Query 014503
Match_columns 423
No_of_seqs 371 out of 3094
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 12:45:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014503.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014503hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3elb_A Ethanolamine-phosphate 100.0 3.4E-73 1.2E-77 568.3 33.0 331 63-399 5-341 (341)
2 3hl4_A Choline-phosphate cytid 100.0 2.7E-34 9.4E-39 271.7 15.5 156 251-411 71-228 (236)
3 3hl4_A Choline-phosphate cytid 100.0 5.2E-30 1.8E-34 242.5 16.4 145 57-205 68-214 (236)
4 3elb_A Ethanolamine-phosphate 100.0 6.2E-28 2.1E-32 241.3 16.1 137 255-396 6-142 (341)
5 2b7l_A Glycerol-3-phosphate cy 99.9 2.4E-23 8.3E-28 180.7 11.3 129 65-203 1-129 (132)
6 1coz_A Protein (glycerol-3-pho 99.9 3.9E-23 1.3E-27 178.6 11.1 128 65-202 1-128 (129)
7 3glv_A Lipopolysaccharide core 99.9 3.9E-22 1.3E-26 176.1 12.2 134 65-205 2-140 (143)
8 3op1_A Macrolide-efflux protei 99.8 6.8E-21 2.3E-25 187.8 12.1 136 65-203 20-177 (308)
9 1coz_A Protein (glycerol-3-pho 99.8 2.1E-20 7.3E-25 161.3 12.3 127 256-393 1-127 (129)
10 2b7l_A Glycerol-3-phosphate cy 99.8 3E-20 1E-24 161.2 12.0 129 256-395 1-129 (132)
11 1mrz_A Riboflavin kinase/FMN a 99.8 2.6E-19 8.8E-24 175.8 12.3 130 68-203 2-147 (293)
12 3glv_A Lipopolysaccharide core 99.8 1.7E-19 5.7E-24 159.2 8.5 133 256-396 2-139 (143)
13 2x0k_A Riboflavin biosynthesis 99.8 2.7E-19 9.1E-24 179.0 10.1 137 65-203 15-174 (338)
14 3nv7_A Phosphopantetheine aden 99.7 1.5E-18 5.3E-23 155.6 7.5 127 256-395 2-139 (157)
15 3k9w_A Phosphopantetheine aden 99.7 1.2E-17 3.9E-22 154.0 8.3 129 65-203 22-159 (187)
16 4f3r_A Phosphopantetheine aden 99.7 1.7E-17 5.9E-22 149.5 8.5 128 256-396 5-142 (162)
17 1qjc_A Phosphopantetheine aden 99.7 3.5E-17 1.2E-21 145.5 9.3 128 66-203 2-138 (158)
18 3k9w_A Phosphopantetheine aden 99.7 1.3E-16 4.6E-21 146.9 12.0 132 256-396 22-160 (187)
19 1o6b_A Phosphopantetheine aden 99.7 6.7E-17 2.3E-21 145.7 9.7 129 66-203 3-139 (169)
20 3nv7_A Phosphopantetheine aden 99.7 1.1E-17 3.6E-22 150.1 3.7 126 65-203 2-139 (157)
21 4f3r_A Phosphopantetheine aden 99.7 4.4E-17 1.5E-21 146.8 6.3 130 65-203 5-141 (162)
22 2qtr_A Nicotinate (nicotinamid 99.7 1E-16 3.4E-21 146.8 8.6 133 66-203 3-166 (189)
23 1kam_A Deamido-NAD(+), nicotin 99.6 1.7E-15 5.8E-20 139.7 14.9 132 66-203 8-171 (194)
24 3nbk_A Phosphopantetheine aden 99.6 4.1E-16 1.4E-20 142.2 9.2 130 253-396 18-158 (177)
25 3nd5_A Phosphopantetheine aden 99.6 4.2E-16 1.4E-20 141.6 8.8 132 256-396 2-141 (171)
26 1vlh_A Phosphopantetheine aden 99.6 1.5E-15 5.1E-20 138.1 11.1 127 256-396 12-150 (173)
27 1od6_A PPAT, phosphopantethein 99.6 2E-15 7E-20 134.4 11.5 122 68-203 3-139 (160)
28 3f3m_A Phosphopantetheine aden 99.6 2.3E-15 8E-20 136.3 10.4 132 256-396 3-141 (168)
29 3f3m_A Phosphopantetheine aden 99.6 1.5E-15 5E-20 137.7 8.7 129 65-203 3-140 (168)
30 1k4m_A NAMN adenylyltransferas 99.6 2.5E-15 8.6E-20 140.6 9.0 91 68-162 6-109 (213)
31 3nbk_A Phosphopantetheine aden 99.6 3.8E-15 1.3E-19 135.8 9.8 132 62-203 18-157 (177)
32 3nd5_A Phosphopantetheine aden 99.6 1.6E-15 5.6E-20 137.8 6.3 128 65-203 2-140 (171)
33 1qjc_A Phosphopantetheine aden 99.5 6.7E-14 2.3E-18 124.2 13.0 131 256-396 1-139 (158)
34 1yum_A 'probable nicotinate-nu 99.5 2.3E-14 8E-19 137.0 10.5 94 65-162 23-129 (242)
35 1vlh_A Phosphopantetheine aden 99.5 1.5E-14 5.1E-19 131.5 8.3 125 65-203 12-149 (173)
36 2h29_A Probable nicotinate-nuc 99.5 6.9E-14 2.3E-18 128.4 8.9 133 66-203 3-166 (189)
37 3h05_A Uncharacterized protein 99.5 1.3E-13 4.3E-18 125.9 8.7 132 66-203 3-149 (177)
38 1o6b_A Phosphopantetheine aden 99.4 4.4E-13 1.5E-17 120.7 11.1 131 256-395 2-139 (169)
39 2qjo_A Bifunctional NMN adenyl 99.4 2.8E-13 9.7E-18 133.9 10.6 130 65-203 7-151 (341)
40 1od6_A PPAT, phosphopantethein 99.4 1.7E-12 5.7E-17 115.5 13.7 129 259-395 3-139 (160)
41 1ej2_A Nicotinamide mononucleo 99.4 1.1E-12 3.8E-17 119.6 12.5 126 66-203 4-142 (181)
42 3do8_A Phosphopantetheine aden 99.4 1.8E-13 6E-18 121.5 3.3 125 67-202 2-142 (148)
43 1kam_A Deamido-NAD(+), nicotin 99.4 4.5E-12 1.6E-16 116.6 12.7 96 256-355 7-117 (194)
44 3gmi_A UPF0348 protein MJ0951; 99.4 3.6E-12 1.2E-16 128.0 12.8 94 63-161 50-151 (357)
45 2qtr_A Nicotinate (nicotinamid 99.4 1.2E-12 4.3E-17 119.4 8.3 134 256-396 2-167 (189)
46 1f9a_A Hypothetical protein MJ 99.3 1E-11 3.5E-16 111.9 13.5 126 67-203 2-136 (168)
47 1kqn_A Nmnat, nicotinamide mon 99.3 7.2E-12 2.5E-16 122.1 11.4 86 65-152 8-106 (279)
48 3do8_A Phosphopantetheine aden 99.3 3.3E-13 1.1E-17 119.7 1.4 128 258-397 2-145 (148)
49 1mrz_A Riboflavin kinase/FMN a 99.3 8.9E-12 3E-16 122.2 9.7 134 259-396 2-148 (293)
50 1nup_A FKSG76; NAD biosynthesi 99.3 1.5E-11 5E-16 118.1 10.6 88 65-152 6-104 (252)
51 1yum_A 'probable nicotinate-nu 99.2 5.2E-11 1.8E-15 113.7 13.4 92 255-351 22-129 (242)
52 1k4m_A NAMN adenylyltransferas 99.2 3.6E-11 1.2E-15 112.2 10.3 91 257-352 3-110 (213)
53 2ejc_A Pantoate--beta-alanine 99.2 1E-12 3.4E-17 127.8 -1.9 112 67-180 23-161 (280)
54 3h05_A Uncharacterized protein 99.1 7.3E-11 2.5E-15 107.6 8.0 131 256-396 2-150 (177)
55 2h29_A Probable nicotinate-nuc 99.1 1.7E-10 5.8E-15 105.6 9.3 134 256-396 2-167 (189)
56 1lw7_A Transcriptional regulat 99.1 6.7E-10 2.3E-14 111.5 14.2 129 65-200 2-154 (365)
57 1lw7_A Transcriptional regulat 99.1 2.3E-10 7.9E-15 114.8 10.3 125 256-392 2-154 (365)
58 2x0k_A Riboflavin biosynthesis 99.1 4.4E-10 1.5E-14 112.3 12.1 138 256-396 15-175 (338)
59 2qjt_B Nicotinamide-nucleotide 99.0 1E-09 3.5E-14 109.0 12.0 130 65-202 7-152 (352)
60 1f9a_A Hypothetical protein MJ 99.0 5.8E-09 2E-13 93.7 15.2 124 258-396 2-137 (168)
61 3op1_A Macrolide-efflux protei 99.0 2.1E-09 7.2E-14 105.9 13.0 136 256-396 20-178 (308)
62 1ej2_A Nicotinamide mononucleo 99.0 3.1E-09 1.1E-13 96.6 12.1 125 257-396 4-143 (181)
63 2qjo_A Bifunctional NMN adenyl 98.9 2.6E-09 9E-14 105.3 8.4 128 256-396 7-152 (341)
64 2qjt_B Nicotinamide-nucleotide 98.9 8.5E-09 2.9E-13 102.3 11.8 59 256-318 7-65 (352)
65 1v8f_A Pantoate-beta-alanine l 98.8 1.9E-10 6.5E-15 111.4 -2.6 128 65-197 19-186 (276)
66 1kqn_A Nmnat, nicotinamide mon 98.7 2.9E-08 1E-12 96.5 9.7 72 254-328 6-83 (279)
67 3ag6_A Pantothenate synthetase 98.7 1.7E-09 5.7E-14 105.1 -1.0 109 68-181 28-163 (283)
68 1nup_A FKSG76; NAD biosynthesi 98.6 1.1E-07 3.9E-12 90.9 10.0 71 256-328 6-81 (252)
69 2ejc_A Pantoate--beta-alanine 98.6 7.4E-08 2.5E-12 93.5 7.5 72 255-329 21-94 (280)
70 3cov_A Pantothenate synthetase 98.5 1.1E-08 3.7E-13 100.1 -1.7 112 67-181 34-174 (301)
71 1jhd_A Sulfate adenylyltransfe 98.3 6.2E-06 2.1E-10 83.8 14.3 133 66-203 193-371 (396)
72 1v47_A ATP sulfurylase; produc 98.3 5E-06 1.7E-10 83.2 11.9 134 66-204 156-330 (349)
73 3gmi_A UPF0348 protein MJ0951; 98.2 3.8E-06 1.3E-10 84.2 10.7 90 255-350 51-151 (357)
74 3uk2_A Pantothenate synthetase 97.5 0.00014 4.7E-09 70.4 7.1 68 66-134 22-92 (283)
75 1v8f_A Pantoate-beta-alanine l 96.9 0.0028 9.5E-08 61.2 8.7 68 258-329 21-89 (276)
76 3inn_A Pantothenate synthetase 96.6 0.0052 1.8E-07 60.1 8.6 66 65-134 43-113 (314)
77 3ag6_A Pantothenate synthetase 96.4 0.011 3.6E-07 57.3 9.5 71 255-329 22-95 (283)
78 3q12_A Pantoate--beta-alanine 96.2 0.0055 1.9E-07 59.3 5.8 65 254-328 23-96 (287)
79 3cov_A Pantothenate synthetase 95.9 0.02 6.9E-07 55.8 8.2 72 256-329 33-106 (301)
80 3q12_A Pantoate--beta-alanine 95.8 0.0098 3.4E-07 57.5 5.8 66 65-134 25-95 (287)
81 3inn_A Pantothenate synthetase 95.4 0.045 1.5E-06 53.5 8.5 70 254-328 41-114 (314)
82 1r6x_A ATP:sulfate adenylyltra 94.8 0.4 1.4E-05 48.4 14.1 94 66-164 188-292 (395)
83 3mxt_A Pantothenate synthetase 94.3 0.088 3E-06 50.8 7.4 60 70-134 32-94 (285)
84 1g8f_A Sulfate adenylyltransfe 94.3 0.45 1.5E-05 49.6 13.4 94 66-164 189-293 (511)
85 3uk2_A Pantothenate synthetase 94.1 0.12 4E-06 49.9 7.9 72 255-328 21-93 (283)
86 3mxt_A Pantothenate synthetase 94.1 0.13 4.5E-06 49.6 8.1 68 254-328 23-95 (285)
87 3n8h_A Pantothenate synthetase 93.4 0.12 4.1E-06 49.3 6.4 67 67-134 25-94 (264)
88 3n8h_A Pantothenate synthetase 92.3 0.099 3.4E-06 49.8 4.1 68 253-328 21-95 (264)
89 1v47_A ATP sulfurylase; produc 92.1 0.23 8E-06 49.3 6.8 90 257-353 156-260 (349)
90 1jhd_A Sulfate adenylyltransfe 91.9 0.2 6.8E-06 50.7 6.0 90 257-353 193-299 (396)
91 1m8p_A Sulfate adenylyltransfe 90.1 0.88 3E-05 48.0 9.2 94 66-164 191-295 (573)
92 2gks_A Bifunctional SAT/APS ki 89.2 1.4 4.8E-05 46.2 9.9 94 66-164 164-269 (546)
93 1x6v_B Bifunctional 3'-phospho 85.5 11 0.00036 40.3 14.1 97 65-164 412-525 (630)
94 3cr8_A Sulfate adenylyltranfer 83.0 7 0.00024 41.0 11.2 94 66-164 164-268 (552)
95 2gks_A Bifunctional SAT/APS ki 38.6 23 0.00079 36.9 4.2 55 258-319 165-220 (546)
96 1m8p_A Sulfate adenylyltransfe 35.3 28 0.00094 36.5 4.2 87 259-352 193-294 (573)
97 1r6x_A ATP:sulfate adenylyltra 30.1 46 0.0016 33.3 4.6 91 257-354 188-293 (395)
98 1g8f_A Sulfate adenylyltransfe 20.9 67 0.0023 33.2 3.9 91 257-354 189-294 (511)
No 1
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, cytidylyltra SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.4e-73 Score=568.33 Aligned_cols=331 Identities=45% Similarity=0.806 Sum_probs=283.5
Q ss_pred CCCeEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhcCccccEEEecCCccccH
Q 014503 63 KKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITE 142 (423)
Q Consensus 63 ~~~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~~VD~vi~~~p~~~~~ 142 (423)
.++++|++.||||++|.||+++|++|+++|++|+|||++|+.+...|++|++|.+||++++++|+|||+|++..|+....
T Consensus 5 ~~~~~v~~~G~FD~lH~GH~~lL~~A~~l~d~LiVgV~~d~~v~~~K~~pi~s~eER~~~l~~l~~VD~Vv~f~~~~~~~ 84 (341)
T 3elb_A 5 RRAVRVWCDGCYDMVHYGHSNQLRQARAMGDYLIVGVHTDEEIAKHKGPPVFTQEERYKMVQAIKWVDEVVPAAPYVTTL 84 (341)
T ss_dssp CCCCEEEEEECCCSCCHHHHHHHHHHHHTSSEEEEEECCHHHHHHHSSCCSSCHHHHHHHHHHBTTCCEEEETCCSSCCH
T ss_pred CCceEEEEEeeCCCCCHHHHHHHHHHHHhCCcCEEEeecCHHHhccCCCCCCCHHHHHHHHHHcCCCCEEEecCCCCCHH
Confidence 56789999999999999999999999999999999999999876667789999999999999999999999977876678
Q ss_pred HHHHHHHhhcCccEEEEcCCCCCCCCCCcHHHHHHhCCcEEEeccCCCCCHHHHHHHHHhcccccccccccc--CCCCCC
Q 014503 143 QFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSSMEDTKACEDHN--NASLPR 220 (423)
Q Consensus 143 efl~~ll~~~~~d~VV~G~D~~~g~~g~~~~~~lk~~g~~~~v~r~~~iSST~Ir~rI~~~~~~~~~~~~~~--~~~~~~ 220 (423)
+|+ ++++||++|+|+||++|.++.+.|+.++..|+++.+++++++|||+|++||+.+++.|+...+.. ..+...
T Consensus 85 efi----~~~~~d~vV~G~D~~~g~~~~~~~~~~k~~G~~~~~~~t~g~STT~ii~ri~~~~~~~~~~~~~~~~~~~~~~ 160 (341)
T 3elb_A 85 ETL----DKYNCDFCVHGNDITLTVDGRDTYEEVKQAGRYRECKRTQGVSTTDLVGRMLLVTKAHHSSQEMSSEYREYAD 160 (341)
T ss_dssp HHH----HHTTCSEEEECSCCCBCTTSCBTTHHHHHTTCEEECCCCTTCCHHHHHHHHHC--------------------
T ss_pred HHH----HHhCCCEEEECCCCCCCCCCcchHHHHHhCCEEEEeCCCCCCCHHHHHHHHHHhccccccccccchhhHHHHH
Confidence 887 47899999999999999999999999999999999999999999999999999999888643221 112223
Q ss_pred Cchhh--hcccccccccccccccchhccccCCCCCCCCeEEEEcCeeccCCHHHHHHHHHHHhcCC--EEEEEEecChhh
Q 014503 221 DPLRA--IQSKDAHLSQFLPTSRRIVQFSNCKGPGPNARVVYIDGAFDLFHAGHVEILKKARQLGD--FLLVGIYTDQIV 296 (423)
Q Consensus 221 ~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~iv~~~G~FDl~H~GHi~~L~~A~~~gd--~LiVgv~~D~~v 296 (423)
.|+.. +.++++.+++|++++++|.||++|+.|.+++++||++|+|||||.||+++|++|+++|| +|||||++|+++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~g~~~~~~~~iv~~~GsFD~~h~GHl~~L~rA~~l~D~~~LiVgV~~d~~v 240 (341)
T 3elb_A 161 SFGKCPGGRNPWTGVSQFLQTSQKIIQFASGKEPQPGETVIYVAGAFDLFHIGHVDFLEKVHRLAERPYIIAGLHFDQEV 240 (341)
T ss_dssp -----------CCCCCCCCCCHHHHHHHCCCCCCCTTCEEEEEEECCTTCCHHHHHHHHHHHTTSSSEEEEEEEECHHHH
T ss_pred hhccCccccCCCcceecccCCcceeeeeccCCCCCCCCEEEEEecccCCCCHHHHHHHHHHHHhCCCCEEEEEEccCHhh
Confidence 34432 44678889999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred hhccCCCCCCCCHHHHHHHHHhhcccCeeEEcCCCCchHHHHhhcCccEEEecCCcCCCCCCCCCCChHHHHHhCCeEEE
Q 014503 297 SEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQL 376 (423)
Q Consensus 297 ~~~Kg~~~pi~~~~ER~~~v~~~~~Vd~Vvi~~p~~~~~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~ 376 (423)
+++||+++|+||++||++++++|++||+|++++|+.++.+++++++||++|||++|...+ ..+.|+|.+++.+|++.+
T Consensus 241 ~~~Kg~~~pi~~~~ER~~~v~~~~~vd~V~v~~~~~l~~~~~~~~~~~~iv~G~d~~~~~--~~g~d~y~~~k~~G~~~~ 318 (341)
T 3elb_A 241 NHYKGKNYPIMNLHERTLSVLACRYVSEVVIGAPYAVTAELLSHFKVDLVCHGKTEIIPD--RDGSDPYQEPKRRGIFRQ 318 (341)
T ss_dssp HHHHCTTCCSSCHHHHHHHHHTBTTCCEEEEEECSSCCHHHHHHTTCSEEEECSSCCCCC--TTSCCTTHHHHHHTCEEE
T ss_pred HhhcCCCCCCCCHHHHHHHHHHcCCCCCEEECCCCcchHHHHHhcCCcEEEECCCCcccc--CCccchHHHHHhCCEEEE
Confidence 999998889999999999999999999999999998889999999999999999987654 356789999999999999
Q ss_pred eCCCCCCCHHHHHHHHHhchHhH
Q 014503 377 LESPKSITTTSVAQRIIANHEAY 399 (423)
Q Consensus 377 i~~~~~~Stt~Ii~RI~~~~~~y 399 (423)
+++++++|||+||+||++||++|
T Consensus 319 i~~~~~~STt~ii~RI~~nr~~~ 341 (341)
T 3elb_A 319 IDSGSNLTTDLIVQRIITNRLEY 341 (341)
T ss_dssp CCCSCCCCHHHHHHHHHC-----
T ss_pred cCCCCCCCHHHHHHHHHHHHhcC
Confidence 99999999999999999999987
No 2
>3hl4_A Choline-phosphate cytidylyltransferase A; rossmann fold, phospholipid synthesis, phosphatidylcholine, phosphocholine, CTP, CDP-choline; HET: CDC; 2.20A {Rattus norvegicus}
Probab=100.00 E-value=2.7e-34 Score=271.69 Aligned_cols=156 Identities=33% Similarity=0.669 Sum_probs=131.7
Q ss_pred CCCCCCeEEEEcCeeccCCHHHHHHHHHHHhc--CCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhhcccCeeEEc
Q 014503 251 GPGPNARVVYIDGAFDLFHAGHVEILKKARQL--GDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIG 328 (423)
Q Consensus 251 ~~~~~~~iv~~~G~FDl~H~GHi~~L~~A~~~--gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~~~Vd~Vvi~ 328 (423)
.+.+..++||++|+||+||.||+++|++|+++ ||+|||||++|+.+.++|| +|+|+++||++++++|++||+|+++
T Consensus 71 ~~~~~~~~V~~~GtFD~~H~GHl~iL~rAk~lf~gD~LIVgV~~D~~v~~~Kg--~pi~s~eER~e~v~~~k~VD~Vvv~ 148 (236)
T 3hl4_A 71 TPCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKG--FTVMNENERYDAVQHCRYVDEVVRN 148 (236)
T ss_dssp CCTTSCEEEEEEECCTTCCHHHHHHHHHHHTSSSSEEEEEEECCHHHHHHHTC--CCSSCHHHHHHHHHTBTTCSEEESS
T ss_pred CCCCCCeEEEEeccCCCCCHHHHHHHHHHHHhcCCCeEEEEEcccHHHhhcCC--CCCCCHHHHHHHHHHhCCCCeEEEC
Confidence 34456789999999999999999999999999 5899999999999988887 5999999999999999999999999
Q ss_pred CCCCchHHHHhhcCccEEEecCCcCCCCCCCCCCChHHHHHhCCeEEEeCCCCCCCHHHHHHHHHhchHhHHHHHhhhhH
Q 014503 329 APWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIANHEAYMKRNAKKAV 408 (423)
Q Consensus 329 ~p~~~~~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~i~~~~~~Stt~Ii~RI~~~~~~y~~r~~~k~~ 408 (423)
+|+.++.+++++++||+||||+++... ..+.++|..++..|+++++++++++|||.|++||++++..|++||.+|.-
T Consensus 149 ~p~~l~~d~i~~~~~d~Vv~GDd~~~~---~~~~d~y~~lk~~G~~~~v~rt~giSTT~Ii~RI~~~~~~y~~R~l~rg~ 225 (236)
T 3hl4_A 149 APWTLTPEFLAEHRIDFVAHDDIPYSS---AGSDDVYKHIKEAGMFAPTQRTEGISTSDIITRIVRDYDVYARRNLQRGY 225 (236)
T ss_dssp CCSSCCHHHHHHTTCCEEEEESSCCCC---SSCSCTTHHHHHTTCEEEECCCTTCCHHHHHHHHHHHHHC----------
T ss_pred CcCcCcHHHHHHcCCCEEEECCccccC---CCchhHHHHHHhCCeEEEeccCCCCCHHHHHHHHHHhHHHHHHHHhcCCC
Confidence 999988999999999999999886543 34567899999999999999999999999999999999999999999965
Q ss_pred hHH
Q 014503 409 SEK 411 (423)
Q Consensus 409 ~e~ 411 (423)
+.+
T Consensus 226 ~~~ 228 (236)
T 3hl4_A 226 TAK 228 (236)
T ss_dssp ---
T ss_pred CHH
Confidence 443
No 3
>3hl4_A Choline-phosphate cytidylyltransferase A; rossmann fold, phospholipid synthesis, phosphatidylcholine, phosphocholine, CTP, CDP-choline; HET: CDC; 2.20A {Rattus norvegicus}
Probab=99.97 E-value=5.2e-30 Score=242.48 Aligned_cols=145 Identities=42% Similarity=0.668 Sum_probs=132.1
Q ss_pred hhhcCCCCCeEEEEecccCcCcHHHHHHHHHHHHh--cCeeEEEEecchhhhccCCCCCCcHHHHHHHHhcCccccEEEe
Q 014503 57 KKKCGKKKRVRVYMDGCFDLMHYGHANALRQAKAL--GDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIA 134 (423)
Q Consensus 57 ~~~~~~~~~~~V~~~G~FD~lH~GH~~lL~qA~~~--~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~~VD~vi~ 134 (423)
+.....+++++||+.|+||++|.||+++|++|+++ +++|+|||++|+.+...|++|+++.+||++++++|+|||+|++
T Consensus 68 ~~~~~~~~~~~V~~~GtFD~~H~GHl~iL~rAk~lf~gD~LIVgV~~D~~v~~~Kg~pi~s~eER~e~v~~~k~VD~Vvv 147 (236)
T 3hl4_A 68 CRGTPCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENERYDAVQHCRYVDEVVR 147 (236)
T ss_dssp HHCCCTTSCEEEEEEECCTTCCHHHHHHHHHHHTSSSSEEEEEEECCHHHHHHHTCCCSSCHHHHHHHHHTBTTCSEEES
T ss_pred hcCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHhcCCCeEEEEEcccHHHhhcCCCCCCCHHHHHHHHHHhCCCCeEEE
Confidence 33344467889999999999999999999999999 5899999999998877788899999999999999999999999
Q ss_pred cCCccccHHHHHHHHhhcCccEEEEcCCCCCCCCCCcHHHHHHhCCcEEEeccCCCCCHHHHHHHHHhccc
Q 014503 135 NAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSSME 205 (423)
Q Consensus 135 ~~p~~~~~efl~~ll~~~~~d~VV~G~D~~~g~~g~~~~~~lk~~g~~~~v~r~~~iSST~Ir~rI~~~~~ 205 (423)
+.||.++.+|++ +++||+||+|+|+.++.++.+.|+.+++.|+++.+++++++|||+|++||++...
T Consensus 148 ~~p~~l~~d~i~----~~~~d~Vv~GDd~~~~~~~~d~y~~lk~~G~~~~v~rt~giSTT~Ii~RI~~~~~ 214 (236)
T 3hl4_A 148 NAPWTLTPEFLA----EHRIDFVAHDDIPYSSAGSDDVYKHIKEAGMFAPTQRTEGISTSDIITRIVRDYD 214 (236)
T ss_dssp SCCSSCCHHHHH----HTTCCEEEEESSCCCCSSCSCTTHHHHHTTCEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred CCcCcCcHHHHH----HcCCCEEEECCccccCCCchhHHHHHHhCCeEEEeccCCCCCHHHHHHHHHHhHH
Confidence 999998888885 6899999999999998888899999999999999999999999999999997643
No 4
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, cytidylyltra SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens}
Probab=99.95 E-value=6.2e-28 Score=241.27 Aligned_cols=137 Identities=32% Similarity=0.583 Sum_probs=125.3
Q ss_pred CCeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhhcccCeeEEcCCCCch
Q 014503 255 NARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVT 334 (423)
Q Consensus 255 ~~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~~~Vd~Vvi~~p~~~~ 334 (423)
.+++|+++|+||+||.||+++|++|+++||+|+|||++|+.+.+.|| .|+++++||++++++|++||+|++++|+..+
T Consensus 6 ~~~~v~~~G~FD~lH~GH~~lL~~A~~l~d~LiVgV~~d~~v~~~K~--~pi~s~eER~~~l~~l~~VD~Vv~f~~~~~~ 83 (341)
T 3elb_A 6 RAVRVWCDGCYDMVHYGHSNQLRQARAMGDYLIVGVHTDEEIAKHKG--PPVFTQEERYKMVQAIKWVDEVVPAAPYVTT 83 (341)
T ss_dssp CCCEEEEEECCCSCCHHHHHHHHHHHHTSSEEEEEECCHHHHHHHSS--CCSSCHHHHHHHHHHBTTCCEEEETCCSSCC
T ss_pred CceEEEEEeeCCCCCHHHHHHHHHHHHhCCcCEEEeecCHHHhccCC--CCCCCHHHHHHHHHHcCCCCEEEecCCCCCH
Confidence 36789999999999999999999999999999999999999888887 4999999999999999999999999888788
Q ss_pred HHHHhhcCccEEEecCCcCCCCCCCCCCChHHHHHhCCeEEEeCCCCCCCHHHHHHHHHhch
Q 014503 335 KDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIANH 396 (423)
Q Consensus 335 ~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~i~~~~~~Stt~Ii~RI~~~~ 396 (423)
.+++++++||++|+|+||... ..+.+.|...+.+|+++++++++++|||+|++||+...
T Consensus 84 ~efi~~~~~d~vV~G~D~~~g---~~~~~~~~~~k~~G~~~~~~~t~g~STT~ii~ri~~~~ 142 (341)
T 3elb_A 84 LETLDKYNCDFCVHGNDITLT---VDGRDTYEEVKQAGRYRECKRTQGVSTTDLVGRMLLVT 142 (341)
T ss_dssp HHHHHHTTCSEEEECSCCCBC---TTSCBTTHHHHHTTCEEECCCCTTCCHHHHHHHHHC--
T ss_pred HHHHHHhCCCEEEECCCCCCC---CCCcchHHHHHhCCEEEEeCCCCCCCHHHHHHHHHHhc
Confidence 999999999999999999765 34567888888999999999999999999999998743
No 5
>2b7l_A Glycerol-3-phosphate cytidylyltransferase; rossmann fold; 3.00A {Staphylococcus aureus}
Probab=99.89 E-value=2.4e-23 Score=180.70 Aligned_cols=129 Identities=29% Similarity=0.454 Sum_probs=95.2
Q ss_pred CeEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhcCccccEEEecCCccccHHH
Q 014503 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQF 144 (423)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~~VD~vi~~~p~~~~~ef 144 (423)
+++++++|+|||+|.||+.+|++|+++++.++|++++++.....+.+|+++.+||++++++++++|.++...+|. +|
T Consensus 1 m~~~~~~G~FDp~H~GH~~li~~a~~~~~~~~v~v~~~~~~~~~~~~~l~~~~eR~~~l~~~~~~d~v~~~~~~~---~~ 77 (132)
T 2b7l_A 1 MKRVITYGTYDLLHYGHIELLRRAREMGDYLIVALSTDEFNQIKHKKSYYDYEQRKMMLESIRYVDLVIPEKGWG---QK 77 (132)
T ss_dssp CCEEEEEECCCSCCHHHHHHHHHHHHTSSEEEEEEECHHHHHHTTCCCSSCHHHHHHHHHTBTTCCEEEEECCGG---GH
T ss_pred CeEEEEeeecCcCCHHHHHHHHHHHHhCCcEEEEEECCHHHhccCCCCCCCHHHHHHHHHhcCCCCEEEECCChH---HH
Confidence 358999999999999999999999999999999999988542222268999999999999998899998855553 56
Q ss_pred HHHHHhhcCccEEEEcCCCCCCCCCCcHHHHHHhCCcEEEeccCCCCCHHHHHHHHHhc
Q 014503 145 MNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSS 203 (423)
Q Consensus 145 l~~ll~~~~~d~VV~G~D~~~g~~g~~~~~~lk~~g~~~~v~r~~~iSST~Ir~rI~~~ 203 (423)
++. +++++|+++|+|+||.. .++.++..+++..+++...||||.||++|.++
T Consensus 78 ~~~-~~~~~~~~iv~G~D~~~------~~~~L~~~~~v~~i~~~~~iSST~IR~~i~~g 129 (132)
T 2b7l_A 78 EDD-VEKFDVDVFVMGHDWEG------EFDFLKDKCEVIYLKRTEGISTTKIKQELYGK 129 (132)
T ss_dssp HHH-HHHTTCCEEEECGGGTT------TTGGGTTTSEEEECSSCC--------------
T ss_pred HHH-HHHcCCCEEEECCCCcC------cHHHHHhCCEEEEECCCCCcCHHHHHHHHHhc
Confidence 665 57789999999999932 34467778899999998889999999999865
No 6
>1coz_A Protein (glycerol-3-phosphate cytidylyltransferase); HET: CTP; 2.00A {Bacillus subtilis} SCOP: c.26.1.2 PDB: 1n1d_A*
Probab=99.89 E-value=3.9e-23 Score=178.61 Aligned_cols=128 Identities=34% Similarity=0.495 Sum_probs=105.2
Q ss_pred CeEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhcCccccEEEecCCccccHHH
Q 014503 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQF 144 (423)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~~VD~vi~~~p~~~~~ef 144 (423)
+++++++|+|||+|.||+.++++|++.+++++|++++++.......+++++.+||++++++++++|.++...++. +|
T Consensus 1 m~~~~~~G~FDp~H~GH~~li~~a~~~~d~~~v~v~~~~~~~~~~~~~l~~~~eR~~~l~~~~~~d~v~~~~~~~---~~ 77 (129)
T 1coz_A 1 MKKVITYGTFDLLHWGHIKLLERAKQLGDYLVVAISTDEFNLQKQKKAYHSYEHRKLILETIRYVDEVIPEKNWE---QK 77 (129)
T ss_dssp CCEEEEEECCCSCCHHHHHHHHHHHTTSSEEEEEEECHHHHHHHTCCCSSCHHHHHHHHTTBTTCCEEEEECCST---TH
T ss_pred CcEEEEEEeCCCCCHHHHHHHHHHHHhCCCeEEEEECCHHHhcCCCCCCCCHHHHHHHHHhcCCCCEEEeCCCHH---HH
Confidence 357999999999999999999999999999999999987322112268999999999999998899988766654 56
Q ss_pred HHHHHhhcCccEEEEcCCCCCCCCCCcHHHHHHhCCcEEEeccCCCCCHHHHHHHHHh
Q 014503 145 MNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILS 202 (423)
Q Consensus 145 l~~ll~~~~~d~VV~G~D~~~g~~g~~~~~~lk~~g~~~~v~r~~~iSST~Ir~rI~~ 202 (423)
++. +++++++++|+|+||. +.++.+++.+++..+++...||||.||++|.+
T Consensus 78 ~~~-l~~~~~~~iv~G~D~~------~~~~~L~~~~~v~~~~~~~~iSST~IR~~i~~ 128 (129)
T 1coz_A 78 KQD-IIDHNIDVFVMGDDWE------GKFDFLKDQCEVVYLPRTEGISTTKIKEEIAG 128 (129)
T ss_dssp HHH-HHHTTCSEEEEEGGGT------TTTGGGTTTSEEEEECCCTTCCHHHHHHTC--
T ss_pred HHH-HHHhCCcEEEECCCCC------CcHHHHHhCCeEEEcCCCCCcCHHHHHHHHHh
Confidence 655 4678999999999983 23446777889999999889999999998753
No 7
>3glv_A Lipopolysaccharide core biosynthesis protein; structural GEN PSI, MCSG, protein structure initiative; HET: AMP; 1.99A {Thermoplasma volcanium GSS1}
Probab=99.87 E-value=3.9e-22 Score=176.11 Aligned_cols=134 Identities=33% Similarity=0.434 Sum_probs=88.7
Q ss_pred CeEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhcCccccEEEecCCccccHHH
Q 014503 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQF 144 (423)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~~VD~vi~~~p~~~~~ef 144 (423)
+++++++|+|||+|.||+.+|++|+++++.++|++++++.....+.++++|.+||+++++++++||.++...|. +|
T Consensus 2 m~~v~~~G~FD~vH~GH~~li~~a~~~~~~~~v~v~~~~~~~~~~~~~l~~~~eR~~~l~~~~~vd~v~~~~~~----~f 77 (143)
T 3glv_A 2 MIRVMATGVFDILHLGHIHYLKESKKLGDELVVVVARDSTARNNGKIPIFDENSRLALISELKVVDRAILGHEG----DM 77 (143)
T ss_dssp CCEEEEEECCSSCCHHHHHHHHHHHTTSSEEEEEECCHHHHHHTTCCCSSCHHHHHHHHTTBTTCSEEEECCTT----CH
T ss_pred ceEEEEEeecCCCCHHHHHHHHHHHHhCCCcEEEEECCcchhhcCCCCCCCHHHHHHHHHhcCCCCEEEEcCch----hH
Confidence 57899999999999999999999999999999999998865432337899999999999999889999986443 36
Q ss_pred HHHHHhhcCccEEEEcCCCCCCCCCCcHHHHHHhCC-cE--EEecc--CCCCCHHHHHHHHHhccc
Q 014503 145 MNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVG-RY--KQIKR--TEGVSSTDIVGRILSSME 205 (423)
Q Consensus 145 l~~ll~~~~~d~VV~G~D~~~g~~g~~~~~~lk~~g-~~--~~v~r--~~~iSST~Ir~rI~~~~~ 205 (423)
++ ++++++++++|+|+||+|+.. ......++.| .+ ..... ...||||.||++|.+..+
T Consensus 78 ~~-~~~~l~~~~iv~G~d~~f~~~--~l~~~~~~~g~~v~vv~~~~~~~~~iSST~IR~~i~~~~~ 140 (143)
T 3glv_A 78 MK-TVIEVKPDIITLGYDQKFDEA--ELQSKINKLGITVKIVRISKYDGQLNSSSSVRKKIMELIG 140 (143)
T ss_dssp HH-HHHHHCCSEEEECTTCHHHHH--HHHHHHHHHTCCCEEEECCCCC------------------
T ss_pred HH-HHHhcCCCEEEECCCCCCCHH--HHHHHHHHcCCeEEEEEeeccCCCcCCHHHHHHHHHHHhc
Confidence 64 567899999999999988421 1122223233 22 23222 245999999999987654
No 8
>3op1_A Macrolide-efflux protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PEG; 2.49A {Streptococcus pneumoniae}
Probab=99.84 E-value=6.8e-21 Score=187.83 Aligned_cols=136 Identities=21% Similarity=0.213 Sum_probs=109.4
Q ss_pred CeEEEEecccCcCcHHHHHHHHHHHHhcCee---EEEEecch--hh-hcc---CC-CCCCcHHHHHHHHhcCccccEEEe
Q 014503 65 RVRVYMDGCFDLMHYGHANALRQAKALGDEL---VVGVVSDE--EI-IAN---KG-PPVLSMEERLALVSGLKWVDEVIA 134 (423)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~L---iVgV~sd~--~i-~~~---K~-~pi~t~eER~~~l~~~~~VD~vi~ 134 (423)
...|+++|+|||+|.||+.+|++|++.|+.+ .+.++.|+ .. ... +. ++++|.+||.++++++ +||.++.
