP~qf~~~ed~~~yp~tle~d~~ll~~~-GVD~vf~ 92 (282)
T TIGR00018 26 FVPTMGN---LHDGHMSLIDRAVAENDVVVVSIFVNPMQFGPNEDLEAYPRTLEEDCALLEKL-GVDVVFA 92 (282)
T ss_pred EEECCCc---ccHHHHHHHHHHHHhCCeEEEEecCChHHhCCccccccCCCCHHHHHHHHHHc-CCCEEEC
Confidence 4678999 99999999999999999888888888754222 21 4688999999999998 9999987
No 123
>PRK13670 hypothetical protein; Provisional
Probab=97.75 E-value=6.4e-05 Score=77.64 Aligned_cols=85 Identities=20% Similarity=0.313 Sum_probs=63.2
Q ss_pred CeeccCCHHHHHHHHHHHhcCC-EEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhhcccCeeEEcCCC---CchHH--
Q 014503 263 GAFDLFHAGHVEILKKARQLGD-FLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPW---EVTKD-- 336 (423)
Q Consensus 263 G~FDl~H~GHi~~L~~A~~~gd-~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~~~Vd~Vvi~~p~---~~~~~-- 336 (423)
=-||+||.||..+|++|++.+. .++++|-+-..+.+ |. .++++..+|+.+++.+. ||.|+.-+.. ..+.+
T Consensus 8 aEfdg~H~GH~~~i~~a~~~a~~~~~~~Vmp~~f~qr--g~-p~i~~~~~R~~~a~~~G-vD~vielpf~~a~~sae~F~ 83 (388)
T PRK13670 8 VEYNPFHNGHLYHLNQAKKLTNADVTIAVMSGNFVQR--GE-PAIVDKWTRAKMALENG-VDLVVELPFLYSVQSADFFA 83 (388)
T ss_pred eeeCCcCHHHHHHHHHHHHHHhCCCcEEEecHHHhCC--CC-CCCCCHHHHHHHHHHcC-CCEEEEeCCchHhCCHHHHH
Confidence 3599999999999999997542 35555667766654 54 35999999999999985 9998885431 12223
Q ss_pred -----HHhhcCccEEEecCC
Q 014503 337 -----MITTFNICLVVHGTV 351 (423)
Q Consensus 337 -----~i~~~~~d~vv~G~d 351 (423)
++..++++.+|.|.|
T Consensus 84 ~~aV~iL~~l~v~~lv~G~e 103 (388)
T PRK13670 84 EGAVSILDALGVDSLVFGSE 103 (388)
T ss_pred HhHHHHHHHcCCCEEEEcCC
Confidence 345588999999988
No 124
>PLN02660 pantoate--beta-alanine ligase
Probab=97.74 E-value=6.7e-05 Score=74.07 Aligned_cols=64 Identities=27% Similarity=0.309 Sum_probs=53.8
Q ss_pred EEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhcc-CC--CCCCcHHHHHHHHhcCccccEEEe
Q 014503 67 RVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIAN-KG--PPVLSMEERLALVSGLKWVDEVIA 134 (423)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~-K~--~pi~t~eER~~~l~~~~~VD~vi~ 134 (423)
-|.+.|+ +|.||+.||++|++.++.++|.+..+|.-... .. +.+.|.++|.++++.+ +||.++.
T Consensus 25 fVpTmG~---LH~GH~~LI~~a~~~a~~vVvTffvnP~qf~~~ed~~~yp~tle~d~~ll~~~-GVD~vf~ 91 (284)
T PLN02660 25 LVPTMGY---LHEGHLSLVRAARARADVVVVSIYVNPGQFAPGEDLDTYPRDFDGDLRKLAAL-GVDAVFN 91 (284)
T ss_pred EEEcCch---hhHHHHHHHHHHHHhCCEEEEEEeCChHHcCCccccccCCCCHHHHHHHHHHc-CCCEEEC
Confidence 5788898 99999999999999999888888888764221 22 5688999999999997 8999886
No 125
>PF05636 HIGH_NTase1: HIGH Nucleotidyl Transferase; InterPro: IPR008513 This family consists of several bacterial proteins of unknown function.; PDB: 3GMI_A.
Probab=97.55 E-value=0.00012 Score=75.59 Aligned_cols=90 Identities=27% Similarity=0.431 Sum_probs=38.0
Q ss_pred EEEecccCcCcHHHHHHHHHHHHhc--CeeEEEEecchhhhccCC-CCCCcHHHHHHHHhcCccccEEEecCCcccc---
Q 014503 68 VYMDGCFDLMHYGHANALRQAKALG--DELVVGVVSDEEIIANKG-PPVLSMEERLALVSGLKWVDEVIANAPYAIT--- 141 (423)
Q Consensus 68 V~~~G~FD~lH~GH~~lL~qA~~~~--d~LiVgV~sd~~i~~~K~-~pi~t~eER~~~l~~~~~VD~vi~~~p~~~~--- 141 (423)
+=++-=|+|+|.||+-.|+++++.. |. +|+|-|-..+ + .| +.+++--.|.++.-.+ ++|.|++ .|+.+.
T Consensus 4 ~GIIaEYNPFHnGH~y~i~~~k~~~~ad~-ii~vMSGnFv-Q-RGEPAi~dKw~RA~~AL~~-GaDLViE-LP~~~a~qs 78 (388)
T PF05636_consen 4 VGIIAEYNPFHNGHLYQIEQAKKITGADV-IIAVMSGNFV-Q-RGEPAIIDKWTRAEMALKN-GADLVIE-LPVVYALQS 78 (388)
T ss_dssp ---E---TT--HHHHHHHHHHH---TSSE-EEEEE--TTS-B-TSSB-SS-HHHHHHHHHHH-T-SEEEE----G-----
T ss_pred CCeEEeECCccHHHHHHHHHHhccCCCCE-EEEEECCCcc-c-CCCeeeCCHHHHHHHHHHc-CCCEEEE-CCCcccccc
Confidence 3344469999999999999999874 65 4455555433 2 44 7799999999998776 9999998 666544
Q ss_pred -HHHHH---HHHhhcCccEEEEcCC
Q 014503 142 -EQFMN---RLFNEHKIDYIIHGDD 162 (423)
Q Consensus 142 -~efl~---~ll~~~~~d~VV~G~D 162 (423)
+.|-. .++..++||+++.|..
T Consensus 79 A~~FA~gaV~lL~~lgvd~l~FGsE 103 (388)
T PF05636_consen 79 AEYFARGAVSLLNALGVDYLSFGSE 103 (388)
T ss_dssp -------------------------
T ss_pred ccccccccccccccccccccccccc
Confidence 24432 2677889999998864
No 126
>COG1323 Predicted nucleotidyltransferase [General function prediction only]
Probab=97.36 E-value=0.00048 Score=70.00 Aligned_cols=88 Identities=22% Similarity=0.234 Sum_probs=63.1
Q ss_pred ecccCcCcHHHHHHHHHHHHhc--CeeEEEEecchhhhccCCCCCCcHHHHHHHHhcCccccEEEecCCccccH---HH-
Q 014503 71 DGCFDLMHYGHANALRQAKALG--DELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITE---QF- 144 (423)
Q Consensus 71 ~G~FD~lH~GH~~lL~qA~~~~--d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~~VD~vi~~~p~~~~~---ef- 144 (423)
+--||++|.||+.+|++|+++. |..++++..| .. ++..+++.+..+|.++.-+. ++|.||+ .|+.++- ++
T Consensus 7 i~eyNPfHnGH~y~i~~Ar~~~~~d~~i~~msgd-f~-qRgepai~~k~~r~~~aL~~-g~D~VIe-lP~~~s~q~a~~f 82 (358)
T COG1323 7 IAEYNPFHNGHQYHINKAREEFKGDEIIAVMSGD-FT-QRGEPAIGHKWERKKMALEG-GADLVIE-LPLERSGQGAPYF 82 (358)
T ss_pred eeecCcccccHHHHHHHHHHhccCCceEEeeecc-hh-hcCCCccccHHHHHhhhhhc-CceEEEE-cceEEecCCCchh
Confidence 3359999999999999999853 5555555444 22 23337899999999999886 8999998 6765541 22
Q ss_pred HH---HHHhhcCccEEEEcCC
Q 014503 145 MN---RLFNEHKIDYIIHGDD 162 (423)
Q Consensus 145 l~---~ll~~~~~d~VV~G~D 162 (423)
.. .++..+++|.|+.|..
T Consensus 83 a~~av~il~~l~~~~i~fgse 103 (358)
T COG1323 83 ATRAVRILNALGGDDIAFGSP 103 (358)
T ss_pred hHHHHHHHHhcCCCeEEEeCC
Confidence 21 2556788888887743
No 127
>COG3053 CitC Citrate lyase synthetase [Energy production and conversion]
Probab=97.34 E-value=0.0049 Score=60.68 Aligned_cols=136 Identities=18% Similarity=0.160 Sum_probs=91.3
Q ss_pred CCCCCeEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhc----------Ccccc
Q 014503 61 GKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG----------LKWVD 130 (423)
Q Consensus 61 ~~~~~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~----------~~~VD 130 (423)
+....++.-+.-+-+|+-.||+-|++||.+.||.|.+-+.+++ ...+++++|.++++. .++-|
T Consensus 141 r~~gkkIgaIVMNANPFTLGH~YLVEqAaaqcDwlHLFvV~eD-------~S~f~y~~R~~Lv~~G~~~l~Nvt~Hsgsd 213 (352)
T COG3053 141 RHPGKKIGAIVMNANPFTLGHRYLVEQAAAQCDWLHLFVVKED-------SSLFPYEDRLDLVKKGTADLPNVTVHSGSD 213 (352)
T ss_pred ccCCCeeEEEEEeCCCccchhHHHHHHHHhhCCEEEEEEEecc-------cccCCHHHHHHHHHHhhccCCceEEecCCC
Confidence 3445678888889999999999999999999998866665544 357899999999974 23456
Q ss_pred EEEecCCcccc---H--------------HHHHHHHhhcCccEEEEcCCCCCCCCC---CcHHHHHHhCC------cEEE
Q 014503 131 EVIANAPYAIT---E--------------QFMNRLFNEHKIDYIIHGDDPCLLPDG---TDAYALAKKVG------RYKQ 184 (423)
Q Consensus 131 ~vi~~~p~~~~---~--------------efl~~ll~~~~~d~VV~G~D~~~g~~g---~~~~~~lk~~g------~~~~ 184 (423)
++|..+.|.-. + -|-+.+...+++..=.+|..+-.-... .....+|.+.+ .+++
T Consensus 214 YiISrATFP~YFiKeq~vv~~s~t~iDl~iFr~~iA~aLgIThRfVG~EP~c~vT~~YNq~M~~~L~~~~~~~p~I~vve 293 (352)
T COG3053 214 YIISRATFPAYFIKEQSVVNDSQTEIDLKIFRKYIAPALGITHRFVGTEPFCRVTAIYNQQMRYWLEDPTISAPPIEVVE 293 (352)
T ss_pred eEEEecccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhCcceeeecCCCCcHHHHHHHHHHHHHHhccCCCCCceEEEE
Confidence 77765554211 0 122224456788888889875332111 11123444433 3677
Q ss_pred eccC----CCCCHHHHHHHHHhc
Q 014503 185 IKRT----EGVSSTDIVGRILSS 203 (423)
Q Consensus 185 v~r~----~~iSST~Ir~rI~~~ 203 (423)
++|. ..||.|..|+.+.+.