T Consensus 20 ~~~vvtiG~FDGvH~GHq~li~~a~~~a~~~~~~~vV~TFdphP~~v~~~~~~~~~~~Lt~~~eK~~ll~~l-GVD~v~~ 98 (308)
T 3op1_A 20 SDSVVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNESPKIALEPYHPDLFLHILNPAERERKLKRE-GVEELYL 98 (308)
T ss_dssp SCEEEEESCCSSCCHHHHHHHHHHHHHSSTTCCCEEEEEESSCTHHHHSCCCGGGGCBSSCHHHHHHHHHHH-TCCEEEE
T ss_pred CCeEEEEecCCcccHHHHHHHHHHHHHHHhcCCceEEEEecCCHHHHhCccccCCcccCCCHHHHHHHHHHc-CCCEEEE
Confidence 4589999999999999999999999998542 34444444 32 211 12 5799999999999998 6999987
Q ss_pred cCCcc-----cc-HHHHHHHHhhcCccEEEEcCCCCCCCCCCcHHHHHHhCCc--EEEecc----CCCCCHHHHHHHHHh
Q 014503 135 NAPYA-----IT-EQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGR--YKQIKR----TEGVSSTDIVGRILS 202 (423)
Q Consensus 135 ~~p~~-----~~-~efl~~ll~~~~~d~VV~G~D~~~g~~g~~~~~~lk~~g~--~~~v~r----~~~iSST~Ir~rI~~ 202 (423)
.||+ ++ ++|+++++.+++++.+|+|+||+||. +.++.+.|++.|+ +..++. ...||||.||+.|.+
T Consensus 99 -~~F~~~~a~ls~e~Fv~~ll~~l~~~~ivvG~DfrFG~-r~G~~~~L~~~~~~~V~~v~~~~~~~~~ISST~IR~~L~~ 176 (308)
T 3op1_A 99 -LDFSSQFASLTAQEFFATYIKAMNAKIIVAGFDYTFGS-DKKTAEDLKNYFDGEVIIVPPVEDEKGKISSTRIRQAILD 176 (308)
T ss_dssp -ECCCHHHHTCCHHHHHHHHHHHHTEEEEEEETTCCBTT-TTBCSTTHHHHCSSEEEEECCCBCSSCBCCHHHHHHHHHH
T ss_pred -ecCCHHHHcCCHHHHHHHHHHHcCCCEEEECcCCCCCC-cCCCHHHHHHhCCCCEEEeCCEecCCceEeHHHHHHHHHc
Confidence 5664 22 58998888899999999999999999 9999899998875 666665 235999999999987
Q ss_pred c
Q 014503 203 S 203 (423)
Q Consensus 203 ~ 203 (423)
+
T Consensus 177 G 177 (308)
T 3op1_A 177 G 177 (308)
T ss_dssp T
T ss_pred C
Confidence 6
No 9
>1coz_A Protein (glycerol-3-phosphate cytidylyltransferase); HET: CTP; 2.00A {Bacillus subtilis} SCOP: c.26.1.2 PDB: 1n1d_A*
Probab=99.83 E-value=2.1e-20 Score=161.32 Aligned_cols=127 Identities=34% Similarity=0.489 Sum_probs=106.7
Q ss_pred CeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhhcccCeeEEcCCCCchH
Q 014503 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTK 335 (423)
Q Consensus 256 ~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~~~Vd~Vvi~~p~~~~~ 335 (423)
++++++.|+||++|.||+.++++|++.+|.++|+++.|+... .|++ .|+++.+||+.++++|++||.|++..++..+.
T Consensus 1 m~~~~~~G~FDp~H~GH~~li~~a~~~~d~~~v~v~~~~~~~-~~~~-~~l~~~~eR~~~l~~~~~~d~v~~~~~~~~~~ 78 (129)
T 1coz_A 1 MKKVITYGTFDLLHWGHIKLLERAKQLGDYLVVAISTDEFNL-QKQK-KAYHSYEHRKLILETIRYVDEVIPEKNWEQKK 78 (129)
T ss_dssp CCEEEEEECCCSCCHHHHHHHHHHHTTSSEEEEEEECHHHHH-HHTC-CCSSCHHHHHHHHTTBTTCCEEEEECCSTTHH
T ss_pred CcEEEEEEeCCCCCHHHHHHHHHHHHhCCCeEEEEECCHHHh-cCCC-CCCCCHHHHHHHHHhcCCCCEEEeCCCHHHHH
Confidence 368999999999999999999999999999999999997322 3554 68999999999999999999999876666666
Q ss_pred HHHhhcCccEEEecCCcCCCCCCCCCCChHHHHHhCCeEEEeCCCCCCCHHHHHHHHH
Q 014503 336 DMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRII 393 (423)
Q Consensus 336 ~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~i~~~~~~Stt~Ii~RI~ 393 (423)
+.++++++++++.|.||..+ + ...+..|.+..+++...+|||.|.++|.
T Consensus 79 ~~l~~~~~~~iv~G~D~~~~-~--------~~L~~~~~v~~~~~~~~iSST~IR~~i~ 127 (129)
T 1coz_A 79 QDIIDHNIDVFVMGDDWEGK-F--------DFLKDQCEVVYLPRTEGISTTKIKEEIA 127 (129)
T ss_dssp HHHHHTTCSEEEEEGGGTTT-T--------GGGTTTSEEEEECCCTTCCHHHHHHTC-
T ss_pred HHHHHhCCcEEEECCCCCCc-H--------HHHHhCCeEEEcCCCCCcCHHHHHHHHH
Confidence 77889999999999998532 1 1245578899999999999999998764
No 10
>2b7l_A Glycerol-3-phosphate cytidylyltransferase; rossmann fold; 3.00A {Staphylococcus aureus}
Probab=99.83 E-value=3e-20 Score=161.15 Aligned_cols=129 Identities=28% Similarity=0.487 Sum_probs=96.5
Q ss_pred CeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhhcccCeeEEcCCCCchH
Q 014503 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTK 335 (423)
Q Consensus 256 ~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~~~Vd~Vvi~~p~~~~~ 335 (423)
++++++.|+||++|.||+.+|++|++++|.++|+++.|+... .+++ .|+++.+||+.++++|++||.|++..++..+.
T Consensus 1 m~~~~~~G~FDp~H~GH~~li~~a~~~~~~~~v~v~~~~~~~-~~~~-~~l~~~~eR~~~l~~~~~~d~v~~~~~~~~~~ 78 (132)
T 2b7l_A 1 MKRVITYGTYDLLHYGHIELLRRAREMGDYLIVALSTDEFNQ-IKHK-KSYYDYEQRKMMLESIRYVDLVIPEKGWGQKE 78 (132)
T ss_dssp CCEEEEEECCCSCCHHHHHHHHHHHHTSSEEEEEEECHHHHH-HTTC-CCSSCHHHHHHHHHTBTTCCEEEEECCGGGHH
T ss_pred CeEEEEeeecCcCCHHHHHHHHHHHHhCCcEEEEEECCHHHh-ccCC-CCCCCHHHHHHHHHhcCCCCEEEECCChHHHH
Confidence 368999999999999999999999999999999999997442 3454 68999999999999999999999866555566
Q ss_pred HHHhhcCccEEEecCCcCCCCCCCCCCChHHHHHhCCeEEEeCCCCCCCHHHHHHHHHhc
Q 014503 336 DMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIAN 395 (423)
Q Consensus 336 ~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~i~~~~~~Stt~Ii~RI~~~ 395 (423)
+.+++++|+++|.|.|+..+. ...+..|.+..++....+|||.|.++|.+.
T Consensus 79 ~~~~~~~~~~iv~G~D~~~~~---------~~L~~~~~v~~i~~~~~iSST~IR~~i~~g 129 (132)
T 2b7l_A 79 DDVEKFDVDVFVMGHDWEGEF---------DFLKDKCEVIYLKRTEGISTTKIKQELYGK 129 (132)
T ss_dssp HHHHHTTCCEEEECGGGTTTT---------GGGTTTSEEEECSSCC--------------
T ss_pred HHHHHcCCCEEEECCCCcCcH---------HHHHhCCEEEEECCCCCcCHHHHHHHHHhc
Confidence 778899999999999984421 124567889999998899999999988654
No 11
>1mrz_A Riboflavin kinase/FMN adenylyltransferase; rossmann fold, flavin binding domain, 6-stranded beta barrel nucleotide binding domain; HET: CIT; 1.90A {Thermotoga maritima} SCOP: b.43.5.1 c.26.1.3 PDB: 1s4m_A* 1t6x_A* 1t6y_A* 1t6z_A* 2i1l_A
Probab=99.79 E-value=2.6e-19 Score=175.81 Aligned_cols=130 Identities=22% Similarity=0.294 Sum_probs=101.1
Q ss_pred EEEecccCcCcHHHHHHHHHHHHhcCe-----eEEEEecchhhhcc-CCCCCCcHHHHHHHHhcCccccEEEecCCc---
Q 014503 68 VYMDGCFDLMHYGHANALRQAKALGDE-----LVVGVVSDEEIIAN-KGPPVLSMEERLALVSGLKWVDEVIANAPY--- 138 (423)
Q Consensus 68 V~~~G~FD~lH~GH~~lL~qA~~~~d~-----LiVgV~sd~~i~~~-K~~pi~t~eER~~~l~~~~~VD~vi~~~p~--- 138 (423)
|+++|+||++|.||+++|++|+++|+. +++.+.+++.+... +.+++++.+||+++++++. ++.++. |
T Consensus 2 vvtiG~FDgvH~GH~~ll~~a~~~a~~~~~~~vVvtFdphP~~l~~~~~~~l~~~~eR~~ll~~lg-~~~v~~---F~~~ 77 (293)
T 1mrz_A 2 VVSIGVFDGVHIGHQKVLRTMKEIAFFRKDDSLIYTISYPPEYFLPDFPGLLMTVESRVEMLSRYA-RTVVLD---FFRI 77 (293)
T ss_dssp CEEEECCTTCCHHHHHHHHHHHHHHHHHTCCCEEEEESSCGGGGSTTCCCBSSCHHHHHHHHTTTS-CEEEEC---HHHH
T ss_pred EEEEeeCccccHHHHHHHHHHHHHHHHcCCeEEEEEecCCHHHhCCCCCCCCCCHHHHHHHHHhCC-CEEEEE---hHHh
Confidence 789999999999999999999999854 34444444433222 2367999999999999986 555544 4
Q ss_pred --cccHHHHHHHHhhcCccEEEEcCCCCCCCCCCcHHHHHHhCC-cEEEeccC----CCCCHHHHHHHHHhc
Q 014503 139 --AITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVG-RYKQIKRT----EGVSSTDIVGRILSS 203 (423)
Q Consensus 139 --~~~~efl~~ll~~~~~d~VV~G~D~~~g~~g~~~~~~lk~~g-~~~~v~r~----~~iSST~Ir~rI~~~ 203 (423)
...++|+++++ ++++++|+|+||+||.++.++.+.|++.| ++..++.. ..||||.||+.|.++
T Consensus 78 a~ls~~~Fi~~il--l~~~~iVvG~Df~fG~~~~g~~~~L~~~G~~V~~v~~~~~~~~~iSST~IR~~L~~G 147 (293)
T 1mrz_A 78 KDLTPEGFVERYL--SGVSAVVVGRDFRFGKNASGNASFLRKKGVEVYEIEDVVVQGKRVSSSLIRNLVQEG 147 (293)
T ss_dssp TTCCHHHHHHHHC--TTCCEEEEETTCCBSGGGCBCHHHHHHTTCEEEEECCCEETTEECCHHHHHHHHHTT
T ss_pred hcCCHHHHHHHHh--cCCCEEEECCCCCCCCCCCCCHHHHHhCCCEEEEECCEEeCCccccHhHHHHHHhcC
Confidence 12258888766 89999999999999999888888888754 67777753 469999999999876
No 12
>3glv_A Lipopolysaccharide core biosynthesis protein; structural GEN PSI, MCSG, protein structure initiative; HET: AMP; 1.99A {Thermoplasma volcanium GSS1}
Probab=99.79 E-value=1.7e-19 Score=159.21 Aligned_cols=133 Identities=22% Similarity=0.354 Sum_probs=91.7
Q ss_pred CeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhhcccCeeEEcCCCCchH
Q 014503 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTK 335 (423)
Q Consensus 256 ~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~~~Vd~Vvi~~p~~~~~ 335 (423)
++++++.|+||++|.||+.+|++|++++|.++|+|+.|+.+.+ |++ +|+++.+||+.++++|++||.|++.+|.+ ..
T Consensus 2 m~~v~~~G~FD~vH~GH~~li~~a~~~~~~~~v~v~~~~~~~~-~~~-~~l~~~~eR~~~l~~~~~vd~v~~~~~~~-f~ 78 (143)
T 3glv_A 2 MIRVMATGVFDILHLGHIHYLKESKKLGDELVVVVARDSTARN-NGK-IPIFDENSRLALISELKVVDRAILGHEGD-MM 78 (143)
T ss_dssp CCEEEEEECCSSCCHHHHHHHHHHHTTSSEEEEEECCHHHHHH-TTC-CCSSCHHHHHHHHTTBTTCSEEEECCTTC-HH
T ss_pred ceEEEEEeecCCCCHHHHHHHHHHHHhCCCcEEEEECCcchhh-cCC-CCCCCHHHHHHHHHhcCCCCEEEEcCchh-HH
Confidence 6889999999999999999999999999999999999988765 544 79999999999999999999999988776 45
Q ss_pred HHHhhcCccEEEecCCcCCCCCCCCCCChHHHHHhCCe---EEEeCC--CCCCCHHHHHHHHHhch
Q 014503 336 DMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGI---FQLLES--PKSITTTSVAQRIIANH 396 (423)
Q Consensus 336 ~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~---~~~i~~--~~~~Stt~Ii~RI~~~~ 396 (423)
+++++++++++|+|.|+..+ ..+.....+..|. .+.... ...+|||.|.+.|.+.+
T Consensus 79 ~~~~~l~~~~iv~G~d~~f~-----~~~l~~~~~~~g~~v~vv~~~~~~~~~iSST~IR~~i~~~~ 139 (143)
T 3glv_A 79 KTVIEVKPDIITLGYDQKFD-----EAELQSKINKLGITVKIVRISKYDGQLNSSSSVRKKIMELI 139 (143)
T ss_dssp HHHHHHCCSEEEECTTCHHH-----HHHHHHHHHHHTCCCEEEECCCCC-----------------
T ss_pred HHHHhcCCCEEEECCCCCCC-----HHHHHHHHHHcCCeEEEEEeeccCCCcCCHHHHHHHHHHHh
Confidence 68999999999999986321 1112222333442 222222 35699999999987654
No 13
>2x0k_A Riboflavin biosynthesis protein RIBF; riboflavin kinase, nucleotide-binding, transferase, ATP-BIND multifunctional enzyme; 1.95A {Corynebacterium ammoniagenes}
Probab=99.78 E-value=2.7e-19 Score=179.03 Aligned_cols=137 Identities=16% Similarity=0.228 Sum_probs=108.2
Q ss_pred CeEEEEecccCcCcHHHHHHHHHHHHhcCe---eEEEEecchh---hh-ccC-CCCCCcHHHHHHHHhcCccccEEEecC
Q 014503 65 RVRVYMDGCFDLMHYGHANALRQAKALGDE---LVVGVVSDEE---II-ANK-GPPVLSMEERLALVSGLKWVDEVIANA 136 (423)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~---LiVgV~sd~~---i~-~~K-~~pi~t~eER~~~l~~~~~VD~vi~~~ 136 (423)
.+.|+++|+|||+|.||+.+|++|++.++. ..++++.|+. +. +.+ .+++++.+||+++++++ +||.++. .
T Consensus 15 ~~~vvtiG~FDGvH~GHq~Li~~a~~~a~~~~~~~vvvtFdphP~~v~~~~~~~~~L~~~~eR~~ll~~~-gVD~v~v-~ 92 (338)
T 2x0k_A 15 DNSAVTIGVFDGVHRGHQKLINATVEKAREVGAKAIMVTFDPHPVSVFLPRRAPLGITTLAERFALAESF-GIDGVLV-I 92 (338)
T ss_dssp CCEEEEESCCTTCCHHHHHHHHHHHHHHHHHTCEEEEEEESSCHHHHHSTTCSCCBSSCHHHHHHHHHHT-TCSEEEE-E
T ss_pred CCeEEEEEeCCcccHHHHHHHHHHHHHHHHcCCcEEEEEecCCHHHHcCCccCCCCCCCHHHHHHHHHhc-CCCEEEE-c
Confidence 348999999999999999999999998854 3566666652 22 222 25699999999999998 6999987 4
Q ss_pred Ccc-----cc-HHHHHH-HHhhcCccEEEEcCCCCCCCCCCcHHHHHHhCC----cEEEeccC----CCCCHHHHHHHHH
Q 014503 137 PYA-----IT-EQFMNR-LFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVG----RYKQIKRT----EGVSSTDIVGRIL 201 (423)
Q Consensus 137 p~~-----~~-~efl~~-ll~~~~~d~VV~G~D~~~g~~g~~~~~~lk~~g----~~~~v~r~----~~iSST~Ir~rI~ 201 (423)
||+ ++ ++|+++ ++++++++++|+|+||+||.++.++.+.|++.+ ++..++.. ..||||.||+.|.
T Consensus 93 ~F~~~~a~ls~e~Fi~~il~~~l~~~~ivvG~Df~FG~~r~g~~~~L~~~~~~g~~V~~v~~~~~~~~~ISST~IR~~L~ 172 (338)
T 2x0k_A 93 DFTRELSGTSPEKYVEFLLEDTLHASHVVVGANFTFGENAAGTADSLRQICQSRLTVDVIDLLDDEGVRISSTTVREFLS 172 (338)
T ss_dssp CTTTSSSSCCHHHHHHHCCCCCTCEEEEEEETTCEESGGGCEEHHHHHHHTTTTSEEEEECCCEETTEECSHHHHHHHHH
T ss_pred cccHHHHhCCHHHHHHHHHHhhcCCCEEEEeecCCCCCCCCCCHHHHHHHhcCCeEEEEECcEecCCcccccchHHHHHh
Confidence 552 22 589988 456799999999999999999998888888765 45666652 3599999999998
Q ss_pred hc
Q 014503 202 SS 203 (423)
Q Consensus 202 ~~ 203 (423)
++
T Consensus 173 ~G 174 (338)
T 2x0k_A 173 EG 174 (338)
T ss_dssp TT
T ss_pred cC
Confidence 76
No 14
>3nv7_A Phosphopantetheine adenylyltransferase; helicobacter pylori 26695 strain, mutant I4V/N76Y, phosphopa adenylyltransferase; 1.75A {Helicobacter pylori} PDB: 3otw_A*
Probab=99.74 E-value=1.5e-18 Score=155.60 Aligned_cols=127 Identities=19% Similarity=0.221 Sum_probs=97.0
Q ss_pred CeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHh-hcccCeeEEcCCCCch
Q 014503 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA-CRYVDEVIIGAPWEVT 334 (423)
Q Consensus 256 ~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~-~~~Vd~Vvi~~p~~~~ 334 (423)
+++++++|+|||+|.||++++++|++++|+|+|++++|. .| +|+++.+||+.+++. ++.+|.|.+....+++
T Consensus 2 m~i~i~~GsFDPiH~GHl~ii~~A~~~~D~viv~v~~~~----~K---~~~~~~~eR~~ml~~a~~~~~~v~v~~~~~l~ 74 (157)
T 3nv7_A 2 QKVGIYPGTFDPVTNGHIDIIHRSSELFEKLIVAVAHSS----AK---NPMFSLDERLKMIQLATKSFKNVECVAFEGLL 74 (157)
T ss_dssp -CEEEEEECCTTCCHHHHHHHHHHHTTSSEEEEEEECCG----GG---CCSSCHHHHHHHHHHHHTTSTTEEEEEECSCH
T ss_pred CEEEEEEEEcCCCCHHHHHHHHHHHHhCCceEEEEccCC----CC---CCCCCHHHHHHHHHHHhcCCCcEEEEecCchH
Confidence 478999999999999999999999999999999999885 34 589999999999987 7899998876555678
Q ss_pred HHHHhhcCccEEEec----CCcCCCCCCCCCCChHHHHHhCC---eEEEeCCCC---CCCHHHHHHHHHhc
Q 014503 335 KDMITTFNICLVVHG----TVSETNTPLTGQSDPYEVAKSMG---IFQLLESPK---SITTTSVAQRIIAN 395 (423)
Q Consensus 335 ~~~i~~~~~d~vv~G----~d~~~~~~~~~~~d~~~~~k~~G---~~~~i~~~~---~~Stt~Ii~RI~~~ 395 (423)
.+++++++||++|+| +||+.. .+.....+..+ ..++++..+ .+|||.|.+.+...
T Consensus 75 ~~~~~~~~~~~ivrG~r~~~D~~ye------~~~a~~n~~l~~~ietv~l~~~~~~~~iSSt~vRe~~~~g 139 (157)
T 3nv7_A 75 AYLAKEYHCKVLVRGLRVVSDFEYE------LQMGYANKSLNHELETLYFMPTLQNAFISSSIVRSIIAHK 139 (157)
T ss_dssp HHHHHHTTCCCBCCCCSCCCCHHHH------HHHHHHHHHSSCCCCCCCCCCCHHHHTCCHHHHHHHHHTT
T ss_pred HHHHHHcCCCEEEECCcccchhhhh------HHHHHHHHHhCCCceEEEEcCCcccceeeHHHHHHHHHcC
Confidence 899999999999999 554321 11111122322 233444443 79999888876543
No 15
>3k9w_A Phosphopantetheine adenylyltransferase; niaid, ssgcid, seattle structural genomics center for infect disease, coenzyme A, COA; HET: 4PS ADE PG4; 1.60A {Burkholderia pseudomallei} PDB: 3ikz_A* 3pxu_A*
Probab=99.71 E-value=1.2e-17 Score=153.99 Aligned_cols=129 Identities=22% Similarity=0.259 Sum_probs=93.5
Q ss_pred CeEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhc-CccccEEEecCCcc-ccH
Q 014503 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKWVDEVIANAPYA-ITE 142 (423)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~-~~~VD~vi~~~p~~-~~~ 142 (423)
++++++.|+|||+|.||+.++++|++++|+++|+|.+++ .| +|+++.+||+++++. ++++|.+.. .+|+ ++.
T Consensus 22 mki~v~~GsFDpiH~GHl~li~~A~~~~d~viv~v~~~p----~K-~~l~s~eeR~~ml~~~~~~v~~v~v-~~f~~~~~ 95 (187)
T 3k9w_A 22 MVVAVYPGTFDPLTRGHEDLVRRASSIFDTLVVGVADSR----AK-KPFFSLEERLKIANEVLGHYPNVKV-MGFTGLLK 95 (187)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHHHSSEEEEEEECCG----GG-CCSSCHHHHHHHHHHHHTTCTTEEE-EEESSCHH
T ss_pred cEEEEEEEeCCcCcHHHHHHHHHHHHHCCcEEEEEecCC----cc-CCCCCHHHHHHHHHHHhccCCcEEE-EechhhHH
Confidence 679999999999999999999999999999999999864 33 589999999999998 578998876 3342 334
Q ss_pred HHHHHHHhhcCccEEEEc----CCCCCCCCCCcHHHHHHhCCcEEEeccC---CCCCHHHHHHHHHhc
Q 014503 143 QFMNRLFNEHKIDYIIHG----DDPCLLPDGTDAYALAKKVGRYKQIKRT---EGVSSTDIVGRILSS 203 (423)
Q Consensus 143 efl~~ll~~~~~d~VV~G----~D~~~g~~g~~~~~~lk~~g~~~~v~r~---~~iSST~Ir~rI~~~ 203 (423)
+| +++++++++|+| .||.+...-......+....+.+.+... ..||||.||+++..+
T Consensus 96 d~----l~~l~~~~iv~G~r~~~Df~~E~~la~~nr~l~~~ietv~l~~~~~~~~ISST~IRe~~~~g 159 (187)
T 3k9w_A 96 DF----VRANDARVIVRGLRAVSDFEYEFQMAGMNRYLLPDVETMFMTPSDQYQFISGTIVREIAQLG 159 (187)
T ss_dssp HH----HHHTTCSEEEEECCTTSCHHHHHHHHHHHHHHCTTCEEEEECCCGGGTTCCHHHHHHHHHTT
T ss_pred HH----HHHcCCCEEEECCCcccccchHHHHHHHHHHhCCCCcEEEEecccccccccHHHHHHHHHcC
Confidence 44 457899999999 6664211000000011112234444443 369999999999865
No 16
>4f3r_A Phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltranferase; 2.25A {Coxiella burnetii}
Probab=99.70 E-value=1.7e-17 Score=149.54 Aligned_cols=128 Identities=16% Similarity=0.203 Sum_probs=93.0
Q ss_pred CeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhhcccCeeEEcCCCCchH
Q 014503 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTK 335 (423)
Q Consensus 256 ~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~~~Vd~Vvi~~p~~~~~ 335 (423)
+++++++|+|||+|.||++++++|++++|+|+|++++|. .| +|+++.+||+.+++.+...|.|.+......+.
T Consensus 5 m~i~i~~GsFDPiH~GHl~li~~A~~~~d~viv~v~~~~----~K---~~~~~~~~R~~m~~~~~~~~~v~V~~~~~l~~ 77 (162)
T 4f3r_A 5 KPIAIYPGTFDPLTNGHVDIIERALPLFNKIIVACAPTS----RK---DPHLKLEERVNLIADVLTDERVEVLPLTGLLV 77 (162)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHGGGCSEEEEEECCC-------------CCHHHHHHHHHHHCCCTTEEEEECCSCHH
T ss_pred eEEEEEEEEcCCCCHHHHHHHHHHHHHCCcEEEEEecCC----cc---CCCCCHHHHHHHHHHhhCCCCEEEEeccchHH
Confidence 589999999999999999999999999999999999874 34 58999999999998865559887766666888
Q ss_pred HHHhhcCccEEEec----CCcCCCCCCCCCCChHHHHHhC--C-eEEEeCCC---CCCCHHHHHHHHHhch
Q 014503 336 DMITTFNICLVVHG----TVSETNTPLTGQSDPYEVAKSM--G-IFQLLESP---KSITTTSVAQRIIANH 396 (423)
Q Consensus 336 ~~i~~~~~d~vv~G----~d~~~~~~~~~~~d~~~~~k~~--G-~~~~i~~~---~~~Stt~Ii~RI~~~~ 396 (423)
+++++++++++|+| .||+.. .......+.. + ..+++... ..+|||.|.+++....
T Consensus 78 ~~~~~~~~~~~v~G~r~~~Df~~e------~~~a~~nr~l~~~ietv~l~~~~~~~~ISST~IRe~~~~g~ 142 (162)
T 4f3r_A 78 DFAKTHQANFILRGLRAVSDFDYE------FQLAHMNYQLSPEIETIFLPAREGYSYVSGTMVREIVTLGG 142 (162)
T ss_dssp HHHHHTTCCEEEEEECSHHHHHHH------HHHHHHHHHHCTTCEEEEEECCGGGSSCCHHHHHHHHHTTC
T ss_pred HHHHHcCCCEEEECCCchhhhhhH------HHHHHHHHHhCCCccEEEEECCcccccccHHHHHHHHHcCC
Confidence 99999999999999 444221 0000111221 2 33444433 3799998888776543
No 17
>1qjc_A Phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.64A {Escherichia coli} SCOP: c.26.1.3 PDB: 1h1t_A* 1gn8_A* 1b6t_A* 3l92_A* 3l93_A
Probab=99.69 E-value=3.5e-17 Score=145.53 Aligned_cols=128 Identities=16% Similarity=0.230 Sum_probs=91.8
Q ss_pred eEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhc-CccccEEEecCCcc-ccHH
Q 014503 66 VRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKWVDEVIANAPYA-ITEQ 143 (423)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~-~~~VD~vi~~~p~~-~~~e 143 (423)
++++++|+|||+|.||+.++++|++.+|+++++++.++ .| +++++.++|++|++. +.++|.+.. .+|+ ++.+
T Consensus 2 ~i~i~~GsFDpvH~GH~~l~~~a~~~~d~v~v~~~~~p----~k-~~~~~~~~R~~ml~~a~~~~~~v~v-~~~~~~~~~ 75 (158)
T 1qjc_A 2 KRAIYPGTFDPITNGHIDIVTRATQMFDHVILAIAASP----SK-KPMFTLEERVALAQQATAHLGNVEV-VGFSDLMAN 75 (158)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHTTSSEEEEEEESCC----SS-CCSSCHHHHHHHHHHHTTTCTTEEE-EEECSCHHH
T ss_pred CEEEEEecCCCCCHHHHHHHHHHHHhCCEEEEEECCCC----CC-CCCCCHHHHHHHHHHHHhcCCCeEE-cccchHHHH
Confidence 57999999999999999999999999999999998864 34 478999999999995 678887765 2332 3333
Q ss_pred HHHHHHhhcCccEEEEcCCCCCCCCCCcHHHHH-HhCC----cEEEeccC--CCCCHHHHHHHHHhc
Q 014503 144 FMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALA-KKVG----RYKQIKRT--EGVSSTDIVGRILSS 203 (423)
Q Consensus 144 fl~~ll~~~~~d~VV~G~D~~~g~~g~~~~~~l-k~~g----~~~~v~r~--~~iSST~Ir~rI~~~ 203 (423)
++++++++++++|.|+.++.........+ +..+ .+..++.. ..||||.||++|.++
T Consensus 76 ----~l~~l~~~~~v~G~d~~~~~~~~~~~~~~~r~~~~~~~~i~~~~~~~~~~iSST~IR~~i~~g 138 (158)
T 1qjc_A 76 ----FARNQHATVLIRGLRAVADFEYEMQLAHMNRHLMPELESVFLMPSKEWSFISSSLVKEVARHQ 138 (158)
T ss_dssp ----HHHHTTCCEEEEECCTTCCHHHHHHHHHHHHHHCTTSEEEEECCCGGGTTCCHHHHHHHHHTT
T ss_pred ----HHHHcCCCEEEEeccchhhhHHHHHHHHhCccCCCCCCEEEEECCCCCCccCHHHHHHHHHcC
Confidence 44678899999999876543221111111 2221 22233222 359999999999866
No 18
>3k9w_A Phosphopantetheine adenylyltransferase; niaid, ssgcid, seattle structural genomics center for infect disease, coenzyme A, COA; HET: 4PS ADE PG4; 1.60A {Burkholderia pseudomallei} PDB: 3ikz_A* 3pxu_A*
Probab=99.68 E-value=1.3e-16 Score=146.87 Aligned_cols=132 Identities=17% Similarity=0.200 Sum_probs=98.7
Q ss_pred CeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHh-hcccCeeEEcCCCCch
Q 014503 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA-CRYVDEVIIGAPWEVT 334 (423)
Q Consensus 256 ~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~-~~~Vd~Vvi~~p~~~~ 334 (423)
++++++.|+||++|.||+.++++|++++|+|+|+|.+|. .| +|+++.+||+.+++. ++.+|.|.+.+..+.+
T Consensus 22 mki~v~~GsFDpiH~GHl~li~~A~~~~d~viv~v~~~p----~K---~~l~s~eeR~~ml~~~~~~v~~v~v~~f~~~~ 94 (187)
T 3k9w_A 22 MVVAVYPGTFDPLTRGHEDLVRRASSIFDTLVVGVADSR----AK---KPFFSLEERLKIANEVLGHYPNVKVMGFTGLL 94 (187)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHHHSSEEEEEEECCG----GG---CCSSCHHHHHHHHHHHHTTCTTEEEEEESSCH
T ss_pred cEEEEEEEeCCcCcHHHHHHHHHHHHHCCcEEEEEecCC----cc---CCCCCHHHHHHHHHHHhccCCcEEEEechhhH
Confidence 689999999999999999999999999999999999873 24 589999999999988 6899999886655678
Q ss_pred HHHHhhcCccEEEecCCcCCCCCCCCCCChHHHHHhC--C-eEEEeCCC---CCCCHHHHHHHHHhch
Q 014503 335 KDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSM--G-IFQLLESP---KSITTTSVAQRIIANH 396 (423)
Q Consensus 335 ~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~--G-~~~~i~~~---~~~Stt~Ii~RI~~~~ 396 (423)
.+++++++++++|+|.+...+ |..+ .......+.. + ..+++... ..+|||.|.+++....