T Consensus 294 i~Rk~~~~~~ISAS~VR~~l~~~ 316 (352)
T COG3053 294 IERKKYQEMPISASRVRQLLAKN 316 (352)
T ss_pred eehhhhcCCcccHHHHHHHHHhC
Confidence 8884 359999999998753
No 128
>PLN02945 nicotinamide-nucleotide adenylyltransferase/nicotinate-nucleotide adenylyltransferase
Probab=97.32 E-value=0.00063 Score=65.66 Aligned_cols=71 Identities=17% Similarity=0.279 Sum_probs=45.4
Q ss_pred CCCeEEEEcCeeccCCHHHHHHHHHHHhcC--C-EEEEEEecChh-hhhccCCCCCCCCHHHHHHHHH-hhcccCeeEE
Q 014503 254 PNARVVYIDGAFDLFHAGHVEILKKARQLG--D-FLLVGIYTDQI-VSEHRGSYHPIMHLHERSLSVL-ACRYVDEVII 327 (423)
Q Consensus 254 ~~~~iv~~~G~FDl~H~GHi~~L~~A~~~g--d-~LiVgv~~D~~-v~~~Kg~~~pi~~~~ER~~~v~-~~~~Vd~Vvi 327 (423)
....+.+.+|+|||.|.||+.+.+.|++.. | ..+|++.--.. ....| ....+.++|+.|++ ++..-..+.+
T Consensus 20 ~~~~v~i~GGSFdP~H~gHl~ia~~a~~~l~~d~~~~v~~~~~P~~~~~~k---~~~~~~~~Rl~Ml~lai~~~~~~~V 95 (236)
T PLN02945 20 RTRVVLVATGSFNPPTYMHLRMFELARDALMSEGYHVLGGYMSPVNDAYKK---KGLASAEHRIQMCQLACEDSDFIMV 95 (236)
T ss_pred CceEEEEEcCCCCCCcHHHHHHHHHHHHHHhhcCcEEEEEEECCCCccccc---CCCCCHHHHHHHHHHHhcCCCCeEe
Confidence 345678889999999999999998888643 3 23443321111 11123 25679999998885 6665444444
No 129
>COG1323 Predicted nucleotidyltransferase [General function prediction only]
Probab=97.18 E-value=0.0009 Score=68.06 Aligned_cols=83 Identities=24% Similarity=0.304 Sum_probs=60.9
Q ss_pred eeccCCHHHHHHHHHHHhc--CCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhhcccCeeEEcCC--------C--
Q 014503 264 AFDLFHAGHVEILKKARQL--GDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAP--------W-- 331 (423)
Q Consensus 264 ~FDl~H~GHi~~L~~A~~~--gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~~~Vd~Vvi~~p--------~-- 331 (423)
-|||||.||..+|++|+++ +|..++++..| .+++ |. -++++..||..+.+++. +|.||..+- +
T Consensus 9 eyNPfHnGH~y~i~~Ar~~~~~d~~i~~msgd-f~qR--ge-pai~~k~~r~~~aL~~g-~D~VIelP~~~s~q~a~~fa 83 (358)
T COG1323 9 EYNPFHNGHQYHINKAREEFKGDEIIAVMSGD-FTQR--GE-PAIGHKWERKKMALEGG-ADLVIELPLERSGQGAPYFA 83 (358)
T ss_pred ecCcccccHHHHHHHHHHhccCCceEEeeecc-hhhc--CC-CccccHHHHHhhhhhcC-ceEEEEcceEEecCCCchhh
Confidence 4999999999999999973 46555555555 5543 54 58999999999999885 888887532 1
Q ss_pred CchHHHHhhcCccEEEecCC
Q 014503 332 EVTKDMITTFNICLVVHGTV 351 (423)
Q Consensus 332 ~~~~~~i~~~~~d~vv~G~d 351 (423)
.-....+..+++|.++.|+.
T Consensus 84 ~~av~il~~l~~~~i~fgse 103 (358)
T COG1323 84 TRAVRILNALGGDDIAFGSP 103 (358)
T ss_pred HHHHHHHHhcCCCeEEEeCC
Confidence 01233567778888888875
No 130
>TIGR00339 sopT ATP sulphurylase. Members of this family also include the dissimilatory sulfate adenylyltransferase (sat) of the sulfate reducer Archaeoglobus fulgidus.
Probab=97.03 E-value=0.0051 Score=63.53 Aligned_cols=94 Identities=19% Similarity=0.169 Sum_probs=64.2
Q ss_pred CeEEEEecccCcCcHHHHHHHHHHHHh--cCeeEEEEecchhhhccCCCCCCcHHHHHHHHhcCc-cc---cEE-EecCC
Q 014503 65 RVRVYMDGCFDLMHYGHANALRQAKAL--GDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLK-WV---DEV-IANAP 137 (423)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~--~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~-~V---D~v-i~~~p 137 (423)
-++|++.=+||++|.||..+++.|.+. +|.|++-+.-- ..| +-.++.+-|+++++.+. .. +.+ +.-.|
T Consensus 183 w~~Vvafqt~nPiHr~H~~l~~~a~e~l~~d~lll~P~~g----~~k-~~~~~~~~R~~~~~~~~~~~~~~~~~~l~~~~ 257 (383)
T TIGR00339 183 WDTVVAFQTRNPMHRAHEELTKRAARSLPNAGVLVHPLVG----LTK-PGDIPAEVRMRAYEVLKEGYPNPERVMLTFLP 257 (383)
T ss_pred CCeEEEeccCCCCchHHHHHHHHHHHHcCCCeEEEEeCCC----CCC-CCCCCHHHHHHHHHHHHhhCCCCCceEEEecc
Confidence 357888999999999999999999997 67666655443 223 36788999999998631 11 112 22233
Q ss_pred cccc----HHHHHH--HHhhcCccEEEEcCCC
Q 014503 138 YAIT----EQFMNR--LFNEHKIDYIIHGDDP 163 (423)
Q Consensus 138 ~~~~----~efl~~--ll~~~~~d~VV~G~D~ 163 (423)
+.+. .+.+.. +.++|+|.++++|.|.
T Consensus 258 ~em~~agpreall~Aiir~nyG~th~IiG~Dh 289 (383)
T TIGR00339 258 LAMRYAGPREAIWHAIIRKNYGATHFIVGRDH 289 (383)
T ss_pred hHhhcCCcHHHHHHHHHHHHCCCCEEEECCCC
Confidence 3222 244544 4467999999999885
No 131
>PF05636 HIGH_NTase1: HIGH Nucleotidyl Transferase; InterPro: IPR008513 This family consists of several bacterial proteins of unknown function.; PDB: 3GMI_A.
Probab=96.95 E-value=0.0013 Score=67.94 Aligned_cols=85 Identities=19% Similarity=0.370 Sum_probs=40.1
Q ss_pred eeccCCHHHHHHHHHHHhc-CCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhhcccCeeEEcCC-CC---------
Q 014503 264 AFDLFHAGHVEILKKARQL-GDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAP-WE--------- 332 (423)
Q Consensus 264 ~FDl~H~GHi~~L~~A~~~-gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~~~Vd~Vvi~~p-~~--------- 332 (423)
-|.|||.||..+|++||+. +.-.||+|-|-..|.| |. --+++--.|+.+.+.+. ||-|+--+- +.
T Consensus 9 EYNPFHnGH~y~i~~~k~~~~ad~ii~vMSGnFvQR--GE-PAi~dKw~RA~~AL~~G-aDLViELP~~~a~qsA~~FA~ 84 (388)
T PF05636_consen 9 EYNPFHNGHLYQIEQAKKITGADVIIAVMSGNFVQR--GE-PAIIDKWTRAEMALKNG-ADLVIELPVVYALQSAEYFAR 84 (388)
T ss_dssp --TT--HHHHHHHHHHH---TSSEEEEEE--TTSBT--SS-B-SS-HHHHHHHHHHHT--SEEEE---G-----------
T ss_pred eECCccHHHHHHHHHHhccCCCCEEEEEECCCcccC--CC-eeeCCHHHHHHHHHHcC-CCEEEECCCcccccccccccc
Confidence 4899999999999999965 3335667777778764 65 57999999999988885 898876321 11
Q ss_pred chHHHHhhcCccEEEecCCc
Q 014503 333 VTKDMITTFNICLVVHGTVS 352 (423)
Q Consensus 333 ~~~~~i~~~~~d~vv~G~d~ 352 (423)
-...++..+++|.++-|++.
T Consensus 85 gaV~lL~~lgvd~l~FGsE~ 104 (388)
T PF05636_consen 85 GAVSLLNALGVDYLSFGSES 104 (388)
T ss_dssp --------------------
T ss_pred cccccccccccccccccccc
Confidence 12346888899999999875
No 132
>PF08218 Citrate_ly_lig: Citrate lyase ligase C-terminal domain; InterPro: IPR013166 [Citrate (pro-3S)-lyase] ligase (6.2.1.22 from EC), also known as citrate lyase ligase, is responsible for acetylation of the prosthetic group (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase. It converts the inactive thiol form of the enzyme to the active form. In Clostridium sphenoides, citrate lyase ligase actively degrades citrate. In Clostridium sporosphaeroides and Lactococcus lactis, however, the enzyme is under stringent regulatory control. The enzyme's activity in anaerobic bacteria is modulated by phosphorylation and dephosphorylation []. The proteins in this entry represent the C-terminal domain of citrate lyase ligase.; GO: 0008771 [citrate (pro-3S)-lyase] ligase activity
Probab=96.81 E-value=0.0036 Score=57.57 Aligned_cols=56 Identities=18% Similarity=0.262 Sum_probs=46.9
Q ss_pred eeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHH-hhcccCeeEEc
Q 014503 264 AFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVL-ACRYVDEVIIG 328 (423)
Q Consensus 264 ~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~-~~~~Vd~Vvi~ 328 (423)
.-.||+.||..++++|++.||.|.|=|.+++ +.+++..+|..+|+ .++..++|++-
T Consensus 7 NaNPFT~GH~yLiE~Aa~~~d~l~vFVV~eD---------~S~Fpf~~R~~LVk~G~~~L~NV~V~ 63 (182)
T PF08218_consen 7 NANPFTLGHRYLIEQAAKECDWLHVFVVSED---------RSLFPFADRYELVKEGTADLPNVTVH 63 (182)
T ss_pred cCCCCccHHHHHHHHHHHhCCEEEEEEEccc---------cCcCCHHHHHHHHHHHhCcCCCEEEE
Confidence 3579999999999999999999988887653 57899999997775 47788887773
No 133
>TIGR00018 panC pantoate--beta-alanine ligase. This family is pantoate--beta-alanine ligase, the last enzyme of pantothenate biosynthesis.
Probab=96.38 E-value=0.01 Score=58.86 Aligned_cols=71 Identities=20% Similarity=0.237 Sum_probs=52.2
Q ss_pred CCeEEE--EcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhc-cCCCCCCCCHHHHHHHHHhhcccCeeEEcC
Q 014503 255 NARVVY--IDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEH-RGSYHPIMHLHERSLSVLACRYVDEVIIGA 329 (423)
Q Consensus 255 ~~~iv~--~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~-Kg~~~pi~~~~ER~~~v~~~~~Vd~Vvi~~ 329 (423)
+++|++ +-|. +|.||..++++|++.+|.+||.+..+..-... ......+++++++...++++ .||.++..+
T Consensus 21 g~~ig~VpTmG~---LH~GH~~LI~~a~~~a~~vVvTffvnP~qf~~~ed~~~yp~tle~d~~ll~~~-GVD~vf~P~ 94 (282)
T TIGR00018 21 GKTVGFVPTMGN---LHDGHMSLIDRAVAENDVVVVSIFVNPMQFGPNEDLEAYPRTLEEDCALLEKL-GVDVVFAPS 94 (282)
T ss_pred CCeEEEEECCCc---ccHHHHHHHHHHHHhCCeEEEEecCChHHhCCccccccCCCCHHHHHHHHHHc-CCCEEECCC
Confidence 456654 5576 99999999999999999999999876543211 11123467999999998887 488887754
No 134
>COG3053 CitC Citrate lyase synthetase [Energy production and conversion]
Probab=96.29 E-value=0.014 Score=57.63 Aligned_cols=67 Identities=16% Similarity=0.205 Sum_probs=56.1
Q ss_pred CCCCCeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHH-HhhcccCeeEE
Q 014503 252 PGPNARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSV-LACRYVDEVII 327 (423)
Q Consensus 252 ~~~~~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v-~~~~~Vd~Vvi 327 (423)
..++++|+-+-..-.||+.||--++++|.+.||.|.+=|.+++ +..++.++|..++ +..++.++|.+
T Consensus 141 r~~gkkIgaIVMNANPFTLGH~YLVEqAaaqcDwlHLFvV~eD---------~S~f~y~~R~~Lv~~G~~~l~Nvt~ 208 (352)
T COG3053 141 RHPGKKIGAIVMNANPFTLGHRYLVEQAAAQCDWLHLFVVKED---------SSLFPYEDRLDLVKKGTADLPNVTV 208 (352)
T ss_pred ccCCCeeEEEEEeCCCccchhHHHHHHHHhhCCEEEEEEEecc---------cccCCHHHHHHHHHHhhccCCceEE
Confidence 3467899999999999999999999999999999987777653 4689999999555 56777777766
No 135
>PLN02660 pantoate--beta-alanine ligase
Probab=95.94 E-value=0.022 Score=56.41 Aligned_cols=71 Identities=21% Similarity=0.235 Sum_probs=51.4
Q ss_pred CCeEE--EEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhc-cCCCCCCCCHHHHHHHHHhhcccCeeEEcC
Q 014503 255 NARVV--YIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEH-RGSYHPIMHLHERSLSVLACRYVDEVIIGA 329 (423)
Q Consensus 255 ~~~iv--~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~-Kg~~~pi~~~~ER~~~v~~~~~Vd~Vvi~~ 329 (423)
+++|+ .+-|. +|.||..++++|++.+|.++|.+..+..-... ....+..+++++|...+.++. ||.++..+
T Consensus 20 g~~igfVpTmG~---LH~GH~~LI~~a~~~a~~vVvTffvnP~qf~~~ed~~~yp~tle~d~~ll~~~G-VD~vf~P~ 93 (284)
T PLN02660 20 GKRIALVPTMGY---LHEGHLSLVRAARARADVVVVSIYVNPGQFAPGEDLDTYPRDFDGDLRKLAALG-VDAVFNPH 93 (284)
T ss_pred CCeEEEEEcCch---hhHHHHHHHHHHHHhCCEEEEEEeCChHHcCCccccccCCCCHHHHHHHHHHcC-CCEEECCC
Confidence 44554 44466 99999999999999999888888877543111 111235679999999888874 88887654
No 136
>PRK00380 panC pantoate--beta-alanine ligase; Reviewed
Probab=95.83 E-value=0.031 Score=55.42 Aligned_cols=73 Identities=19% Similarity=0.280 Sum_probs=52.8
Q ss_pred CCeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhc-cCCCCCCCCHHHHHHHHHhhcccCeeEEcC
Q 014503 255 NARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEH-RGSYHPIMHLHERSLSVLACRYVDEVIIGA 329 (423)
Q Consensus 255 ~~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~-Kg~~~pi~~~~ER~~~v~~~~~Vd~Vvi~~ 329 (423)
+++++++. +.--+|.||..+|++|++.++.++|.+.....-... ......+.++++|...++++. ||.+++..
T Consensus 21 ~~~i~~v~-tmG~lH~GH~~Li~~a~~~a~~vVvTf~~~P~qf~~~~~~~~~~~t~e~~~~ll~~~G-vD~v~~p~ 94 (281)
T PRK00380 21 GKRIGLVP-TMGALHEGHLSLVREARAEADIVVVSIFVNPLQFGPNEDLDRYPRTLEADLALLEAAG-VDLVFAPS 94 (281)
T ss_pred CCeEEEEE-ccCceeHHHHHHHHHHHHhCCEEEEeCCCCHHHhCCCccccccCCCHHHHHHHHHHcC-CCEEEeCC
Confidence 56676655 444499999999999999999888888766543111 111134678999999988874 89888754
No 137
>cd00560 PanC Pantoate-beta-alanine ligase. PanC Pantoate-beta-alanine ligase, also known as pantothenate synthase, catalyzes the formation of pantothenate from pantoate and alanine. PanC belongs to a large superfamily of nucleotidyltransferases that includes , ATP sulfurylase (ATPS), phosphopantetheine adenylyltransferase (PPAT), and the amino-acyl tRNA synthetases. The enzymes of this family are structurally similar and share a dinucleotide-binding domain.
Probab=95.11 E-value=0.067 Score=52.97 Aligned_cols=92 Identities=17% Similarity=0.237 Sum_probs=59.6
Q ss_pred CCeEEE--EcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhc-cCCCCCCCCHHHHHHHHHhhcccCeeEEcCCC
Q 014503 255 NARVVY--IDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEH-RGSYHPIMHLHERSLSVLACRYVDEVIIGAPW 331 (423)
Q Consensus 255 ~~~iv~--~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~-Kg~~~pi~~~~ER~~~v~~~~~Vd~Vvi~~p~ 331 (423)
+++|++ +-|. +|.||..++++|++.+|.++|.+..+..-... ......+.+++++...++++ .||.++..+..
T Consensus 21 ~~~ig~V~TmG~---LH~GH~~LI~~a~~~a~~vVvtf~~nP~qf~~~ed~~~y~~t~e~d~~ll~~~-GvD~vF~p~~~ 96 (277)
T cd00560 21 GKTIGFVPTMGA---LHEGHLSLVRRARAENDVVVVSIFVNPLQFGPNEDLDRYPRTLEADLALLEEA-GVDLLFAPSVE 96 (277)
T ss_pred CCeEEEEECCCc---ccHHHHHHHHHHHHhCCEEEEEecCChhhcCCcccccccCCCHHHHHHHHHHC-CCCEEECCCHH
Confidence 455544 5566 99999999999999999999999877543111 11113466899999998887 48877432211
Q ss_pred C-chHHHH----hhcCccEEEecC
Q 014503 332 E-VTKDMI----TTFNICLVVHGT 350 (423)
Q Consensus 332 ~-~~~~~i----~~~~~d~vv~G~ 350 (423)
. .+.+++ ...++..++.|.
T Consensus 97 ~m~p~~f~~~~v~~~~~~~il~G~ 120 (277)
T cd00560 97 EMYPEGLFSTFVDVGPLSEVLEGA 120 (277)
T ss_pred HcCCCCCceEEEecCCCceEEecC
Confidence 1 112222 234566677787
No 138
>PF02569 Pantoate_ligase: Pantoate-beta-alanine ligase; InterPro: IPR003721 D-Pantothenate is synthesized via four enzymes from ketoisovalerate, which is an intermediate of branched-chain amino acid synthesis []. Pantoate-beta-alanine ligase, also know as pantothenate synthase, (6.3.2.1 from EC) catalyzes the formation of pantothenate from pantoate and alanine in the pantothenate biosynthesis pathway [].; GO: 0004592 pantoate-beta-alanine ligase activity, 0015940 pantothenate biosynthetic process; PDB: 3MUE_C 1V8F_B 1UFV_A 2X3F_B 1MOP_A 3COY_B 3IOC_A 1N2E_A 3IVX_A 1N2H_A ....
Probab=94.63 E-value=0.079 Score=52.46 Aligned_cols=67 Identities=24% Similarity=0.303 Sum_probs=41.2
Q ss_pred EEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCC---CCCCcHHHHHHHHhcCccccEEEe
Q 014503 67 RVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKG---PPVLSMEERLALVSGLKWVDEVIA 134 (423)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~---~pi~t~eER~~~l~~~~~VD~vi~ 134 (423)
++-+..+---+|-||+.|+++|++.+|.++|.+.-+|.=..... ...-+.+.=+++++.. +||.++.
T Consensus 23 ~igfVPTMGaLHeGHlsLi~~A~~~~d~vVVSIFVNP~QF~~~eD~~~YPR~~e~D~~ll~~~-gvD~vF~ 92 (280)
T PF02569_consen 23 TIGFVPTMGALHEGHLSLIRRARAENDVVVVSIFVNPTQFGPNEDFDKYPRTLERDLELLEKA-GVDAVFA 92 (280)
T ss_dssp SEEEEEE-SS--HHHHHHHHHHHHHSSEEEEEE---GGGSSTTSHTTTS---HHHHHHHHHHT-T-SEEE-
T ss_pred eEEEECCCchhhHHHHHHHHHHHhCCCEEEEEECcCcccCCCcchhhhCCCChHHHHHHHhcc-CCCEEEc
Confidence 34555566668999999999999999999999987774221111 2344567777888876 8998885
No 139
>PRK04149 sat sulfate adenylyltransferase; Reviewed
Probab=94.34 E-value=0.88 Score=47.28 Aligned_cols=95 Identities=19% Similarity=0.142 Sum_probs=61.2
Q ss_pred CCeEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhcCcc----ccEEEe-cCCc
Q 014503 64 KRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKW----VDEVIA-NAPY 138 (423)
Q Consensus 64 ~~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~~----VD~vi~-~~p~ 138 (423)
+-++|++.=+-+++|.||..+++.|.+.+|.|++ ++ .+-..| +-=++.+-|.+-.+.+.- -+.++. ..|.