T Consensus 95 ~d~l~~l~~~~iv~G~r~~~D-f~~E-~~la~~nr~l~~~ietv~l~~~~~~~~ISST~IRe~~~~g~ 160 (187)
T 3k9w_A 95 KDFVRANDARVIVRGLRAVSD-FEYE-FQMAGMNRYLLPDVETMFMTPSDQYQFISGTIVREIAQLGG 160 (187)
T ss_dssp HHHHHHTTCSEEEEECCTTSC-HHHH-HHHHHHHHHHCTTCEEEEECCCGGGTTCCHHHHHHHHHTTC
T ss_pred HHHHHHcCCCEEEECCCcccc-cchH-HHHHHHHHHhCCCCcEEEEecccccccccHHHHHHHHHcCC
Confidence 899999999999999442211 1000 0001111222 2 33445433 4799999998887644
No 19
>1o6b_A Phosphopantetheine adenylyltransferase; structural genomics; HET: ADP; 2.20A {Bacillus subtilis} SCOP: c.26.1.3
Probab=99.68 E-value=6.7e-17 Score=145.75 Aligned_cols=129 Identities=16% Similarity=0.152 Sum_probs=91.7
Q ss_pred eEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhc-CccccEEEecCCccccHHH
Q 014503 66 VRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKWVDEVIANAPYAITEQF 144 (423)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~-~~~VD~vi~~~p~~~~~ef 144 (423)
++++++|+|||+|.||+.++++|++.+|+++|.+..++ .| +++++.+||++|++. +..+|.+.. .+++ +|
T Consensus 3 ~i~i~~GsFDpvH~GH~~li~~a~~~~d~v~v~~~~~p----~k-~~l~~~~~R~~ml~~a~~~~~~v~v-~~~e---~~ 73 (169)
T 1o6b_A 3 SIAVCPGSFDPVTYGHLDIIKRGAHIFEQVYVCVLNNS----SK-KPLFSVEERCELLREVTKDIPNITV-ETSQ---GL 73 (169)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHHHSSEEEEEECCCC----SS-CCSSCHHHHHHHHHHHHTTCTTEEE-EECS---SC
T ss_pred cEEEEEEeeCCCCHHHHHHHHHHHHhCCEEEEEECCCC----cc-CCCCCHHHHHHHHHHHHhcCCCEEE-cccc---hH
Confidence 57999999999999999999999999999888777542 34 578999999999995 467777655 2332 23
Q ss_pred HHHHHhhcCccEEEEcCCCCCCCCCCcHHHHHHh----CCcEEEeccC---CCCCHHHHHHHHHhc
Q 014503 145 MNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKK----VGRYKQIKRT---EGVSSTDIVGRILSS 203 (423)
Q Consensus 145 l~~ll~~~~~d~VV~G~D~~~g~~g~~~~~~lk~----~g~~~~v~r~---~~iSST~Ir~rI~~~ 203 (423)
..+++++++++++++|.|+.++.........+.+ ..+...+... ..||||.||+++.++
T Consensus 74 ~~~~l~~l~~~~~i~G~d~~~~~~~~~~~~~~~r~~~~~~~~i~~~~~~~~~~ISST~IR~~l~~G 139 (169)
T 1o6b_A 74 LIDYARRKNAKAILRGLRAVSDFEYEMQGTSVNRVLDESIETFFMMANNQYSFLSSSIVKEVARYD 139 (169)
T ss_dssp HHHHHHHTTCSEEEEEECSGGGHHHHHHHHHHHHHHCTTSEEEEEECCSTTTTCCHHHHHHHHHTT
T ss_pred HHHHHHHcCCCEEEEcCccccchHHHHHHHHHhccccCCCCEEEEECCCCCCcCcHHHHHHHHHcC
Confidence 3334467889999999998776433222222222 1123332222 359999999999876
No 20
>3nv7_A Phosphopantetheine adenylyltransferase; helicobacter pylori 26695 strain, mutant I4V/N76Y, phosphopa adenylyltransferase; 1.75A {Helicobacter pylori} PDB: 3otw_A*
Probab=99.68 E-value=1.1e-17 Score=150.14 Aligned_cols=126 Identities=20% Similarity=0.222 Sum_probs=90.5
Q ss_pred CeEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhc-CccccEEEecCCcc-ccH
Q 014503 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKWVDEVIANAPYA-ITE 142 (423)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~-~~~VD~vi~~~p~~-~~~ 142 (423)
++++++.|+||++|.||+.++++|++++|+|+|++.+++ .| +|+++.+||++|++. ++.++.+.. .+|+ ...
T Consensus 2 m~i~i~~GsFDPiH~GHl~ii~~A~~~~D~viv~v~~~~----~K-~~~~~~~eR~~ml~~a~~~~~~v~v-~~~~~l~~ 75 (157)
T 3nv7_A 2 QKVGIYPGTFDPVTNGHIDIIHRSSELFEKLIVAVAHSS----AK-NPMFSLDERLKMIQLATKSFKNVEC-VAFEGLLA 75 (157)
T ss_dssp -CEEEEEECCTTCCHHHHHHHHHHHTTSSEEEEEEECCG----GG-CCSSCHHHHHHHHHHHHTTSTTEEE-EEECSCHH
T ss_pred CEEEEEEEEcCCCCHHHHHHHHHHHHhCCceEEEEccCC----CC-CCCCCHHHHHHHHHHHhcCCCcEEE-EecCchHH
Confidence 358999999999999999999999999999999998875 34 589999999999987 667787654 2232 234
Q ss_pred HHHHHHHhhcCccEEEEc----CCCCCCCCCCcHHHHHHhC---CcEEEeccCC---CCCHHHHHHHHHhc
Q 014503 143 QFMNRLFNEHKIDYIIHG----DDPCLLPDGTDAYALAKKV---GRYKQIKRTE---GVSSTDIVGRILSS 203 (423)
Q Consensus 143 efl~~ll~~~~~d~VV~G----~D~~~g~~g~~~~~~lk~~---g~~~~v~r~~---~iSST~Ir~rI~~~ 203 (423)
+|+ ++++|+++|.| .||.+..+ ....-+.. .+.+.++.++ .+|||.||+.+..+
T Consensus 76 ~~~----~~~~~~~ivrG~r~~~D~~ye~~---~a~~n~~l~~~ietv~l~~~~~~~~iSSt~vRe~~~~g 139 (157)
T 3nv7_A 76 YLA----KEYHCKVLVRGLRVVSDFEYELQ---MGYANKSLNHELETLYFMPTLQNAFISSSIVRSIIAHK 139 (157)
T ss_dssp HHH----HHTTCCCBCCCCSCCCCHHHHHH---HHHHHHHSSCCCCCCCCCCCHHHHTCCHHHHHHHHHTT
T ss_pred HHH----HHcCCCEEEECCcccchhhhhHH---HHHHHHHhCCCceEEEEcCCcccceeeHHHHHHHHHcC
Confidence 554 57899999999 77632100 00011122 1333344443 69999999998755
No 21
>4f3r_A Phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltranferase; 2.25A {Coxiella burnetii}
Probab=99.67 E-value=4.4e-17 Score=146.84 Aligned_cols=130 Identities=19% Similarity=0.213 Sum_probs=86.3
Q ss_pred CeEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhcCccccEEEecCCccccHHH
Q 014503 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQF 144 (423)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~~VD~vi~~~p~~~~~ef 144 (423)
++++++.|+||++|.||+.++++|++++|+|+|++..++ .| +|+++.+||++|++.+...+.+........+.++
T Consensus 5 m~i~i~~GsFDPiH~GHl~li~~A~~~~d~viv~v~~~~----~K-~~~~~~~~R~~m~~~~~~~~~v~V~~~~~l~~~~ 79 (162)
T 4f3r_A 5 KPIAIYPGTFDPLTNGHVDIIERALPLFNKIIVACAPTS----RK-DPHLKLEERVNLIADVLTDERVEVLPLTGLLVDF 79 (162)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHGGGCSEEEEEECCC-----------CCHHHHHHHHHHHCCCTTEEEEECCSCHHHH
T ss_pred eEEEEEEEEcCCCCHHHHHHHHHHHHHCCcEEEEEecCC----cc-CCCCCHHHHHHHHHHhhCCCCEEEEeccchHHHH
Confidence 468999999999999999999999999999999999775 34 6899999999999875444655442212234455
Q ss_pred HHHHHhhcCccEEEEc----CCCCCCCCCCcHHHHHHhCCcEEEeccCC---CCCHHHHHHHHHhc
Q 014503 145 MNRLFNEHKIDYIIHG----DDPCLLPDGTDAYALAKKVGRYKQIKRTE---GVSSTDIVGRILSS 203 (423)
Q Consensus 145 l~~ll~~~~~d~VV~G----~D~~~g~~g~~~~~~lk~~g~~~~v~r~~---~iSST~Ir~rI~~~ 203 (423)
+ ++++++++|.| .||.....-......+....+.+.+...+ .||||.||+++..+
T Consensus 80 ~----~~~~~~~~v~G~r~~~Df~~e~~~a~~nr~l~~~ietv~l~~~~~~~~ISST~IRe~~~~g 141 (162)
T 4f3r_A 80 A----KTHQANFILRGLRAVSDFDYEFQLAHMNYQLSPEIETIFLPAREGYSYVSGTMVREIVTLG 141 (162)
T ss_dssp H----HHTTCCEEEEEECSHHHHHHHHHHHHHHHHHCTTCEEEEEECCGGGSSCCHHHHHHHHHTT
T ss_pred H----HHcCCCEEEECCCchhhhhhHHHHHHHHHHhCCCccEEEEECCcccccccHHHHHHHHHcC
Confidence 5 56799999999 55521100000000111122344444443 79999999998865
No 22
>2qtr_A Nicotinate (nicotinamide) nucleotide adenylyltran; NAD, nucleotidyltransferase, pyridine nucleotide biosynthesi transferase; HET: NXX; 1.70A {Bacillus anthracis} PDB: 3dv2_A 3mla_A* 3hfj_A* 3mlb_A* 3mmx_A* 3e27_A* 2qtn_A* 2qtm_A*
Probab=99.66 E-value=1e-16 Score=146.80 Aligned_cols=133 Identities=19% Similarity=0.083 Sum_probs=99.1
Q ss_pred eEEEEecccCcCcHHHHHHHHHHHHhc--CeeEEEEecchhhhccCC-CCCCcHHHHHHHHhc-CccccEEEecCCcc--
Q 014503 66 VRVYMDGCFDLMHYGHANALRQAKALG--DELVVGVVSDEEIIANKG-PPVLSMEERLALVSG-LKWVDEVIANAPYA-- 139 (423)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~~~--d~LiVgV~sd~~i~~~K~-~pi~t~eER~~~l~~-~~~VD~vi~~~p~~-- 139 (423)
++++++|+|||+|.||+.++++|++.+ +.+++++++++. .|+ +++++.+||++|++. ++++|.+.. .+|+
T Consensus 3 ~i~i~~GsFDPvH~GH~~li~~a~~~~~~d~v~~~~~~~~~---~k~~~~~~~~~~R~~ml~~~~~~~~~v~v-~~~e~~ 78 (189)
T 2qtr_A 3 KIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPP---HKQGRNITSVESRLQMLELATEAEEHFSI-CLEELS 78 (189)
T ss_dssp EEEEEEECCSSCCHHHHC-CHHHHHHTTCSEEEEEECSSCT---TCTTSCCCCHHHHHHHHHHHHTTCTTEEE-CCTGGG
T ss_pred eEEEEecCcccccHHHHHHHHHHHHHcCCCEEEEEECCCCC---CccCCCCCCHHHHHHHHHHHhCCCCCEEE-ehHHhc
Confidence 578999999999999999999999998 899999988763 343 579999999999995 667887766 4453
Q ss_pred -----ccHHHHHHHHhhcCcc---EEEEcCCCCCCCCCCcHHHHHHhCCcEEEeccC-----------------CCCCHH
Q 014503 140 -----ITEQFMNRLFNEHKID---YIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRT-----------------EGVSST 194 (423)
Q Consensus 140 -----~~~efl~~ll~~~~~d---~VV~G~D~~~g~~g~~~~~~lk~~g~~~~v~r~-----------------~~iSST 194 (423)
++.++++.+-.++ |+ ++|+|.|+.++..+-+.++.+.+.+.+..++|. ..||||
T Consensus 79 ~~~~~~~~~~l~~l~~~~-p~~~~~~v~G~D~~~~~~~w~~~~~l~~~~~~~v~~r~~~~~~~~~~v~~~~~~~~~iSST 157 (189)
T 2qtr_A 79 RKGPSYTYDTMLQLTKKY-PDVQFHFIIGGDMVEYLPKWYNIEALLDLVTFVGVARPGYKLRTPYPITTVEIPEFAVSSS 157 (189)
T ss_dssp SCSCCCHHHHHHHHHHHC-TTCEEEEEEEHHHHHHGGGSTTHHHHTTTCEEEEECCTTCCCCCSSCCEEECCCCCCCCHH
T ss_pred CCCCCCHHHHHHHHHHHC-CCCCEEEEEehhhhhhhhccCCHHHHHHhCCEEEEECCCCCccCCceEEEEcCCCCccCHH
Confidence 4455655443333 33 399999987665544456777777766555441 259999
Q ss_pred HHHHHHHhc
Q 014503 195 DIVGRILSS 203 (423)
Q Consensus 195 ~Ir~rI~~~ 203 (423)
.||+++.++
T Consensus 158 ~IR~~l~~g 166 (189)
T 2qtr_A 158 LLRERYKEK 166 (189)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHcC
Confidence 999999865
No 23
>1kam_A Deamido-NAD(+), nicotinate-nucleotide adenylyltransferase; rossman fold; 2.10A {Bacillus subtilis} SCOP: c.26.1.3 PDB: 1kaq_A*
Probab=99.65 E-value=1.7e-15 Score=139.67 Aligned_cols=132 Identities=19% Similarity=0.096 Sum_probs=92.7
Q ss_pred eEEEEecccCcCcHHHHHHHHHHHHhc--CeeEEEEecchhhhccCC-CCCCcHHHHHHHHh-cCccccEEEecCCcc--
Q 014503 66 VRVYMDGCFDLMHYGHANALRQAKALG--DELVVGVVSDEEIIANKG-PPVLSMEERLALVS-GLKWVDEVIANAPYA-- 139 (423)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~~~--d~LiVgV~sd~~i~~~K~-~pi~t~eER~~~l~-~~~~VD~vi~~~p~~-- 139 (423)
++++++|+|||+|.||+.++++|++.+ +.+++++++++. .|. +++++.++|++|++ ++++++.+.. .+|+
T Consensus 8 ~~~v~~GsFdp~H~GH~~l~~~a~~~~~~d~v~~~~~~~~~---~k~~~~~~~~~~R~~ml~~a~~~~~~v~v-~~~e~~ 83 (194)
T 1kam_A 8 KIGIFGGTFDPPHNGHLLMANEVLYQAGLDEIWFMPNQIPP---HKQNEDYTDSFHRVEMLKLAIQSNPSFKL-ELVEME 83 (194)
T ss_dssp EEEEEEECCSSCCHHHHHHHHHHHHHTTCSEEEEEECCCC------------CHHHHHHHHHHHHTTCTTEEE-CCGGGS
T ss_pred EEEEEEeccccccHHHHHHHHHHHHHhCCCEEEEEECCCCC---CcCCcCCCCHHHHHHHHHHHHcCCCCeEE-eHHHhc
Confidence 578999999999999999999999998 889998987763 343 57899999999999 4778887766 3443
Q ss_pred -----ccHHHHHHHHhhcCcc---EEEEcCCCCCC-CCCCcHHHHHHhCCcEEEeccC-----------------CCCCH
Q 014503 140 -----ITEQFMNRLFNEHKID---YIIHGDDPCLL-PDGTDAYALAKKVGRYKQIKRT-----------------EGVSS 193 (423)
Q Consensus 140 -----~~~efl~~ll~~~~~d---~VV~G~D~~~g-~~g~~~~~~lk~~g~~~~v~r~-----------------~~iSS 193 (423)
++.++++.+-.++ |+ ++|+|.|+.++ ..|.+ ++.+.+...+..+.|. ..|||
T Consensus 84 ~~~~~~t~~~l~~l~~~~-p~~~~~~v~G~D~~~~~~~W~~-~e~i~~~~~~~v~~R~g~~~~l~~~i~~~~~~~~~ISS 161 (194)
T 1kam_A 84 REGPSYTFDTVSLLKQRY-PNDQLFFIIGADMIEYLPKWYK-LDELLNLIQFIGVKRPGFHVETPYPLLFADVPEFEVSS 161 (194)
T ss_dssp TTCCCSHHHHHHHHHHHS-TTSEEEEEEETTTTTTCCCCHH-HHHHHHHSEEEEEECSSCCCCCSSCCEEEECCCBCCCH
T ss_pred CCCCCChHHHHHHHHHHC-CCCcEEEEEecchhhhhccccC-HHHHHHhCcEEEEECCCcchhcCCCEEEeCCCCCCcCH
Confidence 5566776665555 55 99999997655 34443 3433333444433331 25999
Q ss_pred HHHHHHHHhc
Q 014503 194 TDIVGRILSS 203 (423)
Q Consensus 194 T~Ir~rI~~~ 203 (423)
|.||+++..+
T Consensus 162 T~IR~~i~~g 171 (194)
T 1kam_A 162 TMIRERFKSK 171 (194)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHcC
Confidence 9999999876
No 24
>3nbk_A Phosphopantetheine adenylyltransferase; PPAT, PHP; HET: PNS; 1.58A {Mycobacterium tuberculosis} PDB: 3nba_A* 3pnb_A* 4e1a_A 3lcj_A 3rba_A* 1tfu_A* 3rff_A 3rhs_A* 3uc5_A*
Probab=99.64 E-value=4.1e-16 Score=142.18 Aligned_cols=130 Identities=18% Similarity=0.265 Sum_probs=98.0
Q ss_pred CCCCeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHh-hcccCeeEEcCCC
Q 014503 253 GPNARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA-CRYVDEVIIGAPW 331 (423)
Q Consensus 253 ~~~~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~-~~~Vd~Vvi~~p~ 331 (423)
..++++++++|+|||+|.||++++++|++++|+|+|++..+. .| +|+++.+||+.+++. ++..+.|.+.+..
T Consensus 18 ~~~mki~i~~GsFDPiH~GHl~ii~~A~~~~D~Viv~v~~np----~K---~~~~s~eeR~~mv~~a~~~~~~v~V~~~e 90 (177)
T 3nbk_A 18 GSHMTGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNP----AK---TGMFDLDERIAMVKESTTHLPNLRVQVGH 90 (177)
T ss_dssp --CCCEEEEEECCTTCCHHHHHHHHHHHHHSSEEEEEECCCT----TS---CCSSCHHHHHHHHHHHCTTCTTEEEEECC
T ss_pred CCCCEEEEEEEeeCCCCHHHHHHHHHHHHHCCEEEEEEcCCC----CC---CCCCCHHHHHHHHHHHhCCCCCEEEEecC
Confidence 456789999999999999999999999999999999999774 34 489999999998875 7889999887777
Q ss_pred CchHHHHhhcCccEEEecCCcCCCCCCCCCCChHHH-----HH--hCCeEEEeC-CC--CCCCHHHHHHHHHhch
Q 014503 332 EVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEV-----AK--SMGIFQLLE-SP--KSITTTSVAQRIIANH 396 (423)
Q Consensus 332 ~~~~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~-----~k--~~G~~~~i~-~~--~~~Stt~Ii~RI~~~~ 396 (423)
+.+.+++++++++++++|-+... ++ .|+. .+ ..-..+++. .+ ..+|||.|.+++....
T Consensus 91 ~l~vd~~~~~~a~~ivrGlr~~~-Df------eye~~~a~~nr~l~~ietvfl~~~~~~~~ISST~IRe~~~~gg 158 (177)
T 3nbk_A 91 GLVVDFVRSCGMTAIVKGLRTGT-DF------EYELQMAQMNKHIAGVDTFFVATAPRYSFVSSSLAKEVAMLGG 158 (177)
T ss_dssp SCHHHHHHHTTCCEEEEEECTTC-CH------HHHHHHHHHHHHHHCCEEEEEECCGGGSSCCHHHHHHHHHTTC
T ss_pred chHHHHHHHcCCCEEEECCCchh-HH------HHHHHHHHHHHhcCCCceEEEeCCCcccccchHHHHHHHHcCC
Confidence 78899999999999999933211 11 1211 11 222233442 22 4799999998876544
No 25
>3nd5_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway; 2.30A {Enterococcus faecalis} SCOP: c.26.1.0 PDB: 3nd6_A* 3nd7_A*
Probab=99.63 E-value=4.2e-16 Score=141.63 Aligned_cols=132 Identities=12% Similarity=0.271 Sum_probs=93.4
Q ss_pred CeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHH-hhcccCeeEE-cCCCCc
Q 014503 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVL-ACRYVDEVII-GAPWEV 333 (423)
Q Consensus 256 ~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~-~~~~Vd~Vvi-~~p~~~ 333 (423)
+++++++|+|||+|.||+.++++|++++|+|+|++..+. .| +|+++.+||+.+++ +++.++.|.+ .+..+.
T Consensus 2 m~i~i~~GsFDPiH~GHl~i~~~a~~~~D~viv~v~~~~----~K---~~~~~~~~R~~ml~~a~~~~~~v~v~~~~e~~ 74 (171)
T 3nd5_A 2 RKIALFPGSFDPMTNGHLNLIERSAKLFDEVIIGVFINT----SK---QTLFTPEEKKYLIEEATKEMPNVRVIMQETQL 74 (171)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHTTCSEEEEEEEC-------------CCCHHHHHHHHHHHHTTCTTEEEEEECSSC
T ss_pred CeEEEEEEEccccCHHHHHHHHHHHHHCCCeEEEEecCC----CC---CCCCCHHHHHHHHHHHHccCCCEEEeeCCCCc
Confidence 478999999999999999999999999999999998763 34 48999999999997 5799999887 555567
Q ss_pred hHHHHhhcCccEEEecCCcCCCCCCCCCCChHHHHHh----CCeEEEeCCC--CCCCHHHHHHHHHhch
Q 014503 334 TKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKS----MGIFQLLESP--KSITTTSVAQRIIANH 396 (423)
Q Consensus 334 ~~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~----~G~~~~i~~~--~~~Stt~Ii~RI~~~~ 396 (423)
+.+++++++++++++|-+... ++. .+.......+. .+.+..++.+ ..+|||.|.+++..+.
T Consensus 75 tvd~~~~l~~~~~i~G~~~~~-d~~-~e~~la~~nr~l~~~~etv~l~~~~~~~~ISST~IRe~~~~g~ 141 (171)
T 3nd5_A 75 TVESAKSLGANFLIRGIRNVK-DYE-YEKDIAKMNQHLAPEIETVFLLAEEPYAHVSSSLLKEVLRFGG 141 (171)
T ss_dssp HHHHHHHHTCCEEEEEECSHH-HHH-HHHHHHHHHHHHCTTSEEEEEECCGGGTTCCHHHHHHHHHTTC
T ss_pred HHHHHHHCCCCEEEECCCchh-hhH-HHHHHHHHhhhhcCCccEEEEeCCccccccchHHHHHHHHcCC
Confidence 899999999999999943211 110 00000001111 2233333333 4799999999987644
No 26
>1vlh_A Phosphopantetheine adenylyltransferase; TM0741, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: PNS; 2.20A {Thermotoga maritima} SCOP: c.26.1.3
Probab=99.62 E-value=1.5e-15 Score=138.09 Aligned_cols=127 Identities=20% Similarity=0.227 Sum_probs=94.7
Q ss_pred CeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHH-hhcccCeeEEcCCCCch
Q 014503 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVL-ACRYVDEVIIGAPWEVT 334 (423)
Q Consensus 256 ~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~-~~~~Vd~Vvi~~p~~~~ 334 (423)
.-+++++|+|||+|.||+.++++|++++|+|+|+++++. .| +|+++.+||+++++ +++.++.|.+.+..+.+
T Consensus 12 ~~i~i~~GsFdP~H~GHl~l~~~A~~~~D~viv~v~~~~----~k---k~~~~~~~R~~ml~~a~~~~~~v~v~~~e~~t 84 (173)
T 1vlh_A 12 HMKAVYPGSFDPITLGHVDIIKRALSIFDELVVLVTENP----RK---KCMFTLEERKKLIEEVLSDLDGVKVDVHHGLL 84 (173)
T ss_dssp -CEEEEEECCTTCCHHHHHHHHHHHTTCSEEEEEEECCT----TC---CCSSCHHHHHHHHHHHTTTCTTEEEEEECSCH
T ss_pred ceEEEEEEEECcCcHHHHHHHHHHHHHCCEEEEEEeCCC----CC---CCCCCHHHHHHHHHHHhcCCCCEEEecCcchH
Confidence 357999999999999999999999999999999999973 23 48999999999998 79999998886544578
Q ss_pred HHHHhhcCccEEEecC----CcCCCCCCCCCCChHHH-HHhC---CeEEEeCCC---CCCCHHHHHHHHHhch
Q 014503 335 KDMITTFNICLVVHGT----VSETNTPLTGQSDPYEV-AKSM---GIFQLLESP---KSITTTSVAQRIIANH 396 (423)
Q Consensus 335 ~~~i~~~~~d~vv~G~----d~~~~~~~~~~~d~~~~-~k~~---G~~~~i~~~---~~~Stt~Ii~RI~~~~ 396 (423)
.++++.++++++++|- +|+.. ....+ .+.+ ...+++... ..+|+|.|.+++..+.
T Consensus 85 vd~l~~l~~~~~i~gl~~w~d~~~~-------~~~~~~~r~~~~~~~~i~l~~~~~~~~iSST~IR~~i~~g~ 150 (173)
T 1vlh_A 85 VDYLKKHGIKVLVRGLRAVTDYEYE-------LQMALANKKLYSDLETVFLIASEKFSFISSSLVKEVALYGG 150 (173)
T ss_dssp HHHHHHHTCCEEEEEECTTSCHHHH-------HHHHHHHHHHSTTCEEEEEECCGGGTTCCHHHHHHHHHTTC
T ss_pred HHHHHHhCCCeEEeCCCcccchhhc-------cchhhcCCCCCCCCcEEEEeCCCCCCceeHHHHHHHHHcCC
Confidence 8999999999999983 22110 01111 1211 122333222 3699999999987644
No 27
>1od6_A PPAT, phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.5A {Thermus thermophilus} SCOP: c.26.1.3
Probab=99.62 E-value=2e-15 Score=134.45 Aligned_cols=122 Identities=23% Similarity=0.285 Sum_probs=85.5
Q ss_pred EEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCC-CCCCcHHHHHHHHhc-CccccEEEecCCccccHHHH
Q 014503 68 VYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKG-PPVLSMEERLALVSG-LKWVDEVIANAPYAITEQFM 145 (423)
Q Consensus 68 V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~-~pi~t~eER~~~l~~-~~~VD~vi~~~p~~~~~efl 145 (423)
++++|+|||+|.||+.++++|++.++.++++++.++ .|+ +++++.++|++|++. +.++|.+.. .+|+ +|.
T Consensus 3 ~v~~GsFdp~H~GH~~l~~~a~~~~d~v~v~~~~~p----~k~~~~~~~~~~R~~ml~~a~~~~~~v~v-~~~e---~~~ 74 (160)
T 1od6_A 3 VVYPGSFDPLTNGHLDVIQRASRLFEKVTVAVLENP----SKRGQYLFSAEERLAIIREATAHLANVEA-ATFS---GLL 74 (160)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHSSEEEEEEECC---------CCSSCHHHHHHHHHHHTTTCTTEEE-EEEC---SCH
T ss_pred EEEEeeeCCCCHHHHHHHHHHHHHCCEEEEEEcCCC----CCCCCCCCCHHHHHHHHHHHhcCCCCEEE-EecC---chH
Confidence 899999999999999999999999999999888654 243 478999999999985 567786655 2343 134
Q ss_pred HHHHhhcCccEEEEcCCCCCCCCCCcHHHHHH-------hCC---c-EEEecc--CCCCCHHHHHHHHHhc
Q 014503 146 NRLFNEHKIDYIIHGDDPCLLPDGTDAYALAK-------KVG---R-YKQIKR--TEGVSSTDIVGRILSS 203 (423)
Q Consensus 146 ~~ll~~~~~d~VV~G~D~~~g~~g~~~~~~lk-------~~g---~-~~~v~r--~~~iSST~Ir~rI~~~ 203 (423)
.+++++++++++++|.|- +.+ ++.+. ..+ . +..+.. ...||||.||+++.++
T Consensus 75 ~~~l~~l~~~~~v~G~d~-----~~~-~~~~~~~~~~~r~~~~~~~~i~~~~~~~~~~ISST~IR~~l~~G 139 (160)
T 1od6_A 75 VDFVRRVGAQAIVKGLRA-----VSD-YEYELQMAHLNRQLYPGLETLFILAATRYSFVSSTMVKEIARYG 139 (160)
T ss_dssp HHHHHHTTCSEEEEEECT-----TSC-HHHHHHHHHHHHHHTTTCEEEEEECCGGGTTCCHHHHHHHHHTT
T ss_pred HHHHHHcCCCEEEEeCCc-----ccc-hHHHHHHHHhCcCCCCCCCEEEEeCCCCCCcccHHHHHHHHHcC
Confidence 345567899999999872 111 22221 111 2 222322 2369999999999876
No 28
>3f3m_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway, coenzyme A biosynthesis, nucleotidyltransferase; HET: PPS; 2.40A {Staphylococcus aureus} SCOP: c.26.1.0
Probab=99.60 E-value=2.3e-15 Score=136.33 Aligned_cols=132 Identities=14% Similarity=0.174 Sum_probs=95.0
Q ss_pred CeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHh-hcccCeeEEcCCCCch
Q 014503 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA-CRYVDEVIIGAPWEVT 334 (423)
Q Consensus 256 ~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~-~~~Vd~Vvi~~p~~~~ 334 (423)
+++++++|+|||+|.||+.++++|++++|+|+|+++.+. .| +|+++.+||+.+++. ++.++.|.+.+..+.+
T Consensus 3 ~ki~i~~GsFDPiH~GHl~i~~~a~~~~d~viv~v~~~p----~K---~~~~~~~~R~~ml~~a~~~~~~v~v~~~e~~t 75 (168)
T 3f3m_A 3 HTIAVIPGSFDPITYGHLDIIERSTDRFDEIHVCVLKNS----KK---EGTFSLEERMDLIEQSVKHLPNVKVHQFSGLL 75 (168)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHGGGSSEEEEEECC------------CCSCHHHHHHHHHHHTTTCTTEEEEECCSCH
T ss_pred ceEEEEEEEcCcCCHHHHHHHHHHHHhCCEEEEEEcCCC----CC---CCCCCHHHHHHhHHHHhcCCCCEEEEEcCCCH
Confidence 579999999999999999999999999999999999764 34 589999999999875 6888988776666778
Q ss_pred HHHHhhcCccEEEecCCcCCCCCCCCCCChHHHHHh----CCeEEEeCCC--CCCCHHHHHHHHHhch
Q 014503 335 KDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKS----MGIFQLLESP--KSITTTSVAQRIIANH 396 (423)
Q Consensus 335 ~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~----~G~~~~i~~~--~~~Stt~Ii~RI~~~~ 396 (423)
.+++++++++++++|.|...+ +..+ .......+. ...+..++.+ ..+|||.|.+++....
T Consensus 76 vd~~~~l~~~~~I~G~d~~~d-~~~e-~~~a~~~r~l~~~~e~v~l~~~p~~~~ISST~IRe~~~~g~ 141 (168)
T 3f3m_A 76 VDYCEQVGAKTIIRGLRAVSD-FEYE-LRLTSMNKKLNNEIETLYMMSSTNYSFISSSIVKEVAAYRA 141 (168)
T ss_dssp HHHHHHHTCCEEEEEECTTCC-HHHH-HHHHHHHHHHCTTSEEEEEECCTTTTTCCHHHHHHHHHTTC
T ss_pred HHHHHHcCCCEEEEcCCchhh-hhHH-HHHhHHhHhhCCCCcEEEEeCCcccccccHHHHHHHHHcCC
Confidence 999999999999999653221 1000 000001111 1223333333 2499999999987665
No 29
>3f3m_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway, coenzyme A biosynthesis, nucleotidyltransferase; HET: PPS; 2.40A {Staphylococcus aureus} SCOP: c.26.1.0
Probab=99.60 E-value=1.5e-15 Score=137.68 Aligned_cols=129 Identities=19% Similarity=0.243 Sum_probs=84.6
Q ss_pred CeEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhc-CccccEEEecCCc-cccH
Q 014503 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKWVDEVIANAPY-AITE 142 (423)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~-~~~VD~vi~~~p~-~~~~ 142 (423)
+++++++|+|||+|.||+.++++|++++|+++|++..++ .| +++++.++|++|++. ++..+.+.. .+| .++.
T Consensus 3 ~ki~i~~GsFDPiH~GHl~i~~~a~~~~d~viv~v~~~p----~K-~~~~~~~~R~~ml~~a~~~~~~v~v-~~~e~~tv 76 (168)
T 3f3m_A 3 HTIAVIPGSFDPITYGHLDIIERSTDRFDEIHVCVLKNS----KK-EGTFSLEERMDLIEQSVKHLPNVKV-HQFSGLLV 76 (168)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHGGGSSEEEEEECC----------CCSCHHHHHHHHHHHTTTCTTEEE-EECCSCHH
T ss_pred ceEEEEEEEcCcCCHHHHHHHHHHHHhCCEEEEEEcCCC----CC-CCCCCHHHHHHhHHHHhcCCCCEEE-EEcCCCHH
Confidence 468999999999999999999999999999999999764 34 589999999999985 455665543 122 2455
Q ss_pred HHHHHHHhhcCccEEEEcCCCCCCCCCC-cHHHHHHhC---CcEEEeccCC---CCCHHHHHHHHHhc
Q 014503 143 QFMNRLFNEHKIDYIIHGDDPCLLPDGT-DAYALAKKV---GRYKQIKRTE---GVSSTDIVGRILSS 203 (423)
Q Consensus 143 efl~~ll~~~~~d~VV~G~D~~~g~~g~-~~~~~lk~~---g~~~~v~r~~---~iSST~Ir~rI~~~ 203 (423)
+++ +++++++++.|-|--.+...+ .....-+.. .+.+.+..++ .||||.||+++..+
T Consensus 77 d~~----~~l~~~~~I~G~d~~~d~~~e~~~a~~~r~l~~~~e~v~l~~~p~~~~ISST~IRe~~~~g 140 (168)
T 3f3m_A 77 DYC----EQVGAKTIIRGLRAVSDFEYELRLTSMNKKLNNEIETLYMMSSTNYSFISSSIVKEVAAYR 140 (168)
T ss_dssp HHH----HHHTCCEEEEEECTTCCHHHHHHHHHHHHHHCTTSEEEEEECCTTTTTCCHHHHHHHHHTT
T ss_pred HHH----HHcCCCEEEEcCCchhhhhHHHHHhHHhHhhCCCCcEEEEeCCcccccccHHHHHHHHHcC
Confidence 665 456899999994421110101 000001111 1222222222 39999999999865
No 30
>1k4m_A NAMN adenylyltransferase; nucleotidyltransferase; HET: NAD CIT; 1.90A {Escherichia coli} SCOP: c.26.1.3 PDB: 1k4k_A*
Probab=99.58 E-value=2.5e-15 Score=140.60 Aligned_cols=91 Identities=19% Similarity=0.230 Sum_probs=75.5
Q ss_pred EEEecccCcCcHHHHHHHHHHHHhc--CeeEEEEecchhhhccCCCCCCcHHHHHHHHh-cCccccEEEecCCc------
Q 014503 68 VYMDGCFDLMHYGHANALRQAKALG--DELVVGVVSDEEIIANKGPPVLSMEERLALVS-GLKWVDEVIANAPY------ 138 (423)
Q Consensus 68 V~~~G~FD~lH~GH~~lL~qA~~~~--d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~-~~~~VD~vi~~~p~------ 138 (423)
++++|+|||+|.||+.++++|++.+ +.+++.+++++. .|..++++.++|++|++ ++++++.+.. .+|
T Consensus 6 ~i~~GsFdPiH~GH~~l~~~a~~~~~~d~v~~~~~~~~~---~k~~~~~~~~~R~~ml~~a~~~~~~v~v-~~~e~~~~~ 81 (213)
T 1k4m_A 6 ALFGGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVPP---HRPQPEANSVQRKHMLELAIADKPLFTL-DERELKRNA 81 (213)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHHTCSCEEEEECSSCT---TSCCCSSCHHHHHHHHHHHHTTCTTEEE-CCHHHHCSS
T ss_pred EEEEeCcCCCCHHHHHHHHHHHHHcCCCEEEEEECCCCC---CCCCCCCCHHHHHHHHHHHhccCCCEEE-eHHHhcCCC
Confidence 8999999999999999999999998 889998887753 34346899999999998 5677887766 334
Q ss_pred -cccHHHHHHHHhhcCcc---EEEEcCC
Q 014503 139 -AITEQFMNRLFNEHKID---YIIHGDD 162 (423)
Q Consensus 139 -~~~~efl~~ll~~~~~d---~VV~G~D 162 (423)
.++.+|++.+.++++++ ++++|.|
T Consensus 82 ~s~t~~~l~~l~~~~~~~~~~~~i~G~D 109 (213)
T 1k4m_A 82 PSYTAQTLKEWRQEQGPDVPLAFIIGQD 109 (213)
T ss_dssp CCCHHHHHHHHHHHHCTTSCEEEEEEHH
T ss_pred CCcHHHHHHHHHHHhCCCCcEEEEEehh
Confidence 35678998877777899 9999997
No 31
>3nbk_A Phosphopantetheine adenylyltransferase; PPAT, PHP; HET: PNS; 1.58A {Mycobacterium tuberculosis} PDB: 3nba_A* 3pnb_A* 4e1a_A 3lcj_A 3rba_A* 1tfu_A* 3rff_A 3rhs_A* 3uc5_A*
Probab=99.58 E-value=3.8e-15 Score=135.79 Aligned_cols=132 Identities=17% Similarity=0.173 Sum_probs=90.8
Q ss_pred CCCCeEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhc-CccccEEEecCCccc
Q 014503 62 KKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKWVDEVIANAPYAI 140 (423)
Q Consensus 62 ~~~~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~-~~~VD~vi~~~p~~~ 140 (423)
+.+++++++.|+|||+|.||+.++++|++++|+|+|++..++ .| +++++.+||++|++. ++..+.+....--.+
T Consensus 18 ~~~mki~i~~GsFDPiH~GHl~ii~~A~~~~D~Viv~v~~np----~K-~~~~s~eeR~~mv~~a~~~~~~v~V~~~e~l 92 (177)
T 3nbk_A 18 GSHMTGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNP----AK-TGMFDLDERIAMVKESTTHLPNLRVQVGHGL 92 (177)
T ss_dssp --CCCEEEEEECCTTCCHHHHHHHHHHHHHSSEEEEEECCCT----TS-CCSSCHHHHHHHHHHHCTTCTTEEEEECCSC
T ss_pred CCCCEEEEEEEeeCCCCHHHHHHHHHHHHHCCEEEEEEcCCC----CC-CCCCCHHHHHHHHHHHhCCCCCEEEEecCch
Confidence 345789999999999999999999999999999999999764 34 589999999999985 556666554221234
Q ss_pred cHHHHHHHHhhcCccEEEEc----CCCCCCCCCCcHHHHHHhCCcEEEecc---CCCCCHHHHHHHHHhc
Q 014503 141 TEQFMNRLFNEHKIDYIIHG----DDPCLLPDGTDAYALAKKVGRYKQIKR---TEGVSSTDIVGRILSS 203 (423)
Q Consensus 141 ~~efl~~ll~~~~~d~VV~G----~D~~~g~~g~~~~~~lk~~g~~~~v~r---~~~iSST~Ir~rI~~~ 203 (423)
+.+|+ +++++++++.| .||..-.+-......+ ...+.+.+.. ...||||.||+++..+
T Consensus 93 ~vd~~----~~~~a~~ivrGlr~~~Dfeye~~~a~~nr~l-~~ietvfl~~~~~~~~ISST~IRe~~~~g 157 (177)
T 3nbk_A 93 VVDFV----RSCGMTAIVKGLRTGTDFEYELQMAQMNKHI-AGVDTFFVATAPRYSFVSSSLAKEVAMLG 157 (177)
T ss_dssp HHHHH----HHTTCCEEEEEECTTCCHHHHHHHHHHHHHH-HCCEEEEEECCGGGSSCCHHHHHHHHHTT
T ss_pred HHHHH----HHcCCCEEEECCCchhHHHHHHHHHHHHHhc-CCCceEEEeCCCcccccchHHHHHHHHcC
Confidence 56666 46899999999 4442100000000112 3334333332 3469999999998754
No 32
>3nd5_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway; 2.30A {Enterococcus faecalis} SCOP: c.26.1.0 PDB: 3nd6_A* 3nd7_A*
Probab=99.57 E-value=1.6e-15 Score=137.75 Aligned_cols=128 Identities=20% Similarity=0.205 Sum_probs=84.2
Q ss_pred CeEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhc-CccccEEEe-cCCccccH
Q 014503 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKWVDEVIA-NAPYAITE 142 (423)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~-~~~VD~vi~-~~p~~~~~ 142 (423)
+++++++|+|||+|.||+.++++|++++|+|+|++..++ .| +|+++.++|++|++. ++.++.+.. ..--.++.
T Consensus 2 m~i~i~~GsFDPiH~GHl~i~~~a~~~~D~viv~v~~~~----~K-~~~~~~~~R~~ml~~a~~~~~~v~v~~~~e~~tv 76 (171)
T 3nd5_A 2 RKIALFPGSFDPMTNGHLNLIERSAKLFDEVIIGVFINT----SK-QTLFTPEEKKYLIEEATKEMPNVRVIMQETQLTV 76 (171)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHTTCSEEEEEEEC-----------CCCHHHHHHHHHHHHTTCTTEEEEEECSSCHH
T ss_pred CeEEEEEEEccccCHHHHHHHHHHHHHCCCeEEEEecCC----CC-CCCCCHHHHHHHHHHHHccCCCEEEeeCCCCcHH
Confidence 368999999999999999999999999999999997654 34 489999999999984 567776644 21113456
Q ss_pred HHHHHHHhhcCccEEEEcCCCCCCCCCCcHHHH--H-Hh---CCcEEEec---cCCCCCHHHHHHHHHhc
Q 014503 143 QFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYAL--A-KK---VGRYKQIK---RTEGVSSTDIVGRILSS 203 (423)
Q Consensus 143 efl~~ll~~~~~d~VV~G~D~~~g~~g~~~~~~--l-k~---~g~~~~v~---r~~~iSST~Ir~rI~~~ 203 (423)
++++ ++++++++.|-|--. +.....+. + +. ..+.+.+. ....||||.||+++..+
T Consensus 77 d~~~----~l~~~~~i~G~~~~~--d~~~e~~la~~nr~l~~~~etv~l~~~~~~~~ISST~IRe~~~~g 140 (171)
T 3nd5_A 77 ESAK----SLGANFLIRGIRNVK--DYEYEKDIAKMNQHLAPEIETVFLLAEEPYAHVSSSLLKEVLRFG 140 (171)
T ss_dssp HHHH----HHTCCEEEEEECSHH--HHHHHHHHHHHHHHHCTTSEEEEEECCGGGTTCCHHHHHHHHHTT
T ss_pred HHHH----HCCCCEEEECCCchh--hhHHHHHHHHHhhhhcCCccEEEEeCCccccccchHHHHHHHHcC
Confidence 6664 568999999944100 00000000 0 11 12222222 23379999999999865
No 33
>1qjc_A Phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.64A {Escherichia coli} SCOP: c.26.1.3 PDB: 1h1t_A* 1gn8_A* 1b6t_A* 3l92_A* 3l93_A
Probab=99.53 E-value=6.7e-14 Score=124.20 Aligned_cols=131 Identities=15% Similarity=0.237 Sum_probs=96.1
Q ss_pred CeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHh-hcccCeeEEcCCCCch
Q 014503 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA-CRYVDEVIIGAPWEVT 334 (423)
Q Consensus 256 ~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~-~~~Vd~Vvi~~p~~~~ 334 (423)
++++++.|+|||+|.||+.++++|++.+|.++|+++.|. .| +++++.+||+.+++. +..+|.+.+.+....+
T Consensus 1 ~~i~i~~GsFDpvH~GH~~l~~~a~~~~d~v~v~~~~~p----~k---~~~~~~~~R~~ml~~a~~~~~~v~v~~~~~~~ 73 (158)
T 1qjc_A 1 QKRAIYPGTFDPITNGHIDIVTRATQMFDHVILAIAASP----SK---KPMFTLEERVALAQQATAHLGNVEVVGFSDLM 73 (158)
T ss_dssp -CEEEEEECCTTCCHHHHHHHHHHHTTSSEEEEEEESCC----SS---CCSSCHHHHHHHHHHHTTTCTTEEEEEECSCH
T ss_pred CCEEEEEecCCCCCHHHHHHHHHHHHhCCEEEEEECCCC----CC---CCCCCHHHHHHHHHHHHhcCCCeEEcccchHH
Confidence 478999999999999999999999999999999999874 34 378999999999984 8999988875544567
Q ss_pred HHHHhhcCccEEEecCCcCCCCCCCCCCChHH-HHHhC----CeEEEeCCC--CCCCHHHHHHHHHhch
Q 014503 335 KDMITTFNICLVVHGTVSETNTPLTGQSDPYE-VAKSM----GIFQLLESP--KSITTTSVAQRIIANH 396 (423)
Q Consensus 335 ~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~-~~k~~----G~~~~i~~~--~~~Stt~Ii~RI~~~~ 396 (423)
.++++++++++++.|.|...+ + ....... ..+.. ..+..++.. ..+|||.|.++|....
T Consensus 74 ~~~l~~l~~~~~v~G~d~~~~-~--~~~~~~~~~~r~~~~~~~~i~~~~~~~~~~iSST~IR~~i~~g~ 139 (158)
T 1qjc_A 74 ANFARNQHATVLIRGLRAVAD-F--EYEMQLAHMNRHLMPELESVFLMPSKEWSFISSSLVKEVARHQG 139 (158)
T ss_dssp HHHHHHTTCCEEEEECCTTCC-H--HHHHHHHHHHHHHCTTSEEEEECCCGGGTTCCHHHHHHHHHTTC
T ss_pred HHHHHHcCCCEEEEeccchhh-h--HHHHHHHHhCccCCCCCCEEEEECCCCCCccCHHHHHHHHHcCC
Confidence 789999999999999764322 1 0000000 11221 133334433 3699999999997653
No 34
>1yum_A 'probable nicotinate-nucleotide adenylyltransferase; alpha/beta domain; HET: CIT NCN; 1.70A {Pseudomonas aeruginosa} PDB: 1yul_A* 1yun_A*
Probab=99.53 E-value=2.3e-14 Score=136.98 Aligned_cols=94 Identities=23% Similarity=0.320 Sum_probs=76.8
Q ss_pred CeEEEEecccCcCcHHHHHHHHHHHHhc--CeeEEEEecchhhhccCCCCCCcHHHHHHHHh-cCccccEEEecCCc---
Q 014503 65 RVRVYMDGCFDLMHYGHANALRQAKALG--DELVVGVVSDEEIIANKGPPVLSMEERLALVS-GLKWVDEVIANAPY--- 138 (423)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~~--d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~-~~~~VD~vi~~~p~--- 138 (423)
+++++++|+|||+|.||+.++++|++.+ |.++|+++.++. .|+.++++.++|++|++ ++.+++.+.+ .+|
T Consensus 23 ~~i~i~~GsFdPiH~GHl~li~~a~~~~~ld~v~v~~~~~~p---~K~~~~~~~~~R~~ml~~a~~~~~~v~v-~~~e~~ 98 (242)
T 1yum_A 23 KRIGLFGGTFDPVHIGHMRSAVEMAEQFALDELRLLPNARPP---HRETPQVSAAQRLAMVERAVAGVERLTV-DPRELQ 98 (242)
T ss_dssp CEEEEEEECCTTCCHHHHHHHHHHHHHHTCSEEEEEECCCCG---GGSCTTCCHHHHHHHHHHHHTTCTTEEE-CCGGGG
T ss_pred ceEEEEEeeCcHhhHHHHHHHHHHHHHcCCCEEEEEEcCCCC---CCCCCCCCHHHHHHHHHHHhcCCCeEEE-eeeeec
Confidence 4678999999999999999999999998 999999998862 34457899999999999 4667787766 334
Q ss_pred ----cccHHHHHHHHhhcCcc---EEEEcCC
Q 014503 139 ----AITEQFMNRLFNEHKID---YIIHGDD 162 (423)
Q Consensus 139 ----~~~~efl~~ll~~~~~d---~VV~G~D 162 (423)
.++.++++.+-.+++|+ ++++|.|
T Consensus 99 ~~~~sytvdtl~~l~~~~~p~~~~~fI~G~D 129 (242)
T 1yum_A 99 RDKPSYTIDTLESVRAELAADDQLFMLIGWD 129 (242)
T ss_dssp SSSSCCHHHHHHHHHHHSCTTCEEEEEEEHH
T ss_pred CCCCCCHHHHHHHHHHHhCCCCcEEEEEehh
Confidence 46778888766667677 8999986
No 35
>1vlh_A Phosphopantetheine adenylyltransferase; TM0741, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: PNS; 2.20A {Thermotoga maritima} SCOP: c.26.1.3
Probab=99.52 E-value=1.5e-14 Score=131.47 Aligned_cols=125 Identities=25% Similarity=0.293 Sum_probs=87.0
Q ss_pred CeEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHh-cCccccEEEecCCcc-ccH
Q 014503 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVS-GLKWVDEVIANAPYA-ITE 142 (423)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~-~~~~VD~vi~~~p~~-~~~ 142 (423)
..+++++|+|||+|.||+.++++|++++|+|+|++.+++ .| +++++.++|++|++ +++.++.+.. .+++ ++.
T Consensus 12 ~~i~i~~GsFdP~H~GHl~l~~~A~~~~D~viv~v~~~~----~k-k~~~~~~~R~~ml~~a~~~~~~v~v-~~~e~~tv 85 (173)
T 1vlh_A 12 HMKAVYPGSFDPITLGHVDIIKRALSIFDELVVLVTENP----RK-KCMFTLEERKKLIEEVLSDLDGVKV-DVHHGLLV 85 (173)
T ss_dssp -CEEEEEECCTTCCHHHHHHHHHHHTTCSEEEEEEECCT----TC-CCSSCHHHHHHHHHHHTTTCTTEEE-EEECSCHH
T ss_pred ceEEEEEEEECcCcHHHHHHHHHHHHHCCEEEEEEeCCC----CC-CCCCCHHHHHHHHHHHhcCCCCEEE-ecCcchHH
Confidence 347999999999999999999999999999999999974 23 48899999999999 6877776654 2232 455
Q ss_pred HHHHHHHhhcCccEEEEc----CCCCCCCCCCcHHHHHH-hC---CcEEEecc---CCCCCHHHHHHHHHhc
Q 014503 143 QFMNRLFNEHKIDYIIHG----DDPCLLPDGTDAYALAK-KV---GRYKQIKR---TEGVSSTDIVGRILSS 203 (423)
Q Consensus 143 efl~~ll~~~~~d~VV~G----~D~~~g~~g~~~~~~lk-~~---g~~~~v~r---~~~iSST~Ir~rI~~~ 203 (423)
+++ +++++++++.| .||... -...... .. .+.+.+.. ...+|||.||+++..+
T Consensus 86 d~l----~~l~~~~~i~gl~~w~d~~~~----~~~~~~~r~~~~~~~~i~l~~~~~~~~iSST~IR~~i~~g 149 (173)
T 1vlh_A 86 DYL----KKHGIKVLVRGLRAVTDYEYE----LQMALANKKLYSDLETVFLIASEKFSFISSSLVKEVALYG 149 (173)
T ss_dssp HHH----HHHTCCEEEEEECTTSCHHHH----HHHHHHHHHHSTTCEEEEEECCGGGTTCCHHHHHHHHHTT
T ss_pred HHH----HHhCCCeEEeCCCcccchhhc----cchhhcCCCCCCCCcEEEEeCCCCCCceeHHHHHHHHHcC
Confidence 655 45688999988 332110 0000111 11 12222222 2369999999999865
No 36
>2h29_A Probable nicotinate-nucleotide adenylyltransferase; NADD, namnat, nmnat; HET: DND; 2.00A {Staphylococcus aureus} PDB: 2h2a_A*
Probab=99.48 E-value=6.9e-14 Score=128.35 Aligned_cols=133 Identities=18% Similarity=0.146 Sum_probs=93.3
Q ss_pred eEEEEecccCcCcHHHHHHHHHHHHhc--CeeEEEEecchhhhccCC-CCCCcHHHHHHHHhc-CccccEEEec------
Q 014503 66 VRVYMDGCFDLMHYGHANALRQAKALG--DELVVGVVSDEEIIANKG-PPVLSMEERLALVSG-LKWVDEVIAN------ 135 (423)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~~~--d~LiVgV~sd~~i~~~K~-~pi~t~eER~~~l~~-~~~VD~vi~~------ 135 (423)
++++++|+|||+|.||+.++++|++.+ +.+++.++++.. .|+ .++++.++|++|++. ++..+.+...
T Consensus 3 ~~~v~~GsFdp~H~GH~~l~~~a~~~~~~d~v~~~~~~~~~---~k~~~~~~~~~~R~~m~~~a~~~~~~v~v~~~e~~~ 79 (189)
T 2h29_A 3 KIVLYGGQFNPIHTAHMIVASEVFHELQPDEFYFLPSFMSP---LKKHHDFIDVQHRLTMIQMIIDELGFGDICDDEIKR 79 (189)
T ss_dssp EEEEEEECCTTCCHHHHHHHHHHHHHHCCSEEEEEECSBCT---TSCCCSSCCCHHHHHHHHHHHHHHTCCEECCHHHHH
T ss_pred eEEEEEecCCcccHHHHHHHHHHHHHcCCCEEEEEECCCCC---CCcCCCCCCHHHHHHHHHHHHcCCCCEEEehHHhcC
Confidence 578999999999999999999999987 888887777653 343 578999999999984 5555544431
Q ss_pred CCccccHHHHHHHHhhcCcc---EEEEcCCC-CCCCCCCcHHHHHHhCCcEEEeccC-----------------CCCCHH
Q 014503 136 APYAITEQFMNRLFNEHKID---YIIHGDDP-CLLPDGTDAYALAKKVGRYKQIKRT-----------------EGVSST 194 (423)
Q Consensus 136 ~p~~~~~efl~~ll~~~~~d---~VV~G~D~-~~g~~g~~~~~~lk~~g~~~~v~r~-----------------~~iSST 194 (423)
....++.++++.+.+.+ |+ ++++|.|. .....|.+. +.+-....+..+.|. ..||||
T Consensus 80 ~~~syt~dtl~~l~~~~-p~~~~~~i~G~D~~~~~~~W~~~-~~i~~~~~~~v~~R~~~~~~~~~~i~~~~~~~~~ISST 157 (189)
T 2h29_A 80 GGQSYTYDTIKAFKEQH-KDSELYFVIGTDQYNQLEKWYQI-EYLKEMVTFVVVNRDKNSQNVENAMIAIQIPRVDISST 157 (189)
T ss_dssp CSBCCHHHHHHHHHHHS-TTEEEEEEEEHHHHTTGGGSTTH-HHHHHHCEEEEECCSSSCCCCCTTSEEECCCCBCCCHH
T ss_pred CCCCCHHHHHHHHHHHC-CCCcEEEEEecchhhhhccccCH-HHHHhhCcEEEEECCCCccccCCcEEEEcCCCCccCHH
Confidence 12335677887765555 66 89999883 222334443 333333455555442 259999
Q ss_pred HHHHHHHhc
Q 014503 195 DIVGRILSS 203 (423)
Q Consensus 195 ~Ir~rI~~~ 203 (423)
.||+++..+
T Consensus 158 ~IR~~i~~g 166 (189)
T 2h29_A 158 MIRQRVSEG 166 (189)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHcC
Confidence 999999865
No 37
>3h05_A Uncharacterized protein VPA0413; nucleotidylyl, transferase, MCSG, midwest center for structu genomics, PSI; 1.65A {Vibrio parahaemolyticus}
Probab=99.45 E-value=1.3e-13 Score=125.94 Aligned_cols=132 Identities=14% Similarity=0.091 Sum_probs=92.5
Q ss_pred eEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhc-Ccccc--EEEe--------
Q 014503 66 VRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKWVD--EVIA-------- 134 (423)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~-~~~VD--~vi~-------- 134 (423)
++++++|+|||+|.||+.+++ |.+..|++++++.++. +.| +++.+.++|++|++. ++... .+..
T Consensus 3 ~igi~gGsFdPih~GHl~i~~-a~~~~d~v~~~p~~~~---~~k-~~~~~~~~R~~m~~~a~~~~~~~~~~v~~~E~~l~ 77 (177)
T 3h05_A 3 KIAIFGSAFNPPSLGHKSVIE-SLSHFDLVLLEPSIAH---AWG-KNMLDYPIRCKLVDAFIKDMGLSNVQRSDLEQALY 77 (177)
T ss_dssp EEEEEEECCSSCCHHHHHHHT-TCTTSSEEEEEECC-----------CCCHHHHHHHHHHHHHHHCCTTEEECCHHHHHC
T ss_pred EEEEEEeccchhhHHHHHHHH-HHHHCCEEEEEECCCC---CCC-CCCCCHHHHHHHHHHHHhcCCCCcEEEEehhhhcc
Confidence 578999999999999999998 7777799999998752 223 578999999999985 22211 1221
Q ss_pred cCC-ccccHHHHHHHHhhcC-cc-EEEEcCC-CCCCCCCCcHHHHHHhCCcEEEeccCCCCCHHHHHHHHHhc
Q 014503 135 NAP-YAITEQFMNRLFNEHK-ID-YIIHGDD-PCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSS 203 (423)
Q Consensus 135 ~~p-~~~~~efl~~ll~~~~-~d-~VV~G~D-~~~g~~g~~~~~~lk~~g~~~~v~r~~~iSST~Ir~rI~~~ 203 (423)
... ..+|.+.++.+.+++. .+ ++++|.| +...+.|.+ ++.+-+...+..+++...||||+||++|.++
T Consensus 78 ~~~~~syT~dTl~~l~~~~p~~~~~~iiG~D~l~~l~~W~~-~~~l~~~~~~vv~~r~~~iSST~IR~~i~~g 149 (177)
T 3h05_A 78 QPGQSVTTYALLEKIQEIYPTADITFVIGPDNFFKFAKFYK-AEEITERWTVMACPEKVKIRSTDIRNALIEG 149 (177)
T ss_dssp ----CCCHHHHHHHHHHHSTTSEEEEEECHHHHHTGGGSTT-HHHHHHHSEEEECCCSSCCCHHHHHHHHHHT
T ss_pred cCCCCcchHHHHHHHHHHhcCCCeEEEEecchhhhcccchh-HHHHHHhCCEEEEcCCCCCcHHHHHHHHHcC
Confidence 012 4467778877766652 23 6889988 433455665 4455555688889998899999999999876
No 38
>1o6b_A Phosphopantetheine adenylyltransferase; structural genomics; HET: ADP; 2.20A {Bacillus subtilis} SCOP: c.26.1.3
Probab=99.44 E-value=4.4e-13 Score=120.65 Aligned_cols=131 Identities=14% Similarity=0.241 Sum_probs=94.8
Q ss_pred CeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHh-hcccCeeEEcCCCCch
Q 014503 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA-CRYVDEVIIGAPWEVT 334 (423)
Q Consensus 256 ~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~-~~~Vd~Vvi~~p~~~~ 334 (423)
++++++.|+||++|.||+.++++|++.+|.++|.+..+. .| .++++.+||+.+++. ++.+|.+.+.+....+
T Consensus 2 ~~i~i~~GsFDpvH~GH~~li~~a~~~~d~v~v~~~~~p----~k---~~l~~~~~R~~ml~~a~~~~~~v~v~~~e~~~ 74 (169)
T 1o6b_A 2 ASIAVCPGSFDPVTYGHLDIIKRGAHIFEQVYVCVLNNS----SK---KPLFSVEERCELLREVTKDIPNITVETSQGLL 74 (169)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHHHSSEEEEEECCCC----SS---CCSSCHHHHHHHHHHHHTTCTTEEEEECSSCH
T ss_pred CcEEEEEEeeCCCCHHHHHHHHHHHHhCCEEEEEECCCC----cc---CCCCCHHHHHHHHHHHHhcCCCEEEcccchHH
Confidence 478999999999999999999999999999999888552 24 478999999999985 6889988875544567
Q ss_pred HHHHhhcCccEEEecCCcCCCCCCCCCCChHHHHHhC--C-e-EEEeCCC--CCCCHHHHHHHHHhc
Q 014503 335 KDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSM--G-I-FQLLESP--KSITTTSVAQRIIAN 395 (423)
Q Consensus 335 ~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~--G-~-~~~i~~~--~~~Stt~Ii~RI~~~ 395 (423)
.+.++.+++++++.|.|...+ +. ...+.....+.. | . ...++.. ..+|||.|.+++...
T Consensus 75 ~~~l~~l~~~~~i~G~d~~~~-~~-~~~~~~~~~r~~~~~~~~i~~~~~~~~~~ISST~IR~~l~~G 139 (169)
T 1o6b_A 75 IDYARRKNAKAILRGLRAVSD-FE-YEMQGTSVNRVLDESIETFFMMANNQYSFLSSSIVKEVARYD 139 (169)
T ss_dssp HHHHHHTTCSEEEEEECSGGG-HH-HHHHHHHHHHHHCTTSEEEEEECCSTTTTCCHHHHHHHHHTT
T ss_pred HHHHHHcCCCEEEEcCccccc-hH-HHHHHHHHhccccCCCCEEEEECCCCCCcCcHHHHHHHHHcC
Confidence 788999999999999875332 10 000000111211 3 2 2223332 369999999998765
No 39
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.43 E-value=2.8e-13 Score=133.93 Aligned_cols=130 Identities=15% Similarity=0.123 Sum_probs=88.8
Q ss_pred CeEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhcCccccE----E--EecCCc
Q 014503 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDE----V--IANAPY 138 (423)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~~VD~----v--i~~~p~ 138 (423)
+++++++|+|||+|.||+.++++|++.++.++|++.+++. +.+....++.++|++|++.. ..|. + +.....
T Consensus 7 ~~~~i~~G~FdP~H~GH~~li~~a~~~~d~v~v~v~~~~~--p~~~~~~~~~~~R~~m~~~~-~~~~~~~~~~~i~~~d~ 83 (341)
T 2qjo_A 7 YQYGIYIGRFQPFHLGHLRTLNLALEKAEQVIIILGSHRV--AADTRNPWRSPERMAMIEAC-LSPQILKRVHFLTVRDW 83 (341)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHEEEEEEEEEEETC--CCCSSSCSCHHHHHHHHHTT-SCHHHHTTEEEEEEECC
T ss_pred eeEEEEEEEeCCCCHHHHHHHHHHHHhCCeEEEEECCccc--CCCCCCCCCHHHHHHHHHHH-hhhccCCeEEEEECCCC
Confidence 5789999999999999999999999999999888887753 22334458999999999974 3332 2 222111
Q ss_pred --ccc--HHHHHHHHhhcC---ccEEEEcCCCCCCCCCCcHHHHHHhC--CcEEEeccCCCCCHHHHHHHHHhc
Q 014503 139 --AIT--EQFMNRLFNEHK---IDYIIHGDDPCLLPDGTDAYALAKKV--GRYKQIKRTEGVSSTDIVGRILSS 203 (423)
Q Consensus 139 --~~~--~efl~~ll~~~~---~d~VV~G~D~~~g~~g~~~~~~lk~~--g~~~~v~r~~~iSST~Ir~rI~~~ 203 (423)
... .+|++++++.+. ++++++|.++... ....+.. -.+..++....||||.||++|.++
T Consensus 84 ~~~~~~w~~~~~~l~~~l~r~~~~~~~~g~~~~~~------~~~~~~~~~~~~~~~~~~~~iSST~IR~~l~~g 151 (341)
T 2qjo_A 84 LYSDNLWLAAVQQQVLKITGGSNSVVVLGHRKDAS------SYYLNLFPQWDYLETGHYPDFSSTAIRGAYFEG 151 (341)
T ss_dssp TTCHHHHHHHHHHHHHHHHTTCSCEEEEECCCSGG------GGGGGSCTTSEEEECCCCTTCCHHHHHHHHHHT
T ss_pred cCChHHHHHHHHHHhHHhcCCCceEEEEcCCCCCC------hHHHHhccccceeecccCCCCCcHHHHHHHHcC
Confidence 111 366655555543 7899999887321 1111222 234555545679999999999866
No 40
>1od6_A PPAT, phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.5A {Thermus thermophilus} SCOP: c.26.1.3
Probab=99.42 E-value=1.7e-12 Score=115.48 Aligned_cols=129 Identities=15% Similarity=0.216 Sum_probs=90.8
Q ss_pred EEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHH-hhcccCeeEEcCCCCchHHH
Q 014503 259 VYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVL-ACRYVDEVIIGAPWEVTKDM 337 (423)
Q Consensus 259 v~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~-~~~~Vd~Vvi~~p~~~~~~~ 337 (423)
+++.|+||++|.||+.++++|++.+|.++|.++.+. .|.. .++++.++|+.+++ ++..+|.+.+.+....+.++
T Consensus 3 ~v~~GsFdp~H~GH~~l~~~a~~~~d~v~v~~~~~p----~k~~-~~~~~~~~R~~ml~~a~~~~~~v~v~~~e~~~~~~ 77 (160)
T 1od6_A 3 VVYPGSFDPLTNGHLDVIQRASRLFEKVTVAVLENP----SKRG-QYLFSAEERLAIIREATAHLANVEAATFSGLLVDF 77 (160)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHSSEEEEEEECC----------CCSSCHHHHHHHHHHHTTTCTTEEEEEECSCHHHH
T ss_pred EEEEeeeCCCCHHHHHHHHHHHHHCCEEEEEEcCCC----CCCC-CCCCCHHHHHHHHHHHhcCCCCEEEEecCchHHHH
Confidence 889999999999999999999999999999998663 2421 37899999999997 46888987775544567789
Q ss_pred HhhcCccEEEecCCcCCCCCCCCCCChH-HHHHhC----CeEEEeCCC--CCCCHHHHHHHHHhc
Q 014503 338 ITTFNICLVVHGTVSETNTPLTGQSDPY-EVAKSM----GIFQLLESP--KSITTTSVAQRIIAN 395 (423)
Q Consensus 338 i~~~~~d~vv~G~d~~~~~~~~~~~d~~-~~~k~~----G~~~~i~~~--~~~Stt~Ii~RI~~~ 395 (423)
++++++++++.|.+...+ + ...... ...+.. ..+..++.. ..+|||.|.++|...
T Consensus 78 l~~l~~~~~v~G~d~~~~-~--~~~~~~~~~~r~~~~~~~~i~~~~~~~~~~ISST~IR~~l~~G 139 (160)
T 1od6_A 78 VRRVGAQAIVKGLRAVSD-Y--EYELQMAHLNRQLYPGLETLFILAATRYSFVSSTMVKEIARYG 139 (160)
T ss_dssp HHHTTCSEEEEEECTTSC-H--HHHHHHHHHHHHHTTTCEEEEEECCGGGTTCCHHHHHHHHHTT
T ss_pred HHHcCCCEEEEeCCcccc-h--HHHHHHHHhCcCCCCCCCEEEEeCCCCCCcccHHHHHHHHHcC
Confidence 999999999999763221 1 000000 012222 123333332 479999999998764
No 41
>1ej2_A Nicotinamide mononucleotide adenylyltransferase; dinucleotide binding fold, structural genomics, PSI; HET: NAD; 1.90A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.26.1.3 PDB: 1m8g_A* 1hyb_A* 1m8j_A* 1m8f_A* 1m8k_A*
Probab=99.42 E-value=1.1e-12 Score=119.59 Aligned_cols=126 Identities=15% Similarity=0.134 Sum_probs=84.2
Q ss_pred eEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhcC-ccc----cEEEe-cCC-c
Q 014503 66 VRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGL-KWV----DEVIA-NAP-Y 138 (423)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~-~~V----D~vi~-~~p-~ 138 (423)
++++++|+|||+|.||+.++++|++.++.++|++.+... +.|+.++++.++|++|++.. ... +.+.. +.. +
T Consensus 4 ~~~i~~G~Fdp~H~GH~~l~~~a~~~~d~v~v~v~~~~~--p~~~~~~~~~~~R~~~~~~a~~~~~~~~~~v~v~~~d~~ 81 (181)
T 1ej2_A 4 MRGLLVGRMQPFHRGHLQVIKSILEEVDELIICIGSAQL--SHSIRDPFTAGERVMMLTKALSENGIPASRYYIIPVQDI 81 (181)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHTTTCSEEEEEECSTTC--CSSSSSCSCHHHHHHHHHHHHHHTTCCGGGEEEEECCCC
T ss_pred eEEEEEEEcCCcCHHHHHHHHHHHHhCCeeEEEECCCCC--CcCCCCCCCHHHHHHHHHHHHhhCCCCCCcEEEEecCcc
Confidence 479999999999999999999999999999998844432 23345678999999999863 222 33332 111 1
Q ss_pred ccc---HHHHHHHHhhcCccEEEEcCCCCCCCCCCcHHHHHHhC-CcEEEeccCC--CCCHHHHHHHHHhc
Q 014503 139 AIT---EQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKV-GRYKQIKRTE--GVSSTDIVGRILSS 203 (423)
Q Consensus 139 ~~~---~efl~~ll~~~~~d~VV~G~D~~~g~~g~~~~~~lk~~-g~~~~v~r~~--~iSST~Ir~rI~~~ 203 (423)
... .+|++++. ..++.+++|.|+ ....++.. ..+..++... .||||.||+++..+
T Consensus 82 ~~~~~w~~~~~~l~--~~~~~~v~gr~~--------~~~~~~~~~i~~~~~~~~~~~~ISST~IR~~l~~G 142 (181)
T 1ej2_A 82 ECNALWVGHIKMLT--PPFDRVYSGNPL--------VQRLFSEDGYEVTAPPLFYRDRYSGTEVRRRMLDD 142 (181)
T ss_dssp SCHHHHHHHHHHHS--CCCSEEECCCHH--------HHHHHHHTTCCEECCCCSSTTTSSHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHC--CCCCEEEECCHH--------HHHHHHhCCeEEEecCCCccCcCcHHHHHHHHHcC
Confidence 111 24444332 367889999775 12233333 3455555433 49999999999866
No 42
>3do8_A Phosphopantetheine adenylyltransferase; protein with unknown function, structural genomics, MCSG, PSI-2, protein structure initiative; 1.60A {Archaeoglobus fulgidus}
Probab=99.36 E-value=1.8e-13 Score=121.48 Aligned_cols=125 Identities=22% Similarity=0.337 Sum_probs=82.4
Q ss_pred EEEEecccCcCcHHHHHHHHHHHHhc-CeeEEEEecchhhhccCCCCCCcHHHHHHHHhcC--cc----ccEEEecCCcc
Q 014503 67 RVYMDGCFDLMHYGHANALRQAKALG-DELVVGVVSDEEIIANKGPPVLSMEERLALVSGL--KW----VDEVIANAPYA 139 (423)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~~~-d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~--~~----VD~vi~~~p~~ 139 (423)
+++++|+||++|.||+.++++|.+++ |+|+|++++++.... +..++++.++|++|++.. +. +..+-...+|.
T Consensus 2 ~~i~gGtFDPiH~GHl~l~~~a~~~~~d~viv~v~~~~~~~k-~~~~~~~~~~R~~ml~~a~~~~~~~~~~i~~i~D~~g 80 (148)
T 3do8_A 2 KVALGGTFEPLHEGHKKLIDVAIKLGGRDITIGVTSDRMARA-RIRSVLPFAIRAENVKRYVMRKYGFEPEIVKITNPYG 80 (148)
T ss_dssp CEEEEECCSSCCHHHHHHHHHHHHHHTTCEEEEEECHHHHHH-HSCCCSCHHHHHHHHHHHHHHHHSSCCEEEEECSTTT
T ss_pred EEEEEeeCCCCCHHHHHHHHHHHHhCCCEEEEEECCCccccc-cCCCCCCHHHHHHHHHHHHhcccCCcEEEEeecCCCC
Confidence 58999999999999999999999997 899999999986532 236899999999999863 21 22222334443
Q ss_pred ccHHHHHHHHhhcCccEEEEcCCCCCCCCCCcHHHHHHhCC----cEEEeccC-----CCCCHHHHHHHHHh
Q 014503 140 ITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVG----RYKQIKRT-----EGVSSTDIVGRILS 202 (423)
Q Consensus 140 ~~~efl~~ll~~~~~d~VV~G~D~~~g~~g~~~~~~lk~~g----~~~~v~r~-----~~iSST~Ir~rI~~ 202 (423)
.+. .-++|++|++.+-..+ +....+..++.| ++..++.. ..||||.||+++.+
T Consensus 81 ~~~--------~~~~d~ivvs~Et~~~--~~~l~~~~~~~G~~~l~V~~v~~~~~~~~~~iSST~IR~~~id 142 (148)
T 3do8_A 81 KTL--------DVDFEYLVVSPETYEM--ALKINQKREELGKRKITIVKVDWMMAEDGKPISSTRIKRGEID 142 (148)
T ss_dssp TTT--------TSCCSEEEECTTTHHH--HHHHHHHHHHHTCCCCEEEEEECCC-------CCCCCCCSCCC
T ss_pred CCC--------CCCCCEEEEChhhccc--HHHHHHHHHHcCCCeeEEEEeccEEcCCCCEEEHHHHHHHHHh
Confidence 331 2468999999774221 111112223333 34444442 24999999988764
No 43
>1kam_A Deamido-NAD(+), nicotinate-nucleotide adenylyltransferase; rossman fold; 2.10A {Bacillus subtilis} SCOP: c.26.1.3 PDB: 1kaq_A*
Probab=99.36 E-value=4.5e-12 Score=116.64 Aligned_cols=96 Identities=14% Similarity=0.078 Sum_probs=72.0
Q ss_pred CeEEEEcCeeccCCHHHHHHHHHHHhcC--CEEEEEEecChhhhhccCCCCCCCCHHHHHHHHH-hhcccCeeEEcCCC-
Q 014503 256 ARVVYIDGAFDLFHAGHVEILKKARQLG--DFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVL-ACRYVDEVIIGAPW- 331 (423)
Q Consensus 256 ~~iv~~~G~FDl~H~GHi~~L~~A~~~g--d~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~-~~~~Vd~Vvi~~p~- 331 (423)
++++++.|+||++|.||+.++++|++.+ |.++++++.+.. .|+. .++++.+||+.+++ +++.+|.+.+.+..