T Consensus 185 gw~~VvafqTrnP~HraHe~l~~~a~e~~d~lll--~p--lvG~~k-~~di~~~~r~~~~~~~~~~y~p~~~v~l~~lp~ 259 (391)
T PRK04149 185 GWKTVVAFQTRNPPHRAHEYLQKCALEIVDGLLL--NP--LVGETK-SGDIPAEVRMEAYEALLKNYYPKDRVLLSVTPA 259 (391)
T ss_pred CCCeEEEeecCCCCchHHHHHHHHHHHhcCeEEE--ec--CcCCCC-CCCCCHHHHHHHHHHHHHhcCCCCcEEEEeccc
Confidence 3457888889999999999999999999984444 22 111122 345677888887776311 123322 1222
Q ss_pred cc-----cHHHHHHHH-hhcCccEEEEcCCC
Q 014503 139 AI-----TEQFMNRLF-NEHKIDYIIHGDDP 163 (423)
Q Consensus 139 ~~-----~~efl~~ll-~~~~~d~VV~G~D~ 163 (423)
.+ .+..+..++ +.|+|..+++|-|.
T Consensus 260 ~mryAGPrEa~lhAivrkN~GcTh~IvGrDH 290 (391)
T PRK04149 260 AMRYAGPREAIFHAIVRKNYGCTHFIVGRDH 290 (391)
T ss_pred hhcccCcHHHHHHHHHHHhCCCCeEEECCCC
Confidence 11 134555555 56999999999986
No 140
>PRK13477 bifunctional pantoate ligase/cytidylate kinase; Provisional
Probab=93.96 E-value=0.096 Score=56.18 Aligned_cols=65 Identities=22% Similarity=0.424 Sum_probs=43.5
Q ss_pred eEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecC-------hhhhhccCCCCCCCCHHHHHHHHHhhcccCeeEEcC
Q 014503 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTD-------QIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGA 329 (423)
Q Consensus 257 ~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D-------~~v~~~Kg~~~pi~~~~ER~~~v~~~~~Vd~Vvi~~ 329 (423)
+|++++ +-=-+|.||++++++|++.+|.+||.|.-+ +...+ +|- +++.=...+... .||.|+..+
T Consensus 21 ~ig~VP-TMG~LH~GHlsLi~~A~~~~d~vVvSIFVNP~QF~~~eD~~~-----YPr-~~~~D~~~l~~~-gvd~vf~P~ 92 (512)
T PRK13477 21 TIGFVP-TMGALHQGHLSLIRRARQENDVVLVSIFVNPLQFGPNEDLER-----YPR-TLEADRELCESA-GVDAIFAPS 92 (512)
T ss_pred cEEEEC-CCcchhHHHHHHHHHHHHhCCEEEEEEccCcccCCCchhhhh-----CCC-CHHHHHHHHHhc-CCCEEECCC
Confidence 555554 233489999999999999999999999533 33322 343 444445555554 588777654
No 141
>COG0414 PanC Panthothenate synthetase [Coenzyme metabolism]
Probab=93.58 E-value=0.28 Score=48.20 Aligned_cols=74 Identities=26% Similarity=0.240 Sum_probs=48.2
Q ss_pred hhcCCCCCeEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhh-ccCC--CCCCcHHHHHHHHhcCccccEEEe
Q 014503 58 KKCGKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEII-ANKG--PPVLSMEERLALVSGLKWVDEVIA 134 (423)
Q Consensus 58 ~~~~~~~~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~-~~K~--~pi~t~eER~~~l~~~~~VD~vi~ 134 (423)
.+++.. ++|-+.=+--.+|-||+.|+++|++.+|.++|.+.-++.=. ++.. ...=+++.=+++++.. +||.++.
T Consensus 16 ~~r~~g--k~Vg~VPTMG~LH~GHlsLVr~A~~~~d~VVVSIFVNP~QFg~~EDl~~YPR~l~~D~~~le~~-gvd~vF~ 92 (285)
T COG0414 16 ALRKEG--KRVGLVPTMGNLHEGHLSLVRRAKKENDVVVVSIFVNPLQFGPNEDLDRYPRTLERDLELLEKE-GVDIVFA 92 (285)
T ss_pred HHHHcC--CEEEEEcCCcccchHHHHHHHHHhhcCCeEEEEEEeChhhcCCchhhhhCCCCHHHHHHHHHhc-CCcEEeC
Confidence 444433 35666667778999999999999999999998887776421 1111 1223444555555554 6776664
No 142
>PF01747 ATP-sulfurylase: ATP-sulfurylase; InterPro: IPR002650 This entry consists of sulphate adenylyltransferase or ATP-sulfurylase (2.7.7.4 from EC) some of which are part of a bifunctional polypeptide chain associated with adenosyl phosphosulphate (APS) kinase, IPR002891 from INTERPRO. Both enzymes are required for PAPS (phosphoadenosine-phosphosulphate) synthesis from inorganic sulphate []. ATP sulfurylase catalyses the synthesis of adenosine-phosphosulphate APS from ATP and inorganic sulphate [].; GO: 0004781 sulfate adenylyltransferase (ATP) activity, 0000103 sulfate assimilation; PDB: 3CR8_B 1M8P_C 1I2D_B 1JHD_A 1V47_B 1X6V_B 1XNJ_A 1XJQ_B 2QJF_A 2GKS_B ....
Probab=93.28 E-value=0.38 Score=45.95 Aligned_cols=93 Identities=20% Similarity=0.252 Sum_probs=54.4
Q ss_pred eEEEEecccCcCcHHHHHHHHHHHHhc-CeeEEEEecchhhhccCCCCCCcHHHHHHHHhcCc----cccEEEecCCccc
Q 014503 66 VRVYMDGCFDLMHYGHANALRQAKALG-DELVVGVVSDEEIIANKGPPVLSMEERLALVSGLK----WVDEVIANAPYAI 140 (423)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~~~-d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~----~VD~vi~~~p~~~ 140 (423)
++|++.=+-+++|.||..+++.|.+.+ +.|++-..- -..| +--++.+-|.+-.+.+. --+.++. .++..
T Consensus 21 ~~VvafqtrnPlHraHe~l~~~a~e~~~~~lll~plv----G~~k-~~d~~~~~r~~~~~~~~~~y~p~~~v~l-~~lp~ 94 (215)
T PF01747_consen 21 RRVVAFQTRNPLHRAHEYLMRRALEKAGDGLLLHPLV----GPTK-PGDIPYEVRVRCYEALIDNYFPKNRVLL-SPLPL 94 (215)
T ss_dssp SSEEEEEESS---HHHHHHHHHHHHHHTSEEEEEEBE----SB-S-TTSCCHHHHHHHHHHHHHHCSSTTGEEE-EBBES
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHHHHhcCcEEEEecc----CCCC-cCCCCHHHHHHHHHHHHHHhCCCCcEEE-eccCc
Confidence 457777779999999999999999987 655543322 1222 34567788877766521 1233333 22222
Q ss_pred c-------HHHHHHHH-hhcCccEEEEcCCCC
Q 014503 141 T-------EQFMNRLF-NEHKIDYIIHGDDPC 164 (423)
Q Consensus 141 ~-------~efl~~ll-~~~~~d~VV~G~D~~ 164 (423)
+ +.-+..++ +.++|..+++|.|..
T Consensus 95 ~mr~aGPrEallhAiirkN~GcTh~IvGrdhA 126 (215)
T PF01747_consen 95 PMRYAGPREALLHAIIRKNYGCTHFIVGRDHA 126 (215)
T ss_dssp B---SHHHHHHHHHHHHHHTT-SEEEE-TTTT
T ss_pred hhcccCcHHHHHHHHHHHHCCCceEEeCCcCC
Confidence 2 34455555 569999999999964
No 143
>COG2046 MET3 ATP sulfurylase (sulfate adenylyltransferase) [Inorganic ion transport and metabolism]
Probab=92.93 E-value=1.4 Score=45.14 Aligned_cols=96 Identities=21% Similarity=0.160 Sum_probs=61.5
Q ss_pred CCeEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhc----CccccEEEec-CCc
Q 014503 64 KRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG----LKWVDEVIAN-APY 138 (423)
Q Consensus 64 ~~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~----~~~VD~vi~~-~p~ 138 (423)
.=++|++.=++|++|.||-.+.+.|.+.+|.|+|-+.- -..| +-=.+.+-|++..+. .--=|.+++. .|+
T Consensus 182 gwk~vvafQTRNp~HraHEyl~K~Al~~vdgllv~plV----G~tk-~gD~~~e~rm~~ye~l~~~Yyp~dr~~Ls~~~~ 256 (397)
T COG2046 182 GWKTVVAFQTRNPPHRAHEYLQKRALEKVDGLLVHPLV----GATK-PGDIPDEVRMEYYEALLKHYYPPDRVFLSVLPA 256 (397)
T ss_pred CCeEEEEEecCCCchHHHHHHHHHHHHhcCcEEEEeee----cccc-CCCchHHHHHHHHHHHHHhCCCCCcEEEEecHH
Confidence 34689999999999999999999999999865443221 1112 223456666665543 2114555541 232
Q ss_pred ccc-----HHHHHHHH-hhcCccEEEEcCCCC
Q 014503 139 AIT-----EQFMNRLF-NEHKIDYIIHGDDPC 164 (423)
Q Consensus 139 ~~~-----~efl~~ll-~~~~~d~VV~G~D~~ 164 (423)
.+- +.-+..++ +.|+|...++|-|..
T Consensus 257 aMRyagPrEa~~HaIIRkNyGcTHfIVGRDHA 288 (397)
T COG2046 257 AMRYAGPREALLHAIIRKNYGCTHFIVGRDHA 288 (397)
T ss_pred HhhhcCcHHHHHHHHHHhhcCCeeeeecCCCC
Confidence 221 34455555 469999999999964
No 144
>PRK13477 bifunctional pantoate ligase/cytidylate kinase; Provisional
Probab=92.73 E-value=0.26 Score=52.91 Aligned_cols=68 Identities=19% Similarity=0.244 Sum_probs=51.5
Q ss_pred EEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchh-hhccCC--CCCCcHHHHHHHHhcCccccEEEec
Q 014503 67 RVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEE-IIANKG--PPVLSMEERLALVSGLKWVDEVIAN 135 (423)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~-i~~~K~--~pi~t~eER~~~l~~~~~VD~vi~~ 135 (423)
+|-+.-+-=.+|-||+.|+++|++.+|.++|.+.-+|. ..+... ...-+.++=+++++.. +||.|+..
T Consensus 21 ~ig~VPTMG~LH~GHlsLi~~A~~~~d~vVvSIFVNP~QF~~~eD~~~YPr~~~~D~~~l~~~-gvd~vf~P 91 (512)
T PRK13477 21 TIGFVPTMGALHQGHLSLIRRARQENDVVLVSIFVNPLQFGPNEDLERYPRTLEADRELCESA-GVDAIFAP 91 (512)
T ss_pred cEEEECCCcchhHHHHHHHHHHHHhCCEEEEEEccCcccCCCchhhhhCCCCHHHHHHHHHhc-CCCEEECC
Confidence 56777788889999999999999999999999866664 111111 3345677788888886 89988753
No 145
>cd00517 ATPS ATP-sulfurylase. ATP-sulfurylase (ATPS), also known as sulfate adenylate transferase, catalyzes the transfer of an adenylyl group from ATP to sulfate, forming adenosine 5'-phosphosulfate (APS). This reaction is generally accompanied by a further reaction, catalyzed by APS kinase, in which APS is phosphorylated to yield 3'-phospho-APS (PAPS). In some organisms the APS kinase is a separate protein, while in others it is incorporated with ATP sulfurylase in a bifunctional enzyme that catalyzes both reactions. In bifunctional proteins, the domain that performs the kinase activity can be attached at the N-terminal end of the sulfurylase unit or at the C-terminal end, depending on the organism. While the reaction is ubiquitous among organisms, the physiological role of the reaction varies. In some organisms it is used to generate APS from sulfate and ATP, while in others it proceeds in the opposite direction to generate ATP from APS and pyrophosphate. ATP sulfurylase can be
Probab=92.71 E-value=1.4 Score=45.10 Aligned_cols=96 Identities=19% Similarity=0.215 Sum_probs=60.9
Q ss_pred CCeEEEEecccCcCcHHHHHHHHHHHHhc--CeeEEEEecchhhhccCCCCCCcHHHHHHHHhcCc--cc--cEEEe-cC
Q 014503 64 KRVRVYMDGCFDLMHYGHANALRQAKALG--DELVVGVVSDEEIIANKGPPVLSMEERLALVSGLK--WV--DEVIA-NA 136 (423)
Q Consensus 64 ~~~~V~~~G~FD~lH~GH~~lL~qA~~~~--d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~--~V--D~vi~-~~ 136 (423)
+-++|++.=+-+++|.||..+++.|.+.+ +.|++-.. +-..| +-=++.+-|.+-.+.+. +. +.++. ..
T Consensus 155 gw~~VvafqtrnP~HraHe~l~~~a~~~~~~~~lll~pl----vG~~k-~~d~~~~~r~~~~~~l~~~y~~~~~~~l~~l 229 (353)
T cd00517 155 GWRRVVAFQTRNPMHRAHEELMKRAAEKLLNDGLLLHPL----VGWTK-PGDVPDEVRMRAYEALLEEYYLPERTVLAIL 229 (353)
T ss_pred CCCeEEEeecCCCCchhhHHHHHHHHHHcCCCcEEEEec----cCCCC-CCCCCHHHHHHHHHHHHHhCCCCCcEEEEec
Confidence 33578888999999999999999999987 43333221 11112 34567788887776531 22 44433 22
Q ss_pred Ccccc-----HHHHHHHH-hhcCccEEEEcCCCC
Q 014503 137 PYAIT-----EQFMNRLF-NEHKIDYIIHGDDPC 164 (423)
Q Consensus 137 p~~~~-----~efl~~ll-~~~~~d~VV~G~D~~ 164 (423)
|+.+- +..+..++ +.++|..+++|-|..
T Consensus 230 p~~mryAGPrEallhAiirkN~GcThfIvGrDHA 263 (353)
T cd00517 230 PLPMRYAGPREALWHAIIRKNYGATHFIVGRDHA 263 (353)
T ss_pred cchhcccCcHHHHHHHHHHHhCCCCeEEECCCCC
Confidence 32211 34455555 569999999999863
No 146
>PF02569 Pantoate_ligase: Pantoate-beta-alanine ligase; InterPro: IPR003721 D-Pantothenate is synthesized via four enzymes from ketoisovalerate, which is an intermediate of branched-chain amino acid synthesis []. Pantoate-beta-alanine ligase, also know as pantothenate synthase, (6.3.2.1 from EC) catalyzes the formation of pantothenate from pantoate and alanine in the pantothenate biosynthesis pathway [].; GO: 0004592 pantoate-beta-alanine ligase activity, 0015940 pantothenate biosynthetic process; PDB: 3MUE_C 1V8F_B 1UFV_A 2X3F_B 1MOP_A 3COY_B 3IOC_A 1N2E_A 3IVX_A 1N2H_A ....
Probab=92.70 E-value=0.24 Score=49.11 Aligned_cols=72 Identities=18% Similarity=0.305 Sum_probs=37.0
Q ss_pred CCeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccC--CCCCCCCHHHHHHHHHhhcccCeeEEcC
Q 014503 255 NARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRG--SYHPIMHLHERSLSVLACRYVDEVIIGA 329 (423)
Q Consensus 255 ~~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg--~~~pi~~~~ER~~~v~~~~~Vd~Vvi~~ 329 (423)
++++++++= -=-+|.||++++++|++.+|.+||.|.-+..=....- ..+|- +++.=+..+.+. .||.|+..+
T Consensus 21 ~~~igfVPT-MGaLHeGHlsLi~~A~~~~d~vVVSIFVNP~QF~~~eD~~~YPR-~~e~D~~ll~~~-gvD~vF~Ps 94 (280)
T PF02569_consen 21 GKTIGFVPT-MGALHEGHLSLIRRARAENDVVVVSIFVNPTQFGPNEDFDKYPR-TLERDLELLEKA-GVDAVFAPS 94 (280)
T ss_dssp TSSEEEEEE--SS--HHHHHHHHHHHHHSSEEEEEE---GGGSSTTSHTTTS----HHHHHHHHHHT-T-SEEE---
T ss_pred CCeEEEECC-CchhhHHHHHHHHHHHhCCCEEEEEECcCcccCCCcchhhhCCC-ChHHHHHHHhcc-CCCEEEcCC
Confidence 456666652 2235999999999999999999999974432111000 01343 344444545444 588777643
No 147
>KOG3199 consensus Nicotinamide mononucleotide adenylyl transferase [Coenzyme transport and metabolism]
Probab=92.30 E-value=2.7 Score=39.82 Aligned_cols=60 Identities=22% Similarity=0.164 Sum_probs=45.9
Q ss_pred CeEEEEecccCcCcHHHHHHHHHHHHhc-----CeeEEEEecchhhhccCCCCCCcHHHHHHHHhc
Q 014503 65 RVRVYMDGCFDLMHYGHANALRQAKALG-----DELVVGVVSDEEIIANKGPPVLSMEERLALVSG 125 (423)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~~-----d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~ 125 (423)
+.-.++.|+|.|+-.+|..+++-|+..- -+++=|+-| |.-..+|.+-+.+.-.|+.|++.
T Consensus 8 ~v~l~A~gSFNpiT~~HLrmfElAkd~l~~t~~~~Vv~GimS-PV~DaYkKKgLipa~hrv~~~El 72 (234)
T KOG3199|consen 8 PVVLLACGSFNPITNLHLRMFELAKDYLNETGRYRVVKGIMS-PVGDAYKKKGLIPAYHRVRMVEL 72 (234)
T ss_pred eEEEEEecccCchhHHHHHHHHHHHHHHhccCCeEEEeeEec-ccchhhhccccchhhhHHHHHHh
Confidence 4456889999999999999999999853 245556554 33334666789999999999985
No 148
>COG0414 PanC Panthothenate synthetase [Coenzyme metabolism]
Probab=91.91 E-value=0.28 Score=48.18 Aligned_cols=70 Identities=26% Similarity=0.422 Sum_probs=46.1
Q ss_pred CCCCeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCC-----CCCCCCHHHHHHHHHhhcccCeeEE
Q 014503 253 GPNARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGS-----YHPIMHLHERSLSVLACRYVDEVII 327 (423)
Q Consensus 253 ~~~~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~-----~~pi~~~~ER~~~v~~~~~Vd~Vvi 327 (423)
..+++|++++ +---+|.||+.++++|++.+|.+||.|.-+..=. |+ ++|= .-+|-..++.-..||-++.
T Consensus 19 ~~gk~Vg~VP-TMG~LH~GHlsLVr~A~~~~d~VVVSIFVNP~QF---g~~EDl~~YPR--~l~~D~~~le~~gvd~vF~ 92 (285)
T COG0414 19 KEGKRVGLVP-TMGNLHEGHLSLVRRAKKENDVVVVSIFVNPLQF---GPNEDLDRYPR--TLERDLELLEKEGVDIVFA 92 (285)
T ss_pred HcCCEEEEEc-CCcccchHHHHHHHHHhhcCCeEEEEEEeChhhc---CCchhhhhCCC--CHHHHHHHHHhcCCcEEeC
Confidence 3467777776 3445899999999999999999999998553211 11 1222 2245455555556776665
Q ss_pred c
Q 014503 328 G 328 (423)
Q Consensus 328 ~ 328 (423)
.
T Consensus 93 P 93 (285)
T COG0414 93 P 93 (285)
T ss_pred C
Confidence 3
No 149
>PRK05537 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; Validated
Probab=90.44 E-value=1.8 Score=47.27 Aligned_cols=97 Identities=15% Similarity=0.093 Sum_probs=60.7
Q ss_pred CCeEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhcCc---cccEEEe-cCCcc
Q 014503 64 KRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLK---WVDEVIA-NAPYA 139 (423)
Q Consensus 64 ~~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~---~VD~vi~-~~p~~ 139 (423)
+-++|++.=+-+++|.||..+++.|.+.++. .+-+++ .+-..| +--++.+-|.+-.+.+. --+.++. ..|..
T Consensus 185 gw~~v~afqtrnP~Hr~He~l~~~a~~~~d~-~lll~p--~~G~~k-~~d~~~~~r~~~~~~~~~~~p~~~~~l~~~p~~ 260 (568)
T PRK05537 185 GWRRVVAFQTRNPLHRAHEELTKRAAREVGA-NLLIHP--VVGMTK-PGDIDHFTRVRCYEALLDKYPPATTLLSLLPLA 260 (568)
T ss_pred CCCcEEEEecCCCCcHHHHHHHHHHHHhcCC-eEEEec--CCCCCC-CCCCCHHHHHHHHHHHHHhCCCCcEEEEeccch
Confidence 3457888889999999999999999998873 223333 111122 34567788887776521 1222222 12221
Q ss_pred c-----cHHHHHHHH-hhcCccEEEEcCCCC
Q 014503 140 I-----TEQFMNRLF-NEHKIDYIIHGDDPC 164 (423)
Q Consensus 140 ~-----~~efl~~ll-~~~~~d~VV~G~D~~ 164 (423)
+ .+..+..++ +.++|..+++|-|+.
T Consensus 261 mryaGpreai~hAi~r~N~Gcth~ivGrdhA 291 (568)
T PRK05537 261 MRMAGPREALWHAIIRRNYGCTHFIVGRDHA 291 (568)
T ss_pred hcccCcHHHHHHHHHHHhCCCCeEEECCCCC
Confidence 1 134555555 579999999998864
No 150
>KOG3042 consensus Panthothenate synthetase [Coenzyme transport and metabolism]
Probab=88.37 E-value=1.2 Score=42.25 Aligned_cols=67 Identities=21% Similarity=0.254 Sum_probs=43.4
Q ss_pred EEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhh-ccCC--CCCCcHHHHHHHHhcCccccEEEe
Q 014503 67 RVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEII-ANKG--PPVLSMEERLALVSGLKWVDEVIA 134 (423)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~-~~K~--~pi~t~eER~~~l~~~~~VD~vi~ 134 (423)
++-+.-+--.+|-||..|++|+++..++.+|.+.-++.-. +... ...-+...-+..++++ +||.|+.