T Consensus 7 ~~~~v~~GsFdp~H~GH~~l~~~a~~~~~~d~v~~~~~~~~~---~k~~-~~~~~~~~R~~ml~~a~~~~~~v~v~~~e~ 82 (194)
T 1kam_A 7 KKIGIFGGTFDPPHNGHLLMANEVLYQAGLDEIWFMPNQIPP---HKQN-EDYTDSFHRVEMLKLAIQSNPSFKLELVEM 82 (194)
T ss_dssp CEEEEEEECCSSCCHHHHHHHHHHHHHTTCSEEEEEECCCC-------------CHHHHHHHHHHHHTTCTTEEECCGGG
T ss_pred cEEEEEEeccccccHHHHHHHHHHHHHhCCCEEEEEECCCCC---CcCC-cCCCCHHHHHHHHHHHHcCCCCeEEeHHHh
Confidence 4789999999999999999999999998 999999987752 3432 47899999999987 58999998885421
Q ss_pred -----CchHHHHhhcCcc------EEEecCCcCCC
Q 014503 332 -----EVTKDMITTFNIC------LVVHGTVSETN 355 (423)
Q Consensus 332 -----~~~~~~i~~~~~d------~vv~G~d~~~~ 355 (423)
..+.+.++.++.. ++|.|.|+..+
T Consensus 83 ~~~~~~~t~~~l~~l~~~~p~~~~~~v~G~D~~~~ 117 (194)
T 1kam_A 83 EREGPSYTFDTVSLLKQRYPNDQLFFIIGADMIEY 117 (194)
T ss_dssp STTCCCSHHHHHHHHHHHSTTSEEEEEEETTTTTT
T ss_pred cCCCCCChHHHHHHHHHHCCCCcEEEEEecchhhh
Confidence 3466677766544 99999987554
No 44
>3gmi_A UPF0348 protein MJ0951; protein with unknown function, structural genomics, PSI, MCS protein structure initiative; 1.91A {Methanocaldococcus jannaschii}
Probab=99.36 E-value=3.6e-12 Score=127.96 Aligned_cols=94 Identities=21% Similarity=0.186 Sum_probs=75.5
Q ss_pred CCCeEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchh--hhccCCCCCCcHHHHHHHHhcCccccEEEecCCccc
Q 014503 63 KKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEE--IIANKGPPVLSMEERLALVSGLKWVDEVIANAPYAI 140 (423)
Q Consensus 63 ~~~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~--i~~~K~~pi~t~eER~~~l~~~~~VD~vi~~~p~~~ 140 (423)
..++.|+++|.|||+|.||+.+|++|++ .+ ++++|.+... +. ...+.+++.++|.+++..+ +||.|++ .||.+
T Consensus 50 ~~~~~v~~lG~FDg~H~GHq~lI~~a~~-~~-~~~~Vms~~~~~vq-rg~~~l~~~~~R~~~~~~~-GvD~vie-lpF~~ 124 (357)
T 3gmi_A 50 NKDKIVCDFTEYNPLHKGHKYALEKGKE-HG-IFISVLPGPLERSG-RGIPYFLNRYIRAEMAIRA-GADIVVE-GPPMG 124 (357)
T ss_dssp TCCCEEEEECCCTTCCHHHHHHHHHHHT-SS-EEEEEECCTTSBCT-TSSBCSSCHHHHHHHHHHH-TCSEEEE-CCCGG
T ss_pred CCCCEEEEEEecCccCHHHHHHHHHHHH-cC-CeEEEEcCchHHhc-CCCCcCCCHHHHHHHHHHC-CCCEEEE-cCchh
Confidence 3456899999999999999999999999 55 5555555433 32 2226799999999999997 9999998 66643
Q ss_pred c---HHHHHH---HHhhcCccEEEEcC
Q 014503 141 T---EQFMNR---LFNEHKIDYIIHGD 161 (423)
Q Consensus 141 ~---~efl~~---ll~~~~~d~VV~G~ 161 (423)
. ++|++. ++.++++++||+|.
T Consensus 125 ~~s~~~Fv~~~v~ll~~l~~~~iv~G~ 151 (357)
T 3gmi_A 125 IMGSGQYMRCLIKMFYSLGAEIIPRGY 151 (357)
T ss_dssp GSCHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred hCCHHHHHHHHHHHHHHcCCCEEEECC
Confidence 3 589886 78899999999998
No 45
>2qtr_A Nicotinate (nicotinamide) nucleotide adenylyltran; NAD, nucleotidyltransferase, pyridine nucleotide biosynthesi transferase; HET: NXX; 1.70A {Bacillus anthracis} PDB: 3dv2_A 3mla_A* 3hfj_A* 3mlb_A* 3mmx_A* 3e27_A* 2qtn_A* 2qtm_A*
Probab=99.35 E-value=1.2e-12 Score=119.44 Aligned_cols=134 Identities=14% Similarity=0.074 Sum_probs=94.3
Q ss_pred CeEEEEcCeeccCCHHHHHHHHHHHhcC--CEEEEEEecChhhhhccCCCCCCCCHHHHHHHHH-hhcccCeeEEcCCC-
Q 014503 256 ARVVYIDGAFDLFHAGHVEILKKARQLG--DFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVL-ACRYVDEVIIGAPW- 331 (423)
Q Consensus 256 ~~iv~~~G~FDl~H~GHi~~L~~A~~~g--d~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~-~~~~Vd~Vvi~~p~- 331 (423)
++++++.|+||++|.||+.++++|++.+ |.+++.++.+.. .|+. .++++.+||+.+++ +++.+|.+.+.+..
T Consensus 2 ~~i~i~~GsFDPvH~GH~~li~~a~~~~~~d~v~~~~~~~~~---~k~~-~~~~~~~~R~~ml~~~~~~~~~v~v~~~e~ 77 (189)
T 2qtr_A 2 RKIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPP---HKQG-RNITSVESRLQMLELATEAEEHFSICLEEL 77 (189)
T ss_dssp CEEEEEEECCSSCCHHHHC-CHHHHHHTTCSEEEEEECSSCT---TCTT-SCCCCHHHHHHHHHHHHTTCTTEEECCTGG
T ss_pred CeEEEEecCcccccHHHHHHHHHHHHHcCCCEEEEEECCCCC---CccC-CCCCCHHHHHHHHHHHhCCCCCEEEehHHh
Confidence 4789999999999999999999999998 999999997763 3432 46899999999998 47889998885432
Q ss_pred -----CchHHHHhhcCccE------EEecCCcCCCCCCCCCCChHHHHHhCCeEEEeCC-----------------CCCC
Q 014503 332 -----EVTKDMITTFNICL------VVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLES-----------------PKSI 383 (423)
Q Consensus 332 -----~~~~~~i~~~~~d~------vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~i~~-----------------~~~~ 383 (423)
..+.+.++.++..+ ++.|.|+..+ +..+. + ++.....+.+..+++ ...+
T Consensus 78 ~~~~~~~~~~~l~~l~~~~p~~~~~~v~G~D~~~~-~~~w~-~-~~~l~~~~~~~v~~r~~~~~~~~~~v~~~~~~~~~i 154 (189)
T 2qtr_A 78 SRKGPSYTYDTMLQLTKKYPDVQFHFIIGGDMVEY-LPKWY-N-IEALLDLVTFVGVARPGYKLRTPYPITTVEIPEFAV 154 (189)
T ss_dssp GSCSCCCHHHHHHHHHHHCTTCEEEEEEEHHHHHH-GGGST-T-HHHHTTTCEEEEECCTTCCCCCSSCCEEECCCCCCC
T ss_pred cCCCCCCHHHHHHHHHHHCCCCCEEEEEehhhhhh-hhccC-C-HHHHHHhCCEEEEECCCCCccCCceEEEEcCCCCcc
Confidence 45667777777555 8999875332 11122 1 222223333322221 2479
Q ss_pred CHHHHHHHHHhch
Q 014503 384 TTTSVAQRIIANH 396 (423)
Q Consensus 384 Stt~Ii~RI~~~~ 396 (423)
|||.|.+++....
T Consensus 155 SST~IR~~l~~g~ 167 (189)
T 2qtr_A 155 SSSLLRERYKEKK 167 (189)
T ss_dssp CHHHHHHHHHTTC
T ss_pred CHHHHHHHHHcCC
Confidence 9999999987654
No 46
>1f9a_A Hypothetical protein MJ0541; alpha/beta, transferase, structural genomics; HET: ATP; 2.00A {Methanocaldococcus jannaschii} SCOP: c.26.1.3
Probab=99.34 E-value=1e-11 Score=111.86 Aligned_cols=126 Identities=19% Similarity=0.305 Sum_probs=79.6
Q ss_pred EEEEecccCcCcHHHHHHHHHHHHhcCeeEEEE-ecchhhhccCCCCCCcHHHHHHHHhc-Ccccc-EEEe--cCCcccc
Q 014503 67 RVYMDGCFDLMHYGHANALRQAKALGDELVVGV-VSDEEIIANKGPPVLSMEERLALVSG-LKWVD-EVIA--NAPYAIT 141 (423)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV-~sd~~i~~~K~~pi~t~eER~~~l~~-~~~VD-~vi~--~~p~~~~ 141 (423)
+++++|+|||+|.||+.++++|++.+|+++|++ +.++ +.|+.+.++.++|++|++. ++..+ .+.. -..+...
T Consensus 2 i~i~~GsFdp~H~GH~~l~~~a~~~~d~v~v~v~~~~~---p~~~~~~~~~~~R~~m~~~~~~~~~~~v~v~~~d~l~~~ 78 (168)
T 1f9a_A 2 RGFIIGRFQPFHKGHLEVIKKIAEEVDEIIIGIGSAQK---SHTLENPFTAGERILMITQSLKDYDLTYYPIPIKDIEFN 78 (168)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHTTTCSEEEEEECSTTC---CSSSSCCSCHHHHHHHHHHHHTTSSCEEEEEECCCCSCG
T ss_pred EEEEEEecCCcCHHHHHHHHHHHHhCCeEEEEEcCCCC---CCCCCCCCCHHHHHHHHHHHHhcCCCceEEEeeCCcccH
Confidence 689999999999999999999999999999988 4443 2333456799999999985 44443 3321 1112111
Q ss_pred HHHHHHHHh-hcCccEEEEcCCCCCCCCCCcHHHHHHhCC-cEEEeccCC--CCCHHHHHHHHHhc
Q 014503 142 EQFMNRLFN-EHKIDYIIHGDDPCLLPDGTDAYALAKKVG-RYKQIKRTE--GVSSTDIVGRILSS 203 (423)
Q Consensus 142 ~efl~~ll~-~~~~d~VV~G~D~~~g~~g~~~~~~lk~~g-~~~~v~r~~--~iSST~Ir~rI~~~ 203 (423)
..+.+.+.+ ...++.++.|.++ ....+...+ .+...+..+ .||||.||+++..+
T Consensus 79 ~~w~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~i~~~~~~~~~~~~ISST~IR~~~~~g 136 (168)
T 1f9a_A 79 SIWVSYVESLTPPFDIVYSGNPL--------VRVLFEERGYEVKRPEMFNRKEYSGTEIRRRMLNG 136 (168)
T ss_dssp GGHHHHHHHHSCCCSEEECCCHH--------HHHHHHHTTCEEECCCCCSTTTSSHHHHHHHHHHT
T ss_pred HHHHHHHHHhccCCCEEEECcHH--------HHHhhhhcCcEEEeCCccccCcccHHHHHHHHHcC
Confidence 223221111 2356777777543 112233222 334444433 59999999999865
No 47
>1kqn_A Nmnat, nicotinamide mononucleotide adenylyl transferase; nucleotidyltransferase superfamily; HET: NAD; 2.20A {Homo sapiens} SCOP: c.26.1.3 PDB: 1kqo_A* 1kr2_A* 1kku_A 1gzu_A*
Probab=99.31 E-value=7.2e-12 Score=122.11 Aligned_cols=86 Identities=15% Similarity=0.103 Sum_probs=59.5
Q ss_pred CeEEEEecccCcCcHHHHHHHHHHHHhcC--e---eEEEE-ecchhhhccCCCCCCcHHHHHHHHhc-CccccEEEec--
Q 014503 65 RVRVYMDGCFDLMHYGHANALRQAKALGD--E---LVVGV-VSDEEIIANKGPPVLSMEERLALVSG-LKWVDEVIAN-- 135 (423)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~~d--~---LiVgV-~sd~~i~~~K~~pi~t~eER~~~l~~-~~~VD~vi~~-- 135 (423)
+++++++|+|||+|.||+.++++|++.++ . +++++ .+.. ....| +++++.++|++|++. +...+.+...
T Consensus 8 ~~i~i~gGsFDPiH~GHl~l~~~a~~~~~~d~~~~vvv~~f~P~~-~~~~K-~~l~s~~~R~~ml~~ai~~~~~~~v~~~ 85 (279)
T 1kqn_A 8 EVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVG-DAYKK-KGLIPAYHRVIMAELATKNSKWVEVDTW 85 (279)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHHHHTSSEEEEEEEEEECC-GGGCC-TTCCCHHHHHHHHHHHTTTCSSEEECCT
T ss_pred ceEEEEEeeecHhhHHHHHHHHHHHHHhcccCCceEEEEEEcCCC-CCccc-cCCCCHHHHHHHHHHHhcCCCcEEEecc
Confidence 56889999999999999999999999863 2 54332 2222 11233 568999999999985 4566665542
Q ss_pred ----CCccccHHHHHHHHhhc
Q 014503 136 ----APYAITEQFMNRLFNEH 152 (423)
Q Consensus 136 ----~p~~~~~efl~~ll~~~ 152 (423)
..+.+|.+.++.+-+++
T Consensus 86 E~~~~~~syTidtL~~l~~~~ 106 (279)
T 1kqn_A 86 ESLQKEWKETLKVLRHHQEKL 106 (279)
T ss_dssp GGGCSSCCCHHHHHHHHHHHH
T ss_pred ccccCCCCcHHHHHHHHHHHH
Confidence 23455667777665666
No 48
>3do8_A Phosphopantetheine adenylyltransferase; protein with unknown function, structural genomics, MCSG, PSI-2, protein structure initiative; 1.60A {Archaeoglobus fulgidus}
Probab=99.30 E-value=3.3e-13 Score=119.70 Aligned_cols=128 Identities=20% Similarity=0.290 Sum_probs=83.7
Q ss_pred EEEEcCeeccCCHHHHHHHHHHHhcC-CEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHh-h-cc----cCeeEEcCC
Q 014503 258 VVYIDGAFDLFHAGHVEILKKARQLG-DFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA-C-RY----VDEVIIGAP 330 (423)
Q Consensus 258 iv~~~G~FDl~H~GHi~~L~~A~~~g-d~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~-~-~~----Vd~Vvi~~p 330 (423)
.|+++|+|||+|.||+.++++|++++ |+|+|++++|+..++ + ++|+++.+||+.+++. + +. +.-+-+.++
T Consensus 2 ~~i~gGtFDPiH~GHl~l~~~a~~~~~d~viv~v~~~~~~~k-~--~~~~~~~~~R~~ml~~a~~~~~~~~~~i~~i~D~ 78 (148)
T 3do8_A 2 KVALGGTFEPLHEGHKKLIDVAIKLGGRDITIGVTSDRMARA-R--IRSVLPFAIRAENVKRYVMRKYGFEPEIVKITNP 78 (148)
T ss_dssp CEEEEECCSSCCHHHHHHHHHHHHHHTTCEEEEEECHHHHHH-H--SCCCSCHHHHHHHHHHHHHHHHSSCCEEEEECST
T ss_pred EEEEEeeCCCCCHHHHHHHHHHHHhCCCEEEEEECCCccccc-c--CCCCCCHHHHHHHHHHHHhcccCCcEEEEeecCC
Confidence 48899999999999999999999997 999999999986632 2 2689999999988765 4 32 333334555
Q ss_pred CCchHHHHhhcCccEEEecCCcCCCCCCCCCCChHHHHHhCCe----EEEeCC-----CCCCCHHHHHHHHHhchH
Q 014503 331 WEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGI----FQLLES-----PKSITTTSVAQRIIANHE 397 (423)
Q Consensus 331 ~~~~~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~----~~~i~~-----~~~~Stt~Ii~RI~~~~~ 397 (423)
+..+. .-.+|++|-+.+-..+ ........+..|. +..++. ...+|||.|.+++++.+.
T Consensus 79 ~g~~~----~~~~d~ivvs~Et~~~-----~~~l~~~~~~~G~~~l~V~~v~~~~~~~~~~iSST~IR~~~id~~g 145 (148)
T 3do8_A 79 YGKTL----DVDFEYLVVSPETYEM-----ALKINQKREELGKRKITIVKVDWMMAEDGKPISSTRIKRGEIDRYG 145 (148)
T ss_dssp TTTTT----TSCCSEEEECTTTHHH-----HHHHHHHHHHHTCCCCEEEEEECCC-------CCCCCCCSCCC---
T ss_pred CCCCC----CCCCCEEEEChhhccc-----HHHHHHHHHHcCCCeeEEEEeccEEcCCCCEEEHHHHHHHHHhhcC
Confidence 55442 3678889877653221 1111223344454 344432 245899999888877653
No 49
>1mrz_A Riboflavin kinase/FMN adenylyltransferase; rossmann fold, flavin binding domain, 6-stranded beta barrel nucleotide binding domain; HET: CIT; 1.90A {Thermotoga maritima} SCOP: b.43.5.1 c.26.1.3 PDB: 1s4m_A* 1t6x_A* 1t6y_A* 1t6z_A* 2i1l_A
Probab=99.27 E-value=8.9e-12 Score=122.22 Aligned_cols=134 Identities=13% Similarity=0.060 Sum_probs=95.0
Q ss_pred EEEcCeeccCCHHHHHHHHHHHhcCCEE---EEEEecChhhhhccC-CCCCCCCHHHHHHHHHhhcccCeeEEc---CCC
Q 014503 259 VYIDGAFDLFHAGHVEILKKARQLGDFL---LVGIYTDQIVSEHRG-SYHPIMHLHERSLSVLACRYVDEVIIG---APW 331 (423)
Q Consensus 259 v~~~G~FDl~H~GHi~~L~~A~~~gd~L---iVgv~~D~~v~~~Kg-~~~pi~~~~ER~~~v~~~~~Vd~Vvi~---~p~ 331 (423)
|++.|+||.+|.||..+|++|++++|.+ .|.++.|....-.++ +.+|+++++||+.+++++. ++.|+.+ + .
T Consensus 2 vvtiG~FDgvH~GH~~ll~~a~~~a~~~~~~~vVvtFdphP~~l~~~~~~~l~~~~eR~~ll~~lg-~~~v~~F~~~a-~ 79 (293)
T 1mrz_A 2 VVSIGVFDGVHIGHQKVLRTMKEIAFFRKDDSLIYTISYPPEYFLPDFPGLLMTVESRVEMLSRYA-RTVVLDFFRIK-D 79 (293)
T ss_dssp CEEEECCTTCCHHHHHHHHHHHHHHHHHTCCCEEEEESSCGGGGSTTCCCBSSCHHHHHHHHTTTS-CEEEECHHHHT-T
T ss_pred EEEEeeCccccHHHHHHHHHHHHHHHHcCCeEEEEEecCCHHHhCCCCCCCCCCHHHHHHHHHhCC-CEEEEEhHHhh-c
Confidence 6788999999999999999999998763 355665642211222 2368999999999999998 6666654 2 2
Q ss_pred CchHHHHhh--cCccEEEecCCcCCCCCCCCCCChHHHHHhCCeEEEeCC----CCCCCHHHHHHHHHhch
Q 014503 332 EVTKDMITT--FNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLES----PKSITTTSVAQRIIANH 396 (423)
Q Consensus 332 ~~~~~~i~~--~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~i~~----~~~~Stt~Ii~RI~~~~ 396 (423)
..+.++++. ++++++|.|.||.... ....+...+.+.++.+..++. ...+|||.|.+.|.+..
T Consensus 80 ls~~~Fi~~ill~~~~iVvG~Df~fG~--~~~g~~~~L~~~G~~V~~v~~~~~~~~~iSST~IR~~L~~G~ 148 (293)
T 1mrz_A 80 LTPEGFVERYLSGVSAVVVGRDFRFGK--NASGNASFLRKKGVEVYEIEDVVVQGKRVSSSLIRNLVQEGR 148 (293)
T ss_dssp CCHHHHHHHHCTTCCEEEEETTCCBSG--GGCBCHHHHHHTTCEEEEECCCEETTEECCHHHHHHHHHTTC
T ss_pred CCHHHHHHHHhcCCCEEEECCCCCCCC--CCCCCHHHHHhCCCEEEEECCEEeCCccccHhHHHHHHhcCc
Confidence 345778888 9999999999986542 111233333334456777764 35799999988886653
No 50
>1nup_A FKSG76; NAD biosynthesis, mitochondria, pyridine adenylyltransferase catalysis, transferase; HET: NMN; 1.90A {Homo sapiens} SCOP: c.26.1.3 PDB: 1nuq_A* 1nur_A 1nus_A* 1nut_A* 1nuu_A*
Probab=99.26 E-value=1.5e-11 Score=118.10 Aligned_cols=88 Identities=14% Similarity=0.088 Sum_probs=58.9
Q ss_pred CeEEEEecccCcCcHHHHHHHHHHHHhcCe----eEEEEecchhhhccCCCCCCcHHHHHHHHhc-CccccEEEe-----
Q 014503 65 RVRVYMDGCFDLMHYGHANALRQAKALGDE----LVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKWVDEVIA----- 134 (423)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~----LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~-~~~VD~vi~----- 134 (423)
+++++++|+|||+|.||+.++++|++.++. .+|++...+.....+++++++.++|++|++. +...+.+..
T Consensus 6 ~~i~i~~GsFdPiH~GHl~l~~~a~~~~~~~~~~~vv~~~~~p~~~~~~k~~~~~~~~R~~m~~~ai~~~~~~~v~~~E~ 85 (252)
T 1nup_A 6 PVVLLACGSFNPITNMHLRMFEVARDHLHQTGMYQVIQGIISPVNDTYGKKDLAASHHRVAMARLALQTSDWIRVDPWES 85 (252)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHHHHTTSEEEEEEEEEECCTTCSSSCCCCHHHHHHHHHHHGGGCSSEEECCHHH
T ss_pred ceEEEEEecCcHhhHHHHHHHHHHHHHhcccCCceEEEEEEeCCCCcccCCCCCCHHHHHHHHHHHhcCCCceEeehHHh
Confidence 568999999999999999999999998742 4443333332112222468999999999984 333333332
Q ss_pred -cCCccccHHHHHHHHhhc
Q 014503 135 -NAPYAITEQFMNRLFNEH 152 (423)
Q Consensus 135 -~~p~~~~~efl~~ll~~~ 152 (423)
...+.+|.+.++.+-+++
T Consensus 86 ~~~~~syTidtL~~l~~~~ 104 (252)
T 1nup_A 86 EQAQWMETVKVLRHHHSKL 104 (252)
T ss_dssp HSSSCCCHHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHH
Confidence 234556667777665555
No 51
>1yum_A 'probable nicotinate-nucleotide adenylyltransferase; alpha/beta domain; HET: CIT NCN; 1.70A {Pseudomonas aeruginosa} PDB: 1yul_A* 1yun_A*
Probab=99.25 E-value=5.2e-11 Score=113.69 Aligned_cols=92 Identities=21% Similarity=0.196 Sum_probs=75.5
Q ss_pred CCeEEEEcCeeccCCHHHHHHHHHHHhcC--CEEEEEEecChhhhhccCCCCCCCCHHHHHHHHH-hhcccCeeEEcCCC
Q 014503 255 NARVVYIDGAFDLFHAGHVEILKKARQLG--DFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVL-ACRYVDEVIIGAPW 331 (423)
Q Consensus 255 ~~~iv~~~G~FDl~H~GHi~~L~~A~~~g--d~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~-~~~~Vd~Vvi~~p~ 331 (423)
.++++++.|+|||+|.||+.++++|++.+ |.++|+++.|.. .|+ .++++.++|+.+++ +++.++.|.+.+..
T Consensus 22 ~~~i~i~~GsFdPiH~GHl~li~~a~~~~~ld~v~v~~~~~~p---~K~--~~~~~~~~R~~ml~~a~~~~~~v~v~~~e 96 (242)
T 1yum_A 22 GKRIGLFGGTFDPVHIGHMRSAVEMAEQFALDELRLLPNARPP---HRE--TPQVSAAQRLAMVERAVAGVERLTVDPRE 96 (242)
T ss_dssp CCEEEEEEECCTTCCHHHHHHHHHHHHHHTCSEEEEEECCCCG---GGS--CTTCCHHHHHHHHHHHHTTCTTEEECCGG
T ss_pred CceEEEEEeeCcHhhHHHHHHHHHHHHHcCCCEEEEEEcCCCC---CCC--CCCCCHHHHHHHHHHHhcCCCeEEEeeee
Confidence 36789999999999999999999999988 999999998852 242 47899999999998 68899998885522
Q ss_pred ------CchHHHHhhc----Ccc---EEEecCC
Q 014503 332 ------EVTKDMITTF----NIC---LVVHGTV 351 (423)
Q Consensus 332 ------~~~~~~i~~~----~~d---~vv~G~d 351 (423)
..+.+.++.+ +|+ +++.|.|
T Consensus 97 ~~~~~~sytvdtl~~l~~~~~p~~~~~fI~G~D 129 (242)
T 1yum_A 97 LQRDKPSYTIDTLESVRAELAADDQLFMLIGWD 129 (242)
T ss_dssp GGSSSSCCHHHHHHHHHHHSCTTCEEEEEEEHH
T ss_pred ecCCCCCCHHHHHHHHHHHhCCCCcEEEEEehh
Confidence 4677777665 677 7888874
No 52
>1k4m_A NAMN adenylyltransferase; nucleotidyltransferase; HET: NAD CIT; 1.90A {Escherichia coli} SCOP: c.26.1.3 PDB: 1k4k_A*
Probab=99.21 E-value=3.6e-11 Score=112.25 Aligned_cols=91 Identities=16% Similarity=0.133 Sum_probs=73.1
Q ss_pred eE-EEEcCeeccCCHHHHHHHHHHHhcC--CEEEEEEecChhhhhccCCCCCCCCHHHHHHHHH-hhcccCeeEEcCC--
Q 014503 257 RV-VYIDGAFDLFHAGHVEILKKARQLG--DFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVL-ACRYVDEVIIGAP-- 330 (423)
Q Consensus 257 ~i-v~~~G~FDl~H~GHi~~L~~A~~~g--d~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~-~~~~Vd~Vvi~~p-- 330 (423)
++ +++.|+||++|.||+.++++|++.+ |.+++.++.+.. .|. .++++.+||+.+++ +++.+|.|.+.+.
T Consensus 3 ~i~~i~~GsFdPiH~GH~~l~~~a~~~~~~d~v~~~~~~~~~---~k~--~~~~~~~~R~~ml~~a~~~~~~v~v~~~e~ 77 (213)
T 1k4m_A 3 SLQALFGGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVPP---HRP--QPEANSVQRKHMLELAIADKPLFTLDEREL 77 (213)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHHHHTCSCEEEEECSSCT---TSC--CCSSCHHHHHHHHHHHHTTCTTEEECCHHH
T ss_pred eEEEEEEeCcCCCCHHHHHHHHHHHHHcCCCEEEEEECCCCC---CCC--CCCCCHHHHHHHHHHHhccCCCEEEeHHHh
Confidence 46 8999999999999999999999987 899998887753 242 36899999999997 7889999888532
Q ss_pred ----CCchHHHHhhc----Ccc---EEEecCCc
Q 014503 331 ----WEVTKDMITTF----NIC---LVVHGTVS 352 (423)
Q Consensus 331 ----~~~~~~~i~~~----~~d---~vv~G~d~ 352 (423)
...+.++++.+ +|+ +++.|.|.
T Consensus 78 ~~~~~s~t~~~l~~l~~~~~~~~~~~~i~G~D~ 110 (213)
T 1k4m_A 78 KRNAPSYTAQTLKEWRQEQGPDVPLAFIIGQDS 110 (213)
T ss_dssp HCSSCCCHHHHHHHHHHHHCTTSCEEEEEEHHH
T ss_pred cCCCCCcHHHHHHHHHHHhCCCCcEEEEEehhh
Confidence 13456666655 899 89999753
No 53
>2ejc_A Pantoate--beta-alanine ligase; X-RAY diffraction, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Thermotoga maritima}
Probab=99.19 E-value=1e-12 Score=127.78 Aligned_cols=112 Identities=14% Similarity=0.185 Sum_probs=78.4
Q ss_pred EEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCC---CCCCcHHHHHHHHhcCccccEEEecCCc-ccc-
Q 014503 67 RVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKG---PPVLSMEERLALVSGLKWVDEVIANAPY-AIT- 141 (423)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~---~pi~t~eER~~~l~~~~~VD~vi~~~p~-~~~- 141 (423)
+|.+.|+||++|.||+.+|++|++.++.++|++.+++.-...+. +.+.+.++|+++++++ +||.++. .++ .++
T Consensus 23 ~V~~vgtfdgLH~GH~sLI~~A~~~ad~vVVSffvnP~qf~~~ed~~~yp~tle~d~~lL~~~-GVD~vf~-p~~~~m~p 100 (280)
T 2ejc_A 23 TIGFVPTMGYLHEGHLSLVRRARAENDVVVVSIFVNPTQFGPNEDYERYPRDFERDRKLLEKE-NVDCIFH-PSVEEMYP 100 (280)
T ss_dssp CEEEEEECSCCCHHHHHHHHHHHHHSSEEEEEECCCGGGCCTTSCGGGSCCCHHHHHHHHHTT-TCSEEEC-CCHHHHSC
T ss_pred EEEEEcCCccccHHHHHHHHHHHHhCCEEEEEEeCChHHhcCCcccccCCCCHHHHHHHHHHC-CCCEEEe-CCHHHCCC
Confidence 46666999999999999999999999999999977665322111 3467899999999998 6999997 222 111
Q ss_pred HHHH--------HH-HHhhcCccE------------EEEc-CCCCCCCCCCcHHHHHHhCC
Q 014503 142 EQFM--------NR-LFNEHKIDY------------IIHG-DDPCLLPDGTDAYALAKKVG 180 (423)
Q Consensus 142 ~efl--------~~-ll~~~~~d~------------VV~G-~D~~~g~~g~~~~~~lk~~g 180 (423)
++|. .. +..+++|.+ .++| +|++||.+..+....+++.+
T Consensus 101 ~~f~~~v~~~~~~~~l~G~~rp~hF~Gv~tvv~kLf~iv~p~~~~FG~kd~qq~~~l~~~~ 161 (280)
T 2ejc_A 101 PDFSTYVEETKLSKHLCGRSRPGHFRGVCTVVTKLFNIVKPHRAYFGQKDAQQFRVLRRMV 161 (280)
T ss_dssp TTCCCCCCCCSGGGTTTGGGSTTHHHHHHHHHHHHHHHHCCSEEEEEGGGHHHHHHHHHHH
T ss_pred cCceEEEEcCCcceEEecCCCCCeecceEEEEeeeceeccCceEEeCCCCCcCHHHHHHHH
Confidence 1232 11 112233333 4444 48999988888888887655
No 54
>3h05_A Uncharacterized protein VPA0413; nucleotidylyl, transferase, MCSG, midwest center for structu genomics, PSI; 1.65A {Vibrio parahaemolyticus}
Probab=99.14 E-value=7.3e-11 Score=107.58 Aligned_cols=131 Identities=13% Similarity=0.075 Sum_probs=85.8
Q ss_pred CeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHh-hcccC--eeEEcC---
Q 014503 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA-CRYVD--EVIIGA--- 329 (423)
Q Consensus 256 ~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~-~~~Vd--~Vvi~~--- 329 (423)
+++++++|+|||+|.||+.+++ |.+.+|.|++++..+. ..| ++.++.++|+.+++. ++..+ .+.+.+
T Consensus 2 ~~igi~gGsFdPih~GHl~i~~-a~~~~d~v~~~p~~~~---~~k---~~~~~~~~R~~m~~~a~~~~~~~~~~v~~~E~ 74 (177)
T 3h05_A 2 KKIAIFGSAFNPPSLGHKSVIE-SLSHFDLVLLEPSIAH---AWG---KNMLDYPIRCKLVDAFIKDMGLSNVQRSDLEQ 74 (177)
T ss_dssp CEEEEEEECCSSCCHHHHHHHT-TCTTSSEEEEEECC-------------CCCHHHHHHHHHHHHHHHCCTTEEECCHHH
T ss_pred cEEEEEEeccchhhHHHHHHHH-HHHHCCEEEEEECCCC---CCC---CCCCCHHHHHHHHHHHHhcCCCCcEEEEehhh
Confidence 4789999999999999999998 7777799999998762 223 478999999988865 55432 344321
Q ss_pred -----C-CCchHHHHhh---cCcc---EEEecCCcCCCCCCCCCCChHHHHHhCCeEEEeCCCCCCCHHHHHHHHHhch
Q 014503 330 -----P-WEVTKDMITT---FNIC---LVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIANH 396 (423)
Q Consensus 330 -----p-~~~~~~~i~~---~~~d---~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~i~~~~~~Stt~Ii~RI~~~~ 396 (423)
. ...|.+.++. .-|+ +++.|.|...+ +..|. +...+.+ ...++.+++...+|+|.|.++|.+.+
T Consensus 75 ~l~~~~~~syT~dTl~~l~~~~p~~~~~~iiG~D~l~~-l~~W~-~~~~l~~-~~~~vv~~r~~~iSST~IR~~i~~g~ 150 (177)
T 3h05_A 75 ALYQPGQSVTTYALLEKIQEIYPTADITFVIGPDNFFK-FAKFY-KAEEITE-RWTVMACPEKVKIRSTDIRNALIEGK 150 (177)
T ss_dssp HHC----CCCHHHHHHHHHHHSTTSEEEEEECHHHHHT-GGGST-THHHHHH-HSEEEECCCSSCCCHHHHHHHHHHTC
T ss_pred hcccCCCCcchHHHHHHHHHHhcCCCeEEEEecchhhh-cccch-hHHHHHH-hCCEEEEcCCCCCcHHHHHHHHHcCC
Confidence 1 2234444443 3343 46889875332 21222 2333333 34566778888999999999998764
No 55
>2h29_A Probable nicotinate-nucleotide adenylyltransferase; NADD, namnat, nmnat; HET: DND; 2.00A {Staphylococcus aureus} PDB: 2h2a_A*
Probab=99.11 E-value=1.7e-10 Score=105.63 Aligned_cols=134 Identities=15% Similarity=0.080 Sum_probs=89.8
Q ss_pred CeEEEEcCeeccCCHHHHHHHHHHHhcC--CEEEEEEecChhhhhccCCCCCCCCHHHHHHHHH-hhcccCeeEEcC---
Q 014503 256 ARVVYIDGAFDLFHAGHVEILKKARQLG--DFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVL-ACRYVDEVIIGA--- 329 (423)
Q Consensus 256 ~~iv~~~G~FDl~H~GHi~~L~~A~~~g--d~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~-~~~~Vd~Vvi~~--- 329 (423)
++++++.|+|||+|.||+.++++|++.+ |.+++..+.+.. .|+. .|+++.++|+.+++ +++..+.|.+.+
T Consensus 2 ~~~~v~~GsFdp~H~GH~~l~~~a~~~~~~d~v~~~~~~~~~---~k~~-~~~~~~~~R~~m~~~a~~~~~~v~v~~~e~ 77 (189)
T 2h29_A 2 KKIVLYGGQFNPIHTAHMIVASEVFHELQPDEFYFLPSFMSP---LKKH-HDFIDVQHRLTMIQMIIDELGFGDICDDEI 77 (189)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHHCCSEEEEEECSBCT---TSCC-CSSCCCHHHHHHHHHHHHHHTCCEECCHHH
T ss_pred ceEEEEEecCCcccHHHHHHHHHHHHHcCCCEEEEEECCCCC---CCcC-CCCCCHHHHHHHHHHHHcCCCCEEEehHHh
Confidence 3689999999999999999999999887 888887777753 3432 57899999998887 588888877743
Q ss_pred ---CCCchHHHHhh---cCcc---EEEecCCcCCCCCCCCCCChHHHHHhCCeEEEeCC-----------------CCCC
Q 014503 330 ---PWEVTKDMITT---FNIC---LVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLES-----------------PKSI 383 (423)
Q Consensus 330 ---p~~~~~~~i~~---~~~d---~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~i~~-----------------~~~~ 383 (423)
....+.+.++. ..|+ +++.|.|...+ +..|.. ...+.+.. .+..+++ ...+
T Consensus 78 ~~~~~syt~dtl~~l~~~~p~~~~~~i~G~D~~~~-~~~W~~-~~~i~~~~-~~~v~~R~~~~~~~~~~i~~~~~~~~~I 154 (189)
T 2h29_A 78 KRGGQSYTYDTIKAFKEQHKDSELYFVIGTDQYNQ-LEKWYQ-IEYLKEMV-TFVVVNRDKNSQNVENAMIAIQIPRVDI 154 (189)
T ss_dssp HHCSBCCHHHHHHHHHHHSTTEEEEEEEEHHHHTT-GGGSTT-HHHHHHHC-EEEEECCSSSCCCCCTTSEEECCCCBCC
T ss_pred cCCCCCCHHHHHHHHHHHCCCCcEEEEEecchhhh-hccccC-HHHHHhhC-cEEEEECCCCccccCCcEEEEcCCCCcc
Confidence 12245555543 3466 88999875432 212221 11222221 2222222 2479
Q ss_pred CHHHHHHHHHhch
Q 014503 384 TTTSVAQRIIANH 396 (423)
Q Consensus 384 Stt~Ii~RI~~~~ 396 (423)
|+|.|.+++....
T Consensus 155 SST~IR~~i~~g~ 167 (189)
T 2h29_A 155 SSTMIRQRVSEGK 167 (189)
T ss_dssp CHHHHHHHHHTTC
T ss_pred CHHHHHHHHHcCC
Confidence 9999999987653
No 56
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1
Probab=99.10 E-value=6.7e-10 Score=111.46 Aligned_cols=129 Identities=21% Similarity=0.214 Sum_probs=83.1
Q ss_pred CeEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhh-----hccCCCCCCcHHHHHHHHhc-CccccE-EE----
Q 014503 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEI-----IANKGPPVLSMEERLALVSG-LKWVDE-VI---- 133 (423)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i-----~~~K~~pi~t~eER~~~l~~-~~~VD~-vi---- 133 (423)
++++++.|+|||+|.||+.++++|.+++|+|+|+|.+++.. ...+.+..++.+||++|++. ++..+. +.
T Consensus 2 ~~~~i~~GtFdP~h~GHl~~~~~a~~~~d~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~R~~m~~~~~~~~~~~~~v~~~ 81 (365)
T 1lw7_A 2 KKVGVIFGKFYPVHTGHINMIYEAFSKVDELHVIVCSDTVRDLKLFYDSKMKRMPTVQDRLRWMQQIFKYQKNQIFIHHL 81 (365)
T ss_dssp CCEEEEEECCSSCCHHHHHHHHHHHTTCSEEEEEEEECHHHHHHHHHHTTCSSCCCHHHHHHHHHHHTSTTTTTEEEEEE
T ss_pred CcEEEEEEeeCCCCHHHHHHHHHHHHHCCEEEEEECCCCccccccccccccCCCCCHHHHHHHHHHHhhcCCCcEEEEEe
Confidence 35799999999999999999999999999999999998853 11111234999999999974 344332 11
Q ss_pred ecCCccc----c---HHHHHHHHh--hcCccEEEEcCCCCCCCCCCcHHHHHHhCC-cEEEec--c-CCCCCHHHHHHHH
Q 014503 134 ANAPYAI----T---EQFMNRLFN--EHKIDYIIHGDDPCLLPDGTDAYALAKKVG-RYKQIK--R-TEGVSSTDIVGRI 200 (423)
Q Consensus 134 ~~~p~~~----~---~efl~~ll~--~~~~d~VV~G~D~~~g~~g~~~~~~lk~~g-~~~~v~--r-~~~iSST~Ir~rI 200 (423)
.+.+... . ...+..++. .+++++++.++++. .....+..+ +++.++ + ...||||.||+..
T Consensus 82 ~~~~~~~y~~~~~~~~~~~~~~i~~~~~~~~~~~~~e~~~-------~~~~~~~~~~e~v~l~~~~~~~~iSsT~IRe~~ 154 (365)
T 1lw7_A 82 VEDGIPSYPNGWQSWSEAVKTLFHEKHFEPSIVFSSEPQD-------KAPYEKYLGLEVSLVDPDRTFFNVSATKIRTTP 154 (365)
T ss_dssp ECSSSCCTTSCHHHHHHHHHHHHHHTTCCCSEEECSCGGG-------HHHHHHHTCCEEECCCSSCCSSCCCHHHHHHCG
T ss_pred ccCCCCCCchHHHHHHHHHHHHhhccCCCCcEEEECCCCC-------HHHHHHHcCCceEEeCCcccCCCCCHHHHHhCh
Confidence 1111111 0 123333444 36788877676542 112333333 455554 2 3479999999864
No 57
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1
Probab=99.09 E-value=2.3e-10 Score=114.84 Aligned_cols=125 Identities=17% Similarity=0.210 Sum_probs=81.1
Q ss_pred CeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhh-----hccCCCCCCCCHHHHHHHHH-hhcccCe-eEEc
Q 014503 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVS-----EHRGSYHPIMHLHERSLSVL-ACRYVDE-VIIG 328 (423)
Q Consensus 256 ~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~-----~~Kg~~~pi~~~~ER~~~v~-~~~~Vd~-Vvi~ 328 (423)
++++++.|+|||+|.||+.++++|++++|+|+|++.+++.-. ..+.+ .| ++.+||+.+++ +++..+. |.+.
T Consensus 2 ~~~~i~~GtFdP~h~GHl~~~~~a~~~~d~v~v~~~~~~~~~~~~~~~~~~~-~~-~~~~~R~~m~~~~~~~~~~~~~v~ 79 (365)
T 1lw7_A 2 KKVGVIFGKFYPVHTGHINMIYEAFSKVDELHVIVCSDTVRDLKLFYDSKMK-RM-PTVQDRLRWMQQIFKYQKNQIFIH 79 (365)
T ss_dssp CCEEEEEECCSSCCHHHHHHHHHHHTTCSEEEEEEEECHHHHHHHHHHTTCS-SC-CCHHHHHHHHHHHTSTTTTTEEEE
T ss_pred CcEEEEEEeeCCCCHHHHHHHHHHHHHCCEEEEEECCCCccccccccccccC-CC-CCHHHHHHHHHHHhhcCCCcEEEE
Confidence 578999999999999999999999999999999999997431 11112 35 89999998885 5677665 4442
Q ss_pred CC--CC--c-------hHH----HHh--hcCccEEEecCCcCCCCCCCCCCChHHHHHhCC-eEEEeC--C-CCCCCHHH
Q 014503 329 AP--WE--V-------TKD----MIT--TFNICLVVHGTVSETNTPLTGQSDPYEVAKSMG-IFQLLE--S-PKSITTTS 387 (423)
Q Consensus 329 ~p--~~--~-------~~~----~i~--~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G-~~~~i~--~-~~~~Stt~ 387 (423)
.. .. . -.+ +++ .+++++++.+..+.. ....+..| ..++++ + ...+|+|.
T Consensus 80 ~~~~~~~~~y~~~~~~~~~~~~~~i~~~~~~~~~~~~~e~~~~----------~~~~~~~~~e~v~l~~~~~~~~iSsT~ 149 (365)
T 1lw7_A 80 HLVEDGIPSYPNGWQSWSEAVKTLFHEKHFEPSIVFSSEPQDK----------APYEKYLGLEVSLVDPDRTFFNVSATK 149 (365)
T ss_dssp EEECSSSCCTTSCHHHHHHHHHHHHHHTTCCCSEEECSCGGGH----------HHHHHHTCCEEECCCSSCCSSCCCHHH
T ss_pred EeccCCCCCCchHHHHHHHHHHHHhhccCCCCcEEEECCCCCH----------HHHHHHcCCceEEeCCcccCCCCCHHH
Confidence 11 00 0 011 233 357777775543210 12234445 344555 2 35799998
Q ss_pred HHHHH
Q 014503 388 VAQRI 392 (423)
Q Consensus 388 Ii~RI 392 (423)
|.+..
T Consensus 150 IRe~~ 154 (365)
T 1lw7_A 150 IRTTP 154 (365)
T ss_dssp HHHCG
T ss_pred HHhCh
Confidence 87753
No 58
>2x0k_A Riboflavin biosynthesis protein RIBF; riboflavin kinase, nucleotide-binding, transferase, ATP-BIND multifunctional enzyme; 1.95A {Corynebacterium ammoniagenes}
Probab=99.09 E-value=4.4e-10 Score=112.26 Aligned_cols=138 Identities=14% Similarity=0.096 Sum_probs=95.6
Q ss_pred CeEEEEcCeeccCCHHHHHHHHHHHhcCCE---EEEEEecChhhhhc-cCC--CCCCCCHHHHHHHHHhhcccCeeEEcC
Q 014503 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDF---LLVGIYTDQIVSEH-RGS--YHPIMHLHERSLSVLACRYVDEVIIGA 329 (423)
Q Consensus 256 ~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~---LiVgv~~D~~v~~~-Kg~--~~pi~~~~ER~~~v~~~~~Vd~Vvi~~ 329 (423)
..+|++-|+||.+|.||..+|++|++.++. ..|+++.|...... ++. ..++++++||+.++.++. ||.|++.+
T Consensus 15 ~~~vvtiG~FDGvH~GHq~Li~~a~~~a~~~~~~~vvvtFdphP~~v~~~~~~~~~L~~~~eR~~ll~~~g-VD~v~v~~ 93 (338)
T 2x0k_A 15 DNSAVTIGVFDGVHRGHQKLINATVEKAREVGAKAIMVTFDPHPVSVFLPRRAPLGITTLAERFALAESFG-IDGVLVID 93 (338)
T ss_dssp CCEEEEESCCTTCCHHHHHHHHHHHHHHHHHTCEEEEEEESSCHHHHHSTTCSCCBSSCHHHHHHHHHHTT-CSEEEEEC
T ss_pred CCeEEEEEeCCcccHHHHHHHHHHHHHHHHcCCcEEEEEecCCHHHHcCCccCCCCCCCHHHHHHHHHhcC-CCEEEEcc
Confidence 357899999999999999999999998865 47888888754332 111 257999999999999987 99988743
Q ss_pred C-----CCchHHHHhh-----cCccEEEecCCcCCCCCCCCCCChHH---HHHhCCeEEEeCC----CCCCCHHHHHHHH
Q 014503 330 P-----WEVTKDMITT-----FNICLVVHGTVSETNTPLTGQSDPYE---VAKSMGIFQLLES----PKSITTTSVAQRI 392 (423)
Q Consensus 330 p-----~~~~~~~i~~-----~~~d~vv~G~d~~~~~~~~~~~d~~~---~~k~~G~~~~i~~----~~~~Stt~Ii~RI 392 (423)
. ...+.++++. ++++.+|.|.|+....- ..-+... ..+.+..+..++. ...+|||.|.+.|
T Consensus 94 F~~~~a~ls~e~Fi~~il~~~l~~~~ivvG~Df~FG~~--r~g~~~~L~~~~~~g~~V~~v~~~~~~~~~ISST~IR~~L 171 (338)
T 2x0k_A 94 FTRELSGTSPEKYVEFLLEDTLHASHVVVGANFTFGEN--AAGTADSLRQICQSRLTVDVIDLLDDEGVRISSTTVREFL 171 (338)
T ss_dssp TTTSSSSCCHHHHHHHCCCCCTCEEEEEEETTCEESGG--GCEEHHHHHHHTTTTSEEEEECCCEETTEECSHHHHHHHH
T ss_pred ccHHHHhCCHHHHHHHHHHhhcCCCEEEEeecCCCCCC--CCCCHHHHHHHhcCCeEEEEECcEecCCcccccchHHHHH
Confidence 2 1234567665 68999999999854311 1112212 2223224556665 3469999998887
Q ss_pred Hhch
Q 014503 393 IANH 396 (423)
Q Consensus 393 ~~~~ 396 (423)
.+..
T Consensus 172 ~~G~ 175 (338)
T 2x0k_A 172 SEGD 175 (338)
T ss_dssp HTTC
T ss_pred hcCc
Confidence 6554
No 59
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.04 E-value=1e-09 Score=109.04 Aligned_cols=130 Identities=13% Similarity=0.134 Sum_probs=81.6
Q ss_pred CeEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhcCc-c-----cc-EEEecCC
Q 014503 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLK-W-----VD-EVIANAP 137 (423)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~-~-----VD-~vi~~~p 137 (423)
+++++++|+||++|.||+.++++|.+++|.++|+|.+++.. .+..+.++.++|++|++..- . .. +++....
T Consensus 7 ~~~~i~~GtFdP~h~GHl~~~~~a~~~~d~~~~~v~~~~~~--~~~~~~~~~~~R~~m~~~~~~~~~~~~~~~~~~~~~d 84 (352)
T 2qjt_B 7 YDISVFIGRFQPFHKGHLHNIIIALQNSKKVIINIGSCFNT--PNIKNPFSFEQRKQMIESDLQVAGIDLDTVVIEPLAD 84 (352)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHSEEEEEEEEEEESCC--CCSSSCSCHHHHHHHHHHHHHHTTCCGGGEEEEEEEC
T ss_pred ccEEEEEEecCCCChHHHHHHHHHHHhCCcEEEEECCCCCC--cccCCCCCHHHHHHHHHHHhccccCccceEEEEEcCC
Confidence 46899999999999999999999999999999999987632 22256789999999998521 1 11 2222111
Q ss_pred c----cccHHHHHHHHhh---cCccEEEEcCCCCCCCCCCcHHHHHHhCC--cEEEeccCCCCCHHHHHHHHHh
Q 014503 138 Y----AITEQFMNRLFNE---HKIDYIIHGDDPCLLPDGTDAYALAKKVG--RYKQIKRTEGVSSTDIVGRILS 202 (423)
Q Consensus 138 ~----~~~~efl~~ll~~---~~~d~VV~G~D~~~g~~g~~~~~~lk~~g--~~~~v~r~~~iSST~Ir~rI~~ 202 (423)
+ ....+++++.+.+ +.++++++|..- +...+ .+.... ....++....+|||.||+++..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~-----~~~~~-~~~~~~~~~~~~~~~~~~iSST~IR~~~~~ 152 (352)
T 2qjt_B 85 YFYQEQKWQDELRKNVYKHAKNNNSIAIVGHIK-----DSSSY-YIRSFPEWDYIGVDNYKNFNATEFRQKFYN 152 (352)
T ss_dssp CTTCHHHHHHHHHHHHTTTSCSSCCEEECCBSS-----SSHHH-HHHHCTTSEECCBCCTTCCCHHHHHHHHHT
T ss_pred CcCChHHHHHHHHHHHHHhcccCCeEEEEcCCC-----Ccchh-hhhcCCccceeccCCCCCCCchHHHHHHhc
Confidence 1 1112444433221 235677777541 11222 222221 2233334467999999999985
No 60
>1f9a_A Hypothetical protein MJ0541; alpha/beta, transferase, structural genomics; HET: ATP; 2.00A {Methanocaldococcus jannaschii} SCOP: c.26.1.3
Probab=99.02 E-value=5.8e-09 Score=93.74 Aligned_cols=124 Identities=21% Similarity=0.250 Sum_probs=77.7
Q ss_pred EEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHH-hhcccC-eeEE--cCCCC-
Q 014503 258 VVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVL-ACRYVD-EVII--GAPWE- 332 (423)
Q Consensus 258 iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~-~~~~Vd-~Vvi--~~p~~- 332 (423)
++++.|+||++|.||+.++++|++.+|.++|+|.+... ..|. .+.++.++|+.+++ +++..+ .+.+ .+.+.
T Consensus 2 i~i~~GsFdp~H~GH~~l~~~a~~~~d~v~v~v~~~~~--p~~~--~~~~~~~~R~~m~~~~~~~~~~~v~v~~~d~l~~ 77 (168)
T 1f9a_A 2 RGFIIGRFQPFHKGHLEVIKKIAEEVDEIIIGIGSAQK--SHTL--ENPFTAGERILMITQSLKDYDLTYYPIPIKDIEF 77 (168)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHTTTCSEEEEEECSTTC--CSSS--SCCSCHHHHHHHHHHHHTTSSCEEEEEECCCCSC
T ss_pred EEEEEEecCCcCHHHHHHHHHHHHhCCeEEEEEcCCCC--CCCC--CCCCCHHHHHHHHHHHHhcCCCceEEEeeCCccc
Confidence 68999999999999999999999999999999943322 2232 24569999998887 467666 4433 22221
Q ss_pred --chHHHHhhc--CccEEEecCCcCCCCCCCCCCChHHHHHhCCe-EEEeCCCC--CCCHHHHHHHHHhch
Q 014503 333 --VTKDMITTF--NICLVVHGTVSETNTPLTGQSDPYEVAKSMGI-FQLLESPK--SITTTSVAQRIIANH 396 (423)
Q Consensus 333 --~~~~~i~~~--~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~-~~~i~~~~--~~Stt~Ii~RI~~~~ 396 (423)
.-.++++.+ ..++++-|.++ ........++ +...+... .+|+|.|.+++....
T Consensus 78 ~~~w~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~i~~~~~~~~~~~~ISST~IR~~~~~g~ 137 (168)
T 1f9a_A 78 NSIWVSYVESLTPPFDIVYSGNPL-----------VRVLFEERGYEVKRPEMFNRKEYSGTEIRRRMLNGE 137 (168)
T ss_dssp GGGHHHHHHHHSCCCSEEECCCHH-----------HHHHHHHTTCEEECCCCCSTTTSSHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhccCCCEEEECcHH-----------HHHhhhhcCcEEEeCCccccCcccHHHHHHHHHcCC
Confidence 112333332 34556544321 0112223343 33333322 499999999997643
No 61
>3op1_A Macrolide-efflux protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PEG; 2.49A {Streptococcus pneumoniae}
Probab=99.01 E-value=2.1e-09 Score=105.87 Aligned_cols=136 Identities=18% Similarity=0.174 Sum_probs=94.7
Q ss_pred CeEEEEcCeeccCCHHHHHHHHHHHhcCCEE---EEEEecChhhhhcc-C----CCCCCCCHHHHHHHHHhhcccCeeEE
Q 014503 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFL---LVGIYTDQIVSEHR-G----SYHPIMHLHERSLSVLACRYVDEVII 327 (423)
Q Consensus 256 ~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~L---iVgv~~D~~v~~~K-g----~~~pi~~~~ER~~~v~~~~~Vd~Vvi 327 (423)
...|++-|.||-+|.||..+|++|++.++.+ .|.++-|......- + ..+++++++||+..+.++. ||.+++
T Consensus 20 ~~~vvtiG~FDGvH~GHq~li~~a~~~a~~~~~~~vV~TFdphP~~v~~~~~~~~~~~Lt~~~eK~~ll~~lG-VD~v~~ 98 (308)
T 3op1_A 20 SDSVVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNESPKIALEPYHPDLFLHILNPAERERKLKREG-VEELYL 98 (308)
T ss_dssp SCEEEEESCCSSCCHHHHHHHHHHHHHSSTTCCCEEEEEESSCTHHHHSCCCGGGGCBSSCHHHHHHHHHHHT-CCEEEE
T ss_pred CCeEEEEecCCcccHHHHHHHHHHHHHHHhcCCceEEEEecCCHHHHhCccccCCcccCCCHHHHHHHHHHcC-CCEEEE
Confidence 4679999999999999999999999988654 56677665332211 1 1257999999999999998 999987
Q ss_pred cCCC-----CchHHH----HhhcCccEEEecCCcCCCCCCCCCCChHHHHHhCC--eEEEeCC----CCCCCHHHHHHHH
Q 014503 328 GAPW-----EVTKDM----ITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMG--IFQLLES----PKSITTTSVAQRI 392 (423)
Q Consensus 328 ~~p~-----~~~~~~----i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G--~~~~i~~----~~~~Stt~Ii~RI 392 (423)
.+.. ..+.++ +++++++.+|.|.|+.-.. .....+ ..+..| .+..++. ...+|||.|.+-|
T Consensus 99 ~~F~~~~a~ls~e~Fv~~ll~~l~~~~ivvG~DfrFG~-r~G~~~---~L~~~~~~~V~~v~~~~~~~~~ISST~IR~~L 174 (308)
T 3op1_A 99 LDFSSQFASLTAQEFFATYIKAMNAKIIVAGFDYTFGS-DKKTAE---DLKNYFDGEVIIVPPVEDEKGKISSTRIRQAI 174 (308)
T ss_dssp ECCCHHHHTCCHHHHHHHHHHHHTEEEEEEETTCCBTT-TTBCST---THHHHCSSEEEEECCCBCSSCBCCHHHHHHHH
T ss_pred ecCCHHHHcCCHHHHHHHHHHHcCCCEEEECcCCCCCC-cCCCHH---HHHHhCCCCEEEeCCEecCCceEeHHHHHHHH
Confidence 4421 123444 4578999999999986543 122221 122223 4556654 3569999999888
Q ss_pred Hhch
Q 014503 393 IANH 396 (423)
Q Consensus 393 ~~~~ 396 (423)
.+..
T Consensus 175 ~~G~ 178 (308)
T 3op1_A 175 LDGN 178 (308)
T ss_dssp HHTC
T ss_pred HcCC
Confidence 6554
No 62
>1ej2_A Nicotinamide mononucleotide adenylyltransferase; dinucleotide binding fold, structural genomics, PSI; HET: NAD; 1.90A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.26.1.3 PDB: 1m8g_A* 1hyb_A* 1m8j_A* 1m8f_A* 1m8k_A*
Probab=98.98 E-value=3.1e-09 Score=96.63 Aligned_cols=125 Identities=18% Similarity=0.129 Sum_probs=81.6
Q ss_pred eEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHh-hccc----CeeEEc--C
Q 014503 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA-CRYV----DEVIIG--A 329 (423)
Q Consensus 257 ~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~-~~~V----d~Vvi~--~ 329 (423)
+++++.|+||++|.||+.++++|++.+|.++|++.++.. ..|. .++++.+||+.+++. +... |.+.+. +
T Consensus 4 ~~~i~~G~Fdp~H~GH~~l~~~a~~~~d~v~v~v~~~~~--p~~~--~~~~~~~~R~~~~~~a~~~~~~~~~~v~v~~~d 79 (181)
T 1ej2_A 4 MRGLLVGRMQPFHRGHLQVIKSILEEVDELIICIGSAQL--SHSI--RDPFTAGERVMMLTKALSENGIPASRYYIIPVQ 79 (181)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHTTTCSEEEEEECSTTC--CSSS--SSCSCHHHHHHHHHHHHHHTTCCGGGEEEEECC
T ss_pred eEEEEEEEcCCcCHHHHHHHHHHHHhCCeeEEEECCCCC--CcCC--CCCCCHHHHHHHHHHHHhhCCCCCCcEEEEecC
Confidence 579999999999999999999999999999999955432 2232 357799999988865 4544 455442 2
Q ss_pred CCCc---hHHHHhhc--CccEEEecCCcCCCCCCCCCCChHHHHHhCCe-EEEeCCCC--CCCHHHHHHHHHhch
Q 014503 330 PWEV---TKDMITTF--NICLVVHGTVSETNTPLTGQSDPYEVAKSMGI-FQLLESPK--SITTTSVAQRIIANH 396 (423)
Q Consensus 330 p~~~---~~~~i~~~--~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~-~~~i~~~~--~~Stt~Ii~RI~~~~ 396 (423)
.... ..++++.+ ..++++-|.++. ....+..|. +..++... .+|+|.|.+++....
T Consensus 80 ~~~~~~~w~~~~~~l~~~~~~~v~gr~~~-----------~~~~~~~~i~~~~~~~~~~~~ISST~IR~~l~~G~ 143 (181)
T 1ej2_A 80 DIECNALWVGHIKMLTPPFDRVYSGNPLV-----------QRLFSEDGYEVTAPPLFYRDRYSGTEVRRRMLDDG 143 (181)
T ss_dssp CCSCHHHHHHHHHHHSCCCSEEECCCHHH-----------HHHHHHTTCCEECCCCSSTTTSSHHHHHHHHHHTC
T ss_pred ccCCHHHHHHHHHHHCCCCCEEEECCHHH-----------HHHHHhCCeEEEecCCCccCcCcHHHHHHHHHcCC
Confidence 2211 22344443 567777775430 112233343 34444433 499999999987643
No 63
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=98.89 E-value=2.6e-09 Score=105.35 Aligned_cols=128 Identities=14% Similarity=0.213 Sum_probs=83.5
Q ss_pred CeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhh-ccc--Ce--eEEcCC
Q 014503 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLAC-RYV--DE--VIIGAP 330 (423)
Q Consensus 256 ~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~-~~V--d~--Vvi~~p 330 (423)
++++++.|+||++|.||+.++++|++.+|.++|+|.++..-. +. ...++.++|+.+++.. ... +. +++++.
T Consensus 7 ~~~~i~~G~FdP~H~GH~~li~~a~~~~d~v~v~v~~~~~p~--~~--~~~~~~~~R~~m~~~~~~~~~~~~~~~i~~~d 82 (341)
T 2qjo_A 7 YQYGIYIGRFQPFHLGHLRTLNLALEKAEQVIIILGSHRVAA--DT--RNPWRSPERMAMIEACLSPQILKRVHFLTVRD 82 (341)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHEEEEEEEEEEETCCC--CS--SSCSCHHHHHHHHHTTSCHHHHTTEEEEEEEC
T ss_pred eeEEEEEEEeCCCCHHHHHHHHHHHHhCCeEEEEECCcccCC--CC--CCCCCHHHHHHHHHHHhhhccCCeEEEEECCC
Confidence 578999999999999999999999999999999999885422 21 2347999999888754 433 22 333432
Q ss_pred CC-------c-hHHHHhhcC---ccEEEecCCcCCCCCCCCCCChHHHHHhC-C-eEEEeCCCCCCCHHHHHHHHHhch
Q 014503 331 WE-------V-TKDMITTFN---ICLVVHGTVSETNTPLTGQSDPYEVAKSM-G-IFQLLESPKSITTTSVAQRIIANH 396 (423)
Q Consensus 331 ~~-------~-~~~~i~~~~---~d~vv~G~d~~~~~~~~~~~d~~~~~k~~-G-~~~~i~~~~~~Stt~Ii~RI~~~~ 396 (423)
.- . ..++++.+. .++++-|.+..... + ..+.. | ....++....+|+|.|.+++....
T Consensus 83 ~~~~~~~w~~~~~~l~~~l~r~~~~~~~~g~~~~~~~--------~-~~~~~~~~~~~~~~~~~~iSST~IR~~l~~g~ 152 (341)
T 2qjo_A 83 WLYSDNLWLAAVQQQVLKITGGSNSVVVLGHRKDASS--------Y-YLNLFPQWDYLETGHYPDFSSTAIRGAYFEGK 152 (341)
T ss_dssp CTTCHHHHHHHHHHHHHHHHTTCSCEEEEECCCSGGG--------G-GGGSCTTSEEEECCCCTTCCHHHHHHHHHHTC
T ss_pred CcCChHHHHHHHHHHhHHhcCCCceEEEEcCCCCCCh--------H-HHHhccccceeecccCCCCCcHHHHHHHHcCC
Confidence 20 0 112333332 57777786542211 0 11112 2 345566567899999999987653
No 64
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=98.88 E-value=8.5e-09 Score=102.31 Aligned_cols=59 Identities=17% Similarity=0.186 Sum_probs=50.2
Q ss_pred CeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHh
Q 014503 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA 318 (423)
Q Consensus 256 ~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~ 318 (423)
++++++.|+|||+|.||+.++++|++.+|.|+|+|.++..- +.+ ++.++.+||+.+++.
T Consensus 7 ~~~~i~~GtFdP~h~GHl~~~~~a~~~~d~~~~~v~~~~~~---~~~-~~~~~~~~R~~m~~~ 65 (352)
T 2qjt_B 7 YDISVFIGRFQPFHKGHLHNIIIALQNSKKVIINIGSCFNT---PNI-KNPFSFEQRKQMIES 65 (352)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHSEEEEEEEEEEESCC---CCS-SSCSCHHHHHHHHHH
T ss_pred ccEEEEEEecCCCChHHHHHHHHHHHhCCcEEEEECCCCCC---ccc-CCCCCHHHHHHHHHH
Confidence 47899999999999999999999999999999999987532 222 456799999988865
No 65
>1v8f_A Pantoate-beta-alanine ligase; rossmann fold, dimer, structural genomics, riken STR genomics/proteomics initiative, RSGI; HET: P6G; 1.90A {Thermus thermophilus} SCOP: c.26.1.4 PDB: 1ufv_A
Probab=98.81 E-value=1.9e-10 Score=111.40 Aligned_cols=128 Identities=20% Similarity=0.194 Sum_probs=89.5
Q ss_pred CeEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCC---CCCCcHHHHHHHHhcCccccEEEecCCcc-c
Q 014503 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKG---PPVLSMEERLALVSGLKWVDEVIANAPYA-I 140 (423)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~---~pi~t~eER~~~l~~~~~VD~vi~~~p~~-~ 140 (423)
-..|.+.|+ +|.||+.||++|++.++.++|.+.+++.-...+. +.+.+.++|.++++++ +||.++. .+++ +
T Consensus 19 i~~VpTmG~---lH~GH~~Li~~A~~~a~~vVvsff~nP~qf~~~ed~~~yp~tle~d~~ll~~~-GvD~vf~-p~f~~m 93 (276)
T 1v8f_A 19 VGFVPTMGY---LHRGHLALVERARRENPFVVVSVFVNPLQFGPGEDYHRYPRDLERDRALLQEA-GVDLLFA-PGVEEM 93 (276)
T ss_dssp EEEEEECSS---CCHHHHHHHHHHHHHCSEEEEEECCCGGGCCTTSSTTTSCCCHHHHHHHHHHT-TCSEEEC-CCHHHH
T ss_pred ceEEEeCCC---ccHHHHHHHHHHHHhCCEEEEEEECCHHHhCCCcccCCCCcCHHHHHHHHHhC-CCCEEEe-CChHhC
Confidence 346889999 9999999999999999999999999886432221 4689999999999997 7999986 3331 1
Q ss_pred c-HHHHHHHHhhcCccEEEEcC----------------------C-CCCCCCCCcHHHHHHhCCc-------EE--Eecc
Q 014503 141 T-EQFMNRLFNEHKIDYIIHGD----------------------D-PCLLPDGTDAYALAKKVGR-------YK--QIKR 187 (423)
Q Consensus 141 ~-~efl~~ll~~~~~d~VV~G~----------------------D-~~~g~~g~~~~~~lk~~g~-------~~--~v~r 187 (423)
+ ++|...++...+++.+++|. | ++||.+..+....+++.++ ++ +.-+
T Consensus 94 ~p~~f~~~v~~~~~~~~vl~G~~RpghF~GV~TVv~kLf~iv~Pd~~~FG~kd~qq~~~l~~~~~dl~~~v~iv~~p~vr 173 (276)
T 1v8f_A 94 YPEGFATRVQVEGPLTALWEGAVRPGHFQGVATVVARLFLLVQPQRAYFGEKDYQQLLVVRRMVRDLGFPVEVVGVPTVR 173 (276)
T ss_dssp SCTTCCEEEEECSHHHHSTHHHHSTTHHHHHHHHHHHHHHHHCCSEEEEEGGGHHHHHHHHHHHHHHTCCCEEEEECCCB
T ss_pred CCcCCeEEEEecCCcceEEecCCCCCeecceeehhhHhhcccCCCEEEECCCCCcCHHHHHHHHHHcCCeEEEEecCcEE
Confidence 1 12322111013345556666 8 9999888888888877653 33 2223
Q ss_pred C-CC--CCHHHHH
Q 014503 188 T-EG--VSSTDIV 197 (423)
Q Consensus 188 ~-~~--iSST~Ir 197 (423)
. .| +|||.|+
T Consensus 174 ~~dGlaiSSrnir 186 (276)
T 1v8f_A 174 EEDGLALSSRNVY 186 (276)
T ss_dssp CTTSCBCCGGGGG
T ss_pred cCCCCEeEEeEEE
Confidence 3 33 8999886
No 66
>1kqn_A Nmnat, nicotinamide mononucleotide adenylyl transferase; nucleotidyltransferase superfamily; HET: NAD; 2.20A {Homo sapiens} SCOP: c.26.1.3 PDB: 1kqo_A* 1kr2_A* 1kku_A 1gzu_A*
Probab=98.73 E-value=2.9e-08 Score=96.54 Aligned_cols=72 Identities=14% Similarity=0.166 Sum_probs=53.3
Q ss_pred CCCeEEEEcCeeccCCHHHHHHHHHHHhcCC-----EEEEEEecChhhhhccCCCCCCCCHHHHHHHHH-hhcccCeeEE
Q 014503 254 PNARVVYIDGAFDLFHAGHVEILKKARQLGD-----FLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVL-ACRYVDEVII 327 (423)
Q Consensus 254 ~~~~iv~~~G~FDl~H~GHi~~L~~A~~~gd-----~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~-~~~~Vd~Vvi 327 (423)
+..+++++.|+||++|.||+.++++|++.++ .++|++..-...+..| .++++.++|+.+++ ++..++.+.+
T Consensus 6 ~~~~i~i~gGsFDPiH~GHl~l~~~a~~~~~~d~~~~vvv~~f~P~~~~~~K---~~l~s~~~R~~ml~~ai~~~~~~~v 82 (279)
T 1kqn_A 6 KTEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKK---KGLIPAYHRVIMAELATKNSKWVEV 82 (279)
T ss_dssp CEEEEEEEEECCTTCCHHHHHHHHHHHHHHHHTSSEEEEEEEEEECCGGGCC---TTCCCHHHHHHHHHHHTTTCSSEEE
T ss_pred CCceEEEEEeeecHhhHHHHHHHHHHHHHhcccCCceEEEEEEcCCCCCccc---cCCCCHHHHHHHHHHHhcCCCcEEE
Confidence 3467899999999999999999999998764 3666553222222233 36889999998886 4678888877
Q ss_pred c
Q 014503 328 G 328 (423)
Q Consensus 328 ~ 328 (423)
.