T Consensus 25 tIgfVPTMG~LHeGH~SLvrqs~~~~~~tVVSIfVNP~QF~pteDL~~YPrt~~~D~~~L~~L-gvdvvfa 94 (283)
T KOG3042|consen 25 TIGFVPTMGCLHEGHASLVRQSVKENTYTVVSIFVNPSQFAPTEDLDNYPRTLPDDIKLLESL-GVDVVFA 94 (283)
T ss_pred eEEEecccccccccHHHHHHHHHhhCceEEEEEEechhhcCChhHhhcCCccCccHHHHHHhc-CceEEEc
Confidence 3344445566999999999999999998888887766421 1111 1122334556667776 7777663
No 151
>PLN02341 pfkB-type carbohydrate kinase family protein
Probab=79.78 E-value=0.5 Score=50.20 Aligned_cols=29 Identities=14% Similarity=0.140 Sum_probs=26.7
Q ss_pred CCeEEEEcCeeccCCHHHHHHHHHHHhcC
Q 014503 255 NARVVYIDGAFDLFHAGHVEILKKARQLG 283 (423)
Q Consensus 255 ~~~iv~~~G~FDl~H~GHi~~L~~A~~~g 283 (423)
+.++++.+|+||.+|.||+.+|.++..-|
T Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (470)
T PLN02341 413 NEDDTFWAELLKNSDCSEISFLSKMAING 441 (470)
T ss_pred CcchhHHHHhhcccccchhhhhhhhhhcc
Confidence 67899999999999999999999998765
No 152
>TIGR00339 sopT ATP sulphurylase. Members of this family also include the dissimilatory sulfate adenylyltransferase (sat) of the sulfate reducer Archaeoglobus fulgidus.
Probab=77.41 E-value=6.9 Score=40.62 Aligned_cols=89 Identities=15% Similarity=0.122 Sum_probs=56.6
Q ss_pred eEEEEcCeeccCCHHHHHHHHHHHhc--CCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhhc--ccC--eeEEc-C
Q 014503 257 RVVYIDGAFDLFHAGHVEILKKARQL--GDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACR--YVD--EVIIG-A 329 (423)
Q Consensus 257 ~iv~~~G~FDl~H~GHi~~L~~A~~~--gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~~--~Vd--~Vvi~-~ 329 (423)
+.|+--=+|||+|.||..+.+.|.+. +|.|++-..-- ..| .-.++.+-|+.+++.+. |-. .|++. .
T Consensus 184 ~~Vvafqt~nPiHr~H~~l~~~a~e~l~~d~lll~P~~g----~~k---~~~~~~~~R~~~~~~~~~~~~~~~~~~l~~~ 256 (383)
T TIGR00339 184 DTVVAFQTRNPMHRAHEELTKRAARSLPNAGVLVHPLVG----LTK---PGDIPAEVRMRAYEVLKEGYPNPERVMLTFL 256 (383)
T ss_pred CeEEEeccCCCCchHHHHHHHHHHHHcCCCeEEEEeCCC----CCC---CCCCCHHHHHHHHHHHHhhCCCCCceEEEec
Confidence 44555788999999999999999987 68665554422 122 24679999998887752 222 33221 1
Q ss_pred CC-----Cch---HH--HHhhcCccEEEecCCc
Q 014503 330 PW-----EVT---KD--MITTFNICLVVHGTVS 352 (423)
Q Consensus 330 p~-----~~~---~~--~i~~~~~d~vv~G~d~ 352 (423)
|+ ... .. +-+.+++..++-|.|.
T Consensus 257 ~~em~~agpreall~Aiir~nyG~th~IiG~Dh 289 (383)
T TIGR00339 257 PLAMRYAGPREAIWHAIIRKNYGATHFIVGRDH 289 (383)
T ss_pred chHhhcCCcHHHHHHHHHHHHCCCCEEEECCCC
Confidence 11 111 11 2345788899999775
No 153
>KOG3042 consensus Panthothenate synthetase [Coenzyme transport and metabolism]
Probab=76.87 E-value=4.1 Score=38.83 Aligned_cols=40 Identities=13% Similarity=0.458 Sum_probs=33.3
Q ss_pred CCeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChh
Q 014503 255 NARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQI 295 (423)
Q Consensus 255 ~~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~ 295 (423)
+++|++++ +--.+|.||.++.+++.+..++.+|.|.-+..
T Consensus 23 g~tIgfVP-TMG~LHeGH~SLvrqs~~~~~~tVVSIfVNP~ 62 (283)
T KOG3042|consen 23 GETIGFVP-TMGCLHEGHASLVRQSVKENTYTVVSIFVNPS 62 (283)
T ss_pred CCeEEEec-ccccccccHHHHHHHHHhhCceEEEEEEechh
Confidence 56777776 34568999999999999999999999986643
No 154
>KOG3199 consensus Nicotinamide mononucleotide adenylyl transferase [Coenzyme transport and metabolism]
Probab=64.33 E-value=24 Score=33.64 Aligned_cols=69 Identities=14% Similarity=0.158 Sum_probs=47.5
Q ss_pred eEEEEcCeeccCCHHHHHHHHHHHhc----C-CEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHh-hcccCeeEEc
Q 014503 257 RVVYIDGAFDLFHAGHVEILKKARQL----G-DFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA-CRYVDEVIIG 328 (423)
Q Consensus 257 ~iv~~~G~FDl~H~GHi~~L~~A~~~----g-d~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~-~~~Vd~Vvi~ 328 (423)
-+.+..|+|.+.+.+|+.+++-|+.. + -.++=|+-|--.- .||. +.+.+..-|+.++++ |+.-|.+-++
T Consensus 9 v~l~A~gSFNpiT~~HLrmfElAkd~l~~t~~~~Vv~GimSPV~D-aYkK--KgLipa~hrv~~~ElAt~~Skwl~vD 83 (234)
T KOG3199|consen 9 VVLLACGSFNPITNLHLRMFELAKDYLNETGRYRVVKGIMSPVGD-AYKK--KGLIPAYHRVRMVELATETSKWLMVD 83 (234)
T ss_pred EEEEEecccCchhHHHHHHHHHHHHHHhccCCeEEEeeEecccch-hhhc--cccchhhhHHHHHHhhhccccceecc
Confidence 34577899999999999999999942 3 3566677643211 3443 368899999977754 5655566553
No 155
>PLN02341 pfkB-type carbohydrate kinase family protein
Probab=38.62 E-value=9.1 Score=40.70 Aligned_cols=29 Identities=7% Similarity=0.038 Sum_probs=25.8
Q ss_pred CCeEEEEecccCcCcHHHHHHHHHHHHhc
Q 014503 64 KRVRVYMDGCFDLMHYGHANALRQAKALG 92 (423)
Q Consensus 64 ~~~~V~~~G~FD~lH~GH~~lL~qA~~~~ 92 (423)
+.+.+++-||||.+|.||+.+|.++..-+
T Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (470)
T PLN02341 413 NEDDTFWAELLKNSDCSEISFLSKMAING 441 (470)
T ss_pred CcchhHHHHhhcccccchhhhhhhhhhcc
Confidence 45688999999999999999999998765
No 156
>COG2046 MET3 ATP sulfurylase (sulfate adenylyltransferase) [Inorganic ion transport and metabolism]
Probab=30.68 E-value=57 Score=33.75 Aligned_cols=93 Identities=18% Similarity=0.116 Sum_probs=58.4
Q ss_pred CCCeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEE-EEecChhhhhccCCCCCCCCHHHHHHHHHhh--c-c-cCeeEEc
Q 014503 254 PNARVVYIDGAFDLFHAGHVEILKKARQLGDFLLV-GIYTDQIVSEHRGSYHPIMHLHERSLSVLAC--R-Y-VDEVIIG 328 (423)
Q Consensus 254 ~~~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiV-gv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~--~-~-Vd~Vvi~ 328 (423)
.+-++|+.--++++.|.||-.+.+.|....|-|+| -|-.. .|. -=++.+-|++..+++ . | =|.+++.
T Consensus 181 kgwk~vvafQTRNp~HraHEyl~K~Al~~vdgllv~plVG~-----tk~---gD~~~e~rm~~ye~l~~~Yyp~dr~~Ls 252 (397)
T COG2046 181 KGWKTVVAFQTRNPPHRAHEYLQKRALEKVDGLLVHPLVGA-----TKP---GDIPDEVRMEYYEALLKHYYPPDRVFLS 252 (397)
T ss_pred cCCeEEEEEecCCCchHHHHHHHHHHHHhcCcEEEEeeecc-----ccC---CCchHHHHHHHHHHHHHhCCCCCcEEEE
Confidence 35678889999999999999999999999994433 22211 122 124667777666654 2 3 3555552
Q ss_pred C-CC---------CchHHHHhh-cCccEEEecCCcCC
Q 014503 329 A-PW---------EVTKDMITT-FNICLVVHGTVSET 354 (423)
Q Consensus 329 ~-p~---------~~~~~~i~~-~~~d~vv~G~d~~~ 354 (423)
- |+ .+-..++++ +++.-++-|-|...
T Consensus 253 ~~~~aMRyagPrEa~~HaIIRkNyGcTHfIVGRDHAG 289 (397)
T COG2046 253 VLPAAMRYAGPREALLHAIIRKNYGCTHFIVGRDHAG 289 (397)
T ss_pred ecHHHhhhcCcHHHHHHHHHHhhcCCeeeeecCCCCC
Confidence 1 11 111223444 78888888977643
No 157
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=29.28 E-value=5.6e+02 Score=25.35 Aligned_cols=31 Identities=32% Similarity=0.561 Sum_probs=24.6
Q ss_pred EEEEecccCc-CcHHHHHHHHHHHHhc-CeeEE
Q 014503 67 RVYMDGCFDL-MHYGHANALRQAKALG-DELVV 97 (423)
Q Consensus 67 ~V~~~G~FD~-lH~GH~~lL~qA~~~~-d~LiV 97 (423)
-++..+++.+ +|+|=.+.+++|++.| +.++|
T Consensus 96 Pivlm~Y~Npi~~~Gie~F~~~~~~~GvdGliv 128 (265)
T COG0159 96 PIVLMTYYNPIFNYGIEKFLRRAKEAGVDGLLV 128 (265)
T ss_pred CEEEEEeccHHHHhhHHHHHHHHHHcCCCEEEe
Confidence 4677789988 7899999999999987 54443
No 158
>TIGR01212 radical SAM protein, TIGR01212 family. This uncharacterized protein family shows significant similarity to TIGR01211, a longer protein that is a histone acetyltransferase at its C-terminus and is a subunit of RNA polymerase II (in yeast). This family lacks the GNAT acetyltransferase domain.