T Consensus 83 ~ 83 (279)
T 1kqn_A 83 D 83 (279)
T ss_dssp C
T ss_pred e
Confidence 5
No 67
>3ag6_A Pantothenate synthetase; ATP-dependent enzyme, ATP-binding, nucleotide-binding, pantothenate biosynthesis; HET: PAJ PG4; 1.85A {Staphylococcus aureus} PDB: 3ag5_A* 2x3f_A*
Probab=98.67 E-value=1.7e-09 Score=105.07 Aligned_cols=109 Identities=17% Similarity=0.219 Sum_probs=81.5
Q ss_pred EEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCC---CCCCcHHHHHHHHhcCccccEEEecCCcc-cc-H
Q 014503 68 VYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKG---PPVLSMEERLALVSGLKWVDEVIANAPYA-IT-E 142 (423)
Q Consensus 68 V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~---~pi~t~eER~~~l~~~~~VD~vi~~~p~~-~~-~ 142 (423)
|.+.|+ +|.||+.+|++|++.++.++|.+..+|.-...+. +.+.+.+++.++++.+ +||.++. .++. ++ +
T Consensus 28 VpTmG~---lH~GH~~LI~~a~~~a~~vVvsffvnP~qf~~~ed~~~yprtle~d~~ll~~~-GvD~vf~-p~~~~myp~ 102 (283)
T 3ag6_A 28 IPTMGA---LHDGHLTMVRESVSTNDITIVSVFVNPLQFGPNEDFDAYPRQIDKDLELVSEV-GADIVFH-PAVEDMYPG 102 (283)
T ss_dssp EEECSS---CCHHHHHHHHHHHTTSSEEEEEECCCGGGCCTTSSTTTSCCCHHHHHHHHHHH-TCSEEEC-CCHHHHSCS
T ss_pred EECCcc---ccHHHHHHHHHHHHhCCEEEEEEeCChhhcCCccccccCCCCHHHHHHHHHhC-CCCEEEe-CCHHHCCCC
Confidence 458997 9999999999999999999999988885322221 4588999999999997 8999997 3321 11 1
Q ss_pred HH--------HHH-HHhhcCcc-------------EEEEcCCCCCCCCCCcHHHHHHhCCc
Q 014503 143 QF--------MNR-LFNEHKID-------------YIIHGDDPCLLPDGTDAYALAKKVGR 181 (423)
Q Consensus 143 ef--------l~~-ll~~~~~d-------------~VV~G~D~~~g~~g~~~~~~lk~~g~ 181 (423)
+| +.+ +...++|. .+|.|+|++||.+..+....+++.++
T Consensus 103 ~f~~~v~~~~l~~~L~G~~rp~hF~GV~TVV~KLf~iV~p~~~~FG~Kd~qql~~l~~m~~ 163 (283)
T 3ag6_A 103 ELGIDVKVGPLADVLEGAKRPGHFDGVVTVVNKLFNIVMPDYAYFGKKDAQQLAIVEQMVK 163 (283)
T ss_dssp SCSEEEEECGGGSSTHHHHSTTHHHHHHHHHHHHHHHHCCSEEEEEGGGHHHHHHHHHHHH
T ss_pred CceEEEeccccchhhccCCCCCeecchhhHhhhhcEEecCceEEECCCCccCHHHHHHHHH
Confidence 23 211 22237888 89999999999988888778876553
No 68
>1nup_A FKSG76; NAD biosynthesis, mitochondria, pyridine adenylyltransferase catalysis, transferase; HET: NMN; 1.90A {Homo sapiens} SCOP: c.26.1.3 PDB: 1nuq_A* 1nur_A 1nus_A* 1nut_A* 1nuu_A*
Probab=98.61 E-value=1.1e-07 Score=90.90 Aligned_cols=71 Identities=14% Similarity=0.119 Sum_probs=51.8
Q ss_pred CeEEEEcCeeccCCHHHHHHHHHHHhcCCE----EEEEEecChhhhhccCCCCCCCCHHHHHHHHH-hhcccCeeEEc
Q 014503 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDF----LLVGIYTDQIVSEHRGSYHPIMHLHERSLSVL-ACRYVDEVIIG 328 (423)
Q Consensus 256 ~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~----LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~-~~~~Vd~Vvi~ 328 (423)
++++++.|+|||+|.||+.++++|++.++. .+||+.-.......+. .++++.++|+.+++ +++..+.+.+.
T Consensus 6 ~~i~i~~GsFdPiH~GHl~l~~~a~~~~~~~~~~~vv~~~~~p~~~~~~k--~~~~~~~~R~~m~~~ai~~~~~~~v~ 81 (252)
T 1nup_A 6 PVVLLACGSFNPITNMHLRMFEVARDHLHQTGMYQVIQGIISPVNDTYGK--KDLAASHHRVAMARLALQTSDWIRVD 81 (252)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHHHHTTSEEEEEEEEEECCTTCSS--SCCCCHHHHHHHHHHHGGGCSSEEEC
T ss_pred ceEEEEEecCcHhhHHHHHHHHHHHHHhcccCCceEEEEEEeCCCCcccC--CCCCCHHHHHHHHHHHhcCCCceEee
Confidence 578999999999999999999999988743 6665442222112221 36889999998875 57777777664
No 69
>2ejc_A Pantoate--beta-alanine ligase; X-RAY diffraction, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Thermotoga maritima}
Probab=98.58 E-value=7.4e-08 Score=93.53 Aligned_cols=72 Identities=17% Similarity=0.287 Sum_probs=57.6
Q ss_pred CCeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEE--ecChhhhhccCCCCCCCCHHHHHHHHHhhcccCeeEEcC
Q 014503 255 NARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGI--YTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGA 329 (423)
Q Consensus 255 ~~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv--~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~~~Vd~Vvi~~ 329 (423)
+++++++ |+||-+|.||+.+|++|++.+|.+||++ |.++.........+| .++++|+..+.++. ||.|++.+
T Consensus 21 g~~V~~v-gtfdgLH~GH~sLI~~A~~~ad~vVVSffvnP~qf~~~ed~~~yp-~tle~d~~lL~~~G-VD~vf~p~ 94 (280)
T 2ejc_A 21 KKTIGFV-PTMGYLHEGHLSLVRRARAENDVVVVSIFVNPTQFGPNEDYERYP-RDFERDRKLLEKEN-VDCIFHPS 94 (280)
T ss_dssp TCCEEEE-EECSCCCHHHHHHHHHHHHHSSEEEEEECCCGGGCCTTSCGGGSC-CCHHHHHHHHHTTT-CSEEECCC
T ss_pred CCEEEEE-cCCccccHHHHHHHHHHHHhCCEEEEEEeCChHHhcCCcccccCC-CCHHHHHHHHHHCC-CCEEEeCC
Confidence 5678888 8999999999999999999999999999 555443322112244 58999999999998 99999854
No 70
>3cov_A Pantothenate synthetase; pantothenate biosynthesis, enzym ligase, drug design, ATP-binding, magnesium, metal-binding; 1.50A {Mycobacterium tuberculosis} SCOP: c.26.1.4 PDB: 3cow_A* 3coy_A* 3coz_A* 3imc_A* 3ime_A* 3img_A* 3iob_A* 3ioc_A* 3iod_A* 3ioe_A* 3iub_A* 3iue_A* 3ivc_A* 3ivg_A* 3ivx_A* 2a84_A* 1n2b_A* 1n2e_A* 1n2g_A* 1n2h_A* ...
Probab=98.47 E-value=1.1e-08 Score=100.14 Aligned_cols=112 Identities=16% Similarity=0.186 Sum_probs=78.5
Q ss_pred EEEEecccCcCcHHHHHHHHHHHH-hcCeeEEEEecchhhhccCC---CCCCcHHHHHHHHhcCccccEEEecCCcc-cc
Q 014503 67 RVYMDGCFDLMHYGHANALRQAKA-LGDELVVGVVSDEEIIANKG---PPVLSMEERLALVSGLKWVDEVIANAPYA-IT 141 (423)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~-~~d~LiVgV~sd~~i~~~K~---~pi~t~eER~~~l~~~~~VD~vi~~~p~~-~~ 141 (423)
+|.+..++..+|.||+.||++|++ .++.++|.+..+|.-...+. ..+.+.++++++++.+ +||.++. .+++ +.
T Consensus 34 ~vg~VpTmG~LH~GH~sLI~~A~~~~a~~vVvSffvnP~qF~~~ed~~~yprtle~d~~lL~~~-GVD~vf~-p~~~~my 111 (301)
T 3cov_A 34 RVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQFGAGGDLDAYPRTPDDDLAQLRAE-GVEIAFT-PTTAAMY 111 (301)
T ss_dssp EEEEEEECSCCCHHHHHHHHHHHTSTTEEEEEEECCCGGGCCSSSHHHHSCCCHHHHHHHHHHT-TCCEEEC-CCHHHHC
T ss_pred cEEEEecCCcccHHHHHHHHHHHHhcCCEEEEEEcCChhhcCCccccccCCCCHHHHHHHHHhC-CCCEEEe-CCHHHCC
Confidence 455556666699999999999999 99989999988885332222 4588999999999997 8999997 3321 11
Q ss_pred -HHHHHHHHhhcCccEEEEcC-----------------------CCCCCCCCCcHHHHHHhCCc
Q 014503 142 -EQFMNRLFNEHKIDYIIHGD-----------------------DPCLLPDGTDAYALAKKVGR 181 (423)
Q Consensus 142 -~efl~~ll~~~~~d~VV~G~-----------------------D~~~g~~g~~~~~~lk~~g~ 181 (423)
++|...+.-. ++..+++|. |+.||.+..+....+++.++
T Consensus 112 P~~f~~~v~~~-~~~~vl~G~~RPghF~GV~TVV~KLfniv~P~~a~FG~Kd~qql~~lr~mv~ 174 (301)
T 3cov_A 112 PDGLRTTVQPG-PLAAELEGGPRPTHFAGVLTVVLKLLQIVRPDRVFFGEKDYQQLVLIRQLVA 174 (301)
T ss_dssp TTCSCSEEECC-GGGGSGGGSSCTTHHHHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHH
T ss_pred CCCceEEEecC-CcceeeecCCCCChhhhhhHHHHHHhhccCCCeEEECCCcccCHHHHHHHHH
Confidence 1232211111 345566777 89999888887778876553
No 71
>1jhd_A Sulfate adenylyltransferase; sulfurylase, APS, chemoautotroph, bromide; 1.70A {Sulfur-oxidizing endosymbiont ofriftia pachyptila} SCOP: b.122.1.3 c.26.1.5
Probab=98.32 E-value=6.2e-06 Score=83.82 Aligned_cols=133 Identities=17% Similarity=0.098 Sum_probs=85.9
Q ss_pred eEEEEecccCcCcHHHHHHHHHHHHhc--CeeEEEEecchhhhccCCCCCCcHHHHHHHHhcCc-cc---cEE-EecCCc
Q 014503 66 VRVYMDGCFDLMHYGHANALRQAKALG--DELVVGVVSDEEIIANKGPPVLSMEERLALVSGLK-WV---DEV-IANAPY 138 (423)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~~~--d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~-~V---D~v-i~~~p~ 138 (423)
++|++.|+||++|.||..++++|.+.. |.|++-+.-. +.| +--.+.+.|+++++.+- .. +.+ +...|+
T Consensus 193 ~~VvafqTrNPiHrgH~~l~~~Ale~~~~D~vll~P~~g----~~K-~~di~~~~R~~~~~~~~~~~~p~~~v~l~~~p~ 267 (396)
T 1jhd_A 193 SKVVAFQTRNPMHRAHEELCRMAMESLDADGVVVHMLLG----KLK-KGDIPAPVRDAAIRTMAEVYFPPNTVMVTGYGF 267 (396)
T ss_dssp SSEEEEEESSCCCHHHHHHHHHHHHHHTCSEEEEEEEEC----CCC-TTCCCHHHHHHHHHHHHHHHSCTTCEEEEEEEC
T ss_pred ceEEEeccCCCCchHHHHHHHHHHHHcCCCeEEEEECCC----CCC-CCCCCHHHHHHHHHHHHHhcCCCcceEEEechH
Confidence 468889999999999999999999987 7666555432 223 44678999999988631 11 111 111223
Q ss_pred cc-----cHHHHHHHH-hhcCccEEEEcCCCC---CCCCCCcHHHHHHhC-------CcEEEecc---------------
Q 014503 139 AI-----TEQFMNRLF-NEHKIDYIIHGDDPC---LLPDGTDAYALAKKV-------GRYKQIKR--------------- 187 (423)
Q Consensus 139 ~~-----~~efl~~ll-~~~~~d~VV~G~D~~---~g~~g~~~~~~lk~~-------g~~~~v~r--------------- 187 (423)
.+ ++..+..++ +.++|.++++|.|.. ..+++.+..+.++.. .+++.+++
T Consensus 268 ~m~~aGPreailhaiirkn~G~t~fIVGrDhag~~~~y~~~~aq~il~~~~~~~~l~i~iv~~~~~~Y~~~~~~~~~~~~ 347 (396)
T 1jhd_A 268 DMLYAGPREAVLHAYFRQNMGATHFIIGRDHAGVGDYYGAFDAQTIFDDEVPEGAMEIEIFRADHTAYSKKLNKIVMMRD 347 (396)
T ss_dssp CCCCCTHHHHHHHHHHHHHTTCSEEEECTTTTCCTTCSCTTHHHHHHHHTSCTTSCSCEEEECCCEEEETTTTEEEEGGG
T ss_pred HhhcCCchHHHHHHHHHHcCCCcEEEECCCCCCccccCCcchHHHHHHhcccccccceeEEecccceecCCCCeEEEccc
Confidence 22 133344444 468999999999963 335566555566642 23333322
Q ss_pred --------CCCCCHHHHHHHHHhc
Q 014503 188 --------TEGVSSTDIVGRILSS 203 (423)
Q Consensus 188 --------~~~iSST~Ir~rI~~~ 203 (423)
...||||+||+++.++
T Consensus 348 ~p~~~~~~~~~ISgT~IR~~L~~G 371 (396)
T 1jhd_A 348 VPDHTKEDFVLLSGTKVREMLGQG 371 (396)
T ss_dssp CTTCCGGGEECCCHHHHHHHHHTT
T ss_pred cCcccCCCccccCHHHHHHHHHCC
Confidence 0149999999999876
No 72
>1v47_A ATP sulfurylase; product binding complex, zinc, riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; HET: ADX; 2.49A {Thermus thermophilus} SCOP: b.122.1.3 c.26.1.5
Probab=98.26 E-value=5e-06 Score=83.19 Aligned_cols=134 Identities=16% Similarity=0.140 Sum_probs=86.0
Q ss_pred eEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhcCc-cc---cEEE-ecCCccc
Q 014503 66 VRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLK-WV---DEVI-ANAPYAI 140 (423)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~-~V---D~vi-~~~p~~~ 140 (423)
++|++.|+||++|.||..+.++|.+.+|.|++-+.-- +.| +-..+.+.|+++++.+- .. +.++ ...|+.+
T Consensus 156 ~~VvafqTrNPiHrgH~~l~~~ale~~d~vll~P~~g----~~K-~~d~~~~~R~~~~~~~i~~~~p~~~~~l~~~p~~m 230 (349)
T 1v47_A 156 RKVVAFQTRNAPHRAHEYLIRLGLELADGVLVHPILG----AKK-PDDFPTEVIVEAYQALIRDFLPQERVAFFGLATPM 230 (349)
T ss_dssp CSEEEEEESSCCCHHHHHHHHHHHHHSSEEEEEEBCS----CCC-TTSCCHHHHHHHHHHHHHHHSCGGGEEECCBCSCC
T ss_pred CeEEEeecCCCCchHHHHHHHHHHHhCCcEEEEECCC----CCC-CCCCCHHHHHHHHHHHHhhcCCCcceEEEechHHh
Confidence 4678899999999999999999999999777655532 223 45689999999998631 11 1122 2233333
Q ss_pred c-----HHHHHHHH-hhcCccEEEEcCCCC---CCCCCCcHHHHHHhCC----cEEEecc--------------------
Q 014503 141 T-----EQFMNRLF-NEHKIDYIIHGDDPC---LLPDGTDAYALAKKVG----RYKQIKR-------------------- 187 (423)
Q Consensus 141 ~-----~efl~~ll-~~~~~d~VV~G~D~~---~g~~g~~~~~~lk~~g----~~~~v~r-------------------- 187 (423)
. +..+..++ +.++|.++++|.|.. ..+++.+..+.++... ++..+++
T Consensus 231 ~~aGPreailhaiirkn~G~t~fIVGrDhag~~~~y~~~~aq~i~~~~~~l~i~~v~~~~~~Y~~~~~~~~~~~~~p~~~ 310 (349)
T 1v47_A 231 RYAGPKEAVFHALVRKNFGATHFLVGRDHAGVGDFYDPYAAHRIFDRLPPLGIEIVKVGAVFHCPLCGGIASERTCPEGH 310 (349)
T ss_dssp CCCTHHHHHHHHHHHHHTTCSEEEECTTTTCSTTCSCTTHHHHGGGGSCCCSSEEEECCCEEEETTTTEEEETTTSCGGG
T ss_pred hcCCcHHHHHHHHHHHcCCCcEEEECcCCCCcccccCcccHHHHHHhhhhcCceEEeccccEEcccCCceEEccccCccC
Confidence 1 34455544 468999999999963 2234444444444431 2222111
Q ss_pred ---CCCCCHHHHHHHHHhcc
Q 014503 188 ---TEGVSSTDIVGRILSSM 204 (423)
Q Consensus 188 ---~~~iSST~Ir~rI~~~~ 204 (423)
.-.||||+||+++.++.
T Consensus 311 ~~~~~~ISgT~iR~~L~~G~ 330 (349)
T 1v47_A 311 REKRTAISMTKVRALLREGK 330 (349)
T ss_dssp GGGCEECCHHHHHHHHHTTC
T ss_pred CCcccccCHHHHHHHHHCcC
Confidence 01389999999998763
No 73
>3gmi_A UPF0348 protein MJ0951; protein with unknown function, structural genomics, PSI, MCS protein structure initiative; 1.91A {Methanocaldococcus jannaschii}
Probab=98.25 E-value=3.8e-06 Score=84.22 Aligned_cols=90 Identities=16% Similarity=0.277 Sum_probs=69.2
Q ss_pred CCeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChh--hhhccCCCCCCCCHHHHHHHHHhhcccCeeEEcCCC-
Q 014503 255 NARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQI--VSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPW- 331 (423)
Q Consensus 255 ~~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~--v~~~Kg~~~pi~~~~ER~~~v~~~~~Vd~Vvi~~p~- 331 (423)
++++|.+-|.||+||.||..+|++|++ .+ ++++|.+-.. +. +|. ..+++..+|+.+++.+ .||.|+.-+..
T Consensus 51 ~~~~v~~lG~FDg~H~GHq~lI~~a~~-~~-~~~~Vms~~~~~vq--rg~-~~l~~~~~R~~~~~~~-GvD~vielpF~~ 124 (357)
T 3gmi_A 51 KDKIVCDFTEYNPLHKGHKYALEKGKE-HG-IFISVLPGPLERSG--RGI-PYFLNRYIRAEMAIRA-GADIVVEGPPMG 124 (357)
T ss_dssp CCCEEEEECCCTTCCHHHHHHHHHHHT-SS-EEEEEECCTTSBCT--TSS-BCSSCHHHHHHHHHHH-TCSEEEECCCGG
T ss_pred CCCEEEEEEecCccCHHHHHHHHHHHH-cC-CeEEEEcCchHHhc--CCC-CcCCCHHHHHHHHHHC-CCCEEEEcCchh
Confidence 457899999999999999999999999 55 6666665433 43 343 5789999999999998 79998885431
Q ss_pred -CchHHHH-------hhcCccEEEecC
Q 014503 332 -EVTKDMI-------TTFNICLVVHGT 350 (423)
Q Consensus 332 -~~~~~~i-------~~~~~d~vv~G~ 350 (423)
..+.+++ .+++++.+|.|.
T Consensus 125 ~~s~~~Fv~~~v~ll~~l~~~~iv~G~ 151 (357)
T 3gmi_A 125 IMGSGQYMRCLIKMFYSLGAEIIPRGY 151 (357)
T ss_dssp GSCHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred hCCHHHHHHHHHHHHHHcCCCEEEECC
Confidence 2334454 458999999997
No 74
>3uk2_A Pantothenate synthetase; AMP, structural genomics, seattle S genomics center for infectious disease, ssgcid, ligase; HET: AMP; 2.25A {Burkholderia thailandensis} SCOP: c.26.1.0
Probab=97.51 E-value=0.00014 Score=70.37 Aligned_cols=68 Identities=19% Similarity=0.225 Sum_probs=56.8
Q ss_pred eEEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhhc-cCC--CCCCcHHHHHHHHhcCccccEEEe
Q 014503 66 VRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIA-NKG--PPVLSMEERLALVSGLKWVDEVIA 134 (423)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~-~K~--~pi~t~eER~~~l~~~~~VD~vi~ 134 (423)
++|-+..+..++|.||+.|+++|++.++.++|.+..++.-.. ... +.+.+.++++++++.. +||.|+.
T Consensus 22 ~~ig~VPTMG~LH~GH~sLi~~A~~~~d~vVvSifvnP~qf~~~ed~~~yprt~e~d~~ll~~~-GvD~vF~ 92 (283)
T 3uk2_A 22 NRTAFVPTMGNLHEGHLSLMRLARQHGDPVVASIFVNRLQFGPNEDFDKYPRTLQEDIEKLQKE-NVYVLFA 92 (283)
T ss_dssp SSCEEEEECSSCCHHHHHHHHHHHTTCSSEEEEECCCGGGSCTTSCTTTSCCCHHHHHHHHHTT-TCSEEEC
T ss_pred CeEEEECCCCcccHHHHHHHHHHHHhCCEEEEEEcCCHHHcCCcccccccCCCHHHHHHHHHHc-CCCEEEe
Confidence 357888999999999999999999999999999888875322 222 5688999999999997 8998875
No 75
>1v8f_A Pantoate-beta-alanine ligase; rossmann fold, dimer, structural genomics, riken STR genomics/proteomics initiative, RSGI; HET: P6G; 1.90A {Thermus thermophilus} SCOP: c.26.1.4 PDB: 1ufv_A
Probab=96.87 E-value=0.0028 Score=61.22 Aligned_cols=68 Identities=18% Similarity=0.260 Sum_probs=52.9
Q ss_pred EEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccC-CCCCCCCHHHHHHHHHhhcccCeeEEcC
Q 014503 258 VVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRG-SYHPIMHLHERSLSVLACRYVDEVIIGA 329 (423)
Q Consensus 258 iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg-~~~pi~~~~ER~~~v~~~~~Vd~Vvi~~ 329 (423)
.|.+-|. +|.||..++++|++.+|.++|.+..+..-.-... ..+...++++|...+.++. ||.|+..+
T Consensus 21 ~VpTmG~---lH~GH~~Li~~A~~~a~~vVvsff~nP~qf~~~ed~~~yp~tle~d~~ll~~~G-vD~vf~p~ 89 (276)
T 1v8f_A 21 FVPTMGY---LHRGHLALVERARRENPFVVVSVFVNPLQFGPGEDYHRYPRDLERDRALLQEAG-VDLLFAPG 89 (276)
T ss_dssp EEEECSS---CCHHHHHHHHHHHHHCSEEEEEECCCGGGCCTTSSTTTSCCCHHHHHHHHHHTT-CSEEECCC
T ss_pred EEEeCCC---ccHHHHHHHHHHHHhCCEEEEEEECCHHHhCCCcccCCCCcCHHHHHHHHHhCC-CCEEEeCC
Confidence 3557777 9999999999999999999999998864321111 1135789999999999986 99988743
No 76
>3inn_A Pantothenate synthetase; ssgcid, SBRI, UW, decode, NIH, niaid, pantoate beta alanine ligase, ATP-binding, cytoplasm, ligase; HET: ATP; 2.10A {Brucella melitensis}
Probab=96.63 E-value=0.0052 Score=60.09 Aligned_cols=66 Identities=23% Similarity=0.292 Sum_probs=51.9
Q ss_pred CeEEE--EecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhh-ccCC--CCCCcHHHHHHHHhcCccccEEEe
Q 014503 65 RVRVY--MDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEII-ANKG--PPVLSMEERLALVSGLKWVDEVIA 134 (423)
Q Consensus 65 ~~~V~--~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~-~~K~--~pi~t~eER~~~l~~~~~VD~vi~ 134 (423)
.++++ +.| .+|.||+.|+++|++.+|.++|.+..+|.=. +... ...-+.++.+++++.. +||.|+.
T Consensus 43 ~~IgfVPTMG---~LH~GHlsLi~~A~~~~d~vVVSIFVNP~QF~~~EDl~~YPRtle~D~~ll~~~-GvD~vF~ 113 (314)
T 3inn_A 43 KKIGFVPTMG---YLHKGHLELVRRARVENDVTLVSIFVNPLQFGANEDLGRYPRDLERDAGLLHDA-QVDYLFA 113 (314)
T ss_dssp CCEEEEEECS---SCCHHHHHHHHHHHHHCSEEEEEECCCGGGSCTTSSTTTCCCCHHHHHHHHHHT-TCSEEEC
T ss_pred CeEEEEcCCC---ccCHHHHHHHHHHHHhCCEEEEEECCChhhcCCCccccccCCCHHHHHHHHHhC-CCCEEEC
Confidence 34555 667 5999999999999999999999998887522 2222 4567889999999987 8998875
No 77
>3ag6_A Pantothenate synthetase; ATP-dependent enzyme, ATP-binding, nucleotide-binding, pantothenate biosynthesis; HET: PAJ PG4; 1.85A {Staphylococcus aureus} PDB: 3ag5_A* 2x3f_A*
Probab=96.45 E-value=0.011 Score=57.33 Aligned_cols=71 Identities=15% Similarity=0.222 Sum_probs=52.8
Q ss_pred CCeEEE--EcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccC-CCCCCCCHHHHHHHHHhhcccCeeEEcC
Q 014503 255 NARVVY--IDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRG-SYHPIMHLHERSLSVLACRYVDEVIIGA 329 (423)
Q Consensus 255 ~~~iv~--~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg-~~~pi~~~~ER~~~v~~~~~Vd~Vvi~~ 329 (423)
+++|++ +-|. +|.||..++++|++.+|.++|.+..+..-.-... ......+++++...+.++. ||.|+..+
T Consensus 22 g~~I~fVpTmG~---lH~GH~~LI~~a~~~a~~vVvsffvnP~qf~~~ed~~~yprtle~d~~ll~~~G-vD~vf~p~ 95 (283)
T 3ag6_A 22 GTTIGFIPTMGA---LHDGHLTMVRESVSTNDITIVSVFVNPLQFGPNEDFDAYPRQIDKDLELVSEVG-ADIVFHPA 95 (283)
T ss_dssp TCCEEEEEECSS---CCHHHHHHHHHHHTTSSEEEEEECCCGGGCCTTSSTTTSCCCHHHHHHHHHHHT-CSEEECCC
T ss_pred CCcEEEEECCcc---ccHHHHHHHHHHHHhCCEEEEEEeCChhhcCCccccccCCCCHHHHHHHHHhCC-CCEEEeCC
Confidence 456766 7775 9999999999999999999999987653211111 0123678999999988885 99888743
No 78
>3q12_A Pantoate--beta-alanine ligase; structural genomics, center for structural genomics of infec diseases, csgid; HET: PAF; 1.58A {Yersinia pestis} SCOP: c.26.1.4 PDB: 3q10_A* 3mue_A 1iho_A 3guz_A*
Probab=96.17 E-value=0.0055 Score=59.26 Aligned_cols=65 Identities=22% Similarity=0.362 Sum_probs=45.2
Q ss_pred CCCeEEE--EcCeeccCCHHHHHHHHHHHhcCCEEEEEEecCh-------hhhhccCCCCCCCCHHHHHHHHHhhcccCe
Q 014503 254 PNARVVY--IDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQ-------IVSEHRGSYHPIMHLHERSLSVLACRYVDE 324 (423)
Q Consensus 254 ~~~~iv~--~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~-------~v~~~Kg~~~pi~~~~ER~~~v~~~~~Vd~ 324 (423)
.+++|++ +-|+ +|.||++++++|++.||.+||+|.-+. +..+ +|= ++++=...+.+. .||.
T Consensus 23 ~g~~IgfVPTMG~---LH~GHlsLv~~Ar~~~d~vVVSIFVNP~QF~~~EDl~~-----YPR-tle~D~~~l~~~-gvd~ 92 (287)
T 3q12_A 23 EGKRIALVPTMGN---LHEGHMTLVDEAKTRADVVVVTIFVNPLQFERPDDLAH-----YPR-TLQEDCEKLTRH-GADL 92 (287)
T ss_dssp TTCCEEEEEECSS---CCHHHHHHHHHHHTTSSEEEEEECCCGGGCSSHHHHHH-----SCC-CHHHHHHHHHHH-TCSE
T ss_pred cCCeEEEEcCCCc---ccHHHHHHHHHHHHhCCEEEEEeccCcccCCCcchhhc-----CCC-CHHHHHHHHHHC-CCCE
Confidence 3578888 7786 999999999999999999999998553 2222 232 344434444444 5886
Q ss_pred eEEc
Q 014503 325 VIIG 328 (423)
Q Consensus 325 Vvi~ 328 (423)
|+..
T Consensus 93 vF~P 96 (287)
T 3q12_A 93 VFAP 96 (287)
T ss_dssp EECC
T ss_pred EECC
Confidence 6653
No 79
>3cov_A Pantothenate synthetase; pantothenate biosynthesis, enzym ligase, drug design, ATP-binding, magnesium, metal-binding; 1.50A {Mycobacterium tuberculosis} SCOP: c.26.1.4 PDB: 3cow_A* 3coy_A* 3coz_A* 3imc_A* 3ime_A* 3img_A* 3iob_A* 3ioc_A* 3iod_A* 3ioe_A* 3iub_A* 3iue_A* 3ivc_A* 3ivg_A* 3ivx_A* 2a84_A* 1n2b_A* 1n2e_A* 1n2g_A* 1n2h_A* ...
Probab=95.86 E-value=0.02 Score=55.81 Aligned_cols=72 Identities=17% Similarity=0.283 Sum_probs=50.0
Q ss_pred CeEEEEcCeeccCCHHHHHHHHHHHh-cCCEEEEEEecChhhhhccCC-CCCCCCHHHHHHHHHhhcccCeeEEcC
Q 014503 256 ARVVYIDGAFDLFHAGHVEILKKARQ-LGDFLLVGIYTDQIVSEHRGS-YHPIMHLHERSLSVLACRYVDEVIIGA 329 (423)
Q Consensus 256 ~~iv~~~G~FDl~H~GHi~~L~~A~~-~gd~LiVgv~~D~~v~~~Kg~-~~pi~~~~ER~~~v~~~~~Vd~Vvi~~ 329 (423)
.+++++ .++.-+|.||..++++|++ .+|.+||.+..+..-.-.... .....+++++...+.++. ||.|+..+
T Consensus 33 ~~vg~V-pTmG~LH~GH~sLI~~A~~~~a~~vVvSffvnP~qF~~~ed~~~yprtle~d~~lL~~~G-VD~vf~p~ 106 (301)
T 3cov_A 33 RRVMLV-PTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQFGAGGDLDAYPRTPDDDLAQLRAEG-VEIAFTPT 106 (301)
T ss_dssp CEEEEE-EECSCCCHHHHHHHHHHHTSTTEEEEEEECCCGGGCCSSSHHHHSCCCHHHHHHHHHHTT-CCEEECCC
T ss_pred CcEEEE-ecCCcccHHHHHHHHHHHHhcCCEEEEEEcCChhhcCCccccccCCCCHHHHHHHHHhCC-CCEEEeCC
Confidence 444432 3334499999999999999 999999999876532111000 023568999999988886 99888743
No 80
>3q12_A Pantoate--beta-alanine ligase; structural genomics, center for structural genomics of infec diseases, csgid; HET: PAF; 1.58A {Yersinia pestis} SCOP: c.26.1.4 PDB: 3q10_A* 3mue_A 1iho_A 3guz_A*
Probab=95.83 E-value=0.0098 Score=57.51 Aligned_cols=66 Identities=20% Similarity=0.188 Sum_probs=47.9
Q ss_pred CeEEE--EecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhh-ccCC--CCCCcHHHHHHHHhcCccccEEEe
Q 014503 65 RVRVY--MDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEII-ANKG--PPVLSMEERLALVSGLKWVDEVIA 134 (423)
Q Consensus 65 ~~~V~--~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~-~~K~--~pi~t~eER~~~l~~~~~VD~vi~ 134 (423)
.++++ +.|+ +|-||+.|+++|++.+|.++|.+.-+|.=. +... ...=+.++=+++++.. +||.|+.
T Consensus 25 ~~IgfVPTMG~---LH~GHlsLv~~Ar~~~d~vVVSIFVNP~QF~~~EDl~~YPRtle~D~~~l~~~-gvd~vF~ 95 (287)
T 3q12_A 25 KRIALVPTMGN---LHEGHMTLVDEAKTRADVVVVTIFVNPLQFERPDDLAHYPRTLQEDCEKLTRH-GADLVFA 95 (287)
T ss_dssp CCEEEEEECSS---CCHHHHHHHHHHHTTSSEEEEEECCCGGGCSSHHHHHHSCCCHHHHHHHHHHH-TCSEEEC
T ss_pred CeEEEEcCCCc---ccHHHHHHHHHHHHhCCEEEEEeccCcccCCCcchhhcCCCCHHHHHHHHHHC-CCCEEEC
Confidence 34666 7886 999999999999999999999988776411 1100 2234567777778775 8998875
No 81
>3inn_A Pantothenate synthetase; ssgcid, SBRI, UW, decode, NIH, niaid, pantoate beta alanine ligase, ATP-binding, cytoplasm, ligase; HET: ATP; 2.10A {Brucella melitensis}
Probab=95.36 E-value=0.045 Score=53.49 Aligned_cols=70 Identities=21% Similarity=0.323 Sum_probs=48.8
Q ss_pred CCCeEEE--EcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhcc--CCCCCCCCHHHHHHHHHhhcccCeeEEc
Q 014503 254 PNARVVY--IDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHR--GSYHPIMHLHERSLSVLACRYVDEVIIG 328 (423)
Q Consensus 254 ~~~~iv~--~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~K--g~~~pi~~~~ER~~~v~~~~~Vd~Vvi~ 328 (423)
.+++|++ +-|. +|.||+.++++|++.+|.+||.|.-+..=.... -..+|= ++++....+.+. .||.|+..
T Consensus 41 ~g~~IgfVPTMG~---LH~GHlsLi~~A~~~~d~vVVSIFVNP~QF~~~EDl~~YPR-tle~D~~ll~~~-GvD~vF~P 114 (314)
T 3inn_A 41 QGKKIGFVPTMGY---LHKGHLELVRRARVENDVTLVSIFVNPLQFGANEDLGRYPR-DLERDAGLLHDA-QVDYLFAP 114 (314)
T ss_dssp TTCCEEEEEECSS---CCHHHHHHHHHHHHHCSEEEEEECCCGGGSCTTSSTTTCCC-CHHHHHHHHHHT-TCSEEECC
T ss_pred cCCeEEEEcCCCc---cCHHHHHHHHHHHHhCCEEEEEECCChhhcCCCccccccCC-CHHHHHHHHHhC-CCCEEECC
Confidence 3578888 6785 999999999999999999999998654311000 011343 677777777665 48876553
No 82
>1r6x_A ATP:sulfate adenylyltransferase; APS kinase-like domain; 1.40A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5
Probab=94.84 E-value=0.4 Score=48.38 Aligned_cols=94 Identities=17% Similarity=0.170 Sum_probs=57.2
Q ss_pred eEEEEecccCcCcHHHHHHH-HHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhcCc---cccEEEe-cCCccc
Q 014503 66 VRVYMDGCFDLMHYGHANAL-RQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLK---WVDEVIA-NAPYAI 140 (423)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL-~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~---~VD~vi~-~~p~~~ 140 (423)
++|++..+++++|.||..++ +.|.+.++.|++ ++ .+-..| +-=++.+-|++..+.+- --+.++. ..|+.+
T Consensus 188 ~~VvafqtrNP~HraH~e~~~r~a~e~~~~lll--hP--lvG~tK-~~Dip~~vR~~~~~~~l~~yp~~~v~l~~~p~~m 262 (395)
T 1r6x_A 188 DRVVAFQTRNPMHRAHRELTVRAAREANAKVLI--HP--VVGLTK-PGDIDHHTRVRVYQEIIKRYPNGIAFLSLLPLAM 262 (395)
T ss_dssp CCEEEECCSSCCCHHHHHHHHHHHHHTTCEEEE--CC--BCSBCC-TTCCCHHHHHHHHHHHGGGSSTTCEEECCBCCBC
T ss_pred CcEEEeccCCCcchhhHHHHHHHHHHcCCcEEE--EE--CCCCCC-CCCCCHHHHHHHHHHHHHhCCCccEEEEecchhh
Confidence 46888999999999996555 455555664443 32 122223 23468899988877632 1223332 223322
Q ss_pred c-----HHHHHHHH-hhcCccEEEEcCCCC
Q 014503 141 T-----EQFMNRLF-NEHKIDYIIHGDDPC 164 (423)
Q Consensus 141 ~-----~efl~~ll-~~~~~d~VV~G~D~~ 164 (423)
- +..+..++ +.|+|..+++|-|..
T Consensus 263 ryAGPrEai~HAiiRkN~GcthfIVGRDhA 292 (395)
T 1r6x_A 263 RMSGDREAVWHAIIRKNYGASHFIVGRDHA 292 (395)
T ss_dssp CCCHHHHHHHHHHHHHHTTCSEEEECTTTT
T ss_pred hhcCcHHHHHHHHHHHHcCCceEEECCCCC
Confidence 1 34445544 569999999999974
No 83
>3mxt_A Pantothenate synthetase; alpha-beta-alpha, structural genomics, center for structural of infectious diseases, csgid, ligase; HET: MSE; 1.85A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3uy4_A*
Probab=94.33 E-value=0.088 Score=50.80 Aligned_cols=60 Identities=22% Similarity=0.318 Sum_probs=44.7
Q ss_pred EecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhh-hccCC--CCCCcHHHHHHHHhcCccccEEEe
Q 014503 70 MDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEI-IANKG--PPVLSMEERLALVSGLKWVDEVIA 134 (423)
Q Consensus 70 ~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i-~~~K~--~pi~t~eER~~~l~~~~~VD~vi~ 134 (423)
+.| .+|-||+.|+++|++ +|.++|.+.-+|.= .+... ...=+.++=+++++.. +||.|+.
T Consensus 32 TMG---aLH~GHlsLv~~Ar~-~d~VVVSIFVNP~QF~~~EDl~~YPRtle~D~~ll~~~-gvD~vF~ 94 (285)
T 3mxt_A 32 TMG---FLHDGHLSLVKHAKT-QDKVIVSIFVNPMQFGPNEDFSSYPRDLERDIKMCQDN-GVDMVFI 94 (285)
T ss_dssp ECS---SCCHHHHHHHHHHTT-SSEEEEEECCCGGGCCTTSCTTTSCCCHHHHHHHHHHT-TCSEEEC
T ss_pred CCC---cccHHHHHHHHHHHh-CCEEEEEeccCccccCCchhhhcCCCCHHHHHHHHHHC-CCCEEEC
Confidence 556 499999999999999 99999998877742 11111 3344677777888876 8998875
No 84
>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1g8g_A* 1g8h_A* 1j70_A 1jec_A 1jed_A* 1jee_A*
Probab=94.28 E-value=0.45 Score=49.64 Aligned_cols=94 Identities=18% Similarity=0.169 Sum_probs=58.5
Q ss_pred eEEEEecccCcCcHHHHHHH-HHHHHhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhcCc---cccEEEe-cCCccc
Q 014503 66 VRVYMDGCFDLMHYGHANAL-RQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLK---WVDEVIA-NAPYAI 140 (423)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL-~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~---~VD~vi~-~~p~~~ 140 (423)
++|++..+++++|.||..++ +.|.+.++.|++-+.- -..| +-=.+.+-|++..+.+- --+.++. ..|+.+
T Consensus 189 ~~v~afqtrnP~HraH~e~~~~~a~e~~~~lll~pl~----g~~k-~~di~~~~r~~~~~~~~~~yp~~~~~l~~~p~~m 263 (511)
T 1g8f_A 189 DRVVAFQTRNPMHRAHRELTVRAAREANAKVLIHPVV----GLTK-PGDIDHHTRVRVYQEIIKRYPNGIAFLSLLPLAM 263 (511)
T ss_dssp CCEEEEEESSCCCHHHHHHHHHHHHHHTCEEEEEEBC----SBCS-TTCCCHHHHHHHHHHHGGGSCTTSEEECCBCCBC
T ss_pred CcEEEEecCCCCchHHHHHHHHHHHHcCCcEEEEECC----CCCC-CCCCCHHHHHHHHHHHHHhCCcccEEEEecchhh
Confidence 46888999999999996554 5566657755543332 1223 23468899988877642 1122332 234432
Q ss_pred c-----HHHHHHHH-hhcCccEEEEcCCCC
Q 014503 141 T-----EQFMNRLF-NEHKIDYIIHGDDPC 164 (423)
Q Consensus 141 ~-----~efl~~ll-~~~~~d~VV~G~D~~ 164 (423)
- +..+..++ +.|+|.++++|-|..
T Consensus 264 ~yaGprea~~hai~r~n~G~th~IvGrdhA 293 (511)
T 1g8f_A 264 RMSGDREAVWHAIIRKNYGASHFIVGRDHA 293 (511)
T ss_dssp CCCHHHHHHHHHHHHHHTTCSEEECCTTTT
T ss_pred hccCcHHHHHHHHHHHhCCCceEEeCCCCC
Confidence 1 34445544 569999999999974
No 85
>3uk2_A Pantothenate synthetase; AMP, structural genomics, seattle S genomics center for infectious disease, ssgcid, ligase; HET: AMP; 2.25A {Burkholderia thailandensis} SCOP: c.26.1.0
Probab=94.13 E-value=0.12 Score=49.91 Aligned_cols=72 Identities=18% Similarity=0.261 Sum_probs=51.9
Q ss_pred CCeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhc-cCCCCCCCCHHHHHHHHHhhcccCeeEEc
Q 014503 255 NARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEH-RGSYHPIMHLHERSLSVLACRYVDEVIIG 328 (423)
Q Consensus 255 ~~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~-Kg~~~pi~~~~ER~~~v~~~~~Vd~Vvi~ 328 (423)
+++|++++ +..-+|.||..++++|++.+|.++|.+.-+..-... ..-.+...+++++...+.++ .||.|+..
T Consensus 21 g~~ig~VP-TMG~LH~GH~sLi~~A~~~~d~vVvSifvnP~qf~~~ed~~~yprt~e~d~~ll~~~-GvD~vF~P 93 (283)
T 3uk2_A 21 QNRTAFVP-TMGNLHEGHLSLMRLARQHGDPVVASIFVNRLQFGPNEDFDKYPRTLQEDIEKLQKE-NVYVLFAP 93 (283)
T ss_dssp CSSCEEEE-ECSSCCHHHHHHHHHHHTTCSSEEEEECCCGGGSCTTSCTTTSCCCHHHHHHHHHTT-TCSEEECC
T ss_pred CCeEEEEC-CCCcccHHHHHHHHHHHHhCCEEEEEEcCCHHHcCCcccccccCCCHHHHHHHHHHc-CCCEEEeC
Confidence 45666664 777899999999999999999999999766542110 00013456888888888776 48877664
No 86
>3mxt_A Pantothenate synthetase; alpha-beta-alpha, structural genomics, center for structural of infectious diseases, csgid, ligase; HET: MSE; 1.85A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3uy4_A*
Probab=94.09 E-value=0.13 Score=49.56 Aligned_cols=68 Identities=25% Similarity=0.360 Sum_probs=43.5
Q ss_pred CCCeEEEEc--CeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccC---CCCCCCCHHHHHHHHHhhcccCeeEEc
Q 014503 254 PNARVVYID--GAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRG---SYHPIMHLHERSLSVLACRYVDEVIIG 328 (423)
Q Consensus 254 ~~~~iv~~~--G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg---~~~pi~~~~ER~~~v~~~~~Vd~Vvi~ 328 (423)
.+++|++++ |. +|.||++++++|++ +|.+||.|.-+..=.. .+ ..+|= ++++=...+.+. .||.|+..
T Consensus 23 ~g~~Ig~VPTMGa---LH~GHlsLv~~Ar~-~d~VVVSIFVNP~QF~-~~EDl~~YPR-tle~D~~ll~~~-gvD~vF~P 95 (285)
T 3mxt_A 23 HQLSIGYVPTMGF---LHDGHLSLVKHAKT-QDKVIVSIFVNPMQFG-PNEDFSSYPR-DLERDIKMCQDN-GVDMVFIP 95 (285)
T ss_dssp TTCCEEEEEECSS---CCHHHHHHHHHHTT-SSEEEEEECCCGGGCC-TTSCTTTSCC-CHHHHHHHHHHT-TCSEEECC
T ss_pred cCCeEEEEcCCCc---ccHHHHHHHHHHHh-CCEEEEEeccCccccC-CchhhhcCCC-CHHHHHHHHHHC-CCCEEECC
Confidence 356777744 65 99999999999999 9999999975532100 00 01343 444444545444 58866653
No 87
>3n8h_A Pantothenate synthetase; alpha-beta sandwich, ligase, structural genomics, structural of infectious diseases; HET: MSE AMP GOL; 2.00A {Francisella tularensis subsp} PDB: 3qtt_A*
Probab=93.40 E-value=0.12 Score=49.25 Aligned_cols=67 Identities=15% Similarity=0.289 Sum_probs=47.2
Q ss_pred EEEEecccCcCcHHHHHHHHHHHHhcCeeEEEEecchhhh-ccCC--CCCCcHHHHHHHHhcCccccEEEe
Q 014503 67 RVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEII-ANKG--PPVLSMEERLALVSGLKWVDEVIA 134 (423)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~-~~K~--~pi~t~eER~~~l~~~~~VD~vi~ 134 (423)
+|-+.-+--.+|-||+.|+++|++.+|.++|.+.-+|.=. +... ...=+.++=+++++.. +||.|+.
T Consensus 25 ~ig~VPTMGaLH~GHlsLv~~Ar~~~d~vVVSIFVNP~QF~~~EDl~~YPRtle~D~~ll~~~-gvD~vF~ 94 (264)
T 3n8h_A 25 KIGFVPTMGALHNGHISLIKKAKSENDVVIVSIFVNPTQFNNPNDYQTYPNQLQQDIQILASL-DVDVLFN 94 (264)
T ss_dssp CEEEEEECSSCCHHHHHHHHHHHHHCSEEEEEECCCGGGCSCHHHHHHSCCCHHHHHHHHHHT-TCSEEEC
T ss_pred cEEEECCCcchhHHHHHHHHHHHHhCCEEEEEEccCcccCCCcchhhcCCCCHHHHHHHHHHC-CCCEEEC
Confidence 4555556668999999999999999999999988776411 1000 1233566667777775 8887775
No 88
>3n8h_A Pantothenate synthetase; alpha-beta sandwich, ligase, structural genomics, structural of infectious diseases; HET: MSE AMP GOL; 2.00A {Francisella tularensis subsp} PDB: 3qtt_A*
Probab=92.27 E-value=0.099 Score=49.82 Aligned_cols=68 Identities=19% Similarity=0.353 Sum_probs=44.7
Q ss_pred CCCCeEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecCh-------hhhhccCCCCCCCCHHHHHHHHHhhcccCee
Q 014503 253 GPNARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQ-------IVSEHRGSYHPIMHLHERSLSVLACRYVDEV 325 (423)
Q Consensus 253 ~~~~~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~-------~v~~~Kg~~~pi~~~~ER~~~v~~~~~Vd~V 325 (423)
..+++|++++ +-=-+|.||++++++|++.+|.+||.|.-+. +..+ +|= ++++=...+.+. .||.|
T Consensus 21 ~~g~~ig~VP-TMGaLH~GHlsLv~~Ar~~~d~vVVSIFVNP~QF~~~EDl~~-----YPR-tle~D~~ll~~~-gvD~v 92 (264)
T 3n8h_A 21 IKQQKIGFVP-TMGALHNGHISLIKKAKSENDVVIVSIFVNPTQFNNPNDYQT-----YPN-QLQQDIQILASL-DVDVL 92 (264)
T ss_dssp CTTSCEEEEE-ECSSCCHHHHHHHHHHHHHCSEEEEEECCCGGGCSCHHHHHH-----SCC-CHHHHHHHHHHT-TCSEE
T ss_pred hCCCcEEEEC-CCcchhHHHHHHHHHHHHhCCEEEEEEccCcccCCCcchhhc-----CCC-CHHHHHHHHHHC-CCCEE
Confidence 3456777766 2226899999999999999999999998543 2222 232 344334444443 58866
Q ss_pred EEc
Q 014503 326 IIG 328 (423)
Q Consensus 326 vi~ 328 (423)
+..
T Consensus 93 F~P 95 (264)
T 3n8h_A 93 FNP 95 (264)
T ss_dssp ECC
T ss_pred ECC
Confidence 653
No 89
>1v47_A ATP sulfurylase; product binding complex, zinc, riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; HET: ADX; 2.49A {Thermus thermophilus} SCOP: b.122.1.3 c.26.1.5
Probab=92.13 E-value=0.23 Score=49.34 Aligned_cols=90 Identities=14% Similarity=0.049 Sum_probs=58.7
Q ss_pred eEEEEcCeeccCCHHHHHHHHHHHhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhh-ccc-Ce--eEEc-CCC
Q 014503 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLAC-RYV-DE--VIIG-APW 331 (423)
Q Consensus 257 ~iv~~~G~FDl~H~GHi~~L~~A~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~-~~V-d~--Vvi~-~p~ 331 (423)
+.|+.-|+|||+|.||..+.++|.+.+|.|++--.-. ..| .--.+.+-|+.+++.+ +.. +. |++. .|.
T Consensus 156 ~~VvafqTrNPiHrgH~~l~~~ale~~d~vll~P~~g----~~K---~~d~~~~~R~~~~~~~i~~~~p~~~~~l~~~p~ 228 (349)
T 1v47_A 156 RKVVAFQTRNAPHRAHEYLIRLGLELADGVLVHPILG----AKK---PDDFPTEVIVEAYQALIRDFLPQERVAFFGLAT 228 (349)
T ss_dssp CSEEEEEESSCCCHHHHHHHHHHHHHSSEEEEEEBCS----CCC---TTSCCHHHHHHHHHHHHHHHSCGGGEEECCBCS
T ss_pred CeEEEeecCCCCchHHHHHHHHHHHhCCcEEEEECCC----CCC---CCCCCHHHHHHHHHHHHhhcCCCcceEEEechH
Confidence 3455689999999999999999999999877654422 223 2347999999888764 322 32 4431 121
Q ss_pred C-----chHH----HH-hhcCccEEEecCCcC
Q 014503 332 E-----VTKD----MI-TTFNICLVVHGTVSE 353 (423)
Q Consensus 332 ~-----~~~~----~i-~~~~~d~vv~G~d~~ 353 (423)
. .... ++ +.+++..++-|.|..
T Consensus 229 ~m~~aGPreailhaiirkn~G~t~fIVGrDha 260 (349)
T 1v47_A 229 PMRYAGPKEAVFHALVRKNFGATHFLVGRDHA 260 (349)
T ss_dssp CCCCCTHHHHHHHHHHHHHTTCSEEEECTTTT
T ss_pred HhhcCCcHHHHHHHHHHHcCCCcEEEECcCCC
Confidence 1 1111 12 335888999998864
No 90
>1jhd_A Sulfate adenylyltransferase; sulfurylase, APS, chemoautotroph, bromide; 1.70A {Sulfur-oxidizing endosymbiont ofriftia pachyptila} SCOP: b.122.1.3 c.26.1.5
Probab=91.89 E-value=0.2 Score=50.69 Aligned_cols=90 Identities=12% Similarity=0.094 Sum_probs=56.9
Q ss_pred eEEEEcCeeccCCHHHHHHHHHHHhcC--CEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhh-ccc-C--eeEE---
Q 014503 257 RVVYIDGAFDLFHAGHVEILKKARQLG--DFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLAC-RYV-D--EVII--- 327 (423)
Q Consensus 257 ~iv~~~G~FDl~H~GHi~~L~~A~~~g--d~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~-~~V-d--~Vvi--- 327 (423)
+.|+..|+|||+|.||..+.+.|.+.. |.|++--.-. ..| .--.+.+.|+.+++.+ +.. + .|++
T Consensus 193 ~~VvafqTrNPiHrgH~~l~~~Ale~~~~D~vll~P~~g----~~K---~~di~~~~R~~~~~~~~~~~~p~~~v~l~~~ 265 (396)
T 1jhd_A 193 SKVVAFQTRNPMHRAHEELCRMAMESLDADGVVVHMLLG----KLK---KGDIPAPVRDAAIRTMAEVYFPPNTVMVTGY 265 (396)
T ss_dssp SSEEEEEESSCCCHHHHHHHHHHHHHHTCSEEEEEEEEC----CCC---TTCCCHHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred ceEEEeccCCCCchHHHHHHHHHHHHcCCCeEEEEECCC----CCC---CCCCCHHHHHHHHHHHHHhcCCCcceEEEec
Confidence 446669999999999999999999877 7665443322 123 1347899999887664 322 2 2332
Q ss_pred cCCC---CchHHH----H-hhcCccEEEecCCcC
Q 014503 328 GAPW---EVTKDM----I-TTFNICLVVHGTVSE 353 (423)
Q Consensus 328 ~~p~---~~~~~~----i-~~~~~d~vv~G~d~~ 353 (423)
..+. ..+..+ + +.+++..++-|.|..
T Consensus 266 p~~m~~aGPreailhaiirkn~G~t~fIVGrDha 299 (396)
T 1jhd_A 266 GFDMLYAGPREAVLHAYFRQNMGATHFIIGRDHA 299 (396)
T ss_dssp ECCCCCCTHHHHHHHHHHHHHTTCSEEEECTTTT
T ss_pred hHHhhcCCchHHHHHHHHHHcCCCcEEEECCCCC
Confidence 1111 122221 2 335888999998874
No 91
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A*
Probab=90.11 E-value=0.88 Score=48.05 Aligned_cols=94 Identities=18% Similarity=0.108 Sum_probs=58.5
Q ss_pred eEEEEecccCcCcHHHHHHHHHHHHh-cCeeEEEEecchhhhccCCCCCCcHHHHHHHHhcCc---cccEEEe-cCCcc-
Q 014503 66 VRVYMDGCFDLMHYGHANALRQAKAL-GDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLK---WVDEVIA-NAPYA- 139 (423)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~~-~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~---~VD~vi~-~~p~~- 139 (423)
++|++.=+++++|.||..++++|... ++.|+|-+.- -..| +-=.+.+-|++.++.+- --+.++. ..|..
T Consensus 191 ~~v~afqtrnP~Hr~H~~l~~~a~~~~~~~llv~pl~----g~~k-~~di~~~~R~~~~~~~~~~~p~~~v~l~~~p~~m 265 (573)
T 1m8p_A 191 SRVVAFQTRNPMHRAHRELTVRAARSRQANVLIHPVV----GLTK-PGDIDHFTRVRAYQALLPRYPNGMAVLGLLGLAM 265 (573)
T ss_dssp CSEEEECCSSCCCHHHHHHHHHHHHHTTCEEEECCBC----CCCC-TTCHHHHHHHHHHHHHGGGSSTTSEEECBBCCCC
T ss_pred CeEEEEeeCCCcchhhHHHHHHHHHhcCCcEEEEeCC----CCCC-CCCCCHHHHHHHHHHHHHhCCCCcEEEEecCchh
Confidence 45788899999999999999998866 7755553211 1122 23457888998887631 1133333 12322
Q ss_pred -cc---HHHHHHH-HhhcCccEEEEcCCCC
Q 014503 140 -IT---EQFMNRL-FNEHKIDYIIHGDDPC 164 (423)
Q Consensus 140 -~~---~efl~~l-l~~~~~d~VV~G~D~~ 164 (423)
+. +..+..+ .+.++|..+++|-|+.
T Consensus 266 ~~agprea~~ha~ir~n~G~th~ivgrdha 295 (573)
T 1m8p_A 266 RMGGPREAIWHAIIRKNHGATHFIVGRDHA 295 (573)
T ss_dssp CCCHHHHHHHHHHHHHHHTCSEEEECTTTT
T ss_pred hccCchHHHHHHHHHHHCCCCeEEECCCCC
Confidence 11 2233443 3578999999998753
No 92
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus}
Probab=89.15 E-value=1.4 Score=46.17 Aligned_cols=94 Identities=19% Similarity=0.189 Sum_probs=59.9
Q ss_pred eEEEEecccCcCcHHHHHHHHHHHH-hcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhcCc----cccEEEe-cCCcc
Q 014503 66 VRVYMDGCFDLMHYGHANALRQAKA-LGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLK----WVDEVIA-NAPYA 139 (423)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~-~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~----~VD~vi~-~~p~~ 139 (423)
++|++.=+++++|.||..++++|.. .++.|+|-+.- -..| +-=.+.+-|++.++.+- --+.++. ..|..
T Consensus 164 ~~v~afqtrnP~Hr~H~~l~~~a~~~~~~~llv~p~~----g~~k-~~di~~~~R~~~~~~~~~~~~p~~~v~~~~~p~~ 238 (546)
T 2gks_A 164 DKIVAFQTRNPMHRVHEELTKRAMEKVGGGLLLHPVV----GLTK-PGDVDVYTRMRIYKVLYEKYYDKKKTILAFLPLA 238 (546)
T ss_dssp SCEEEECCSSCCCHHHHHHHHHHHHHHTSEEEECCBC----SBCC-TTSCCHHHHHHHHHHHHHHHSCTTTEEECBBCCB
T ss_pred CcEEEEecCCCCcHHHHHHHHHHHHhcCCcEEEEeCc----CCCC-CCCCCHHHHHHHHHHHHHhcCCCCcEEEeecCch
Confidence 4688899999999999999999986 57766553222 1223 23468899998887641 1122332 22322
Q ss_pred cc-----HHHHHHHH-hhcCccEEEEcCCCC
Q 014503 140 IT-----EQFMNRLF-NEHKIDYIIHGDDPC 164 (423)
Q Consensus 140 ~~-----~efl~~ll-~~~~~d~VV~G~D~~ 164 (423)
.. +.-+..++ +.++|..+++|-|..
T Consensus 239 m~~agprea~~ha~ir~n~G~th~ivgrdha 269 (546)
T 2gks_A 239 MRMAGPREALWHGIIRRNYGATHFIVGRDHA 269 (546)
T ss_dssp CCCCTHHHHHHHHHHHHHTTCSEEEECTTTT
T ss_pred hhccCchHHHHHHHHHHhCCCCeEEECCCCC
Confidence 11 23344444 579999999998763
No 93
>1x6v_B Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthethase 1; transferase, ATP sulfurylase, APS kinase, PAPS; HET: ADP; 1.75A {Homo sapiens} SCOP: b.122.1.3 c.26.1.5 c.37.1.4 PDB: 1xjq_B* 1xnj_B* 2qjf_A* 2ofx_A* 2ofw_A*
Probab=85.49 E-value=11 Score=40.30 Aligned_cols=97 Identities=15% Similarity=0.055 Sum_probs=59.4
Q ss_pred CeEEEEecccCcCcHHHHHHHHHHHH-hcCe----eEEEEecchhhhccCCCCCCcHHHHHHHHhcCc-----cccEEEe
Q 014503 65 RVRVYMDGCFDLMHYGHANALRQAKA-LGDE----LVVGVVSDEEIIANKGPPVLSMEERLALVSGLK-----WVDEVIA 134 (423)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~-~~d~----LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~-----~VD~vi~ 134 (423)
-++|++.=+-+++|.||..|++.|.+ .++. -.+-+|+ .+-..| +-=++.+-|++-.+.+- --+.++.
T Consensus 412 w~~VvafqtrNP~HraHe~l~~~a~~~~~d~g~~~~~lll~p--l~G~tk-~~di~~~~r~~~~~~~~~~~y~p~~~~~l 488 (630)
T 1x6v_B 412 ADAVSAFQLRNPVHNGHALLMQDTHKQLLERGYRRPVLLLHP--LGGWTK-DDDVPLMWRMKQHAAVLEEGVLNPETTVV 488 (630)
T ss_dssp CSEEEEEEESSCCCHHHHHHHHHHHHHHHHHTCSSEEEEEEE--BCSCCC-TTSCCHHHHHHHHHHHHHTTSSCGGGEEE
T ss_pred CCeEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCcEEEEe--CcCCCC-CCCCCHHHHHHHHHHHHHcCCCCCcceEE
Confidence 34788888999999999999999986 3441 1122333 121222 33567888888776531 1233443
Q ss_pred -cCCcccc-----HHHHHHHH-hhcCccEEEEcCCCC
Q 014503 135 -NAPYAIT-----EQFMNRLF-NEHKIDYIIHGDDPC 164 (423)
Q Consensus 135 -~~p~~~~-----~efl~~ll-~~~~~d~VV~G~D~~ 164 (423)
..|+.+- +..+..++ +.++|..+++|-|..
T Consensus 489 ~~~p~~mryaGPrEa~~hai~rkN~Gcth~IVGrdhA 525 (630)
T 1x6v_B 489 AIFPSPMMYAGPTEVQWHCRARMVAGANFYIVGRDPA 525 (630)
T ss_dssp CCBCCCCCCCHHHHHHHHHHHHHHTTCSEEEECSSTT
T ss_pred eeccchhhhcCcHHHHHHHHHHHhCCCCeEEECCCCC
Confidence 1232221 34455544 569999999999974
No 94
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans}
Probab=83.02 E-value=7 Score=41.00 Aligned_cols=94 Identities=7% Similarity=0.021 Sum_probs=55.3
Q ss_pred eEEEEecccCcCcHHHHHHHHHHH-HhcCeeEEEEecchhhhccCCCCCCcHHHHHHHHhcCc---cccEEEe-cCCccc
Q 014503 66 VRVYMDGCFDLMHYGHANALRQAK-ALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLK---WVDEVIA-NAPYAI 140 (423)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~-~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~---~VD~vi~-~~p~~~ 140 (423)
++|++.=+-+++|.||..++++|. +.++.|++ ++ .+-..| +-=++.+-|++-.+.+. --+.++. -.|+.+
T Consensus 164 ~~v~afqtrnp~Hrah~~~~~~~~~~~~~~lll--~p--l~g~~k-~~d~~~~~r~~~~~~~~~~~p~~~~~l~~~p~~m 238 (552)
T 3cr8_A 164 RRIIAWQARQPMHRAQYEFCLKSAIENEANLLL--HP--QVGGDI-TEAPAYFGLVRSFLAIRDRFPAATTQLSLLPAPP 238 (552)
T ss_dssp CSEEEECCSSCCCHHHHHHHHHHHHHTTCEEEE--CC--BCCCCT-TTCTTHHHHHHHHHHHGGGSCGGGEEECBBCSCC
T ss_pred CceEEEecCCCCchHHHHHHHHHHHhcCCeEEE--Ee--ccCCCC-CCCCCHHHHHHHHHHHHHhCCCccEEEeecchhh
Confidence 457888999999999999999998 66664443 33 122222 33567788887776531 1223332 233322
Q ss_pred c-----HHHHHHHH-hhcCccEEEEcCCCC
Q 014503 141 T-----EQFMNRLF-NEHKIDYIIHGDDPC 164 (423)
Q Consensus 141 ~-----~efl~~ll-~~~~~d~VV~G~D~~ 164 (423)
- +.-+..++ +.|+|..+++|-|..
T Consensus 239 ~~agprea~~ha~~r~n~G~th~ivGrdha 268 (552)
T 3cr8_A 239 PEASGRALLLRAIVARNFGCSLLIAGGEHQ 268 (552)
T ss_dssp CCSCSHHHHHHHHHHHHHTCSEEEC-----
T ss_pred cccCcHHHHHHHHHHHhCCCCeeeeCCCCC
Confidence 1 34455544 569999999999864
No 95
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus}
Probab=38.63 E-value=23 Score=36.88 Aligned_cols=55 Identities=16% Similarity=0.059 Sum_probs=39.3
Q ss_pred EEEEcCeeccCCHHHHHHHHHHHh-cCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhh
Q 014503 258 VVYIDGAFDLFHAGHVEILKKARQ-LGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLAC 319 (423)
Q Consensus 258 iv~~~G~FDl~H~GHi~~L~~A~~-~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~ 319 (423)
.|+--=++.|+|.||..++++|.. .+|.|+|-...- ..|. .=++.+-|+...+.+
T Consensus 165 ~v~afqtrnP~Hr~H~~l~~~a~~~~~~~llv~p~~g----~~k~---~di~~~~R~~~~~~~ 220 (546)
T 2gks_A 165 KIVAFQTRNPMHRVHEELTKRAMEKVGGGLLLHPVVG----LTKP---GDVDVYTRMRIYKVL 220 (546)
T ss_dssp CEEEECCSSCCCHHHHHHHHHHHHHHTSEEEECCBCS----BCCT---TSCCHHHHHHHHHHH
T ss_pred cEEEEecCCCCcHHHHHHHHHHHHhcCCcEEEEeCcC----CCCC---CCCCHHHHHHHHHHH
Confidence 355577899999999999998885 788776643322 1222 236889999887776
No 96
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A*
Probab=35.33 E-value=28 Score=36.54 Aligned_cols=87 Identities=14% Similarity=0.110 Sum_probs=52.4
Q ss_pred EEEcCeeccCCHHHHHHHHHHHh-cCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhh--ccc-CeeEEc-CCCC-
Q 014503 259 VYIDGAFDLFHAGHVEILKKARQ-LGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLAC--RYV-DEVIIG-APWE- 332 (423)
Q Consensus 259 v~~~G~FDl~H~GHi~~L~~A~~-~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~--~~V-d~Vvi~-~p~~- 332 (423)
|+.-=+++|+|.||..++++|.. .||.|+|-...- ..|. -=++.+-|+...+.+ .|- +.|++. .|..
T Consensus 193 v~afqtrnP~Hr~H~~l~~~a~~~~~~~llv~pl~g----~~k~---~di~~~~R~~~~~~~~~~~p~~~v~l~~~p~~m 265 (573)
T 1m8p_A 193 VVAFQTRNPMHRAHRELTVRAARSRQANVLIHPVVG----LTKP---GDIDHFTRVRAYQALLPRYPNGMAVLGLLGLAM 265 (573)
T ss_dssp EEEECCSSCCCHHHHHHHHHHHHHTTCEEEECCBCC----CCCT---TCHHHHHHHHHHHHHGGGSSTTSEEECBBCCCC
T ss_pred EEEEeeCCCcchhhHHHHHHHHHhcCCcEEEEeCCC----CCCC---CCCCHHHHHHHHHHHHHhCCCCcEEEEecCchh
Confidence 55577899999999999998884 488766643211 1121 225888899888776 332 234443 1211
Q ss_pred ---chHH------HHhhcCccEEEecCCc
Q 014503 333 ---VTKD------MITTFNICLVVHGTVS 352 (423)
Q Consensus 333 ---~~~~------~i~~~~~d~vv~G~d~ 352 (423)
-+.+ +-+.+++..++-|.|.
T Consensus 266 ~~agprea~~ha~ir~n~G~th~ivgrdh 294 (573)
T 1m8p_A 266 RMGGPREAIWHAIIRKNHGATHFIVGRDH 294 (573)
T ss_dssp CCCHHHHHHHHHHHHHHHTCSEEEECTTT
T ss_pred hccCchHHHHHHHHHHHCCCCeEEECCCC
Confidence 1221 2344688877778654
No 97
>1r6x_A ATP:sulfate adenylyltransferase; APS kinase-like domain; 1.40A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5
Probab=30.12 E-value=46 Score=33.30 Aligned_cols=91 Identities=15% Similarity=0.160 Sum_probs=53.3
Q ss_pred eEEEEcCeeccCCHHHHHHHHHH-HhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhhc--cc-CeeEEcC-CC
Q 014503 257 RVVYIDGAFDLFHAGHVEILKKA-RQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACR--YV-DEVIIGA-PW 331 (423)
Q Consensus 257 ~iv~~~G~FDl~H~GHi~~L~~A-~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~~--~V-d~Vvi~~-p~ 331 (423)
+.|+.-.+++|+|.||.+++.+| .+.+|-|+|--. +-..|. -=++.+-|+.+.+++- |. +.|++.. |.
T Consensus 188 ~~VvafqtrNP~HraH~e~~~r~a~e~~~~lllhPl----vG~tK~---~Dip~~vR~~~~~~~l~~yp~~~v~l~~~p~ 260 (395)
T 1r6x_A 188 DRVVAFQTRNPMHRAHRELTVRAAREANAKVLIHPV----VGLTKP---GDIDHHTRVRVYQEIIKRYPNGIAFLSLLPL 260 (395)
T ss_dssp CCEEEECCSSCCCHHHHHHHHHHHHHTTCEEEECCB----CSBCCT---TCCCHHHHHHHHHHHGGGSSTTCEEECCBCC
T ss_pred CcEEEeccCCCcchhhHHHHHHHHHHcCCcEEEEEC----CCCCCC---CCCCHHHHHHHHHHHHHhCCCccEEEEecch
Confidence 34666889999999997666655 466775443221 112232 1268999998777763 32 2344321 11
Q ss_pred C----chHH-----HHh-hcCccEEEecCCcCC
Q 014503 332 E----VTKD-----MIT-TFNICLVVHGTVSET 354 (423)
Q Consensus 332 ~----~~~~-----~i~-~~~~d~vv~G~d~~~ 354 (423)
. -+.+ .++ .++++.++-|.|...
T Consensus 261 ~mryAGPrEai~HAiiRkN~GcthfIVGRDhAG 293 (395)
T 1r6x_A 261 AMRMSGDREAVWHAIIRKNYGASHFIVGRDHAG 293 (395)
T ss_dssp BCCCCHHHHHHHHHHHHHHTTCSEEEECTTTTC
T ss_pred hhhhcCcHHHHHHHHHHHHcCCceEEECCCCCC
Confidence 1 1112 233 479999999987644
No 98
>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1g8g_A* 1g8h_A* 1j70_A 1jec_A 1jed_A* 1jee_A*
Probab=20.88 E-value=67 Score=33.18 Aligned_cols=91 Identities=14% Similarity=0.146 Sum_probs=53.8
Q ss_pred eEEEEcCeeccCCHHHHHHHHHH-HhcCCEEEEEEecChhhhhccCCCCCCCCHHHHHHHHHhhc--cc-CeeEEc-CCC
Q 014503 257 RVVYIDGAFDLFHAGHVEILKKA-RQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACR--YV-DEVIIG-APW 331 (423)
Q Consensus 257 ~iv~~~G~FDl~H~GHi~~L~~A-~~~gd~LiVgv~~D~~v~~~Kg~~~pi~~~~ER~~~v~~~~--~V-d~Vvi~-~p~ 331 (423)
+.|+--.+++|+|.||.+++.++ .+.+|-|+|--.-- ..|. -=++.+-|+.+.+.+- |. +.|++. -|.
T Consensus 189 ~~v~afqtrnP~HraH~e~~~~~a~e~~~~lll~pl~g----~~k~---~di~~~~r~~~~~~~~~~yp~~~~~l~~~p~ 261 (511)
T 1g8f_A 189 DRVVAFQTRNPMHRAHRELTVRAAREANAKVLIHPVVG----LTKP---GDIDHHTRVRVYQEIIKRYPNGIAFLSLLPL 261 (511)
T ss_dssp CCEEEEEESSCCCHHHHHHHHHHHHHHTCEEEEEEBCS----BCST---TCCCHHHHHHHHHHHGGGSCTTSEEECCBCC
T ss_pred CcEEEEecCCCCchHHHHHHHHHHHHcCCcEEEEECCC----CCCC---CCCCHHHHHHHHHHHHHhCCcccEEEEecch
Confidence 34666789999999997776654 46577554432211 2232 1268999998887763 42 234441 122
Q ss_pred C----chHH-----HHh-hcCccEEEecCCcCC
Q 014503 332 E----VTKD-----MIT-TFNICLVVHGTVSET 354 (423)
Q Consensus 332 ~----~~~~-----~i~-~~~~d~vv~G~d~~~ 354 (423)
. -+.+ .++ .++++.++-|.|...
T Consensus 262 ~m~yaGprea~~hai~r~n~G~th~IvGrdhAg 294 (511)
T 1g8f_A 262 AMRMSGDREAVWHAIIRKNYGASHFIVGRDHAG 294 (511)
T ss_dssp BCCCCHHHHHHHHHHHHHHTTCSEEECCTTTTC
T ss_pred hhhccCcHHHHHHHHHHHhCCCceEEeCCCCCC
Confidence 1 1112 233 479999999987644
Done!