Probab=28.54 E-value=5.9e+02 Score=25.23 Aligned_cols=121 Identities=16% Similarity=0.117 Sum_probs=63.2
Q ss_pred hcccCCcccccCchhhhHHHhhhhcCCCCCeEEEEecccCcCcHHHHHHHHHHHHhcC--eeEEEEecchh-hh--ccCC
Q 014503 36 TSYFGGIGVFSLPHLWSDCFHKKKCGKKKRVRVYMDGCFDLMHYGHANALRQAKALGD--ELVVGVVSDEE-II--ANKG 110 (423)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~G~FD~lH~GH~~lL~qA~~~~d--~LiVgV~sd~~-i~--~~K~ 110 (423)
+.||++-...+++......+.......+....+-+....|.+-.-...+|++.++.|- .+.+|+-|-.. +. -+|+
T Consensus 80 ~iyf~ggt~t~l~~~~L~~l~~~i~~~~~~~~isi~trpd~l~~e~l~~L~~l~~~G~~~~i~lGlQS~~d~~L~~i~Rg 159 (302)
T TIGR01212 80 IAYFQAYTNTYAPVEVLKEMYEQALSYDDVVGLSVGTRPDCVPDEVLDLLAEYVERGYEVWVELGLQTAHDKTLKKINRG 159 (302)
T ss_pred EEEEECCCcCCCCHHHHHHHHHHHhCCCCEEEEEEEecCCcCCHHHHHHHHHhhhCCceEEEEEccCcCCHHHHHHHcCc
Confidence 3466554434454432222222222222223333444678888888888888777643 47788877553 21 1222
Q ss_pred CCCCcHHHHHHHHhc-----CccccEEEecCCccccHHHHHH--HHhhcCccEEEE
Q 014503 111 PPVLSMEERLALVSG-----LKWVDEVIANAPYAITEQFMNR--LFNEHKIDYIIH 159 (423)
Q Consensus 111 ~pi~t~eER~~~l~~-----~~~VD~vi~~~p~~~~~efl~~--ll~~~~~d~VV~ 159 (423)
.+.++..+.++. ++..-.++.+.|....+++.+. ++.+++|+.|-.
T Consensus 160 ---~t~~~~~~ai~~l~~~gi~v~~~lI~GlPget~e~~~~t~~~l~~l~~d~i~i 212 (302)
T TIGR01212 160 ---HDFACYVDAVKRARKRGIKVCSHVILGLPGEDREEMMETAKIVSLLDVDGIKI 212 (302)
T ss_pred ---ChHHHHHHHHHHHHHcCCEEEEeEEECCCCCCHHHHHHHHHHHHhcCCCEEEE
Confidence 344444444432 2223345667777655555544 445678886665
No 159
>cd00517 ATPS ATP-sulfurylase. ATP-sulfurylase (ATPS), also known as sulfate adenylate transferase, catalyzes the transfer of an adenylyl group from ATP to sulfate, forming adenosine 5'-phosphosulfate (APS). This reaction is generally accompanied by a further reaction, catalyzed by APS kinase, in which APS is phosphorylated to yield 3'-phospho-APS (PAPS). In some organisms the APS kinase is a separate protein, while in others it is incorporated with ATP sulfurylase in a bifunctional enzyme that catalyzes both reactions. In bifunctional proteins, the domain that performs the kinase activity can be attached at the N-terminal end of the sulfurylase unit or at the C-terminal end, depending on the organism. While the reaction is ubiquitous among organisms, the physiological role of the reaction varies. In some organisms it is used to generate APS from sulfate and ATP, while in others it proceeds in the opposite direction to generate ATP from APS and pyrophosphate. ATP sulfurylase can be
Probab=28.25 E-value=3.1e+02 Score=28.26 Aligned_cols=89 Identities=18% Similarity=0.182 Sum_probs=55.3
Q ss_pred eEEEEcCeeccCCHHHHHHHHHHHhcC--CEEEE-EEecChhhhhccCCCCCCCCHHHHHHHHHhh--ccc--CeeEEcC
Q 014503 257 RVVYIDGAFDLFHAGHVEILKKARQLG--DFLLV-GIYTDQIVSEHRGSYHPIMHLHERSLSVLAC--RYV--DEVIIGA 329 (423)
Q Consensus 257 ~iv~~~G~FDl~H~GHi~~L~~A~~~g--d~LiV-gv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~--~~V--d~Vvi~~ 329 (423)
+.|+--=+-+|+|.||..+++.|.+.+ |-|+| -+.. ..|. -=++.+-|+...+++ .|. |.+++..
T Consensus 157 ~~VvafqtrnP~HraHe~l~~~a~~~~~~~~lll~plvG-----~~k~---~d~~~~~r~~~~~~l~~~y~~~~~~~l~~ 228 (353)
T cd00517 157 RRVVAFQTRNPMHRAHEELMKRAAEKLLNDGLLLHPLVG-----WTKP---GDVPDEVRMRAYEALLEEYYLPERTVLAI 228 (353)
T ss_pred CeEEEeecCCCCchhhHHHHHHHHHHcCCCcEEEEeccC-----CCCC---CCCCHHHHHHHHHHHHHhCCCCCcEEEEe
Confidence 345556779999999999999999877 43332 2221 1121 236888899777776 355 6655532
Q ss_pred -CC-----CchHH----HH-hhcCccEEEecCCcC
Q 014503 330 -PW-----EVTKD----MI-TTFNICLVVHGTVSE 353 (423)
Q Consensus 330 -p~-----~~~~~----~i-~~~~~d~vv~G~d~~ 353 (423)
|+ +..+. .+ +.+++.-++-|.|..
T Consensus 229 lp~~mryAGPrEallhAiirkN~GcThfIvGrDHA 263 (353)
T cd00517 229 LPLPMRYAGPREALWHAIIRKNYGATHFIVGRDHA 263 (353)
T ss_pred ccchhcccCcHHHHHHHHHHHhCCCCeEEECCCCC
Confidence 21 11111 23 347999999997753
No 160
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=23.72 E-value=2.1e+02 Score=27.26 Aligned_cols=15 Identities=7% Similarity=0.220 Sum_probs=10.6
Q ss_pred CCCCHHHHHHHHHhc
Q 014503 189 EGVSSTDIVGRILSS 203 (423)
Q Consensus 189 ~~iSST~Ir~rI~~~ 203 (423)
.|++...+.+.+..+
T Consensus 165 GGi~~~nv~~v~~~G 179 (211)
T COG0352 165 GGINLENVPEVLEAG 179 (211)
T ss_pred cCCCHHHHHHHHHhC
Confidence 577777777776655
No 161
>PRK05198 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional
Probab=23.71 E-value=51 Score=32.51 Aligned_cols=56 Identities=25% Similarity=0.364 Sum_probs=39.0
Q ss_pred ccCcCc------------HHHHHHHHHH----HHhc-CeeEEEEecchhhhccCCCCCCcHHHHHHHHhcCcc
Q 014503 73 CFDLMH------------YGHANALRQA----KALG-DELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKW 128 (423)
Q Consensus 73 ~FD~lH------------~GH~~lL~qA----~~~~-d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~~ 128 (423)
+||+-| -|...++.-. ...| |-|++-+|+||.-....++.-++.++=.++++.++-
T Consensus 187 i~DpSHsvq~pg~~~~~s~G~r~~v~~la~AAvA~GadGl~iEvHpdP~~AlsDg~q~l~~~~~~~ll~~l~~ 259 (264)
T PRK05198 187 IFDATHSVQLPGGQGGSSGGQREFVPVLARAAVAVGVAGLFIETHPDPDNALSDGPNMLPLDKLEPLLEQLKA 259 (264)
T ss_pred EEeCCccccCCCCCCCCCCCcHHHHHHHHHHHHHcCCCEEEEEeCCCccccCCCccccCCHHHHHHHHHHHHH
Confidence 489999 5887776533 3333 889999999997655555666676666666665543
No 162
>COG0826 Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]
Probab=23.64 E-value=4.5e+02 Score=26.96 Aligned_cols=108 Identities=21% Similarity=0.196 Sum_probs=62.6
Q ss_pred HHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhcCccccEEEecCCccccHHHHHHHHhhcCccEEEEcC
Q 014503 82 ANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGD 161 (423)
Q Consensus 82 ~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~~VD~vi~~~p~~~~~efl~~ll~~~~~d~VV~G~ 161 (423)
..+++.|.+.|.+++|.++.-.. . ..+-...+=+..+..+ +||.|+...|. +-.++.+..|+.=+|..
T Consensus 52 ~e~i~~ah~~gkk~~V~~N~~~~----~-~~~~~~~~~l~~l~e~-GvDaviv~Dpg------~i~l~~e~~p~l~ih~S 119 (347)
T COG0826 52 AEAVELAHSAGKKVYVAVNTLLH----N-DELETLERYLDRLVEL-GVDAVIVADPG------LIMLARERGPDLPIHVS 119 (347)
T ss_pred HHHHHHHHHcCCeEEEEeccccc----c-chhhHHHHHHHHHHHc-CCCEEEEcCHH------HHHHHHHhCCCCcEEEe
Confidence 35556666667778888876431 1 1111223334444555 89999997774 33445566677666666
Q ss_pred CCCCCCCCCcHHHHHHhCCcEEEeccCCCCCHHHHHHHHHhc
Q 014503 162 DPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSS 203 (423)
Q Consensus 162 D~~~g~~g~~~~~~lk~~g~~~~v~r~~~iSST~Ir~rI~~~ 203 (423)
-.....+.. ..+++++.|-. .+--..-+|-.+|++-+.+.
T Consensus 120 ~q~~v~N~~-~~~f~~~~G~~-rvVl~rEls~~ei~~i~~~~ 159 (347)
T COG0826 120 TQANVTNAE-TAKFWKELGAK-RVVLPRELSLEEIKEIKEQT 159 (347)
T ss_pred eeEecCCHH-HHHHHHHcCCE-EEEeCccCCHHHHHHHHHhC
Confidence 554444443 35567777732 22233467899998776654
No 163
>PRK12457 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional
Probab=23.53 E-value=48 Score=33.00 Aligned_cols=62 Identities=23% Similarity=0.409 Sum_probs=43.8
Q ss_pred ccCcCc------------HHHHHHHH----HHHHhc-CeeEEEEecchhhhccCCCCCCcHHHHHHHHhcCccccEEEe
Q 014503 73 CFDLMH------------YGHANALR----QAKALG-DELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIA 134 (423)
Q Consensus 73 ~FD~lH------------~GH~~lL~----qA~~~~-d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~~VD~vi~ 134 (423)
+||+-| -|...++. .|...| |-|.+-+|+||.-....++..++.++=.++++.++-++.++.
T Consensus 195 i~DpSHsvq~p~~~g~~s~G~re~v~~larAAvA~GaDGl~iEvHpdP~~AlsDg~q~l~~~~~~~l~~~l~~i~~~~~ 273 (281)
T PRK12457 195 IFDVTHSLQCRDPLGAASGGRRRQVLDLARAGMAVGLAGLFLEAHPDPDRARCDGPSALPLDQLEPFLSQVKALDDLVK 273 (281)
T ss_pred EEeCCccccCCCCCCCCCCCCHHHHHHHHHHHHHhCCCEEEEEecCCccccCCCcccccCHHHHHHHHHHHHHHHHHHc
Confidence 489999 47777664 344444 889999999998666666677777777777777655554443
No 164
>PRK02615 thiamine-phosphate pyrophosphorylase; Provisional
Probab=23.04 E-value=3e+02 Score=28.31 Aligned_cols=27 Identities=33% Similarity=0.571 Sum_probs=15.5
Q ss_pred CcCcHHHHHH-HHHHHHh-cCeeEEEEec
Q 014503 75 DLMHYGHANA-LRQAKAL-GDELVVGVVS 101 (423)
Q Consensus 75 D~lH~GH~~l-L~qA~~~-~d~LiVgV~s 101 (423)
||+|.|=..+ +..|+++ +...++|++.
T Consensus 219 DGVHLgq~dl~~~~aR~llg~~~iIG~S~ 247 (347)
T PRK02615 219 DGVHLGQEDLPLAVARQLLGPEKIIGRST 247 (347)
T ss_pred CEEEeChhhcCHHHHHHhcCCCCEEEEec
Confidence 6788875443 4556653 3345666654
No 165
>PRK15452 putative protease; Provisional
Probab=22.93 E-value=8.7e+02 Score=25.75 Aligned_cols=117 Identities=15% Similarity=0.189 Sum_probs=63.8
Q ss_pred CCeEEEEcCe-e------ccCCHHHH-HHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHH-HHHHhh--cccC
Q 014503 255 NARVVYIDGA-F------DLFHAGHV-EILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERS-LSVLAC--RYVD 323 (423)
Q Consensus 255 ~~~iv~~~G~-F------Dl~H~GHi-~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~-~~v~~~--~~Vd 323 (423)
+...||+.|. | ..|..--+ +.++.|++.|-+++|.++.= |.-...+++ ..+..+ -.||
T Consensus 23 GADaVY~G~~~~~~R~~~~~f~~edl~eav~~ah~~g~kvyvt~n~i-----------~~e~el~~~~~~l~~l~~~gvD 91 (443)
T PRK15452 23 GADAVYAGQPRYSLRVRNNEFNHENLALGINEAHALGKKFYVVVNIA-----------PHNAKLKTFIRDLEPVIAMKPD 91 (443)
T ss_pred CCCEEEECCCccchhhhccCCCHHHHHHHHHHHHHcCCEEEEEecCc-----------CCHHHHHHHHHHHHHHHhCCCC
Confidence 4566788663 1 23433322 34556778888899987611 111111222 112222 2499
Q ss_pred eeEEcCCCCchHHHHhhcCccEEEecCCcCCCCCCCCCCChHHHHHhCCeE-EEeCCCCCCCHHHHHH
Q 014503 324 EVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIF-QLLESPKSITTTSVAQ 390 (423)
Q Consensus 324 ~Vvi~~p~~~~~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~-~~i~~~~~~Stt~Ii~ 390 (423)
.|++.++. ...++++..|++-+|++.+-+. ....-....+..|.- +.++ ..+|-.+|.+
T Consensus 92 gvIV~d~G--~l~~~ke~~p~l~ih~stqlni----~N~~a~~f~~~lG~~rvvLS--rELsl~EI~~ 151 (443)
T PRK15452 92 ALIMSDPG--LIMMVREHFPEMPIHLSVQANA----VNWATVKFWQQMGLTRVILS--RELSLEEIEE 151 (443)
T ss_pred EEEEcCHH--HHHHHHHhCCCCeEEEEecccC----CCHHHHHHHHHCCCcEEEEC--CcCCHHHHHH
Confidence 99999864 3468888889988998754332 111112234556642 2333 3667777664
No 166
>PRK04149 sat sulfate adenylyltransferase; Reviewed
Probab=22.68 E-value=4.1e+02 Score=27.76 Aligned_cols=90 Identities=19% Similarity=0.168 Sum_probs=55.9
Q ss_pred eEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhhc--c-c-CeeEEcC-CC
Q 014503 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACR--Y-V-DEVIIGA-PW 331 (423)
Q Consensus 257 ~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~~--~-V-d~Vvi~~-p~ 331 (423)
+.|+--=+.+|+|.||..+.+.|.+.+|-|++--. +-..|. -=++.+-|+...+++. | . +.|++.. |.
T Consensus 187 ~~VvafqTrnP~HraHe~l~~~a~e~~d~lll~pl----vG~~k~---~di~~~~r~~~~~~~~~~y~p~~~v~l~~lp~ 259 (391)
T PRK04149 187 KTVVAFQTRNPPHRAHEYLQKCALEIVDGLLLNPL----VGETKS---GDIPAEVRMEAYEALLKNYYPKDRVLLSVTPA 259 (391)
T ss_pred CeEEEeecCCCCchHHHHHHHHHHHhcCeEEEecC----cCCCCC---CCCCHHHHHHHHHHHHHhcCCCCcEEEEeccc
Confidence 44555777999999999999999999996555111 111121 2368888998887762 2 2 2343321 11
Q ss_pred -----CchH----HHH-hhcCccEEEecCCcC
Q 014503 332 -----EVTK----DMI-TTFNICLVVHGTVSE 353 (423)
Q Consensus 332 -----~~~~----~~i-~~~~~d~vv~G~d~~ 353 (423)
+..+ ..+ +.+++.-++-|.|..
T Consensus 260 ~mryAGPrEa~lhAivrkN~GcTh~IvGrDHA 291 (391)
T PRK04149 260 AMRYAGPREAIFHAIVRKNYGCTHFIVGRDHA 291 (391)
T ss_pred hhcccCcHHHHHHHHHHHhCCCCeEEECCCCC
Confidence 1111 123 347999999998753
No 167
>PRK00536 speE spermidine synthase; Provisional
Probab=21.26 E-value=1e+02 Score=30.41 Aligned_cols=95 Identities=23% Similarity=0.147 Sum_probs=48.9
Q ss_pred hhhhcCCCCCeEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhh-ccCC-CCCCcH---HHHH----HHHhcC
Q 014503 56 HKKKCGKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEII-ANKG-PPVLSM---EERL----ALVSGL 126 (423)
Q Consensus 56 ~~~~~~~~~~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~-~~K~-~pi~t~---eER~----~~l~~~ 126 (423)
......-+++++|+++|-.||- .+|+..+.-. =++.|-=|+.+. ..|. -|-+.. +.|. .+.+.-
T Consensus 64 Hppl~~h~~pk~VLIiGGGDGg------~~REvLkh~~-~v~mVeID~~Vv~~~k~~lP~~~~~~~DpRv~l~~~~~~~~ 136 (262)
T PRK00536 64 HMGGCTKKELKEVLIVDGFDLE------LAHQLFKYDT-HVDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLD 136 (262)
T ss_pred HHHHhhCCCCCeEEEEcCCchH------HHHHHHCcCC-eeEEEECCHHHHHHHHHHCHHHHHhhcCCCEEEeehhhhcc
Confidence 3333444678899999999974 5666666544 355566677542 2222 221110 0011 112211
Q ss_pred -ccccEEEecCCccccHHHHHHHHhhcCccEEEE
Q 014503 127 -KWVDEVIANAPYAITEQFMNRLFNEHKIDYIIH 159 (423)
Q Consensus 127 -~~VD~vi~~~p~~~~~efl~~ll~~~~~d~VV~ 159 (423)
..-|.+|.+.. ++++|.+.+.+.++++.+++
T Consensus 137 ~~~fDVIIvDs~--~~~~fy~~~~~~L~~~Gi~v 168 (262)
T PRK00536 137 IKKYDLIICLQE--PDIHKIDGLKRMLKEDGVFI 168 (262)
T ss_pred CCcCCEEEEcCC--CChHHHHHHHHhcCCCcEEE
Confidence 23566666533 34566655555666664443
No 168
>COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog [Amino acid transport and metabolism]
Probab=21.22 E-value=2.1e+02 Score=29.06 Aligned_cols=91 Identities=20% Similarity=0.152 Sum_probs=45.9
Q ss_pred CcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhcCccccEEEecCCccc-------c-HHHH-
Q 014503 75 DLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPYAI-------T-EQFM- 145 (423)
Q Consensus 75 D~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~~VD~vi~~~p~~~-------~-~efl- 145 (423)
|+-|.+.... .++.++.+.-+|.-||........++. .+ ++.++.+..-.+|=-+.--.+|.. + .+++
T Consensus 166 DlSH~s~kt~-~Dvl~~s~~PviaSHSN~~al~~h~RN-l~-D~qlkaI~~~gGvIgv~~~~~fl~~~~~~~atldd~v~ 242 (313)
T COG2355 166 DLSHLSDKTF-WDVLDLSKAPVVASHSNARALVDHPRN-LS-DEQLKAIAETGGVIGVNFIPAFLRPGGAARATLDDLVR 242 (313)
T ss_pred EecccCCccH-HHHHhccCCceEEecCCchhccCCCCC-CC-HHHHHHHHhcCCEEEEEeehhhccCCCCCCCCHHHHHH
Confidence 5555555332 233344555666667776532211122 23 444555554345433322122222 2 2333
Q ss_pred --HHHHhhcCccEEEEcCCCCCCCC
Q 014503 146 --NRLFNEHKIDYIIHGDDPCLLPD 168 (423)
Q Consensus 146 --~~ll~~~~~d~VV~G~D~~~g~~ 168 (423)
+.+.+..++|.|..|.||.-+..
T Consensus 243 hI~h~v~~~G~dhVglGsDf~g~~~ 267 (313)
T COG2355 243 HIDHFVELVGIDHVGLGSDFDGGTG 267 (313)
T ss_pred HHHHHHHhcCcceeEecccccCCCC
Confidence 33556789999999999865443
No 169
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=20.21 E-value=4.5e+02 Score=25.96 Aligned_cols=92 Identities=12% Similarity=0.085 Sum_probs=53.6
Q ss_pred EEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhcCccccEEEecCCccccHHHHHHH
Q 014503 69 YMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQFMNRL 148 (423)
Q Consensus 69 ~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~~VD~vi~~~p~~~~~efl~~l 148 (423)
++.|.=.-+-+-+....-++...+ ...++-++|..+.... .++.-..-=.++++...+.+-.+.+.|+... ++..
T Consensus 125 Vv~g~d~~~~~e~l~~a~~~i~~g-~~fI~tNpD~~~p~~~-g~~pgaGai~~~~~~~tg~~~~~~GKP~~~i---~~~a 199 (269)
T COG0647 125 VVVGLDRTLTYEKLAEALLAIAAG-APFIATNPDLTVPTER-GLRPGAGAIAALLEQATGREPTVIGKPSPAI---YEAA 199 (269)
T ss_pred EEEecCCCCCHHHHHHHHHHHHcC-CcEEEeCCCccccCCC-CCccCcHHHHHHHHHhhCCcccccCCCCHHH---HHHH
Confidence 333333334445544444444444 4566677776554333 3555556666777777777877888887543 3444
Q ss_pred HhhcCc---cEEEEcCCCCC
Q 014503 149 FNEHKI---DYIIHGDDPCL 165 (423)
Q Consensus 149 l~~~~~---d~VV~G~D~~~ 165 (423)
+++++. +.+++||++..
T Consensus 200 l~~~~~~~~~~~mVGD~~~T 219 (269)
T COG0647 200 LEKLGLDRSEVLMVGDRLDT 219 (269)
T ss_pred HHHhCCCcccEEEEcCCchh
Confidence 444444 79999999854
Done!